Miyakogusa Predicted Gene
- Lj6g3v0673390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0673390.1 Non Chatacterized Hit- tr|B8AGT4|B8AGT4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,28.35,1e-18,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
,CUFF.58159.1
(413 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 538 e-153
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 161 8e-40
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 7e-39
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 9e-38
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 154 1e-37
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 1e-37
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 152 4e-37
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 9e-37
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 1e-36
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 2e-36
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 148 6e-36
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 1e-35
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 143 2e-34
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 8e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 2e-32
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 5e-32
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 7e-32
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 135 7e-32
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 8e-32
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 8e-32
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 133 2e-31
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 7e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 1e-30
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 3e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 6e-29
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 3e-28
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 8e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 2e-27
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 8e-26
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 114 1e-25
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 114 2e-25
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 110 2e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 110 2e-24
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 110 2e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 109 4e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 108 5e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 2e-23
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 4e-23
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 105 7e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 7e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 94 2e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 94 2e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 5e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 84 2e-16
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 9e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 9e-16
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 3e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 79 5e-15
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 2e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 9e-14
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 72 7e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 71 2e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 69 8e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 9e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 68 1e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 68 1e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 65 7e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 62 6e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 59 7e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 57 2e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 57 2e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 57 3e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 55 6e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 55 7e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 8e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 55 9e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 55 1e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 2e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 53 4e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 53 4e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 5e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 52 6e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 52 6e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 52 6e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 51 2e-06
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 51 2e-06
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 51 2e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 49 4e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 49 4e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 49 6e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 6e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 6e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 6e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-05
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 538 bits (1385), Expect = e-153, Method: Compositional matrix adjust.
Identities = 245/413 (59%), Positives = 314/413 (76%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
MVTFF+WAV+ P + +D+GSY VI++ALGRRK FSFMM VL+ M GV DL L+I +
Sbjct: 134 MVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAM 193
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
DSFVR +V +AI++F G+ TE+ N LL+CLCERSHV AA SVFN+ KG + F
Sbjct: 194 DSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF 253
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ +YN + GWSK G E+E+V+KEM G PDC ++ +EGLGR GR++++ E+F
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
++K + PD VYNAMI NFIS DFDE M+YY ML +CEPNL+TY+++++ L++
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
RKV DAL++F+EML GVLP TG +T F+K LCSYGPP AA+VIY+K+R++GC IS AY
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAY 433
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
K+LL RLS+ GKCG LLN+W+EMQE GY SDVEVYEYI+ GLC IG LENAVLVMEEA+
Sbjct: 434 KLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMR 493
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYWRSNGWHF 413
KGFCP+R VYS+L +KL+ SN E AYKLFLKIK AR+ ENAR++WRSNGWHF
Sbjct: 494 KGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWHF 546
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 167/351 (47%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVS 70
H D S+ + + R + ++ MR + +IV + + AG
Sbjct: 84 HREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPD 143
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAG 130
KA+++F N++E G +D + N +L LC+ V A +F +++G+ + + TYN +
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILN 203
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
GW R + V+KEM G+ P+ TT+ L+G RAG++ A+E F MK+R+C+
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D Y ++ F + ++EM+ P++ TY +I L ++ V +A+ MF
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
+EM+R G P T I+ L G + ++ GC + + Y +++ S+
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
+ L ++E+M G +++ Y +ISG+ + E+ V+ +A K
Sbjct: 384 SEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAK 434
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
++ M + + P TF + E AG+ D+A ++F +M E C D A +N ++
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
++ + + L + TY I+ ++ AL++ EM+ G+ P
Sbjct: 173 KSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
T +K G A + + ++ C I + Y ++ G+ N+++EM
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 324 QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNA 383
G V Y +I LC +ENAV++ EE + +G+ P+ Y+ LI L +
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 384 ERAYKLFLKIKHARSLENARNY 405
R +L ++++ N + Y
Sbjct: 352 SRGEELMQRMENEGCEPNFQTY 373
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 186/390 (47%), Gaps = 1/390 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ +V L + S + ++ M V G + DL+ V++ + G A+ +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + + D + ++ LC+ HV A ++F M K + +V TY+++ +
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GR+++ R++ +M + P+ TF ++ + G++ EA ++F M +R+ P+ Y
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N++I F + DE + + M+S DC P++ TY +I + +KVVD +++F +M R
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G++ T T T I A +++K+ G ++ Y LL L K GK
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ ++E +Q+ D+ Y + G+C G++E+ + KG P + Y+ +I+
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENARNY 405
E AY LF+K+K L ++ Y
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 176/390 (45%), Gaps = 1/390 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++ L +R + +L M +EAD+++ S V+DS + HV A+ +F
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
++ G+ D + L+ CLC AS + + M + K+ NV T+N++ ++K
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ E E++ EM + P+ T+ + G R+DEA ++F M ++C PD Y
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I F + M+ + +M N TYT +I + +A +F +M+
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
GV P T + LC G A+V+++ ++S + Y I+ + K GK
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+++ + G DV Y +ISG C G E A + + G P Y+ LI
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENARNY 405
L + + +L +++ R +A Y
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 1/310 (0%)
Query: 82 LGMNRDTEALNVLLKCLCERSHVGAASSVFNS-MKGKVAFNVATYNAVAGGWSKFGRFNE 140
LG++ + N+++ CLC RS + A ++ MK ++ T N++ G+ R +E
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 141 IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
++ +M G PD TF + GL + + EA + M + CQPD Y A+I
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+ D + N+M E ++ Y+ +I +L + R V DAL +F EM G+ P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
T + I LC+YG A + ++ + L+ +K GK ++
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
+EM + ++ Y +I+G C +L+ A + + K P + Y+ LIN +
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 381 NNAERAYKLF 390
+LF
Sbjct: 394 KKVVDGMELF 403
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 123/285 (43%), Gaps = 1/285 (0%)
Query: 107 ASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A +F M F ++ ++ + +K +F+ + ++ME GV+ + T+ + +
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
L R ++ A + M + P N+++ F N E + ++M+ +P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ T+T ++ L + K +A+ + + M+ G P T I LC G P AL +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
K + + Y ++ L K LN++ EM G DV Y +IS LCN
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+ +A ++ + L + P+ + ++ LI+ A KLF
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 103/255 (40%), Gaps = 13/255 (5%)
Query: 154 APDCTTFGVFLEGLGRAG-------------RMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
+P G++ GL G ++DEA ++F M + P ++ ++
Sbjct: 14 SPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLS 73
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+ FD + + +M NL TY +I L RR ++ AL + +M++ G P
Sbjct: 74 AIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
T+ + C A+ + + G + L+ L + K + +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
E M G D+ Y +I+GLC G+ + A+ ++ + ++YS +I+ L
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 381 NNAERAYKLFLKIKH 395
+ + A LF ++ +
Sbjct: 254 RHVDDALNLFTEMDN 268
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 6/168 (3%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVS 70
HP +I +Y ++ L + M V ++ + +E D+ +I+ + +AG V
Sbjct: 447 HP----NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVA 129
+F +L+ G+ D A N ++ C++ A ++F MK + TYN +
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ G ++KEM + A D +T+G+ + L GR+D+ F
Sbjct: 563 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKGF 609
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 183/387 (47%), Gaps = 1/387 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++V L +R + +L+ M +E +++ + ++D+ +V+ A+ +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
++ G+ + N L++CLC AS + + M + K+ NV T++A+ + K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ E E++ EM + PD T+ + G R+DEA +F M ++C P+ Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I F DE M+ + EM N TYT +I + R+ +A +F +M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
GVLP T + + LC+ G ALV+++ +RS + Y I++ + K GK
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+++ + G +V Y ++SG C G E A + E +G P Y+ LI
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENA 402
L + + +L +++ R + +A
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDA 606
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 183/390 (46%), Gaps = 1/390 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ ++ L R S + ++ M V G + DL+ IVV+ + G + A+ +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + + N ++ LC +V A ++F M K + NV TYN++ +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GR+++ R++ +M + P+ TF ++ + G++ EA +++ M +R+ PD Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+++I F + DE + M+S DC PN+ TY +I + ++V + +++F EM +
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G++ T T T I A +++K+ G + Y ILL L GK T
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
L ++E +Q D+ Y +I G+C G++E+ + KG P+ + Y+ +++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENARNY 405
E A LF ++K L ++ Y
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 143/336 (42%), Gaps = 3/336 (0%)
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVA 129
I + + LG++ + ++L+ C C RS + A +V M K+ + ++ T N++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLL 158
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
G+ R ++ ++ +M G PD TF + GL R R EA + M + CQ
Sbjct: 159 NGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ 218
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
PD Y ++ D D + +M EP + Y II AL + V DAL +
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
F EM G+ P T I+ LC+YG A + ++ + L+ K
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 310 LGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLV 369
GK +++EM + D+ Y +I+G C +L+ A + E + K P+ +
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 370 YSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
Y+ LI + + +LF ++ + N Y
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 123/285 (43%), Gaps = 1/285 (0%)
Query: 107 ASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A ++F M F ++ ++ + +K +F+ + + ++M+ G++ + T+ + +
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
R ++ A V M + +PD N+++ F N + + +M+ +P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ T+ +I L R + +A+ + D M+ G P T + LC G AL +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
KK + + Y ++ L LN++ EM G +V Y +I LCN
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+ +A ++ + + + P+ + +S LI+ + A KL+
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 35/254 (13%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
++D+A +F M + P ++ ++ +N FD + +M + NL TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC------------------ 273
+I RR ++ AL + +M++ G P T+ + C
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 274 SYGP---PFAALV--IYKKARRS------------GCTISMEAYKILLMRLSKLGKCGTL 316
Y P F L+ +++ R S GC + Y I++ L K G
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
L++ ++M++G V +Y II LCN + +A+ + E +KG P+ + Y+ LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 377 LLDSNNAERAYKLF 390
L + A +L
Sbjct: 301 LCNYGRWSDASRLL 314
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 7/388 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG---VEADLLMLSIVV 60
FF WA K P I Y+ +VK L + + F + G++ +MR +E +L + ++V
Sbjct: 133 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLV 190
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
F A V KAI+V + + G D LL LC+ V A+ +F M+ +
Sbjct: 191 QRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV 250
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
N+ + ++ GW + G+ E + V+ +M G PD + L G AG+M +A+++
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M+ R +P+ Y +I V+ +E MK + EM +CE ++ TYT +++ +
Sbjct: 311 RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ + D+M++ G++P T + L + +K R+ + Y
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
+++ KLG+ + +W EM+E G S V+ + +I+GL + G L A +E +
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVT 490
Query: 361 KG-FCPSRLVYSK-LINKLLDSNNAERA 386
+G F S+ K L+N +L E A
Sbjct: 491 RGLFSVSQYGTLKLLLNTVLKDKKLEMA 518
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 136/320 (42%), Gaps = 6/320 (1%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRF 138
LNE G+ + +L + ++G V+ + + + ++ Y ++ SK +F
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163
Query: 139 NEIERVMKEMEADG---VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
+ +++EM + + P+ F V ++ A + +A EV M + +PD V+
Sbjct: 164 GAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVF 221
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
++ + K + +M NL +T ++ R K+++A + +M
Sbjct: 222 GCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 280
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P T + + G A + + RR G + Y +L+ L K+ +
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ ++ EM+ +DV Y ++SG C G+++ +V+++ + KG PS L Y ++
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV 400
Query: 376 KLLDSNNAERAYKLFLKIKH 395
+ E +L K++
Sbjct: 401 AHEKKESFEECLELMEKMRQ 420
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 7/272 (2%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y V+++AL + M V +M EAD++ + +V F + G + K V ++
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 81 ELG-MNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFN 139
+ G M + +++++ + S + + + ++ YN V K G
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 444
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM- 198
E R+ EME +G++P TF + + GL G + EA + F M R + Y +
Sbjct: 445 EAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF-SVSQYGTLK 503
Query: 199 -IFNFISVNDFDECMKYYNEMLSND--CEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+ N + + E K +++ CE N+ ++T I AL + +A EM+
Sbjct: 504 LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIE 563
Query: 256 HGVLPPTGTITCFIKHLCS-YGPPFAALVIYK 286
+P T +K L Y FA + K
Sbjct: 564 MDFMPQPDTFAKLMKGLKKLYNREFAGEITEK 595
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 177/349 (50%), Gaps = 1/349 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G + D + V++ ++G+ + A+ +F + E + ++++ LC+ A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
S+FN M+ K + +V TY+++ GG G++++ ++++EM + PD TF ++
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G++ EA E++ M R PDT YN++I F N E + ++ M+S CEP+
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ TY+ +I + + ++V D +++F E+ G++P T T + C G AA +++
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ G S+ Y ILL L G+ L I+E+MQ+ + + +Y II G+CN
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
++++A + KG P + Y+ +I L + A LF K+K
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 181/394 (45%), Gaps = 2/394 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ + V++ P+++ +Y ++ L + + + + R M ++A ++ SIV+D
Sbjct: 195 LVLIDRMVEYGFQPDEV-TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
S + G A+ +F + G+ D + L+ LC + + M G+ +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V T++A+ + K G+ E + + EM G+APD T+ ++G + + EA ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + C+PD Y+ +I ++ D+ M+ + E+ S PN TY ++ +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ A ++F EM+ GV P T + LC G AL I++K ++S T+ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
I++ + K +++ + + G DV Y +I GLC G L A ++ +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G P Y+ LI L + + +L ++K
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 189/432 (43%), Gaps = 37/432 (8%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F ++ LP I R + A+ R K + ++G + M +NG+E D+ ++I+++
Sbjct: 55 IDLFESMIQSRPLPTPIDFNR-LCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
+ R + A V G +LG DT + L+ C V A ++ + M + K
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
++ T + + G GR +E ++ M G PD T+G L L ++G A ++F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM------------------LSND 222
M+ERN + Y+ +I + FD+ + +NEM L ND
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 223 CE-----------------PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
+ P++ T++ +I ++ K+++A ++++EM+ G+ P T T
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
I C A ++ GC + Y IL+ K + + ++ E+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G + Y ++ G C G+L A + +E + +G PS + Y L++ L D+ +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 386 AYKLFLKIKHAR 397
A ++F K++ +R
Sbjct: 474 ALEIFEKMQKSR 485
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 88/224 (39%), Gaps = 35/224 (15%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
++++A ++F SM + P +N + +D + + M N E ++ T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
+I R++K++ A + + G P T T + + C G A+ +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV------ 163
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
+ M E D+ +I+GLC G++ A
Sbjct: 164 -----------------------------DRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
+++++ + GF P + Y ++N+L S N+ A LF K++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 14/395 (3%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ ++ L S + ++ M G + DL+ VV+ + G + A+ +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + + N ++ LC+ HV A +F M+ K + NV TYN++ +
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GR+++ R++ M + P+ TF ++ + G++ EA ++ M +R+ PDT Y
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I F N DE + + M+S DC PN+ TY +I + ++V D +++F EM +
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G++ T T T I+ G +A +++K+ + + Y ILL L GK T
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC-----PSRLVY 370
L I++ +Q+ ++ +Y +I G+C G++ A FC P + Y
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA--------WDLFCSLSIKPDVVTY 538
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ +I+ L + A LF K+K +L N+ Y
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 180/387 (46%), Gaps = 6/387 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P D+ +Y +V L +R + +L M ++A++++ + ++D
Sbjct: 208 VALVDQMVQRGCQP-DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
S + HV A+ +F + G+ + N L+ CLC AS + ++M + K+
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV T+NA+ + K G+ E E++ +EM + PD T+ + + G R+DEA ++F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M ++C P+ YN +I F ++ ++ + EM N TYT II +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
A +F +M+ + V T + + LCSYG ALVI+K ++S +++ Y
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
++ + K GK G W+ DV Y +ISGLC+ L+ A + +
Sbjct: 507 NTMIEGMCKAGKVG---EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 361 KGFCPSRLVYSKLIN-KLLDSNNAERA 386
G P+ Y+ LI L D + A A
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASA 590
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 3/330 (0%)
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKF 135
+ LG++ D ++ + C C RS + A +V M K+ + ++ T +++ G+
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLNGYCHS 166
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
R ++ ++ +M G PD TF + GL + EA + M +R CQPD Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
++ D D + N+M + + N+ + II +L + R V A+ +F EM
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G+ P T I LC+YG A + ++ + L+ K GK
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ EEM + D Y +I+G C +L+ A + + + K P+ Y+ LIN
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENARNY 405
E +LF ++ + N Y
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 1/287 (0%)
Query: 104 VGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
V A +F M F ++ +N + +K +F + + ++M+ G++ D T+ +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
F+ R ++ A V M + +PD ++++ + + + ++M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
+P+ T+T +I L K +A+ + D+M++ G P T + LC G AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
+ K + ++ + ++ L K ++++ EM+ G +V Y +I+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
CN G+ +A ++ L K P+ + ++ LI+ A KL
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 33/309 (10%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y ++ L +S +L +M + +++ + ++D+F + G + +A ++
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ + ++ DT N+L+ C + + A +F M K N+ TYN + G+ K
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
R + + +EM G+ + T+ ++G +AG D A VF M D Y
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 196 NAMIFNFISVNDFDECM---KY------------YNEMLSNDCE---------------- 224
+ ++ S D + KY YN M+ C+
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 225 -PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALV 283
P++ TY +I+ L +R + +A +F +M G LP +GT I+ A+
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591
Query: 284 IYKKARRSG 292
+ K+ R SG
Sbjct: 592 LIKEMRSSG 600
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
+++ F + V +++F +++ G+ +T +++ + +A VF M +
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
V ++ TY+ + G +G+ + + K ++ + + + +EG+ +AG++ EA+
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
++FCS+ + +PD YN MI S E + +M + PN TY +I A
Sbjct: 524 DLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
LR + ++ EM G + TI+
Sbjct: 581 LRDCDRAASAELIKEMRSSGFVGDASTIS 609
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 190/405 (46%), Gaps = 2/405 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P+ I ++ ++ L S + ++ M G + +L+ +VV+
Sbjct: 100 VALVDQMVEMGYRPDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
+ G + A + + + D N ++ LC+ HV A ++F M+ K +
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV TY+++ +GR+++ +++ +M + P+ TF ++ + G+ EA ++
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M +R+ PD YN++I F + D+ + + M+S DC P+LDTY +I +
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
++V D ++F EM G++ T T T I+ L G A ++K+ G + Y
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 398
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
ILL L GK L +++ MQ+ D+ +Y +I G+C G++++ +
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG P+ + Y+ +I+ L + AY L K+K L ++ Y
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 179/384 (46%), Gaps = 1/384 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y V+V L +R +L M +EAD+++ + ++DS + HV A+ +F +
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G+ + + L+ CLC AS + + M + K+ N+ T+NA+ + K G+F
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E E++ +M + PD T+ + G R+D+A ++F M ++C PD YN +
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I F ++ + + EM + TYT +I L +A ++F +M+ GV
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T + + LC+ G AL ++ ++S + + Y ++ + K GK +
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
++ + G +V Y +ISGLC+ L+ A ++++ G P Y+ LI L
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 379 DSNNAERAYKLFLKIKHARSLENA 402
+ + +L +++ R + +A
Sbjct: 512 RDGDKAASAELIREMRSCRFVGDA 535
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 3/319 (0%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFG 136
+ LG++ + N+L+ C C RS + A ++ M K+ + ++ T +++ G+
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGK 94
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
R ++ ++ +M G PD TF + GL + EA + M +R CQP+ Y
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ D D N+M + E ++ + II +L + R V DAL +F EM
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G+ P T + I LCSYG A + ++ + L+ K GK
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ ++M + D+ Y +I+G C +L+ A + E + K P Y+ LI
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 377 LLDSNNAERAYKLFLKIKH 395
S E +LF ++ H
Sbjct: 335 FCKSKRVEDGTELFREMSH 353
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 120/276 (43%)
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+K + ++ +N + +K +F+ + + ++M+ G++ + T+ + + R ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
A + M + +P ++++ + + + ++M+ P+ T+T +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I L K +A+ + D M++ G P T + LC G A + K +
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
+ + ++ L K LN+++EM+ G +V Y +IS LC+ G+ +A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
++ + + K P+ + ++ LI+ + A KL
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 173/363 (47%), Gaps = 1/363 (0%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M G + DL VV+ + G + A+ + + + + D ++ LC +
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 104 VGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
V A ++F M K + NV TYN++ +GR+++ R++ +M + P+ TF
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++ + G++ EA +++ M +R+ PD Y+++I F + DE + M+S D
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
C PN+ TY +I + ++V + +++F EM + G++ T T I+ L G A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
I+KK G + Y ILL L K GK L ++E +Q+ D+ Y +I G+
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
C G++E+ + KG P+ ++Y+ +I+ E A LF ++K +L N+
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 403 RNY 405
Y
Sbjct: 571 GTY 573
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 176/372 (47%), Gaps = 2/372 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y +V L +R + +L+ M +EAD+++ + ++D+ +V+ A+ +F
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
++ G+ + N L++CLC AS + + M + K+ NV T++A+ + K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ E E++ EM + PD T+ + G R+DEA +F M ++C P+ Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I F +E M+ + EM N TY +I L + A ++F +M+
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
GV P T + + LC YG ALV+++ ++S + Y I++ + K GK
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+++ + G +V +Y +ISG C G E A + E G P+ Y+ LI
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 376 -KLLDSNNAERA 386
+L D + A A
Sbjct: 579 ARLRDGDKAASA 590
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 150/340 (44%), Gaps = 2/340 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y +++ L +S +L DM + +++ S ++D+FV+ G + +A +++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ + ++ D + L+ C + A +F M K F NV TYN + G+ K
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
R E + +EM G+ + T+ ++GL +AG D A ++F M PD Y
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+ ++ ++ + + + + EP++ TY +I + + KV D +F +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
GV P T I C G A ++++ + G + Y L+ + G
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
+ +EM+ G+ D +I+ L + G+LE + L M
Sbjct: 589 SAELIKEMRSCGFVGDASTISMVINMLHD-GRLEKSYLEM 627
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 143/373 (38%), Gaps = 36/373 (9%)
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNA 127
+ A+ +FG + + N LL + + + S+ M+ ++++++ +YN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ + + + V+ +M G PD T L G R+ EA + M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT------------------ 229
QP+T +N +I N E + + M++ C+P+L T
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 230 -----------------YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
YT II AL + V DAL +F EM G+ P T I+ L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
C+YG A + ++ + L+ K GK +++EM + D+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
Y +I+G C +L+ A + E + K P+ + Y+ LI + E +LF +
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 393 IKHARSLENARNY 405
+ + N Y
Sbjct: 421 MSQRGLVGNTVTY 433
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY---------------YN 216
++D+A ++F M + P +N ++ +N FD + YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 217 EMLSNDC--------------------EPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+++ C EP++ T + ++ +++ +A+ + D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
P T T I L + A+ + + GC + Y ++ L K G
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
L++ ++M++G +DV +Y II LCN + +A+ + E +KG P+ + Y+ LI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 5/398 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P D+ +Y +V L +R + +L+ M +EAD+++ + ++D
Sbjct: 208 VALVDQMVQRGCQP-DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
+ H+ A+ +F ++ G+ D + L+ CLC AS + + M + K+
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV T++A+ + K G+ E E++ EM + PD T+ + G R+DEA +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M ++C P+ Y+ +I F +E M+ + EM N TYT +I +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
R +A +F +M+ GV P T + LC G A+V+++ +RS + Y
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
I++ + K GK ++ + G S +V Y +ISG C G E A ++++
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARS 398
G P+ Y+ LI L + E + +L IK RS
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAEL---IKEMRS 601
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 170/414 (41%), Gaps = 36/414 (8%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ D+ +Y + + RR S + VL M G E D++ LS +++ + + +S A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 73 IQVFGNLNELGMNRDTEALNVLLK----------------------C------------- 97
+ + + E+G DT L+ C
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 98 LCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC+R + A S+ M KGK+ +V YN + G K+ ++ + EM+ G+ PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
T+ + L GR +A + M ER P+ ++A+I F+ E K Y+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
EM+ +P++ TY+ +I ++ +A MF+ M+ P T + IK C
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
+ ++++ + G + Y L+ + C ++++M G ++ Y
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
++ GLC G+L A++V E P Y+ +I + + E ++LF
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 3/335 (0%)
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAG 130
I + + LG++ D ++ + C C RS + A +V M K+ + ++ T +++
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLSSLLN 161
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G+ R ++ ++ +M G PD TF + GL + EA + M +R CQP
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D Y ++ D D + +M E ++ Y II L + + + DAL +F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
EM G+ P T + I LC+YG A + ++ + L+ K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
GK +++EM + D+ Y +I+G C +L+ A + E + K P+ + Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
S LI + E +LF ++ + N Y
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 1/288 (0%)
Query: 104 VGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
V A +F M F ++ +N + +K +F + + ++M+ G++ D T+ +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
F+ R ++ A V M + +PD ++++ + + + ++M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
+P+ T+T +I L K +A+ + D+M++ G P T + LC G AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
+ KK + + Y ++ L K LN++ EM G DV Y +IS L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
CN G+ +A ++ + + + P+ + +S LI+ + A KL+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 182/400 (45%), Gaps = 5/400 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
++ F WA +Y ++++LG+ K F + ++ DM+ + + +++
Sbjct: 112 LSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISR 170
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
+ RA V +AI F + E G ++ N +L L + +VG A VF+ MK K
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
++ +Y + GW + ++ V +EM+ +G PD +G+ + +A + +EA F
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M++RNC+P ++ ++I S ++ ++++ S+ TY ++ A
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+++ DA + DEM GV P T + HL A +Y+ C ++ Y
Sbjct: 351 QRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTY 407
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
+I++ + + IW+EM+ G + ++ +I+ LC+ +L+ A E L
Sbjct: 408 EIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLD 467
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLE 400
G P ++S+L LLD ++ L +K+ R +
Sbjct: 468 VGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQ 507
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 1/359 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G E DL+ + +++ + + AI +F + +G + L++CLC+ H+ A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 108 SSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+FN M + NV TYNA+ G + GR+ + ++++M + P+ TF ++
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G++ EA E++ M + + PD Y ++I DE + + M N C PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
YT +I + ++V D +++F EM + GV+ T T T I+ C G P A ++
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ + Y +LL L GK L I+E M++ ++ Y II G+C +G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
++E+A + KG P+ + Y+ +I+ A LF K+K L N Y
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 144/321 (44%), Gaps = 3/321 (0%)
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVA 129
I +F + LG+ N+++ C+C S AS M K+ F ++ T+ ++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM-KLGFEPDLVTFTSLL 160
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
G+ + R + + ++ G P+ T+ + L + ++ A E+F M +
Sbjct: 161 NGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR 220
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
P+ YNA++ + + + +M+ EPN+ T+T +I A ++ K+++A ++
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
++ M++ V P T I LC YG A ++ R+GC + Y L+ K
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 310 LGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLV 369
+ + I+ EM + G ++ Y +I G C +G+ + A V + + P
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 370 YSKLINKLLDSNNAERAYKLF 390
Y+ L++ L + E+A +F
Sbjct: 401 YNVLLDGLCCNGKVEKALMIF 421
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 2/301 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V FN + + P ++ +Y +V L + +LRDM +E +++ + ++D
Sbjct: 208 VELFNQMGTNGSRP-NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF- 120
+FV+ G + +A +++ + ++ + D L+ LC + A +F M+ +
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
N Y + G+ K R + ++ EM GV + T+ V ++G GR D A EVF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M R PD YN ++ ++ + + M + + N+ TYT II + +
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
KV DA +F + G+ P T T I C G A ++KK + G + Y
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Query: 301 K 301
K
Sbjct: 507 K 507
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 112/304 (36%), Gaps = 35/304 (11%)
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+FN+ + M P F L + + R D +F M+ P N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ + + +M+ EP+L T+T ++ ++ DA+ +FD++L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG----- 311
G P T T I+ LC A+ ++ + +G ++ Y L+ L ++G
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 312 ---------------------------KCGTLL---NIWEEMQEGGYSSDVEVYEYIISG 341
K G L+ ++ M + DV Y +I+G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLEN 401
LC G L+ A + G P+ ++Y+ LI+ S E K+F ++ + N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 402 ARNY 405
Y
Sbjct: 363 TITY 366
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
Y ++ N + F++ + + M+ + P++ +TR+++ + + + + +F++M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
G+ P T + +C P R+ C LGK
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPC----------RASCF---------------LGK-- 143
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
M + G+ D+ + +++G C+ ++E+A+ + ++ L GF P+ + Y+ LI
Sbjct: 144 --------MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 375 NKLLDSNNAERAYKLFLKIKHARSLENARNY 405
L + + A +LF ++ S N Y
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 165/378 (43%), Gaps = 3/378 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMR-VNGVEADLLMLSIVVDS 62
FF WA + P + SY ++V+ LG K F+ + L + R N E + IV +
Sbjct: 88 FFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRA 147
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFN 121
+ RA S+A + F + E G+ + L+ LL LC++ HV A F KG + +
Sbjct: 148 YSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPS 207
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
TY+ + GW++ + +V EM D + L+ L ++G +D +++F
Sbjct: 208 AKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQ 267
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M +PD + I + D K + M D PN+ T+ II L +
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
KV DA + DEM++ G P T T + + C + A + + R+ C Y
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYN 387
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC-NIGQLENAVLVMEEALH 360
++L L ++G+ IWE M E + V Y +I GL G+LE A E +
Sbjct: 388 MVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMID 447
Query: 361 KGFCPSRLVYSKLINKLL 378
+G P L N+L+
Sbjct: 448 EGIPPYSTTVEMLRNRLV 465
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 102/275 (37%), Gaps = 35/275 (12%)
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
+S+ +E R M G+ P L L ++ A E F K P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
Y+ ++ + + D K ++EML +C +L Y ++ AL + V +MF
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
EM G+ P + FI C G + AYK+L
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHS------------------AYKVL------- 301
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+ M+ +V + +II LC ++++A L+++E + KG P Y
Sbjct: 302 ----------DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ ++ D RA KL ++ + L + Y
Sbjct: 352 NSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 386
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 176/381 (46%), Gaps = 5/381 (1%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L D +YR ++ ++ V DMR V DL+ S ++ F R+G++ KA
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGG 131
+ F ++ E G+ D +L++ C + + A ++ N M + A +V TYN + G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
K E +++ EM + PD T + ++G + G + A E+F MKE+ + D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
YN ++ F V D D + + +M+S + P +Y+ ++ AL + + +A +++D
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL---MRLS 308
EM+ + P IK C G +K G +Y L+ +R
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 309 KLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRL 368
+ K L+ EE ++GG DV Y I+ G C Q++ A +V+ + + +G P R
Sbjct: 635 NMSKAFGLVKKMEE-EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 369 VYSKLINKLLDSNNAERAYKL 389
Y+ +IN + +N A+++
Sbjct: 694 TYTCMINGFVSQDNLTEAFRI 714
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 173/402 (43%), Gaps = 36/402 (8%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
I + ++ +L R + GV +++ +GV ++ L+I+V++ + G + K
Sbjct: 200 IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 259
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFG 136
+ E G+ D N L+ + + A + N+M GK + V TYN V G K G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
++ + V EM G++PD TT+ L + G + E +VF M+ R+ PD ++
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 197 AMIFNFISVNDFDECMKYYN-----------------------------------EMLSN 221
+M+ F + D+ + Y+N EML
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
C ++ TY I+ L +R+ + +A ++F+EM + P + T+T I C G A
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ +++K + + + Y LL K+G T IW +M Y +++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNA 383
LC+ G L A V +E + K P+ ++ + +I S NA
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 1/333 (0%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
+R G + + ++ S VR G V A V+ ++ G+ + LN+++ LC+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 104 VGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+ + + ++ K + ++ TYN + +S G E +M M G +P T+
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
+ GL + G+ + A EVF M PD+ Y +++ D E K +++M S D
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
P+L ++ +++ R + AL F+ + G++P T I+ C G A+
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
+ + + GC + + Y +L L K G ++ EM E D +I G
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
C +G L+NA+ + ++ K + Y+ L++
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 1/344 (0%)
Query: 55 MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM 114
+ +++ ++V+A + +A + F L G +A N L+ L V A V+ +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 115 -KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+ V NV T N + K G+ ++ + +++ GV PD T+ + G M
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
+EAFE+ +M + P YN +I ++ + + EML + P+ TY +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ ++ VV+ ++F +M V+P + + G AL+ + + +G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
Y IL+ + G +N+ EM + G + DV Y I+ GLC L A
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+ E + P + LI+ N + A +LF K+K R
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 140/331 (42%), Gaps = 4/331 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
+FN +VK L D Y ++++ R+ S M + +M G D++ + ++
Sbjct: 397 YFN-SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
+ + +A ++F + E + D+ L +L+ C+ ++ A +F MK K + +V
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TYN + G+ K G + + + +M + + P ++ + + L G + EAF V+
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M +N +P + N+MI + + + + +M+S P+ +Y +I +R
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 243 VVDALQMFDEMLRH--GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+ A + +M G++P T + C A V+ +K G Y
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
++ I +EM + G+S D
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 90/224 (40%), Gaps = 18/224 (8%)
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L R+GR+ +A M R+ + N++ F ++C N
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTF------------------SNCGSN 164
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ +I ++ RK+ +A + F + G I L G A +Y+
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ RSG I++ I++ L K GK + ++QE G D+ Y +IS + G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+E A +M KGF P Y+ +IN L ERA ++F
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 90/239 (37%)
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ F + + +A ++ EA E F ++ + NA+I + + + + Y E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
+ + N+ T ++ AL + K+ ++ GV P T I S G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A + G + + Y ++ L K GK ++ EM G S D Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
++ C G + V + + P + +S +++ S N ++A F +K A
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 172/382 (45%), Gaps = 7/382 (1%)
Query: 7 WAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
W +K D+ ++ V++KAL R + +L DM G+ D + V+ ++
Sbjct: 183 WGIK-----PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE 237
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVAT 124
G + A+++ + E G + ++NV++ C+ V A + M + F + T
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
+N + G K G +M M +G PD T+ + GL + G + EA EV M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
R+C P+T YN +I N +E + + S P++ T+ +I L R
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
A+++F+EM G P T I LCS G AL + K+ SGC S+ Y L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
K K I++EM+ G S + Y +I GLC ++E+A +M++ + +G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 365 PSRLVYSKLINKLLDSNNAERA 386
P + Y+ L+ + ++A
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKA 559
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 174/391 (44%), Gaps = 2/391 (0%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
+++ +W + L D Y ++ L + M V G++ D+ ++++
Sbjct: 137 ILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLI 196
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVA 119
+ RA + AI + ++ G+ D + +++ E + A + M + +
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEME-ADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
++ + N + G+ K GR + ++EM DG PD TF + GL +AG + A E
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
+ M + PD YN++I + + E ++ ++M++ DC PN TY +I+ L
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
+ +V +A ++ + G+LP T I+ LC A+ ++++ R GC
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
Y +L+ L GK LN+ ++M+ G + V Y +I G C + A + +E
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
G + + Y+ LI+ L S E A +L
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 145/345 (42%), Gaps = 1/345 (0%)
Query: 47 NGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGA 106
+G D + +V+ +AGHV AI++ + + G + D N ++ LC+ V
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 107 ASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A V + M + + N TYN + K + E + + + + G+ PD TF ++
Sbjct: 349 AVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
GL A E+F M+ + C+PD YN +I + S DE + +M + C
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
++ TY +I + K +A ++FDEM HGV + T I LC A +
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
+ G Y LL + G +I + M G D+ Y +ISGLC
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G++E A ++ KG + Y+ +I L A LF
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF 633
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 152/365 (41%), Gaps = 6/365 (1%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ +V L + + ++ M G + D+ + V+ + G V +A++V
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + +T N L+ LC+ + V A+ + + K + +V T+N++ G
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
+ +EM + G PD T+ + ++ L G++DEA + M+ C Y
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I F N E + ++EM + N TY +I L + R+V DA Q+ D+M+
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P T + H C G A I + +GC + Y L+ L K G+
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS-----RLVY 370
+ +Q G + Y +I GL + A+ + E L + P R+V+
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 371 SKLIN 375
L N
Sbjct: 654 RGLCN 658
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 12/391 (3%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG---VEADLLMLSIVV 60
FF WA K P + +V L + + F + G++ +MR +E +L + +++
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLM 174
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
F A V KA++V + + G+ D LL LC+ V AS VF M+ K
Sbjct: 175 RRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPP 234
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
N+ + ++ GW + G+ E + V+ +M+ G+ PD F L G AG+M +A+++
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVND-FDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M++R +P+ Y +I DE M+ + EM CE ++ TYT +I+ +
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGT-ITCFIKHLCSYGPPF-AALVIYKKARRSGCTISM 297
+ + D+M + GV+P T + + H F L + +K +R GC +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAH--EKKEQFEECLELIEKMKRRGCHPDL 412
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
Y +++ KLG+ + +W EM+ G S V+ + +I+G + G L A +E
Sbjct: 413 LIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKE 472
Query: 358 ALHKGF--CPSRLVYSKLINKLLDSNNAERA 386
+ +G P L+N L+ + E A
Sbjct: 473 MVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 190/405 (46%), Gaps = 2/405 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P+ I ++ ++ L S + ++ M G + +L+ +VV+
Sbjct: 175 VALVDQMVEMGYRPDTI-TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
+ G A+ + + + D N ++ LC+ HV A ++F M+ K +
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV TY+++ +GR+++ +++ +M + P+ TF ++ + G+ EA +++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M +R+ PD YN+++ F + D+ + + M+S DC P++ TY +I +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
++V D ++F EM G++ T T T I+ L G A ++K+ G + Y
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
ILL L GK L +++ MQ+ D+ +Y +I G+C G++++ +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG P+ + Y+ +I+ L + AY L K+K L N+ Y
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 181/384 (47%), Gaps = 1/384 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y V+V L +R + +L M +EAD+++ + ++DS + HV A+ +F +
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G+ + + L+ CLC AS + + M + K+ N+ T+NA+ + K G+F
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E E++ +M + PD T+ + G R+D+A ++F M ++C PD YN +
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I F ++ + + EM + TYT +I L +A ++F +M+ GV
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T + + LC+ G AL ++ ++S + + Y ++ + K GK +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
++ + G +V Y +ISGLC+ L+ A ++++ G P+ Y+ LI L
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 379 DSNNAERAYKLFLKIKHARSLENA 402
+ + +L +++ R + +A
Sbjct: 587 RDGDKAASAELIREMRSCRFVGDA 610
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 3/306 (0%)
Query: 92 NVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEME 149
N+L+ C C RS + A ++ M K+ + ++ T +++ G+ R ++ ++ +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
G PD TF + GL + EA + M +R CQP+ Y ++ D D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
+ N+M + E ++ + II +L + R V DAL +F EM G+ P T + I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
LCSYG A + ++ + L+ K GK ++++M +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
D+ Y +++G C +L+ A + E + K P + Y+ LI S E +L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 390 FLKIKH 395
F ++ H
Sbjct: 423 FREMSH 428
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 122/285 (42%), Gaps = 1/285 (0%)
Query: 107 ASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A +F M K + ++ +N + +K +F+ + + ++M+ + T+ + +
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
R ++ A + M + +P ++++ + + + ++M+ P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ T+T +I L K +A+ + D M++ G P T + LC G AL +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
K + + + ++ L K LN+++EM+ G +V Y +IS LC+
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+ +A ++ + + K P+ + ++ LI+ + A KL+
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY---------------YN 216
++D+A +F M + P +N ++ + FD + YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 217 EMLSNDC--------------------EPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+++ C EP++ T + ++ +++ DA+ + D+M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P T T T I L + A+ + + + GC ++ Y +++ L K G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
LN+ +M+ +DV ++ II LC +++A+ + +E KG P+ + YS LI+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 377 L 377
L
Sbjct: 305 L 305
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 179/387 (46%), Gaps = 15/387 (3%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMG-VLRDMRVNGVEA--DLLMLSI 58
+ FFNW + ++ ++ LG K+F F + L + + E+ + + I
Sbjct: 65 LEFFNWVERESGFRHTTETFNRVIDILG--KYFEFEISWALINRMIGNTESVPNHVTFRI 122
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSV-FNSM--- 114
V +V A V +AI + L++ + +T N L+ LCE HV A + F
Sbjct: 123 VFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIG 181
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
G N +N + GWSK G + + + K+M+ +GV D ++ ++++ + ++G+
Sbjct: 182 NGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPW 241
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
+A +++ MK R + D YN +I + + ++ + EM CEPN+ T+ II
Sbjct: 242 KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTII 301
Query: 235 TALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
L ++ DA +M DEM + G P + T C L P L ++ + RSG
Sbjct: 302 KLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVR 358
Query: 295 ISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLV 354
M+ Y +L+ + + G +L +W+ M+E G + D Y +I L G L+ A
Sbjct: 359 PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREY 418
Query: 355 MEEALHKGFCPSRLVYSKLINKLLDSN 381
EE + +G P R +L+ K LD
Sbjct: 419 EEEMIERGLSPRR--RPELVEKSLDET 443
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 177/394 (44%), Gaps = 2/394 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V++ P D+ +Y IV + R S + +LR M V+AD+ S ++D
Sbjct: 178 VVLVDRMVENGCQP-DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
S R G + AI +F + G+ N L++ LC+ + + M + +
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV T+N + + K G+ E + KEM G++P+ T+ ++G R+ EA +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M C PD + ++I + V D+ MK + + N TY+ ++ +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ A ++F EM+ HGVLP T + LC G AL I++ ++S + + Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
++ + K GK N++ + G +V Y +ISGLC G L A +++ +
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G P+ Y+ LI L + + KL ++K
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 177/425 (41%), Gaps = 37/425 (8%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F ++ LP + R A+ R K F+ ++ + + +NG+ ++ L+I+++
Sbjct: 73 IALFQEMIRSRPLPSLVDFSRFF-SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
F R A V G + +LG DT N L+K L V A + + M +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V TYN++ G + G + ++++ME V D T+ ++ L R G +D A +F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 181 CSMKERNCQPDTAVYNAMI------------------------------FN-----FISV 205
M+ + + YN+++ FN F+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
E + Y EM++ PN+ TY ++ + ++ +A M D M+R+ P T
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
T IK C + +++ + G + Y IL+ + GK +++EM
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G DV Y ++ GLC+ G+LE A+ + E+ ++Y+ +I + E
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 386 AYKLF 390
A+ LF
Sbjct: 492 AWNLF 496
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 153/331 (46%), Gaps = 1/331 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ + +Y +V+ L + ++ +L+DM + +++ ++++D FV+ G + +A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGG 131
+++ + G++ + N L+ C ++ + A+++ + M + K + ++ T+ ++ G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ R ++ +V + + G+ + T+ + ++G ++G++ A E+F M PD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
Y ++ ++ ++ + ++ + + + YT II + + KV DA +F
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+ GV P T T I LC G A ++ +K G + Y L+ + G
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
+ EEM+ G+S+D + +I L
Sbjct: 558 DLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
+ D+A +F M P ++ F+ + + ++ N N+ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
+I R K A + ++++ G P T T IK L G A+V+ + +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
GC + Y ++ + + G L++ +M+E +DV Y II LC G ++ A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKL 377
+ + +E KG S + Y+ L+ L
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGL 273
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 182/402 (45%), Gaps = 2/402 (0%)
Query: 2 VTFFNW-AVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
V + W ++ +P ++ + +++ R S + L M G E ++ ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVA 119
+ F R V A+ +F + +G + N ++ LC+ V A + N M K +
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+V TYN++ G GR+++ R++ M + PD TF ++ + GR+ EA E
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+ M R+ PD Y+ +I+ + DE + + M+S C P++ TY+ +I +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+KV +++F EM + GV+ T T T I+ C G A I+++ G ++
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y +LL L GK L I +MQ+ G +D+ Y II G+C G++ +A +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLEN 401
+G P Y+ ++ L A LF K+K L N
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 100/286 (34%), Gaps = 35/286 (12%)
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
P F L + + + D ++ M+ + N ++ F + + +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+M+ EP++ T+ ++ R +V DAL MFD+M+ G P I LC
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK---------CGTLLNI------ 319
AL + + + G + Y L+ L G+ C T I
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 320 --------------------WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
+EEM D+ Y +I GLC +L+ A + +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG P + YS LIN S E KLF ++ + N Y
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 86/195 (44%)
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
Y M+ N I D+ + + M+ P++ ++R+++A+ + +K + ++++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
G+ T + C AL K + G S+ + LL + +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
L ++++M GY +V +Y II GLC Q++NA+ ++ G P + Y+ LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 375 NKLLDSNNAERAYKL 389
+ L S A ++
Sbjct: 229 SGLCSSGRWSDATRM 243
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 92/222 (41%)
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
R ++D++ ++F M + P A ++ ++ + +D + + +M NL
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
T ++ R ++ AL +M++ G P T + C + AL ++ +
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
G ++ Y ++ L K + L++ M++ G DV Y +ISGLC+ G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+A ++ + P ++ LI+ + A + +
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 2/354 (0%)
Query: 41 LRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCE 100
L +M +G D++ + ++ F R G KA ++ L G D NV++ C+
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 101 RSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
+ A SV + M V+ +V TYN + G+ + V+ M PD T+
Sbjct: 185 AGEINNALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 161 GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS 220
+ +E R + A ++ M++R C PD YN ++ DE +K+ N+M S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 221 NDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFA 280
+ C+PN+ T+ I+ ++ + +DA ++ +MLR G P T I LC G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 281 ALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIIS 340
A+ I +K + GC + +Y LL K K + E M G D+ Y +++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 341 GLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
LC G++E+AV ++ + KG P + Y+ +I+ L + +A KL +++
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 168/379 (44%), Gaps = 1/379 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
++ D+ +Y I+++L M VL M D++ +I++++ R V A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
+++ + + G D NVL+ +C+ + A N M NV T+N +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
GR+ + E+++ +M G +P TF + + L R G + A ++ M + CQP+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ YN ++ F D ++Y M+S C P++ TY ++TAL + KV DA+++ +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
++ G P T I L G A+ + + R Y L+ LS+ G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
K + + E + G + + I+ GLC Q + A+ + +++G P+ Y+
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 372 KLINKLLDSNNAERAYKLF 390
LI L A+ A +L
Sbjct: 559 ILIEGLAYEGMAKEALELL 577
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 168/388 (43%), Gaps = 5/388 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F V H +P DI +++ R +L + +G D++ ++++ +
Sbjct: 124 FLENMVYHGNVP-DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NV 122
+AG ++ A+ V L+ + ++ D N +L+ LC+ + A V + M + + +V
Sbjct: 183 CKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY + + +++ EM G PD T+ V + G+ + GR+DEA +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M CQP+ +N ++ + S + + K +ML P++ T+ +I L R+
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ A+ + ++M +HG P + + + C A+ ++ GC + Y
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
+L L K GK + I ++ G S + Y +I GL G+ A+ +++E K
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 363 FCPSRLVYSKLINKLLDSNNAERAYKLF 390
P + YS L+ L + A K F
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 150/348 (43%), Gaps = 1/348 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++++A R M +L +MR G D++ +++V+ + G + +AI+
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
++ G + N++L+ +C A + M K + +V T+N + +
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G ++++M G P+ ++ L G + +MD A E M R C PD Y
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N M+ ++ ++ N++ S C P L TY +I L + K A+++ DEM
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ P T T + + L G A+ + + R G + + +++ L K +
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
++ M G + Y +I GL G + A+ ++ E +KG
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 38/275 (13%)
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G+ + G+ + ++++ +E G PD T+ V + G +AG ++ A V M + P
Sbjct: 146 GFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSP 202
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D YN ++ + + M+ + ML DC P++ TYT +I A R V A+++
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
DEM R GCT + Y +L+ + K
Sbjct: 263 DEM-----------------------------------RDRGCTPDVVTYNVLVNGICKE 287
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
G+ + +M G +V + I+ +C+ G+ +A ++ + L KGF PS + +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ LIN L RA + K+ N+ +Y
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
++ +++ L R+ + +L M +G + + L + ++ F + + +AI+ +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV-ATYNAVAGGWSKFGRF 138
G D N +L LC+ V A + N + K V TYN V G +K G+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ +++ EM A + PD T+ + GL R G++DEA + F + +P+ +N++
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ D + + M++ C+PN +YT +I L +AL++ +E+ G+
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 259 L 259
+
Sbjct: 586 M 586
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 178/384 (46%), Gaps = 4/384 (1%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ D+ SY +++ L R F + V+ M G E D++ +S +++ F + V A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGG 131
I + + E+G D N ++ C+ V A +F+ M + V + TYN++ G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
GR+++ R+M++M + P+ TF ++ + G+ EA +++ M R PD
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
YN++I DE + + M++ C P++ TY +I + ++V + ++F
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
EM + G++ T T I+ G P AA I+ R ++ Y ILL L
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNW 395
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ L ++E MQ+ D+ Y +I G+C IG +E+A + KG P + Y+
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 372 KLINKLLDSNNAERAYKLFLKIKH 395
+I+ +++ L+ K++
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQE 479
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 33/277 (11%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y +V L +S ++RDM + + +++ + V+D FV+ G S+A++++
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ ++ D N L+ LC V A + + M K +V TYN + G+ K
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER--------- 186
R +E ++ +EM G+ D T+ ++G +AGR D A E+F M R
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSIL 387
Query: 187 ------------------NCQP-----DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
N Q D YN +I + + ++ + +
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+P++ +YT +I+ R+R+ + ++ +M G+LP
Sbjct: 448 KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 124/298 (41%), Gaps = 4/298 (1%)
Query: 109 SVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGL 167
