Miyakogusa Predicted Gene
- Lj6g3v0714560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0714560.1 Non Chatacterized Hit- tr|A5BDK1|A5BDK1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.77,0.00006,no description,Zinc finger, RING/FYVE/PHD-type;
seg,NULL; RING FINGER PROTEIN 6/12/38,NULL; zf-RING_,CUFF.58589.1
(338 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 395 e-110
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 395 e-110
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 375 e-104
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 375 e-104
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 154 1e-37
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 152 3e-37
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 108 5e-24
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 107 1e-23
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 103 1e-22
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 103 2e-22
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 102 3e-22
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 98 7e-21
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 92 7e-19
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 63 2e-10
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 3e-10
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 4e-10
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 62 5e-10
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 2e-09
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 5e-09
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 5e-09
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 59 5e-09
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 59 6e-09
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 6e-09
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 6e-09
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 58 7e-09
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 9e-09
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 9e-09
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 9e-09
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 9e-09
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 1e-08
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 1e-08
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 1e-08
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 1e-08
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 1e-08
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 1e-08
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 1e-08
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 1e-08
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 2e-08
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 2e-08
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 2e-08
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 2e-08
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 57 3e-08
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 3e-08
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 56 3e-08
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 56 3e-08
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 3e-08
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 56 4e-08
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 56 4e-08
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 4e-08
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 56 4e-08
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 5e-08
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 5e-08
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 55 5e-08
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 55 5e-08
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 55 6e-08
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 55 6e-08
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 6e-08
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 55 7e-08
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 55 7e-08
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 7e-08
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 55 7e-08
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 55 7e-08
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 9e-08
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 9e-08
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 54 1e-07
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 54 1e-07
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 1e-07
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 54 1e-07
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 2e-07
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G15590.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 3e-07
AT1G15590.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 53 3e-07
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 53 4e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 52 4e-07
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 4e-07
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 4e-07
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 4e-07
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 4e-07
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 52 5e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 5e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 52 5e-07
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 6e-07
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 7e-07
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 7e-07
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 7e-07
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 52 7e-07
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 52 8e-07
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 8e-07
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 8e-07
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 51 1e-06
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 1e-06
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 51 1e-06
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 1e-06
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 1e-06
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 51 1e-06
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 1e-06
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 2e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 2e-06
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT3G51325.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 50 2e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 50 3e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 50 3e-06
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 50 3e-06
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 49 3e-06
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 4e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 49 5e-06
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 8e-06
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 8e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 48 8e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 48 8e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 8e-06
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 9e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 9e-06
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 1e-05
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/304 (65%), Positives = 222/304 (73%), Gaps = 9/304 (2%)
Query: 38 SSPSIMTRVAMRASRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALMVQITS 97
S S R+AM+ SR+RWF FLRRVFHYQNG RSDLGSNPFNSSTWMM ELIAL+VQ+T
Sbjct: 46 SPSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTV 105
Query: 98 TTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVTHDG---LSDMEQQSN 154
TFTLAISK E+PIWP+R+WI GYD+GC+LNL+LL GRY QL + L D+EQQ
Sbjct: 106 ITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQR 165
Query: 155 NEETSVYRSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWN 214
E + RSS LM KCR+SLELFFAIWFV+GNVW FDSRFGSF APKL +LC+ LLAWN
Sbjct: 166 GREET--RSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWN 223
Query: 215 AICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDL 274
AICY GYNMNMGSS R AS+DQIS L SWKFK +D
Sbjct: 224 AICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFK----RIDD 279
Query: 275 SNDDPQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQ 334
S D S + +DPECCICLAKYKDKEEVR+LPCSH FH KCVDQWL+IISCCPLCKQ
Sbjct: 280 SASDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQ 339
Query: 335 GLQR 338
L R
Sbjct: 340 DLPR 343
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/304 (65%), Positives = 222/304 (73%), Gaps = 9/304 (2%)
Query: 38 SSPSIMTRVAMRASRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALMVQITS 97
S S R+AM+ SR+RWF FLRRVFHYQNG RSDLGSNPFNSSTWMM ELIAL+VQ+T
Sbjct: 46 SPSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTV 105
Query: 98 TTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVTHDG---LSDMEQQSN 154
TFTLAISK E+PIWP+R+WI GYD+GC+LNL+LL GRY QL + L D+EQQ
Sbjct: 106 ITFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQR 165
Query: 155 NEETSVYRSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWN 214
E + RSS LM KCR+SLELFFAIWFV+GNVW FDSRFGSF APKL +LC+ LLAWN
Sbjct: 166 GREET--RSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWN 223
Query: 215 AICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDL 274
AICY GYNMNMGSS R AS+DQIS L SWKFK +D
Sbjct: 224 AICYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFK----RIDD 279
Query: 275 SNDDPQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQ 334
S D S + +DPECCICLAKYKDKEEVR+LPCSH FH KCVDQWL+IISCCPLCKQ
Sbjct: 280 SASDSDSDSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQ 339
Query: 335 GLQR 338
L R
Sbjct: 340 DLPR 343
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 217/295 (73%), Gaps = 13/295 (4%)
Query: 45 RVAMRASRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALMVQITSTTFTLAI 104
R+AMR SR+RWF FLRRVFHYQN RSDLG+NPFNS WM+ ELIAL++QIT T TLA+
Sbjct: 49 RLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLAL 108
Query: 105 SKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVTHD---GLSDMEQQSNNEETSVY 161
SK+E+P+WPMR+WI GY++GC+LNL+LL GRY Q +H+ D+EQQ + E +
Sbjct: 109 SKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETT- 167
Query: 162 RSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWNAICYXXX 221
R S LM KCR+SLELFFAIWFV+GNVW FDSRFGSF AP L +LCI LLAWNA+CY
Sbjct: 168 RCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFP 227
Query: 222 XXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQS 281
GYNMN+GSS +GAS+DQIS L SWK+K +D ++D Q+
Sbjct: 228 FLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKL----IDETSDSSQA 283
Query: 282 SERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
N DPECCICLAKYK+KEEVR+LPCSH FH KCVDQWL+IISCCPLCKQ L
Sbjct: 284 -----NNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 217/295 (73%), Gaps = 13/295 (4%)
Query: 45 RVAMRASRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALMVQITSTTFTLAI 104
R+AMR SR+RWF FLRRVFHYQN RSDLG+NPFNS WM+ ELIAL++QIT T TLA+
Sbjct: 49 RLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLAL 108
Query: 105 SKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVTHD---GLSDMEQQSNNEETSVY 161
SK+E+P+WPMR+WI GY++GC+LNL+LL GRY Q +H+ D+EQQ + E +
Sbjct: 109 SKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETT- 167
Query: 162 RSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWNAICYXXX 221
R S LM KCR+SLELFFAIWFV+GNVW FDSRFGSF AP L +LCI LLAWNA+CY
Sbjct: 168 RCSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFP 227
Query: 222 XXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQS 281
GYNMN+GSS +GAS+DQIS L SWK+K +D ++D Q+
Sbjct: 228 FLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKL----IDETSDSSQA 283
Query: 282 SERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
N DPECCICLAKYK+KEEVR+LPCSH FH KCVDQWL+IISCCPLCKQ L
Sbjct: 284 -----NNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 149/310 (48%), Gaps = 48/310 (15%)
Query: 67 NGPRSDLGSNPFNSSTWMMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCV 126
NG R+ +P NS W+ +EL+ + QI + + ++K E P P+ W+ GY GC+
Sbjct: 92 NGRRT---RSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 148
Query: 127 LNLLLLCGRYH-----------QLHVTHDGLSD--------MEQQSNNEETSVYRSSP-- 165
L +L R+ Q + G S+ + Q ++ E ++ ++P
Sbjct: 149 ATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRN 208
Query: 166 -------------LMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLA 212
L+ + +++ FFA+WFV+GNVW F S +PKL LCI L
Sbjct: 209 NQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLT 267
Query: 213 WNAICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHAN- 271
++ I Y G+ N S RGA+ + I+ L ++FK+ N
Sbjct: 268 FSCIGYAMPFILCATICCCLPCLISVLGFRENF-SQTRGATAEAINALPVYRFKSKSRND 326
Query: 272 LDLSNDDP-------QSSERLIN-EDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWL 323
L+ S + +RLI+ ED CCICL +Y D E+VR+LPCSH+FH CVD+WL
Sbjct: 327 LEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWL 386
Query: 324 KIISCCPLCK 333
KI + CPLCK
Sbjct: 387 KINATCPLCK 396
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 138/300 (46%), Gaps = 46/300 (15%)
Query: 78 FNSSTWMMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYH 137
NS W+ +EL + QI + L++SK E P P+ WI GY GCV L LL RY+
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 138 Q------------------------LHVTHDGLSDMEQQSNNEE--------TSVYRSSP 165
++ +D Q + S R
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKV 226
Query: 166 LMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWNAICYXXXXXXX 225
++ + +L+ FFA+WFV+GNVW F S +AP L LC++ L ++ I Y
Sbjct: 227 IVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILC 285
Query: 226 XXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERL 285
GY ++ + RGA+ + I+ L + KFK + + ++ +SE
Sbjct: 286 TTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGG 344
Query: 286 I------------NEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+ ED CCICLAKY + EE+R+LPCSH FH++CVD+WLKI + CPLCK
Sbjct: 345 VVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 32/281 (11%)
Query: 84 MMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVT- 142
++L+++ + + + L S E P P+R+WI GY++ C+ ++ + Y + V
Sbjct: 85 IVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVAN 144
Query: 143 -----------HDGLSDMEQQS-----NNEETSVYRSSPLMMKCRSSLELFFAIWFVMGN 186
H+ LS E +S NN + + +S S+ +F +W+++G