S+F+ M+ + ++ +YN V + RF V+ +M G PD T + G
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 168 GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNL 227
+ R+ +A ++ M+E +PD +YN +I + ++ ++ ++ M + +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 228 DTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK 287
TY ++ L + DA ++ +M+ ++P T T I G A+ +Y++
Sbjct: 210 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 288 ARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQ 347
R + Y L+ L G+ + + M G DV Y +I+G C +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 348 LENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
++ + E +G + Y+ +I + + A ++F ++ S N R Y
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTY 384
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 96/218 (44%)
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
++E ++FC M + P ++ ++ ++D + ++ M +L +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
+I L R + V AL + +M++ G P T++ I C F A+ + K G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
+ Y ++ K+G + +++ M+ G +D Y +++GLC G+ +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+M + + + P+ + ++ +I+ + A KL+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 179/375 (47%), Gaps = 2/375 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W+ K + +Y +++++ + + + M ++ MR + ++ IV+ +
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKY 178
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA 123
RA V +AI F + + + + A N LL LC+ +V A VF +M+ + +
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK 238
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY+ + GW K + V +EM G PD T+ + ++ L +AGR+DEA + SM
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM 298
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
C+P T +Y+ ++ + + N +E + + EM + + ++ + +I A + ++
Sbjct: 299 DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+ ++ EM GV P + + ++HL G A +++K + C + Y ++
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMV 417
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ + + T +W+ M++ G + + +I+GLC + A +++EE + G
Sbjct: 418 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Query: 364 CPSRLVYSKLINKLL 378
PS + + +L L+
Sbjct: 478 RPSGVTFGRLRQLLI 492
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 104/235 (44%), Gaps = 1/235 (0%)
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
TF + + RA ++DEA F M++ + P+ +N ++ + + + + M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ P+ TY+ ++ + + A ++F EM+ G P T + + LC G
Sbjct: 230 -RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
AL I + S C + Y +L+ + ++ + EM+ G +DV V+ +
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
I C +++N V++E KG P+ + ++ L++ + A+ +F K+
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 179/403 (44%), Gaps = 3/403 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF P LP + R++ R++ + + + M + G+ DL +I++ F
Sbjct: 59 FFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIY-FSQKMELYGISHDLYSFTILIHCF 116
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
R +S A+ V G + +LG LL C + +G A S+ M K NV
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
YN + G K G N ++ EME G+ D T+ L GL +GR +A +
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M +R+ PD + A+I F+ + DE + Y EM+ + +PN TY II L +
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ DA + FD M G P T I C + + ++++ G + Y
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
L+ ++GK L+I+ M + D+ + ++ GLC G++E+A++ ++
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 363 FCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ Y+ +I+ L ++ E+A++LF ++ +AR Y
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 170/394 (43%), Gaps = 1/394 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V +F+ ++ + D+ S+ +++ R SF + VL M G E ++ ++
Sbjct: 90 VIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLH 149
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
F + A + + + G + N L+ LC+ + A + N M+ K +
Sbjct: 150 GFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V TYN + G GR+++ R++++M + PD TF ++ + G +DEA E++
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + + P+ YN++I + K ++ M S C PN+ TY +I+ +
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
R V + +++F M G T I C G AL I+ T + +
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
ILL L G+ + L +++M+E + Y +I GLC ++E A +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+G P Y+ +I L + A +L ++K
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 1/292 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++ L D+ +Y ++ L +S +LRDM + D++ + ++D FV+ G+
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNA 127
+ +A +++ + + ++ + N ++ LC + A F+ M K F NV TYN
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ G+ KF +E ++ + M +G D T+ + G + G++ A ++FC M R
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
PD + ++ + + + +++M ++ + Y +I L + KV A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++F + GV P T T I LC GP A + ++ + G M A
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%)
Query: 202 FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
F+ F++ + EM+ + P++ +TR++TA R+ + +M +G+
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 262 TGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWE 321
+ T I C AL + K + G S+ + LL + + G ++
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 322 EMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSN 381
M + GY +V VY +I GLC G+L A+ ++ E KG + Y+ L+ L S
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 382 NAERAYKLF 390
A ++
Sbjct: 226 RWSDAARML 234
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 1/348 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y V+V L +R +L M +EA++++ S V+DS + H A+ +F +
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G+ + + L+ CLC AS + + M + K+ NV T+NA+ + K G+
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E E++ EM + PD T+ + G R+DEA +F M ++C P+ YN +
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I F DE ++ + EM N TYT +I + R +A +F +M+ GV
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T + LC G A+V+++ +RS ++ Y I++ + K GK +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
++ + G DV +Y +ISG C G E A + + G P
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 174/386 (45%), Gaps = 1/386 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ ++ +Y +++ RR S + +L M G E ++ LS +++ + +S A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
+ + + E+G DT L+ L + A ++ + M + N+ TY V G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
K G + ++ +MEA + + + ++ L + D+A +F M+ + +P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
Y+++I + + + + ++M+ PN+ T+ +I A ++ K+V+A +++D
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
EM++ + P T + I C + A +++ C ++ Y L+ K
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ + ++ EM + G + Y +I G +NA +V ++ + G P+ + Y+
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 372 KLINKLLDSNNAERAYKLFLKIKHAR 397
L++ L + E+A +F ++ ++
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSK 500
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 3/329 (0%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFG 136
+ LG++ + N+L+ C C RS + A ++ M K+ + ++ T +++ G+
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM-KLGYEPSIVTLSSLLNGYCHGK 169
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
R ++ ++ +M G PD TF + GL + EA + M +R CQP+ Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ D D N+M + E N+ Y+ +I +L + R DAL +F EM
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
GV P T + I LC+Y A + ++ + L+ K GK
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+++EM + D+ Y +I+G C +L+ A + E + K P+ + Y+ LIN
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 377 LLDSNNAERAYKLFLKIKHARSLENARNY 405
+ + +LF ++ + N Y
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ L + +S +L DM + +++ + ++D+FV+ G + +A +++ +
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRF 138
+ ++ D + L+ C + A +F M K F NV TYN + G+ K R
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 139 NE-----------------------------------IERVMKEMEADGVAPDCTTFGVF 163
+E + V K+M +DGV P+ T+
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 164 LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
L+GL + G++++A VF ++ +P YN MI ++ + +
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
+P++ Y +I+ R+ +A +F +M G LP +GT
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 123/285 (43%), Gaps = 1/285 (0%)
Query: 107 ASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A +F M K + ++ +N + +K +F+ + + ++M+ G++ + T+ + +
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
R ++ A + M + +P ++++ + + + ++M+ P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ T+T +I L K +A+ + D M++ G P T + LC G A +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
K + ++ Y ++ L K LN++ EM+ G +V Y +IS LCN
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ +A ++ + + + P+ + ++ LI+ + A KL+
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 99/254 (38%), Gaps = 35/254 (13%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
++D+A +F M + P +N ++ + FD + +M NL TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 232 RIITALLRR-----------------------------------RKVVDALQMFDEMLRH 256
+I RR +++ DA+ + D+M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P T T T I L + A+ + + + GC ++ Y +++ L K G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
N+ +M+ ++V +Y +I LC ++A+ + E +KG P+ + YS LI+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 377 LLDSNNAERAYKLF 390
L + A +L
Sbjct: 305 LCNYERWSDASRLL 318
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 178/418 (42%), Gaps = 36/418 (8%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+++ +P + +Y +++ RR + VL M G E +++ LS +++ + +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLK----------------------C--------- 97
+S+A+ + + G +T N L+ C
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 98 ----LCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
LC+R A ++ N M +GK+ V YN + G K+ ++ + KEME G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+ P+ T+ + L GR +A + M ER PD ++A+I F+ E
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
K Y+EM+ +P++ TY+ +I ++ +A QMF+ M+ P T IK
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
C Y + ++++ + G + Y IL+ L + G C I++EM G ++
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
Y ++ GLC G+LE A++V E P+ Y+ +I + + E + LF
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 173/383 (45%), Gaps = 4/383 (1%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y V+V L +R +L M +E +L+ + ++D + H+ A+ +F
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
+ G+ + + L+ CLC AS + + M + K+ +V T++A+ + K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ E E++ EM + P T+ + G R+DEA ++F M ++C PD Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I F +E M+ + EM N TY +I L + A ++F EM+
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
GV P T + LC G A+V+++ +RS ++ Y I++ + K GK
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+++ + G DV Y +ISG C G E A + +E G P+ Y+ LI
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 376 KLLDSNNAERAYKLFLKIKHARS 398
L + E + +L IK RS
Sbjct: 580 ARLRDGDREASAEL---IKEMRS 599
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 174/369 (47%), Gaps = 1/369 (0%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
M ++ M G + DL+ +VV+ + G A + + + + N ++
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 98 LCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC+ H+ A ++F M+ K + NV TY+++ +GR+++ R++ +M + PD
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TF ++ + G++ EA +++ M +R+ P Y+++I F + DE + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
M+S C P++ TY +I + ++V + +++F EM + G++ T T I+ L G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
A I+K+ G ++ Y LL L K GK + ++E +Q + Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+I G+C G++E+ + KG P + Y+ +I+ + E A LF ++K
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 397 RSLENARNY 405
+L N+ Y
Sbjct: 566 GTLPNSGCY 574
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 144/355 (40%), Gaps = 3/355 (0%)
Query: 53 LLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN 112
++ S ++ + + I + + LG+ + ++L+ C C RS + A +V
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 113 SMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRA 170
M K+ + N+ T +++ G+ R +E ++ +M G P+ TF + GL
Sbjct: 141 KMM-KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
+ EA + M + CQPD Y ++ D D N+M EP + Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
II L + + + DAL +F EM G+ P T + I LC+YG A +
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
+ + L+ K GK +++EM + + Y +I+G C +L+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 351 AVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
A + E + K P + Y+ LI E ++F ++ + N Y
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 139/317 (43%), Gaps = 2/317 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L DM + D+ S ++D+FV+ G + +A +++ + + ++ + L+ C
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 100 ERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ A +F M K F +V TYN + G+ K+ R E V +EM G+ +
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ + ++GL +AG D A E+F M P+ YN ++ ++ M + +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ EP + TY +I + + KV D +F + GV P I C G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
A ++K+ + G + Y L+ + G + +EM+ G++ D +
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-L 611
Query: 339 ISGLCNIGQLENAVLVM 355
++ + + G+L+ + L M
Sbjct: 612 VTNMLHDGRLDKSFLDM 628
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 39/267 (14%)
Query: 163 FLEGLGRAG----RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD------ECM 212
+ E L R G ++D+A +F M + P ++ ++ +N FD E M
Sbjct: 48 YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 107
Query: 213 K-------YYNEMLSNDC----------------------EPNLDTYTRIITALLRRRKV 243
+ +Y + +C EPN+ T + ++ +++
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+A+ + D+M G P T T I L + A+ + + GC + Y ++
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ L K G N+ +M++G V +Y II GLC +++A+ + +E KG
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLF 390
P+ + YS LI+ L + A +L
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLL 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 2/166 (1%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+P +I +Y ++ L + M V ++ + +E + +I+++ +AG V
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGG 131
+F NL+ G+ D A N ++ C + A ++F MK N YN +
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ G ++KEM + G A D +T G+ L GR+D++F
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 180/394 (45%), Gaps = 2/394 (0%)
Query: 2 VTFFNWAVKHPALP-EDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
+ FFNWA + Y ++ G+ + F ++ M+ VE + +I++
Sbjct: 134 LAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILI 193
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
+VRAG S+A+ F + + G D A ++++ L + A S F+S+K +
Sbjct: 194 RRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP 253
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V Y + GW + G +E E+V KEM+ G+ P+ T+ + ++ L R G++ A +VF
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + C P+ +N ++ + ++ ++ YN+M CEP+ TY +I A R
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRD 373
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+ +A+++ + M++ T +++ A +Y K + C + Y
Sbjct: 374 ENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTY 433
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL- 359
IL+ +L + +EM + +V Y +++ C +G NA + +E +
Sbjct: 434 NILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVE 493
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
K PS +Y ++ +L + ++ +L K+
Sbjct: 494 EKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 4/273 (1%)
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
YN + K +F+ ++ M++ V TF + + RAG EA F M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
+ C PD ++ +I N E +++ L + EP++ YT ++ R ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
+A ++F EM G+ P T + I LC G A ++ SGC + + L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
K G+ +L ++ +M++ G D Y ++I C LENAV V+ + K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 365 PSRLVYSKL---INKLLDSNNAERAYKLFLKIK 394
+ ++ + I K D N A R Y ++ K
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 4/361 (1%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
M ++ M G++ D++M + ++DS + GHV+ A+ +F + G+ D L+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 98 LCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC A S+ M K K+ +V T+NA+ + K G+F + E + EM +AP+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
T+ + G G +DEA ++F M+ + C PD Y ++I F D+ MK +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
EM N TYT +I + K A ++F M+ GV P T + LC G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 277 PPFAALVIY---KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVE 333
AL+I+ +K G ++ Y +LL L GK L ++E+M++ +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 334 VYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
Y II G+C G+++NAV + KG P+ + Y+ +I+ L A+ LF K+
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 394 K 394
K
Sbjct: 522 K 522
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 169/391 (43%), Gaps = 5/391 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F V+ LP I + ++ + + K F ++ + +++ GV DL +++++ F
Sbjct: 59 LFTHMVESRPLPSII-DFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
++ A G + +LG D L+ C + + A S+ N M + + +V
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
Y + K G N + +ME G+ PD + + GL +GR +A +
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M +R +PD +NA+I F+ F + + YNEM+ PN+ TYT +I
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
V +A QMF M G P T I C A+ I+ + + G T + Y
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK- 361
L+ ++GK ++ M G ++ Y ++ LC G+++ A+++ E+ +
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 362 --GFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G P+ Y+ L++ L + E+A +F
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVF 448
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 150/340 (44%), Gaps = 3/340 (0%)
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVA 129
I + +L +G++ D N+L+ C C+ S ASS M K+ F ++ T+ ++
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM-KLGFEPDIVTFTSLI 149
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
G+ R E ++ +M G+ PD + ++ L + G ++ A +F M+ +
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR 209
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
PD +Y +++ + + + M +P++ T+ +I A ++ K +DA ++
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
++EM+R + P T T I C G A ++ GC + AY L+ K
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 310 LGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLV 369
K + I+ EM + G + + Y +I G +G+ A V + +G P+
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 370 YSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYWRSN 409
Y+ L++ L + ++A +F ++ A N W N
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 4/285 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+ D+ ++ ++ A + F + +M + ++ + +++ F G V +A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGW 132
Q+F + G D A L+ C+ V A +F M K + N TY + G+
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN---CQ 189
+ G+ N + V M + GV P+ T+ V L L G++ +A +F M++R
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
P+ YN ++ ++ + + +M + + + TYT II + + KV +A+ +
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
F + GV P T T I L G A V+++K + G +
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 94/231 (40%), Gaps = 3/231 (1%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
+ +EA ++F M E P + ++ + FD + + + +L T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
++ + + A +M++ G P T T I C A+ + +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G + Y ++ L K G L+++++M+ G DV +Y +++GLCN G+ +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSN---NAERAYKLFLKIKHARSL 399
++ + P + ++ LI+ + +AE Y +++ A ++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 163/370 (44%), Gaps = 6/370 (1%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMR-VNGVEADLLMLSIVVD 61
TFF WA K + Y ++ LG+ + F ++ +MR + + L I++
Sbjct: 146 TFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIR 205
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN 121
+ V KAI F + + LL LC +V A + K K F+
Sbjct: 206 KYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD 265
Query: 122 VATYNAVAGGWSK-FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
++N V GW G E ERV EM GV D ++ + + G +++ ++F
Sbjct: 266 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 325
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND-CEPNLDTYTRIITALLR 239
MK+ +PD VYNA++ + E M EPN+ TY +I L +
Sbjct: 326 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 385
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
RK +A Q+FDEML G+ P T F++ L + F L K R+ GC ++E
Sbjct: 386 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLA---KMRKMGCEPTVET 442
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y +L+ +L + +L +W+EM+E D+ Y +I GL G++E A +E
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 360 HKGFCPSRLV 369
KG P+ V
Sbjct: 503 DKGMRPNENV 512
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 171/349 (48%), Gaps = 1/349 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G + + + V++ ++G + A+++ + E + D ++++ LC+ + A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
++FN M+ K + N+ TYN + GG+ GR+++ +++++M + P+ TF V ++
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G++ EA E+ M R PDT Y ++I F N D+ + + M+S C+PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ T+ +I + ++ D L++F +M GV+ T T I+ C G A +++
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ ++ YKILL L G+ L I+E++++ D+ +Y II G+CN
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
++++A + KG P Y+ +I L A LF K++
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 165/377 (43%), Gaps = 1/377 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ + + + M +LR M ++ D + SI++D + G + A +F +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G+ + N+L+ C + + M K K+ NV T++ + + K G+
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E E + KEM G+APD T+ ++G + +D+A ++ M + C P+ +N +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + N D+ ++ + +M + TY +I K+ A ++F EM+ V
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T + LC G AL I++K +S + + Y I++ + K +
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
++ + G V+ Y +I GLC G L A L+ + G P Y+ LI L
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 379 DSNNAERAYKLFLKIKH 395
+A ++ KL ++K
Sbjct: 590 GDGDATKSVKLIEELKR 606
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 184/432 (42%), Gaps = 37/432 (8%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F + LP I R + A+ + K + ++ + + M + G+ +L LSI+++
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSR-LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
F R + A G + +LG +T + L+ LC V A + + M +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
++ T N + G G+ E ++ +M G P+ T+G L + ++G+ A E+
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 181 CSMKERNCQPDTA-----------------------------------VYNAMIFNFISV 205
M+ERN + D YN +I F +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
+D+ K +M+ PN+ T++ +I + ++ K+ +A ++ EM+ G+ P T T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
T I C A + GC ++ + IL+ K + L ++ +M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G +D Y +I G C +G+L A + +E + + P+ + Y L++ L D+ +E+
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 386 AYKLFLKIKHAR 397
A ++F KI+ ++
Sbjct: 492 ALEIFEKIEKSK 503
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 37/255 (14%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS--------------------------- 204
+ D+A ++F M P T + + +F+ I+
Sbjct: 68 KADDAIDLFRDMIHSRPLP-TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 205 ---VNDFDECMKY------YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+N F C K +++ EPN T++ +I L +V +AL++ D M+
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P TI + LC G A+++ K GC + Y +L + K G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ + +M+E D Y II GLC G L+NA + E KG + + Y+ LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 376 KLLDSNNAERAYKLF 390
++ + KL
Sbjct: 307 GFCNAGRWDDGAKLL 321
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 176/372 (47%), Gaps = 2/372 (0%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG-HVSKAIQVFGNL 79
+ ++VK+ R + ++ + +G +L + V+D+ +R+ ++S A VF +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRF 138
E ++ + N+L++ C ++ A ++F+ M+ K NV TYN + G+ K +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
++ ++++ M G+ P+ ++ V + GL R GRM E V M R D YN +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + +F + + + EML + P++ TYT +I ++ + + A++ D+M G+
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T T + G A + ++ +G + S+ Y L+ GK +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
+ E+M+E G S DV Y ++SG C ++ A+ V E + KG P + YS LI
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 379 DSNNAERAYKLF 390
+ + A L+
Sbjct: 497 EQRRTKEACDLY 508
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 169/405 (41%), Gaps = 37/405 (9%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+T F+ LP ++ +Y ++ + + +LR M + G+E +L+ ++V++
Sbjct: 225 LTLFDKMETKGCLP-NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
R G + + V +N G + D N L+K C+ + A + M + +
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V TY ++ K G N + +M G+ P+ T+ ++G + G M+EA+ V
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + P YNA+I ++ + +M P++ +Y+ +++ R
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
V +AL++ EM+ G+ P T T + I+ C ++ + C
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE-----------QRRTKEAC------- 505
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
+++EEM G D Y +I+ C G LE A+ + E +
Sbjct: 506 -----------------DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG P + YS LIN L + A +L LK+ + S+ + Y
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 154/356 (43%), Gaps = 22/356 (6%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++H P I +Y ++ ++ + + M L MRV G+ + + +VD F + G+
Sbjct: 337 LRHGLTPSVI-TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
+++A +V +N+ G + N L+ C + A +V MK K ++ +V +Y+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
V G+ + +E RV +EM G+ PD T+ ++G R EA +++ M
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
PD Y A+I + D ++ ++ +NEM+ P++ TY+ +I L ++ + +A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++ ++ +P T I++ CS I ++ L+
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIEN-CS-------------------NIEFKSVVSLIKGF 615
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
G ++E M + D Y +I G C G + A + +E + GF
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 171/376 (45%), Gaps = 13/376 (3%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF WA + D +Y ++ L + + F M+ VL +M G+ + +I + +F
Sbjct: 181 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSV-FNSMKGKVAFNV 122
A KA+ +F + + E +N LL L R+ +G + V F+ +K + N+
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNM 298
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY + GW + E R+ +M G+ PD V LEGL R+ + +A ++F
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
MK + P+ Y MI +F + + ++Y+++M+ + +P+ YT +IT ++K
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ ++ EM G P T IK + + P A IY K ++ S+ + +
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 303 L-----LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+ + R ++G+ +WEEM + G D Y +I GL G+ A +EE
Sbjct: 479 IMKSYFMARNYEMGRA-----VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 358 ALHKGFCPSRLVYSKL 373
L KG + Y+K
Sbjct: 534 MLDKGMKTPLIDYNKF 549
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 139/350 (39%), Gaps = 9/350 (2%)
Query: 37 MMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSK-AIQVFGNLNE-LGMNRDTEALNVL 94
M VL +M+++ L ++V+ R H K A + F E G D+ N +
Sbjct: 148 MEAVLDEMKLD------LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSM 201
Query: 95 LKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
+ L + SV M K + T+ ++ + + + M+
Sbjct: 202 MSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFK 261
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
T L+ LGRA EA +F +KER P+ Y ++ + V + E +
Sbjct: 262 IGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+N+M+ +P++ + ++ LLR RK DA+++F M G P + T I+ C
Sbjct: 321 WNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
A+ + SG Y L+ K T+ + +EMQE G+ D +
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 440
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
Y +I + N E+A + + + PS ++ ++ + N E
Sbjct: 441 YNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+ DM G++ D++ +++++ +R+ S AI++F + G + + ++++ C
Sbjct: 320 IWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 100 ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
++S + A F+ M + + A Y + G+ + + + ++KEM+ G PD
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ ++ + + A ++ M + +P +N ++ ++ +++ + EM
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ P+ ++YT +I L+ K +A + +EML G+ P F G P
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Query: 279 FAALVIYKKARRSG 292
+ ++A+ SG
Sbjct: 560 EIFEELAQRAKFSG 573
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 173/362 (47%), Gaps = 12/362 (3%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G+E D++ S +V+ F + + A+ V G + ++G+ RD +L+ LC+ V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
V MK + ++ NV TY+++ G K GR + ER + EM++ + P+ TF ++
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G++ + V+ M + + P+ Y+++I+ N DE +K + M+S C PN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ TY+ + + +V D +++ D+M + GV T + IK G AL ++
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+G ++ +Y I+L L G+ L+ +E MQ+ D+ Y +I G+C
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKL------LDSNNAERAYKLFLKIKHARSLE 400
++ A + + K P Y+ +I +L +++ R Y+ KH R E
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQ-----KHVRQNE 362
Query: 401 NA 402
+A
Sbjct: 363 SA 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 120/285 (42%)
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
MK + ++ T +++ G+ + V +ME G+ D + ++ L + +
Sbjct: 5 MKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV 64
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
A EV MK+R P+ Y+++I + + +EM S PN+ T++ +
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 124
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I A +R K+ ++ M++ + P T + I LC + A+ + GC
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
T ++ Y L K + + + ++M + G +++ +I G G+++ A+
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARS 398
V G P+ Y+ ++ L + E+A F ++ R+
Sbjct: 245 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 97/246 (39%), Gaps = 35/246 (14%)
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
M +M G+ PD T + G + + +A V M++ + D V +I
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 205 VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
++ M PN+ TY+ +IT L + ++ DA + EM + P T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
F+AL+ +AY +K GK + ++++ M
Sbjct: 121 --------------FSALI--------------DAY-------AKRGKLSKVDSVYKMMI 145
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
+ +V Y +I GLC +++ A+ +++ + KG P+ + YS L N S+ +
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 385 RAYKLF 390
KL
Sbjct: 206 DGIKLL 211
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L DM GV A+ + + ++ + +AG + A+ VFG + G+ + + N++L L
Sbjct: 210 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLF 269
Query: 100 ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
V A S F M K + ++ TY + G K E + +++ V PD
Sbjct: 270 ANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFK 329
Query: 159 TFGVFLEGLGRAGRMDEA 176
+ + + L RAG EA
Sbjct: 330 AYTIMIAELNRAGMRTEA 347
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 178/391 (45%), Gaps = 4/391 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F+ VK P I + ++ A+ + K + ++ + + M V G+ DL +IV++
Sbjct: 70 IDLFSDMVKSRPFPS-IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF- 120
F VS A+ + G + +LG D + L+ C R+ V A S+ + M ++ +
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-EIGYK 187
Query: 121 -NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
++ YNA+ K R N+ KE+E G+ P+ T+ + GL + R +A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M ++ P+ Y+A++ F+ E + + EM+ +P++ TY+ +I L
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++ +A QMFD M+ G L + I C + ++++ + G +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ + G + +M G S D+ Y ++ GLC+ G+LE A+++ E+
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ + Y+ +I + + E A+ LF
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 169/368 (45%), Gaps = 1/368 (0%)
Query: 35 SFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVL 94
S + +L M G E D + + +V+ F R VS A+ + + E+G D A N +
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 95 LKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
+ LC+ V A F ++ K + NV TY A+ G R+++ R++ +M +
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
P+ T+ L+ + G++ EA E+F M + PD Y+++I + DE +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 214 YYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
++ M+S C ++ +Y +I + ++V D +++F EM + G++ T T I+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 274 SYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVE 333
G A + + G + + Y ILL L G+ L I+E+MQ+ D+
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 334 VYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
Y +I G+C G++E A + KG P + Y+ +++ L L+ K+
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 394 KHARSLEN 401
K ++N
Sbjct: 497 KQEGLMKN 504
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 1/300 (0%)
Query: 107 ASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A +F+ M F ++ +N + K +++ + + K+ME G+ D TF + +
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
++ A + M + +PD +++ F N + + ++M+ +P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
++ Y II +L + ++V DA F E+ R G+ P T T + LC+ A +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
+ T ++ Y LL K GK ++EEM D+ Y +I+GLC
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+++ A + + + KG + Y+ LIN + E KLF ++ + N Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 130/317 (41%), Gaps = 46/317 (14%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++ + ++ +Y +V L +S +L DM + +++ S ++D+FV+ G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK----------- 117
V +A ++F + + ++ D + L+ LC + A+ +F+ M K
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 118 -------------------------VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
+ N TYN + G+ + G ++ + +M+ G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
++PD T+ + L GL G +++A +F M++R D Y +I +E
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP-----PTGTITC 267
+ + +P++ TYT +++ L + + + ++ +M + G++ G IT
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL 515
Query: 268 ---FIKHL--CSYGPPF 279
IK + C Y P
Sbjct: 516 SAELIKKMLSCGYAPSL 532
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 96/222 (43%)
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
R ++++A ++F M + P +N ++ + + +D + +M +L
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
T+ +I +V AL + +ML+ G P TI + C A+ + K
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
G + AY ++ L K + + ++E++ G +V Y +++GLCN +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+A ++ + + K P+ + YS L++ + + A +LF
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 179/389 (46%), Gaps = 23/389 (5%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
MGVL M V D++ + ++D R+G+ A ++ +N+ G+ D ++
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 98 LCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC+ V A +F+S++ K V NV Y A+ G+ K G+ +E ++++M + P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TF + GL G++ EA + M + QP + +I + DFD +
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
+MLS+ +P+ TYT I R +++DA M +M +GV P T + IK G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRL--SKLGK--------CG--------TLLN 318
A + K+ R +GC S + L+ L K GK C T++
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE 746
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE-ALHKGFCPSRLVYSKLIN-- 375
+ E+M E + + + YE +I G+C +G L A V + ++G PS LV++ L++
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 376 -KLLDSNNAERAYKLFLKIKHARSLENAR 403
KL N A + + + H LE+ +
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCK 835
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 178/372 (47%), Gaps = 2/372 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++ + +I +Y V++ +L + F +L M G+ +++ + +++ + + G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNA 127
+ A+ V + ++ +T N L+K C +S+V A V N M + KV +V TYN+
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ G + G F+ R++ M G+ PD T+ ++ L ++ R++EA ++F S++++
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
P+ +Y A+I + DE +MLS +C PN T+ +I L K+ +A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
+ ++M++ G+ P T T I L G A +++ SG Y +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
+ G+ ++ +M+E G S D+ Y +I G ++GQ A V++ G PS+
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 368 LVYSKLINKLLD 379
+ LI LL+
Sbjct: 708 HTFLSLIKHLLE 719
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 169/378 (44%), Gaps = 2/378 (0%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
+ +Y V++K+L + S + ++++M G++ ++ ++++DS KA ++ G
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFG 136
+ E G+ + N L+ C+R + A V M+ K++ N TYN + G+ K
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
++ V+ +M V PD T+ ++G R+G D A+ + M +R PD Y
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+MI + +E ++ + PN+ YT +I + KV +A M ++ML
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
LP + T I LC+ G A ++ +K + G ++ IL+ RL K G
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ +++M G D Y I C G+L +A +M + G P YS LI
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 377 LLDSNNAERAYKLFLKIK 394
D A+ + +++
Sbjct: 682 YGDLGQTNFAFDVLKRMR 699
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%)
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
K + YN + ++FG +E+++V EM D V P+ T+ + G + G ++EA
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
+ + E PD Y ++I + D D K +NEM C N YT +I
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
L R++ +A+ +F +M P T T IK LC AL + K+ +G +
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
+ Y +L+ L K + +M E G +V Y +I+G C G +E+AV V+E
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 357 EALHKGFCPSRLVYSKLINKLLDSN 381
+ P+ Y++LI SN
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSN 442
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 166/396 (41%), Gaps = 37/396 (9%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
IG Y ++ +L R M V +M + V ++ + +V+ + + G+V +A Q
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM------KGKVAF----------- 120
+ E G++ D L+ C+R + +A VFN M + +VA+
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 121 -------------------NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
V TY + R +E ++KEME G+ P+ T+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
V ++ L + ++A E+ M E+ P+ YNA+I + ++ + M S
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
PN TY +I + V A+ + ++ML VLP T I C G +A
Sbjct: 423 KLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ G Y ++ L K + ++++ +++ G + +V +Y +I G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
C G+++ A L++E+ L K P+ L ++ LI+ L
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 2/300 (0%)
Query: 92 NVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA 150
N LL L V V+ M + KV N+ TYN + G+ K G E + + ++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 151 DGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDE 210
G+ PD T+ + G + +D AF+VF M + C+ + Y +I DE
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIK 270
M + +M ++C P + TYT +I +L + +AL + EM G+ P T T I
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 271 HLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSS 330
LCS A + + G ++ Y L+ K G +++ E M+ S
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 331 DVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ Y +I G C + A+ V+ + L + P + Y+ LI+ S N + AY+L
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 163/394 (41%), Gaps = 2/394 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L D +Y ++ +RK V +M + G + + + ++ A + +A
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
+ +F + + VL+K LC A ++ M+ + N+ TY +
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+F + ++ +M G+ P+ T+ + G + G +++A +V M+ R P+
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
T YN +I + N + M N+ML P++ TY +I R A ++
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
M G++P T T I LC A ++ + G ++ Y L+ K G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
K + E+M + + +I GLC G+L+ A L+ E+ + G P+ +
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 372 KLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
LI++LL + + AY F ++ + + +A Y
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 165/425 (38%), Gaps = 57/425 (13%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L D +Y ++ +L + K + + GV +++M + ++D + +AG V +A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 73 IQVF-------------------------GNLNE----------LGMNRDTEALNVLLKC 97
+ G L E +G+ +L+
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 98 LCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
L + A S F M + TY + + GR + E +M +M +GV+PD
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN---------- 206
T+ ++G G G+ + AF+V M++ C+P + ++I + + +
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 207 --------DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH-G 257
+FD ++ +M+ + PN +Y ++I + + A ++FD M R+ G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P + C A + G +E+ K+L+ L K G+
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP-SRLVYSKLINK 376
++++ + + GY D ++ II G+ G +E A + + K C S YS LI
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVE-AFYELFNVMEKNGCKFSSQTYSLLIEG 910
Query: 377 LLDSN 381
DS
Sbjct: 911 PPDST 915
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 44/286 (15%)
Query: 157 CTTFG--VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
C + G +++ L R DE FE+ + YN ++ + DE +
Sbjct: 153 CDSVGDALYVLDLCRKMNKDERFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQV 205
Query: 215 YNEMLSNDCEPNLDTYTRII-------------------------------TALL----R 239
Y EML + PN+ TY +++ T+L+ +
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
R+ + A ++F+EM G T I LC A+ ++ K + C ++
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y +L+ L + LN+ +EM+E G ++ Y +I LC+ + E A ++ + L
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG P+ + Y+ LIN E A + ++ + N R Y
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 175/396 (44%), Gaps = 2/396 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P ++ +Y ++ + + + M +LR M ++ D + SI++D
Sbjct: 213 VVLIDRMVETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
+ G + A +F + G D N L+ C + + M K K++
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV T++ + + K G+ E ++++KEM G+AP+ T+ ++G + R++EA ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + C PD +N +I + N D+ ++ + EM N TY ++ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ A ++F EM+ V P + + LC G AL I+ K +S + + Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
I++ + K +++ + G D Y +IS LC L A ++ +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+G P L Y+ LI L ++A A +L ++K +
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 184/432 (42%), Gaps = 37/432 (8%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V F ++ LP I R + A+ + K + ++ + + M G+ + LSI+++
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNR-LFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM------- 114
F R +S A G + +LG DT N LL LC V A + + M
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 115 --------------KGKVAF---------------NVATYNAVAGGWSKFGRFNEIERVM 145
GKV+ N TY V K G+ ++
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 146 KEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISV 205
++ME + D + + ++GL + G +D AF +F M+ + + D YN +I F +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
+D+ K +M+ PN+ T++ +I + ++ K+ +A Q+ EM++ G+ P T T
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
I C A+ + GC + + IL+ K + L ++ EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G ++ Y ++ G C G+LE A + +E + + P + Y L++ L D+ E+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 386 AYKLFLKIKHAR 397
A ++F KI+ ++
Sbjct: 492 ALEIFGKIEKSK 503
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 162/381 (42%), Gaps = 2/381 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D Y +I+ L + + +M + G +AD++ + ++ F AG ++
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
++ + ++ + +VL+ + + A + M + +A N TYN++ G+ K
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
R E +++ M + G PD TF + + G +A R+D+ E+F M R +T Y
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N ++ F + K + EM+S P++ +Y ++ L ++ AL++F ++ +
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ G I +C+ A ++ G + AY I++ L +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
++ +M E G++ D Y +I A ++EE GF P+ + K++
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTVKMVI 620
Query: 376 KLLDSNNAERAYKLFLKIKHA 396
+L S ++++ L A
Sbjct: 621 NMLSSGELDKSFLDMLSTTRA 641
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 97/254 (38%), Gaps = 35/254 (13%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAM----------------------------IFNF- 202
+ D+A ++F M + P +N + I+
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 203 ISVNDFDECMKY------YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
I +N F C K +++ EP+ + ++ L +V +AL++ D M+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P T+ + LC G A+V+ + +G + Y +L + K G+
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ + +M+E D Y II GLC G L+NA + E KGF + Y+ LI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 377 LLDSNNAERAYKLF 390
++ + KL
Sbjct: 308 FCNAGRWDDGAKLL 321
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 171/376 (45%), Gaps = 13/376 (3%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF WA + D +Y ++ L + + F M+ VL +M G+ + +I + +F
Sbjct: 180 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 238
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSV-FNSMKGKVAFNV 122
A KA+ +F + + E +N LL L R+ +G + V F+ +K + N+
Sbjct: 239 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNM 297
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY + GW + E R+ +M G+ PD V LEGL R+ + +A ++F
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
MK + P+ Y MI +F + + ++Y+++M+ + +P+ YT +IT ++K
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ ++ EM G P T IK + + P IY K ++ S+ + +
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 303 LL-----MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
++ R ++G+ +W+EM + G D Y +I GL + G+ A +EE
Sbjct: 478 IMKSYFVARNYEMGRA-----VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 532
Query: 358 ALHKGFCPSRLVYSKL 373
L KG + Y+K
Sbjct: 533 MLDKGMKTPLIDYNKF 548
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 138/350 (39%), Gaps = 9/350 (2%)
Query: 37 MMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSK-AIQVFGNLNE-LGMNRDTEALNVL 94
M VL +M+++ L ++V+ R H K A + F E G D+ N +
Sbjct: 147 MEAVLDEMKLD------LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSM 200
Query: 95 LKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
+ L + SV M K + T+ ++ + + + M+
Sbjct: 201 MSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFK 260
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
T L+ LGRA EA +F +KER P+ Y ++ + V + E +
Sbjct: 261 IGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARI 319
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+N+M+ + +P++ + ++ LLR K DA+++F M G P + T I+ C
Sbjct: 320 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 379
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
A+ + SG Y L+ K T+ + +EMQE G+ D +
Sbjct: 380 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 439
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
Y +I + N E+ + + + PS ++ ++ + N E
Sbjct: 440 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y V++ R + + DM +G++ D++ +++++ +R+ S AI++F +
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G + + ++++ C++S + A F+ M + + A Y + G+ +
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ + ++KEM+ G PD T+ ++ + + ++ M + +P +N +
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ ++ +++ ++EM+ P+ ++YT +I L+ K +A + +EML G+
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
P F G P + ++A+ SG
Sbjct: 539 KTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 174/395 (44%), Gaps = 2/395 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P ++ +Y ++K + + + M +LR M ++ D + SI++D
Sbjct: 197 VLLIDRMVETGFQPNEV-TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
+ G + A +F + G D L++ C + + M K K+
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V ++A+ + K G+ E E + KEM G++PD T+ ++G + ++D+A +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + C P+ +N +I + N D+ ++ + +M + TY +I
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ A ++F EM+ V P + + LC G P AL I++K +S + + Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
I++ + K +++ + G DV+ Y +I GLC G L A L+ +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
G P+ Y+ LI L +A ++ KL +IK
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 160/351 (45%), Gaps = 1/351 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G E D + S +++ G VS+A+++ + E+G LN L+ LC V A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 108 SSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ + M + N TY V K G+ ++++ME + D + + ++G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L + G +D AF +F M+ + + D +Y +I F +D+ K +M+ P+
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ ++ +I ++ K+ +A ++ EM++ G+ P T T T I C A +
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
GC ++ + IL+ K L ++ +M G +D Y +I G C +G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+LE A + +E + + P + Y L++ L D+ E+A ++F KI+ ++
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%)
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+++ + + K+ME G+A + T + + R ++ AF + + +PDT ++
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I E ++ + M+ +P L T ++ L KV DA+ + D M+
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P T +K +C G A+ + +K + Y I++ L K G
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
N++ EM+ G+ +D+ +Y +I G C G+ ++ ++ + + + P + +S LI+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 377 LLDSNNAERAYKL 389
+ A +L
Sbjct: 327 FVKEGKLREAEEL 339
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 35/236 (14%)
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM--------------L 219
D+A ++F M +P ++ + +D + +M +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 220 SNDC---------------------EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
N C EP+ T++ +I L +V +AL++ D M+ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T+ + LC G A+++ + +G + Y +L + K G+ +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
+ +M+E D Y II GLC G L+NA + E KGF ++Y+ LI
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%)
Query: 209 DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCF 268
D+ + + EM + P L ++R+ + + R ++ L + +M G+ T++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
I C A K + G + L+ L G+ L + + M E G+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
+ +++GLC G++ +AVL+++ + GF P+ + Y ++ + S A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 389 LFLKIKHARSLENARNY 405
L K++ + +A Y
Sbjct: 234 LLRKMEERKIKLDAVKY 250
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 2/369 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ G F +L R G ++ + ++ + G V +A++VF +
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRF 138
+ + N+L+ LC + A + +SM+ F NV T N + K +
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+E + +EM+ PD TF ++GLG+ GR+D+A++V+ M + +C+ ++ VY ++
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I NF + ++ K Y +M++ +C P+L + + + + MF+E+
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
+P + + I L G ++ + GC + AY I++ K GK
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
+ EEM+ G+ V Y +I GL I +L+ A ++ EEA K + ++YS LI+
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 379 DSNNAERAY 387
+ AY
Sbjct: 669 KVGRIDEAY 677
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 177/424 (41%), Gaps = 35/424 (8%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K +L DI Y V + + G+ ++ NG++ D + + ++ +A
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 69 VSKAIQVFGNL------------NELGMNRDTE-----------------------ALNV 93
+ +A+++F +L N + M + A N
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 94 LLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
+L CL + V A VF MK A N++TYN + + G+ + + M+ G+
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
P+ T + ++ L ++ ++DEA +F M + C PD + ++I V D+ K
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 214 YYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
Y +ML +DC N YT +I + D +++ +M+ P + ++ +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 274 SYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVE 333
G P ++++ + +Y IL+ L K G ++ M+E G D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 334 VYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
Y +I G C G++ A ++EE KGF P+ + Y +I+ L + + AY LF +
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 394 KHAR 397
K R
Sbjct: 649 KSKR 652
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 179/425 (42%), Gaps = 37/425 (8%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG------------- 48
+ +F W + LP SY ++ + R + F + +L +M V G
Sbjct: 82 IEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVL 141
Query: 49 --VEADLL--------------------MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNR 86
V+A+ L + ++ +F H + +F + ELG
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 87 DTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVM 145
L++ + V +A S+ + MK + ++ YN + K G+ + +
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 146 KEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISV 205
E+EA+G+ PD T+ + L +A R+DEA E+F +++ P T YN MI + S
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
FDE + P++ Y I+T L + KV +AL++F+EM + P T
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTY 380
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
I LC G A + +++G ++ I++ RL K K ++EEM
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
+ D + +I GL +G++++A V E+ L + +VY+ LI + E
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 386 AYKLF 390
+K++
Sbjct: 501 GHKIY 505
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 153/342 (44%), Gaps = 5/342 (1%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+ +DM DL +L+ +D +AG K +F + D + ++L+ L
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 100 ERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ +F SMK + + YN V G+ K G+ N+ ++++EM+ G P
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+G ++GL + R+DEA+ +F K + + + +Y+++I F V DE E+
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ PNL T+ ++ AL++ ++ +AL F M P T I LC
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
A V +++ ++ G S +Y ++ L+K G +++ + G D Y +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
I GL N + +A + EE +G +++K LLD+
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGL----PIHNKTCVVLLDT 841
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 175/394 (44%), Gaps = 3/394 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
++P I +Y I+ L + + V +M+ + +L +I++D RAG + A
Sbjct: 339 SIPSVI-AYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTA 396
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGG 131
++ ++ + G+ + +N+++ LC+ + A ++F M KV + T+ ++ G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
K GR ++ +V ++M + + ++ GR ++ +++ M +NC PD
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ N + + ++ + E+ + P+ +Y+ +I L++ + ++F
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
M G + T I C G A + ++ + G ++ Y ++ L+K+
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ ++EE + +V +Y +I G +G+++ A L++EE + KG P+ ++
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 372 KLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
L++ L+ + A F +K + N Y
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 42/319 (13%)
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
+YN++ ++ F+ +++++ EM G P T + G +A ++ E ++V M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
++ +P + Y +I F +VN D + + +M EP + +T +I + +V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 244 VDALQMFDEMLR-----------------------------------HGVLPPTGTITCF 268
AL + DEM +G+ P T T
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 269 IKHLCSYGPPFAALVIY---KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
I LC A+ ++ +K RR CT AY ++M GK ++ E +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTY---AYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G V Y I++ L +G+++ A+ V EE + K P+ Y+ LI+ L + +
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 386 AYKLFLKIKHARSLENARN 404
A++L ++ A N R
Sbjct: 396 AFELRDSMQKAGLFPNVRT 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/232 (18%), Positives = 95/232 (40%), Gaps = 1/232 (0%)
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTA-VYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
L R ++ A E F + R P YN+++ +FD + EM P
Sbjct: 72 LRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGP 131
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+++T ++ ++ K+ + + M + P T I + L ++
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
++ + G ++ + L+ +K G+ + L++ +EM+ +D+ +Y I +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
G+++ A E G P + Y+ +I L +N + A ++F ++ R
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 13/376 (3%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF WA + +Y ++ L + + F M+ VL +M G+ + +I + +F
Sbjct: 181 FFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAF 239
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSV-FNSMKGKVAFNV 122
A KA+ +F + + E +N LL L R+ +G + V F+ +K + N+
Sbjct: 240 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNM 298
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY + GW + E R+ +M G+ PD V LEGL R+ + +A ++F
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
MK + P+ Y MI +F + + ++Y+++M+ + +P+ YT +IT ++K
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ ++ EM G P T IK + + P IY K ++ S+ + +
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 303 LL-----MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
++ R ++G+ +W+EM + G D Y +I GL + G+ A +EE
Sbjct: 479 IMKSYFVARNYEMGRA-----VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEE 533
Query: 358 ALHKGFCPSRLVYSKL 373
L KG + Y+K
Sbjct: 534 MLDKGMKTPLIDYNKF 549
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 137/350 (39%), Gaps = 9/350 (2%)
Query: 37 MMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSK-AIQVFGNLNE-LGMNRDTEALNVL 94
M VL +M+++ L ++V+ R H K A + F E G + N +
Sbjct: 148 MEAVLDEMKLD------LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSM 201
Query: 95 LKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
+ L + SV M K + T+ ++ + + + M+
Sbjct: 202 MSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFK 261
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
T L+ LGRA EA +F +KER P+ Y ++ + V + E +
Sbjct: 262 IGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARI 320
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+N+M+ + +P++ + ++ LLR K DA+++F M G P + T I+ C
Sbjct: 321 WNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCK 380
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
A+ + SG Y L+ K T+ + +EMQE G+ D +
Sbjct: 381 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 440
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
Y +I + N E+ + + + PS ++ ++ + N E
Sbjct: 441 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y V++ R + + DM +G++ D++ +++++ +R+ S AI++F +
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G + + ++++ C++S + A F+ M + + A Y + G+ +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ + ++KEM+ G PD T+ ++ + + ++ M + +P +N +
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ ++ +++ ++EM+ P+ ++YT +I L+ K +A + +EML G+
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
P F G P + ++A+ SG
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 119/270 (44%), Gaps = 2/270 (0%)
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TYN++ +K +F + V++EM G+ TF + ++ A +A +F M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
K+ + N ++ + E +++ L PN+ TYT ++ R R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
++A +++++M+ HG+ P ++ L A+ ++ + G ++ +Y I+
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K T + +++M + G D VY +I+G +L+ +++E KG
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
P Y+ LI + + E +++ K+
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKM 464
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 157/323 (48%), Gaps = 1/323 (0%)
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
+ AI VF E+G+ + + N+++ +C+ + A + M+ K +V +Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
V G+ +FG +++ ++++ M+ G+ P+ +G + L R ++ EA E F M +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
PDT VY +I F D K++ EM S D P++ TYT II+ + +V+A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++F EM G+ P + T T I C G A ++ ++GC+ ++ Y L+ L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
K G + + EM + G ++ Y I++GLC G +E AV ++ E G
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 368 LVYSKLINKLLDSNNAERAYKLF 390
+ Y+ L++ S ++A ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEIL 549
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 161/378 (42%), Gaps = 7/378 (1%)
Query: 17 DIGSYRVIVK---ALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
++ SY +++ LGR K ++ + M + G D++ S VV+ + R G + K
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLL---MELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGW 132
++ + G+ ++ ++ LC + A F+ M + + + Y + G+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K G + EM + + PD T+ + G + G M EA ++F M + +PD+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
+ +I + + + +N M+ C PN+ TYT +I L + + A ++ E
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
M + G+ P T + LC G A+ + + +G Y L+ K G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
I +EM G + + +++G C G LE+ ++ L KG P+ ++
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 373 LINKLLDSNNAERAYKLF 390
L+ + NN + A ++
Sbjct: 602 LVKQYCIRNNLKAATAIY 619
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 165/414 (39%), Gaps = 36/414 (8%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ SY +V R + ++ M+ G++ + + ++ R +++A + F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ G+ DT L+ C+R + AAS F M + + +V TY A+ G+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G E ++ EM G+ PD TF + G +AG M +AF V M + C P+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+I D D + +EM +PN+ TY I+ L + + +A+++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL----------- 304
G+ T T T + C G A I K+ G ++ + +L+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 305 -------MRLSKLGKCGTLLN-----------------IWEEMQEGGYSSDVEVYEYIIS 340
M + T N I+++M G D + YE ++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 341 GLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G C ++ A + +E KGF S YS LI L A ++F +++
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 142/299 (47%), Gaps = 1/299 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+ +M G+E D + + +++ + +AGH+ A +V ++ + G + + L+ LC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 100 ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + +A+ + + M K + N+ TYN++ G K G E +++ E EA G+ D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ ++ ++G MD+A E+ M + QP +N ++ F ++ K N M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
L+ PN T+ ++ R + A ++ +M GV P T +K C
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A ++++ + G ++S+ Y +L+ K K ++++M+ G ++D E++++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 146/337 (43%), Gaps = 1/337 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V R+ GV ++ +IV+ + G + +A + + G D + + ++ C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 100 ERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + MK K + N Y ++ G + + E E EM G+ PD
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
+ ++G + G + A + F M R+ PD Y A+I F + D E K ++EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
EP+ T+T +I + + DA ++ + M++ G P T T I LC G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
+A + + + G ++ Y ++ L K G + + E + G ++D Y +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ C G+++ A +++E L KG P+ + ++ L+N
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 150/368 (40%), Gaps = 2/368 (0%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F+ ++ LP+ + Y ++ +R +M + D+L + ++ F
Sbjct: 339 FSEMIRQGILPDTV-VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVA 123
+ G + +A ++F + G+ D+ L+ C+ H+ A V N M + + NV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY + G K G + ++ EM G+ P+ T+ + GL ++G ++EA ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ DT Y ++ + + D+ + EML +P + T+ ++ +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
D ++ + ML G+ P T +K C AA IYK G + Y+ L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K +++EM+ G+S V Y +I G + A V ++ +G
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 364 CPSRLVYS 371
+ ++
Sbjct: 698 AADKEIFD 705
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 142/376 (37%), Gaps = 77/376 (20%)
Query: 32 KFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEAL 91
+FF ++ +D +D + + V G + +A +VF + G+ ++
Sbjct: 159 QFFDLLVYTYKDW-----GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 92 NVLLKCLCERSH-VGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
NV L L + + A VF + V +NVA+YN V + GR E ++ ME
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
G PD ++ + G R G +D+ +++ MK + +P++ +Y +
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS------------ 321
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
II L R K+ +A + F EM+R G+LP T T I
Sbjct: 322 -----------------------IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