Sbjct: 145 SPPPSGEDSSNHESLSGSEDESDGYSINNTDDDDHGTS-FTKHLESANTMFSFVWWIIGF 203
Query: 187 VWAFDSRFGSFQQAPKLQILCIILLAWNAICYXXXXXXXXXXXXXXXXXXXXXGYNMNMG 246
W Q +P+L LC+ LA++ + +
Sbjct: 204 YWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAILYAL 263
Query: 247 SSARGASEDQISQLASWKF-------------KAAHANLDLSNDDPQSSER-LINEDPEC 292
+ GA +++I +L +KF + + D +ER L++ED EC
Sbjct: 264 ADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSEDAEC 323
Query: 293 CICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
ICL Y+D E+R+LPC H FH CVD+WL+I + CPLCK
Sbjct: 324 SICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 364
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 22/271 (8%)
Query: 84 MMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQL---- 139
+ L+++ + + L +S+ EKP P+R+W+ GY I C L++ +C Y +
Sbjct: 110 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRR 169
Query: 140 HVTHDGLSDMEQQSNNEETSVYR------SSPLMMKCRSSLELFFAIWFVMGNVWAFDSR 193
H G S + S+ + S+ + +S S+ +F IW+++G W
Sbjct: 170 HPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGG 229
Query: 194 FGSFQQAPKLQILCIILLAWNAICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGAS 253
+P+L LCII L ++ + + GAS
Sbjct: 230 QTLSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGAS 289
Query: 254 EDQISQLASWKF-----------KAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDK 302
++ I Q+ ++F KA + D P L ED ECCICL +Y+D
Sbjct: 290 KNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSP-IERSLSPEDAECCICLCEYEDG 348
Query: 303 EEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
E+R+LPC+H FH C+D+WL I S CPLCK
Sbjct: 349 VELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 127/299 (42%), Gaps = 54/299 (18%)
Query: 84 MMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVT- 142
++L+++ + ++ T L +S+ E PI P+R+W+ GY + CVL+++ +C Y + +
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160
Query: 143 ---------------------------------HDGLSDMEQQSNNEETSVYRSSPLMMK 169
+ G+ D+ + E SS +
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTE-----SSSVAKH 215
Query: 170 CRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWNAICYXXXXXXXXXXX 229
S+ +F IW+++G W Q++P++ L I+ L ++
Sbjct: 216 LESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIG 275
Query: 230 XXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSER----- 284
+ + GAS++ I QL +KF+ +ND+ Q +
Sbjct: 276 IAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTE 335
Query: 285 ----------LINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
L+ ED ECCICL+ Y+D E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 336 CGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 394
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 54/304 (17%)
Query: 84 MMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVT- 142
++L+++ + ++ T L +S+ E PI P+R+W+ GY + CVL+++ +C Y + +
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 89
Query: 143 ---------------------------------HDGLSDMEQQSNNEETSVYRSSPLMMK 169
+ G+ D+ + E SS +
Sbjct: 90 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTE-----SSSVAKH 144
Query: 170 CRSSLELFFAIWFVMGNVWAFDSRFGSFQQAPKLQILCIILLAWNAICYXXXXXXXXXXX 229
S+ +F IW+++G W Q++P++ L I+ L ++
Sbjct: 145 LESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIG 204
Query: 230 XXXXXXXXXXGYNMNMGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSER----- 284
+ + GAS++ I QL +KF+ +ND+ Q +
Sbjct: 205 IAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTE 264
Query: 285 ----------LINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQ 334
L+ ED ECCICL+ Y+D E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 265 CGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKY 324
Query: 335 GLQR 338
+ +
Sbjct: 325 NILK 328
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 95 ITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVT----------HD 144
+ ++ L + E+P P+R+WI Y + C+ +++L+ Y + + T H+
Sbjct: 89 VLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHE 148
Query: 145 GLS---DMEQQSNNEETSVYRSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQAP 201
+ D EQ S++ T+ + +C S + IW+++G W + +AP
Sbjct: 149 DYNIEYDYEQDSDDNSTTY----SFVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAP 204
Query: 202 KLQILCIILLAWNAICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQLA 261
L L +I LA + + + G SE ++ L
Sbjct: 205 NLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALLYAVAGTEGVSEAELGVLP 264
Query: 262 SWKFKAAHAN------------LDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLP 309
+KFKA H+N + ++ + L+ ED +CCICL+ Y+D E+ LP
Sbjct: 265 LYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALP 324
Query: 310 CSHLFHQKCVDQWLKIISCCPLCKQGLQR 338
C+H FH C+ +WLK+ + CPLCK + +
Sbjct: 325 CNHHFHSTCIVKWLKMRATCPLCKYNILK 353
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 36/325 (11%)
Query: 35 NRPSSPSIMTRVAM---RASRSRWFTFLRRVFHYQN--GPRSDLGSNPFNSSTWMMLELI 89
+R SSP +A+ RAS R + + R Q R+D G + + M+
Sbjct: 19 SRQSSPRRQPVIAVLLNRASGRRGASMVVRETAAQELEERRADWGYSKPVVALDMLWNTA 78
Query: 90 ALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQ---------LH 140
++V I L + K EKP P+RIWI GY I C+++++L+ + + L
Sbjct: 79 FVLVAIV----MLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLE 134
Query: 141 VTHDGLSDMEQQSNNEETSVYRSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQA 200
D E + N+E ++ C S + +W+++G W Q A
Sbjct: 135 AAQATNQDSEDEDNDERFLSTKT------CESMNTIISFVWWIVGFYWLVSGGDILLQNA 188
Query: 201 PKLQILCIILLAWNAICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQL 260
L L + LA++ + + GASE +S L
Sbjct: 189 THLYWLTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALLYAVAGQEGASEADLSIL 248
Query: 261 ASWKFKAAHAN------------LDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQL 308
++F + + +D ++++ + L+ ED +CCICL+ Y+D E+ L
Sbjct: 249 PKYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSL 308
Query: 309 PCSHLFHQKCVDQWLKIISCCPLCK 333
PC+H FH C+ +WLK+ + CPLCK
Sbjct: 309 PCNHHFHSTCIVKWLKMNATCPLCK 333
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 105 SKSEKPIWPMRIWIAGYDIGCVLNLLLLCGRYHQLHVTH-------------------DG 145
S E P P+R+WI GY + C+++++ +C Y + + D
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDE 155
Query: 146 LSDMEQQSNNEETSVY------RSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFGSFQQ 199
+ N++E + ++ S+ + IW+V+G W Q
Sbjct: 156 EEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQG 215
Query: 200 APKLQILCIILLAWNAICYXXXXXXXXXXXXXXXXXXXXXGYNMNMGSSARGASEDQISQ 259
+P+L LCI+ L ++ + + GAS++ I Q
Sbjct: 216 SPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQ 275
Query: 260 LASWKFKAAHANLDLSNDDPQS-----------------SERLINEDPECCICLAKYKDK 302
L +KF+ + + D+ Q L +ED ECCICL+ Y+D+
Sbjct: 276 LTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDE 335
Query: 303 EEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 336 TELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 21/100 (21%)
Query: 246 GSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDP------------ECC 293
G RG S+D + H L L+ ++ E LI E P EC
Sbjct: 186 GQEMRGISQDAATY---------HPGLYLTPAQTEAVEALIQELPKFRLKAVPDDCGECL 236
Query: 294 ICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
ICL ++ EVR LPC+H FH +C+DQWL++ CP C+
Sbjct: 237 ICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCR 276
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 245 MGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEE 304
+G+ +RG S D I+ L S ++K N + +N+ C IC Y+D E+
Sbjct: 255 VGTESRGLSADTIASLPSKRYKEGD-NQNGTNE-------------SCVICRLDYEDDED 300
Query: 305 VRQLPCSHLFHQKCVDQWLKIISCCPLC 332
+ LPC H +H +C++ WLKI CP+C
Sbjct: 301 LILLPCKHSYHSECINNWLKINKVCPVC 328
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 287 NEDP-ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKII-SCCPLCKQGLQR 338
+EDP +C ICL +Y++ + +R LPC H FH+ CVD+WLK I CPLC+ + R
Sbjct: 484 SEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDICR 537
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 287 NEDP-ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKII--SCCPLCKQGLQR 338
+EDP +C ICL +Y++ + +R LPC H FH+ CVD+WLK I CPLC+ + R
Sbjct: 484 SEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDICR 538
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
C ICL YK K +RQLP C+HLFH KC+D WL++ CP+C+
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCR 189
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Query: 245 MGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEE 304
+ ++ G +E I + +K+K+ +D S +C +CL+++++ E
Sbjct: 110 ISTNGDGLNESMIKSITVYKYKSGDGFVDGS---------------DCSVCLSEFEENES 154
Query: 305 VRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
+R LP C+H FH C+D WLK S CPLC+
Sbjct: 155 LRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 251 GASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECC-ICLAKYKDKEEVRQLP 309
G +E+ I ++ A + L + +S CC ICLA YK + +R LP
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTS---------CCSICLADYKKMDMIRVLP 146
Query: 310 -CSHLFHQKCVDQWLKIISCCPLCK 333
C+HLFH CVD WL++ CP+C+
Sbjct: 147 DCNHLFHDNCVDPWLRLHPTCPVCR 171
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 287 NEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQG 335
N+D C ICL++Y KE VR +P C H FH +C+D WLKI CPLC+
Sbjct: 315 NDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNS 364
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 284 RLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
++ ++D EC ICL + +D E VR LP C+HLFH C+D WL + CP+C+ L
Sbjct: 116 KIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 284 RLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
++ N EC ICL +++D+E +R +P CSH FH C+D+WL S CP+C+ L
Sbjct: 112 KIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL 165
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 284 RLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
R+ E EC +CL +++D E +R +P C H+FH C+D WL+ + CPLC+ L
Sbjct: 136 RIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADL 189
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 249 ARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQL 308
+RG E I + +KFK + D + E EC +CL++++D+E++R +
Sbjct: 96 SRGLDESVIRAIPIFKFKKRYDQND-GVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154
Query: 309 P-CSHLFHQKCVDQWLKIISCCPLCK 333
P CSHLFH C+D WL+ + CPLC+
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCR 180
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 282 SERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+++L + EC ICL +++D E +R LP C H+FH C+D WL+ CP+C+ L
Sbjct: 118 TQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 283 ERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
E I +D +C +CL Y+ +E+++Q+P C H FH +C+D WL + CPLC+ L
Sbjct: 102 ESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 156
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
EC +CL+K++D E +R LP C H FH C+DQWL+ + CPLC+
Sbjct: 123 ECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 166
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL ++D E+VR LP C+H FH +C+D WL S CP C+Q L
Sbjct: 113 ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 245 MGSSARGASEDQISQLASWKFKAAHAN---LDLSNDDPQSSERLINEDPECCICLAKYKD 301
+G +G S+++IS+L + K+ + L + ++ + +D +C ICL +Y
Sbjct: 191 VGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMK-------KKFVADDSQCSICLMEYAK 243
Query: 302 KEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+++ LPC H++H+ C+ QWLK C +CK
Sbjct: 244 GDKITTLPCKHIYHKDCISQWLKQNKVCCICK 275
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 245 MGSSARGASEDQIS-QLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKE 303
+G G +E+ IS +L K+K+ + PQ +E CC+C +Y + E
Sbjct: 603 IGDVCTGVNEETISNRLKQRKYKS-------NTKSPQDAE-------PCCVCQEEYTEGE 648
Query: 304 EVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
++ L C H FH +C+ +WLK + CP+CK
Sbjct: 649 DMGTLECGHEFHSQCIKEWLKQKNLCPICK 678
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 288 EDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQR 338
+D C ICL++Y+ KE +R +P C H FH C+D+WLK+ CP+C+ ++
Sbjct: 326 DDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNSPEQ 377
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 33/43 (76%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+C +C+ +++D +V+Q+PC H+FHQ C+ WL++ + CP+C+
Sbjct: 215 QCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 284 RLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
R+ E EC +CL +++D E +R +P C H+FH C+D WL+ + CPLC+ L
Sbjct: 110 RIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANL 163
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 287 NEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
++D +C IC +Y D +E+ +PC H++H CV QWL++ + CP+CK
Sbjct: 470 DDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 287 NEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
++D +C IC +Y D +E+ +PC H++H CV QWL++ + CP+CK
Sbjct: 470 DDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 287 NEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
++D +C IC +Y D +EV LPC H +H C QWL++ + CP+CK
Sbjct: 463 DDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 287 NEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
++D +C IC +Y D +EV LPC H +H C QWL++ + CP+CK
Sbjct: 463 DDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
EC ICL ++K +E V+++PC H FH C+++WL CP+C+
Sbjct: 112 ECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCR 154
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL +++D+E +R +P CSH FH C+D WL S CP+C+ L
Sbjct: 127 ECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
C ICL++Y KE VR +P C H FH +C+D+WLKI S CP+C+
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
EC +CL+ K++++ R+LP C H+FH CVD WL S CP+C+ ++
Sbjct: 107 ECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVE 154
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL++++D+E +R +P CSH FH C+D WL S CP+C+ L
Sbjct: 122 ECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANL 168
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC +CL +++D E +R +P C H+FH CVD WL S CPLC+ L
Sbjct: 134 ECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL 180
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 288 EDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
ED +C IC +Y +EV +L C H +H KCV +WL+I S CP+CK
Sbjct: 444 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICK 489
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 254 EDQISQLASWKFKAAHANLDLSNDDPQSSERL-------INEDPECCICLAKYKDKEEVR 306
++QIS A+ A L L+N+ P + + + E EC IC ++ +
Sbjct: 437 DEQISLRATVSSTRTTARL-LTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMET 495