C G AA SK + EM +
Sbjct: 359 DGFCKRGDIRAA--------------------------SKF---------FYEMHSRDIT 383
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
DV Y IISG C IG + A + E KG P + +++LIN + + + A+++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 390 FLKIKHARSLENARNY 405
+ A N Y
Sbjct: 444 HNHMIQAGCSPNVVTY 459
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 157/323 (48%), Gaps = 1/323 (0%)
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
+ AI VF E+G+ + + N+++ +C+ + A + M+ K +V +Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
V G+ +FG +++ ++++ M+ G+ P+ +G + L R ++ EA E F M +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
PDT VY +I F D K++ EM S D P++ TYT II+ + +V+A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++F EM G+ P + T T I C G A ++ ++GC+ ++ Y L+ L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
K G + + EM + G ++ Y I++GLC G +E AV ++ E G
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 368 LVYSKLINKLLDSNNAERAYKLF 390
+ Y+ L++ S ++A ++
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEIL 549
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 161/378 (42%), Gaps = 7/378 (1%)
Query: 17 DIGSYRVIVK---ALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
++ SY +++ LGR K ++ + M + G D++ S VV+ + R G + K
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLL---MELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGW 132
++ + G+ ++ ++ LC + A F+ M + + + Y + G+
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K G + EM + + PD T+ + G + G M EA ++F M + +PD+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
+ +I + + + +N M+ C PN+ TYT +I L + + A ++ E
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
M + G+ P T + LC G A+ + + +G Y L+ K G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
I +EM G + + +++G C G LE+ ++ L KG P+ ++
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 373 LINKLLDSNNAERAYKLF 390
L+ + NN + A ++
Sbjct: 602 LVKQYCIRNNLKAATAIY 619
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 165/414 (39%), Gaps = 36/414 (8%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ SY +V R + ++ M+ G++ + + ++ R +++A + F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ G+ DT L+ C+R + AAS F M + + +V TY A+ G+ +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G E ++ EM G+ PD TF + G +AG M +AF V M + C P+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+I D D + +EM +PN+ TY I+ L + + +A+++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL----------- 304
G+ T T T + C G A I K+ G ++ + +L+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 305 -------MRLSKLGKCGTLLN-----------------IWEEMQEGGYSSDVEVYEYIIS 340
M + T N I+++M G D + YE ++
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 341 GLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G C ++ A + +E KGF S YS LI L A ++F +++
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 142/299 (47%), Gaps = 1/299 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+ +M G+E D + + +++ + +AGH+ A +V ++ + G + + L+ LC
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 100 ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + +A+ + + M K + N+ TYN++ G K G E +++ E EA G+ D
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ ++ ++G MD+A E+ M + QP +N ++ F ++ K N M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
L+ PN T+ ++ R + A ++ +M GV P T +K C
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A ++++ + G ++S+ Y +L+ K K ++++M+ G ++D E++++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDF 706
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 146/337 (43%), Gaps = 1/337 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V R+ GV ++ +IV+ + G + +A + + G D + + ++ C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 100 ERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + MK K + N Y ++ G + + E E EM G+ PD
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
+ ++G + G + A + F M R+ PD Y A+I F + D E K ++EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
EP+ T+T +I + + DA ++ + M++ G P T T I LC G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
+A + + + G ++ Y ++ L K G + + E + G ++D Y +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ C G+++ A +++E L KG P+ + ++ L+N
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 150/368 (40%), Gaps = 2/368 (0%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F+ ++ LP+ + Y ++ +R +M + D+L + ++ F
Sbjct: 339 FSEMIRQGILPDTV-VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVA 123
+ G + +A ++F + G+ D+ L+ C+ H+ A V N M + + NV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY + G K G + ++ EM G+ P+ T+ + GL ++G ++EA ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ DT Y ++ + + D+ + EML +P + T+ ++ +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
D ++ + ML G+ P T +K C AA IYK G + Y+ L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K +++EM+ G+S V Y +I G + A V ++ +G
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 364 CPSRLVYS 371
+ ++
Sbjct: 698 AADKEIFD 705
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 142/376 (37%), Gaps = 77/376 (20%)
Query: 32 KFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEAL 91
+FF ++ +D +D + + V G + +A +VF + G+ ++
Sbjct: 159 QFFDLLVYTYKDW-----GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 92 NVLLKCLCERSH-VGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
NV L L + + A VF + V +NVA+YN V + GR E ++ ME
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
G PD ++ + G R G +D+ +++ MK + +P++ +Y +
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS------------ 321
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
II L R K+ +A + F EM+R G+LP T T I
Sbjct: 322 -----------------------IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
C G AA SK + EM +
Sbjct: 359 DGFCKRGDIRAA--------------------------SKF---------FYEMHSRDIT 383
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
DV Y IISG C IG + A + E KG P + +++LIN + + + A+++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 390 FLKIKHARSLENARNY 405
+ A N Y
Sbjct: 444 HNHMIQAGCSPNVVTY 459
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 169/373 (45%), Gaps = 3/373 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ +V L + S + ++ M V G + DL+ V++ + G A+ +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + + D N ++ LC+ H+ A +FN M+ K + +V TYN + +
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM-KERNCQPDTAV 194
GR+++ R++ +M + PD F ++ + G++ EA +++ M K ++C PD
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
YN +I F +E M+ + EM N TYT +I + R +A +F +M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
GV P T + LC+ G ALV+++ ++ + + Y ++ L K GK
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
+++ + G +V Y ++SG C G E A + E G P+ Y+ LI
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 375 N-KLLDSNNAERA 386
+L D + A A
Sbjct: 539 RARLRDGDEAASA 551
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 167/391 (42%), Gaps = 3/391 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F VK P I + ++ A+ + F ++ + M+ G+ +L SI ++
Sbjct: 60 IGLFGDMVKSRPFPS-IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
F R +S A+ + G + +LG LN LL C + + A ++ + M +
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ T+ + G + + +E +++ M G PD T+G + GL + G D A +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M++ + D +YN +I D+ +N+M + +P++ TY +I+ L
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG-CTISMEA 299
+ DA ++ +ML + P I G A +Y + +S C + A
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ K + + ++ EM + G + Y +I G +NA +V ++ +
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G P + Y+ L++ L ++ N E A +F
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 156/376 (41%), Gaps = 38/376 (10%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++ L +R + +L M +EAD+++ + ++D + H+ A +F
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ G+ D N L+ CLC AS + + M K + ++ +NA+ + K
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 136 GRFNEIERVMKEM-EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G+ E E++ EM ++ PD + ++G + R++E EVF M +R +T
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPN---------------------------- 226
Y +I F D D + +M+S+ P+
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 227 -----LD--TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
LD TYT +I AL + KV D +F + GV P T T + C G
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 280 AALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
A ++ + + G + Y L+ + G + +EM+ G++ D + ++
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LV 572
Query: 340 SGLCNIGQLENAVLVM 355
+ + + G+L+ + L M
Sbjct: 573 TNMLHDGRLDKSFLDM 588
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 128/293 (43%), Gaps = 4/293 (1%)
Query: 107 ASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A +F M F ++ ++ + +K +F+ + + ++M+ G++ + T+ +F+
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
R ++ A + M + P N+++ F N E + ++M+ +P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ T+T ++ L + K +A+ + + M+ G P T I LC G P AL +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
K + + Y ++ L K +++ +M+ G DV Y +IS LCN
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNN---AERAYKLFLKIKH 395
G+ +A ++ + L K P + ++ LI+ + AE+ Y +K KH
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 95/223 (42%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
++D+A +F M + P ++ ++ +N FD + +M + NL TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
I RR ++ AL + +M++ G P T+ + C A+ + +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G + L+ L + K + + E M G D+ Y +I+GLC G+ + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+ ++ + ++Y+ +I+ L + + A+ LF K++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 181/416 (43%), Gaps = 43/416 (10%)
Query: 17 DIGSYRVIVKALGRRK-FFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQV 75
D+ +Y VI++ + R + FF V +M +L I++D + G S A ++
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFNVATYNAVAGGWS 133
F ++ G++ + +L+ LC+R A +F M+ G +VA +NA+ G+
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA-HNALLDGFC 279
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
K GR E +++ E DG + ++GL RA R +AFE++ +M ++N +PD
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII 339
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+Y +I ++ +K + M S P+ Y +I AL R + + + EM
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL--------- 304
P T T I +C G A I+ + +SGC+ S+ + L+
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 305 -------------------MRLSKLG--------KCGTLLNIWEEMQ---EGGYSSDVEV 334
+RLS G + G++L + ++ + G S D+
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
Y +I+G C G ++ A+ ++ KG P + Y+ LIN L E A+KLF
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 147/359 (40%), Gaps = 37/359 (10%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
L +++ GV D +++ ++ + G KA++ FG + E D NV+L+ +
Sbjct: 114 TLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM 173
Query: 100 -ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
E A +V+N M K + N+ T+ + G K GR ++ +++ +M G++P+
Sbjct: 174 REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
T+ + + GL + G D+A ++F M+ PD+ +NA++ F + E +
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
+ L Y+ +I L R R+ A +++ ML+ + P
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP----------------- 336
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
+ Y IL+ LSK GK L + M G S D Y
Sbjct: 337 ------------------DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+I LC G LE + E P ++ LI + + A ++F +I+ +
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKS 437
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 117/296 (39%), Gaps = 36/296 (12%)
Query: 143 RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNF 202
+ ++E+++ GV+ D F V + + G ++A E F MKE +C+PD YN ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 203 ISVNDFDE-CMKYYNEMLSNDCEPNL---------------------------------- 227
+ F YNEML +C PNL
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 228 -DTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
TYT +I+ L +R DA ++F EM G P + + C G A + +
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ G + + Y L+ L + + ++ M + D+ +Y +I GL G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
++E+A+ ++ KG P Y+ +I L E L L++ S +A
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 161/435 (37%), Gaps = 76/435 (17%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y ++ L R + ++ + +M ++ D+++ +I++ +AG + A+++ ++
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFN 139
G++ DT N ++K LC R + S+ M +F + T+ + + G
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK--------------- 184
E E + E+E G +P TF ++GL ++G + EA + M+
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 185 ------------------------ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS 220
+ PD YN +I F D D +K N +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 221 NDCEPNLDTYTRIITALLRRRKVVDALQMF--DEMLRHGV-------------------- 258
P+ TY +I L R + +A ++F + RH
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAF 605
Query: 259 ---LPPTGTITCF-------IKHLCSYGPPFAAL--VIYKKARRSGCTISMEAYKILLMR 306
+ I+C I+ G AL +I R+ T+ Y I L+
Sbjct: 606 NLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLG--PYTIWLIG 663
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
L + G+ L ++ ++E +I GLC QL+ A+ V L F
Sbjct: 664 LCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLM 723
Query: 367 RLVYSKLINKLLDSN 381
V + L++ LL+S
Sbjct: 724 PRVCNYLLSSLLEST 738
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 166/370 (44%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ ++ +++ L + + + M+ N E DL S ++ AG+V KA VF
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
L+E + D N +L C + + ++ M+ K + N+ +YN + G + G
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENG 373
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+ +E + + M A G A D TT+G+F+ GL G +++A V ++ D Y
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++I +E EM + E N +I L+R ++ +A EM ++
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P + I LC G A K+ +G ++ Y ILL L + K
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
L +W + + G +DV ++ +I GLC++G+L++A+ VM H+ + + Y+ L+
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 377 LLDSNNAERA 386
++ RA
Sbjct: 614 FFKVGDSNRA 623
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 163/378 (43%), Gaps = 4/378 (1%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
F+ A +HP Y I++ L + + + ++ +R + D + V+ +
Sbjct: 28 ALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKT 87
Query: 63 FVRAGHVSKAIQVFGNLNEL-GMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAF 120
+ + +A+ VF + E+ G + N LL E S+F + VA
Sbjct: 88 YGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAP 147
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
N+ TYN + K F + + M +G PD ++ + L +AG++D+A E+F
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRIITALLR 239
M ER PD YN +I F+ D M+ ++ +L + PN+ T+ +I+ L +
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK 267
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+V D L++++ M ++ T + I LC G A ++ + +I +
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y +L + GK L +W M+ S ++ Y +I GL G+++ A ++
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 360 HKGFCPSRLVYSKLINKL 377
KG+ + Y I+ L
Sbjct: 387 AKGYAADKTTYGIFIHGL 404
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 145/373 (38%), Gaps = 34/373 (9%)
Query: 7 WAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
W + +I SY +++K L + R M G AD I +
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYN 126
G+V+KA+ V + G + D A ++ CLC++
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK------------------------ 443
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
R E ++KEM GV + + GL R R+ EA M +
Sbjct: 444 ----------RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKN 493
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
C+P YN +I F E + EML N +P+L TY+ ++ L R RK+ A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
L+++ + L+ G+ I LCS G A+ + CT ++ Y L+
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
K+G IW M + G D+ Y I+ GLC + A+ ++A + G P+
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Query: 367 RLVYSKLINKLLD 379
++ L+ +++
Sbjct: 674 VYTWNILVRAVVN 686
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 184/439 (41%), Gaps = 39/439 (8%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F +W K P D+ SY ++ L + + + +M GV D+ +I++D F
Sbjct: 171 FLDWMWKEGFKP-DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF 229
Query: 64 VR------------------------------------AGHVSKAIQVFGNLNELGMNRD 87
++ G V ++++ + + +D
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 88 TEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
+ L+ LC+ +V A SVFN + + K + +V TYN + GG+ + G+ E + +
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
ME + + ++ + ++GL G++DEA ++ M + D Y I
Sbjct: 350 IMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
++ + E+ S+ ++ Y II L +++++ +A + EM +HGV +
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 267 CFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEG 326
I L A ++ ++GC ++ +Y IL+ L K GK G +EM E
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 327 GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
G+ D++ Y ++ GLC +++ A+ + + L G ++++ LI+ L + A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 387 YKLFLKIKHARSLENARNY 405
+ ++H N Y
Sbjct: 589 MTVMANMEHRNCTANLVTY 607
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 110/295 (37%), Gaps = 71/295 (24%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y + + L + + +GV++++ +G D+ + ++D + + +A +
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
+++ G+ ++ N L+ L S +G AS M K V +YN + G K
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR-------------------------- 169
G+F E +KEM +G PD T+ + L GL R
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 170 ---------AGRMDEAFEVFCSMKERNC-------------------------------- 188
G++D+A V +M+ RNC
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 189 ---QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
QPD YN ++ M+++++ ++ P + T+ ++ A++ R
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 185/417 (44%), Gaps = 16/417 (3%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ FF W + + D ++ ++K LG + +L DM GV D M ++++
Sbjct: 134 LQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIE 193
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
S+ +AG V +++++F + +LG+ R ++ N L K + R A FN M + V
Sbjct: 194 SYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEP 253
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
TYN + G+ R R ++M+ G++PD TF + G R +MDEA ++F
Sbjct: 254 TRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLF 313
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
MK P Y MI +++V+ D+ ++ + EM S+ EPN TY+ ++ L
Sbjct: 314 VEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDA 373
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY---GPPFAALVIYKKARRSGCTISM 297
K+V+A + M+ + P +I F+K L S G AA + K
Sbjct: 374 GKMVEAKNILKNMMAKHIAPKDNSI--FLKLLVSQSKAGDMAAATEVLKAMATLNVPAEA 431
Query: 298 EAYKILLM---RLSKLGKCGTLLNIWEEMQ-----EGGYSSDVEVYEYIISGLCNIGQLE 349
Y +L+ + S + LL+ E + + + Y II LCN GQ
Sbjct: 432 GHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTA 491
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYW 406
A ++ + + +G + + LI N + +Y++ LKI R + N +
Sbjct: 492 KAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPDSSYEI-LKIMSRRGVPRESNAY 546
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 169/416 (40%), Gaps = 48/416 (11%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
I SY + K + RR + M GVE ++++ F + + A++ F
Sbjct: 220 IKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFE 279
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFG 136
++ G++ D N ++ C + A +F MKG K+ +V +Y + G+
Sbjct: 280 DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD 339
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP-DTAVY 195
R ++ R+ +EM + G+ P+ TT+ L GL AG+M EA + +M ++ P D +++
Sbjct: 340 RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 196 NAMIFNFISVNDF---DECMK------------YYNEMLSNDCEPN--------LDT--- 229
++ + D E +K +Y ++ N C+ + LDT
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIE 459
Query: 230 -----------------YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
Y II L + A +F ++++ GV + I+
Sbjct: 460 KEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGH 518
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
G P ++ I K R G AY++L+ G+ G + M E G+ D
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDS 578
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHK--GFCPSRLVYSKLINKLLDSNNAERA 386
++ +I L G+++ A VM + K G + + +K++ LL + E A
Sbjct: 579 SLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEA 634
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 151/367 (41%), Gaps = 15/367 (4%)
Query: 6 NWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVR 65
N KH A P+D + ++ + + + VL+ M V A+ +++++ +
Sbjct: 385 NMMAKHIA-PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 66 AGHVSKAIQVFGNLNELGM---NRDT-----EALNVLLKCLCERSHVGAASSVFNSMKGK 117
A ++AI++ L E + ++DT A N +++ LC A +F + +
Sbjct: 444 ASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKR 503
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ N + G +K G + ++K M GV + + + ++ G +A
Sbjct: 504 GVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAK 563
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC--EPNLDTYTRIIT 235
SM E PD++++ ++I + + M+ + E N+D +I+
Sbjct: 564 TALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILE 623
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTI 295
ALL R V +AL D + ++G T + + L G AAL + ++
Sbjct: 624 ALLMRGHVEEALGRIDLLNQNG---HTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSL 680
Query: 296 SMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
+Y +L L GK ++ ++ E G S+D + + +I L G + A V+
Sbjct: 681 EFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQAD-VL 739
Query: 356 EEALHKG 362
+ KG
Sbjct: 740 SRMIKKG 746
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 158/346 (45%), Gaps = 1/346 (0%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
+ D+ + +++ F + + A +V + + DT N+++ LC R + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 110 VFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
V N + V TY + G +E ++M EM + G+ PD T+ + G+
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
+ G +D AFE+ +++ + C+PD YN ++ ++ ++E K +M S C+PN+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
TY+ +IT L R K+ +A+ + M G+ P + I C G A+ +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
GC + Y +L L K GK L I+ ++ E G S + Y + S L + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
A+ ++ E + G P + Y+ +I+ L + A++L + ++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 159/354 (44%), Gaps = 1/354 (0%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D ML I S R+G+ +++ + + G N D L+K ++ A V
Sbjct: 89 DTQMLKIFHRS-CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 112 NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
++ +V YNA+ G+ K R ++ RV+ M + +PD T+ + + L G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
++D A +V + NCQP Y +I + DE +K +EMLS +P++ TY
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
II + + V A +M + G P + ++ L + G + K
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
C ++ Y IL+ L + GK +N+ + M+E G + D Y+ +I+ C G+L+ A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ +E + G P + Y+ ++ L + A++A ++F K+ N+ +Y
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 165/359 (45%), Gaps = 1/359 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y +++ +L R + VL + + + ++ +I++++ + G V +A+++
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ G+ D N +++ +C+ V A + +++ K +V +YN +
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G++ E E++M +M ++ P+ T+ + + L R G+++EA + MKE+ PD Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+ +I F D +++ M+S+ C P++ Y ++ L + K AL++F ++
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P + + L S G AL + + +G Y ++ L + G
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
+ +M+ + V Y ++ G C ++E+A+ V+E + G P+ Y+ LI
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 136/324 (41%), Gaps = 1/324 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++++A + ++ +M G++ D+ + ++ + G V +A ++ NL
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G D + N+LL+ L + + M K NV TY+ + + G+
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E ++K M+ G+ PD ++ + R GR+D A E +M C PD YN +
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ D+ ++ + ++ C PN +Y + +AL + AL M EM+ +G+
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T I LC G A + R S+ Y I+L+ K + +N
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 319 IWEEMQEGGYSSDVEVYEYIISGL 342
+ E M G + Y +I G+
Sbjct: 530 VLESMVGNGCRPNETTYTVLIEGI 553
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 140/356 (39%), Gaps = 1/356 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++ + VL MR D + +I++ S G + A++V
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
L +L++ V A + + M + + ++ TYN + G K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G + +++ +E G PD ++ + L L G+ +E ++ M C P+ Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+ +I +E M M P+ +Y +I A R ++ A++ + M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G LP + LC G AL I+ K GC+ + +Y + L G
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
L++ EM G D Y +IS LC G ++ A ++ + F PS + Y+
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 5/242 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y +++ L R M +L+ M+ G+ D ++ +F R G + AI+
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV--AFNVATYNAV-AGGWS 133
+ G D N +L LC+ A +F + G+V + N ++YN + + WS
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWS 450
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
+ + ++ EM ++G+ PD T+ + L R G +DEAFE+ M+ P
Sbjct: 451 SGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
YN ++ F + ++ + M+ N C PN TYT +I + +A+++ +++
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 254 LR 255
+R
Sbjct: 570 VR 571
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 109/255 (42%), Gaps = 1/255 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ SY ++++AL + + ++ M + +++ SI++ + R G + +A+ +
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ E G+ D + + L+ C + A +M ++ YN V K
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ ++ + ++ G +P+ +++ L +G A + M PD Y
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N+MI DE + +M S + P++ TY ++ + ++ DA+ + + M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 256 HGVLPPTGTITCFIK 270
+G P T T I+
Sbjct: 537 NGCRPNETTYTVLIE 551
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 171/376 (45%), Gaps = 6/376 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
S+ +++KAL + +F + V R M D ++D + + +A+ + +
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGR 137
G + NVL+ LC++ + + + ++M KG V N TYN + G G+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVP-NEVTYNTLIHGLCLKGK 307
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
++ +++ M + P+ T+G + GL + R +A + SM+ER + +Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
+I +E M + +M C+PN+ Y+ ++ L R K +A ++ + M+ G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
LP T + +K G A+ ++K+ ++GC+ + Y +L+ L +G+ +
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL---HKGFCPSRLVYSKLI 374
+W +M G D Y II GLC IG ++ A+ + E L P + Y+ L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 375 NKLLDSNNAERAYKLF 390
+ L + RA L
Sbjct: 548 DGLCMQKDISRAVDLL 563
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 148/338 (43%), Gaps = 1/338 (0%)
Query: 54 LMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS 113
L ++V+ + + V +AI+VF + E D L+ LC+ + A + +
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 114 MKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGR 172
M+ + + + YN + G K G + +++ M G P+ T+ + GL G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+D+A + M C P+ Y +I + + ++ + M N Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
+I+ L + K +A+ ++ +M G P + + LC G P A I + SG
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
C + Y L+ K G C + +W+EM + G S + Y +I GLC +G+++ A+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+V + L G P + YS +I L + + A KL+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%)
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
++P+ +F + ++ L + +D A EVF M ER C PD Y ++ DE +
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
+EM S C P+ Y +I L ++ + ++ D M G +P T I L
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
C G A+ + ++ S C + Y L+ L K + + + M+E GY +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
+Y +ISGL G+ E A+ + + KG P+ +VYS L++ L A ++ +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 393 IKHARSLENARNY 405
+ + L NA Y
Sbjct: 423 MIASGCLPNAYTY 435
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 28/299 (9%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y V++ L + M + R M G + ++++ S++VD R G ++A ++ +
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFN 139
G + + L+K + A V+ M K + N Y+ + G GR
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM---KERNCQPDTAVYN 196
E V +M G+ PD + ++GL G MD A +++ M +E QPD YN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT---------------------YTRIIT 235
++ D + N ML C+P++ T ++
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
LL+R++V A + + ML + P T T ++ +C AA+ K R+ CT
Sbjct: 605 RLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI---DKCWRNLCT 660
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 125/280 (44%), Gaps = 5/280 (1%)
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
G +T +++ ++ G F+ +E+++ + + +F V G+A D+
Sbjct: 71 GSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDK 130
Query: 176 AFEVFCSM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYY----NEMLSNDCEPNLDTY 230
A ++F M E C+ +N+++ I+ + +++Y N ++ + PN ++
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSF 190
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
+I AL + R V A+++F M LP T + LC A+++ + +
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
GC+ S Y +L+ L K G + + + M G + Y +I GLC G+L+
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 351 AVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
AV ++E + P+ + Y LIN L+ A A +L
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLL 350
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 156/337 (46%), Gaps = 1/337 (0%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
+++ + R +V + ++ + + + ++K +C + A ++ M
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
NV Y + + + RF + RV+KEM+ G+APD + + GL +A RMDEA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
M E +P+ Y A I +I ++F KY EM PN T +I
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++ KV++A + M+ G+L T T + L A I+++ R G +
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+Y +L+ SKLG +I++EM E G + +V +Y ++ G C G++E A +++E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
KG P+ + Y +I+ S + A++LF ++K
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 171/422 (40%), Gaps = 43/422 (10%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + DI Y ++ L + K L +M NG++ + + ++ A
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
+ A + + E G+ + L+ C++ V A S + SM + + + TY
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ G K + ++ E + +EM G+APD ++GV + G + G M +A +F M E
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
P+ +YN ++ F + ++ + +EM PN TY II + + +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++FDEM G++P + T + C A+ I+ ++ GC S + L+ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWV 776
Query: 308 SKLGKCGTLLNIWEEMQEG-----GYSSDVEVYEYIISGLCNIG----------QLENAV 352
K GK + + +G G +DV Y +I LC G Q++NA
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 353 L-------------------------VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAY 387
L V +EA+ G P ++YS +IN L +A
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895
Query: 388 KL 389
L
Sbjct: 896 VL 897
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 158/376 (42%), Gaps = 11/376 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y V++ L + + R+MR G+ D+ ++++ F + G++ KA +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ E G+ + N+LL C + A + + M K + N TY + G+ K
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G E R+ EM+ G+ PD + ++G R ++ A +F + K + C TA +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCE----PNLDTYTRIITALLRRRKVVDALQMFD 251
NA+I + + N ++ + PN TY +I L + + A ++F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+M ++P T T + G ++ +A +G Y +++ K G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 312 KCGTLLNIWEEM-----QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
L + ++M + G + ++SG +G++E A VME + + P
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 367 RLVYSKLINKLLDSNN 382
+LIN+ S+N
Sbjct: 950 SATVIELINESCISSN 965
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 150/360 (41%), Gaps = 39/360 (10%)
Query: 41 LRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCE 100
+++MR GV + ++ + +++ + + G V +A + ++ + G+ D + VL+ L +
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 101 RSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
V A +F M+GK +A +V +Y + G+SK G + + EM +G+ P+
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
+ + L G R+G +++A E+ M + P+ Y +I + D E + ++EM
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMF-------------------------DEML 254
P+ YT ++ R V A+ +F L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 255 RHGVL-------------PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
+ VL P T I +LC G AA ++ + + + ++ Y
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
LL K+G+ + +++E G D +Y II+ G A++++++ K
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 169/426 (39%), Gaps = 41/426 (9%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y +VK + ++++M +G ++++ + ++ +F++ A++V +
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
E G+ D N L+ L + + A S M + + N TY A G+ + F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 139 NEIERVMKEMEADGVAP-----------------------------------DCTTFGVF 163
++ +KEM GV P D T+ V
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 164 LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
+ GL + ++D+A E+F M+ + PD Y +I F + + + ++EM+
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALV 283
PN+ Y ++ R ++ A ++ DEM G+ P T I C G A
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 284 IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC 343
++ + + G Y L+ +L + I+ ++G SS + +I+ +
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP-FNALINWVF 777
Query: 344 NIGQLENAVLVMEEALHKGF----CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSL 399
G+ E V+ + F P+ + Y+ +I+ L N E A +LF ++++A +
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 400 ENARNY 405
Y
Sbjct: 838 PTVITY 843
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 119/278 (42%)
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY+ + G K R + + ++ EM++ GV+ D T+ + ++GL + D A + M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+Y+ I ++ ++ M+++ P Y +I R + V
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
++ EM + ++ T +K +CS G A I K+ SGC ++ Y L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ + + G + + +EM+E G + D+ Y +I GL +++ A + E + G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLEN 401
P+ Y I+ ++++ A K +++ L N
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 105/289 (36%), Gaps = 29/289 (10%)
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
VA WS R ++ E G + D FG+ +G G ++EA VF S
Sbjct: 130 VAEVWSSIVRCSQ--------EFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLE 181
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV---- 243
P + ++ + N D Y M+ + ++ TY +I A R V
Sbjct: 182 LVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGK 241
Query: 244 ----------------VD-ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
VD AL++ + M+ G++P T I LC A +
Sbjct: 242 DVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLV 301
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ G ++ Y +L+ L K + EM G + +Y+ I + G
Sbjct: 302 EMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEG 361
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
+E A + + + G P Y+ LI N + Y+L +++K
Sbjct: 362 VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 2/330 (0%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNL-NELGMNRDTEALNVLLKCLCERSHVGAAS 108
+ ++++ + ++ FV G + A V ++ G+ D N L+ + VG A
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 109 SVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGL 167
V + M+ K NV +Y + G+ K G+ +E V+ EM ADG+ P+ F +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 168 GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNL 227
+ R+ EA E+F M + C+PD +N++I V++ + +M+S N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 228 DTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK 287
TY +I A LRR ++ +A ++ +EM+ G T IK LC G A +++K
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 288 ARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQ 347
R G S + IL+ L + G + +EM G + D+ + +I+GLC G+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 348 LENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+E+ + + + +G P + ++ L++ L
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 3/293 (1%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ SY ++V + VL +M +G++ + + + ++ +F + + +A+++F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSK 134
+ G D N L+ LCE + A + M +G VA N TYN + + +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA-NTVTYNTLINAFLR 541
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G E +++ EM G D T+ ++GL RAG +D+A +F M P
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
N +I +E +++ EM+ P++ T+ +I L R ++ D L MF ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
G+ P T T + LC G + A ++ + G + + ILL +
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 167/437 (38%), Gaps = 36/437 (8%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG-VEADLLMLSIVVDS 62
F+W Y+V++ LG F + +L M+ G V + L +SI+ D
Sbjct: 97 LFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD- 155
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDT-EALNVLLKCLCE-RSHVGAASSVFNSMKGKVAF 120
+ +AG + ++ + + T ++ NV+L+ L H AA+ ++ + K+
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ T+ V + + ++++M G P+ + + L + R++EA ++
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M C PD +N +I + +E K N ML P+ TY ++ L +
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 241 RKVVDALQMF--------------------------------DEMLRHGVLPPTGTITCF 268
+V A +F D + +G++P T
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
I G AL + R GC ++ +Y IL+ KLGK N+ EM G
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
+ + +IS C ++ AV + E KG P ++ LI+ L + + + A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 389 LFLKIKHARSLENARNY 405
L + + N Y
Sbjct: 516 LLRDMISEGVVANTVTY 532
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 12/239 (5%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ ++ ++ L + +LRDM GV A+ + + ++++F+R G + +A ++
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSK 134
+ G D N L+K LC V A S+F M G N++ N + G +
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC-NILINGLCR 611
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G E KEM G PD TF + GL RAGR+++ +F ++ PDT
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 195 YNAMIFNFISVNDF--DECMKYYNEMLSNDCEPNLDTYTRIITAL-----LRRRKVVDA 246
+N ++ +++ F D C+ +E + + PN T++ ++ ++ L RR+ +A
Sbjct: 672 FNTLM-SWLCKGGFVYDACL-LLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNA 728
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 170/393 (43%), Gaps = 8/393 (2%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLML---SIVV 60
FF WA +Y +V LG+ + F M ++ +M N E+ L+ L S V+
Sbjct: 152 FFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNE-ESKLVTLDTMSKVM 210
Query: 61 DSFVRAGHVSKAIQVFGNLNE-LGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVA 119
++G +KA+ F + + G+ DT A+N L+ L + + + A VF + +
Sbjct: 211 RRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK 270
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+ T+N + G+ K +F++ +M M+ PD T+ F+E + G E+
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M+E C P+ Y ++ + E + Y +M + C P+ Y+ +I L +
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR---SGCTIS 296
+ DA ++F++M GV I + AL + K+ C+ +
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
+E Y LL K L + M + S DV Y +I GLC G++E A L E
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 357 EALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
EA+ KG P L+++L N AE K+
Sbjct: 511 EAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 126/274 (45%), Gaps = 4/274 (1%)
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT--TFGVFLEGLGRAGRMDEAFEVFC 181
TYNA+ K F+ + ++ EM + + T T + L ++G+ ++A + F
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 182 SM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M K + DT N+++ + N + + + ++ + +P+ T+ +I +
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF-DTIKPDARTFNILIHGFCKA 286
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
RK DA M D M P T T F++ C G + ++ R +GC ++ Y
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
I++ L K + L ++E+M+E G D + Y +I L G+ ++A + E+ +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+G LVY+ +I+ L + E A +L +++
Sbjct: 407 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 166/343 (48%), Gaps = 5/343 (1%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNV-LLKCLCERSHVGAASSVFNSMKGK 117
++ S + + A+ L G+ RD +++ V +++ C+ ++V A ++F
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 118 VAFN--VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
+ + TYN + GG + + V ++++ G PD T+ L+ G++G++DE
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRII 234
FE++ M C+ +T +N +I + + D+ + Y +++S+ D P TY +I
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 235 TALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
L + ++ +A Q+F+ ML +G P I G AA ++K+ + G
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 295 ISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA-VL 353
++ Y +L+ L +G+ L+ ++E++E G + DV Y II+GL +LE A VL
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
E +G P Y+ LI L + E A K++ +I+ A
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 182/420 (43%), Gaps = 36/420 (8%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+ D +Y I K+L + LR MR G + + ++ +++ ++A+
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGW 132
+V+ + G + + L+ L +R + + + M+ + NV T+
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+ G+ NE ++K M+ +G PD T+ V ++ L A ++D A EVF MK +PD
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSND---------------CE------------- 224
Y ++ F D D ++++EM + C+
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 225 -------PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
PNL TY +I LLR ++ DAL++F M GV P T FI + G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
+AL ++K + G ++ A L L+K G+ I+ +++ G D Y
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
++ +G+++ A+ ++ E + G P +V + LIN L ++ + A+K+F+++K +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 172/385 (44%), Gaps = 4/385 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F++ K +P D+ ++ ++V AL + F L MR G+ +L + ++
Sbjct: 350 FWSEMEKDGHVP-DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
+R + A+++FGN+ LG+ V + + +A F MK K +A N+
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
NA +K GR E +++ ++ G+ PD T+ + ++ + G +DEA ++
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M E C+PD V N++I + DE K + M +P + TY ++ L + K
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ +A+++F+ M++ G P T T LC AL + K GC + Y
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK- 361
++ L K G+ + + +M++ Y V + ++ G+ +E+A ++ L+
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT-LLPGVVKASLIEDAYKIITNFLYNC 707
Query: 362 GFCPSRLVYSKLINKLLDSNNAERA 386
P+ L + LI +L + A
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNA 732
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 175/410 (42%), Gaps = 36/410 (8%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ LG+R+ +MG+L++M G++ ++ +I + RAG +++A ++ +
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRF 138
++ G D VL+ LC + A VF MK G+ + TY + +S
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG--------------------------- 171
+ +++ EME DG PD TF + ++ L +AG
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 172 --------RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
R+D+A E+F +M+ +P Y I + D ++ + +M +
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALV 283
PN+ + +L + + +A Q+F + G++P + T +K G A+
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 284 IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC 343
+ + +GC + L+ L K + ++ M+E V Y +++GL
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 344 NIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
G+++ A+ + E + KG P+ + ++ L + L ++ A K+ K+
Sbjct: 585 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 151/339 (44%), Gaps = 3/339 (0%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
T F K + + +Y +++ L V ++ G D+ + ++D+
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN- 121
+ ++G + + +++ ++ +T N+++ L + +V A ++ + F+
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 122 -VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
TY + G SK GR E +++ + M G P+C + + + G G+AG D A +F
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + +PD Y+ ++ V DE + Y+ E+ + P++ Y II L +
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Query: 241 RKVVDALQMFDEM-LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++ +AL +F+EM G+ P T I +L G A IY + +R+G ++
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
+ L+ S GK +++ M GG+S + YE +
Sbjct: 1070 FNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 10/276 (3%)
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
+N V+G + F +F K++ GV P T+ + + GL A ++ A +VF +K
Sbjct: 762 HNNVSGARTLFEKFT------KDL---GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
C PD A YN ++ + DE + Y EM +++CE N T+ +I+ L++ V
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 245 DALQMFDEMLRHGVLPPTG-TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
DAL ++ +++ PT T I L G + A +++ GC + Y IL
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K G+ +++ M + G D++ Y ++ LC +G+++ + +E G
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSL 399
P + Y+ +IN L S+ E A LF ++K +R +
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 132/318 (41%), Gaps = 4/318 (1%)
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV-AFNVATYNAVAGGW 132
V GNLN + TE N +L+ L + + VF+ M+ ++ + TY +
Sbjct: 107 SVAGNLN---LVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSL 163
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
S G + +++M G + ++ + L ++ EA EV+ M +P
Sbjct: 164 SVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSL 223
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
Y++++ D D M EM + +PN+ T+T I L R K+ +A ++
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
M G P T T I LC+ A +++K + Y LL R S
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
++ W EM++ G+ DV + ++ LC G A ++ +G P+ Y+
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 373 LINKLLDSNNAERAYKLF 390
LI LL + + A +LF
Sbjct: 404 LICGLLRVHRLDDALELF 421
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 168/374 (44%), Gaps = 13/374 (3%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
+ SY + ++ L R F VL+ M G+ + +I++D + G +S A + G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFG 136
+ G+ D LL C V AA S+ M + N T N + K G
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
R +E E ++++M G D T + ++GL +G +D+A E+ M+ +A
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG----SAALG 501
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+ ++I + D + ++ N+C P+L TY+ ++ L + + +A +F EM+
Sbjct: 502 NLGNSYIGLVD--------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
+ P + FI H C G +A + K + GC S+E Y L++ L + +
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI 613
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ +EM+E G S ++ Y I LC ++E+A +++E + K P+ + LI
Sbjct: 614 HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Query: 377 LLDSNNAERAYKLF 390
+ + A ++F
Sbjct: 674 FCKVPDFDMAQEVF 687
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 184/457 (40%), Gaps = 66/457 (14%)
Query: 3 TFFNWAVKHPALPEDIGS---YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIV 59
F + + PE+ S Y +++++ + + F+ + +DM + G+ +++
Sbjct: 94 AFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLL 153
Query: 60 VDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KV 118
+ + + V A ++F + E G + +L++ C+ + N+M+ V
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
N YN + + + GR ++ E+++++M +G+ PD TF + L + G++ +A
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 179 VFCSMKERN----CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
+F M+ +P++ YN M+ F V ++ + + ND +L +Y +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 235 TALLRRRKVVDA----LQMFDE-------------------------------MLRHGVL 259
L+R K ++A QM D+ M R+GV
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
P T C + CS G AA + ++ R+ C + ILL L K+G+ +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV-----------------------LVME 356
+M E GY D I+ GLC G+L+ A+ LV +
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 357 EALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+ P + YS L+N L + A LF ++
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 25/348 (7%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L++M N + +I++ S + G +S+A ++ +NE G DT N+++ LC
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 100 ERSHVGAASSVFNSMK--GKVAF----------------------NVATYNAVAGGWSKF 135
+ A + M+ G A ++ TY+ + G K
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GRF E + + EM + + PD + +F+ + G++ AF V M+++ C Y
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N++I N E +EM PN+ TY I L KV DA + DEM++
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ P + I+ C P F + S C Y ++ L G+
Sbjct: 658 KNIAPNVFSFKYLIEAFCKV-PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLK 716
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ E + + G+ +Y+ ++ LC +LE A ++ + + +G+
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 151/351 (43%), Gaps = 7/351 (1%)
Query: 59 VVDSFVRAGHVSKAIQVFGNL-NELGMNRDTEAL-NVLLKCLCERSHVGAASSVFNSMK- 115
VV F ++ H+ KA F + + N+ + L N+LL+ + V S ++ M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL 140
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
+A T+N + + + EM G P+ TFG+ + G +AG D+
Sbjct: 141 CGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT 235
E+ +M+ P+ +YN ++ +F D+ K +M P++ T+ I+
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 236 ALLRRRKVVDALQMFDEMLRHGVL----PPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
AL + KV+DA ++F +M L P + T +K C G A +++ R +
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
S+++Y I L L + GK + ++M + G + Y ++ GLC +G L +A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
++ G CP + Y L++ + A L ++ L NA
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 122/276 (44%), Gaps = 3/276 (1%)
Query: 38 MGVLRDMRV-NGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLK 96
+G++ D + N DL+ S +++ +AG ++A +F + + D+ A N+ +
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 97 CLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
C++ + +A V M+ K ++ TYN++ G + EI +M EM+ G++P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
+ T+ ++ L ++++A + M ++N P+ + +I F V DFD + +
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY 275
+S C Y+ + LL +++ A ++ + +L G T ++ LC
Sbjct: 688 ETAVS-ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 276 GPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
A I K G A ++ L K+G
Sbjct: 747 DELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 38/435 (8%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
+ F + A HP LP + R+++ A+ + + ++ + R + + G+ DL + ++
Sbjct: 64 LTLFCDMAESHP-LPSIVDFSRLLI-AIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 61 DSFVRAGHVSKAIQVFGNLNELG-----------------MNRDTEAL------------ 91
D F R +S A+ G + +LG +NR EA+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 92 ------NVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERV 144
N ++ LCE+ V A V MK + +V TYN++ G + R+
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
+ +M G++PD TF ++ G+ G++ EA + + M +R+ P+ YN++I
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 205 VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
DE K N ++S PN TY +I + ++V D +++ M R GV T T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
+ C G AA + + G M + ILL L GK G L E++Q
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
+ + Y II GLC ++E+A + KG P + Y ++ L
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWR 481
Query: 385 RAYKLFLKIKHARSL 399
A++L+ K++ L
Sbjct: 482 EAHELYRKMQKEDGL 496
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 117/289 (40%), Gaps = 36/289 (12%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + D+ +Y ++ L + +L DM G+ D++ S ++D + + G
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK------VAFNV 122
+ +A + + + + +N + N L+ LC + A V N + K V +N
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 123 A------------------------------TYNAVAGGWSKFGRFNEIERVMKEMEADG 152
TYN + G+ + G+F+ E+V+ M + G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
V PD TF + L+GL G++ +A +++ YN +I + ++
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
+ + P++ TY ++ L R+R +A +++ +M + L P
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 99/273 (36%), Gaps = 35/273 (12%)
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+K ++ + + + +E G++ D +F ++ R R+ A M + +P
Sbjct: 90 AKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSI 149
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
+ +++ F VN F E M ++++ EPN+ Y II +
Sbjct: 150 VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS---------------- 193
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
LC G AL + K ++ G + Y L+ RL G
Sbjct: 194 -------------------LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
G I +M G S DV + +I GQL A E + + P+ + Y+
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 373 LINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
LIN L + A K+ + NA Y
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY 327
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 166/383 (43%), Gaps = 40/383 (10%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G+ D++ +V+ + G A+ + + E + D + ++ LC+ H A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+F+ M K +A NV TYN + G+ FGR+++ +R++++M + PD TF +
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G++ EA ++ M R PDT YN+MI+ F N FD+ ++ M S P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 227 LDTYTRIITALLRRRKVVDALQM-----------------------------------FD 251
+ T+ II R ++V + +Q+ F
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
EM+ HGV P T T + C AL +++ + S + AY I++ + K
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
K +++ + G DV+ Y +ISG C + +A ++ + G P Y+
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 372 KLINKLLDSNNAERAYKLFLKIK 394
LI L + +++ +L +++
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMR 634
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 20/400 (5%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+P +I S+ +++K SF + + G + D++ + ++ +S+A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 74 QVFG---------------NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK- 117
+FG + E+G+ N L+ LC V A+++ N M GK
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ +V TY + G K G ++ +ME + PD + ++ L + G +A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
+F M E+ P+ YN MI F S + + + +M+ + P++ T+ +I+A
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++ K+ +A ++ DEML + P T T I C + A ++ + +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDV 432
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+ ++ + + + + E+ G ++ Y +I G C + L A + +E
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+ G CP + + L+ ++ E A +LF I+ ++
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 151/376 (40%), Gaps = 43/376 (11%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+ D+ Y I+ L + S + +M G+ ++ + ++D F G S A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGW 132
++ ++ E +N D N L+ + + A + + M + F + TYN++ G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K RF++ + + M +PD TF ++ RA R+DE ++ + R +T
Sbjct: 412 CKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN-------------------------- 226
YN +I F V++ + + EM+S+ P+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 227 -------LDT--YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
LDT Y II + + KV +A +F + HGV P T I C
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD---VEV 334
A V++ K + +G Y L+ K G+ + + EM+ G+S D +++
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 335 YEYIISGLCNIGQLEN 350
E II + + +EN
Sbjct: 648 AEEIICRVSDEEIIEN 663
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 135/349 (38%), Gaps = 53/349 (15%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
V+ FVR AI ++ + + + + N+L+KC C+ + + S F + K+
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KL 170
Query: 119 AF--NVATYNAVAGGWSKFGRFNE-------------IERV--MKEMEADGVAPDCTTFG 161
F +V T+N + G R +E +E V +M G+ P TF
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ GL GR+ EA + M + D Y ++ + D + ++M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
+P++ Y+ II L + DA +F EML G+ P T C I CS+G
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR---- 346
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ A+R L+R +M E + DV + +IS
Sbjct: 347 ---WSDAQR-------------LLR---------------DMIEREINPDVLTFNALISA 375
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+L A + +E LH+ P + Y+ +I N + A +F
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 25/239 (10%)
Query: 153 VAPDCT-TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
A DC GVF+ R R D A ++ M+ R + +N +I F +
Sbjct: 105 TAVDCNKVIGVFV----RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 212 MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
+ + ++ +P++ T+ ++ L ++ +AL +F M+ G L
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL------------ 208
Query: 272 LCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
A+ ++ + G T + + L+ L G+ + +M G D
Sbjct: 209 --------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 332 VEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
V Y I++G+C +G ++A+ ++ + P ++YS +I++L + A LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 166/383 (43%), Gaps = 40/383 (10%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G+ D++ +V+ + G A+ + + E + D + ++ LC+ H A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+F+ M K +A NV TYN + G+ FGR+++ +R++++M + PD TF +
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G++ EA ++ M R PDT YN+MI+ F N FD+ ++ M S P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 227 LDTYTRIITALLRRRKVVDALQM-----------------------------------FD 251
+ T+ II R ++V + +Q+ F
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
EM+ HGV P T T + C AL +++ + S + AY I++ + K
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
K +++ + G DV+ Y +ISG C + +A ++ + G P Y+
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 372 KLINKLLDSNNAERAYKLFLKIK 394
LI L + +++ +L +++
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMR 634
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 169/400 (42%), Gaps = 20/400 (5%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+P +I S+ +++K SF + + G + D++ + ++ +S+A+
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 74 QVFG---------------NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK- 117
+FG + E+G+ N L+ LC V A+++ N M GK
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ +V TY + G K G ++ +ME + PD + ++ L + G +A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
+F M E+ P+ YN MI F S + + + +M+ + P++ T+ +I+A
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++ K+ +A ++ DEML + P T T I C + A ++ + +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDV 432
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+ ++ + + + + E+ G ++ Y +I G C + L A + +E
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+ G CP + + L+ ++ E A +LF I+ ++
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 150/374 (40%), Gaps = 41/374 (10%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+ D+ Y I+ L + S + +M G+ ++ + ++D F G S A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGW 132
++ ++ E +N D N L+ + + A + + M + F + TYN++ G+
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K RF++ + + M +PD TF ++ RA R+DE ++ + R +T
Sbjct: 412 CKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN-------------------------- 226
YN +I F V++ + + EM+S+ P+
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 227 -------LDT--YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
LDT Y II + + KV +A +F + HGV P T I C
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A V++ K + +G Y L+ K G+ + + EM+ G+S D +
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK- 646
Query: 338 IISGLCNIGQLENA 351
+++ L G+L+ +
Sbjct: 647 MVADLITDGRLDKS 660
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 133/349 (38%), Gaps = 53/349 (15%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
V+ FVR AI ++ + + + + N+L+KC C+ + + S F + K+
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KL 170
Query: 119 AF--NVATYNAVAGGWSKFGRFNE-------------IERV--MKEMEADGVAPDCTTFG 161
F +V T+N + G R +E +E V +M G+ P TF
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ GL GR+ EA + M + D Y ++ + D + ++M
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
+P++ Y+ II L + DA +F EML G+ P T C I CS+G
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR---- 346
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ A+R + +M E + DV + +IS
Sbjct: 347 ---WSDAQR----------------------------LLRDMIEREINPDVLTFNALISA 375
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+L A + +E LH+ P + Y+ +I N + A +F
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 25/239 (10%)
Query: 153 VAPDCT-TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
A DC GVF+ R R D A ++ M+ R + +N +I F +
Sbjct: 105 TAVDCNKVIGVFV----RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 212 MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
+ + ++ +P++ T+ ++ L ++ +AL +F M+ G L
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE----------- 209
Query: 272 LCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
A+ ++ + G T + + L+ L G+ + +M G D
Sbjct: 210 ---------AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 332 VEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
V Y I++G+C +G ++A+ ++ + P ++YS +I++L + A LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 182/414 (43%), Gaps = 1/414 (0%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
+V + +++ + D+ S+ +++ R S + +L M G ++ L ++
Sbjct: 97 IVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 156
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VA 119
+ F + +A+ + +++ G + N ++ LC+ + A VF M+ K +
Sbjct: 157 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+ TYN + G S GR+ + R++++M + P+ F ++ + G + EA +
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+ M R+ P+ YN++I F + ++ M+S C P++ TY +IT +
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++V D +++F EM G++ T I C G A ++ + G + +
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y ILL L GK L + E++Q+ D+ Y II GLC +L+ A +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYWRSNGWHF 413
KG P + Y +I+ L A KL ++K + + R Y + H+
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 144/338 (42%), Gaps = 1/338 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G ++++ + V++ + ++ A++VF + + G+ D N L+ L A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 108 SSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ + M K K+ NV + A+ + K G E + KEM V P+ T+ + G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
G + +A +F M + C PD YN +I F ++ MK + EM +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
TY +I + K+ A ++F+ M+ GV P T + LC+ G ALV+ +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
++S + + Y I++ L + K ++ + G D Y +ISGLC G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
A + GF PS +Y + + S +AE
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 125/300 (41%), Gaps = 1/300 (0%)
Query: 107 ASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A S+F M + + ++ + V +K +F+ + + +ME G++ D +F + +
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
R R+ A + M + +P +++ F N F E + + M P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
N+ Y +I L + R + +AL++F M + G+ T I L + G A +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
+ + ++ + L+ K G N+++EM +V Y +I+G C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
G L +A + + + KG P + Y+ LI S E KLF ++ + + +A Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 12/218 (5%)
Query: 185 ERNCQPDTAV------------YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
ER P+T++ Y + N + FD+ + EML + P++ +TR
Sbjct: 25 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTR 84
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
++T + + K + ++ +M G+ + T I C AL + K + G
Sbjct: 85 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 144
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
S+ LL + + +++ + M G+ +V +Y +I+GLC L NA+
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
V KG + Y+ LI+ L +S A +L
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 173/377 (45%), Gaps = 3/377 (0%)
Query: 17 DIGSYRVIVKALGR-RKFFSFMMGVL-RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
D +Y +++++L R K S M+ L +++ + +E D+ +++ ++ F ++G SKA+Q
Sbjct: 231 DFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQ 290
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWS 133
+ G G++ T L ++ L + A ++F ++ + YNA+ G+
Sbjct: 291 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 350
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
K G + E ++ EME GV+PD T+ + ++ AGR + A V M+ + QP++
Sbjct: 351 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 410
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
V++ ++ F ++ + + EM S +P+ Y +I + + A+ FD M
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
L G+ P T I C +G A +++ R GC Y I++ +
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 530
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
+ + +M+ G +V + ++ G+ +A+ +EE G PS +Y+ L
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 374 INKLLDSNNAERAYKLF 390