Query: 307 QLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
+LPC H +H +CV++WLKI + CP C+ L
Sbjct: 496 ELPCKHKYHLECVEKWLKIHTSCPQCRYKL 525
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL+++ DKE +R +P CSH FH C+D WL S CP C+ L
Sbjct: 122 ECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANL 168
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQG 335
C ICL++Y KE VR +P C H FH KC+D WLKI CPLC+
Sbjct: 316 CPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
D C ICL++Y KE VR LP C H FH +C+D WLK+ S CP+C+
Sbjct: 324 DVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCR 369
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 250 RGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLP 309
+G + + L F AA + + ++ S+E C ICL + D EE+R LP
Sbjct: 68 KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTE--------CAICLTDFADGEEIRVLP 119
Query: 310 -CSHLFHQKCVDQWLKIISCCPLCKQGL 336
C H FH +C+D+WL S CP C++ L
Sbjct: 120 LCGHSFHVECIDKWLVSRSSCPSCRRIL 147
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 284 RLINEDPE---CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
R+ + PE C +CL ++ E VR LP C H+FH C+D+WL+ + CPLC++ L
Sbjct: 165 RITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 284 RLINEDPE---CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
R+ + PE C +CL ++ E VR LP C H+FH C+D+WL+ + CPLC++ L
Sbjct: 189 RITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
EC +CLA+++ E +R LP C H FH +CVD WL S CPLC+
Sbjct: 91 ECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 134
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 288 EDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
E +C +CL+++++ E +R LP C+H FH C+D WLK S CPLC+
Sbjct: 155 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIIS-CCPLCKQGL 336
+C +CL+K K+ EEVR+L C H+FH+KC++ WL + CPLC+ L
Sbjct: 85 DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSAL 131
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 287 NEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISC-CPLCKQGL 336
N +C +CL+K K EEVR+L C H+FH++C++ WL+ ++ CPLC+ L
Sbjct: 69 NAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPL 119
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 252 ASEDQISQLASWKFKAAHANLDLSNDDPQSSERLI----------NEDPECCICLAKYKD 301
A+ D + L S AA L L +S R++ N P C ICL Y+
Sbjct: 48 ATSDVVLDLPS---PAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEA 103
Query: 302 KEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQ 334
+E VR +P C+H FH CVD+WL+ + CPLC+
Sbjct: 104 REPVRCIPECNHCFHTDCVDEWLRTSATCPLCRN 137
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 288 EDP-ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
E P +C +CL ++ D +++R LP CSH FH C+D WL S CPLC++ L
Sbjct: 202 EQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+C +CL ++ +K+++R LP CSH FH C+D WL+ S CPLC+ L
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTL 188
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL ++ D E VR LP C+H FH C+D WL S CP C+ L
Sbjct: 104 ECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 252 ASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLPCS 311
ASE I+ L S K H D+S +C +C+ ++ + +LPC
Sbjct: 199 ASEPTINSLPSVKITPQHLTNDMS---------------QCTVCMEEFIVGGDATELPCK 243
Query: 312 HLFHQKCVDQWLKIISCCPLCKQGL 336
H++H+ C+ WL++ + CP+C++ L
Sbjct: 244 HIYHKDCIVPWLRLNNSCPICRRDL 268
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
EC +CL+++++ +E R LP C H+FH C+D W + S CPLC+ +Q
Sbjct: 112 ECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQ 159
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 14/90 (15%)
Query: 245 MGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEE 304
+ SS G + I ++ +K K ++ D C ICL ++ + E
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTD-------------CSICLGEFNEDES 167
Query: 305 VRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
+R LP C+H FH C+D+WLK S CPLC+
Sbjct: 168 LRLLPKCNHTFHVVCIDRWLKSHSNCPLCR 197
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 248 SARGASEDQISQLASWKFK------------------AAHANLDLSNDDPQSSERLINED 289
S SE++I+ L K+K +A LD +N+ + +E ++
Sbjct: 153 STTSMSEEEINALPVHKYKVLDPENGCSLAKQASTSSSAEKMLDSANESKKGTE----DE 208
Query: 290 PECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
C +CL + E VR LPC H FH C+D WL+ CP+CK
Sbjct: 209 LTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCK 252
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 288 EDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+D C +CL ++ KE V PC H+FH++C+ WLK CP+C+
Sbjct: 168 DDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 213
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 276 NDDPQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQG 335
N+ P+S+ + N C ICL K + +R LPC H FH+ C+D WL CP+CK
Sbjct: 573 NNLPESTVQTDNFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSS 632
Query: 336 L 336
+
Sbjct: 633 V 633
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 245 MGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEE 304
+G+ +RG S++ I L + K+K S + E C IC KYK E
Sbjct: 162 VGTESRGLSQELIETLPTKKYKFGSI----------FSRKRAGE--RCVICQLKYKIGER 209
Query: 305 VRQLPCSHLFHQKCVDQWLKIISCCPLC 332
LPC H++H +C+ +WL I CP+C
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVC 237
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 245 MGSSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEE 304
+G+ +RG S++ I L + K+K S + E C IC KYK E
Sbjct: 162 VGTESRGLSQELIETLPTKKYKFGSI----------FSRKRAGE--RCVICQLKYKIGER 209
Query: 305 VRQLPCSHLFHQKCVDQWLKIISCCPLC 332
LPC H++H +C+ +WL I CP+C
Sbjct: 210 QMNLPCKHVYHSECISKWLSINKVCPVC 237
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 250 RGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLP 309
RG E I + +KFK ++ ++ QS EC +CL ++++ E++R +P
Sbjct: 100 RGLDESAIRAIPVFKFKKRDV---VAGEEDQSKN-----SQECSVCLNEFQEDEKLRIIP 151
Query: 310 -CSHLFHQKCVDQWLKIISCCPLCKQGL 336
C H+FH C+D WL+ + CPLC+ +
Sbjct: 152 NCCHVFHIDCIDIWLQGNANCPLCRTSV 179
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 279 PQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
P S E N +P CCIC +Y + + + L C H FH+ C+ QW+ I + CP+CK
Sbjct: 644 PSSVELHQNIEP-CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 279 PQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
P S E N +P CCIC +Y + + + L C H FH+ C+ QW+ I + CP+CK
Sbjct: 644 PSSVELHQNIEP-CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 279 PQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
P S E N +P CCIC +Y + + + L C H FH+ C+ QW+ I + CP+CK
Sbjct: 644 PSSVELHQNIEP-CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWL-KIISCCPLCKQ 334
CCICL Y+ +++R LPC H FH CVD WL + S CP+CK+
Sbjct: 234 CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKR 277
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 286 INEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
I + C +C ++ + E R++PC HLFH C+ WL I + CP+C+
Sbjct: 193 IGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCR 240
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
C ICL++Y KE VR +P C H FH +C+D WLKI CPLC+
Sbjct: 138 CPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCR 180
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 283 ERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
E D +C +CL Y+ +E+++Q+P C H FH +C+D WL + CPLC+ L
Sbjct: 88 ESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSL 142
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
EC +CL+++KD E R +P C H FH C+D W S CPLC+ ++
Sbjct: 75 ECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCRSLIE 122
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL + + E VR LP C+H FH KC+D WL S CP C+Q L
Sbjct: 112 ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 284 RLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQ 334
R +E C IC K KD EEV +L C H FH C+ WL + + CPLC +
Sbjct: 219 RSDDETKRCVICQQKLKDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNR 269
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 276 NDDPQSSERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQ 334
+D P SS + EC IC+ ++ + EE+R LP CSH FH C+D+WL S CP C++
Sbjct: 97 DDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRR 156
Query: 335 GL 336
L
Sbjct: 157 IL 158
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 288 EDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+D C +CL ++ KE V PC H+FH++C+ WLK CP+C+
Sbjct: 140 DDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 185
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 287 NEDP-ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
++DP EC +CL+++++ E R LP C H FH C+D W S CPLC+
Sbjct: 113 HKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCR 161
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 259 QLASWKFKAAHANLDLSNDDPQSSERLINE--------DPECCICLAKYKDKEEVRQLPC 310
QL + H N L+ +S R + D +C IC +Y+ K+EV +L C
Sbjct: 278 QLLELGERIGHVNTGLTEKQIKSCLRKVKPCRQDTTVADRKCIICQDEYEAKDEVGELRC 337
Query: 311 SHLFHQKCVDQWLKIISCCPLCK 333
H FH CV+QWL + CP+CK
Sbjct: 338 GHRFHIDCVNQWLVRKNSCPVCK 360
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
EC +CL+ ++K+ R LP C H+FH CVD WL S CP+C+
Sbjct: 99 ECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
CC+C +Y + +++ L C H FH CV QWL + + CP+CK
Sbjct: 619 CCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL +++D E +R LP C H+FH C+ WL+ CP+C+ L
Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
EC +CL ++KD E +R +P C H+FH CVD WL S CP+C+
Sbjct: 84 ECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICR 127
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
+C +CL+K++ E +R LP C H FH C+DQWL+ + CPLC+
Sbjct: 122 DCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQG 335
+C +CL ++ ++E+R LP CSH FH +C+D WL S CPLC+
Sbjct: 121 DCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDN 166
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 279 PQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQG 335
P S L+ D +C IC +Y+ ++EV +L C H FH CV QWL + CP+CK+
Sbjct: 309 PSVSHTLV--DRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKKA 363
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQ 334
D C ICL +YK+ E +R +P C H FH C+D WLK+ CP+C+
Sbjct: 135 DTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+C +CL ++++ + VR LP C H FH +C+D+WL+ CPLC+ +
Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+C +CL ++++ + VR LP C H FH +C+D+WL+ CPLC+ +
Sbjct: 155 DCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 286 INEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
I+E +C ICL + E +++PC H FH +C+ WL++ S CP+C+ L
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 286 INEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
I+E +C ICL + E +++PC H FH +C+ WL++ S CP+C+ L
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYEL 285
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 247 SSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVR 306
SS RG+S I + A F + +++ L D EC ICL+ + E++R
Sbjct: 99 SSTRGSSNKGIKKKALRMFPVVSYSPEMN---------LPGLDEECVICLSDFVSGEQLR 149
Query: 307 QLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
LP C+H FH +C+D+WL+ CP C+ L
Sbjct: 150 LLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL 180
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 281 SSERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
SSE + + C ICL K E R LP C H FH CVD+WL CP+C+Q ++
Sbjct: 165 SSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAVK 222
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 258 SQLASWKFKAAHANLDLSNDDPQSSERLI--NEDPE------CCICLAKYKDKEEVRQLP 309
SQ S + A AN L QS +L E PE C ICLA++ +E+R LP
Sbjct: 69 SQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLP 128
Query: 310 -CSHLFHQKCVDQWLKIISCCPLCKQGL 336
C H FH C+D WL S CP C+Q L
Sbjct: 129 QCGHGFHVACIDTWLGSHSSCPSCRQIL 156
>AT1G15590.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT1G80400.1). | chr1:5367374-5368232 FORWARD
LENGTH=179
Length = 179
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 81 STWMMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCV---LNLLLLCGR-Y 136
S W ++EL+ +VQI ++ L ++K E + W+ GY GC+ L +LL C R Y
Sbjct: 60 SLWNIMELVVTLVQIVASLIVLTLAKDEHQQALLLTWVIGYTCGCITITLLILLSCVRKY 119
Query: 137 HQLHVTHDGLSDMEQQSNNEETSVYRSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFG- 195
+++ V S R+ +M + E FF +W VMG +W +G
Sbjct: 120 NRIGV----------------YSKTRTDRVMDALKMGNECFFVVWLVMGILWIC---YGH 160
Query: 196 -SFQQAPKLQILC 207
S PKL C
Sbjct: 161 SSSSDTPKLYRFC 173
>AT1G15590.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: RING/U-box superfamily protein (TAIR:AT1G80400.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr1:5367374-5368232
FORWARD LENGTH=179
Length = 179
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 81 STWMMLELIALMVQITSTTFTLAISKSEKPIWPMRIWIAGYDIGCV---LNLLLLCGR-Y 136
S W ++EL+ +VQI ++ L ++K E + W+ GY GC+ L +LL C R Y
Sbjct: 60 SLWNIMELVVTLVQIVASLIVLTLAKDEHQQALLLTWVIGYTCGCITITLLILLSCVRKY 119
Query: 137 HQLHVTHDGLSDMEQQSNNEETSVYRSSPLMMKCRSSLELFFAIWFVMGNVWAFDSRFG- 195
+++ V S R+ +M + E FF +W VMG +W +G
Sbjct: 120 NRIGV----------------YSKTRTDRVMDALKMGNECFFVVWLVMGILWIC---YGH 160
Query: 196 -SFQQAPKLQILC 207
S PKL C
Sbjct: 161 SSSSDTPKLYRFC 173
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 288 EDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
E +C +CL ++++ E +R LP C+H FH C+D WL + CPLC+ G+
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI 222
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWL-KIISCCPLCKQGLQ 337
C ICL Y+ E +R LPC H FH C+D WL K + CP+CK ++
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIR 278
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 285 LINEDPE-----CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+I ED E C ICL ++ + ++PC H FH KCV++WL + CP+C+
Sbjct: 97 VIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCR 150
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+C +CL +++ ++++R LP CSH FH +C+D WL S CPLC+ L
Sbjct: 125 DCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNL 171
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
C +CL+++++++E R LP C H FH C+D W + S CPLC+ +Q
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQ 154
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
+C +CL +++ ++++R LP CSH FH C+D WL S CPLC+
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 281 SSERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
SS N EC ICL+++ D++ VR + C H FH C+D W ++ CP+C+
Sbjct: 92 SSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCR 145
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 247 SSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVR 306