IN +E+A F
Sbjct: 591 INAYAQRGLSEQAVNAF 607
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 143/343 (41%), Gaps = 7/343 (2%)
Query: 39 GVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
++ +M GV D S+++D++V AG A V + + ++ + LL
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
Query: 99 CERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVM---KEMEADGVA 154
+R V MK V + YN V FG+FN ++ M M ++G+
Sbjct: 420 RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI---DTFGKFNCLDHAMTTFDRMLSEGIE 476
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
PD T+ ++ + GR A E+F +M+ R C P YN MI ++ +D+ +
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+M S PN+ T+T ++ + + DA++ +EM G+ P + I
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
G A+ ++ G S+ A L+ + + + + M+E G DV
Sbjct: 597 RGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVT 656
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
Y ++ L + + + +V EE + G P R S L + L
Sbjct: 657 YTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 2/238 (0%)
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM--KYYN 216
T+ + R +++A + M++ Q D Y+ +I + N D M + Y
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
E+ + E ++ II + ALQ+ G+ T T+ I L G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
A ++++ R+SG AY LL K G ++ EM++ G S D Y
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+I N G+ E+A +V++E P+ V+S+L+ D ++ +++ ++K
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/385 (17%), Positives = 143/385 (37%), Gaps = 38/385 (9%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA--IQVFG 77
+Y ++ A R + ++ MR +G ++D + S+V+ S R+ + ++++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFG 136
+ + D + +N ++ + A + + ++ AT ++ + G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
R E E + +E+ G+ P + L+G + G + +A + M++R PD Y+
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I +++ ++ EM + D +PN ++R++ R + Q+ EM
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
GV P + Y +++ K
Sbjct: 439 GVKP-----------------------------------DRQFYNVVIDTFGKFNCLDHA 463
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ ++ M G D + +I C G+ A + E +G P Y+ +IN
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 377 LLDSNNAERAYKLFLKIKHARSLEN 401
D + +L K+K L N
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPN 548
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 125/300 (41%), Gaps = 9/300 (3%)
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMK---EMEADGVAPDCTTFGVFLEGLGRA 170
+ K TYNA+ G + R N+IE+ + +M DG D + + ++ L R+
Sbjct: 189 LSQKQTLTPLTYNALIGACA---RNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRS 245
Query: 171 GRMDEA--FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
++D ++ ++ + D + N +I F D + ++ +
Sbjct: 246 NKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTA 305
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
T II+AL + ++A +F+E+ + G+ P T +K GP A + +
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
+ G + Y +L+ G+ + + +EM+ G + V+ +++G + G+
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYWRS 408
+ V++E G P R Y+ +I+ N + A F ++ + +E R W +
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM-LSEGIEPDRVTWNT 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 104/278 (37%), Gaps = 71/278 (25%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL++M+ GV+ D ++V+D+F + + A+ F + G+ D N L+ C C
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 100 ERSHVGAASSVFNSMK-------------------------------GK-----VAFNVA 123
+ A +F +M+ GK + NV
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG------------ 171
T+ + + K GRFN+ ++EM++ G+ P T + + + G
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 172 -----------------------RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDF 208
R EAF V MKE +PD Y ++ I V+ F
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Query: 209 DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
+ Y EM+ + C+P+ + + +AL ++ + A
Sbjct: 671 QKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRA 708
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 2/367 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L D +Y ++ + ++ D NG D ++D G ++A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
+ +F G+ + N L+K L + + A+ + N M K + V T+N + G
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
K G ++ + ++K M + G PD TF + + G +M+ A E+ M + PD
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
YN+++ + F++ M+ Y M+ C PNL T+ ++ +L R RK+ +AL + +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS-GCTISMEAYKILLMRLSKL 310
EM V P T I C G A +++K + + S Y I++ ++
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEK 615
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+++EM + D Y ++ G C G + + E + GF PS
Sbjct: 616 LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTL 675
Query: 371 SKLINKL 377
++IN L
Sbjct: 676 GRVINCL 682
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 162/357 (45%), Gaps = 1/357 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
SY I+ L +F V MR G+ D+ +I + SF + A+++ N+
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
+ G + A ++ E + +F M V+ ++T+N + K G
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E E+++ ++ GV P+ T+ +F++GL + G +D A + + E+ +PD YN +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I+ + F E Y +M++ EP+ TY +I + V A ++ + + +G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
+P T I LC G AL ++ +A G ++ Y L+ LS G
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ EM E G +V+ + +++GLC +G + +A +++ + KG+ P ++ LI+
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 151/356 (42%), Gaps = 1/356 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
GV +L ++ + + G + A+++ G L E G D N L+ LC+ S A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
M + + + TYN + G+ K G ER++ + +G PD T+ ++G
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L G + A +F + +P+ +YN +I + E + NEM P
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ T+ ++ L + V DA + M+ G P T I + AL I
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+G + Y LL L K K ++ ++ M E G + ++ + ++ LC
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
+L+ A+ ++EE +K P + + LI+ + + + AY LF K++ A + ++
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 155/373 (41%), Gaps = 1/373 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ D+ S+ + +K+ + + +L +M G E +++ VV F ++
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS-MKGKVAFNVATYNAVAGG 131
++FG + G++ N LL+ LC++ V + + +K V N+ TYN G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ G + R++ + G PD T+ + GL + + EA M +PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ YN +I + + + + N P+ TY +I L + AL +F+
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
E L G+ P IK L + G A + + G ++ + IL+ L K+G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ + M GY D+ + +I G ++ENA+ +++ L G P Y+
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 372 KLINKLLDSNNAE 384
L+N L ++ E
Sbjct: 501 SLLNGLCKTSKFE 513
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 140/367 (38%), Gaps = 78/367 (21%)
Query: 99 CERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
C++ + A +FNSM+ +V F ++TY +V +G+F +E V+ +M + +
Sbjct: 16 CQKDPM-KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN--VGN 72
Query: 157 CTTFGVF---LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
GV+ ++ GR G++ EA VF M +C+P YNA++ + FD+ K
Sbjct: 73 HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK 132
Query: 214 YY-----------------------------------NEMLSNDCEPN------------ 226
Y N M S CE N
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 227 -----------------------LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
L T+ +++ L ++ V + ++ D++++ GVLP
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
T FI+ LC G A+ + G + Y L+ L K K +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 324 QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNA 383
G D Y +I+G C G ++ A ++ +A+ GF P + Y LI+ L
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 384 ERAYKLF 390
RA LF
Sbjct: 373 NRALALF 379
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 134/328 (40%), Gaps = 43/328 (13%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+PE + ++ ++V L + S G+++ M G D+ +I++ + + A+
Sbjct: 423 IPE-VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGW 132
++ + + G++ D N LL LC+ S + +M K A N+ T+N +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE------- 185
++ + +E +++EM+ V PD TFG ++G + G +D A+ +F M+E
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 186 -----------------------------RNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
R PD Y M+ F + + K+
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
EM+ N P+L T R+I L +V +A + M++ G++P C +
Sbjct: 662 EMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAA 721
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILL 304
P + KK+ I+ AY++L
Sbjct: 722 PKLVLEDLLKKS-----CITYYAYELLF 744
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 9/322 (2%)
Query: 46 VNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVG 105
VN + AD+L+L+ +S G + F G + L+ L + +
Sbjct: 151 VNSIIADMLVLAYANNSRFELG-----FEAFKRSGYYGYKLSALSCKPLMIALLKENRSA 205
Query: 106 AASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFL 164
V+ M + K+ NV T+N V K G+ N+ VM++M+ G +P+ ++ +
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 165 EG---LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+G LG G+M +A V M E + P+ +N +I F ++ MK + EML
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
D +PN+ +Y +I L K+ +A+ M D+M+ GV P T I C A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
L ++ + G + Y +L+ KLGK + EEM+ G DV Y +I+G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 342 LCNIGQLENAVLVMEEALHKGF 363
LC G +E A + ++ KG
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL 467
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 172/372 (46%), Gaps = 6/372 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG---HVS 70
+ ++ ++ V++ AL + + V+ DM+V G +++ + ++D + + G +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVA 129
KA V + E ++ + N+L+ + ++ + VF M + V NV +YN++
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
G G+ +E + +M + GV P+ T+ + G + + EA ++F S+K +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
P T +YN +I + + D+ EM P++ TY +I L R + A ++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
FD++ G LP T ++ C G A ++ K+ + G Y I++ K
Sbjct: 459 FDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 310 LGKCGTLLNIWEEMQ-EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRL 368
G N+ +M+ E +V Y ++ G G+LE+A +++ E L KG P+R+
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 369 VYSKLINKLLDS 380
Y + +++D
Sbjct: 578 TYEIVKEEMVDQ 589
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
K R ++E V KEM + P+ TF V + L + G+M++A +V MK C P+
Sbjct: 200 KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVV 259
Query: 194 VYNAMIFNFISVNDFDECMK---YYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
YN +I + + + K EM+ ND PNL T+ +I + + ++++F
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
EML V P + I LC+ G A+ + K +G ++ Y L+ K
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
L+++ ++ G +Y +I C +G++++ + EE +G P Y
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439
Query: 371 SKLINKLLDSNNAERAYKLF 390
+ LI L + N E A KLF
Sbjct: 440 NCLIAGLCRNGNIEAAKKLF 459
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
Y EM+ +PN+ T+ +I AL + K+ A + ++M +G P + I C
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 275 YG---PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
G + A + K+ + + ++ + IL+ K + +++EM + +
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 332 VEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFL 391
V Y +I+GLCN G++ A+ + ++ + G P+ + Y+ LIN ++ + A +F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 392 KIKHARSLENARNY 405
+K ++ R Y
Sbjct: 391 SVKGQGAVPTTRMY 404
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 181/412 (43%), Gaps = 12/412 (2%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKF----FSFMMGVLRDMRVNGVEADLLMLSIV 59
FF WA + +Y ++ L K+ F ++ +L M+ N ++++ ++
Sbjct: 145 FFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNN--KTVVLVDVL 202
Query: 60 VDSFVR-AGHVSKAIQVFGNLNELGMNRDTE--ALNVLLKCLCERSHVGAASSVFNSMKG 116
++ + +Q F + + E A N+LL LC+ V ++ M+
Sbjct: 203 LEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH 262
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
+V + T+N + GW + + ++++EM G P+ T+ ++ +AG +DEA
Sbjct: 263 RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
Query: 177 FEVFCSMKERNCQ---PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
++F M + P + MI + +EC + M+S C P++ TY +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I + KV +A + DEM G P T CF++ LC AL +Y + S C
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
S++ Y +L+ ++ N W EM + DVE Y +I+GL + + + A
Sbjct: 443 APSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
++EE ++KG V+ + +L + N + +K+ +K + AR +
Sbjct: 503 LLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRF 554
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 180/447 (40%), Gaps = 59/447 (13%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLL--------- 54
FF W++ + SY ++ L + + VL++M ++ + D+
Sbjct: 128 FFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNV 187
Query: 55 ----------MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHV 104
+ S+++D G + +AIQ F + + T + N LL +
Sbjct: 188 CVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 105 GAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVF 163
F M G A V TYN + K G + +EM+ G+ PD T+
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 164 LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
++G G+ GR+D+ F MK+ C+PD YNA+I F +++Y EM N
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP------ 277
+PN+ +Y+ ++ A + + A++ + +M R G++P T T I C G
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 278 ---------------PFAALV--------------IYKKARRSGCTISMEAYKILLMRLS 308
+ AL+ ++ K +G ++ +Y L+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 309 KLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRL 368
K L + E++ G D+ +Y I GLC++ ++E A +VM E G + L
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 369 VYSKLINKLLDSNNAERAYKLFLKIKH 395
+Y+ L++ S N L ++K
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 172/425 (40%), Gaps = 38/425 (8%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V FF +K D+ +Y ++ + + R+M+ NG++ +++ S +VD
Sbjct: 317 VCFFE-EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
+F + G + +AI+ + ++ +G+ + L+ C+ ++ A + N M + V +
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV TY A+ G R E E + +M+ GV P+ ++ + G +A MD A E+
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
+K R +PD +Y I+ S+ + NEM + N YT ++ A +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 241 RKVVDALQMFDEMLR------------------------------------HGVLPPTGT 264
+ L + DEM G+
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
T I LC AA ++++ + G AY L+ K G L + ++M
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
E G D+ Y ++ GL + QL+ A +EE + +G P ++ ++ K + +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCID 735
Query: 385 RAYKL 389
A +L
Sbjct: 736 EAVEL 740
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 167/423 (39%), Gaps = 38/423 (8%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF + A P + +Y +++ + + G+ +M+ G+ D + + ++D F
Sbjct: 249 FFKDMIGAGARPT-VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
+ G + + F + ++ D N L+ C C+ + + MKG + NV
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
+Y+ + + K G + + +M G+ P+ T+ ++ + G + +AF +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M + + + Y A+I E + + +M + PNL +Y +I ++ +
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ AL++ +E+ G+ P FI LCS AA V+ + + G + Y
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 303 LLMRLSKLGKCGTLLNIWEEMQE------------------------------------G 326
L+ K G L++ +EM+E
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 327 GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
G ++ ++ +I GLC Q+E A + E+ + KG P R Y+ L++ N A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 387 YKL 389
L
Sbjct: 668 LAL 670
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 4/405 (0%)
Query: 5 FNWAVKHPALPE--DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
F+W +K D +I+ LG+ S + ++ +G D+ + ++ +
Sbjct: 158 FDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISA 217
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER-SHVGAASSVFNSMKGK-VAF 120
F +G +A+ VF + E G NV+L + + +S+ MK +A
Sbjct: 218 FANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP 277
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ TYN + + E +V +EM+A G + D T+ L+ G++ R EA +V
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M P YN++I + DE M+ N+M +P++ TYT +++ R
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
KV A+ +F+EM G P T FIK + G + I+ + G + + +
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
LL + G + +++EM+ G+ + E + +IS G E A+ V L
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
G P Y+ ++ L E++ K+ +++ R N Y
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 148/394 (37%), Gaps = 38/394 (9%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
I +Y ++ A R M + M G + D+ + ++ F RAG V A+ +F
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFG 136
+ G + N +K R +F+ + ++ ++ T+N + + + G
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+E+ V KEM+ G P+ TF + R G ++A V+ M + PD + YN
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ +++ K EM C+PN TY ++ A ++ + + E +
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE-IGLMHSLAEEVYS 587
Query: 257 GVLPPTGTITCFIKHLCS-------------------YGPPFAAL----VIYKK------ 287
GV+ P + + +CS + P L IY +
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 288 -------ARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIIS 340
+ G T SM Y L+ S+ G I E+ G D+ Y +I
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 341 GLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
C ++ +A + E + G P + Y+ I
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 135/336 (40%), Gaps = 36/336 (10%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L DI ++ ++ G+ S + GV ++M+ G + + ++ ++ R G +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATY----NA 127
+ V+ + + G+ D N +L L + V M+ G+ N TY +A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 128 VAGGW-------------------------------SKFGRFNEIERVMKEMEADGVAPD 156
A G SK E ER E++ G +PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TT + GR + +A V MKER P A YN++++ DF + +
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
E+L+ +P++ +Y +I A R ++ DA ++F EM G++P T FI +
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
A+ + + + GC + Y ++ KL +
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ A K M + ++ +E ++L +V + + +A + F L
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRF 138
E G + D LN ++ R V A+ V + MK + ++ATYN++ S+ F
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ E +++E+ A G+ PD ++ + R RM +A +F M+ PD YN
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR-RRKVVDALQMFDEMLRH 256
I ++ + + F+E + M+ + C PN +TY I+ + RK D ++F E LR+
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK--DEAKLFVEDLRN 797
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K DI + +V GRR+ + GVL M+ G + + ++ R+
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
K+ ++ + G+ D + N ++ C + + AS +F+ M+ + +V TYN
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
G ++ F E V++ M G P+ T+ ++G + R DEA
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 168/384 (43%), Gaps = 5/384 (1%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVN--GVEADLLMLSIVVDSFVRAGH 68
HP + +Y I+ L R + F + ++ D+R + ++ + ++ ++ AG
Sbjct: 76 HPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGR 135
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK--VAFNVATYN 126
++++F + + G+ R +LN LL L + ++F + K + N+ T N
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ K +V+ E+ + G+ P+ T+ L G G M+ A V M +R
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
PD Y ++ + + F E ++M N+ EPN TY +I AL + +K +A
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
MFDEML +P + I LC A +++K ++ C L+
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
L K G+ +++E ++G S + Y +I+G+C G+L A + ++ + P+
Sbjct: 376 LCKEGRVTEARKLFDEFEKGSIPS-LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 367 RLVYSKLINKLLDSNNAERAYKLF 390
Y+ LI L + N + ++
Sbjct: 435 AFTYNVLIEGLSKNGNVKEGVRVL 458
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 158/347 (45%), Gaps = 3/347 (0%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
+ S ++ L + + F + + ++ + + G+ ++ +++V + + + A +V
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ +G+ + +L R + +A V M + + + TY + G+ K
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GRF+E VM +ME + + P+ T+GV + L + + EA +F M ER+ PD+++
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+I + DE + +ML N+C P+ + +I L + +V +A ++FDE
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FE 393
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G +P T I +C G A ++ C + Y +L+ LSK G
Sbjct: 394 KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
+ + EEM E G + + + GL +G+ E+A+ ++ A+ G
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 130/327 (39%), Gaps = 36/327 (11%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
+I + ++VKAL ++ VL ++ G+ +L+ + ++ +V G + A +V
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
+ + G D VL+ C+ A++V + M K ++ N TY + K
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV- 194
+ E + EM PD + ++ L ++DEA ++ M + NC PD A+
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 195 ---------------------------------YNAMIFNFISVNDFDECMKYYNEMLSN 221
YN +I + E + +++M
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
C+PN TY +I L + V + +++ +EML G P T + L G A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLS 308
+ I A +G + E++++ L + +
Sbjct: 490 MKIVSMAVMNG-KVDKESWELFLKKFA 515
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 114/276 (41%), Gaps = 3/276 (1%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC--TTFGVFLEGLGRAGRMDEAFE 178
N TY+++ S+ F+ +E +M ++ C F L G AGR + +
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMR 141
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY-NEMLSNDCEPNLDTYTRIITAL 237
+F + + + N ++ I FD + N S PN+ T ++ AL
Sbjct: 142 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL 201
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++ + A ++ DE+ G++P T T + + G +A + ++ G
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
Y +L+ KLG+ + ++M++ + Y +I LC + A + +E
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
L + F P + K+I+ L + + + A L+ K+
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 166/373 (44%), Gaps = 15/373 (4%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ ++ +Y +++K L + G+ + G+E ++ S ++D F + G++
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
++ ++ ++G D VL+ L ++ + A M G+ + NV +N++ G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF----------EVFC 181
W + RF+E +V + M G+ PD TF + R M++AF ++F
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM----RVSIMEDAFCKHMKPTIGLQLFD 561
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M+ D AV N +I + ++ K++N ++ EP++ TY +I R
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
++ +A ++F+ + P T T+T I LC A+ ++ G + Y
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
L+ SK ++EEMQE G S + Y II GLC G+++ A + +A+
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 362 GFCPSRLVYSKLI 374
P + Y+ LI
Sbjct: 742 KLLPDVVAYAILI 754
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 156/375 (41%), Gaps = 7/375 (1%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M G+E DL+ S ++D + +AG + ++F G+ D + + +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 104 VGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+ AS V+ M + ++ NV TY + G + GR E + ++ G+ P T+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++G + G + F ++ M + PD +Y ++ M++ +ML
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIK------HLCSYG 276
N+ + +I R + +AL++F M +G+ P T T ++ C +
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
P L ++ +R+ + + +++ L K + + + EG D+ Y
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+I G C++ +L+ A + E F P+ + + LI+ L +N+ + A ++F +
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 397 RSLENARNYWRSNGW 411
S NA Y W
Sbjct: 672 GSKPNAVTYGCLMDW 686
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 7/266 (2%)
Query: 34 FSFMMGVLRDMRVNGVEADL------LMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRD 87
F + V R M + G++ D+ + +SI+ D+F + + +Q+F + ++ D
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Query: 88 TEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
NV++ L + + AS FN++ +GK+ ++ TYN + G+ R +E ER+ +
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
++ P+ T + + L + MD A +F M E+ +P+ Y ++ F
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
D + K + EM P++ +Y+ II L +R +V +A +F + + +LP
Sbjct: 692 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 751
Query: 267 CFIKHLCSYGPPFAALVIYKKARRSG 292
I+ C G A ++Y+ R+G
Sbjct: 752 ILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 168/391 (42%), Gaps = 46/391 (11%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL +R ++AD+ +++ R G V KA+++F +LG+ +++ +L L
Sbjct: 135 VLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192
Query: 100 --------------------ERSHVGAASSVFNSM--KGKVA---------------FNV 122
E S V A V +++ KG+V +
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 123 ATYNAVAGGWSKFGRFNEIE---RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+ N V G S ++IE R++ + G AP+ TF + G + G MD AF++
Sbjct: 253 VSCNKVLKGLS----VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
F M++R +PD Y+ +I + K +++ L + ++ ++ I ++
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+ A ++ ML G+ P T T IK LC G + A +Y + + G S+
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ K G + ++E+M + GY DV +Y ++ GL G + +A+ + L
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ + +V++ LI+ N + A K+F
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 141/366 (38%), Gaps = 42/366 (11%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P D+ Y V+V L ++ M M + ++++ + ++D + R +A++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 75 VFGNLNELGMNRDTEALNVLLK------CLCERSHVGAASSVFNSM-KGKVAFNVATYNA 127
VF + G+ D +++ C+ +F+ M + K++ ++A N
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
V K R + + + + PD T+ + G R+DEA +F +K
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
P+T +I ND D ++ ++ M +PN TY ++ + + +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++F+EM G+ P S+ +Y I++ L
Sbjct: 698 KLFEEMQEKGISP-----------------------------------SIVSYSIIIDGL 722
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
K G+ NI+ + + DV Y +I G C +G+L A L+ E L G P
Sbjct: 723 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Query: 368 LVYSKL 373
L+ L
Sbjct: 783 LLQRAL 788
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/343 (18%), Positives = 130/343 (37%), Gaps = 62/343 (18%)
Query: 40 VLRDMRVNGVEADLLMLSIVVD---------------SFVRAGHVSKAIQVFGNLNELGM 84
VL+ + V+ +E +LS+V+D F + G + +A +F + + G+
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 85 NRDTEALNVLLKCLCERSHVGAASSVFN-SMKGKVAFNVATYNAVAGGWSKFGRFNEIER 143
D A + L+ + +G +F+ ++ V +V +++ + K G
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
V K M G++P+ T+ + ++GL + GR+ EAF +
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM------------------------ 413
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
Y ++L EP++ TY+ +I + + ++++M++ G P
Sbjct: 414 -----------YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
+ L G A+ K +++ + L+ +L + L ++ M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 324 QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
G DV + ++ V +ME+A K P+
Sbjct: 523 GIYGIKPDVATFTTVMR-----------VSIMEDAFCKHMKPT 554
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 8/342 (2%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERS-HVGAASSVFNSM-KG 116
V+ V ++ A + + N+ E+G+ +LNVL+K LC V A +F M K
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
+ TY + G +FGR +E +++ EM AP T+ + GL + +DEA
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
MK + +P+ Y++++ + M+ + M++ C PN+ TYT +IT
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
L + +K+ +A+++ D M G+ P G I C+ A + G T +
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 297 MEAYKILLMRLSKL--GKCGTL----LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
+ I + +++ G C ++ M+ G S +VE E ++ LC G+ +
Sbjct: 367 RLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 426
Query: 351 AVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
AV +++E + G PS+ + LI LD A L+
Sbjct: 427 AVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLR 468
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 7/256 (2%)
Query: 146 KEMEADGVAPDCTTFGVFLEGLGR-AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
K M G+ P + V ++ L R G +D ++F M +R C PD+ Y +I
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 205 VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
DE K + EM+ DC P + TYT +I L + V +A++ +EM G+ P T
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
+ + LC G A+ +++ GC +M Y L+ L K K + + + M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY------SKLINKLL 378
G D +Y +ISG C I + A ++E + G P+RL + S + + L
Sbjct: 325 LQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGL 384
Query: 379 DSNNAERAYKLFLKIK 394
+N RA+ L+L ++
Sbjct: 385 CANYPSRAFTLYLSMR 400
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
A+G D ++FG + L A + A ++ MK NC + ++ + V+
Sbjct: 44 ANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPF 103
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
+ ++ +++M DC+P+ Y ++ L+ ++ A + + M G+ P ++ I
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 270 KHLC-SYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
K LC + G A L I+ + + GC Y L+ L + G+ ++ EM E
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
+ V Y +I+GLC ++ A+ +EE KG P+ YS L++ L + +A +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 389 LF 390
LF
Sbjct: 284 LF 285
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 171/365 (46%), Gaps = 1/365 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
GV+ D+++ S +D +V++G ++ A V+ + G++ + +L+K LC+ + A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 108 SSVFNS-MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
++ +K + ++ TY+++ G+ K G + ++M G PD +GV ++G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L + G M A M ++ + + V+N++I + +N FDE +K + M +P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ T+T ++ + ++ +AL +F M + G+ P I C + P L ++
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+R+ + + +++ L K + + + EG D+ Y +I G C++
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYW 406
+L+ A + E F P+ + + LI+ L +N+ + A ++F + S NA Y
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 407 RSNGW 411
W
Sbjct: 711 CLMDW 715
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 168/398 (42%), Gaps = 36/398 (9%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ ++ +Y +++K L + G+ + G+E ++ S ++D F + G++
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
++ ++ ++G D VL+ L ++ + A M G+ + NV +N++ G
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
W + RF+E +V + M G+ PD TF + GR++EA +F M + +PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 192 TAVYNAMIFNF-------ISVNDFD----------------------------ECMKYYN 216
Y +I F I + FD + K++N
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
++ EP++ TY +I R++ +A ++F+ + P T T+T I LC
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
A+ ++ G + Y L+ SK ++EEMQE G S + Y
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
II GLC G+++ A + +A+ P + Y+ LI
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G+E D L ++D+F + + +Q+F + ++ D NV++ L + + A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 108 SSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
S FN++ +GK+ ++ TYN + G+ R +E ER+ + ++ P+ T + +
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L + MD A +F M E+ +P+ Y ++ F D + K + EM P+
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ +Y+ II L +R +V +A +F + + +LP I+ C G A ++Y+
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 287 KARRSG 292
R+G
Sbjct: 801 HMLRNG 806
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 151/360 (41%), Gaps = 1/360 (0%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P D+ Y V+V L ++ M M + ++++ + ++D + R +A++
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWS 133
VF + G+ D +++ + A +F M K + + Y + +
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
K + ++ M+ + ++ D V + L + R+++A + F ++ E +PD
Sbjct: 578 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 637
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
YN MI + S+ DE + + + PN T T +I L + + A++MF M
Sbjct: 638 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 697
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
G P T C + + ++++ + G + S+ +Y I++ L K G+
Sbjct: 698 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 757
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
NI+ + + DV Y +I G C +G+L A L+ E L G P L+ L
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 142/336 (42%), Gaps = 2/336 (0%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN-SMKGK 117
V+D+ G V+KA+ + E G + N +LK L + AS + + +
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCG 281
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
A NV T+ + G+ K G + + K ME G+ PD + ++G +AG +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
++F + + D V+++ I ++ D Y ML PN+ TYT +I L
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
+ ++ +A M+ ++L+ G+ P T + I C G + +Y+ + G +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
Y +L+ LSK G + +M +V V+ +I G C + + + A+ V
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
G P ++ ++ + E A LF ++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 168/391 (42%), Gaps = 46/391 (11%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL +R ++AD+ +++ R G V KA+++F +LG+ +++ +L L
Sbjct: 135 VLGSIRDRSLDADVC--KFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLI 192
Query: 100 --------------------ERSHVGAASSVFNSM--KGKVA---------------FNV 122
E S V A V +++ KG+V +
Sbjct: 193 GSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 123 ATYNAVAGGWSKFGRFNEIE---RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+ N V G S ++IE R++ + G AP+ TF + G + G MD AF++
Sbjct: 253 VSCNKVLKGLS----VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
F M++R +PD Y+ +I + K +++ L + ++ ++ I ++
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+ A ++ ML G+ P T T IK LC G + A +Y + + G S+
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ K G + ++E+M + GY DV +Y ++ GL G + +A+ + L
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ + +V++ LI+ N + A K+F
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/367 (18%), Positives = 138/367 (37%), Gaps = 51/367 (13%)
Query: 40 VLRDMRVNGVEADLLMLSIVVD---------------SFVRAGHVSKAIQVFGNLNELGM 84
VL+ + V+ +E +LS+V+D F + G + +A +F + + G+
Sbjct: 258 VLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI 317
Query: 85 NRDTEALNVLLKCLCERSHVGAASSVFN-SMKGKVAFNVATYNAVAGGWSKFGRFNEIER 143
D A + L+ + +G +F+ ++ V +V +++ + K G
Sbjct: 318 EPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
V K M G++P+ T+ + ++GL + GR+ EAF +
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM------------------------ 413
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
Y ++L EP++ TY+ +I + + ++++M++ G P
Sbjct: 414 -----------YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
+ L G A+ K +++ + L+ +L + L ++ M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 324 QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNA 383
G DV + ++ G+LE A+ + G P L Y LI+
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 384 ERAYKLF 390
+LF
Sbjct: 583 TIGLQLF 589
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 153/347 (44%), Gaps = 5/347 (1%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y I+ LG+ + F V +M + ++++ + A V +A+ VF
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNE 140
E G++ D A + LL LC HV A ++F S + + ++ N + GW G +E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 141 IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
+R K++ A PD ++G + L + G++ +A E++ +M + PD + N +I
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM-LRHGVL 259
E ++ + E+ +PN+ TY ++ L + R+ ++ +EM L+ G
Sbjct: 326 ALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSC 385
Query: 260 PPTGTITCFIKHLCSYGPPFAAL-VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P + L Y + ++ ++ ++ C ++ + Y ++ + K +
Sbjct: 386 SPNDVTFSY---LLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVRE 442
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
IW EM+ G D Y I GL G++ A+ +E + KG P
Sbjct: 443 IWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 42 RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
+D+ + D++ ++++ + G + KA++++ + + N D + N ++ LC +
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 102 SHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG--VAPDCT 158
+ A VF + K NV TYN++ K R ++ +++EME G +P+
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
TF L+ R+ +D E M + C+ + +YN M ++ + ++ + ++EM
Sbjct: 391 TFSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
+ P+ TYT I L + K+ +AL F EM+ G++P T
Sbjct: 448 ERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
+ L+ LG+ R +E +VF M +R+ + Y ++ + + + DE + +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL------- 272
+ +L + ++ L R + V A +F R C IK +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE--------FGCDIKAMNMILNGW 257
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
C G A +K S C + +Y ++ L+K GK G + ++ M + + DV
Sbjct: 258 CVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDV 317
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
++ +I LC ++ A+ V E KG P+ + Y+ L+ L E+ ++L
Sbjct: 318 KICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWEL 374
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 179/407 (43%), Gaps = 45/407 (11%)
Query: 25 VKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGM 84
+K L R + F+ + VL ++R V+ LS V+ ++ +G +SKA++++ + EL
Sbjct: 106 LKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYD 165
Query: 85 N-RDTEALNVLLKCLCERSHVGAASSVFNSM---------------------KGKVAF-- 120
+ D A N LL L + +G A V++ M +GKV
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR 225
Query: 121 -------------NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGL 167
N+ YN + GG+ K G V KE++ G P TFG + G
Sbjct: 226 KLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285
Query: 168 GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI---FNFISVNDFDECMKYYNEMLSNDCE 224
+ G + + +KER + N +I + D E + + +++NDC+
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW---IIANDCK 342
Query: 225 PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC-SYGPPFAALV 283
P++ TY +I L + K A+ DE + G++P + I+ C S A+ +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 284 IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC 343
+ + A R GC + Y IL+ L G +N+ ++ + G S D +Y ++SGLC
Sbjct: 403 LLQMAER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 344 NIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+ A L+ E L + P VY+ LI+ + S + + A K+F
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 167/400 (41%), Gaps = 17/400 (4%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V F + A K +P ++ SY +++A + K + +L M G + D++ I++
Sbjct: 365 VGFLDEASKKGLIPNNL-SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
V +GH+ A+ + L + G++ D N+L+ LC+ A +F+ M + +
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ Y + G+ + G F+E +V GV D ++G R+G +DEA
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM 543
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M E + PD Y+ +I ++ D +K + M N C+PN+ TYT +I +
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQ 603
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG-CTISMEA 299
A + F EM ++P T T I+ L V Y + + C +
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 300 YKILLMRL--------------SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
+ LL S G+ + M+ G+S Y + LC
Sbjct: 664 FNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH 723
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G ++ A + ++ + KGF P + ++ +++ N+++
Sbjct: 724 GMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 146/370 (39%), Gaps = 18/370 (4%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L +++ G+ + L+ ++D+ R G+ + G + D N+L+ LC
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC 356
Query: 100 ERSHVGAASSVFN--SMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
+ A + S KG + N+ +Y + + K ++ +++ +M G PD
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNL-SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
T+G+ + GL +G MD+A + + +R PD A+YN ++ F ++E
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSE 475
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
ML + P+ Y +I +R +A ++F + GV IK C G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
AL + Y ++ K T + I+ M++ +V Y
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+I+G C G + A +E + P+ + Y+ LI L K +
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL---------------AKESS 640
Query: 398 SLENARNYWR 407
+LE A YW
Sbjct: 641 TLEKAVYYWE 650
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/202 (17%), Positives = 89/202 (44%), Gaps = 1/202 (0%)
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS-N 221
FL+ L R +E +V +++ N + + ++ + + ++ Y+ ++
Sbjct: 105 FLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELY 164
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
D P++ +++ L++ R++ DA +++DEM G + +K +C+ G
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ + GC ++ Y ++ KLG +++E++ G+ +E + +I+G
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMING 284
Query: 342 LCNIGQLENAVLVMEEALHKGF 363
C G + ++ E +G
Sbjct: 285 FCKEGDFVASDRLLSEVKERGL 306
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 3/356 (0%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D+ I++ AG + K+ + L E G + + L+ C++ + A +F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 112 NSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
M GK+ N TY + G K G + + ++M+ DGV P+ T+ + L +
Sbjct: 222 FEM-GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
GR +AF+VF M+ER + YN +I +E K ++M S+ PNL T
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR 289
Y +I K+ AL + ++ G+ P T + C G A + K+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
G S Y IL+ ++ + + M+E G DV Y +I G C GQ+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
A + + + K P+ ++Y+ +I ++ RA KL +++ N +Y
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 152/337 (45%), Gaps = 7/337 (2%)
Query: 36 FMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLL 95
F MG L G+ A+ +++++ + G + +++ + E G+ + N ++
Sbjct: 222 FEMGKL------GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 96 KCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
LC+ A VF+ M+ + V+ N+ TYN + GG + + NE +V+ +M++DG+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
P+ T+ ++G G++ +A + +K R P YN ++ F D K
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
EM +P+ TYT +I R + A+Q+ M G++P T + I C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
G A ++K C + Y +++ K G L + +EM+E + +V
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
Y Y+I LC + + A ++E+ + G PS + S
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 156/351 (44%)
Query: 55 MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM 114
+ ++++S+V++ ++ +I F + + G + N LL + S S FN
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
K KV +V ++ + G + G + ++ E+ G +P+ + ++G + G ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
+A ++F M + + Y +I + + Y +M + PNL TY ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 235 TALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
L + + DA Q+FDEM GV T I LC A + + + G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 295 ISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLV 354
++ Y L+ +GK G L++ +++ G S + Y ++SG C G A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 355 MEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
++E +G PS++ Y+ LI+ S+N E+A +L L ++ + + Y
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 7/254 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
+I +Y ++ L R + V+ M+ +G+ +L+ + ++D F G + KA+ +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+L G++ N+L+ C + A+ + M+ + + + TY + F
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI---DTF 418
Query: 136 GRFNEIERVMK---EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
R + +E+ ++ ME G+ PD T+ V + G G+M+EA +F SM E+NC+P+
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
+YN MI + +K EM + PN+ +Y +I L + RK +A ++ ++
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 253 MLRHGVLPPTGTIT 266
M+ G+ P T ++
Sbjct: 539 MIDSGIDPSTSILS 552
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K L + +Y ++V R+ S ++++M G++ + +I++D+F R+ +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
+ KAIQ+ ++ ELG+ D +VL+ C + + AS +F SM K N YN
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ G+ K G +++KEME +AP+ ++ +E L + + EA + M +
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 188 CQPDTAV 194
P T++
Sbjct: 544 IDPSTSI 550
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 174/417 (41%), Gaps = 20/417 (4%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRV------NGVEADLLML 56
+ F WA P + +V +L + + F ++ D RV N V AD +
Sbjct: 120 SVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFD-RVRSDEGSNLVSADTFI- 177
Query: 57 SIVVDSFVRAGHVSKAIQVF--GNLNELGMNRDTEA--LNVLLKCLCERSHVGAASSVFN 112
+++ + RAG V +AI+ F E TE L VLL LC+ HV AS
Sbjct: 178 -VLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLE 236
Query: 113 SMKGKVAFN----VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
+ G + N V +N + GW + + + E++ +EM+A V P T+G +EG
Sbjct: 237 RIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYC 296
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
R R+ A EV MK + + V+N +I E + + P +
Sbjct: 297 RMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIV 356
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
TY ++ + + A ++ M+ GV P T T F K+ + + +Y K
Sbjct: 357 TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL 416
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
+G + Y ++L L + GK + + +EM+ G D+ +I LC + L
Sbjct: 417 IEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEML 476
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLD---SNNAERAYKLFLKIKHARSLENA 402
E A + A+ +G P + + + N L S+ A+R L + H++ L N
Sbjct: 477 EEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNT 533
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 167/377 (44%), Gaps = 3/377 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++VK L R K VL++M G ++++ + ++DSF+ AG ++KAI++ +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV--ATYNAVAGGWSKFGR 137
G++ + N L+K C+ A + M + FNV ++ +V
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS-IGFNVNQGSFTSVICLLCSHLM 450
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
F+ R + EM ++P + GL + G+ +A E++ + DT NA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
++ DE + E+L C + +Y +I+ ++K+ +A DEM++ G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P T + I L + A+ + +R+G + Y +++ K +
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
++EM + VY ++I C G+L A+ + E+ HKG P+ Y+ LI +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 378 LDSNNAERAYKLFLKIK 394
+ E A LF +++
Sbjct: 691 SIISRVEEAKLLFEEMR 707
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 160/385 (41%), Gaps = 37/385 (9%)
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK- 115
+I++ S VRA K + F + + G++ D + C+ V A +F+ M+
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
VA NV T+N V G GR++E ++M G+ P T+ + ++GL RA R+ +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY---------------YN---- 216
A+ V M ++ P+ VYN +I +FI ++ ++ YN
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 217 ----------------EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
EMLS N ++T +I L AL+ EML + P
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
G +T I LC +G AL ++ + G + LL L + GK I
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
+E+ G D Y +ISG C +L+ A + ++E + +G P YS LI L +
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 381 NNAERAYKLFLKIKHARSLENARNY 405
N E A + + K L + Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTY 613
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 158/371 (42%), Gaps = 1/371 (0%)
Query: 19 GSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGN 78
GS+ ++ L F + + +M + + +L+ ++ + G SKA++++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGR 137
G DT N LL LCE + A + + G+ + +YN + G +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+E + EM G+ PD T+ + + GL +++EA + + K PD Y+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
MI +E ++++EM+S + +PN Y +I A R ++ AL++ ++M G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P + T T IK + A +++++ R G ++ Y L+ KLG+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+ EM + Y +I G G + A ++ E KG P + Y + I
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 378 LDSNNAERAYK 388
L A+K
Sbjct: 796 LKQGGVLEAFK 806
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 146/335 (43%), Gaps = 1/335 (0%)
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCER-SHVGAASSVFNSMKGKVAFNVATYNAVAG 130
A++ G + M+ L L+ LC+ H A F + + T NA+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G + G+ +E R+ KE+ G D ++ + G ++DEAF M +R +P
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D Y+ +I ++N +E ++++++ N P++ TY+ +I + + + + F
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
DEM+ V P T I+ C G AL + + + G + + Y L+ +S +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+ ++EEM+ G +V Y +I G +GQ+ ++ E K P+++ Y
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ +I N A +L +++ + ++ Y
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 146/382 (38%), Gaps = 37/382 (9%)
Query: 54 LMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS 113
L++ + F R G A+ VF L GM N+LL L + F+
Sbjct: 193 LLIEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+ V+ +V + + K G+ E ++ +ME GVAP+ TF ++GLG GR
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
DEAF M ER +P Y+ ++ + EM PN+ Y +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I + + + A+++ D M+ G+ + T IK C G A + K+ G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 294 TISMEAY-----------------------------------KILLMRLSKLGKCGTLLN 318
++ ++ L+ L K GK L
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
+W + G+ D ++ GLC G+L+ A + +E L +G R+ Y+ LI+
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 379 DSNNAERAYKLFLKIKHARSLE 400
+ A+ +FL R L+
Sbjct: 552 GKKKLDEAF-MFLDEMVKRGLK 572
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 2/250 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F + VK P++ +Y +++ L + D + NG+ D+ S+++D
Sbjct: 562 FLDEMVKRGLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
+A + + F + + +T N L++ C + A + MK K ++ N
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
ATY ++ G S R E + + +EM +G+ P+ + ++G G+ G+M + +
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M +N P+ Y MI + + E + NEM P+ TY I L++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 243 VVDALQMFDE 252
V++A + DE
Sbjct: 801 VLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 167/377 (44%), Gaps = 3/377 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++VK L R K VL++M G ++++ + ++DSF+ AG ++KAI++ +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV--ATYNAVAGGWSKFGR 137
G++ + N L+K C+ A + M + FNV ++ +V
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS-IGFNVNQGSFTSVICLLCSHLM 450
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
F+ R + EM ++P + GL + G+ +A E++ + DT NA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
++ DE + E+L C + +Y +I+ ++K+ +A DEM++ G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P T + I L + A+ + +R+G + Y +++ K +
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
++EM + VY ++I C G+L A+ + E+ HKG P+ Y+ LI +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 378 LDSNNAERAYKLFLKIK 394
+ E A LF +++
Sbjct: 691 SIISRVEEAKLLFEEMR 707
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 160/385 (41%), Gaps = 37/385 (9%)
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK- 115
+I++ S VRA K + F + + G++ D + C+ V A +F+ M+
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 288
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
VA NV T+N V G GR++E ++M G+ P T+ + ++GL RA R+ +
Sbjct: 289 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY---------------YN---- 216
A+ V M ++ P+ VYN +I +FI ++ ++ YN
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 217 ----------------EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
EMLS N ++T +I L AL+ EML + P
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
G +T I LC +G AL ++ + G + LL L + GK I
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
+E+ G D Y +ISG C +L+ A + ++E + +G P YS LI L +
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 381 NNAERAYKLFLKIKHARSLENARNY 405
N E A + + K L + Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTY 613
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 158/371 (42%), Gaps = 1/371 (0%)
Query: 19 GSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGN 78
GS+ ++ L F + + +M + + +L+ ++ + G SKA++++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGR 137
G DT N LL LCE + A + + G+ + +YN + G +
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+E + EM G+ PD T+ + + GL +++EA + + K PD Y+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
MI +E ++++EM+S + +PN Y +I A R ++ AL++ ++M G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P + T T IK + A +++++ R G ++ Y L+ KLG+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+ EM + Y +I G G + A ++ E KG P + Y + I
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 378 LDSNNAERAYK 388
L A+K
Sbjct: 796 LKQGGVLEAFK 806
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 146/335 (43%), Gaps = 1/335 (0%)
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCER-SHVGAASSVFNSMKGKVAFNVATYNAVAG 130
A++ G + M+ L L+ LC+ H A F + + T NA+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G + G+ +E R+ KE+ G D ++ + G ++DEAF M +R +P
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D Y+ +I ++N +E ++++++ N P++ TY+ +I + + + + F
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
DEM+ V P T I+ C G AL + + + G + + Y L+ +S +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+ ++EEM+ G +V Y +I G +GQ+ ++ E K P+++ Y
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ +I N A +L +++ + ++ Y
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 146/382 (38%), Gaps = 37/382 (9%)
Query: 54 LMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS 113
L++ + F R G A+ VF L GM N+LL L + F+
Sbjct: 193 LLIEVYCTQFKRDG-CYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+ V+ +V + + K G+ E ++ +ME GVAP+ TF ++GLG GR
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
DEAF M ER +P Y+ ++ + EM PN+ Y +
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I + + + A+++ D M+ G+ + T IK C G A + K+ G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 294 TISMEAY-----------------------------------KILLMRLSKLGKCGTLLN 318
++ ++ L+ L K GK L
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
+W + G+ D ++ GLC G+L+ A + +E L +G R+ Y+ LI+
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 379 DSNNAERAYKLFLKIKHARSLE 400
+ A+ +FL R L+
Sbjct: 552 GKKKLDEAF-MFLDEMVKRGLK 572
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 2/250 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F + VK P++ +Y +++ L + D + NG+ D+ S+++D
Sbjct: 562 FLDEMVKRGLKPDNY-TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
+A + + F + + +T N L++ C + A + MK K ++ N
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
ATY ++ G S R E + + +EM +G+ P+ + ++G G+ G+M + +
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M +N P+ Y MI + + E + NEM P+ TY I L++
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 243 VVDALQMFDE 252
V++A + DE
Sbjct: 801 VLEAFKGSDE 810
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 2/312 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V + V+ P D+ +Y +V L +R + +L M +EA++++ S V+D
Sbjct: 203 VALIDRMVQRGCQP-DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
S + H A+ +F + G+ + + L+ CLC AS + + M + K+
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
N+ T++A+ + K G+ + E++ +EM + P+ T+ + G R+ EA ++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M ++C P+ YN +I F D+ M+ + EM N TYT +I +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
R +A +F +M+ GV P T + LC G A+V+++ +RS + Y
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 301 KILLMRLSKLGK 312
I++ + K GK
Sbjct: 502 NIMIEGMCKAGK 513
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 154/332 (46%), Gaps = 1/332 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ ++ L S + ++ M G + DL+ VV+ + G A+ +
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + + + ++ LC+ H A ++F M+ K V NV TY+++ +
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GR+++ R++ +M + P+ TF ++ + G++ +A +++ M +R+ P+ Y
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+++I F ++ E + M+ DC PN+ TY +I + ++V +++F EM +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G++ T T T I A +++K+ G ++ Y ILL L K GK
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQ 347
+ ++E +Q D+ Y +I G+C G+
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 146/326 (44%), Gaps = 3/326 (0%)
Query: 82 LGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFGRFN 139
LG++ + N+L+ C C S + A ++ M K+ + ++ T N++ G+ R +
Sbjct: 107 LGISHNLYTYNILINCFCRCSRLSLALALLGKMM-KLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
+ ++ +M G PD TF + GL + EA + M +R CQPD Y A++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
D D + N+M + E N+ Y+ +I +L + R DAL +F EM GV
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
P T + I LC+YG A + ++ + L+ K GK +
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
+EEM + ++ Y +I+G C + +L A ++E + K P+ + Y+ LIN
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 380 SNNAERAYKLFLKIKHARSLENARNY 405
+ ++ +LF ++ + N Y
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTY 431
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 138/328 (42%), Gaps = 1/328 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G + D + + ++ S+A+ + + + G D ++ LC+R A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 108 SSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
++ N M+ K+ NV Y+ V K+ ++ + EME GV P+ T+ +
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L GR +A + M ER P+ ++A+I F+ + K Y EM+ +PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ TY+ +I ++ +A QM + M+R LP T I C + +++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ + G + Y L+ + C ++++M G ++ Y ++ GLC G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLI 374
+L A++V E P Y+ +I
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 156/344 (45%), Gaps = 1/344 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G E D++ L+ +++ F +S A+ + + E+G DT L+ L + A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
++ + M + ++ TY AV G K G + ++ +MEA + + + ++
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L + D+A +F M+ + +P+ Y+++I + + + + ++M+ PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
L T++ +I A +++ K+V A ++++EM++ + P T + I C A + +
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
R C ++ Y L+ K + + ++ EM + G + Y +I G
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+NA +V ++ + G P+ L Y+ L++ L + +A +F
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 166/396 (41%), Gaps = 5/396 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F + P I + ++ A+ + F ++ M + G+ +L +I+++
Sbjct: 63 IGLFGVMAQSRPFPSII-EFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
F R +S A+ + G + +LG D LN LL C + + A ++ + M +
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ T+ + G + +E ++ M G PD T+G + GL + G D A +
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M+ + + +Y+ +I + D+ + + EM + PN+ TY+ +I+ L
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+ DA ++ +M+ + P T + I G A +Y++ + ++ Y
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
L+ L + G + E M +V Y +I+G C +++ + + E
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 361 KGFCPSRLVYSKLINKLL---DSNNAERAYKLFLKI 393
+G + + Y+ LI+ D +NA+ +K + +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 35/253 (13%)
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+D+A +F M + P ++ ++ +N FD + + +M NL TY
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 233 IITALLR-----------------------------------RRKVVDALQMFDEMLRHG 257
+I R ++ DA+ + D+M+ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
P T T T I L + A+ + + + GC + Y ++ L K G L
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
N+ +M+ ++V +Y +I LC ++A+ + E +KG P+ + YS LI+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 378 LDSNNAERAYKLF 390
+ A +L
Sbjct: 299 CNYGRWSDASRLL 311
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 170/375 (45%), Gaps = 2/375 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ SY ++ R+K V ++ G++ + SI++D R A++V
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSK 134
++ + + ++ LC+ A + +M + ++ + +YN++ G+ K
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G + +EM +G++P+ T+ + GL + RMD+A E+ MK + + D
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
Y A+I F ++ + ++E+L P+ Y +I+ +V AL ++ +ML
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+ G+ GT T I L G A +Y + + G Y +++ LSK G+
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
++ ++EEM++ + +V +Y +I+G G L+ A + +E L KG P + L+
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 375 NKLLDSNNAERAYKL 389
+ + + RA L
Sbjct: 837 SGQVGNLQPVRAASL 851
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 157/409 (38%), Gaps = 38/409 (9%)
Query: 42 RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
+ M V G+ + + ++ +++ +A+++F E G+ + N +L LC++
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQ 456
Query: 102 SHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
A+ + + M+ + + NV +YN V G + + V + G+ P+ T+
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 161 GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY------------------------- 195
+ ++G R A EV M N + + VY
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 196 -----------NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
N++I F + D + Y EM N PN+ TYT ++ L + ++
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
AL+M DEM GV I C +A ++ + G S Y L+
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
LG L+++++M + G D+ Y +I GL G L A + E G
Sbjct: 697 SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Query: 365 PSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYWRSNGWHF 413
P ++Y+ ++N L + K+F ++K N Y H+
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 156/355 (43%), Gaps = 9/355 (2%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M G + + S++++ F + G + KA++ + + LG+ ++ +++ +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 104 VGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVF 163
A +F+ NV N + K G+ +E ++ +ME+ G+ P+ ++
Sbjct: 425 HEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 164 LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
+ G R MD A VF ++ E+ +P+ Y+ +I +D ++ N M S++
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC-----FIKHLCSYGPP 278
E N Y II L + + A ++ M+ L ++C I G
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL----CVSCMSYNSIIDGFFKEGEM 600
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
+A+ Y++ +G + ++ Y L+ L K + L + +EM+ G D+ Y +
Sbjct: 601 DSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
I G C +E+A + E L +G PS+ +Y+ LI+ + N A L+ K+
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 129/317 (40%), Gaps = 9/317 (2%)
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATY----NAVAGGWSKFGRF 138
G ++ A N LL + A + N M + +V + N +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM---LELDVIPFFPYVNRTLSALVQRNSL 214
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E + + M A GV D T + + R + EA EV ER +PD+ +Y+
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274
Query: 199 IFNFISVNDFDECMKYYNEMLSND-CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
+ D EM C P+ +TYT +I A +++ + DA+++ DEML G
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ T I C +ALV++ K + G + + + +L+ K G+ L
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+++M+ G + V II G + E A+ + +E+ G + V + +++ L
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWL 453
Query: 378 LDSNNAERAYKLFLKIK 394
+ A +L K++
Sbjct: 454 CKQGKTDEATELLSKME 470
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 163/380 (42%), Gaps = 10/380 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
DI ++ V + L R F + M G E D++ +I+++ RAG V+ A++++
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAA-SSVFNSMK-GKVAFNVATYNAVAGGWSK 134
+ G++ D +A L+ LC V A V +K +V + YNA+ G+ K
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
GR + E + M G PD T+ V L + A V M Q D
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEP----NLDTYTRIITALLRRRKVVDALQMF 250
YN ++ V+ D+C YN M+ + EP ++ +Y+ +I R A ++F
Sbjct: 293 YNQLLKRHCRVSHPDKC---YNFMV-KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLF 348
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
+EM + G++ T T IK G A + + G + Y +L L K
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
G ++ +M E + D Y +ISGLC G++ A+ + E+ K CP L +
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Query: 371 SKLINKLLDSNNAERAYKLF 390
+I L+ AYK++
Sbjct: 469 KFIIGGLIRGKKLSAAYKVW 488
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 143/350 (40%), Gaps = 6/350 (1%)
Query: 60 VDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVA 119
+ + V++G + A+QVF + + N + L S A +++ MK +
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK-PMG 74
Query: 120 FNVA--TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
F++ TY+ G K +F+ I+ ++ +ME G PD F V+L+ L R ++ A
Sbjct: 75 FSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAV 134
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
+ F M +R +PD Y +I + ++ +N M+ + P+ ++ L
Sbjct: 135 QTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL 194
Query: 238 LRRRKVVDALQMFDEMLRHG-VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
RKV A +M E ++ V T I C G A + + GC
Sbjct: 195 CHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPD 254
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV-LVM 355
+ Y +LL + EM G D Y ++ C + + ++
Sbjct: 255 LVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 356 EEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+E +GFC + YS LI ++N +AY+LF +++ + N Y
Sbjct: 315 KEMEPRGFCDV-VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y V++ GV+ +M +G++ D + ++ R H K
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
E D + + L++ C S+ A +F M+ K + NV TY ++ + +
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G + ++++ +M G++PD + L+ L ++G +D+A+ VF M E PD Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N++I E +K + +M +C P+ T+ II L+R +K+ A +++D+M+
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 256 HGVLPPTGTITCFIKHLCS 274
G IK CS
Sbjct: 494 KGFTLDRDVSDTLIKASCS 512
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 148/347 (42%), Gaps = 3/347 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V +N ++ P++ ++V RK V +++ V+ ++ + ++
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAF 120
F +AG + KA + ++++G D NVLL + + + A V M + +
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Query: 121 NVATYNAVAGGWSKFGRFNEIERVM-KEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+ +YN + + ++ M KEME G D ++ +E RA +A+ +
Sbjct: 289 DAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRL 347
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
F M+++ + Y ++I F+ + K ++M P+ YT I+ L +
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
V A +F++M+ H + P + I LC G A+ +++ + C
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+K ++ L + K +W++M + G++ D +V + +I C++
Sbjct: 468 FKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 152/341 (44%), Gaps = 1/341 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G ++ + +I+++ F + G++S A +VF + + + + N L+ C+ ++
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 108 SSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ + M K + +V TY+A+ K + + + EM G+ P+ F + G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
R G +D E + M + QPD +YN ++ F D + M+ P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
TYT +I R V AL++ EM ++G+ + + +C G A +
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ R+G Y +++ K G T + +EMQ G+ V Y +++GLC +G
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAY 387
Q++NA ++++ L+ G P + Y+ L+ N+ + Y
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 158/414 (38%), Gaps = 28/414 (6%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLR-------------------DM 44
FF + P + +Y V+ + L + F+ ++ +M
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 45 RVN---GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
RV G D LM++ + G + AIQ F + + LL + +
Sbjct: 164 RVTPMCGFLVDALMIT-----YTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKL 218
Query: 102 SHVGAASSVF-NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
+ G + + NV +N + + K G ++ ++V E+ + P +F
Sbjct: 219 NPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSF 278
Query: 161 GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS 220
+ G + G +DE F + M++ +PD Y+A+I N D ++EM
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 221 NDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFA 280
PN +T +I R ++ + + +ML G+ P + C G A
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 281 ALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIIS 340
A I R G Y L+ + G T L I +EM + G D + ++
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 341 GLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G+C G++ +A + E L G P + Y+ +++ +A+ +KL +++
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 169/397 (42%), Gaps = 37/397 (9%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ FF WA K D +Y +++ L + + M +++ +V +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQE--------------VVRN 155
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAF 120
++V VS A+ L+ L+K L V A SVF KG K
Sbjct: 156 TYV---SVSPAV-----------------LSELVKALGRAKMVSKALSVFYQAKGRKCKP 195
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA-PDCTTFGVFLEGLGRAGRMDEAFEV 179
+TYN+V + G+ ++ V EM +G PD T+ + + GR D A +
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
F MK+ QP +Y ++ + V ++ + + EM C P + TYT +I L +
Sbjct: 256 FDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK 315
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+V +A + +MLR G+ P + + L G ++ + CT ++ +
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS 375
Query: 300 YKILLMRLSKLGKCGTLLNIW-EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
Y ++ L + + ++ W ++M+ S Y +I G C ++E A+L++EE
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
KGF P Y LIN L + E A +LF ++K
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 149/347 (42%), Gaps = 2/347 (0%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D + S ++ S+ + G AI++F + + M + LL + V A +F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 112 NSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRA 170
MK + V TY + G K GR +E K+M DG+ PD + LG+
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFN-FISVNDFDECMKYYNEMLSNDCEPNLDT 229
GR++E VF M C P YN +I F S E ++++M ++ P+ T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR 289
Y+ +I + +V AL + +EM G P I L AA ++K+ +
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
+ +S Y +++ K GK ++++ EM+ G DV Y ++SG+ G +
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
A ++ + G ++ ++N + RA ++F IKH+
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 154/338 (45%), Gaps = 8/338 (2%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++K LG+ G +DM +G+ D++ L+ +++ + G V + VF
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF--- 361
Query: 80 NELGMNRDTEAL---NVLLKCLCE-RSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSK 134
+E+GM R T + N ++K L E ++HV SS F+ MK V+ + TY+ + G+ K
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK 421
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
R + +++EM+ G P + + LG+A R + A E+F +KE + V
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV 481
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
Y MI +F E + +NEM + P++ Y +++ +++ + +A + +M
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+G + + G P A+ +++ + SG Y LL + G
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
+ EM++ G+ D Y I+ + N+ ++ V
Sbjct: 602 EAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDV 639
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 160/375 (42%), Gaps = 17/375 (4%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y ++ L + +M+ G+ AD+ +I+VDSF +AG + +A + F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ E+G + L+ + V A+ +F +M + N+ TY+A+ G K
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 136 GRFN----------------EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
G+ +++ K+ + + P+ T+G L+G ++ R++EA ++
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+M C+P+ VY+A+I V DE + EM + L TY+ +I +
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++ A ++ +ML + P T I LC G A + + GC ++
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y ++ +GK T L + E M G + + Y +I C G L+ A ++EE
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 360 HKGFCPSRLVYSKLI 374
+ Y K+I
Sbjct: 842 QTHWPTHTAGYRKVI 856
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 166/402 (41%), Gaps = 19/402 (4%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K L D+ +Y ++V + + +MR G +++ + ++ ++++A
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-------- 120
VS A ++F + G + + L+ C+ V A +F M G
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 121 ---------NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
NV TY A+ G+ K R E +++ M +G P+ + ++GL + G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
++DEA EV M E Y+++I + V D K ++ML N C PN+ YT
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
+I L + K +A ++ M G P T T I G L + ++
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G + Y++L+ K G N+ EEM++ + + Y +I G + +
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIES 866
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+ +++E P VY LI+ L+ + E A +L ++
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 164/400 (41%), Gaps = 34/400 (8%)
Query: 26 KALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMN 85
K LGR K VL M + G + + +V ++ +G S A ++ + + G
Sbjct: 351 KQLGRCK------RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 86 RDTEALNVLLKCLCERSH------VGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
N+L+ +C + A ++ M V N ++ G++
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ V++EM G PD +T+ L L A +M+ AF +F MK D Y M
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ +F ++ K++NEM C PN+ TYT +I A L+ +KV A ++F+ ML G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME----------------AYKI 302
LP T + I C G A I+++ S ++ Y
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
LL K + + + M G + VY+ +I GLC +G+L+ A V E G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 363 FCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
F + YS LI++ + A K+ K+ LEN+
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKM-----LENS 739
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 170/422 (40%), Gaps = 38/422 (9%)
Query: 19 GSYRVIVKALGRRKFFSFMMG----------------------VLRDMRVNGVEADLLML 56
GS+ + ++ LGR K F F + R+M + + D L
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG 116
S + G +A+ + N + DT L+ LCE S A N M+
Sbjct: 274 RCFAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGLCEASLFEEAMDFLNRMRA 330
Query: 117 KVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
NV TY+ + G + +RV+ M +G P F + +G
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVND------FDECMKYYNEMLSNDC---EPN 226
A+++ M + P VYN +I + D D K Y+EML+ + N
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ ++TR + + + K A + EM+ G +P T T + + +LC+ A ++++
Sbjct: 451 VSSFTRCLCSAGKYEK---AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ +R G + Y I++ K G + EM+E G + +V Y +I
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYW 406
++ A + E L +G P+ + YS LI+ + E+A ++F ++ ++ + + Y+
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYF 627
Query: 407 RS 408
+
Sbjct: 628 KQ 629
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 40/271 (14%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V +M +G A L S ++D + + A +V + E + ++ LC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 100 ERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ A + M+ K NV TY A+ G+ G+ +++ M + GVAP+
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ V ++ + G +D A + MK+ + TA Y +I F +F E + +E+
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEI 873
Query: 219 LSNDCEPNLD-------------------------------------TYTRIITALLRRR 241
+D P L TY +I +L
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
KV A Q+F EM + GV+P + IK L
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 96/215 (44%), Gaps = 5/215 (2%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+++ M G + +++ + ++D F G + +++ + G+ + VL+ C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 100 ERSHVGAASSVFNSMKGKV-AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + A ++ MK + A Y V G++K F E ++ E+ D AP +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLS 883
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ--PDTAVYNAMIFNFISVNDFDECMKYYN 216
+ + ++ L +A R++ A + + + ++ YN++I + N + + ++
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
EM P + ++ +I L R K+ +AL + D
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 165/389 (42%), Gaps = 4/389 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
WA +Y + V LG+ K + M + MR + + L ++ ++ F
Sbjct: 107 ILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRF 165
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA 123
AG +A+ +F L E G+ ++TE++N+LL LC+ V A V +K + N
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH 225
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
T+N GW K R E ++EM+ G P ++ + + + +E+ M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ P++ Y ++ + + +F+E ++ M + C+P+ Y +I L R ++
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 244 VDALQMFD-EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG-CTISMEAYK 301
+A ++F EM GV T T I C + A+ + K+ S C + Y+
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGY-SSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
LL K G + + +EM + S D Y ++I LC E A + EE +
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKL 389
+ P L+ ++ N E A ++
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 165/389 (42%), Gaps = 4/389 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
WA +Y + V LG+ K + M + MR + + L ++ ++ F
Sbjct: 107 ILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRF 165
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA 123
AG +A+ +F L E G+ ++TE++N+LL LC+ V A V +K + N
Sbjct: 166 AGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH 225
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
T+N GW K R E ++EM+ G P ++ + + + +E+ M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ P++ Y ++ + + +F+E ++ M + C+P+ Y +I L R ++
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 244 VDALQMFD-EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG-CTISMEAYK 301
+A ++F EM GV T T I C + A+ + K+ S C + Y+
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGY-SSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
LL K G + + +EM + S D Y ++I LC E A + EE +
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKL 389
+ P L+ ++ N E A ++
Sbjct: 466 QDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ + GR + M V M+ G E D + ++D +AG + A+ ++ +
Sbjct: 396 TYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRM 455
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRF 138
E G++ DT +V++ CL + H+ AA +F M G+ N+ T+N + +K +
Sbjct: 456 QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNY 515
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
++ ++M+ G PD T+ + +E LG G ++EA VF M+ +N PD VY +
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ + + D+ ++Y ML PN+ T +++ LR ++ +A + ML G+
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Query: 259 LPPTGTITCFI 269
P T T +
Sbjct: 636 HPSLQTYTLLL 646
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%)
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
G D T+ + LGRA + E ++ M C+P+T YN +I ++ N E
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 212 MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
M +N+M CEP+ TY +I + + A+ M+ M G+ P T T + I
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 272 LCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
L G AA ++ + GCT ++ + I++ +K T L ++ +MQ G+ D
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 332 VEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFL 391
Y ++ L + G LE A V E K + P VY L++ + N ++A++ +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 392 KIKHA 396
+ A
Sbjct: 594 AMLQA 598
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 127/339 (37%), Gaps = 40/339 (11%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFG 136
L+ G D N +LK + + A F +K + F + TY + G +
Sbjct: 317 LHNFGFRMDAYQANQVLK---QMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 373
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+F EI +++ EM DG P+ T+ + GRA + EA VF M+E C+PD Y
Sbjct: 374 QFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYC 433
Query: 197 AMIFNFISVNDFDECMKYYN-----------------------------------EMLSN 221
+I D M Y EM+
Sbjct: 434 TLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ 493
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
C PNL T+ +I + R AL+++ +M G P T + ++ L G A
Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
++ + +R Y +L+ K G ++ M + G +V ++S
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
+ ++ A +++ L G PS Y+ L++ D+
Sbjct: 614 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 652
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 155/358 (43%), Gaps = 7/358 (1%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y ++++ R + + R M + G + + ++ S V++G + + V+ L
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSVWSFLK 222
Query: 81 ELGMNR---DTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFG 136
E+ + D N+L+ LC +S + M K A + TYN V + K G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
RF ++ M++ GV D T+ + + L R+ R+ + + + M++R P+ YN
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I F + + NEMLS PN T+ +I + +AL+MF M
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G+ P + + LC A Y + +R+G + Y ++ L K G
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
+ + EM + G D+ Y +I+G C +G+ + A ++ G P+ ++YS LI
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 169/389 (43%), Gaps = 2/389 (0%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
+F +K P D+ ++ +++ L F +++ M +G ++ + V+
Sbjct: 219 SFLKEMLKRKICP-DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-N 121
+ + G AI++ ++ G++ D N+L+ LC + + + M+ ++ N
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
TYN + G+S G+ +++ EM + G++P+ TF ++G G EA ++F
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M+ + P Y ++ +FD +Y M N TYT +I L +
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
+ +A+ + +EM + G+ P T + I C G A I + R G + + Y
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
L+ ++G + I+E M G++ D + +++ LC G++ A M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 362 GFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G P+ + + LIN +S +A+ +F
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 157/393 (39%), Gaps = 19/393 (4%)
Query: 2 VTFFNWAVKHPALPED--IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLL----- 54
+ F W VK P L D + + L R + + +L+++ + ++ +
Sbjct: 94 LKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALM 153
Query: 55 -----------MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
+ I++ ++R G + ++++F + G N N +L + +
Sbjct: 154 TTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE 213
Query: 104 VGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+ S M K K+ +VAT+N + G F + +M++ME G AP T+
Sbjct: 214 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
L + GR A E+ MK + D YN +I + N + +M
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
PN TY +I KV+ A Q+ +EML G+ P T I S G AL
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
++ G T S +Y +LL L K + + M+ G Y +I GL
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
C G L+ AV+++ E G P + YS LIN
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 486
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 156/378 (41%), Gaps = 37/378 (9%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L +M G+ + + + ++D + G+ +A+++F + G+ + VLL LC
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 100 ERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + A + MK V TY + G K G +E ++ EM DG+ PD
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ + G + GR A E+ C + P+ +Y+ +I+N + E ++ Y M
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ + T+ ++T+L + KV +A + M G+LP T + C I + G
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 279 FAALVIYKKARRSG-----------------------------------CTISMEAYKIL 303
A ++ + + G + Y L
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG- 362
L + K G ++++ EM + D Y +ISGLC G+ A+L +EA +G
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 363 FCPSRLVYSKLINKLLDS 380
P++++Y+ ++ + +
Sbjct: 720 VLPNKVMYTCFVDGMFKA 737
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 160/381 (41%), Gaps = 4/381 (1%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
I +Y ++ ++ F + +L M+ GV+AD+ ++++ R+ ++K +
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFG 136
++ + ++ + N L+ V AS + N M ++ N T+NA+ G G
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
F E ++ MEA G+ P ++GV L+GL + D A + MK Y
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
MI DE + NEM + +P++ TY+ +I + + A ++ + R
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 257 GVLPPTGTI-TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G L P G I + I + C G A+ IY+ G T + +L+ L K GK
Sbjct: 508 G-LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
M G + ++ +I+G N G+ A V +E G P+ Y L+
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 376 KLLDSNNAERAYKLFLKIKHA 396
L + A K FLK HA
Sbjct: 627 GLCKGGHLREAEK-FLKSLHA 646
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 40/376 (10%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
++ + GH+ +A + +L+ + DT N LL +C+ ++ A S+F M +
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG-VAPDCTTFGVFLEGLGRAGRMDEA 176
+ + TY ++ G + G+ KE EA G V P+ + F++G+ +AG+
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 743
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
M PD NAMI + + ++ EM + + PNL TY ++
Sbjct: 744 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 803
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
+R+ V + ++ ++ +G+LP T + +C L I K G +
Sbjct: 804 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 863
Query: 297 MEAYKILLMR----------------LSKLG------KCGTLLNIW-------------E 321
+ +L+ + ++ LG C ++++
Sbjct: 864 RYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 923
Query: 322 EMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSN 381
EM + G S + Y +I+GLC +G ++ A +V EE + CP + S ++ L
Sbjct: 924 EMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG 983
Query: 382 NAERA---YKLFLKIK 394
A+ A + LK+K
Sbjct: 984 KADEATLLLRFMLKMK 999
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 136/355 (38%), Gaps = 9/355 (2%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G D++ + ++D + R G + K + + + N+LL +R V +
Sbjct: 754 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 108 SSVFNS--MKGKVAFNVATYNAVAGGWSKFGRFNEIE---RVMKEMEADGVAPDCTTFGV 162
++ S + G + + ++ V G N +E +++K GV D TF +
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLG----ICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
+ G ++ AF++ M D +AM+ + F E +EM
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
P Y +I L R + A + +EM+ H + PP + ++ L G A
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
++ + + ++ ++ L+ K G L + M G D+ Y +I+GL
Sbjct: 990 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
C G + A + EE GF + Y LI LL A + LK AR
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLAR 1104
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 142/353 (40%), Gaps = 39/353 (11%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y +++ +RK S + R + +NG+ D L +V + + +++
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKF 135
G+ D N+L+ C + A + M ++ + T +A+ ++
Sbjct: 853 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
RF E V+ EM G++P+ + + GL R G + AF V KE
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV----KE---------- 958
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSND-CEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
EM+++ C PN+ + ++ AL + K +A + ML
Sbjct: 959 ---------------------EMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFML 996
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+ ++P + T + C G AL + G + + +Y +L+ L G
Sbjct: 997 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1056
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISG-LCNIGQLENAVLVMEEALHKGFCPS 366
++EEM+ G+ ++ Y+ +I G L A +++++ L +GF S
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITS 1109
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 36/302 (11%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W + P D +Y +V LGR K F + +L +M +G + + + + ++ S+
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 64 VRAGHVSKAIQVFGNLNELG-----------------------------------MNRDT 88
RA ++++A+ VF + E G ++ DT
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 89 EALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKE 147
+V++ CL + H+ AA +F M + N+ TYN + +K + ++ ++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
M+ G PD T+ + +E LG G ++EA VF M+++N PD VY ++ + +
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
++ ++Y ML PN+ T +++ LR K+ +A ++ ML G+ P T T
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Query: 268 FI 269
+
Sbjct: 650 LL 651
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFG 136
L LG+ D N +LK + + G A F +K + F + TY + G +
Sbjct: 322 LQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+F I +++ EM DG P+ T+ + GRA ++EA VF M+E C+PD Y
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYC 438
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I D M Y M + P+ TY+ II L + + A ++F EM+
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
GCT ++ Y I++ +K
Sbjct: 499 -----------------------------------GCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
L ++ +MQ G+ D Y ++ L + G LE A V E K + P VY L++
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 377 LLDSNNAERAYKLFLKIKHA 396
+ N E+A++ + + HA
Sbjct: 584 WGKAGNVEKAWQWYQAMLHA 603
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 140/350 (40%), Gaps = 11/350 (3%)
Query: 40 VLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL--------NELGMNRDTEA 90
VLR R E L L + +D++ +A V K + +GN + G D
Sbjct: 308 VLRRFRWGPAAEEALQNLGLRIDAY-QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHT 366
Query: 91 LNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
++ L GA + + + M + N TYN + + + NE V +M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
G PD T+ ++ +AG +D A +++ M+ PDT Y+ +I
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
K + EM+ C PNL TY ++ + R +AL+++ +M G P T + +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
+ L G A ++ + ++ Y +L+ K G ++ M G
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
+V ++S + ++ A +++ L G PS Y+ L++ D
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 36/302 (11%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W + P D +Y +V LGR K F + +L +M +G + + + + ++ S+
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 64 VRAGHVSKAIQVFGNLNELG-----------------------------------MNRDT 88
RA ++++A+ VF + E G ++ DT
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 89 EALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKE 147
+V++ CL + H+ AA +F M + N+ TYN + +K + ++ ++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
M+ G PD T+ + +E LG G ++EA VF M+++N PD VY ++ + +
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
++ ++Y ML PN+ T +++ LR K+ +A ++ ML G+ P T T
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Query: 268 FI 269
+
Sbjct: 650 LL 651
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFG 136
L LG+ D N +LK + + G A F +K + F + TY + G +
Sbjct: 322 LQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+F I +++ EM DG P+ T+ + GRA ++EA VF M+E C+PD Y
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYC 438
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I D M Y M + P+ TY+ II L + + A ++F EM+
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
GCT ++ Y I++ +K
Sbjct: 499 -----------------------------------GCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
L ++ +MQ G+ D Y ++ L + G LE A V E K + P VY L++
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 377 LLDSNNAERAYKLFLKIKHA 396
+ N E+A++ + + HA
Sbjct: 584 WGKAGNVEKAWQWYQAMLHA 603
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 140/350 (40%), Gaps = 11/350 (3%)
Query: 40 VLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL--------NELGMNRDTEA 90
VLR R E L L + +D++ +A V K + +GN + G D
Sbjct: 308 VLRRFRWGPAAEEALQNLGLRIDAY-QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHT 366
Query: 91 LNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
++ L GA + + + M + N TYN + + + NE V +M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
G PD T+ ++ +AG +D A +++ M+ PDT Y+ +I
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
K + EM+ C PNL TY ++ + R +AL+++ +M G P T + +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
+ L G A ++ + ++ Y +L+ K G ++ M G
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
+V ++S + ++ A +++ L G PS Y+ L++ D
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 36/302 (11%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W + P D +Y +V LGR K F + +L +M +G + + + + ++ S+
Sbjct: 350 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 64 VRAGHVSKAIQVFGNLNELG-----------------------------------MNRDT 88
RA ++++A+ VF + E G ++ DT
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 89 EALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKE 147
+V++ CL + H+ AA +F M + N+ TYN + +K + ++ ++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
M+ G PD T+ + +E LG G ++EA VF M+++N PD VY ++ + +
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN 589
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
++ ++Y ML PN+ T +++ LR K+ +A ++ ML G+ P T T
Sbjct: 590 VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Query: 268 FI 269
+
Sbjct: 650 LL 651
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFG 136
L LG+ D N +LK + + G A F +K + F + TY + G +
Sbjct: 322 LQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+F I +++ EM DG P+ T+ + GRA ++EA VF M+E C+PD Y
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYC 438
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I D M Y M + P+ TY+ II L + + A ++F EM+
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
GCT ++ Y I++ +K
Sbjct: 499 -----------------------------------GCTPNLVTYNIMMDLHAKARNYQNA 523
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
L ++ +MQ G+ D Y ++ L + G LE A V E K + P VY L++
Sbjct: 524 LKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 377 LLDSNNAERAYKLFLKIKHA 396
+ N E+A++ + + HA
Sbjct: 584 WGKAGNVEKAWQWYQAMLHA 603
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 140/350 (40%), Gaps = 11/350 (3%)
Query: 40 VLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL--------NELGMNRDTEA 90
VLR R E L L + +D++ +A V K + +GN + G D
Sbjct: 308 VLRRFRWGPAAEEALQNLGLRIDAY-QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHT 366
Query: 91 LNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
++ L GA + + + M + N TYN + + + NE V +M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
G PD T+ ++ +AG +D A +++ M+ PDT Y+ +I
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
K + EM+ C PNL TY ++ + R +AL+++ +M G P T + +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
+ L G A ++ + ++ Y +L+ K G ++ M G
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
+V ++S + ++ A +++ L G PS Y+ L++ D
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 174/445 (39%), Gaps = 61/445 (13%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMR--------------VNG 48
+FF W P+ + S ++ L + K F +L + V G
Sbjct: 65 SFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGG 124
Query: 49 VEADLLMLSIVVD----SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHV 104
V D +S V + +AG ++ +I VF + G+ +A VLL L ++
Sbjct: 125 VSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLT 184
Query: 105 GAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD------------ 151
+F M K V N+ YN + SK G + E+++ EME
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 152 -----------------------GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
GVAP+ T+ F+ G R GRM EA +F +K+ +
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DV 303
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQ 248
+ Y +I + +ND DE ++ M S P + TY I+ L ++ +A +
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 249 MFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLS 308
+ EM + P T I C +A+ + KK SG + M +YK L+
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 309 KLGKCGTLLNIWEE---MQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
K+ + L N EE M E G+S Y +++ G N + + ++EE +G C
Sbjct: 424 KVLE---LENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 366 SRLVYSKLINKLLDSNNAERAYKLF 390
+Y LI ++ + A LF
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLF 505
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 164/402 (40%), Gaps = 37/402 (9%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V +R G++ L +++++S V+ ++F + +LG+ + NVL+
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 100 ERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ A + + M+ K F ++ TYN + + K E V ME GVAP+
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIV 274
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ F+ G R GRM EA +F +K+ + + Y +I + +ND DE ++ M
Sbjct: 275 TYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVM 333
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
S P + TY I+ L ++ +A ++ EM + P T I C
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDM 393
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKL---------------------------- 310
+A+ + KK SG + M +YK L+ K+
Sbjct: 394 VSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 311 -------GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
K + + EE ++ G +DV +Y +I +C + Q++ A ++ E KG
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
++++ + + A LF + + R + N + Y
Sbjct: 514 VGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%)
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+S D E ++ ++ + + D++ +F+++ G+ P T + L
Sbjct: 125 VSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLT 184
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
I+KK + G ++ Y +L+ SK G + EM+E G D+ Y +
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
IS C A+ V + G P+ + Y+ I+ A +LF +IK
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 172/400 (43%), Gaps = 9/400 (2%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P + + ++ LGR S M ++ M + D++ L I++++ ++ V +A++
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 75 VF----GNLNELG--MNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFNVATYN 126
VF G + G + D+ N L+ LC+ + A + MK + A N TYN
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYN 410
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ G+ + G+ + V+ M+ D + P+ T + G+ R ++ A F M++
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
+ + Y +I SV++ ++ M +Y +ML C P+ Y +I+ L + R+ DA
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+++ +++ G I C + + G Y L+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV-LVMEEALHKGFCP 365
K ++ + E+M+E G V Y +I C++G+L+ A+ L + LH P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 366 SRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ ++Y+ LIN N +A L ++K N Y
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 146/331 (44%), Gaps = 14/331 (4%)
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS-MKGKVAFNVATYNAVA 129
K I + + G++ ++ L + LC+ + AA + + MK K +NA+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNAL- 300
Query: 130 GGWSKFGRFNEIER---VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
S GR +I R ++ +M+ + PD T G+ + L ++ R+DEA EVF M+ +
Sbjct: 301 --LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK 358
Query: 187 NC------QPDTAVYNAMIFNFISVNDFDECMKYYNEM-LSNDCEPNLDTYTRIITALLR 239
+ D+ +N +I V E + M L C PN TY +I R
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCR 418
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
K+ A ++ M + P T+ + +C + A+V + + G ++
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ + + +E+M E G S D ++Y +ISGLC + + +A+ V+E+
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
GF L Y+ LI D NN E+ Y++
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 145/337 (43%), Gaps = 8/337 (2%)
Query: 47 NGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGA 106
+GV + + L+ + S + + A + +L + + N LL CL +
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 107 ASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA----DG--VAPDCTT 159
+ + M + K+ +V T + K R +E V ++M DG + D
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH 372
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMK-ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
F ++GL + GR+ EA E+ MK E C P+ YN +I + + + + M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
++ +PN+ T I+ + R + A+ F +M + GV T I CS
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
A+ Y+K +GC+ + Y L+ L ++ + + + E+++EGG+S D+ Y +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
I C+ E ++ + +G P + Y+ LI+
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 142/349 (40%), Gaps = 2/349 (0%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
++D + RAG + A +V + E + + +N ++ +C + A F M K
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
V NV TY + + ++M G +PD + + GL + R +A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
V +KE D YN +I F N+ ++ + +M +P+ TY +I+
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK-ARRSGCTIS 296
+ + +M ++M G+ P T I CS G AL ++K S +
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
Y IL+ SKLG G L++ EEM+ +VE Y + L Q E + +M+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 357 EALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
E + + P+++ L+ +L S+ + K A E A +
Sbjct: 712 EMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASPF 760
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 39/302 (12%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + ++ + IV + R + + DM GV+ +++ ++ + +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 69 VSK-----------------------------------AIQVFGNLNELGMNRDTEALNV 93
V K AI+V L E G + D A N+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 94 LLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD 151
L+ C++++ + M +GK ++ TYN + + K F +ER+M++M D
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSI-TYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK-ERNCQPDTAVYNAMIFNFISVNDFDE 210
G+ P TT+G ++ G +DEA ++F M P+T +YN +I F + +F +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIK 270
+ EM PN++TY + L + + L++ DEM+ P T+ ++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Query: 271 HL 272
L
Sbjct: 731 RL 732
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 149/367 (40%), Gaps = 24/367 (6%)
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG 116
++++ F R G V++++ V+ L+ ++++ NV++ L V A V + M
Sbjct: 156 NLLIRWFGRMGMVNQSVLVYERLD--SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQ 213
Query: 117 KVAF---NVATYNAVAGGWSKFGRFNEIERVM---KEMEADGVAPDCTTFGVFLEGLGRA 170
K + N T + V K GR E+++ + GV+P+ F+ L +
Sbjct: 214 KESVFPPNRITADIVLHEVWK-GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 272
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
R + A+++ + + + +NA++ D +M P++ T
Sbjct: 273 ARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 332
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI--------TCFIKHLCSYGPPFAA- 281
+I L + R+V +AL++F++M G G + I LC G A
Sbjct: 333 GILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 282 --LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
LV K R C + Y L+ + GK T + M+E +V I+
Sbjct: 391 ELLVRMKLEER--CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Query: 340 SGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSL 399
G+C L AV+ + +G + + Y LI+ +N E+A + K+ A
Sbjct: 449 GGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCS 508
Query: 400 ENARNYW 406
+A+ Y+
Sbjct: 509 PDAKIYY 515
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 38/412 (9%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
++ +++ A + MG L++M+ G+EADL++ + ++ F G + + +F +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRF 138
E G + N L++ C+ + AS +F M + V NV TY + G G+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E +++ M P+ T+ + + L + G + +A E+ MK+R +PD YN +
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 199 IFNFISVNDFDECMKYYNEMLSND--CEPNLDTYTRIITALLRRRKVVDALQMFD----- 251
+ + D DE K ML + +P++ +Y +I L + ++ AL ++D
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 252 --------------EMLRHG----------------VLPPTGTITCFIKHLCSYGPPFAA 281
L+ G ++ + T T I C G A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ K R S S+ Y LL L K G ++EEMQ DV + +I G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
G +++A ++ G P YSKLIN+ L + A F K+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 165/381 (43%), Gaps = 9/381 (2%)
Query: 30 RRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTE 89
R+ F+F GVL M G ++ +I++ R KA+ + + + D
Sbjct: 121 RKTGFAF--GVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178
Query: 90 ALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEM 148
+ N +++ CE + A + N MKG ++++ T+ + + K G+ +E +KEM
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 149 EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDF 208
+ G+ D + + G G +D +F + ER P YN +I F +
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 209 DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCF 268
E + + M+ PN+ TYT +I L K +ALQ+ + M+ P T
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL---SKLGKCGTLLNIWEEMQE 325
I LC G A+ I + ++ Y ILL L L + LL + +++
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM--LKD 416
Query: 326 GGYSS-DVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
Y+ DV Y +I GLC +L A+ + + + K R+ + L+N L + +
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 385 RAYKLFLKIKHARSLENARNY 405
+A +L+ +I ++ + N+ Y
Sbjct: 477 KAMELWKQISDSKIVRNSDTY 497
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 162/373 (43%), Gaps = 13/373 (3%)
Query: 24 IVKALGRRKFFSFMMGVLR-DMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL 82
+V++ FSF +L D +N V LS +++ +V+ A V + +
Sbjct: 82 LVRSRNHELAFSFYRKMLETDTFINFVS-----LSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEI 141
G + N+LLK LC G A S+ M + + +V +YN V G+ + +
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 142 ERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFN 201
+ EM+ G + T+G+ ++ +AG+MDEA MK + D VY ++I
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 202 FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
F + D ++E+L P TY +I + ++ +A ++F+ M+ GV P
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 262 TGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWE 321
T T I LC G AL + + Y I++ +L K G + I E
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 322 EMQEGGYSSDVEVYEYIISGLCNIGQLENA----VLVMEEALHKGFCPSRLVYSKLINKL 377
M++ D Y ++ GLC G L+ A L+++++ + P + Y+ LI+ L
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD--PDVISYNALIHGL 434
Query: 378 LDSNNAERAYKLF 390
N +A ++
Sbjct: 435 CKENRLHQALDIY 447
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 147/349 (42%), Gaps = 3/349 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
GV ++ + ++D G +A+Q+ + E + N+++ LC+ V A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG--VAPDCTTFGVFL 164
+ MK + + TYN + GG G +E +++ M D PD ++ +
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 165 EGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCE 224
GL + R+ +A +++ + E+ D N ++ + + D ++ M+ + ++ +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 225 PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVI 284
N DTYT +I + + A + +M + P C + LC G A +
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 285 YKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCN 344
+++ +R + ++ I++ K G + ++ M G S D+ Y +I+
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 345 IGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+G L+ A+ ++ + GF P + ++ + ++ +L K+
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 123/317 (38%), Gaps = 36/317 (11%)
Query: 90 ALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEM 148
+L+ LL+C + G A V M K AFNV +N + G + + +++EM
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 149 EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDF 208
+ + PD ++ + G +++A E+ MK C + +I F
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 209 DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCF 268
DE M + EM E +L YT +I ++ +FDE+L G P T
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
I+ C KLG+ I+E M E G
Sbjct: 289 IRGFC-----------------------------------KLGQLKEASEIFEFMIERGV 313
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
+V Y +I GLC +G+ + A+ ++ + K P+ + Y+ +INKL A +
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 389 LFLKIKHARSLENARNY 405
+ +K R+ + Y
Sbjct: 374 IVELMKKRRTRPDNITY 390
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/345 (18%), Positives = 153/345 (44%), Gaps = 4/345 (1%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
E + + +I+++ + G V+ A+++ + + D N+LL LC + + AS
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 110 VFNSMKGKVAF---NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ M ++ +V +YNA+ G K R ++ + + A D T + L
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+AG +++A E++ + + ++ Y AMI F + +M ++ +P+
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ Y ++++L + + A ++F+EM R P + I G +A +
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
R+G + + Y L+ R KLG ++ +++M + G+ D + + ++ + G
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSN-NAERAYKLF 390
+ + ++++ + K + + +++ + +S+ N + A +L
Sbjct: 649 ETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 160/359 (44%), Gaps = 1/359 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y I+ A +++ FS + GVL+ M+ +GV + + +++++ V+ G +S A ++F +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRF 138
E G+ D L+ C + ++ A +F+ + K ++ + TY A+ G K G
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E +M EM++ GV F ++G R G +DEA ++ M+++ Q D N +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
F + +DE ++ M+ + + +YT +I + V +A ++F EM GV
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T I C G A + +G Y L+ +
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
++ EM G + Y +ISGL G+ + A + +E KG+ VY+ LI +
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 155/394 (39%), Gaps = 16/394 (4%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F++ VK L D S V + A +R+ + + R M +GV+ + L+IVV+
Sbjct: 177 FDYMVKK-GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVA 123
R G V K+ ++ + G+ + N ++ ++ V MK V +N
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY + K G+ ++ E++ EM G+ D + + R G M AF +F +
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
E+ P + Y A+I V + NEM S + +I R+ V
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR-------SGCTIS 296
+A ++D M + G TC C F L Y +A++ G +S
Sbjct: 416 DEASMIYDVMEQKGF--QADVFTCNTIASC-----FNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
+Y L+ K G ++ EM G + Y +I C G+++ A +
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 357 EALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G P Y+ LI+ ++N + A +LF
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 38/335 (11%)
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN--SMKGKVAFNVATYNAVAG 130
+++F + + G+ +L ++++ LC R V + + S+KG + TYN +
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG-IKPEAYTYNTIIN 267
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
+ K F+ +E V+K M+ DGV + T+ + +E + G+M +A ++F M+ER +
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D V YT +I+ R+ + A +F
Sbjct: 328 DVHV-----------------------------------YTSLISWNCRKGNMKRAFLLF 352
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
DE+ G+ P + T I +C G AA ++ + + G I+ + L+ +
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
G I++ M++ G+ +DV I S + + + A + + G S + Y
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ LI+ N E A +LF+++ NA Y
Sbjct: 473 TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 153/346 (44%), Gaps = 2/346 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKF-FSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
+K+ + I +Y ++ A R + ++G+ +MR G++ D++ + ++ + G
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 68 HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYN 126
+A VF +N+ G+ D + L++ + + + M G ++ +YN
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ ++K G E V +M+A G P+ T+ V L G++GR D+ ++F MK
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
N PD A YN +I F F E + +++M+ + EP+++TY II A + DA
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
++ M + ++P + T I+ ALV + G S+E + LL
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
++ G I + + G + + + I G+ E AV
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 137/333 (41%), Gaps = 1/333 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++H + DI +Y ++ A R V R M G+ DL S +V++F +
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNA 127
+ K + G + G D + NVLL+ + + A VF+ M+ N TY+
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ + + GR++++ ++ EM++ PD T+ + +E G G E +F M E N
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
+PD Y +IF ++ K M +ND P+ YT +I A + +AL
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
F+ M G P T + G + I + SG + + + +
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIIS 340
+ GK + + +M++ D E ++S
Sbjct: 538 KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 128/322 (39%), Gaps = 3/322 (0%)
Query: 56 LSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEAL-NVLLKCLCERSHVGAASSVFNSM 114
++V F G +++++F + + E + +++ L + VF+ M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 115 KGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+ V+ +V +Y A+ + + GR+ ++ M+ + ++P T+ + R G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 174 DEAF-EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
E +F M+ QPD YN ++ DE + M P+L TY+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
++ + R++ + EM G LP + ++ G A+ ++ + + +G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
CT + Y +LL + G+ + ++ EM+ D Y +I G + V
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 353 LVMEEALHKGFCPSRLVYSKLI 374
+ + + + P Y +I
Sbjct: 408 TLFHDMVEENIEPDMETYEGII 429
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 130/321 (40%), Gaps = 7/321 (2%)
Query: 87 DTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
D E+L L L R + +F K K++ N + V ++ G + R+ K
Sbjct: 75 DVESLINKLSSLPPRGSIARCLDIF---KNKLSLN--DFALVFKEFAGRGDWQRSLRLFK 129
Query: 147 EMEAD-GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISV 205
M+ P+ + + + LGR G +D+ EVF M + Y A+I +
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL-QMFDEMLRHGVLPPTGT 264
++ ++ + M + P++ TY +I A R + L +F EM G+ P T
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
+ G A ++++ G + Y L+ KL + + ++ EM
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
GG D+ Y ++ G ++ A+ V + G P+ YS L+N S +
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 385 RAYKLFLKIKHARSLENARNY 405
+LFL++K + + +A Y
Sbjct: 370 DVRQLFLEMKSSNTDPDAATY 390
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 146/360 (40%), Gaps = 37/360 (10%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y ++++ G +F ++ + DM +E D+ ++ + + G A ++
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN--VATYNAVAGGWSK 134
+ + ++A +++ + + A FN+M +V N + T++++ +++
Sbjct: 446 QYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH-EVGSNPSIETFHSLLYSFAR 504
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G E E ++ + G+ + TF +E + G+ +EA + + M++ C PD
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
A++ + DEC + + EM ++D P++ Y ++ + + D ++ +EML
Sbjct: 565 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+ V I IK G ++I+ L KL G
Sbjct: 625 SNRVSNIHQVIGQMIK---------------------GDYDDDSNWQIVEYVLDKLNSEG 663
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
L I Y ++ L +GQ E A V+ EA +G P +KL+
Sbjct: 664 CGLGI-------------RFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 8/330 (2%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
++ FF+W+ K + +++ L +K + M +L D+R D SIV
Sbjct: 86 LLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVA 145
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
++ V+ G AI +F L++ +D + ++ LC R HV A V + K ++
Sbjct: 146 ETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISG 205
Query: 121 N-VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGL-------GRAGR 172
N ++ Y ++ GWS E RV+++M++ G+ PD F L L +G
Sbjct: 206 NELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGL 265
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+ EA + M+ QP + YN ++ E + +M + C+P+ +Y
Sbjct: 266 VPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYF 325
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
++ L + Q+ DEM+ G P I LC AL +++K +RS
Sbjct: 326 VVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSS 385
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEE 322
+ Y +L+ +L K G +WEE
Sbjct: 386 VGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
++ ++ + A D TF + E L + G+ ++A +F + + +C D A+I
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 204 SVNDFDEC---MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
S M ++ +++S + L Y ++ +R V +A ++ +M G+ P
Sbjct: 185 SRGHVKRALGVMHHHKDVISGN---ELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 241
Query: 261 P----TGTITCFIKHLCSYGPP---FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
+TC + + P AL I + R + +Y ILL L + +
Sbjct: 242 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 301
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
I E+M+ G D Y +++ L G+ +++E + +GF P R Y L
Sbjct: 302 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDL 361
Query: 374 INKLLDSNNAERAYKLFLKIKHA 396
I L A +LF K+K +
Sbjct: 362 IGVLCGVERVNFALQLFEKMKRS 384
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 17/268 (6%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMR--VNGVEADLLMLSIVVDSFVRAGHVSKA 72
P+D + I+ AL R +GV+ + ++G E + + S R +V +A
Sbjct: 170 PQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQR--NVKEA 227
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERS-------HVGAASSVFNSMKG-KVAFNVAT 124
+V ++ G+ D N LL CLCER+ V A ++ M+ K+ +
Sbjct: 228 RRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMS 287
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
YN + + R E +++++M+ G PD ++ + L GR + ++ M
Sbjct: 288 YNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMI 347
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
ER +P+ Y +I V + ++ + +M + Y +I L +
Sbjct: 348 ERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFE 407
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHL 272
++++E L V T++C I L
Sbjct: 408 KGRELWEEALSIDV-----TLSCSISLL 430
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 151/335 (45%), Gaps = 47/335 (14%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN--V 122
R GH A Q+ ++ G + +L++ + V+ MK K F V
Sbjct: 170 RNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK-KFGFKPRV 228
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
YN + K G F+ V ++ + DG+ + TTF + ++GL +AGR++E E+
Sbjct: 229 FLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQR 288
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M+E C+PD Y AMI +S + D ++ ++EM ++ +P++ Y ++ L + +
Sbjct: 289 MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
V ++F EM +L I E Y++
Sbjct: 349 VERGYELFMEMKGKQIL-----------------------------------IDREIYRV 373
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV----LVMEEA 358
L+ GK + N+WE++ + GY +D+ +Y +I GLC++ Q++ A + +EE
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 359 LHKGF---CPSRLVYSKLINKLLD-SNNAERAYKL 389
L F P + Y ++N+L D SN ER +L
Sbjct: 434 LEPDFETLSPIMVAYV-VMNRLSDFSNVLERIGEL 467
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 177/429 (41%), Gaps = 36/429 (8%)
Query: 10 KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
K L E+ ++ ++VK L + M+ +L+ MR N + D+ + ++ + V G++
Sbjct: 255 KEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNL 314
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAV 128
+++V+ + + D A L+ LC+ V +F MKGK + + Y +
Sbjct: 315 DASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVL 374
Query: 129 AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
G+ G+ + +++ G D + ++GL ++D+A+++F E
Sbjct: 375 IEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Query: 189 QPDTAVYNAMIFNFISVN---DFDECMKYYNE--------------MLSNDCEPN----- 226
+PD + ++ ++ +N DF ++ E +L D E N
Sbjct: 435 EPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALD 494
Query: 227 ------------LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+ Y ++ AL + + +L +F EM + G P + + + I
Sbjct: 495 VFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVE 554
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
G AA ++K C S+ AY L L ++G+ ++ + E S +E
Sbjct: 555 KGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEF 614
Query: 335 -YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
Y + +C E + V++E +G + ++Y +I+ + + A ++F ++
Sbjct: 615 KYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Query: 394 KHARSLENA 402
K + + A
Sbjct: 675 KKRKVMTEA 683
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ A YNA A ++ G F +++ + M++ G P F + + R + V+
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
MK+ +P +YN ++ + FD + Y + + T+ ++ L +
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
++ + L++ M + P T IK L S G A+L ++ + RR + AY
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
L++ L K G+ ++ EM+ D E+Y +I G G++ +A + E+ +
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G+ +Y+ +I L N ++AYKLF
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%)
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
K++ + D A YNA + F + M S P+ + +I R+
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+ ++++M + G P + L G AL +Y+ + G + IL
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ L K G+ +L I + M+E DV Y +I L + G L+ ++ V +E
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
P + Y L+ L ER Y+LF+++K + L + Y
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIY 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/363 (16%), Positives = 146/363 (40%), Gaps = 42/363 (11%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y +V L + + +M+ + D + ++++ FV G V A ++
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN-SMKGKVAFNVATYNAVAGGWSKF 135
+L + G D N ++K LC + V A +F +++ ++ + T + + +
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVM 451
Query: 136 GRFNEIERVMKEM----------------------EADGVAPDC------------TTFG 161
R ++ V++ + E + +A D + +
Sbjct: 452 NRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYN 511
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ +E L + G + ++ +F M++ +PD++ Y+ I F+ D ++ +++
Sbjct: 512 ILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEM 571
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEML---RHGVLPPTGTITCFIKHLCSYGPP 278
C P++ Y + L + ++ + + E L G + +T + H+C
Sbjct: 572 SCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALT--VCHVCKGSNA 629
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY--SSDVEVYE 336
+ + + + G I+ Y ++ +SK G ++ E+++ +D+ VYE
Sbjct: 630 EKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYE 689
Query: 337 YII 339
++
Sbjct: 690 EML 692
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 171/400 (42%), Gaps = 9/400 (2%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P + + ++ LGR S M ++ M + D++ L I++++ ++ V +A++
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 75 VF----GNLNELG--MNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFNVATYN 126
VF G + G + D+ N L+ LC+ + A + MK + N TYN
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ G+ + G+ + V+ M+ D + P+ T + G+ R ++ A F M++
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
+ + Y +I SV++ ++ M +Y +ML C P+ Y +I+ L + R+ DA
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+++ +++ G I C + + G Y L+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV-LVMEEALHKGFCP 365
K ++ + E+M+E G V Y +I C++G+L+ A+ L + LH P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 366 SRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ ++Y+ LIN N +A L ++K N Y
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFN 121
VR H AI+V L E G + D A N+L+ C++++ + M+ GK +
Sbjct: 524 VRRDH--DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
+ TYN + + K F +ER+M++M DG+ P TT+G ++ G +DEA ++F
Sbjct: 582 I-TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK 640
Query: 182 SMK-ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M P+T +YN +I F + +F + + EM PN++TY + L +
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 241 RKVVDALQMFDEMLRHGV 258
+ L++ DEM+ H V
Sbjct: 701 TQGETLLKLMDEMVEHLV 718
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 2/304 (0%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
++D + RAG + A +V + E + + +N ++ +C + A F M K
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
V NV TY + + ++M G +PD + + GL + R +A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
V +KE D YN +I F N+ ++ + +M +P+ TY +I+
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK-ARRSGCTIS 296
+ + +M ++M G+ P T I CS G AL ++K S +
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
Y IL+ SKLG G L++ EEM+ +VE Y + L Q E + +M+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 357 EALH 360
E +
Sbjct: 712 EMVE 715
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 143/360 (39%), Gaps = 22/360 (6%)
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-- 120
F R G V++++ V+ L+ ++++ NV++ L V A V + M K +
Sbjct: 162 FGRMGMVNQSVLVYERLD--SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP 219
Query: 121 -NVATYNAVAGGWSKFGRFNE--IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
N T + V K E I ++ + GV+P+ F+ L + R + A+
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
++ + + + +NA++ D +M P++ T +I L
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTI--------TCFIKHLCSYGPPFAA---LVIYK 286
+ R+V +AL++F++M G G + I LC G A LV K
Sbjct: 340 CKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
R C + Y L+ + GK T + M+E +V I+ G+C
Sbjct: 398 LEER--CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYW 406
L AV+ + +G + + Y LI+ +N E+A + K+ A +A+ Y+
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 29/405 (7%)
Query: 19 GSYRVIVKALGRR------KFFSFMM------GVLRD-------MRVNGVEADLLMLSIV 59
GS RV+V + RR + FS +M G LRD M+ GVE +LL+ +
Sbjct: 225 GSRRVLV-LMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTT 283
Query: 60 VDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVA 119
+D FVRA + KA++ + +G+ + N +++ C+ V A + M K
Sbjct: 284 IDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC 343
Query: 120 F-NVATYNAVAGGWSKFGRFNEIERVMKEMEAD-GVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ +Y + G K R E+ +MK+M + G+ PD T+ + L + DEA
Sbjct: 344 LPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEAL 403
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRIITA 236
+E+ + D Y+A++ E NEMLS C P++ TYT ++
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 463
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
R +V A ++ M HG P T + T + +C G A + + + +
Sbjct: 464 FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEM-QEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
Y +++ L + GK ++ EM +G + VE+ ++ LC G+ A M
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI-NLLLQSLCRDGRTHEARKFM 582
Query: 356 EEALHKGFCPSRLVYSKLINKLLDSNNAERAYK----LFLKIKHA 396
EE L+KG + + ++ +I+ ++ + A ++L KHA
Sbjct: 583 EECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 157/392 (40%), Gaps = 3/392 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ FF WA + D Y +++ L + K VL M+ G+ S V+
Sbjct: 191 LKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMV 250
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAF 120
S+ RAG + A++V + G+ + N + + + A M+ +
Sbjct: 251 SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVP 310
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV TYN + G+ R E ++++M + G PD ++ + L + R+ E ++
Sbjct: 311 NVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370
Query: 181 CSM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M KE PD YN +I + DE + + + + Y+ I+ AL +
Sbjct: 371 KKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430
Query: 240 RRKVVDALQMFDEMLRHGVLPP-TGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
++ +A + +EML G PP T T + C G A + + G +
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
+Y LL + + GK + +E +S + Y I+ GL G+L A V+ E
Sbjct: 491 SYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ KGF P + + L+ L A K
Sbjct: 551 VLKGFFPGPVEINLLLQSLCRDGRTHEARKFM 582
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 158/377 (41%), Gaps = 8/377 (2%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNG-VEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
Y IV AL + S ++ +M G D++ + VV+ F R G V KA ++ +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFN-SMKGKVAFNVATYNAVAGGWSKFGRF 138
+ G +T + LL +C A + N S + + N TY+ + G + G+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+E V++EM G P + L+ L R GR EA + + C + + +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I F ++ D + ++M + ++ TYT ++ L ++ ++ +A ++ +ML G+
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKK--ARRSGCTISMEAYKILLMRLSKLGKCGTL 316
P T I C G + I +K +R+ TI Y ++ +L LGK
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI----YNQVIEKLCVLGKLEEA 716
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ ++ SD + ++ G G +A V ++ P + KL +
Sbjct: 717 DTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKR 776
Query: 377 LLDSNNAERAYKLFLKI 393
L+ + A KL L++
Sbjct: 777 LVLKGKVDEADKLMLRL 793
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 149/337 (44%), Gaps = 37/337 (10%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG-------------VEA 51
F++A + P S+ +++ LGR ++F+ + VL R +G V A
Sbjct: 71 FDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYA 130
Query: 52 DLLMLSIVVDSFVRA-----------------------GHVSKAIQVFGNLNELGMNRDT 88
+ + V+ +F + G++ KA ++F + G+ +T
Sbjct: 131 EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 89 EALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKE 147
+ N+L++ C + A +F M + V +V +Y + G+ + G+ N ++ +
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
M G PD ++ L L R ++ EA+++ C MK + C PD YN MI F +
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
+ K ++MLSN C PN +Y +I L + + + +EM+ G P C
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 268 FIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
+K CS+G A + + ++G T+ + +++++
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
G + +AFE+F S + P+T YN ++ F +D + + +ML D P++D+Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
+I R+ +V A+++ D+ML G +P + T + LC A + + +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
GC + Y +++ + + + ++M G S + Y +I GLC+ G +
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 351 AVLVMEEALHKGFCP 365
+EE + KGF P
Sbjct: 349 GKKYLEEMISKGFSP 363
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 228 DTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY-GPPFAALVIYK 286
+ +T +I + L F +ML P + + L S+ G A ++K
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+R G + +Y +L+ ++ +M E DV+ Y+ +I G C G
Sbjct: 180 SSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG 239
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
Q+ A+ ++++ L+KGF P RL Y+ L+N L AYKL ++K
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 163/382 (42%), Gaps = 1/382 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ ++ +Y ++K ++ V ++ + AD M +++D + R G + A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGG 131
++V N+ E+G+ +T N L+ C+ + A +F+ M + + TYN + G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ + G +E ++ +M V P T+ + L+G R G + ++ M +R D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ ++ + DF+E MK + +L+ + T +I+ L + KV +A ++ D
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+ P T G A + + R G ++E Y L+ K
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ ++ E++ G + V Y +I+G CNIG ++ A E + KG + + S
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICS 650