++G + D + ++ K + NLD S N+D C +CL ++ E VR
Sbjct: 158 GGSKGLTGDLVDKIPKIKITGKN-NLDASG----------NKD-SCSVCLQDFQLGETVR 205
Query: 307 QLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
LP C H+FH C+D WL CP+C++ L
Sbjct: 206 SLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
D +C +CL Y+ ++++Q+P C H FH C+D WL + CPLC+ L
Sbjct: 97 DSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLCRLAL 145
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWL-KIISCCPLCKQGLQ 337
C ICL Y+ E +R LPC H FH C+D WL K + CP+CK ++
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIR 278
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 287 NEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
NED C ICL+ +++ E V+ +P C H+FH CVD WL CPLC+
Sbjct: 137 NED--CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCR 182
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+C +CL ++ E +++PC H FH +C+ WL++ S CP+C+
Sbjct: 258 QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCR 300
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQG 335
D C ICL++Y +E V+ LP C H FH +C+D WLK+ + CP+C+
Sbjct: 261 DTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNS 308
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
EC +CL+ D ++ R LP C+H FH C+D W + S CPLC+
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC +C+ +++D E +R +P C H+FH CV WL S CPLC+ L
Sbjct: 95 ECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDL 141
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 283 ERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
E L D CC+CL +++ KEE+ ++P C H+FH C+ WL + CPLC+ +
Sbjct: 96 EELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSV 150
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
D EC ICL+++ +E V+ LP C H FH +C+D+WL S CP C+ L
Sbjct: 128 DTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCL 176
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
C +C + +E+VR+LPCSH +H +C+ WL I + CP+C+ L
Sbjct: 335 CAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYEL 379
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 286 INEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
I + EC +CL ++++ E +R LP CSH FH C+D WL CPLC+
Sbjct: 129 IIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+C +CL ++ + +++R LP CSH FH C+D WL S CPLC+ L
Sbjct: 143 DCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTL 189
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+C +CL+K++ ++++R LP C H FH C+D WL CPLC+ L
Sbjct: 116 DCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPL 162
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 279 PQSSERLINEDP---ECCICLAKYKDKEEVRQL--PCSHLFHQKCVDQWLKIISCCPLCK 333
P SS + + ED EC ICL +++++ + +L C H+FHQ+C+DQWL+ CP+C+
Sbjct: 98 PFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCR 157
Query: 334 QGL 336
+ L
Sbjct: 158 RNL 160
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQR 338
+C +C+ ++ + R+LP C H+FH+KCVD WL +S CP+C+ + R
Sbjct: 114 DCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICRDRVYR 162
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQ 334
C ICL +Y ++E +R +P C H FH C+D WLK+ CP+C+
Sbjct: 136 CSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRN 179
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 271 NLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCC 329
L S D P +E+L+ EC ICL ++ +E+R LP C H FH C+D WL S C
Sbjct: 88 KLTYSPDSP-PAEKLV----ECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSC 142
Query: 330 PLCKQGL 336
P C+Q L
Sbjct: 143 PSCRQIL 149
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
C IC + KE+V++LPC H +H +C+ WL I + CP+C+ L
Sbjct: 291 CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNTCPVCRHEL 335
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 281 SSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
+ + L + D C +C +++ K E +Q+PC H++H C+ WL + CP+C++ L
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 281 SSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
+ + L + D C +C +++ K E +Q+PC H++H C+ WL + CP+C++ L
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 281 SSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
+ + L + D C +C +++ K E +Q+PC H++H C+ WL + CP+C++ L
Sbjct: 175 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 282 SERLINEDPECCICLAKYKDKEE--VRQLPCSHLFHQKCVDQWLKIISCCPLCKQ 334
S L ED C IC+ K+ + E +R C HLFHQ C+ +WL + + CPLC++
Sbjct: 149 SADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLCRK 203
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 286 INEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
+ E +C +CL++++++E +R LP C H FH C+D WL+ + CPLC+
Sbjct: 211 VVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCR 259
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
C IC +K++E++ L C H +H +C+++WL + + CP+CK
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
C IC +K++E++ L C H +H +C+++WL + + CP+CK
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 280 QSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+SS R E CC+C +YK++EE+ +L C H FH +C+ +WLK + CP+CK
Sbjct: 580 KSSTRSSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICK 633
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 275 SNDDPQSSERLINEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
N++ +SE N D C +CL ++ E VR LP C H+FH C+D WL CP+C+
Sbjct: 183 GNNNTDASE---NTD-SCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
Query: 334 Q 334
+
Sbjct: 239 R 239
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 294 ICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
ICL +++ E+++ LP CSH +H +CVD+WLK S CPLC+ ++
Sbjct: 109 ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIR 153
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 285 LINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
L + D C +C +++ E +Q+PC+H++H C+ WL + CP+C+Q L
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 285 LINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
L + D C +C +++ E +Q+PC+H++H C+ WL + CP+C+Q L
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 285 LINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
L + D C +C +++ E +Q+PC+H++H C+ WL + CP+C+Q L
Sbjct: 183 LRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWL-KIISCCPLCKQ 334
C IC+ Y+ E +R LPC H +H C+D WL + S CP+CKQ
Sbjct: 116 CAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQ 159
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQ 334
EC +CL++ D ++ R LP C H FH +C+D WL+ S CP+C++
Sbjct: 87 ECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRK 131
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 288 EDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
E C IC YK+++++ L C H +H +C+ +WL I + CP+CK
Sbjct: 424 ETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICK 469
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 288 EDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
E C IC YK+++++ L C H +H +C+ +WL I + CP+CK
Sbjct: 424 ETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICK 469
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIIS---CCPLCKQ 334
C ICL Y +++R LPCSH FH CVD WL IS CP+CK+
Sbjct: 231 SCAICLEDYIVGDKLRVLPCSHKFHVACVDSWL--ISWRTFCPVCKR 275
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKI-ISCCPLCKQ 334