Query: 372 KLINKLLDSNNAERAYKLFLKI 393
K+ N L + + A L KI
Sbjct: 651 KIANSLFRLDKIDEACLLLQKI 672
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 173/412 (41%), Gaps = 44/412 (10%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y +++K R F ++ + + M GV AD + S ++++ + G ++A++++ N+
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVF---NSMKGKVAFNVATYNAVAGGWSKFG 136
G+ DT LNV++ LC+ V A + N + K A V TY A++ G+ K G
Sbjct: 498 LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA--VQTYQALSHGYYKVG 555
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
E V + ME G+ P + + G + +++ ++ ++ R P A Y
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
A+I + ++ D+ EM+ N++ ++I +L R K+ +A + +++
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 257 GVLPP----------TGTITCF----------------------------IKHLCSYGPP 278
+L P TC I LC G
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKL 735
Query: 279 FAALVIYKKARRSGCTISME-AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A ++ S I E Y IL+ + G + +EM G ++ Y
Sbjct: 736 EDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
+I GLC +G ++ A ++ + KG P+ + Y+ LI+ L+ S N A +L
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 4/311 (1%)
Query: 49 VEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNE--LGMNRDTEALNVLLKCLCERSHVGA 106
V D+ SIVV+++ R+G+V KA+ VF E LG+ + N L+ V
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEG 279
Query: 107 ASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
+ V M + V+ NV TY ++ G+ K G E E V + ++ + D +GV ++
Sbjct: 280 MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
G R G++ +A V +M E + +T + N++I + E + ++ M +P
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ TY ++ R V +AL++ D+M + V+P T +K G L ++
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
K + G + LL L KLG + +WE + G +D +ISGLC +
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 346 GQLENAVLVME 356
++ A +++
Sbjct: 520 EKVNEAKEILD 530
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 155/353 (43%), Gaps = 2/353 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G+E +++ + +++ + G V +V ++E G++R+ L+K C++ + A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 108 SSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
VF +K K+ + Y + G+ + G+ + RV M GV + T + G
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
++G++ EA ++F M + + +PD YN ++ + DE +K ++M + P
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ TY ++ R D L ++ ML+ GV + + ++ L G A+ +++
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
G +++ L K+ K I + + V+ Y+ + G +G
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSL 399
L+ A V E KG P+ +Y+ LI+ + + L ++++ AR L
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR-ARGL 607
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 169/456 (37%), Gaps = 75/456 (16%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K L D Y V++ R + V +M GV + + + +++ + ++G
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNA 127
+ +A Q+F +N+ + D N L+ C +V A + + M + +V V TYN
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 128 VAGGWS-----------------------------------KFGRFNEIERVMKEMEADG 152
+ G+S K G FNE ++ + + A G
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+ D T V + GL + +++EA E+ ++ C+P Y A+ + V + E
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
M P ++ Y +I+ + R + + E+ G+ P T I
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGW 621
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKIL---LMRLSKLGKCGTLLN--IWEEMQEGG 327
C+ G A + G T+++ + L RL K+ + LL + ++ G
Sbjct: 622 CNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPG 681
Query: 328 YSSDVE---------------------------------VYEYIISGLCNIGQLENAVLV 354
Y S E VY I+GLC G+LE+A +
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKL 741
Query: 355 MEEALHKG-FCPSRLVYSKLINKLLDSNNAERAYKL 389
+ L F P Y+ LI+ + + +A+ L
Sbjct: 742 FSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
Query: 107 ASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEM-EADGVAPDCTTFGVFL 164
A SV NS K+ N YN G K G+ + ++ ++ +D PD T+ + +
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 165 EGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCE 224
G AG +++AF + M + P+ YNA+I + + D + +++
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 225 PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
PN TY +I L++ V +A+++ ++M+ G++
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 9/291 (3%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M G+ + M + ++ + H++K + L G+ L+ C
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 104 VGAA-SSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEM-EADGVAPDCTTFG 161
+ A ++ F ++ + NV + +A + + +E +++++ + D + P +
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 162 VFLEGLG----RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
FLE + ++ E+ E S ++ P+ VYN I ++ K +++
Sbjct: 687 EFLEASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSD 744
Query: 218 MLSND-CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
+LS+D P+ TYT +I + A + DEM G++P T IK LC G
Sbjct: 745 LLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
A + K + G T + Y L+ L K G + + E+M E G
Sbjct: 805 NVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 171/400 (42%), Gaps = 9/400 (2%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P + + ++ LGR S M ++ M + D++ L I++++ ++ V +A++
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 75 VF----GNLNELG--MNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFNVATYN 126
VF G + G + D+ N L+ LC+ + A + MK + N TYN
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ G+ + G+ + V+ M+ D + P+ T + G+ R ++ A F M++
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
+ + Y +I SV++ ++ M +Y +ML C P+ Y +I+ L + R+ DA
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+++ +++ G I C + + G Y L+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV-LVMEEALHKGFCP 365
K ++ + E+M+E G V Y +I C++G+L+ A+ L + LH P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 366 SRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ ++Y+ LIN N +A L ++K N Y
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 142/349 (40%), Gaps = 2/349 (0%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
++D + RAG + A +V + E + + +N ++ +C + A F M K
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
V NV TY + + ++M G +PD + + GL + R +A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
V +KE D YN +I F N+ ++ + +M +P+ TY +I+
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK-ARRSGCTIS 296
+ + +M ++M G+ P T I CS G AL ++K S +
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
Y IL+ SKLG G L++ EEM+ +VE Y + L Q E + +M+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 357 EALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
E + + P+++ L+ +L S+ + K A E A +
Sbjct: 712 EMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASPF 760
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 39/302 (12%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + ++ + IV + R + + DM GV+ +++ ++ + +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 69 VSK-----------------------------------AIQVFGNLNELGMNRDTEALNV 93
V K AI+V L E G + D A N+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 94 LLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD 151
L+ C++++ + M +GK ++ TYN + + K F +ER+M++M D
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI-TYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK-ERNCQPDTAVYNAMIFNFISVNDFDE 210
G+ P TT+G ++ G +DEA ++F M P+T +YN +I F + +F +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIK 270
+ EM PN++TY + L + + L++ DEM+ P T+ ++
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Query: 271 HL 272
L
Sbjct: 731 RL 732
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 143/360 (39%), Gaps = 22/360 (6%)
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-- 120
F R G V++++ V+ L+ ++++ NV++ L V A V + M K +
Sbjct: 162 FGRMGMVNQSVLVYERLD--SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFP 219
Query: 121 -NVATYNAVAGGWSKFGRFNE--IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
N T + V K E I ++ + GV+P+ F+ L + R + A+
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
++ + + + +NA++ D +M P++ T +I L
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTI--------TCFIKHLCSYGPPFAA---LVIYK 286
+ R+V +AL++F++M G G + I LC G A LV K
Sbjct: 340 CKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
R C + Y L+ + GK T + M+E +V I+ G+C
Sbjct: 398 LEER--CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYW 406
L AV+ + +G + + Y LI+ +N E+A + K+ A +A+ Y+
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 1/293 (0%)
Query: 112 NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
+S + K YN + ++FG E++R+ EM D V+PD TF + G + G
Sbjct: 110 DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
+ EA + + + C PD Y + I + D K + EM N C N +YT
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
++I L +K+ +AL + +M P T T I LC G A+ ++K+ S
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G Y +L+ + E M E G +V Y +I G C + A
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKA 348
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARN 404
+ ++ + L + P + Y+ LI S N + AY+L ++ + + N R
Sbjct: 349 MGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 6 NWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVR 65
++ +K+ P+ Y ++ +L R M + +M + V D+ + +V+ + +
Sbjct: 111 SFEIKYKLTPK---CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 66 AGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVAT 124
G+V +A Q L + G + D + C R V AA VF M + N +
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
Y + G + + +E ++ +M+ D P+ T+ V ++ L +G+ EA +F M
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
E +PD +Y +I +F S + DE ML N PN+ TY +I ++ V
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VH 346
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
A+ + +ML ++P T I CS G
Sbjct: 347 KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 3/227 (1%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
+ W ++ P D +Y + RRK V ++M NG + + + ++
Sbjct: 177 YVTWLIQAGCDP-DYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL 235
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
A + +A+ + + + + VL+ LC A ++F M + + +
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
Y + + +E +++ M +G+ P+ T+ ++G + + +A +
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSK 354
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
M E+N PD YN +I S + D + + M + PN T
Sbjct: 355 MLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 155/387 (40%), Gaps = 1/387 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
SY +++ L G+ M G + ++++ + G + KA +F +
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRF 138
G + VL+ LC + A+ V M K ++ +V TYNA+ G+ K GR
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
++ ME P+ TF +EGL R G+ +A + M + PD YN +
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + K + M D EP+ T+T II A ++ K A MLR G+
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
T T I +C G AL I + + + + ++L LSK K L
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
+ ++ + G V Y ++ GL G + + ++E G P+ Y+ +IN L
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 379 DSNNAERAYKLFLKIKHARSLENARNY 405
E A KL ++ + N Y
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 163/370 (44%), Gaps = 1/370 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y V++KAL R + +M G + ++ ++++D R G + +A V +
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRF 138
+ + N L+ C+ V A + M+ + NV T+N + G + G+
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ ++K M +G++PD ++ V ++GL R G M+ A+++ SM + +PD + A+
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I F D + ML + T T +I + + K DAL + + +++ +
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
L ++ + L L + K + G S+ Y L+ L + G
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
I E M+ G +V Y II+GLC G++E A ++ G P+ + Y+ ++ +
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 379 DSNNAERAYK 388
++ +RA +
Sbjct: 663 NNGKLDRALE 672
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 138/345 (40%), Gaps = 33/345 (9%)
Query: 42 RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
R M +G ++ +V++ + G+ A + ++G D+ LL C
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 102 SHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
++ A VF+ M +V AP+ ++
Sbjct: 244 LNLRDALKVFDVMSKEVT---------------------------------CAPNSVSYS 270
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ + GL GR++EAF + M E+ CQP T Y +I D+ ++EM+
Sbjct: 271 ILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR 330
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
C+PN+ TYT +I L R K+ +A + +M++ + P T I C G A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ + C ++ + L+ L ++GK +++ + M + G S D+ Y +I G
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
LC G + A ++ P L ++ +IN A+ A
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM- 183
Y + K G E M ++ G D L G R + +A +VF M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
KE C P++ Y+ +I V +E ++M C+P+ TYT +I AL R +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A +FDEM+ G P T T I LC G A + +K + S+ Y L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K G+ + M++ +V + ++ GLC +G+ AV +++ L G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLF 390
P + Y+ LI+ L + AYKL
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/374 (18%), Positives = 136/374 (36%), Gaps = 37/374 (9%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F+ + P ++ +Y V++ L R GV R M + + ++ + +++ +
Sbjct: 323 LFDEMIPRGCKP-NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
+ G V A ++ + + + N L++ LC A + M ++ ++
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
+YN + G + G N +++ M + PDC TF + + G+ D A
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN------------------EMLSNDCE 224
M + D +I V + + +MLS C+
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 225 -----------------PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
P++ TYT ++ L+R + + ++ + M G LP T
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 268 FIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
I LC +G A + + SG + + Y +++ GK L M E G
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Query: 328 YSSDVEVYEYIISG 341
Y + +Y ++ G
Sbjct: 682 YELNDRIYSSLLQG 695
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 25 VKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGM 84
V +G+ + F++ L MR+ L ++++D + V + + + G +N+LG+
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSL---NVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 85 NRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIER 143
L+ L + + + MK NV Y + G +FGR E E+
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
++ M+ GV+P+ T+ V ++G G++D A E +M ER + + +Y++++ F+
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 227 LDTY--TRIITALLRRRKVVDALQMFDEMLRHGVLPPTG-TITCFIKHLCSYGPPFAALV 283
LD++ T ++ R + DAL++FD M + P + + I LC G A
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 284 IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC 343
+ + GC S Y +L+ L G N+++EM G +V Y +I GLC
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 344 NIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENAR 403
G++E A V + + PS + Y+ LIN A++L ++ N R
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 404 NY 405
+
Sbjct: 408 TF 409
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 145/357 (40%), Gaps = 1/357 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
++ ++K L + VL++M+ G D SI+ D + A+ V+
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFN-SMKGKVAFNVATYNAVAGGWSKFGRF 138
+ G+ + ++LL LC+ + A + M + N YN + G+ + G
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
++ ME G+ PD + + G M+ A + MK + P YN +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + +FD+C EM N PN+ +Y +I L + K+++A + +M GV
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P I CS G A K+ + G +++ Y L+ LS GK +
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ E+ G DV Y +ISG G ++ + + EE G P+ Y LI+
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 147/354 (41%), Gaps = 1/354 (0%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M+ + +E L+ + ++ +AG V A V + +LG D ++L
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 104 VGAASSVFNS-MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
AA V+ + + V N T + + K G+ + E ++ A G+ P+ +
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++G R G + A +M+++ +PD YN +I F + + + K N+M
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
P+++TY +I R+ + + EM +G +P + I LC A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 283 VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
++ + G + + Y +L+ GK +EM + G ++ Y +I GL
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
G+L A ++ E KG P Y+ LI+ + N +R L+ ++K +
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 7/336 (2%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M++ GV + +I++ + R K + + + G + + L+ CLC+ S
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 104 VGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+ A V M+ + V+ V YN + G G+ + R KEM G+ + T+
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++GL G++ EA ++ + + +PD YN++I + + C+ Y EM +
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEM-LRHGVLPPTGTITCFIKHLCSYGPPFAA 281
+P L TY ++ +L + + ++F EM L+ +L G + C+ H G A
Sbjct: 630 IKPTLKTY-HLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVH----GDMEKA 684
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ K+ + Y L++ K+GK + ++ +EM + + Y I+ G
Sbjct: 685 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
C + +A + E KGF + ++L++ L
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 183/459 (39%), Gaps = 73/459 (15%)
Query: 7 WAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
+A+++ + S +++ L + K F + V ++ + M + + V+
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATY 125
V K +++F + + NVL+ LC+ + A +F+ M + ++ TY
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 126 NAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
N + G+ K G + +V + M+AD + P TF L+GL +AG +++A V MK+
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDEC--------------MKYYN--------------- 216
PD + +++F+ S N+ E M Y
Sbjct: 313 LGFVPDAFTF-SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 217 ---EMLSNDCE----PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
E+L + PN Y +I R+ +V A + M + G+ P C I
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL---MRLSKLGKC------------- 313
+ C G A K + G + S+E Y IL+ R + KC
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 314 ------GTLLN-------------IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLV 354
GTL+N + +M++ G S V +Y +I G C+ G++E+A
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 355 MEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+E L KG + + Y+ LI+ L + A L L+I
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 154/392 (39%), Gaps = 37/392 (9%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F +++ P+L D SY ++ L K S + +R G+ L++++D
Sbjct: 96 FSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA 123
V+ I VF N+ E ++ + S VG +FN MK
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMK-------- 206
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
D + P + V ++GL + RM++A ++F M
Sbjct: 207 --------------------------HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
R P YN +I + + ++ K M ++ EP+L T+ ++ L + V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
DA + EM G +P T + S AAL +Y+ A SG ++ IL
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 304 LMRLSKLGKCGTLLNIW-EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
L L K GK I EM +G ++V +Y +I G C G L A + +E +G
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEV-IYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 363 FCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
P L Y+ LI + + E A K K+K
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 126/316 (39%), Gaps = 32/316 (10%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + + +Y +++ GR+ F +L++M NG +++ +++ +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNA 127
+ +A V ++ + G++ N+L+ C + + A M K + N+ TYN
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK--- 184
+ G S G+ +E E ++ E+ G+ PD T+ + G G AG + ++ MK
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 185 ----------------------------ERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
E + +PD VYN ++ + D ++
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
+M+ + TY +I L+ K+ + + DEM + P T +K C
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVK 749
Query: 277 PPFAALVIYKKARRSG 292
+A V Y++ + G
Sbjct: 750 DYMSAYVWYREMQEKG 765
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 5/219 (2%)
Query: 42 RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
++M G+E +L+ + ++D G +S+A + ++ G+ D N L+
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 102 SHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
+V +++ MK + + TY+ + +K G ER+ EM + PD +
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SLKPDLLVY 668
Query: 161 GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS 220
L G M++AF + M E++ D YN++I + V E +EM +
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 221 NDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
+ EP DTY I+ + + A + EM G L
Sbjct: 729 REMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 1/236 (0%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y I+ L + + +M G+ D++ S ++DSF R+G + A Q+ ++
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFN 139
E +N D + L+ L + V A ++ M + F TYN++ G+ K R N
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
+ +R++ M + +PD TF + G +A R+D E+FC M R +T Y +I
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
F V D D N M+S+ PN T+ ++ +L ++++ A + +++ +
Sbjct: 259 HGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 3/276 (1%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
+++ + G A+ + + E + N ++ LC+ H A ++F M K
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 119 AF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
F +V TY+ + + + GR+ + E+++++M + PD TF + L + G++ EA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
E++ M R P T YN+MI F + ++ + + M S C P++ T++ +I
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
+ ++V + +++F EM R G++ T T T I C G AA + SG +
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQ--EGGYSSD 331
++ +L L + I E++Q EG + D
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLED 322
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 25/316 (7%)
Query: 46 VNGV--EADLLMLSIVVDSFVRAGHVSKAIQVFGNL-NELGMNRDTE-ALNVLLKCLCER 101
+NG+ E +L +VD V GH Q +G + N L DTE ALN+L K E
Sbjct: 17 MNGLCCEGRVLQALALVDRMVEEGH-----QPYGTIINGLCKMGDTESALNLLSKM--EE 69
Query: 102 SHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
+H+ A +V YNA+ K G + + EM G+ PD T+
Sbjct: 70 THIKA--------------HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
++ R+GR +A ++ M ER PD ++A+I + E + Y +ML
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
P TY +I ++ ++ DA +M D M P T + I C
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ I+ + R G + Y L+ ++G ++ M G + + ++ +++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 342 LCNIGQLENAVLVMEE 357
LC+ +L A ++E+
Sbjct: 296 LCSKKELRKAFAILED 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 39/311 (12%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V T+ + G GR + ++ M +G P +G + GL + G + A +
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 181 CSMKERNCQPDTAVYNAMIFN-------------FISVND---FDECMKY---------- 214
M+E + + +YNA+I F ++D F + + Y
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 215 ---------YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
+M+ P++ T++ +I AL++ KV +A +++ +MLR G+ P T T
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
I C A + C+ + + L+ K + + I+ EM
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G ++ Y +I G C +G L+ A ++ + G P+ + + ++ L +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 386 AYKLFLKIKHA 396
A+ + ++ +
Sbjct: 305 AFAILEDLQKS 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++ + R ++ +LRDM + D++ S ++++ V+ G VS+A +++
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
G++ G+ T N ++ C++ + A + +SM K + +V T++ + G+ K
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
R + + EM G+ + T+ + G + G +D A ++ M P+ +
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 196 NAMIFNFIS 204
+M+ + S
Sbjct: 290 QSMLASLCS 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 97/258 (37%), Gaps = 4/258 (1%)
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
M G PD TF + GL GR+ +A + M E QP Y +I + D
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
+ + ++M + ++ Y II L + + A +F EM G+ P T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 268 FIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
I C G A + + + + L+ L K GK I+ +M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 328 YSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAY 387
Y +I G C +L +A +++ K P + +S LIN + +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 388 KLFLKIKHARSLENARNY 405
++F ++ + N Y
Sbjct: 237 EIFCEMHRRGIVANTVTY 254
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 171/419 (40%), Gaps = 39/419 (9%)
Query: 10 KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
KH L ++ V+++ L + +L+ M++ G + V+ + + G
Sbjct: 73 KHTPL-----TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLA 127
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNA 127
+A+++F + E G + + N +L L + + V+ MK + F NV TYN
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK-RDGFEPNVFTYNV 186
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE------------ 175
+ K + + ++++ EM G PD ++ + + G + E
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246
Query: 176 ------------------AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
AFE+ M E+ P+ Y+ +I + + + +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR-HGVLPPTGTITCFIKHLCSYG 276
ML C PN+ T + ++ R DAL ++++M+R G+ P ++ CS+G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
A+ ++ GC+ ++ Y L+ +K G + IW +M G +V VY
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
++ LC + + A ++E + PS ++ I L D+ + A K+F +++
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 152/368 (41%), Gaps = 5/368 (1%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ ++ SY ++ L L M G ++ LS +V G A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 73 IQVFGNL-NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAG 130
+ ++ + G+ + A N L++ C ++ A SVF+ M+ + N+ TY ++
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G++K G + + +M G P+ + +E L R + EA + M + NC P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEM-LSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
+NA I D K + +M + C PN+ TY ++ L + ++ +A +
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
E+ GV + T + C+ G P AL + K G + ++++ K
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 310 LGKCGTLLNIWEEMQEG--GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
GK + + + G + DV Y +I GLC E+ V+++E + G PS
Sbjct: 576 QGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSI 635
Query: 368 LVYSKLIN 375
+S LIN
Sbjct: 636 ATWSVLIN 643
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 167/415 (40%), Gaps = 33/415 (7%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K ++ +Y V++KAL + +L +M G D + + V+ S G
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 69 VSK------------------------------AIQVFGNLNELGMNRDTEALNVLLKCL 98
V + A ++ + E G++ + + + L+ L
Sbjct: 232 VKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 99 CERSHVGAASSVFNSM-KGKVAFNVATYNA-VAGGWSKFGRFNEIERVMKEMEADGVAPD 156
C + A S M K N+ T ++ V G + + F+ ++ + + G+ P+
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
+ ++G G + +A VF M+E C P+ Y ++I F D + +N
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
+ML++ C PN+ YT ++ AL R K +A + + M + P T FIK LC G
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Query: 277 P-PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVY 335
+A V + ++ C ++ Y LL L+K + + E+ G Y
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Query: 336 EYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
++ G CN G A+ ++ + + G P + + +I AERA ++
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 168/394 (42%), Gaps = 6/394 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+ ++ ++ +++ L + G L M V G++ ++ + +V F G + A
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFNVATYNAVAGG 131
+ + G D + N +L +C G AS V MK G V +V+ YN + G
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVS-YNILIRG 336
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
S G EM G+ P T+ + GL +++ A + ++E+ D
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ YN +I + D + ++EM+++ +P TYT +I L R+ K +A ++F+
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+++ G+ P + + C+ G A + K+ Y L+ L G
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
K + EM+ G D Y +ISG G ++A +V +E L GF P+ L Y+
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 372 KLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
L+ L + E A +L ++K + N ++
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 8/339 (2%)
Query: 57 SIVVDSFVRA----GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN 112
+I+ D VR V +AI+ F + E G TE N +L L + + A +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 113 SM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
M + ++ NV T+N + K G+ + + + ME G+ P T+ ++G G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
R++ A + MK + QPD YN ++ + E ++ EM P+ +Y
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYN 331
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
+I + A DEM++ G++P T I L AA ++ ++ R
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G + Y IL+ + G + +EM G Y +I LC + A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ E+ + KG P ++ + L++ N +RA+ L
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 36/288 (12%)
Query: 9 VKHPALPEDIGSYRVIVK----------ALGRR----------KFFSFMMGV-------- 40
+K L D SY ++++ A R F+++ +
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 41 -------LRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNV 93
+R++R G+ D + +I+++ + + G KA + + G+
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 94 LLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
L+ LC ++ A +F + GK + ++ N + G G + ++KEM+
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+ PD T+ + GL G+ +EA E+ MK R +PD YN +I + D
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+EMLS P L TY ++ L + ++ A ++ EM G++P
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 124/307 (40%), Gaps = 1/307 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VLR+M+ G+ D + +I++ G + A + + GM N L+ L
Sbjct: 314 VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 100 ERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + AA + ++ K + + TYN + G+ + G + + EM DG+ P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ + L R + EA E+F + + +PD + N ++ ++ + D EM
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
P+ TY ++ L K +A ++ EM R G+ P + I G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
A ++ + G ++ Y LL LSK + + EM+ G + + +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 339 ISGLCNI 345
I + N+
Sbjct: 614 IEAMSNL 620
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 3/223 (1%)
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+DEA E F MKE+ P T N ++ +N + +Y +M + + N+ T+
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
+I L + K+ A M G+ P T ++ G A +I + + G
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
M+ Y +L + G+ +L EM+E G D Y +I G N G LE A
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
+E + +G P+ Y+ LI+ L N E A L +I+
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 136/322 (42%), Gaps = 5/322 (1%)
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGW 132
QV+ + +G++ +T N+L C S+ M+ + ++ TYN + +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+ GR E + K M V PD T+ ++GL + GR+ EA + F M +R +PD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
YN +I+ + + K +EML N P+ T I+ +R +++ A+ E
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK-ARRSGCTISMEAYKILLMRLSKLG 311
+ R V P I LC G PFAA + + G E Y L+ LS+
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
L + +++ D + Y +I LC IG+ A +M E P +
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICG 521
Query: 372 KLIN---KLLDSNNAERAYKLF 390
L+ K LD + AER LF
Sbjct: 522 ALVYGYCKELDFDKAERLLSLF 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%)
Query: 110 VFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
V S + ++ ++ + G+ K G E RV +E+ G + T L GL +
Sbjct: 154 VLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLK 213
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
M++ ++V+ M P+T +N + F + ++F E + +M EP+L T
Sbjct: 214 LDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVT 273
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR 289
Y ++++ RR ++ +A ++ M R V+P T T IK LC G A + +
Sbjct: 274 YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
G +Y L+ K G + EM D + I+ G G+L
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Query: 350 NAV 352
+AV
Sbjct: 394 SAV 396
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 4/197 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D SY ++ A + +L +M N V D ++V+ FVR G + A+
Sbjct: 340 DCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM---KGKVAFNVATYNAVAGGWS 133
L L ++ E + L+ LC+ AA + + + +G A TYN + S
Sbjct: 400 VELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEA-KPETYNNLIESLS 458
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
+ E + +++ D T+ + L R GR EA + M + +PD+
Sbjct: 459 RCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSF 518
Query: 194 VYNAMIFNFISVNDFDE 210
+ A+++ + DFD+
Sbjct: 519 ICGALVYGYCKELDFDK 535
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 165/392 (42%), Gaps = 2/392 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V F + +L ++ + ++ L + + F M + DM G+ D+ + + V+
Sbjct: 176 VLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIR 235
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAF 120
S +S+A ++ ++ G + + NVL+ LC++ V A + + GK +
Sbjct: 236 SLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP 295
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V TY + G K F +M EM +P +EGL + G+++EA +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
+ + P+ VYNA+I + F E ++ M PN TY+ +I RR
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ AL EM+ G+ I C +G AA + ++ Y
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
L+ GK L ++ EM G + + + ++SGL G + +AV + E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
P+R+ Y+ +I + + +A++ FLK
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFE-FLK 566
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 148/364 (40%), Gaps = 1/364 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ I ++ ++ L R + + +M V+ + + +++++ + G +SKA
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGG 131
+ + E G+ DT + L+ LC A + + KG N Y + G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ + G+ E V +EM GV D +GV ++G + F + M +R +PD
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+Y +MI DF E ++ M++ C PN TYT +I L + V +A +
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+M +P T CF+ L V A G + Y +L+ + G
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ + M G S D Y +I+ LC ++ A+ + KG P R+ Y+
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 372 KLIN 375
LI+
Sbjct: 862 TLIH 865
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 2/335 (0%)
Query: 58 IVVDSFVRAGHVSKAIQVFGNL-NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG 116
+++ +VR+ V + VF + ++ + + L+ LL L + H G A +FN M
Sbjct: 161 LLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVS 220
Query: 117 -KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
+ +V Y V + + + ++ MEA G + + V ++GL + ++ E
Sbjct: 221 VGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT 235
A + + ++ +PD Y +++ V +F+ ++ +EML P+ + ++
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTI 295
L +R K+ +AL + ++ GV P I LC A +++ + + G
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 296 SMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
+ Y IL+ + GK T L+ EM + G V Y +I+G C G + A M
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 356 EEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
E ++K P+ + Y+ L+ +A +L+
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 157/375 (41%), Gaps = 9/375 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
+I Y V++ L +++ +G+ +D+ ++ D++ +V + +++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA----TYNAVAGGW 132
+ L + A++ L++ L +R G N +K V F V+ YNA+
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKR---GKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K +F+E E + M G+ P+ T+ + ++ R G++D A M + +
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
YN++I D + EM++ EP + TYT ++ + K+ AL+++ E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
M G+ P T T + L G A+ ++ + + Y +++ + G
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP-SRLVYS 371
+EM E G D Y +I GLC GQ A V + LHKG C + + Y+
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICYT 616
Query: 372 KLINKLLDSNNAERA 386
L++ E A
Sbjct: 617 GLLHGFCREGKLEEA 631
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 166/389 (42%), Gaps = 4/389 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
L D+ +Y +V L + + F + ++ +M +S +V+ + G + +A+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGG 131
+ + + G++ + N L+ LC+ A +F+ M GK+ N TY+ +
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM-GKIGLRPNDVTYSILIDM 411
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ + G+ + + EM G+ + + G + G + A M + +P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
Y +++ + S ++ ++ Y+EM P++ T+T +++ L R + DA+++F+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
EM V P T I+ C G A K+ G +Y+ L+ L G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ + + +G + Y ++ G C G+LE A+ V +E + +G + Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 372 KLINKLLDSNNAERAYKLFLKIKHARSLE 400
LI+ L + + + L LK H R L+
Sbjct: 652 VLIDGSLKHKDRKLFFGL-LKEMHDRGLK 679
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 108/256 (42%), Gaps = 37/256 (14%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ Y V++ + K G+L++M G++ D ++ + ++D+ + G +A ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAA----------SSVFNSM----------KG 116
+ G + ++ LC+ V A SSV N + KG
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 117 KVAF----------------NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
+V N ATYN + G+ + GR E ++ M DGV+PDC T+
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 161 GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS 220
+ L R + +A E++ SM E+ +PD YN +I + + + NEML
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Query: 221 NDCEPNLDTYTRIITA 236
PN T +R T+
Sbjct: 886 QGLIPNNKT-SRTTTS 900
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 11/261 (4%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL---GMNRDTEALNVL 94
+ V ++M GV+ DL+ +++D ++ H + + FG L E+ G+ D +
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLK--HKDRKL-FFGLLKEMHDRGLKPDDVIYTSM 688
Query: 95 LKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
+ + A +++ M +G V N TY AV G K G NE E + +M+
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVP-NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 153 VAPDCTTFGVFLEGLGRAG-RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
P+ T+G FL+ L + M +A E+ ++ + +TA YN +I F +E
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEA 806
Query: 212 MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
+ M+ + P+ TYT +I L RR V A+++++ M G+ P I
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 272 LCSYGPPFAALVIYKKARRSG 292
C G A + + R G
Sbjct: 867 CCVAGEMGKATELRNEMLRQG 887
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%)
Query: 225 PNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVI 284
P + T + ++ L++ R A+++F++M+ G+ P T I+ LC A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 285 YKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCN 344
+GC +++ Y +L+ L K K + I +++ DV Y ++ GLC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 345 IGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+ + E + +M+E L F PS S L+ L E A L ++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 151/353 (42%), Gaps = 2/353 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FFNWA +P+ Y + K+L K + M +L+ M+ ++ L +++ +
Sbjct: 97 FFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQY 156
Query: 64 VRAGHVSKAIQVF-GNLNELGMNRDTEALNVLLKCLCE-RSHVGAASSVFNSMKGKVAFN 121
+ GHV +A+++F G LG + + N LL LC+ + GA + + ++ + +
Sbjct: 157 GKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPD 216
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
TY + GW G+ E + + EM G P + +EGL AG ++ A E+
Sbjct: 217 KRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVS 276
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M + PD +N +I + + C++ Y ++DTY +I A+ +
Sbjct: 277 KMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIG 336
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
K+ +A ++ + + G P IK +C G A + + + Y
Sbjct: 337 KIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYT 396
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLV 354
+L+ + GK N EM E G ++ + GL N G+ + A+ +
Sbjct: 397 MLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 146/341 (42%), Gaps = 9/341 (2%)
Query: 61 DSFVRAGHV----SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG 116
D F HV + I +LN L + +E + +L+ S+ + FN +
Sbjct: 46 DYFAAINHVVNIVRREIHPERSLNSLRLPVTSEFVFRVLRATSRSSN--DSLRFFNWARS 103
Query: 117 KVAFNVAT--YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
++ + Y +A + ++ + +++K+M+ + T +E G+ G +D
Sbjct: 104 NPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVD 163
Query: 175 EAFEVFCSM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
+A E+F + K CQ VYN+++ V F M+ +P+ TY +
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ K+ +A + DEM R G PP I+ L + G +A + K + G
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
++ + IL+ +SK G+ + ++ + G D++ Y+ +I + IG+++ A
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
++ + G P +Y+ +I + + + A+ F +K
Sbjct: 344 LLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 150/336 (44%), Gaps = 6/336 (1%)
Query: 2 VTFFNWAVKHP-ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDM-RVNGVEADLLM--LS 57
++ F WA K P LP D Y V+ L + + F + + +M + + DL +
Sbjct: 189 LSLFRWAKKQPWYLPSD-ECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KG 116
V+ +A + A F E G DT+ N L+ + A ++ SM K
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
+ +TY + +K GR + ++ ++M+ + P + F ++ +G+AGR+D +
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
+V+ M+ +P ++ ++I ++ D ++ ++EM + PN YT II +
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
+ K+ A+ +F +M + G LP T +C ++ G +A+ IY +G
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG 487
Query: 297 MEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
+ +Y LL L+ I EM+ GYS DV
Sbjct: 488 LSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 135/299 (45%), Gaps = 5/299 (1%)
Query: 103 HVGAASSVFNSMKGKVAFNVAT--YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
V AA S+F K + + + Y + G ++ F I+ + +EM D + +F
Sbjct: 184 EVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSF 243
Query: 161 GVF---LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ ++ L +A +++ AF F +E C+ DT YN ++ F++ + + Y
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
M D + TY II +L + ++ A ++F +M + P + + + G
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
++ +Y + + G S + L+ +K GK T L +W+EM++ G+ + +Y
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
II G+LE A+ V ++ GF P+ YS L+ S + A K++ + +A
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 121/283 (42%), Gaps = 2/283 (0%)
Query: 112 NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
+S G ++FN YN V +K + K+ + G D T+ + G
Sbjct: 235 SSSHGDLSFN--AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKG 292
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
+AFE++ SM++ + D + Y +I + D K + +M P+ ++
Sbjct: 293 LPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFS 352
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
++ ++ + ++ +++++ EM G P I G AL ++ + ++S
Sbjct: 353 SLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS 412
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G + Y +++ +K GK + ++++M++ G+ Y ++ GQ+++A
Sbjct: 413 GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSA 472
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+ + + G P Y L+ L + + A K+ L++K
Sbjct: 473 MKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMK 515
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 178/415 (42%), Gaps = 8/415 (1%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
+ FN ++ P I +Y +V AL R+K F ++ ++ + NG++ D ++ + ++++
Sbjct: 340 SIFNTLIEEGHKPSLI-TYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINA 398
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAF 120
+G++ +A+++F + E G N L+K + + +S + + M +
Sbjct: 399 SSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQP 458
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE-V 179
N T N + W + E ++ +M++ GV PD TF + R G A + +
Sbjct: 459 NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M +P+ ++ + +E ++++ M PNL + +I L
Sbjct: 519 IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+ ++ D M GV P T + + S G IY G + A
Sbjct: 579 INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
+ IL ++ G+ I +M++ G +V +Y IISG C+ G+++ A+ V ++
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Query: 360 H-KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNYWR--SNGW 411
G P+ Y LI ++ +A +L LK +++ R + ++GW
Sbjct: 699 GIVGLSPNLTTYETLIWGFGEAKQPWKAEEL-LKDMEGKNVVPTRKTMQLIADGW 752
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 2/271 (0%)
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
G +V + + G + GR E + + +G P T+ + L R
Sbjct: 313 GTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS 372
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT 235
+ +++ +PDT ++NA+I + D+ MK + +M + C+P T+ +I
Sbjct: 373 LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIK 432
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTG-TITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
+ K+ ++ ++ D MLR +L P T ++ C+ A I K + G
Sbjct: 433 GYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVK 492
Query: 295 ISMEAYKILLMRLSKLGKCGTLLN-IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
+ + L +++G T + I M +V I++G C G++E A+
Sbjct: 493 PDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
G P+ V++ LI L+ N+ +
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 37/223 (16%)
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
E +N ++ +P+L TYT ++TAL R++ L + ++ ++G+ P T I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK----------------- 312
G A+ I++K + SGC + + L+ K+GK
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 313 ------CGTLLNIW------EE-------MQEGGYSSDVEVYEYIISGLCNIGQLENAV- 352
C L+ W EE MQ G DV + + IG A
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
+++ LH P+ ++N + E A + F ++K
Sbjct: 517 MIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 158/375 (42%), Gaps = 2/375 (0%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
T F ++ + ++ Y ++ A R K + +M G+E + SI++D
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAF 120
F + A V +N + N ++ LC+ A + ++ + + +
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM 588
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ +YN++ G+ K G + +EM +G +P+ TF + G ++ RMD A E+
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
MK + D Y A+I F ND ++E+ PN+ Y +I+
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
K+ A+ ++ +M+ G+ T T I L G A +Y + G +
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
+L+ LSK G+ + EEM++ + +V +Y +I+G G L A + +E L
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLE 828
Query: 361 KGFCPSRLVYSKLIN 375
KG V++ L++
Sbjct: 829 KGIVHDDTVFNLLVS 843
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 154/351 (43%), Gaps = 2/351 (0%)
Query: 41 LRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCE 100
L+ M G+E +++ + ++ + R ++ A +F + E G+ + ++L+ +
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 101 RSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEM-EADGVAPDCT 158
A V N M N YN + G K G+ ++ + +++ + + + CT
Sbjct: 532 NKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCT 591
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
++ ++G + G D A E + M E P+ + ++I F N D ++ +EM
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
S + + +L Y +I ++ + A +F E+ G++P I + G
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
AA+ +YKK G + + Y ++ L K G +++ E+ + G D ++ +
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
++GL GQ A ++EE K P+ L+YS +I N A++L
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 145/325 (44%), Gaps = 4/325 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y +++ + K V+ M + EA+ ++ + +++ + G SKA ++ NL
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 80 -NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK--GKVAFNVATYNAVAGGWSKFG 136
E + + N ++ + +A + M GK + NV T+ ++ G+ K
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK-SPNVVTFTSLINGFCKSN 639
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
R + + EM++ + D +G ++G + M A+ +F + E P+ +VYN
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++I F ++ D + Y +M+++ +L TYT +I LL+ + A ++ E+L
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G++P + L G A + ++ ++ T ++ Y ++ + G
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISG 341
+ +EM E G D V+ ++SG
Sbjct: 820 FRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 10/305 (3%)
Query: 92 NVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA 150
N + C++ V AA+S M+ K + NV YN + + + + EM
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 151 DGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDE 210
G+ P+ T+ + ++G + A++V M N + + +YN +I V +
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 211 CMKYYNEMLSNDCEP-----NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
EML N + + +Y II ++ A++ + EM +G P T
Sbjct: 573 A----KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
T I C AL + + + + + AY L+ K T ++ E+ E
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPE 688
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
G +V VY +ISG N+G+++ A+ + ++ ++ G Y+ +I+ LL N
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 386 AYKLF 390
A L+
Sbjct: 749 ASDLY 753
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 159/443 (35%), Gaps = 72/443 (16%)
Query: 24 IVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELG 83
++ +L R + M + GV D + +++ + +R +A+++F + G
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 84 MNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA--TYNAVAGGWSKFGRFNEI 141
D ++ ++ C+ + A + M+GK+ + TY +V + K G E
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 142 ERVMKEM-----------------------------------EADGVAPDCTTFGVFLEG 166
RVM EM E +G+APD F V +E
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM---------------IFN---------- 201
+ M++A E + MK P + + + M IFN
Sbjct: 390 FCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG 449
Query: 202 ---------FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
F D + M EPN+ Y ++ A R + + A +F E
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
ML G+ P T + I A + + S + Y ++ L K+G+
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 313 CGTLLNIWEEM-QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ + + +E YS Y II G +G ++AV E G P+ + ++
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 372 KLINKLLDSNNAERAYKLFLKIK 394
LIN SN + A ++ ++K
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMK 652
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
F L R RMD A + F M +R P N ++ + + N DE + YN+M+
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
+ T ++ A LR RK +A+++F ++ G P + ++ C
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 280 AALVIYKKAR-RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
AL + ++ R + G S E Y +++ K G + + +EM G V +
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
++G C +L A+ + +G P ++++S ++ + E+A + ++++K R
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 112/311 (36%), Gaps = 37/311 (11%)
Query: 82 LGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNE 140
G A N LL + A F M KV V N V + +E
Sbjct: 163 FGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDE 222
Query: 141 IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
+ + +M GVA D T + + R + +EA ++F + R +PD +++ +
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 201 NFISVNDFDECMKYYNEMLSNDCEP-NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
D + EM P + +TYT +I A ++ + +A+++ DEM+ G+
Sbjct: 283 AACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIP 342
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
T + C K + G L++
Sbjct: 343 MSVIAATSLVNGYC-----------------------------------KGNELGKALDL 367
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
+ M+E G + D ++ ++ C ++E A+ PS ++ +I L
Sbjct: 368 FNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLK 427
Query: 380 SNNAERAYKLF 390
+ + E A ++F
Sbjct: 428 AESPEAALEIF 438
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 167/411 (40%), Gaps = 75/411 (18%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
DI +Y ++K + M LRDM G EAD + ++ + + ++
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSK 134
++E G+ A ++++ LC+ + +VF +M KG NVA Y + G++K
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP-NVAIYTVLIDGYAK 374
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGV-------------------------------- 162
G + R++ M +G PD T+ V
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 163 ---FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
++GLG+AGR+DEA +F M E+ C D+ YNA+I F DE + + M
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 220 SND-CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ C+ + TYT +++ + + + +AL+++D M+ G+ P T CF
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP---TAACF---------- 541
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
+A +G +S GK I +E+ G D E +
Sbjct: 542 --------RALSTGLCLS--------------GKVARACKILDELAPMGVILDAAC-EDM 578
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
I+ LC G+++ A + + +G + + +IN L A+ A KL
Sbjct: 579 INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 167/392 (42%), Gaps = 4/392 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ F + +K P + + ++K+ G+ ++ V R M+ NG+E L + +++
Sbjct: 171 IRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN 230
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVA 119
V A V A +VF + + D N ++K C+ A M +G A
Sbjct: 231 GLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA 290
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+ TY + F + +EM+ G+ F + + GL + G+++E + V
Sbjct: 291 DKI-TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
F +M + +P+ A+Y +I + ++ ++ + M+ +P++ TY+ ++ L +
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+V +AL F G+ + + I L G A ++++ GCT
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 300 YKILLMRLSKLGKCGTLLNIWEEM-QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
Y L+ +K K + +++ M +E G V Y ++SG+ + E A+ + +
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ KG P+ + L L S RA K+
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 160/390 (41%), Gaps = 2/390 (0%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
+FF W+ K ++ Y +V L K + V +++ + + ++ S
Sbjct: 137 SFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKS 196
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFN 121
F + G V + + V+ + E G+ N L+ L V +A VF M+ G++ +
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPD 256
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
+ TYN + G+ K G+ + +++ME G D T+ ++ ++
Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 316
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M E+ Q ++ +I +E + M+ +PN+ YT +I +
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
V DA+++ M+ G P T + + LC G AL + R G I+ Y
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYS 436
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
L+ L K G+ ++EEM E G + D Y +I +++ A+ + + +
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Query: 362 GFCPSRL-VYSKLINKLLDSNNAERAYKLF 390
C + Y+ L++ + + E A KL+
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLW 526
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 142/345 (41%), Gaps = 10/345 (2%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D+L L+ VD R VS I+ F E M A N L+K + V V+
Sbjct: 160 DVLALAKDVD---RIRFVSSEIKKF----EFPMT--VSAANALIKSFGKLGMVEELLWVW 210
Query: 112 NSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRA 170
MK + + TYN + G + ERV + ME+ + PD T+ ++G +A
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
G+ +A E M+ R + D Y MI + +DF C+ Y EM + +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
+ +I L + K+ + +F+ M+R G P T I G A+ + +
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
G + Y +++ L K G+ L+ + + G + + Y +I GL G+++
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 351 AVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
A + EE KG Y+ LI+ + A LF +++
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 160/389 (41%), Gaps = 37/389 (9%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FFNW + +G Y ++ G + + ++ +M NG + D+ +I++ +
Sbjct: 175 FFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVY 234
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
+A + K + VF + + G D A N++++ LC A + M K + F +
Sbjct: 235 GKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGL 294
Query: 123 ATYNAVAGGWSKF-----------------------------------GRFNEIERVMKE 147
TY + +K G+ E +++E
Sbjct: 295 RTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRE 354
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
++ + D F + ++GL RA RM +A E+ MK R D+ VY +I ++ ND
Sbjct: 355 LKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQND 413
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
+ ++ + + + P + TYT I+ L + ++ +F+EM+ +G+ P + IT
Sbjct: 414 VSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA 473
Query: 268 FIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
+ A ++ G + ++Y I + L + + ++ I+ +M
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Query: 328 YSSDVEVYEYIISGLCNIGQLENAVLVME 356
+++ ++IS + G+ E L+ E
Sbjct: 534 IVIRDDIFSWVISSMEKNGEKEKIHLIKE 562
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 138/350 (39%), Gaps = 39/350 (11%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
++ FF+W K + +Y + +K G K F M + +MR G +I++
Sbjct: 661 VLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMI 720
Query: 61 DSFVRAGHVSKAIQVFGNLNELGM-------------------------NR--------- 86
+ R G + AI+ F + ++G+ R
Sbjct: 721 MQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSG 780
Query: 87 ---DTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVAT-YNAVAGGWSKFGRFNEIE 142
D E + L CLCE + A S +S+ GK+ F V Y+ + G+ E
Sbjct: 781 FVPDRELVQDYLGCLCEVGNTKDAKSCLDSL-GKIGFPVTVAYSIYIRALCRIGKLEEAL 839
Query: 143 RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNF 202
+ E + D T+G + GL + G + +A + SMKE +P VY ++I F
Sbjct: 840 SELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYF 899
Query: 203 ISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPT 262
++ ++ +M CEP++ TYT +I + KV +A F M G P
Sbjct: 900 FKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDF 959
Query: 263 GTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
T + FI LC AL + + G S ++ + L++ GK
Sbjct: 960 KTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 126/301 (41%), Gaps = 6/301 (1%)
Query: 92 NVLLKCLCERSHVGAASSVFNSMKGKVAFN--VATYNAVAGGWSKFGRFNEIERVMKEME 149
NVL +C + H+ A FN +K K F+ V YN + + + ++ ++ EME
Sbjct: 160 NVLKRCF-KVPHL--AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEME 216
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
+G D T+ + + G+A ++ + VF M++ + D YN MI + D
Sbjct: 217 KNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGD 276
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
+++Y EM+ L TY ++ + + KV + D+M+R + +
Sbjct: 277 LALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
K C G AL + ++ + + + ++IL+ L + + L I + M+
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL- 395
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
D VY IISG + A+ E G P Y++++ L E+ L
Sbjct: 396 DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNL 455
Query: 390 F 390
F
Sbjct: 456 F 456
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 165/400 (41%), Gaps = 41/400 (10%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K P + +Y I++ L + K F + +M NG+E D + ++ VV +
Sbjct: 424 IKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR 483
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNA 127
V++A +VF ++ E G+ ++ ++ +K LC S +FN M K+ ++
Sbjct: 484 VAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSW 543
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
V K G +I ++KE++ ++ L G G+A E V + N
Sbjct: 544 VISSMEKNGEKEKI-HLIKEIQKRS-----NSYCDELNGSGKAEFSQEEELV----DDYN 593
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
C P +A+ +V+ D ++ +LS+ + + R A L + V
Sbjct: 594 C-PQLVQQSALPPALSAVDKMD--VQEICRVLSSSRD-----WERTQEA-LEKSTVQFTP 644
Query: 248 QMFDEMLRHGVLPPTGTITCF--------IKH----------LCSYGPPFAAL-VIYKKA 288
++ E+LRH + + F KH + G F + ++ +
Sbjct: 645 ELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEM 704
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG-- 346
RR GC I+ + + I++M+ + G + ++EM++ G ++ +I+ LC
Sbjct: 705 RRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGR 764
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
+E A E + GF P R + + L + N + A
Sbjct: 765 NVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDA 804
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
+YN M+ + D + +EM N C+ ++ T+T +I+ + +K+ L +F++
Sbjct: 190 GIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEK 249
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
M + G I+ LC G AL YK+ G T + YK+LL ++K K
Sbjct: 250 MRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEK 309
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
+ +I ++M S+ + + Y++ C G+++ A+ ++ E +K C +
Sbjct: 310 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 373 LINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
L+ L +N A ++ + I R L+++ Y
Sbjct: 370 LVKGLCRANRMVDALEI-VDIMKRRKLDDSNVY 401
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 100/270 (37%), Gaps = 3/270 (1%)
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
F ++ + EM G T+ + + GR G + A F MK+ P ++ +
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 198 MIFNFISVN--DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+I + +E + + EM+ + P+ + + L DA D + +
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P T + +I+ LC G AL + Y ++ L + G
Sbjct: 814 IG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
L+ M+E G V VY +I QLE + ++ + PS + Y+ +I
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ E A+ F ++ + + + Y
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTY 962
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 173/420 (41%), Gaps = 38/420 (9%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
A+ +Y ++ A G + + V + M NGV DL+ +IV+ ++ SKA
Sbjct: 208 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 267
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK--------VAF---- 120
+ F + + DT N+++ CL + A +FNSM+ K V F
Sbjct: 268 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 327
Query: 121 --------------------------NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
N+ +YNA+ G ++ G V+ +++ +G+
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
PD ++ L GR+ + +A EVF M++ +P+ YNA+I + S E ++
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+ +M + +PN+ + ++ A R +K V+ + G+ T I +
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
A+ +Y+ R+ + IL+ ++ K ++ +EM++ EV
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
Y ++ GQ+ A + + G P + Y+ +++ S +A +LFL+++
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 157/361 (43%), Gaps = 3/361 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y ++ A G F + + + R M +G++ +++ + ++ + R+ V
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
G+N +T A N + + + A +++ SM K KV + T+ + G +
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
++ E +KEME + + L + G++ EA +F MK C+PD Y
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+M+ + + + + + + EM +N EP+ + ++ A + + + + D ++R
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD-LMR 662
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFA-ALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+P TG + I C+ + A+ + + ++S+ +L K GK
Sbjct: 663 EKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVE 722
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
++ ++ ++ G +++ Y ++ L +G + V+E G PS +Y +I
Sbjct: 723 AMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
Query: 375 N 375
+
Sbjct: 783 S 783
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 154/394 (39%), Gaps = 11/394 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV-RAGHVSKAIQV 75
D G + V V G RK + R R+ VE D V V R +++ +V
Sbjct: 41 DRGEHEVSVNIGGLRK-----ADIPRRYRIR-VENDRFQKDWSVSEVVDRLMALNRWEEV 94
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVAT--YNAVAGGWS 133
G LN + VL++ L R + +VF MK + + YN + +
Sbjct: 95 DGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHA 154
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
+ ++ + EM+ PD T+ + GRAG+ A + M P +
Sbjct: 155 RHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS 214
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
YN +I S ++ E ++ +M N P+L T+ +++A R+ AL F+ M
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR--RSGCTISMEAYKILLMRLSKLG 311
V P T T I L G AL ++ R R+ C + + ++ S G
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
+ ++E M G ++ Y ++ G A+ V+ + G P + Y+
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 372 KLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
L+N S +A ++FL ++ R N Y
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 9/310 (2%)
Query: 92 NVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA 150
N++++ + V A +F M K + TY+A+ + G++ +M +M
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 151 DGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDE 210
+AP +T+ + G +G EA EV M + PD +N ++ + S + +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML--RHGVLPPTGTITCF 268
+ Y+ M P+ T+ II L + + AL +F+ M R P T T
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
+ G +++ G ++ +Y L+ + G GT L++ ++++ G
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 329 SSDVEVYEYIISGLC---NIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
DV Y +++ G+ + L+M + K P+ + Y+ LI+ +
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSNGFLAE 443
Query: 386 AYKLFLKIKH 395
A ++F +++
Sbjct: 444 AVEIFRQMEQ 453
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 170/401 (42%), Gaps = 8/401 (1%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
++ FN A + + +Y V++ L R K F + +L M+ + ++
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDT-EALNVLLKCLCERSHVGAASSVFNSMKGKVA 119
F R+ K +++F + + + + A++ L L + V + + K +
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 120 F--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA-PDCTTFGVFLEGLGRAGRMDEA 176
N +N + K G N V++EM+ G++ P+ T+ ++ L R EA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 177 FEVFCSM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT 235
E+F M + PD +N MI F + + K + M N C PN+ Y+ ++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTI 295
+ K+ +A Q FDE+ + G+ T T + C G A+ + + + S C
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 296 SMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
Y ++L LS G+ L + ++ G + Y I++ LC G+LE AV +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 356 EEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL---FLKI 393
+G P +++L+ +L +S E ++ FL+I
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRI 472
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/328 (18%), Positives = 129/328 (39%), Gaps = 40/328 (12%)
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVA-FNVATYNAVAGGWSKFGRFNEI 141
G N + +VLL L A ++ + MK + F + + + +S+ +++
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKV 143
Query: 142 ERVMKEMEADG-VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER-NCQPDTAVYNAMI 199
+ ++ V P L L +G ++ + ++ K QP+T ++N ++
Sbjct: 144 MEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILV 203
Query: 200 FNFISVNDFDECMKYYNEM-LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML-RHG 257
+ D + EM S PN TY+ ++ L + +A+++F++M+ + G
Sbjct: 204 KHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEG 263
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P T I C G ++A++
Sbjct: 264 ISPDPVTFNVMINGFCRAGE-------VERAKK--------------------------- 289
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
I + M++ G + +V Y +++G C +G+++ A +E G + Y+ L+N
Sbjct: 290 -ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 378 LDSNNAERAYKLFLKIKHARSLENARNY 405
+ + A KL ++K +R + Y
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTY 376
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 173/420 (41%), Gaps = 38/420 (9%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
A+ +Y ++ A G + + V + M NGV DL+ +IV+ ++ SKA
Sbjct: 76 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKA 135
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK--------VAF---- 120
+ F + + DT N+++ CL + A +FNSM+ K V F
Sbjct: 136 LSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM 195
Query: 121 --------------------------NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
N+ +YNA+ G ++ G V+ +++ +G+
Sbjct: 196 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 255
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
PD ++ L GR+ + +A EVF M++ +P+ YNA+I + S E ++
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+ +M + +PN+ + ++ A R +K V+ + G+ T I +
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
A+ +Y+ R+ + IL+ ++ K ++ +EM++ EV
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 435
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
Y ++ GQ+ A + + G P + Y+ +++ S +A +LFL+++
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 157/361 (43%), Gaps = 3/361 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y ++ A G F + + + R M +G++ +++ + ++ + R+ V
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
G+N +T A N + + + A +++ SM K KV + T+ + G +
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
++ E +KEME + + L + G++ EA +F MK C+PD Y
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+M+ + + + + + + EM +N EP+ + ++ A + + + + D ++R
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD-LMR 530
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFA-ALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+P TG + I C+ + A+ + + ++S+ +L K GK
Sbjct: 531 EKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVE 590
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
++ ++ ++ G +++ Y ++ L +G + V+E G PS +Y +I
Sbjct: 591 AMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 650
Query: 375 N 375
+
Sbjct: 651 S 651
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 2/261 (0%)
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
EM+ PD T+ + GRAG+ A + M P + YN +I S
Sbjct: 36 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 95
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
++ E ++ +M N P+L T+ +++A R+ AL F+ M V P T T
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 267 CFIKHLCSYGPPFAALVIYKKAR--RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
I L G AL ++ R R+ C + + ++ S G+ ++E M
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
G ++ Y ++ G A+ V+ + G P + Y+ L+N S
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 385 RAYKLFLKIKHARSLENARNY 405
+A ++FL ++ R N Y
Sbjct: 276 KAKEVFLMMRKERRKPNVVTY 296
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 9/310 (2%)
Query: 92 NVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA 150
N++++ + V A +F M K + TY+A+ + G++ +M +M
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 151 DGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDE 210
+AP +T+ + G +G EA EV M + PD +N ++ + S + +
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML--RHGVLPPTGTITCF 268
+ Y+ M P+ T+ II L + + AL +F+ M R P T T
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
+ G +++ G ++ +Y L+ + G GT L++ ++++ G
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 329 SSDVEVYEYIISGLC---NIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
DV Y +++ G+ + L+M + K P+ + Y+ LI+ +
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK---PNVVTYNALIDAYGSNGFLAE 311
Query: 386 AYKLFLKIKH 395
A ++F +++
Sbjct: 312 AVEIFRQMEQ 321
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+YN MI N D+ + EM C+P+ +TY +I A R + A+ + D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC-------TISMEAYK----- 301
LR + P T I S G AL + KK +G I + AYK
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 302 -----------------------ILLMRLSKLGKCGTLLNIWEEMQE--GGYSSDVEVYE 336
I++ LSKLG+ L+++ M+E DV +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
I+ G++EN V E + +G P+ + Y+ L+
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 132/326 (40%), Gaps = 1/326 (0%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W+ + + SY +++K + M ++ +M +G ++++ S
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSC 194
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
AG +A+ F + N +L L V+ M + + +V
Sbjct: 195 GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDV 254
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TYN + + G+ + +R+ EM DG +PD T+ + L LG+ + A
Sbjct: 255 LTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNH 314
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
MKE P Y +I + + C + +EM+ C P++ YT +IT + +
Sbjct: 315 MKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ A +MF EM G LP T I+ LC G A + K+ GC + Y
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGY 328
L+ L K GK + EM + G+
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%)
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
V +Y+ + +++ G + + R++ EM DG TF + + G AG +A F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
K N +P YNA++ + + V + Y +ML + P++ TY ++ R
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
K+ ++FDEM R G P + T + L P AAL + G S+ Y
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
L+ LS+ G +EM + G DV Y +I+G G+L+ A + E K
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 362 GFCPSRLVYSKLINKL 377
G P+ Y+ +I L
Sbjct: 389 GQLPNVFTYNSMIRGL 404
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 7/309 (2%)
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK 117
+++ F G ++ + + G N+L+ C C + + A +V MK K
Sbjct: 154 LLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI-CSCGEAGL-AKQAVVQFMKSK 211
Query: 118 VAFNV----ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
FN +YNA+ ++ IE V K+M DG +PD T+ + L R G+M
Sbjct: 212 -TFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
D +F M PD+ YN ++ N + N M +P++ YT +
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I L R + DEM++ G P T I G A ++++ G
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
++ Y ++ L G+ + +EM+ G + + VY ++S L G+L A
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 354 VMEEALHKG 362
V+ E + KG
Sbjct: 451 VIREMVKKG 459
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 37/340 (10%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D +I++ G KA+++ G ++ G D N L++ C+ + + AS +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 112 NSMK-GKV-AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
+K G V + +V TY ++ G+ K G+ E ++ +M G+ P TF V ++G +
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
AG M A E+ M C PD + ++I + V + + + EM + PN T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR 289
Y+ +I AL +++ A ++ ++ ++P PF
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQ----------------PFM--------- 419
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
Y ++ K GK I EEM++ D + +I G C G++
Sbjct: 420 ----------YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
AV + + + G P ++ S L++ LL + A+ AY L
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 149/364 (40%), Gaps = 3/364 (0%)
Query: 24 IVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELG 83
+VK L F ++N + +++ S +AG A Q+F + G
Sbjct: 75 VVKKLDNNPHIGFRFWEFSRFKLN-IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG 133
Query: 84 MNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIER 143
++ + L L+ E+ + A+++ +V N++ K R + +
Sbjct: 134 VSPNNRLLGFLVSSFAEKGKLHFATALL-LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMK 192
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
+ E D TF + + GL G+ ++A E+ M C+PD YN +I F
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC 252
Query: 204 SVNDFDECMKYYNEMLSND-CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPT 262
N+ ++ + + ++ S C P++ TYT +I+ + K+ +A + D+MLR G+ P
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 263 GTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEE 322
T + G A I K GC + + L+ ++G+ +WEE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 323 MQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNN 382
M G + Y +I+ LCN +L A ++ + K P +Y+ +I+ +
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 383 AERA 386
A
Sbjct: 433 VNEA 436
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGV-EADLLMLSIVVDSFVRAGHVSKAIQV 75
DI +Y +++ + + + +D++ V D++ + ++ + +AG + +A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSK 134
++ LG+ NVL+ + + A + M F +V T+ ++ G+ +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G+ ++ R+ +EM A G+ P+ T+ + + L R+ +A E+ + ++ P +
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
YN +I F +E EM C+P+ T+T +I + ++ +A+ +F +M+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
G P T++ + L G A + + AR+
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 145/340 (42%), Gaps = 37/340 (10%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D +I++ G KA+++ G ++ G D N L++ C+ + + AS +F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 112 NSMK-GKV-AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
+K G V + +V TY ++ G+ K G+ E ++ +M G+ P TF V ++G +
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
AG M A E+ M C PD + ++I + V + + + EM + PN T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR 289
Y+ +I AL +++ A ++ ++ ++P PF
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQ----------------PFM--------- 419
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
Y ++ K GK I EEM++ D + +I G C G++
Sbjct: 420 ----------YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
AV + + + G P ++ S L++ LL + A+ AY L
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 149/364 (40%), Gaps = 3/364 (0%)
Query: 24 IVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELG 83
+VK L F ++N + +++ S +AG A Q+F + G
Sbjct: 75 VVKKLDNNPHIGFRFWEFSRFKLN-IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDG 133
Query: 84 MNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIER 143
++ + L L+ E+ + A+++ +V N++ K R + +
Sbjct: 134 VSPNNRLLGFLVSSFAEKGKLHFATALL-LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMK 192
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
+ E D TF + + GL G+ ++A E+ M C+PD YN +I F
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC 252
Query: 204 SVNDFDECMKYYNEMLSND-CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPT 262
N+ ++ + + ++ S C P++ TYT +I+ + K+ +A + D+MLR G+ P
Sbjct: 253 KSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 263 GTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEE 322
T + G A I K GC + + L+ ++G+ +WEE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 323 MQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNN 382
M G + Y +I+ LCN +L A ++ + K P +Y+ +I+ +
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 383 AERA 386
A
Sbjct: 433 VNEA 436
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGV-EADLLMLSIVVDSFVRAGHVSKAIQV 75
DI +Y +++ + + + +D++ V D++ + ++ + +AG + +A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSK 134
++ LG+ NVL+ + + A + M F +V T+ ++ G+ +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G+ ++ R+ +EM A G+ P+ T+ + + L R+ +A E+ + ++ P +
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
YN +I F +E EM C+P+ T+T +I + ++ +A+ +F +M+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
G P T++ + L G A + + AR+
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 171/388 (44%), Gaps = 3/388 (0%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P+++ +Y I+KA+ ++ S + +L DM+ NG+ + + + +V + + G + +A Q
Sbjct: 238 PDNV-TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQ 296
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWS 133
+ + + + D N+L+ LC + + ++MK K+ +V TYN + G
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE-RNCQPDT 192
+ G E ++M++ME DGV + T + L+ L + + + + + PD
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI 416
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
Y+ +I ++ V D ++ EM + N T I+ AL + RK+ +A + +
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNS 476
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
+ G + T I AL ++ + ++ T ++ + L+ L GK
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
+ ++E+ E G D + II G C G++E A E++ F P +
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596
Query: 373 LINKLLDSNNAERAYKLFLKIKHARSLE 400
L+N L E+A F + R ++
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEEREVD 624
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 155/381 (40%), Gaps = 4/381 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
LP D+ +Y +++ L + ++ M+ ++ D++ + ++D G +A
Sbjct: 307 LP-DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGG 131
++ + G+ + N+ LK LC+ A + + F ++ TY+ +
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ K G + +M+EM G+ + T L+ L + ++DEA + S +R D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
Y +I F ++ ++ ++EM P + T+ +I L K A++ FD
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFD 545
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
E+ G+LP T I C G A Y ++ + ILL L K G
Sbjct: 546 ELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG 605
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
LN + + E D Y +IS C +L+ A ++ E KG P R Y+
Sbjct: 606 MTEKALNFFNTLIE-EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 372 KLINKLLDSNNAERAYKLFLK 392
I+ L++ +L K
Sbjct: 665 SFISLLMEDGKLSETDELLKK 685
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 160/357 (44%), Gaps = 5/357 (1%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
++ N + + L++ +V + + +S A +VF ++ ++G++ + + NVL+ C
Sbjct: 162 LKPNLLTCNTLLIGLV--RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 104 VGAASSVFNSMKG--KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
+ A + M KV + TYN + SK GR ++++ ++ +M+ +G+ P+ T+
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ G + G + EAF++ MK+ N PD YN +I + E ++ + M S
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
+P++ TY +I ++A ++ ++M GV T +K LC A
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 282 LVIYKK-ARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIIS 340
K+ G + + Y L+ K+G L + EM + G + I+
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Query: 341 GLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
LC +L+ A ++ A +GF + Y LI E+A +++ ++K +
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
+ ++ ++ L M ++ +G+ D + ++ + + G V KA + +
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGR 137
+ D N+LL LC+ A + FN++ + + TYN + + K +
Sbjct: 581 ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKK 640
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV-------FCSMKERNCQP 190
E ++ EME G+ PD T+ F+ L G++ E E+ F SMK R+ Q
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMK-RDLQV 699
Query: 191 DT 192
+T
Sbjct: 700 ET 701
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 162/373 (43%), Gaps = 6/373 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
S+ +++ ++ F GV +M G+ +I + + G + A ++ ++
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRF 138
D + N L+ + AS +F+ ++ G + ++ TYN + G + G
Sbjct: 370 AA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+R+ +EM + PD T+ ++G + G + A EV+ M + +PD Y
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCE-PNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
+ + D D+ + + EM++ D P+L Y I L + +V A++ ++ R G
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
++P T T I+ G A +Y + R S+ Y +L+ +K G+
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
EM++ G +V + ++ G+C G ++ A + + +G P++ Y+ LI+K
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKN 665
Query: 378 LDSNNAERAYKLF 390
D E KL+
Sbjct: 666 CDFEKWEEVVKLY 678
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 4/364 (1%)
Query: 43 DMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERS 102
DMR +G + +++ + + G A V + G+ T N+ + LC+
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 103 HVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+ A + +SM A +V +YN + G+ K G+F E + ++ A + P T+
Sbjct: 358 RIDDARELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++GL +G ++ A + M + PD Y ++ F+ + + Y+EML
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI-TCFIKHLCSYGPPFAA 281
+P+ YT LR A ++ +EM+ P TI I LC G A
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ +K R G Y ++ + G+ N+++EM V Y +I G
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLEN 401
G+LE A E +G P+ + ++ L+ + + N + AY+ K++ N
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 402 ARNY 405
+Y
Sbjct: 655 KYSY 658
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 137/338 (40%), Gaps = 2/338 (0%)
Query: 42 RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
R++ + D++ + ++ +++ G +A +F +L ++ N L+ LCE
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 102 SHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTF 160
++ A + M ++ F +V TY + G+ K G + V EM G+ PD +
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 161 GVFLEGLGRAGRMDEAFEVFCSMKERNCQ-PDTAVYNAMIFNFISVNDFDECMKYYNEML 219
G R G D+AF + M + PD +YN I V + + +++ ++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
P+ TYT +I L + A ++DEMLR + P T I G
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 280 AALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
A + ++ G ++ + LL + K G +M+E G + Y +I
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 340 SGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
S C+ + E V + +E L K P + L L
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 4/252 (1%)
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
N+ V + M G+ P TF L+ +AG ++ +++ MK RN + YN +
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I F +E +++ +M + ++ +I ++ DA + DEML G+
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T T +I LC +G A ++ S + +Y L+ K+GK
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
++++++ G + Y +I GLC G LE A + EE + P + Y+ L+ +
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 379 DSNNAERAYKLF 390
+ N A +++
Sbjct: 456 KNGNLSMATEVY 467
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 154/401 (38%), Gaps = 19/401 (4%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVL-RDMRVNGVEADLLMLSIVVDS 62
FFNW + + + ++ +++ L S V R + + E D L++ D
Sbjct: 105 FFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDK 164
Query: 63 -------------FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
+ + K + F + G N++LK L + + AS+
Sbjct: 165 LIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASA 224
Query: 110 VFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
V+ +M + + V T+N + K G ++++ EM+ + T+ + + G
Sbjct: 225 VYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFS 284
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
+ G+M+EA M+ +N +I + FD+ +EML+ P
Sbjct: 285 KNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
TY I AL ++ DA ++ M V+ + +IK G A +++
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIK----MGKFVEASLLFDDL 400
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
R S+ Y L+ L + G + EEM DV Y ++ G G L
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
A V +E L KG P Y+ L ++++A++L
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y +VK + S V +M G++ D + +R G KA ++
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 77 GNLNELGMNR-DTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWS 133
+ + D NV + LC+ ++ A F +V + TY V G+
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
+ G+F + EM + P T+ V + G +AGR+++AF+ MK+R +P+
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+NA+++ + DE +Y +M PN +YT +I+ K + ++++ EM
Sbjct: 622 THNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Query: 254 LRHGVLPPTGTITCFIKHL 272
L + P T KHL
Sbjct: 682 LDKEIEPDGYTHRALFKHL 700
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 151/369 (40%), Gaps = 13/369 (3%)
Query: 45 RVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHV 104
R GV D + +++ F + V +A ++F ++ N D N ++ LC V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 105 GAASSVFNSMKGK---VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
A +V + M K V NV +Y + G+ +E V +M + G+ P+ T+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKE--RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
++GL A R DE ++ + PD +N +I D MK + EML
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL-------PPTGTITCFIKHL 272
+ P+ +Y+ +I L R + A +F+E+ VL P ++L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDV 332
C+ G A ++++ + G +YK L+ + GK + M + D+
Sbjct: 441 CANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
E YE +I GL IG+ A ++ L + P + ++ +L A ++ L
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 559
Query: 393 IKHARSLEN 401
+ R +N
Sbjct: 560 MLEKRIRQN 568
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 189/455 (41%), Gaps = 57/455 (12%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFS----FMMGVLRDMRVNG-VEADLLMLSI 58
FF+W V + S+ ++++ LGR + + F+ + R R NG V+ +
Sbjct: 87 FFDW-VSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIER--RSNGCVKLQDRYFNS 143
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK- 117
++ S+ AG +++++F + ++G++ N LL L +R G A +F+ M+
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 118 -VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
V + T+N + G+ K +E R+ K+ME PD T+ ++GL RAG++ A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 177 FEVFCSM--KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
V M K + P+ Y ++ + + DE + +++MLS +PN TY +I
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 235 TALL---RRRKVVD----------------------------------ALQMFDEMLRHG 257
L R ++ D A+++F EML
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKA-------RRSGCTISMEAYKILLMRLSKL 310
+ P + + + I+ LC A ++ + + C AY + L
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 443
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
GK ++ ++ + G D Y+ +I+G C G+ + A ++ L + F P Y
Sbjct: 444 GKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETY 502
Query: 371 SKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
LI+ LL A A+ ++ + L A +
Sbjct: 503 ELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF 537
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 153/363 (42%), Gaps = 19/363 (5%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL--NELGMNRDTEALNVLLKC 97
+ +DM + D++ + ++D RAG V A V + ++ + + L++
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRG 290
Query: 98 LCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVM--KEMEADGVA 154
C + + A VF+ M + + N TYN + G S+ R++EI+ ++ A
Sbjct: 291 YCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA 350
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
PD TF + ++ AG +D A +VF M PD+A Y+ +I N+FD
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 215 YNEML-------SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
+NE+ ++C+P Y + L K A ++F ++++ GV P T
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTL 470
Query: 268 FIKHLCSYG---PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
H C G P + LV+ R +E Y++L+ L K+G+ + + M
Sbjct: 471 ITGH-CREGKFKPAYELLVL---MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML 526
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
Y + +++ L + ++ L K + + ++++ L S E
Sbjct: 527 RSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKE 586
Query: 385 RAY 387
+A+
Sbjct: 587 KAF 589
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 143/356 (40%), Gaps = 20/356 (5%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL+ +R+ V AD L D G K F L LG R+ L +
Sbjct: 71 VLQTLRLIKVPADGLRF---FDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIE 127
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
RS+ G V +N++ + G F E ++ + M+ G++P T
Sbjct: 128 RRSN------------GCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLT 175
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKER-NCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
F L L + GR A ++F M+ PD+ +N +I F + DE + + +M
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM 235
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG--VLPPTGTITCFIKHLCSYG 276
C P++ TY II L R KV A + ML+ V P + T ++ C
Sbjct: 236 ELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQ 295
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEG--GYSSDVEV 334
A++++ G + Y L+ LS+ + + +I + ++ D
Sbjct: 296 EIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACT 355
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ +I C+ G L+ A+ V +E L+ P YS LI L N +RA LF
Sbjct: 356 FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 153/368 (41%), Gaps = 1/368 (0%)
Query: 39 GVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
++R+M G++A + + ++D + K + VF L E G L+
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 99 CERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
+ + A V MK + V N+ TY+ + G+ K + V ++M +G+ PD
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ + G MD A + M++ +P T + +I + D ++ ++
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
M C P + T+ +I L+ +R++ A+++ DEM GV T T ++ S G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A + + + G + + Y+ LL K G+ + L + +EM + VY
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+I G G + A ++++ +G P Y+ I+ + + RA + +++
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 398 SLENARNY 405
N + Y
Sbjct: 795 VKPNIKTY 802
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 164/413 (39%), Gaps = 42/413 (10%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y ++ A + + +R M+ G+E L+ S++V F +AGH A F
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 81 ELGMNRDTEALNVLLKCLC---------------ERSHVGAASSVFNSM----------- 114
+ + ++ C E + A +++++M
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 115 KGKVAF----------NVATYNAVAGGWSKFGRFN---EIERVMKEMEADGVAPDCTTFG 161
KG V F V TY + ++K G+ + E+ RVMKE +GV + T+
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE---EGVKHNLKTYS 523
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ + G + AF VF M + +PD +YN +I F + + D ++ EM
Sbjct: 524 MMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL 583
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
P T+ II + + +L++FD M R G +P T I L A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
+ I + +G + + Y ++ + +G G + +Q G D+ YE ++
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
C G++++A+ V +E + + VY+ LI+ + A L ++K
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK 756
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 148/356 (41%), Gaps = 1/356 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V + ++ G ++ +++ + + G +SKA++V + E G+ + + ++++
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 100 ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ A +VF M K + +V YN + + G + + +KEM+ P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
TF + G ++G M + EVF M+ C P +N +I + ++ ++ +EM
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
N TYT+I+ A + F + G+ T +K C G
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
+AL + K+ + Y IL+ ++ G ++ ++M++ G D+ Y
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
IS G + A +EE G P+ Y+ LI ++ E+A + ++K
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 156/399 (39%), Gaps = 45/399 (11%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + ++ +Y +++ + K ++ V DM G++ D+++ + ++ +F G+
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 69 VSKAIQVFGNLNEL--------------------GMNRDTEALNVLLKCLC--------- 99
+ +AIQ + +L M R E +++ +C C
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 100 ------ERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
E+ + A + + M V+ N TY + G++ G + ++ +G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+ D T+ L+ ++GRM A V M RN ++ VYN +I + D E
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
+M +P++ TYT I+A + + A Q +EM GV P T T IK
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 273 CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT------LLNIWEEMQEG 326
P AL Y++ + G Y LL L ++ I +EM E
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEA 869
Query: 327 GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
G D+ + LC I E + + E L K F P
Sbjct: 870 GLIVDMGTAVHWSKCLCKI---EASGGELTETLQKTFPP 905
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/376 (18%), Positives = 151/376 (40%), Gaps = 1/376 (0%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
+ ++VK GRR MR G+ + + ++ ++ + +A+ +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFN 139
E G+ +V++ + H AA F+ K N + Y + +
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
E +++EME +G+ + ++G + VF +KE P Y +I
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
+ V + ++ M + NL TY+ +I ++ + +A +F++M++ G+
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
P I C G A+ K+ ++ + + ++ +K G L +
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
++ M+ G V + +I+GL Q+E AV +++E G + Y+K++
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 380 SNNAERAYKLFLKIKH 395
+ +A++ F ++++
Sbjct: 672 VGDTGKAFEYFTRLQN 687
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 35/286 (12%)
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
P T FG+ ++ GR G M A E F M+ R P + +Y ++I + D DE +
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR-HGVLPPT--GTI------ 265
+M E +L TY+ I+ + A FDE R H L + G I
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 266 TC-------FIKHLCSYG--PPFA-----------------ALVIYKKARRSGCTISMEA 299
TC ++ + G P A LV++K+ + G T ++
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ +K+GK L + M+E G +++ Y +I+G + NA V E+ +
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+G P ++Y+ +I+ N +RA + +++ R R +
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 1/339 (0%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P D+ +Y +++ + + +D NG ++ +++V+ R ++AI+
Sbjct: 206 PPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE 265
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS-MKGKVAFNVATYNAVAGGWS 133
V ++ G D N L+ C R ++ +SV + + N TYN +
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
++E+E ++ M P T+ + + GL +A + A + F M E+ C PD
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
YN ++ D+ ++ + + C P L TY +I L ++ + AL+++ +M
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
L G+ P T I C A + K+ G I Y++++ L K +
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
+ + E M GG D +Y I+ G+ +G AV
Sbjct: 506 EMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 159/382 (41%), Gaps = 4/382 (1%)
Query: 10 KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
+H +P S +V+ L R M +LR M ++G D + ++++ + + GH+
Sbjct: 132 RHNQVPH-FPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHI 190
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF-NSMKGKVAFNVATYNAV 128
A+ + +++ G D N +++C+ + + A + + ++ + TY +
Sbjct: 191 RTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVL 250
Query: 129 AGGWSKF-GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
++ G IE V+++M +G PD T+ + R G ++E V +
Sbjct: 251 VELVCRYCGSARAIE-VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
+ +T YN ++ + S +DE + N M P + TY +I L + R + A+
Sbjct: 310 LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
F +ML LP T + + G A+ + + + C + Y ++ L
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGL 429
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
+K G L ++ +M + G D +I G C +E A V++E ++G
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG 489
Query: 368 LVYSKLINKLLDSNNAERAYKL 389
Y +I L E A ++
Sbjct: 490 STYRLVIQGLCKKKEIEMAIEV 511
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 110/282 (39%)
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
T N + G+ + ++++ M P + + GL R ++D+A + M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
PDT YN +I N + +M + P++ TY +I +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A++ + + L++G P T T ++ +C Y A+ + + GC + Y L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ + G + ++ + + G + Y ++ LC+ + ++ +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
CP+ + Y+ LIN L + RA F ++ + L + Y
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%)
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D N ++ N S + K M ++ P+ + + ++ L R ++ A+ +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
M+ G +P T T I +LC G ALV+ + SG + Y ++ +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
G + W++ + G + Y ++ +C A+ V+E+ +G P + Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 371 SKLIN 375
+ L+N
Sbjct: 283 NSLVN 287
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 169/390 (43%), Gaps = 2/390 (0%)
Query: 7 WAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
W V ++ +Y +V L R++ + LR + ++ + ++ + +
Sbjct: 176 WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATY 125
G V A F + + G+ + N+L+ LC + A + + M K V + TY
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 126 NAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
N +A G+ G + V+++M G++PD T+ + L G + G +D + M
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 186 RNCQPDTAV-YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
R + ++ + + M+ DE + +N+M ++ P+L Y+ +I L + K
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
AL ++DEM +LP + T + LC G A + SG T+ + Y I++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
+K G L +++ + E G + V + +I G C + A +++ G
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 365 PSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
PS + Y+ L++ + N + +L ++K
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 138/353 (39%), Gaps = 13/353 (3%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
+ + M+ +G+ DL+ SIV+ + G A+ ++ + + + ++ LL
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 98 LCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC++ + A S+ +S+ ++ YN V G++K G E + K + G+ P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TF + G + + EA ++ +K P Y ++ + + + +
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 217 EMLSNDCEPNLDTYTRIITAL------------LRRRKVVDALQMFDEMLRHGVLPPTGT 264
EM + P TY+ I L LR R Q +M G+ P T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
I++LC A V + + S Y IL+ L G + +Q
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
E S Y +I C G E AV + + LH+GF S YS +IN+L
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 174/411 (42%), Gaps = 22/411 (5%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGV--LRDMRVNGVEAD-LLMLSIVVDSFVRAGHV 69
L D+ +Y +++ G+ + + MG+ L+DM G E + ++ S+++ + G +
Sbjct: 322 GLSPDVITYTILL--CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAV 128
+A+ +F + G++ D A ++++ LC+ A +++ M K + N T+ A+
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 129 AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
G + G E ++ + + G D + + ++G ++G ++EA E+F + E
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR--RRKVVDA 246
P A +N++I+ + + E K + + P++ +YT ++ A K +D
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLC-SYGPPFAALV----IYKKARR-------SGCT 294
L+ EM G+ P T + K LC + V I++K ++ G
Sbjct: 560 LRR--EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 295 ISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLV 354
Y ++ L ++ E M+ + Y +I LC G + A
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 355 MEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ + S+ Y+ LI + E A KLF ++ H + R+Y
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 139/367 (37%), Gaps = 45/367 (12%)
Query: 39 GVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
G R G+ D+L+ + S +R V ++ + + + +N T++ N +L
Sbjct: 115 GTFRKWESTGLVWDMLLF---LSSRLRM--VDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169
Query: 99 CERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
E + V+ +K K N TY+ V G + + + ++ E + P
Sbjct: 170 RETDKMW---DVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
+F + G + G +D A FC++ + P +N +I V E ++ ++M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ EP+ TY + + A ++ +ML G+ P T T + C G
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
LV+ K G L+ + C +L
Sbjct: 344 DMGLVLLKDMLSRG------------FELNSIIPCSVML--------------------- 370
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARS 398
SGLC G+++ A+ + + G P + YS +I+ L + A L+ ++ R
Sbjct: 371 -SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 399 LENARNY 405
L N+R +
Sbjct: 430 LPNSRTH 436
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 137/327 (41%), Gaps = 50/327 (15%)
Query: 111 FNSMKGKVAFNVATYNAVAGGWSKFG--RFNEIERVMKEM-EADGVAPDCTTFGVFLEGL 167
F ++ AF ++++ + G RF E++ +++++ + +G + G+ + L
Sbjct: 71 FKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDML 130
Query: 168 ----GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
R +D++ + MK++N T YN+++++F + D+ Y E+
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIK---- 183
Query: 224 EPNLDTYTRIITALLRRRKVVDAL-----------------------------------Q 248
+ N TY+ ++ L R++K+ DA+
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 249 MFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLS 308
F +L+ G++P + I LC G AL + + G Y IL
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 309 KLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRL 368
LG + +M + G S DV Y ++ G C +G ++ ++++++ L +GF + +
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 369 V-YSKLINKLLDSNNAERAYKLFLKIK 394
+ S +++ L + + A LF ++K
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMK 390
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 110/283 (38%), Gaps = 48/283 (16%)
Query: 39 GVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
+L + +G D+++ +IV+D + ++G + +A+++F + E G+ N L+
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 99 CERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGR---FNEIERVMK-------- 146
C+ ++ A + + +K +A +V +Y + ++ G +E+ R MK
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 147 ------------------------------------EMEADGVAPDCTTFGVFLEGLGRA 170
+ME++G+ PD T+ ++ L R
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
+ AF MK RN +A YN +I + + + + + + Y
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
T +I A + A+++F ++L G + I LC
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 169/390 (43%), Gaps = 2/390 (0%)
Query: 7 WAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
W V ++ +Y +V L R++ + LR + ++ + ++ + +
Sbjct: 176 WDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATY 125
G V A F + + G+ + N+L+ LC + A + + M K V + TY
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 126 NAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
N +A G+ G + V+++M G++PD T+ + L G + G +D + M
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 186 RNCQPDTAV-YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
R + ++ + + M+ DE + +N+M ++ P+L Y+ +I L + K
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
AL ++DEM +LP + T + LC G A + SG T+ + Y I++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
+K G L +++ + E G + V + +I G C + A +++ G
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 365 PSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
PS + Y+ L++ + N + +L ++K
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 138/353 (39%), Gaps = 13/353 (3%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
+ + M+ +G+ DL+ SIV+ + G A+ ++ + + + ++ LL
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 98 LCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC++ + A S+ +S+ ++ YN V G++K G E + K + G+ P
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TF + G + + EA ++ +K P Y ++ + + + +
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 217 EMLSNDCEPNLDTYTRIITAL------------LRRRKVVDALQMFDEMLRHGVLPPTGT 264
EM + P TY+ I L LR R Q +M G+ P T
Sbjct: 563 EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQIT 622
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
I++LC A V + + S Y IL+ L G + +Q
Sbjct: 623 YNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQ 682
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
E S Y +I C G E AV + + LH+GF S YS +IN+L
Sbjct: 683 EQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 174/411 (42%), Gaps = 22/411 (5%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGV--LRDMRVNGVEAD-LLMLSIVVDSFVRAGHV 69
L D+ +Y +++ G+ + + MG+ L+DM G E + ++ S+++ + G +
Sbjct: 322 GLSPDVITYTILL--CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAV 128
+A+ +F + G++ D A ++++ LC+ A +++ M K + N T+ A+
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 129 AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
G + G E ++ + + G D + + ++G ++G ++EA E+F + E
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR--RRKVVDA 246
P A +N++I+ + + E K + + P++ +YT ++ A K +D
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLC-SYGPPFAALV----IYKKARR-------SGCT 294
L+ EM G+ P T + K LC + V I++K ++ G
Sbjct: 560 LRR--EMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 295 ISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLV 354
Y ++ L ++ E M+ + Y +I LC G + A
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 355 MEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ + S+ Y+ LI + E A KLF ++ H + R+Y
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDY 728
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 139/367 (37%), Gaps = 45/367 (12%)
Query: 39 GVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
G R G+ D+L+ + S +R V ++ + + + +N T++ N +L
Sbjct: 115 GTFRKWESTGLVWDMLLF---LSSRLRM--VDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169
Query: 99 CERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
E + V+ +K K N TY+ V G + + + ++ E + P
Sbjct: 170 RETDKMW---DVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVV 223
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
+F + G + G +D A FC++ + P +N +I V E ++ ++M
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ EP+ TY + + A ++ +ML G+ P T T + C G
Sbjct: 284 NKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
LV+ K G L+ + C +L
Sbjct: 344 DMGLVLLKDMLSRG------------FELNSIIPCSVML--------------------- 370
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARS 398
SGLC G+++ A+ + + G P + YS +I+ L + A L+ ++ R
Sbjct: 371 -SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 399 LENARNY 405
L N+R +
Sbjct: 430 LPNSRTH 436
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 137/327 (41%), Gaps = 50/327 (15%)
Query: 111 FNSMKGKVAFNVATYNAVAGGWSKFG--RFNEIERVMKEM-EADGVAPDCTTFGVFLEGL 167
F ++ AF ++++ + G RF E++ +++++ + +G + G+ + L
Sbjct: 71 FKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDML 130
Query: 168 ----GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
R +D++ + MK++N T YN+++++F + D+ Y E+
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIK---- 183
Query: 224 EPNLDTYTRIITALLRRRKVVDAL-----------------------------------Q 248
+ N TY+ ++ L R++K+ DA+
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 249 MFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLS 308
F +L+ G++P + I LC G AL + + G Y IL
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 309 KLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRL 368
LG + +M + G S DV Y ++ G C +G ++ ++++++ L +GF + +
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 369 V-YSKLINKLLDSNNAERAYKLFLKIK 394
+ S +++ L + + A LF ++K
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMK 390
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 110/282 (39%), Gaps = 48/282 (17%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L + +G D+++ +IV+D + ++G + +A+++F + E G+ N L+ C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 100 ERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGR---FNEIERVMK--------- 146
+ ++ A + + +K +A +V +Y + ++ G +E+ R MK
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 147 -----------------------------------EMEADGVAPDCTTFGVFLEGLGRAG 171
+ME++G+ PD T+ ++ L R
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
+ AF MK RN +A YN +I + + + + + + YT
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
+I A + A+++F ++L G + I LC
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 1/248 (0%)
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG 116
S +V + + GHVS+A ++F ++ + + ++ +L+ LC A + + +
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 117 K-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
K V + YN V K + + I + ++M+ DG +PD T+ + + GR G +DE
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT 235
A +F ++ +C+PD YN++I D DE + EM P++ TY+ ++
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTI 295
+ +V A +F+EML G P T + L G A+ +Y K ++ G T
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 296 SMEAYKIL 303
Y +L
Sbjct: 616 DSITYTVL 623
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 150/357 (42%), Gaps = 2/357 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y ++++ +GR +G+ +M G+ +++ + ++ + V KAIQVF
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
+ E G + ++LL L + V K + + +Y + SK G
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSY--LVRTLSKLG 386
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+E R+ +M + V + ++ LE L AG+ EA E+ + E+ DT +YN
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+ + + +M + P++ TY +I + R +V +A+ +F+E+ R
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
P + I L G A V +K+ + G + Y L+ K +
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
+++EEM G ++ Y ++ L G+ AV + + +G P + Y+ L
Sbjct: 567 YSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 149/365 (40%), Gaps = 36/365 (9%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK- 117
++ +++R+ SKA V+ + G D A N+LL L + A VF MK +
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE---KACQVFEDMKKRH 265
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ TY + + G+ +E + EM +G+ + + ++ L + +D+A
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 178 EVFCSMKERNCQPD--------------------------------TAVYNAMIFNFISV 205
+VF M E C+P+ +Y+ ++ +
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
E + + +M S + D+Y ++ +L K ++A++M ++ GV+ T
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
L +++K ++ G + + Y IL+ ++G+ +NI+EE++
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
D+ Y +I+ L G ++ A + +E KG P + YS L+ + E
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 386 AYKLF 390
AY LF
Sbjct: 566 AYSLF 570
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 131/319 (41%), Gaps = 39/319 (12%)
Query: 109 SVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGL 167
S+ +SM K V N++T N + G FG +++ ++ ++ + + T+ L+
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGF---FGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAY 213
Query: 168 GRAGRMDEAFEVFC--------------------------------SMKERNCQPDTAVY 195
R+ +AF+V+C MK+R+C+ D Y
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTY 273
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
MI + DE + +NEM++ N+ Y ++ L + + V A+Q+F M+
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P T + + L + G + + ++R ++ Y L+ LSKLG
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR---YMTQGIYSYLVRTLSKLGHVSE 390
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
++ +M + + Y ++ LC G+ A+ ++ + KG ++Y+ + +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 376 KLLDSNNAERAYKLFLKIK 394
L + LF K+K
Sbjct: 451 ALGKLKQISHIHDLFEKMK 469
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
R D + SM + N + + N +I F + D C++ + D + N TY
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKW---DLKMNSFTYK 207
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS 291
++ A LR R A ++ E+ R G I + L + A +++ ++
Sbjct: 208 CLLQAYLRSRDYSKAFDVYCEIRRGG---HKLDIFAYNMLLDALAKDEKACQVFEDMKKR 264
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
C Y I++ + ++GKC + ++ EM G + +V Y ++ L ++ A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLL 378
+ V + G P+ YS L+N L+
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLV 351
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 163/381 (42%), Gaps = 13/381 (3%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F W K +D S +++ LG + F+ ++RDM N + + +++D +
Sbjct: 144 FKWGEKRGC--DDQKSCDLMIWVLGNHQKFNIAWCLIRDM-FNVSKDTRKAMFLMMDRYA 200
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVAT 124
A S+AI+ F +++ EA LL LC H+ A + K +V
Sbjct: 201 AANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEG 260
Query: 125 YNAVAGGWSK-FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
+N + GW + E +R+ +EM + P+ ++ + + G + ++ ++ M
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
K+R P VYN++++ + FDE MK ++ +P+ TY +I L K+
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A + M+ + P T F++ + L + + + S + E + ++
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAFLEAVNFE----KTLEVLGQMKISDLGPTEETFLLI 436
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
L +L K + L IW EM ++ +Y I GL + G LE A + E KGF
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Query: 364 CPSRLVYSKLINKLLDSNNAE 384
V + ++ KLL+ +
Sbjct: 497 -----VGNPMLQKLLEEQKVK 512
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 158/360 (43%), Gaps = 12/360 (3%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQ-VFGNLNELGMNRDTEALNVLLKCLCERSHVGA 106
GV D + + ++ F G V + ++ + G++ D ALNVL+ C+ VG
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCK---VGR 144
Query: 107 ASSVFNSMKGKV-AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
S + ++ +V + + TYN V G + G +E + + EM G+ PD ++ ++
Sbjct: 145 LSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
G + G A + + E N + ++ ++ +++ +E Y +M+ + +P
Sbjct: 205 GFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEEA---YRDMVMSGFDP 257
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
++ T++ II L + KV++ + EM V P T T + L AL +Y
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
+ G + + Y +L+ L K G ++ + E +V Y ++ GLC
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
G L +A ++ + L K P+ + YS +IN + E A L K++ + N Y
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 167/404 (41%), Gaps = 20/404 (4%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMG-VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSK 71
+P D+ SY V++ G KF + MR G+E D+ +I+++S + G
Sbjct: 534 GMPWDVVSYNVLIS--GMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAG 130
++++ + G+ + N+++ LCE + A + N M ++ N+ TY
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
SK R + I + + + + G+ + + L + G +A V M+ R P
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
DT +N+++ + + + + Y+ M+ PN+ TY II L + + +
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
EM G+ P T I G ++ IY + G Y +L+ + +
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQ-------------LENAVLVMEE 357
GK + +EM + G S + Y +ISGLC + E L+ E
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEM 891
Query: 358 ALHKGFCP-SRLVY--SKLINKLLDSNNAERAYKLFLKIKHARS 398
KG+ P ++ +Y S +K +AER K K K+ARS
Sbjct: 892 VEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKKKNARS 935
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 4/389 (1%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSF--MMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
V+ AL ++I +I + +++ + RDM ++G + D++ S +++ +
Sbjct: 213 VRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATY 125
G V + + + E+ + + L+ L + + A ++++ M + + ++ Y
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 126 NAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
+ G K G E E+ K + D P+ T+ ++GL +AG + A + M E
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD 245
++ P+ Y++MI ++ +E + +M + PN TY +I L + K
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 246 ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLM 305
A+++ EM GV + + HL G + K G T+ Y L+
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 306 RLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
K G L EEMQE G DV Y +ISG+ G++ A + KG P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEP 571
Query: 366 SRLVYSKLINKLLDSNNAERAYKLFLKIK 394
++ ++N ++E KL+ K+K
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 152/381 (39%), Gaps = 3/381 (0%)
Query: 25 VKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGM 84
+K +GR K G+++DM GV D + + ++D F + G A+ + E GM
Sbjct: 479 LKRIGRIKEVK---GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 85 NRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERV 144
D + NVL+ + + VGA + + + ++AT+N + K G I ++
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
+M++ G+ P + + + L G+M+EA + M P+ Y +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 205 VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
D K + +LS + + Y +I L + A + +M G +P T T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
+ AL Y +G + ++ Y ++ LS G + EM+
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
G D Y +ISG IG ++ ++ + E + G P Y+ LI++ +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 385 RAYKLFLKIKHARSLENARNY 405
+A +L ++ N Y
Sbjct: 836 QARELLKEMGKRGVSPNTSTY 856
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 131/312 (41%), Gaps = 10/312 (3%)
Query: 6 NWAVK---HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
+WA K + DI ++ +++ + ++ ++ + M+ G++ L+ +IVV
Sbjct: 558 DWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGM 617
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV 122
G + +AI + + + ++ + + L + A ++F + + +++ +
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR---ADAIFKTHETLLSYGI 674
Query: 123 ----ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
YN + K G + VM +MEA G PD TF + G + +A
Sbjct: 675 KLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS 734
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
+ M E P+ A YN +I E K+ +EM S P+ TY +I+
Sbjct: 735 TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQA 794
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
+ + ++ ++ EM+ G++P T T I + G A + K+ + G + +
Sbjct: 795 KIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS 854
Query: 299 AYKILLMRLSKL 310
Y ++ L KL
Sbjct: 855 TYCTMISGLCKL 866
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/390 (17%), Positives = 156/390 (40%), Gaps = 37/390 (9%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ +Y ++ ++ + +LR M V + V+D +AG AI++
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ +G+ + L+ L+ L + + M K V + Y ++ + K
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G +EM+ G+ D ++ V + G+ + G++ + + M+E+ +PD A +
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATF 576
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N M+ + D + +K +++M S +P+L + ++ L K+ +A+ + ++M+
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ P ++ Y+I L SK +
Sbjct: 637 MEIHP-----------------------------------NLTTYRIFLDTSSKHKRADA 661
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ E + G +VY +I+ LC +G + A +VM + +GF P + ++ L++
Sbjct: 662 IFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH 721
Query: 376 KLLDSNNAERAYKLFLKIKHARSLENARNY 405
++ +A + + A N Y
Sbjct: 722 GYFVGSHVRKALSTYSVMMEAGISPNVATY 751
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 166/416 (39%), Gaps = 54/416 (12%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG---VEA---DLLM 55
+ FFNWA + ++ +++ L + + F +LRD+ VNG + A D L+
Sbjct: 99 LEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALL 158
Query: 56 LSI--------VVDSFVRA-GHVSK---AIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
S V DS + H+ K A F + + G E+ N + L +
Sbjct: 159 YSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR 218
Query: 104 VGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVMKEME------------- 149
V A + M+ K++ N T N V G+ + G+ ++ ++++ME
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278
Query: 150 ----------------------ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
G+ P+ TF + G RA ++ EA +VF MK N
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
P+T YN +I + D + ++Y +M+ N + ++ TY +I L ++ K A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
Q E+ + ++P + T + I C +YK RSGC + + + +L+
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ + EM D + +GL + G+ + +++E K F
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%)
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD 245
R C V++++ F + F + +M P +++ +++LL + +V
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 246 ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLM 305
AL+ + EM R + P T+ + C G + + + R G + +Y L+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 306 RLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
+ G + L + M + G +V + +I G C +L+ A V E P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 366 SRLVYSKLINKLLDSNNAERAYKLF 390
+ + Y+ LIN + E A++ +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFY 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 96/266 (36%), Gaps = 35/266 (13%)
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
F + + A + F MK+ P NA + + + D +++Y EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
PN T +++ R K+ +++ +M R G + I C G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 280 AALVIYKKARRSGCTISMEAYKILL------MRLSKLGKC----------------GTLL 317
+AL + +SG ++ + L+ M+L + K TL+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 318 N-------------IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
N +E+M G D+ Y +I GLC + A ++E +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 365 PSRLVYSKLINKLLDSNNAERAYKLF 390
P+ +S LI NA+R ++L+
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELY 436
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 166/416 (39%), Gaps = 54/416 (12%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG---VEA---DLLM 55
+ FFNWA + ++ +++ L + + F +LRD+ VNG + A D L+
Sbjct: 99 LEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALL 158
Query: 56 LSI--------VVDSFVRA-GHVSK---AIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
S V DS + H+ K A F + + G E+ N + L +
Sbjct: 159 YSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR 218
Query: 104 VGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVMKEME------------- 149
V A + M+ K++ N T N V G+ + G+ ++ ++++ME
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278
Query: 150 ----------------------ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
G+ P+ TF + G RA ++ EA +VF MK N
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
P+T YN +I + D + ++Y +M+ N + ++ TY +I L ++ K A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
Q E+ + ++P + T + I C +YK RSGC + + + +L+
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ + EM D + +GL + G+ + +++E K F
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 84/205 (40%)
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD 245
R C V++++ F + F + +M P +++ +++LL + +V
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 246 ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLM 305
AL+ + EM R + P T+ + C G + + + R G + +Y L+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 306 RLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
+ G + L + M + G +V + +I G C +L+ A V E P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 366 SRLVYSKLINKLLDSNNAERAYKLF 390
+ + Y+ LIN + E A++ +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFY 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 96/266 (36%), Gaps = 35/266 (13%)
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
F + + A + F MK+ P NA + + + D +++Y EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
PN T +++ R K+ +++ +M R G + I C G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 280 AALVIYKKARRSGCTISMEAYKILL------MRLSKLGKC----------------GTLL 317
+AL + +SG ++ + L+ M+L + K TL+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 318 N-------------IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
N +E+M G D+ Y +I GLC + A ++E +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 365 PSRLVYSKLINKLLDSNNAERAYKLF 390
P+ +S LI NA+R ++L+
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELY 436
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 4/323 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI-QVFGN 78
++ ++ A GR + V M+ G+ +L+ + V+D+ + G K + + F
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 79 LNELGMNRDTEALNVLLKCLCERSHV-GAASSVFNSMKGK-VAFNVATYNAVAGGWSKFG 136
+ G+ D N LL +C R + AA ++F+ M + + +V +YN + K G
Sbjct: 330 MQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+ + ++ +M + P+ ++ ++G +AGR DEA +F M+ D YN
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ + V +E + EM S + ++ TY ++ ++ K + ++F EM R
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
VLP T + I G A+ I+++ + +G + Y L+ L K G G+
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 317 LNIWEEMQEGGYSSDVEVYEYII 339
+++ +EM + G S +V Y II
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSII 591
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 7/292 (2%)
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
+GK+A +A+ ++G+ +R+ + A G F + GR+G +
Sbjct: 232 QGKLA------SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE 285
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVN-DFDECMKYYNEMLSNDCEPNLDTYTRI 233
EA VF SMKE +P+ YNA+I +F + K+++EM N +P+ T+ +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ R A +FDEM + + + +C G A I +
Sbjct: 346 LAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
++ +Y ++ +K G+ LN++ EM+ G + D Y ++S +G+ E A+
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
++ E G + Y+ L+ + K+F ++K L N Y
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY 517
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 1/201 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ SY ++ + F + + +MR G+ D + + ++ + + G +A+ +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ +G+ +D N LL ++ VF MK + V N+ TY+ + G+SK
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G + E + +E ++ G+ D + ++ L + G + A + M + P+ Y
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 196 NAMIFNFISVNDFDECMKYYN 216
N++I F D Y N
Sbjct: 588 NSIIDAFGRSATMDRSADYSN 608
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 104/243 (42%), Gaps = 17/243 (6%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ +D+ +Y ++ G++ + + V +M+ V +LL S ++D + + G +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGG 131
+++F G+ D + L+ LC+ VG+A S+ + M K ++ NV TYN++
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM-KERNCQP 190
FGR ++R + + E G + ++F + E N +
Sbjct: 594 ---FGRSATMDRSADYSNGGSLPFSSSALSALTETEG-----NRVIQLFGQLTTESNNRT 645
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
M + ++ + +M + +PN+ T++ I+ A R DA +
Sbjct: 646 TKDCEEGM-------QELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL 698
Query: 251 DEM 253
+E+
Sbjct: 699 EEL 701
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK 117
++V + + A S+ + + G+ + N ++ CLC+ + A+ M+ +
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 118 -VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
++ N+ T+N G+S G ++ V++++ G PD TF + + L RA + +A
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
F+ F M E +P+ YN +I + S D D +K + +M N P+L Y I +
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ RKV A ++ MLR G+ P T + IK L G A ++ R GC
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 166/409 (40%), Gaps = 36/409 (8%)
Query: 23 VIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL 82
V++ + GR + V + G++ + + V+D+ V++ + A F +
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEI 141
G D N+L+ +C++ V A + M+ + NV TY + G+ GR +E
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 142 ERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ------------ 189
+ ++ M + P+ T F+ G+ R +AFEV E++
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 190 -----------------------PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
PD++ +NA + + +D E + ++ +S +P
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG 389
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ Y ++ ALL ++ + + +M G+L + I LC A +
Sbjct: 390 FNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLT 449
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ + G + ++ + L S G + + E++ G+ DV + II+ LC
Sbjct: 450 EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK 509
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
++++A +E L G P+ + Y+ LI + + +R+ KLF K+K
Sbjct: 510 EIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 150/376 (39%), Gaps = 46/376 (12%)
Query: 24 IVKALGRRKFFSFMMGVL-RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL 82
I + L K F ++G + +D + V D ++ + +S + + Q + E
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK-----ETGQFLRKIGER 349
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFN---SMKGKVAFNVATYNAVAGGWSKFGRFN 139
G D+ N + CL + + +F+ S K FN Y + RF+
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN--GYLVLVQALLNAQRFS 407
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
E +R +K+M DG+ ++ ++ L +A R++ A M++R P+ +N +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