C ICL Y +++R LPC H FH CVD WL + CP+CK+
Sbjct: 232 CAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKR 275
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
Query: 248 SARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQ 307
S+ G S + +L +KF +P + R + +C +C ++ + R
Sbjct: 80 SSDGLSSRFVKKLPQFKF-----------SEPSTYTRY---ESDCVVCFDGFRQGQWCRN 125
Query: 308 LP-CSHLFHQKCVDQWLKIISCCPLCK 333
LP C H+FH+KCVD WL S CP+C+
Sbjct: 126 LPGCGHVFHRKCVDTWLLKASTCPICR 152
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 279 PQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGLQR 338
P S E N +P CCIC +Y + + + L C H FH+ C+ QW+ I + CP+ + +R
Sbjct: 644 PSSVELHQNIEP-CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPIFRFNKER 702
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC +CL + D +E+RQL C H FH C++ WLK CP+C+ +
Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDV 187
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 18/76 (23%)
Query: 277 DDPQSSERLINEDPECCICLAKYKDKEEVRQL-PCSHLFHQKCVDQWLKIISC------- 328
D + S +IN+ C +CL +D +EVR+L CSH+FH++C+D+WL C
Sbjct: 69 DAAERSPAMIND--TCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNE 126
Query: 329 --------CPLCKQGL 336
CPLC+ L
Sbjct: 127 GEEDNHRTCPLCRTPL 142
>AT3G51325.1 | Symbols: | RING/U-box superfamily protein |
chr3:19052259-19052531 FORWARD LENGTH=90
Length = 90
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 287 NEDPECC-ICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIIS--CCPLCK 333
+ ECC +CL + + K+ ++ LPCSH FH CVD W + CCPLC+
Sbjct: 20 GREEECCSVCLMRMEAKDVIKSLPCSHEFHSLCVDTWFNVSRKICCPLCR 69
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
C +C ++ E R++PC H+FH C+ WL I + CP+C+
Sbjct: 215 CAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 256
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 249 ARGASEDQISQLASWKFKAAHA--NLDLSNDDPQSSERLINEDPECCICLAKYKDKEE-V 305
RG E +I ++ + +KA A NL + + E+ C IC+ Y + V
Sbjct: 138 GRGVVEIKIWKIKTEFYKANKAAENLLIDSYCYNYLNVATTEENGCAICMEDYIEGSSIV 197
Query: 306 RQLPCSHLFHQKCVDQWLKIISCCPLCKQGLQR 338
+LPC H FH C+++WL++ CPLC+ + +
Sbjct: 198 AKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPK 230
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 283 ERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+R + E +C ICL ++K E + LPC+H FH C+ WL CP C+
Sbjct: 141 KRRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCR 191
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 266 KAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKI 325
K+A L L DP + L + C +C + K R++PC+H++H C+ WL I
Sbjct: 177 KSAIEALPLIEIDP--THLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAI 234
Query: 326 ISCCPLCKQGL 336
+ CP+C+ L
Sbjct: 235 RNSCPVCRHEL 245
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 247 SSARGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVR 306
S G +E QISQL + KFK + ED C IC + Y +++
Sbjct: 161 SVGEGLTEGQISQLPTIKFKPS------------------LEDKMCMICHSDYVRGDKLT 202
Query: 307 QLPCSHLFHQKCVDQWLKIISCCPLCKQ 334
LPC+H +H+ C+ WL+ C +C++
Sbjct: 203 ILPCTHKYHKDCISHWLQNSKLCCVCQR 230
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 286 INEDPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
I E +C +CL ++ E + +PC+H FH C+ WL++ S CP+C+
Sbjct: 217 IEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCR 264
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 246 GSSARGASEDQISQLASWKFKAAHANLDLSNDDPQ---SSERLINEDPECCICLAKYKDK 302
S R AS ++ L+ +K ++N + E + + +C IC ++K
Sbjct: 123 NSEYRPASNLRVGALSRRIYKRKQKTSSIANKSTRYMRKRETYSSGEYKCAICFQEFKTG 182
Query: 303 EEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGLQR 338
EV L C H F KC+ +W K+ CPLC+ L R
Sbjct: 183 REVATLLCGHEFDNKCIMEWFKVRYNCPLCRFELPR 218
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIIS-CCPLCKQGL 336
D EC +CL+K++ E+ +L C HLFH+ C+++W+ + CPLC+ L
Sbjct: 100 DNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPL 148
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 289 DPECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIIS-CCPLCKQGL 336
D EC +CL+K++ E+ +L C HLFH+ C+++W+ + CPLC+ L
Sbjct: 100 DNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPL 148
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 10/55 (18%)
Query: 292 CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISC---------CPLCKQGL 336
C +CL +D++E+R+L C+H+FH+ C+D+WL C CPLC+ L
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPL 137
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL+ + E++R LP C H FH +C+D+WL+ CP C+ L
Sbjct: 135 ECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCL 181
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 9/53 (16%)
Query: 289 DPE--CCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISC----CPLCKQ 334
DPE C +CL+ + +++RQLP C H+FH +C+D+W I+ C CP+C+
Sbjct: 80 DPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRW--IVDCNKITCPICRN 130
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 288 EDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
E EC ICL+ Y EE R P C H++H C+D WLK CP C++ L
Sbjct: 126 ESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDL 175
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWL-KIISCCPLCKQ 334
C IC+ Y E++R LPC H +H C+D WL + S CP+CKQ
Sbjct: 233 CAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQ 276
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCK 333
EC ICL++ ++ R LP C+H FH +C+D W + S CP+C+
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICR 169
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGL 336
C IC + + E QLPC HL+H C+ WL + CPLC+ L
Sbjct: 350 CAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYEL 394
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 291 ECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
EC ICL+ + E++R LP C+H FH +C+D+WL+ CP C+ L
Sbjct: 134 ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCL 180
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 250 RGASEDQISQLASWKFKAAHANLDLSNDDPQSSERLINEDPECCICLAKYKDKEEVRQLP 309
+G S I+ ++ +K N+DP+S+ N++ EC +CL ++ LP
Sbjct: 60 QGLSASVIAAFPTFSYKP-------DNNDPESN----NQEIECPVCLGLIPKNVVIKVLP 108
Query: 310 -CSHLFHQKCVDQWLKIISCCPLCKQ 334
C H+F ++C+ +WL+ + CP+C++
Sbjct: 109 NCMHMFDEECIGKWLESHATCPVCRR 134
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+C +CL ++ E +++PC H FH C+ WL++ S CP+C+
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+C +CL ++ E +++PC H FH C+ WL++ S CP+C+
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 291 ECCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
+C +CL ++ E +++PC H FH C+ WL++ S CP+C+
Sbjct: 224 QCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCR 266
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 287 NEDPECCICLAKYKDKEEVRQLP-CSHLFHQKCVDQWLKIISCCPLCKQGL 336
+ P C ICL + E++R++ CSH FH C+D WL+ S CPLC+ +
Sbjct: 65 HSSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 292 CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCKQGLQ 337
C IC + E + +LPC H +H++C+ WL + CPLC+ ++
Sbjct: 97 CAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNVE 142
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 279 PQSSERLINEDPE---CCICLAKYKDKEEVRQLPCSHLFHQKCVDQWLKIISCCPLCK 333
P S+E ++ D + C +C + +EV +LPC H +H +C+ WL I + CP+C+
Sbjct: 356 PLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCR 413