+ D + ++L + +P++ T++ II L R +++ DA F EML G+
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
P T I+ CS G ++ ++ K
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAK-------------------------------- 555
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
M+E G S D+ Y I C + +++ A +++ L G P YS LI L +
Sbjct: 556 ---MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 380 SNNAERAYKLFLKIKH 395
S A ++F I+
Sbjct: 613 SGRESEAREMFSSIER 628
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 34/252 (13%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L + SY ++ L + + L +M+ G+ +L+ + + + G V K
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
V L G D ++++ CLC + A F
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCF--------------------- 518
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
KEM G+ P+ T+ + + G D + ++F MKE PD
Sbjct: 519 -------------KEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDL 565
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
YNA I +F + + + ML +P+ TY+ +I AL + +A +MF
Sbjct: 566 YAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSS 625
Query: 253 MLRHGVLPPTGT 264
+ RHG +P + T
Sbjct: 626 IERHGCVPDSYT 637
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%)
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
++KE+ G V + GR G +VF + +P T +YNA+I +
Sbjct: 132 LLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALV 191
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
N D + +M S+ C+P+ TY +I + ++ V +A+++ +M + G P
Sbjct: 192 KSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVF 251
Query: 264 TITCFI 269
T T I
Sbjct: 252 TYTILI 257
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 129/328 (39%), Gaps = 12/328 (3%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL M NG+E D + I V S G V +A + L E DT N LLK LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 100 ERSHVGAASSVFNSMKGK--VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
+ + + M+ V ++ ++ + E ++ ++ G PDC
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ ++G + EA V+ MKE +PD YN +IF +E Y
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
M+ EP+ TYT ++ + R+ + + AL + +EM G P T + LC
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
+ +Y+ + SG + Y L+ L K GK +++ + SD Y
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY-- 443
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCP 365
LE + +++A +G P
Sbjct: 444 --------STLETTLKWLKKAKEQGLVP 463
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+ + RV+ M +G+ PD T + + L GR+DEA ++ + E++ PDT YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 198 MIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ + D ++ +EM + D +P+L ++T +I + + + +A+ + ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P +K C+ A+ +YKK + G Y L+ LSK G+
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
+ M + GY D Y +++G+C G+ A+ ++EE +G P+ Y+ L++
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 377 LLDSNNAERAYKLFLKIKHA 396
L + ++ +L+ +K +
Sbjct: 380 LCKARLMDKGMELYEMMKSS 399
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y I+K S +GV + M+ GVE D + + ++ +AG V +A +
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFN 139
+ G DT L+ +C + A S+ M+ + A N TYN + G K +
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ + + M++ GV + + + L ++G++ EA+EVF + D + Y+ +
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 154/383 (40%), Gaps = 11/383 (2%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
++ ++ L + + G++R+MR G + + + ++ +V KA+ +F +
Sbjct: 158 THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASS-----VFNSMKGKVAFNVATYNAVAGGWSK 134
N+ G+ + N+++ LC++ +G + + +S + ++ + K
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G + V KEM V D + V + GL +G M A+ C M +R PD
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
YN +I FDE + M + P+ +Y II L V A + ML
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+ +LP I YG +AL + G ++ L+ K G+
Sbjct: 398 KSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGR-- 455
Query: 315 TLLNIW---EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
L++ W EM+ D Y ++ C +G L A + +E L +G P + Y+
Sbjct: 456 -LIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 372 KLINKLLDSNNAERAYKLFLKIK 394
+L+ L ++A L +I+
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQ 537
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 156/334 (46%), Gaps = 8/334 (2%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFF-----SFMMGVLRDMRVNGVEADLLMLSI 58
FN K+ P + + +IV AL ++ + +L + N D+++ +I
Sbjct: 213 LFNTMNKYGIRPNRV-TCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA-PLDIVICTI 270
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
++DS + G+V +A++V+ +++ + D+ NV+++ LC ++ AA M K
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
V +V TYN + K G+F+E + M+ GVAPD ++ V ++GL G ++ A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
E SM + + P+ ++N +I + D + N MLS +PN+ T +I
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++ +++DA + +EM + P T T + C+ G A +Y + R GC +
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
Y L+ L G+ ++ +Q G + D
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITID 544
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 5/263 (1%)
Query: 94 LLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
+++ LC + + AA + M V + T+N + G K G + + +++EM G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+P+C ++ ++GL +D+A +F +M + +P+ N ++
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALL----RRRKVVDALQMFDEMLRHGVLPPTGTITCF 268
K E + + + N I T L+ + VV AL+++ EM + V +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
I+ LCS G AA + G + Y L+ L K GK ++ MQ GG
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 329 SSDVEVYEYIISGLCNIGQLENA 351
+ D Y+ II GLC G + A
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRA 389
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 167/397 (42%), Gaps = 24/397 (6%)
Query: 2 VTFFNWAVK-HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
+ FF W P +Y I + + R + +L M+ +GV D M I++
Sbjct: 75 LDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILL 134
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF--------- 111
DS +R+G A+ V + ELG + + +L L ++ + A S+
Sbjct: 135 DSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDN 194
Query: 112 --NSMKGKVAF-----NVATYNAVAGGWSKFGRFNEIERVMKEMEA-DGVAPDCTTFGVF 163
+ G+V N + G + +E +RV ++++ D ++ +
Sbjct: 195 HSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNIC 254
Query: 164 LEGLGRAGRMDEAFEVFCSMKERNC------QPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ G G G +D A +F MKER+ PD YN++I + + ++E
Sbjct: 255 IHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDE 314
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
+ + EP+ TY +I + ++ DA++++ EM +G +P T C +
Sbjct: 315 LKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARK 374
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A +++K + G S Y IL+ L + G+ ++ ++++ G D +
Sbjct: 375 VTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSI 434
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
+ LC G+LE AV ++EE +GF + S L+
Sbjct: 435 VGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 37 MMGVLRDMRVNGVEA--DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTE-ALNV 93
+ G+ R RV D+ M++ + ++ G +S A ++F N +G+ T N
Sbjct: 576 LFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNS 635
Query: 94 LLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
++ ++ + A V + M + A ++ATYN + G K GR + V+ + G
Sbjct: 636 MMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQG 695
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
D + + LG+A R+DEA ++F MK PD YN MI E
Sbjct: 696 GYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAY 755
Query: 213 KYYNEMLSNDCEPNLDTYT 231
KY ML C PN T T
Sbjct: 756 KYLKAMLDAGCLPNHVTDT 774
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 166/405 (40%), Gaps = 27/405 (6%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +YR++++ + M + +M+ NG D ++ + ++D ++A V++A Q+F
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKF 135
+ + G+ N+L+ L A ++F +K K F + T++ V +
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCRE 442
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ ++++EME G + D T L G + GR D ++ ++E N P+ +
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Query: 196 NAMIFN---------------FISVNDFDECMKYY----NEMLSNDCEPNLD---TYTRI 233
NA + F S F + M + + + P D + +
Sbjct: 503 NAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPY 562
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPT---GTITCFIKHLCSYGPPFAALVIYKKARR 290
+ L +R L R P + + F+ S G A +++
Sbjct: 563 MDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNG 622
Query: 291 SGCT-ISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
G T ++ Y ++ K G T + ++M E ++D+ Y II GL +G+ +
Sbjct: 623 MGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRAD 682
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
A V++ +G ++Y+ LIN L + + A +LF +K
Sbjct: 683 LASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMK 727
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 87 DTEALNVLLKCLCERSHVGAASS---VFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIER 143
D + +N L + + A +FN M G TYN++ + K G F
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGM-GVTDLTSYTYNSMMSSFVKKGYFQTARG 651
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
V+ +M + A D T+ V ++GLG+ GR D A V + ++ D +YN +I
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
DE + ++ M SN P++ +Y +I + K+ +A + ML G LP
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 135/347 (38%), Gaps = 57/347 (16%)
Query: 113 SMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGR 172
S++ + Y+ + + G E+ ++ M+ DGV D T + L+ L R+G+
Sbjct: 83 SLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGK 142
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML-SNDCEPNLDTYT 231
+ A V M+E + +VY++++ + ++ + ++L ++D + DT
Sbjct: 143 FESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGR 202
Query: 232 RIITALL-------------RR-------RKVVD-------------------------- 245
II + L RR ++V +
Sbjct: 203 VIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWG 262
Query: 246 ----ALQMFDEMLRHGVL------PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTI 295
AL +F EM + P T I LC +G AL+++ + + SG
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 296 SMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
Y+IL+ K + + I+ EMQ G+ D VY ++ G ++ A +
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 356 EEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
E+ + +G S Y+ LI+ L + AE + LF +K +A
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 2/151 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ + ++ +F GVL M N AD+ ++++ + G A V L
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRF 138
+ G D N L+ L + + + A+ +F+ MK + +V +YN + SK G+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
E + +K M G P+ T L+ LG+
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 1/207 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V +++V+G E D I++ ++ + A++++G + G DT N LL
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 100 ERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ V A +F M + V + TYN + G + GR + +++ G D
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
TF + L R G+++ A ++ M+ R D ++++ F +D K +
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVD 245
+ PN+ + + A L+R + D
Sbjct: 491 REGNLVPNVLRWNAGVEASLKRPQSKD 517
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 2/279 (0%)
Query: 99 CERSHVGAASSVFNSMKGKV--AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
C + A F++MK + NV YN V G+ K G ++ R + M + PD
Sbjct: 168 CRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPD 227
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TF + + G R+ + D A ++F MKE+ C+P+ +N +I F+S +E +K
Sbjct: 228 VCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAY 287
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
EM+ C + T ++ L R +V DA + ++L VLP ++ LC
Sbjct: 288 EMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGEN 347
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
A+ + ++ + G T A L+ L K G+ E+M G D +
Sbjct: 348 KAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFN 407
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
++ LC+ +A + A KG+ P Y L++
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVS 446
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 148/366 (40%), Gaps = 39/366 (10%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMR--VNGVEADLLMLSIVVDSFVRAGHVSKA 72
PE +R + A R + + + M+ ++G + ++ + + VV+ +V++G + KA
Sbjct: 154 PELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKA 212
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGG 131
++ + + + D N+L+ C S A +F MK K NV ++N + G
Sbjct: 213 LRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ G+ E ++ EM G T + ++GL R GR+D+A + + + P
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
Y +++ N M+ E+ P T ++ L + + A +
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+M+ G+LP + T ++ LCS S +A ++ L+ SK
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCS------------------SDHSTDANRLRLLASSK-- 432
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
GY D Y ++SG G+ + +++ E L K P Y+
Sbjct: 433 ---------------GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYN 477
Query: 372 KLINKL 377
+L++ L
Sbjct: 478 RLMDGL 483
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 24/286 (8%)
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVF------------LEGLGRAGRMDEAFEVFCSMK 184
RF+++ R++ + A+ P + G+F ++ RA +MD A F +MK
Sbjct: 128 RFDDLYRLLSFVAAN---PCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMK 184
Query: 185 ER-NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ +P+ VYN ++ ++ D D+ +++Y M +P++ T+ +I R K
Sbjct: 185 RLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKF 244
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
AL +F EM G P + I+ S G + + + GC S +IL
Sbjct: 245 DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEIL 304
Query: 304 LMRLSKLGK----CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
+ L + G+ CG +L++ + + S+ + Y ++ LC + A+ +MEE
Sbjct: 305 VDGLCREGRVDDACGLVLDL---LNKRVLPSEFD-YGSLVEKLCGENKAVRAMEMMEELW 360
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG P + + L+ L S E+A K+ +A L ++ +
Sbjct: 361 KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTF 406
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 39/271 (14%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F+ K A P D+ ++ +++ R F + + R+M+ G E +++ + ++ F
Sbjct: 215 FYQRMGKERAKP-DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGF 273
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSV------------- 110
+ +G + + +++ + ELG +L+ LC V A +
Sbjct: 274 LSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSE 333
Query: 111 --FNSM----------------------KGKVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
+ S+ KG+ +A V G K GR + M+
Sbjct: 334 FDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVE-GLRKSGRTEKASGFME 392
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
+M G+ PD TF + L L + +A + + +PD Y+ ++ F
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
E NEML D P++ TY R++ L
Sbjct: 453 RRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 155/368 (42%), Gaps = 5/368 (1%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++ AL D +Y ++ + G+ F + L+ M + V DL++ S +++ R
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNA 127
SKAI +F L G+ D A N ++ + A + M + V N +Y+
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ + + +F E V EM+ A D TT + ++ G+ + EA +F S+++ +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
+P+ YN ++ + F E + + M D E N+ TY +I + + A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
+ EM G+ P T + I G A +++K R SG I Y+ +++
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
++G G + E++ D E I+ L G+ E A V +A G
Sbjct: 481 ERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 368 LVYSKLIN 375
V+ +IN
Sbjct: 537 SVFGCMIN 544
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/317 (18%), Positives = 119/317 (37%), Gaps = 35/317 (11%)
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
+ K +V YN V + +F+ + EM +APD T+ + G+ G D
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
A M++ D +Y+ +I + D+ + + ++ + + P+L Y +I
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 235 TALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT 294
+ + +A + EM GVLP T + + + AL ++ + + C
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 295 ISMEAYKILLMRLSKLGKC----------------------GTLLNIWEE---------- 322
+ + I++ +L T+L ++ E
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 323 ---MQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
MQ +V Y +I + E A +++E +G P+ + YS +I+
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 380 SNNAERAYKLFLKIKHA 396
+ +RA LF K++ +
Sbjct: 448 AGKLDRAATLFQKLRSS 464
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y I+ G+ + + +R +GVE D ++ ++ ++ R G + A ++ L
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL---L 493
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGR 137
+EL + D + L + A+ VF G+V +++ + + +S+ R
Sbjct: 494 HELKLP-DNIPRETAITILAKAGRTEEATWVFRQAFESGEVK-DISVFGCMINLYSRNQR 551
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+ + V ++M G PD + L G+ ++A V+ M+E C V+
Sbjct: 552 YVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ 611
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR-RKVVDALQMFDEMLRH 256
M+ + S DF E ++ + L +D N ++ AL R K+ DA ++ + M
Sbjct: 612 MLSLYSSKKDF-EMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRER 670
Query: 257 GVLPP 261
G+L P
Sbjct: 671 GILKP 675
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 5/243 (2%)
Query: 35 SFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVL 94
SF G +DMR+ + + +I++ F+ A +VF + E+ + N L
Sbjct: 172 SFFDGA-KDMRL---RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227
Query: 95 LKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
+ LC +G A S+ M K ++ N T+ + G G +NE +++M +ME G
Sbjct: 228 IGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
P +G+ + LG+ GR+DEA + MK+R +PD +YN ++ + + E +
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 214 YYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
EM C+PN TY +I R L + + ML P T C + L
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 274 SYG 276
G
Sbjct: 408 KGG 410
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 146/341 (42%), Gaps = 1/341 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D SY ++ L + + F + +LR +R V + ++ + +AG V KAI VF
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKF 135
+ R ++LN L+ L + + A S F+ K ++ N ++N + G+
Sbjct: 140 HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDK 199
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
+ +V EM V P T+ + L R M +A + M ++ +P+ +
Sbjct: 200 CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTF 259
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
++ +++E K +M C+P L Y +++ L +R ++ +A + EM +
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ P + HLC+ A + + + GC + Y++++ ++ +
Sbjct: 320 RRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDS 379
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVME 356
LN+ M + + +++GL G L++A V+E
Sbjct: 380 GLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 1/306 (0%)
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVA 129
+A+ +F E+G D + + L+ L + + A + ++ + V + + +
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
+ K G ++ V ++ + + + L G +++A F K+ +
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
P++ +N +I F+ D++ K ++EML + +P++ TY +I L R + A +
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
++M++ + P T +K LC G A + GC + Y IL+ L K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 310 LGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLV 369
G+ + EM++ DV +Y +++ LC ++ A V+ E KG P+
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 370 YSKLIN 375
Y +I+
Sbjct: 364 YRMMID 369
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 166/418 (39%), Gaps = 48/418 (11%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVN-GVEADLLMLSIVVDSF 63
F WA P +YR + L + F + +L +M + G+ D + ++ F
Sbjct: 63 FRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGF 122
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA 123
RA + + I V +++ G+ + N +L L + + A F
Sbjct: 123 GRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLV-KEDIDIAREFFT----------- 170
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
++M A G+ D T+G+ ++GL R+ + F++ M
Sbjct: 171 ----------------------RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIM 208
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
K P+ VYN ++ +EM EPN T+ +I+A +K+
Sbjct: 209 KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKL 264
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+ ++ + ++ G +P T+T ++ LC+ G AL + ++ G + + A L
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ LGK + EM+ GY +VE Y +I+G C++G L++A+ +
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENAR---------NYWRSNGWH 412
+ ++ LI L + K+ ++ + ++ AR +++ N W
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWE 442
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 149/363 (41%), Gaps = 6/363 (1%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P D+ ++ +++ A + M +L G D++ ++ V++ G VS+A++
Sbjct: 246 PNDV-TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWS 133
V + G D A N L+K C + A F M+ K NV TYN + G+
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
G + +M+ D + + TF + GL GR D+ ++ M++ +
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGAR 424
Query: 194 V--YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ YN +I+ F N +++ +++ +M P + + +L + + D +D
Sbjct: 425 IDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
+M+ G +P C I +G +L + G + +++ K
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYS 371
K + E+M E G D E Y ++ LC G ++ A L+ + K P ++S
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWS 602
Query: 372 KLI 374
L+
Sbjct: 603 SLM 605
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 169/440 (38%), Gaps = 39/440 (8%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF + + D+ +Y +++K L +L+ M+ +GV + ++ + ++ +
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHAL 227
Query: 64 VRAGHVSKAIQVFGNLNE-------------------------------LGMNRDTEALN 92
+ G V +A + + E LG D +
Sbjct: 228 CKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVT 287
Query: 93 VLLKCLCERSHVGAASSVFNSMKGKVA-FNVATYNAVAGGWSKFGRFNEIERVMKEMEAD 151
+++ LC V A V ++ K +V N + G+ G+ +R EME
Sbjct: 288 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
G P+ T+ + + G G +D A + F MK + + A +N +I D+
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Query: 212 MKYYNEMLSNDC--EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCF- 268
+K M +D +D Y +I + + DAL+ +L+ L P F
Sbjct: 408 LKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEF---LLKMEKLFPRAVDRSFK 464
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
+ LC G Y + G S+ L+ R S+ GK L + +M GY
Sbjct: 465 LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGY 524
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
+ +I G C ++ N + +E+ +G P Y+ L+ +L + ++A+
Sbjct: 525 LPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWL 584
Query: 389 LFLKIKHARSLENARNYWRS 408
LF ++ +S+ + W S
Sbjct: 585 LFSRMVE-KSIVPDPSMWSS 603
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 109/208 (52%), Gaps = 1/208 (0%)
Query: 56 LSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM- 114
+ +++ V A + ++F + +LG+ D LN+L+K LCE ++ AA + +
Sbjct: 170 FNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFP 229
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
+ K NV T++ + G+ G+F E ++++ ME + + PD TF + + GL + GR++
Sbjct: 230 QQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVE 289
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
E ++ MK + C+P+ Y +++ + E + ++M+S P+ +Y +++
Sbjct: 290 EGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMV 349
Query: 235 TALLRRRKVVDALQMFDEMLRHGVLPPT 262
L + VV+ + +M+ HG +P T
Sbjct: 350 LGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 1/209 (0%)
Query: 66 AGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVAT 124
AG +++AI++ + + G +++ N +L L +F S K V +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
N + G + G +++ E P+ TF + G G+ +EAF++ M+
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
+ +PDT +N +I +E + M CEPN TY ++ LL +++ +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLC 273
+A +M +M+ G+ P + + LC
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 101/254 (39%)
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GR N ++ M G P +F L L A DE ++F S + + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N +I + + ++ +E PN+ T++ +I + K +A ++ + M +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ P T T I L G + + ++ + GC + Y+ +L L +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ +M G Y+ ++ GLC + V+ + ++ GF P L++ K++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 376 KLLDSNNAERAYKL 389
++ NN + L
Sbjct: 386 CVVSKNNDDSQANL 399
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 6/343 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y +++A + + + +L ++ V G E +L+ ++++ F + G A+ +F L
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRF 138
G + + N+LL+CLC A+S+ M G A +V TYN + + GR
Sbjct: 273 PAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRT 332
Query: 139 NEIERVMKEMEADG--VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+ +V+KEM T++ + L + G++D + M R C+P+ YN
Sbjct: 333 EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCE-PNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
A I + N + Y + LSN + D Y +IT+L R+ A Q+ EM R
Sbjct: 393 A-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS-GCTISMEAYKILLMRLSKLGKCG 314
G P T + I+ LC G A+ + S C +++ + +++ L K+ +
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTD 511
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+ ++E M E + Y ++ G+ + +LE A V++E
Sbjct: 512 LAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDE 554
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 148/352 (42%), Gaps = 19/352 (5%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVA 123
+A + KAI+V + G+ D A L+ LC+R +VG A + M+ N
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TYNA+ G G N+ + ++ + G+AP+ T+ LE + DEA ++ +
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ +P+ YN ++ F D+ M + E+ + + N+ +Y ++ L +
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCT--ISMEAYK 301
+A + EM P T I L +G AL + K+ + ++ +Y
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 302 ILLMRLSKLGKCGTLLNIWEEM-------QEGGYSSDVEVYEYIISGLC-NIGQLENAVL 353
++ RL K GK ++ +EM EG Y++ I LC + +++ A
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA--------IGSLCEHNSKVQEAFY 409
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+++ +K C + Y +I L N A++L ++ +A Y
Sbjct: 410 IIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTY 461
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 127/288 (44%), Gaps = 4/288 (1%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NVA + K R + RV++ M + G+ PD + + + L + G + A ++
Sbjct: 105 NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV 164
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M++ +T YNA++ + ++ +++ ++ PN TY+ ++ A +
Sbjct: 165 EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE 224
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
R +A+++ DE++ G P + + C G A+ ++++ G ++ +Y
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
ILL L G+ ++ EM G + V Y +I+ L G+ E A+ V++E +
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MS 343
Query: 361 KG---FCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
KG F + Y+ +I +L + K ++ + R N Y
Sbjct: 344 KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 134/341 (39%), Gaps = 3/341 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V+ M +G+ D + +V+ + G+V A+Q+ + + G +T N L++ LC
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 100 ERSHVGAASS-VFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + V M+ +A N TY+ + K +E +++ E+ G P+
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
++ V L G + GR D+A +F + + + + YN ++ ++E EM
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR--HGVLPPTGTITCFIKHLCSYG 276
D P++ TY +I +L + ALQ+ EM + H + I LC G
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEG 367
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
+ + C + Y + K I + + + Y+
Sbjct: 368 KVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYK 427
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+I+ LC G A ++ E GF P YS LI L
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 96/221 (43%)
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+ ++F S+ +P+ A ++++ N + ++ M+S+ P+ YT
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
++ L +R V A+Q+ ++M HG T T ++ LC G +L ++ + G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
+ Y LL K + + +E+ G ++ Y +++G C G+ ++A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+ E KGF + + Y+ L+ L E A L ++
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 75/187 (40%), Gaps = 35/187 (18%)
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
+ + + +++ +PN+ T+++ L + ++ A+++ + M+ G++P T
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 267 CFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEG 326
+ LC K G G + + E+M++
Sbjct: 146 YLVNQLC-----------------------------------KRGNVGYAMQLVEKMEDH 170
Query: 327 GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
GY S+ Y ++ GLC +G L ++ +E + KG P+ YS L+ + A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 387 YKLFLKI 393
KL +I
Sbjct: 231 VKLLDEI 237
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 100/246 (40%)
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
++ + G P+ L L +A R+ +A V M PD + Y ++
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 205 VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
+ M+ +M + N TY ++ L + +LQ + +++ G+ P T
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 265 ITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
+ ++ A+ + + G ++ +Y +LL K G+ + ++ E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
G+ ++V Y ++ LC G+ E A ++ E PS + Y+ LIN L E
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 385 RAYKLF 390
+A ++
Sbjct: 334 QALQVL 339
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 98 LCER-SHVGAASSVFNSMKGKVAFNVAT-YNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
LCE S V A + S+ K Y +V + G +++ EM G P
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP 456
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKE-RNCQPDTAVYNAMIFNFISVNDFDECMKY 214
D T+ + GL G A EV M+E NC+P +NAMI + D M+
Sbjct: 457 DAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEV 516
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+ M+ PN TY ++ + ++ A ++ DE+
Sbjct: 517 FEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 8/369 (2%)
Query: 21 YRVIVKALGRRKFFSFMMGVL----RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
Y +I+ LG K F + VL D R+ E ++ V++ F R S+A+ +F
Sbjct: 50 YDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTE---IIFCNVINFFGRGKLPSRALHMF 106
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
+ + R ++LN LL L + + +S+ + TYN + G S+ G
Sbjct: 107 DEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSG 166
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM-KERNCQPDTAVY 195
F++ ++ EM V P TFG + GL + R+ EA ++ M K +P +Y
Sbjct: 167 CFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIY 226
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
++I + + K +E + + Y+ +I++L++ + + + +EM
Sbjct: 227 ASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSE 286
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
G P T T I C +A + + G + +Y ++L ++ K
Sbjct: 287 KGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE 346
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
++E+M G S D Y + GLC Q E A ++++E L KG+ P R +
Sbjct: 347 ATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQ 406
Query: 376 KLLDSNNAE 384
KL +S E
Sbjct: 407 KLCESGKLE 415
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 120/307 (39%), Gaps = 36/307 (11%)
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADG-VAPDCTTFGVFLEGLGRAGRMDEAFE 178
+++ Y+ + F+E+++V+ ++ D + P F + GR A
Sbjct: 45 YSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALH 104
Query: 179 VFCSMKERNCQ----------------------------------PDTAVYNAMIFNFIS 204
+F M + CQ PD YN +I
Sbjct: 105 MFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQ 164
Query: 205 VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR-HGVLPPTG 263
FD+ +K ++EM+ +P T+ +I L + +V +AL+M +ML+ +GV P
Sbjct: 165 SGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVH 224
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
IK LC G A + +A + Y L+ L K G+ + I EEM
Sbjct: 225 IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 324 QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNA 383
E G D Y +I+G C E+A V++E + KG P + Y+ ++
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 384 ERAYKLF 390
E A LF
Sbjct: 345 EEATYLF 351
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y +++ + F + + +M V+ + ++ + V +A+++
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 77 GNLNEL-GMNRDTEALNVLLKCLCERSHVGAASSVFN----SMKGKVAFNVATYNAVAGG 131
++ ++ G+ L+K LC+ +G S F + +GK+ + A Y+ +
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQ---IGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
K GR NE+ +++EM G PD T+ V + G + A V M E+ +PD
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
YN ++ F + ++E + +M C P+ +Y + L + +A + D
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYG 276
EML G P + F++ LC G
Sbjct: 388 EMLFKGYKPRRDRLEGFLQKLCESG 412
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 149/378 (39%), Gaps = 38/378 (10%)
Query: 2 VTFFNWAV---KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSI 58
V F W V AL D + V+ LGR +S +L + + D+ +
Sbjct: 156 VFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTT 215
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
++ ++ R G KAI +F + E+G +
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSP-------------------------------- 243
Query: 119 AFNVATYNAVAGGWSKFGR-FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ TYN + + K GR + +I V+ EM + G+ D T L R G + EA
Sbjct: 244 --TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
E F +K +P T YNA++ F + E + EM N C + TY ++ A
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
+R +A + + M + GV+P T T I G AL ++ + +GC +
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
Y +L L K + ++ + +M+ G S + + +++ N G + V E
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Query: 358 ALHKGFCPSRLVYSKLIN 375
GF P R ++ LI+
Sbjct: 482 MKSCGFEPDRDTFNTLIS 499
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 156/400 (39%), Gaps = 42/400 (10%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P D +Y +V A R F GV+ M GV + + + V+D++ +AG +A++
Sbjct: 348 PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK 407
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWS 133
+F ++ E G +T N +L L ++S + MK + N AT+N +
Sbjct: 408 LFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
G + RV +EM++ G PD TF + GR G +A +++ M
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
YNA++ D+ ++M S +P +Y+ ++ + + ++ +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL-GIERIENR 586
Query: 254 LRHGVLPPTGTI---------------------TCFIKHLCSYGPPFA------------ 280
++ G + P+ + T F KH Y P
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH--GYKPDMVIFNSMLSIFTRN 644
Query: 281 -----ALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVY 335
A I + R G + + Y L+ + G+C I + +++ D+ Y
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 336 EYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+I G C G ++ AV ++ E +G P Y+ ++
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 143/357 (40%), Gaps = 1/357 (0%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y +++ G+ ++ + VL++M N AD + + +V ++VRAG +A V +
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRF 138
+ G+ + ++ + A +F SMK N TYNAV K R
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
NE+ +++ +M+++G +P+ T+ L G G VF MK +PD +N +
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + + K Y EM + TY ++ AL R+ + +M G
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P + + ++ G I + + S + LL+ K
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+ ++ GY D+ ++ ++S + A ++E G P + Y+ L++
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/335 (18%), Positives = 134/335 (40%), Gaps = 1/335 (0%)
Query: 19 GSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGN 78
++ ++ G + F+ V R+M+ G E D + ++ ++ R G A +++G
Sbjct: 457 ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGR 137
+ G N N LL L + + +V + MK K +Y+ + ++K G
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+ IER+ ++ + P L + + + F K+ +PD ++N+
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
M+ F N +D+ + + P+L TY ++ +RR + A ++ + +
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
+ P + IK C G A+ + + G + Y + + +G +
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE 756
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
++ E M + + ++ ++ G C G+ A+
Sbjct: 757 DVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 105/272 (38%), Gaps = 36/272 (13%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH--------- 68
+ +Y ++ AL R+ + V+ DM+ G + S+++ + + G+
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEN 585
Query: 69 --------------------------VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERS 102
++ + + F + G D N +L +
Sbjct: 586 RIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 103 HVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
A + S++ ++ ++ TYN++ + + G + E ++K +E + PD ++
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
++G R G M EA + M ER +P YN + + ++ F E M N
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
DC PN T+ ++ R K +A+ ++
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 8/312 (2%)
Query: 3 TFFNWAV-----KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLS 57
++ +W + H P +I +Y +V A R + ++ +G+E D+ + +
Sbjct: 302 SYMSWKLYCEMRSHQCKP-NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 360
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG- 116
+++S+ RAG+ A ++F + +G D + N+++ A +VF MK
Sbjct: 361 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 420
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
+A + ++ + +SK + E ++KEM +GV PD L GR G+ +
Sbjct: 421 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 480
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
++ M+ C D + YN +I + + + + E+ + P++ T+T I A
Sbjct: 481 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 540
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
R++ V L++F+EM+ G P GT + CS + + G T+S
Sbjct: 541 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSEEQVEQVTSVLRTMHKGVTVS 599
Query: 297 MEAYKILLMRLS 308
K++ L+
Sbjct: 600 SLVPKLMAKSLT 611
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 1/302 (0%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVA 123
R G+ +AI VF + TE N+++ + S + ++ M+ + N+
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 322
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY A+ +++ G + E + ++++ DG+ PD + +E RAG A E+F M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ C+PD A YN M+ + + + EM P + ++ +++A + R V
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+ EM +GV P T + + G I + CT + Y IL
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K G + ++ E++E + DV + I + V EE + G
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Query: 364 CP 365
P
Sbjct: 563 AP 564
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 167/393 (42%), Gaps = 11/393 (2%)
Query: 13 ALPEDIGSY----RVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
ALP S+ V V+ +K+ S ++ +R + + D++ ++++D++ +
Sbjct: 133 ALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQ 192
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK----GKVAFNVAT 124
+A ++ L E + +L+K C + A V M+ V
Sbjct: 193 YKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTV 252
Query: 125 YNA-VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
YNA + G + G E V + M+ D P T+ + + G+A + +++++C M
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ C+P+ Y A++ F ++ + + ++ + EP++ Y ++ + R
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A ++F M G P + + G A ++++ +R G +M+++ +L
Sbjct: 373 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 432
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
L SK I +EM E G D V +++ +GQ ++ E + G
Sbjct: 433 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE-MENGP 491
Query: 364 CPSRL-VYSKLINKLLDSNNAERAYKLFLKIKH 395
C + + Y+ LIN + ER +LF+++K
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVELKE 524
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 144/340 (42%), Gaps = 23/340 (6%)
Query: 58 IVVDSFVRAGHVSKAIQV----FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS 113
+ DS + G++ KA +V N +E+G R EA+ +++ + + G S
Sbjct: 132 VTADSLLANGNLQKAHEVMRCMLRNFSEIG--RLNEAVGMVM----DMQNQGLTPSSI-- 183
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
T N V + G E V EM GV PD +++ + + G R G++
Sbjct: 184 ----------TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI 233
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
EA M +R PD A ++ + + Y+ +M+ +PNL +T +
Sbjct: 234 QEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 293
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
I L ++ + A +M +EM+R+G P T T I LC G A ++ K RS
Sbjct: 294 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDT 353
Query: 294 -TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
++ Y ++ K K ++ M+E G +V Y +I+G C G A
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 353 LVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
+M +GF P+ Y+ I+ L + A AY+L K
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 151/369 (40%), Gaps = 4/369 (1%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V +M V GV D ++V R G + +A + + + G D ++L LC
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 100 ERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
E V A F M + F N+ + ++ G K G + +++EM +G P+
Sbjct: 264 ENGLVNRAIWYFRKMI-DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
T ++GL + G ++AF +F + + +P+ Y +MI + + + ++
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
M PN++TYT +I + A ++ + M G +P T I LC
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
A + KA G Y IL+ K L + M + G+ +D+ +
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+I+ C +++ + + + + G P++ Y+ +I+ + + A K F +K
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 397 RSLENARNY 405
+ ++ Y
Sbjct: 563 GCVPDSFTY 571
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 151/393 (38%), Gaps = 2/393 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D + +I+ AL + + R M G + +L+ + ++D + G + +A ++
Sbjct: 251 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 310
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSK 134
+ G + L+ LC+R A +F + + NV TY ++ GG+ K
Sbjct: 311 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
+ N E + M+ G+ P+ T+ + G +AG A+E+ M + P+
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
YNA I + + E + N+ S E + TYT +I ++ + AL F M
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN 490
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+ G I C + +++ G + E Y ++ K G
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDID 550
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
L + M+ G D Y +ISGLC ++ A + E + +G P + L
Sbjct: 551 LALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLA 610
Query: 375 NKLLDSNNAERAYKLFLKIKHARSLENARNYWR 407
+ N++ A L + + R R
Sbjct: 611 YEYCKRNDSANAMILLEPLDKKLWIRTVRTLVR 643
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 149/376 (39%), Gaps = 2/376 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D SY+++V R L M G D ++++ + G V++AI F
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
+ +LG + L+ LC++ + A + M + NV T+ A+ G K
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 136 GRFNEIERV-MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G + R+ +K + +D P+ T+ + G + +++ A +F MKE+ P+
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
Y +I F + N M PN+ TY I +L ++ + +A ++ ++
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
G+ T T I+ C AL + + ++G M IL+ + K
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 315 TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
+++ + G E Y +IS C G ++ A+ G P Y LI
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 375 NKLLDSNNAERAYKLF 390
+ L + + A KL+
Sbjct: 576 SGLCKKSMVDEACKLY 591
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/320 (17%), Positives = 125/320 (39%), Gaps = 6/320 (1%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K L ++ +Y ++ + F ++ M G ++ + +DS +
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYN 126
+A ++ G+ D +L++ C+++ + A + F M K F ++ N
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM-NKTGFEADMRLNN 502
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ + + + E ER+ + + + G+ P T+ + + G +D A + F +MK
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
C PD+ Y ++I + DE K Y M+ P T + +R +A
Sbjct: 563 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANA 622
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+ + + + + + T+ ++ LCS A + ++K +
Sbjct: 623 MILLEPLDKKLWIR---TVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTA 679
Query: 307 LSKLGKCGTLLNIWEEMQEG 326
S+ GK + ++ E + G
Sbjct: 680 CSESGKNNLVTDLTERISRG 699
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 8/312 (2%)
Query: 3 TFFNWAV-----KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLS 57
++ +W + H P +I +Y +V A R + ++ +G+E D+ + +
Sbjct: 280 SYMSWKLYCEMRSHQCKP-NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYN 338
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG- 116
+++S+ RAG+ A ++F + +G D + N+++ A +VF MK
Sbjct: 339 ALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL 398
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
+A + ++ + +SK + E ++KEM +GV PD L GR G+ +
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
++ M+ C D + YN +I + + + + E+ + P++ T+T I A
Sbjct: 459 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
R++ V L++F+EM+ G P GT + CS + + G T+S
Sbjct: 519 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSEEQVEQVTSVLRTMHKGVTVS 577
Query: 297 MEAYKILLMRLS 308
K++ L+
Sbjct: 578 SLVPKLMAKSLT 589
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 123/302 (40%), Gaps = 1/302 (0%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVA 123
R G+ +AI VF + TE N+++ + S + ++ M+ + N+
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY A+ +++ G + E + ++++ DG+ PD + +E RAG A E+F M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ C+PD A YN M+ + + + EM P + ++ +++A + R V
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+ EM +GV P T + + G I + CT + Y IL
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K G + ++ E++E + DV + I + V EE + G
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 364 CP 365
P
Sbjct: 541 AP 542
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 167/393 (42%), Gaps = 11/393 (2%)
Query: 13 ALPEDIGSY----RVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
ALP S+ V V+ +K+ S ++ +R + + D++ ++++D++ +
Sbjct: 111 ALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQ 170
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK----GKVAFNVAT 124
+A ++ L E + +L+K C + A V M+ V
Sbjct: 171 YKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTV 230
Query: 125 YNA-VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
YNA + G + G E V + M+ D P T+ + + G+A + +++++C M
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+ C+P+ Y A++ F ++ + + ++ + EP++ Y ++ + R
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A ++F M G P + + G A ++++ +R G +M+++ +L
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
L SK I +EM E G D V +++ +GQ ++ E + G
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE-MENGP 469
Query: 364 CPSRL-VYSKLINKLLDSNNAERAYKLFLKIKH 395
C + + Y+ LIN + ER +LF+++K
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKE 502
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 170/378 (44%), Gaps = 3/378 (0%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F KH LP ++ +Y ++ + G+ +++ V + ++++ +VD F
Sbjct: 257 FELMKKHGVLP-NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVA 123
+A + A +F ++ + G++ + N L+ C+ ++ A + + M+ ++ +V
Sbjct: 316 KARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY + G + E R+ ++M+ + + P T+ + G + M++A ++ M
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+P+ ++ +I + +V D M Y EM P++ TYT +I A + +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
+AL+++ +ML G+ P T C + G A+ Y++ + + + L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ L + G + +M+ G + D+ Y ++ G ++ + +++ + + G
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 364 CPSRLVYSKLINKLLDSN 381
P+ LV ++L+ + +N
Sbjct: 616 LPNLLV-NQLLARFYQAN 632
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 154/385 (40%), Gaps = 36/385 (9%)
Query: 7 WAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRA 66
W + D + I+ L RR+ F + + M G+ D+ + ++ +
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATY 125
G SK ++ + LG+ + + + LC + + A +F MK V N+ TY
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 126 NAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
+A+ G+ K G + + KE+ + P+ FG ++G +A + A +F M +
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD 245
P+ VYN +I + E + +EM S + P++ TYT +I L +V +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 246 ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLM 305
A ++F +M + P + T I C +ME
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCK-------------------EYNMEQ------ 427
Query: 306 RLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
L++ EM G ++ + +I G CN+ ++ A+ + E KG P
Sbjct: 428 ----------ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 366 SRLVYSKLINKLLDSNNAERAYKLF 390
+ Y+ LI+ N + A +L+
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLY 502
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 139/319 (43%), Gaps = 10/319 (3%)
Query: 94 LLKCLCERSHVGAASS-----VFNSMKG--KVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
L+K L ER + S +FN+++ F++ ++ + + + G F E V +
Sbjct: 97 LIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR 156
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
EM+ +PD L GL R R D + + M R PD +Y +
Sbjct: 157 EMKC---SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG 213
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
+ + K +EM S +PN+ YT I L R K+ +A +MF+ M +HGVLP T +
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 267 CFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEG 326
I C G A +YK+ + ++ + L+ K + T +++ M +
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 327 GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
G ++ VY +I G C G + AV ++ E P Y+ LIN L + A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 387 YKLFLKIKHARSLENARNY 405
+LF K+K+ R ++ Y
Sbjct: 394 NRLFQKMKNERIFPSSATY 412
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 150/340 (44%), Gaps = 4/340 (1%)
Query: 55 MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM 114
+ S+++ F+ G +A+ V E+ + D++A +L L R + + M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVS---REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 115 KGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+ + +V Y + K G +++ E+++ EM + G+ P+ + +++ L R +M
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
+EA ++F MK+ P+ Y+AMI + + + Y E+L + PN+ + +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ + R++V A +F M++ GV P C I C G A+ + +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
+ + Y IL+ L + ++++M+ Y +I G C +E A+
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
+ E G P+ + +S LI+ + + + A L+ ++
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 157/378 (41%), Gaps = 13/378 (3%)
Query: 17 DIGSYRVIVKALGRRKFFS---FMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
DI S+ + + K MGV+ + +++ S +D+F ++G + A+
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVM----LKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGW 132
+ F ++ ++ + L+ C+ + A S++ M+ +++ NV TY A+ G+
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K G E + M D V P+ + ++G + G D A + M + + D
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDI 303
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
Y +I E + +M +D P++ +T ++ A + ++ A+ M+ +
Sbjct: 304 TAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHK 363
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
++ G P ++ I + G A+V + + + Y +L+ L K G
Sbjct: 364 LIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM-----YTVLIDALCKEGD 418
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
+ ++ ++ E G D +Y I+GLC G L +A + + +G L Y+
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 373 LINKLLDSNNAERAYKLF 390
LI L A ++F
Sbjct: 479 LIYGLASKGLMVEARQVF 496
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 126/309 (40%), Gaps = 39/309 (12%)
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
+++N+V K G+ E ++ M G PD ++ ++G R G + A V S
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 183 MKERN---CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
++ + C+PD +N++ F + DE Y ML C PN+ TY+ I +
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCK 175
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++ AL+ F M R + P T TC I C G A+ +YK+ RR ++++
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEG--------------------------------- 326
Y L+ K G+ ++ M E
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 327 --GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAE 384
G D+ Y IISGLC G+L+ A ++E+ P ++++ ++N S +
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 385 RAYKLFLKI 393
A ++ K+
Sbjct: 356 AAVNMYHKL 364
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 151/379 (39%), Gaps = 49/379 (12%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
VV + G V A + ++ G D + N L+ C + +AS V S++
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 119 AF----NVATYNAVAGGWSK-------------------------------FGRFNEIER 143
F ++ ++N++ G+SK F + E++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 144 VMKE---MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
+K M+ D ++P+ TF ++G +AG ++ A ++ M+ + Y A+I
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
F + + Y+ M+ + EPN YT II +R +A++ +ML G+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
I LC G A I + +S M + ++ K G+ +N++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR---LVYSKLINKL 377
++ E G+ DV +I G+ GQL A++ FC + ++Y+ LI+ L
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY--------FCIEKANDVMYTVLIDAL 413
Query: 378 LDSNNAERAYKLFLKIKHA 396
+ +LF KI A
Sbjct: 414 CKEGDFIEVERLFSKISEA 432
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/357 (18%), Positives = 150/357 (42%), Gaps = 6/357 (1%)
Query: 8 AVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
++K AL ++ ++ ++ + + + ++MR + +++ + ++D F + G
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 68 HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYN 126
+ +A +++ + E + ++ ++ +R A M + + ++ Y
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ G G+ E ++++ME + PD F + ++GRM A ++ + ER
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
+PD + MI E + Y+ +ND YT +I AL + ++
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEV 422
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
++F ++ G++P T +I LC G A + + + G + + AY L+
Sbjct: 423 ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
L+ G +++EM G S D V++ +I G + A ++ + +G
Sbjct: 483 LASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
DI +Y VI+ L ++ DM + + D+++ + +++++ ++G + A+ ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
L E G D AL+ ++ + + + A F K N Y + K G
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA----NDVMYTVLIDALCKEG 417
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
F E+ER+ ++ G+ PD + ++ GL + G + +AF++ M + D Y
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
+I+ S E + ++EML++ P+ + +I A + + A + +M R
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Query: 257 GVLPPTGTITC 267
G++ C
Sbjct: 538 GLVTAVSDADC 548
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 170/430 (39%), Gaps = 44/430 (10%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FFNWA + P D SY I K+L + FS M + + ++ N + D + ++D+
Sbjct: 68 FFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTL 127
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
V A V G + N LL L A +F M+ K V+ N
Sbjct: 128 VLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNT 187
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVF-LEGLGRAGRMDEAFEVFC 181
+ G + + N++ R++ E++ + + + + L L + R +AF +
Sbjct: 188 LGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILE 247
Query: 182 SMKERNCQPD-----------------------------------TAVYNAMIFNFISVN 206
++ +C+PD ++ Y A I + IS
Sbjct: 248 ELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAK 307
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD---ALQMFDEMLRHGVLPPTG 263
E + ++S + D I+ AL+ VD A++ M+ G LP
Sbjct: 308 RLTEAKEVAEVIVSGKFPMDND----ILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIR 363
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
T++ K+LC + + Y+ G +++Y +++ L K G+ +EM
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEM 423
Query: 324 QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNA 383
++ G + DV +Y +I C + A + +E +G + Y+ LI KL + A
Sbjct: 424 KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEA 483
Query: 384 ERAYKLFLKI 393
E + +LF K+
Sbjct: 484 EESLRLFDKM 493
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 149/361 (41%), Gaps = 3/361 (0%)
Query: 34 FSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNV 93
+ + + MR GV + L + + F R+ ++ +++ + + +N + + +
Sbjct: 168 YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL 227
Query: 94 L-LKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD 151
L L LC+ S A + ++ + Y +A + G E + V+K+
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
GVAP + + F+ L A R+ EA EV + D + +A+I + +S D D
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGS-VSAVDPDSA 346
Query: 212 MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
+++ M+S P + T +++ L R K ++ ++ + G + + I
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISF 406
Query: 272 LCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD 331
LC G + ++ ++ G + Y L+ K +W+EM G +
Sbjct: 407 LCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
Query: 332 VEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFL 391
+ Y +I L G+ E ++ + ++ L +G P +Y LI L E A ++F
Sbjct: 467 LTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Query: 392 K 392
K
Sbjct: 527 K 527
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 90 ALNVLLKCLCERSHVGAASSVFNSMKGKVAFN-VATYNAVAGGWSKFGRFNEIERVMKEM 148
L+ L K LC + + K F+ + +Y+ + K GR E ++EM
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEM 423
Query: 149 EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDF 208
+ +G+APD + + +E +A + A +++ M C+ + YN +I +
Sbjct: 424 KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEA 483
Query: 209 DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE-MLRHGVLPPTGTITC 267
+E ++ +++ML EP+ Y +I L + K+ A+++F + M R ++
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSE 543
Query: 268 FIKHLCSYG 276
F+ +LCS G
Sbjct: 544 FVLNLCSNG 552
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%)
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
Y+ + +++ G + + R++ EM DG TF + + G AG + E F K
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
N +P YNA++ + + V + Y +ML + P++ TY ++ A R K
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILL 304
++ DEM++ G P T + HL + P AAL + R G + + L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
LS+ GK +E + G + DV Y +I+G + G+LE A + +E KG
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 365 PSRLVYSKLI 374
P+ Y+ +I
Sbjct: 395 PNVFTYNSMI 404
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 130/340 (38%), Gaps = 7/340 (2%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W Y +++K + M ++ +M +G ++++ +
Sbjct: 138 FFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC 197
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
AG ++ F + N +L L V+ M + +V
Sbjct: 198 GEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDV 257
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TYN V + G+ + + R++ EM DG +PD T+ + L L + A +
Sbjct: 258 LTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNH 317
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M+E +P + +I + C + +E + C P++ YT +IT + +
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ A +MF EM G LP T I+ C G A + K+ GC + Y
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
L+ L GK + ++M E G+ Y ++IS L
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVEKGH------YVHLISKL 471
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 12/288 (4%)
Query: 94 LLKCLCERSHVGAASSVFNSMKGKVAFNV----ATYNAVAGGWSKFGRFNEIERVMKEME 149
LL C C G A V FN +YNA+ ++ I+ V ++M
Sbjct: 192 LLICTC--GEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQML 249
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
DG PD T+ + + R G+ D + + M + PD YN ++ + + N
Sbjct: 250 EDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPL 309
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
+ N M EP + +T +I L R K+ DE ++ G P T I
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
S G A ++K+ G ++ Y ++ GK + +EM+ G +
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+ VY +++ L N G++ A V+++ + KG Y LI+KL
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH------YVHLISKL 471
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 11/363 (3%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF AV L ++ +Y +V AL + + ++R + G E D + S + +
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNV 122
+ G + A+ + E GMNRD + ++L+ L + +V A + M K V N+
Sbjct: 253 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY A+ G K G+ E + + + G+ D + ++G+ R G ++ AF +
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M++R QP YN +I E + +S ++ TY+ ++ + ++ +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQN 427
Query: 243 VVDALQMFDEMLRHGVLPPTGTITC--FIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+ L++ L + P + C +K G A +Y+ T Y
Sbjct: 428 IDAVLEIRRRFLEAKI--PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATY 485
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
++ K G+ L ++ E+++ S+ V Y II LC G L+ A V+ E
Sbjct: 486 ATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWE 544
Query: 361 KGF 363
KG
Sbjct: 545 KGL 547
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 156/377 (41%), Gaps = 15/377 (3%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ SY +++ L + +G+L M GVE +L+ + ++ + G + +A +F
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ +G+ D L+ +C + ++ A S+ M+ + + ++ TYN V G
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
GR +E + V K GV D T+ L+ + +D E+ E D +
Sbjct: 396 GRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N ++ F+ + + E Y M D P+ TY +I + ++ +AL+MF+E+ +
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 256 HGVLPPTGTITCF---IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
V C+ I LC G A + + G + + + LL + G
Sbjct: 511 SSV----SAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 313 CGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
+L + +++ + + I LC G E A+ V KG + S
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVT--FPST 624
Query: 373 LINKLLDSNNAERAYKL 389
++ L+D+ + AY L
Sbjct: 625 ILKTLVDNLRSLDAYLL 641
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 148/363 (40%), Gaps = 48/363 (13%)
Query: 40 VLRD-MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNR--DTEALNVLLK 96
+LRD +R +G L ++ FV G + AI+V + +N D + ++
Sbjct: 120 ILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVIS 179
Query: 97 CLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
C+ A F S G + N+ TY + + G+ +E+ +++ +E +G
Sbjct: 180 GFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
DC + ++ G + G + +A M++R
Sbjct: 240 FDCVFYSNWIHGYFKGGALVDAL-----MQDR---------------------------- 266
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
EM+ ++ +Y+ +I L + V +AL + +M++ GV P T T I+ LC
Sbjct: 267 --EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
G A V++ + G + Y L+ + + G ++ +M++ G +
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL---FL 391
Y +I+GLC G++ A + + KG + YS L++ + N + ++ FL
Sbjct: 385 YNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 392 KIK 394
+ K
Sbjct: 440 EAK 442
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 155/416 (37%), Gaps = 42/416 (10%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ +Y ++ + + + ++ + R + DL+M +I++ +F+ G +A ++
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
+ E+ + DT ++K C+ + A +FN ++ YN + K G
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKG 530
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEG------------------------------ 166
+ V+ E+ G+ D T L
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLN 590
Query: 167 -----LGRAGRMDEAFEVFCSMKERNCQ---PDTAVYNAMIFNFISVNDFDECMKYYNEM 218
L + G + A EV+ M+ + P T + ++ N S++ + +
Sbjct: 591 DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPST-ILKTLVDNLRSLDAYLLVVNAGETT 649
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
LS+ ++ YT II L + +V AL + GV T T I LC G
Sbjct: 650 LSS---MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
AL ++ G S Y IL+ L K G + + M G ++ +Y I
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+ G C +GQ E+A+ V+ + P S +I + E A +F + K
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 138/344 (40%), Gaps = 48/344 (13%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ Y +I+ L + F + + + GV + + + +++ + G + +A+++F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+L +G+ +L+ LC+ A + +SM K + N+ YN++ G+ K
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ + RV+ V PD T ++G + G M+EA VF K++N D +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
+I F + +E EML ++ + L+ R VDA
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSES----------VVKLINR---VDA--------- 871
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAAL--------VIYKKARRSGCTISMEAYKILLMRL 307
L + +I F+ LC G A+ IY + G +Y+ RL
Sbjct: 872 --ELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLG------SYQ----RL 919
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
L EE+++ Y D +S LC G+LE A
Sbjct: 920 QFLNDVNE-----EEIKKKDYVHDFHSLHSTVSSLCTSGKLEQA 958
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 143/369 (38%), Gaps = 16/369 (4%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y I+ AL ++ VL ++ G+ D+ ++ S G + + L
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK---VAFNVATYNAVAGGWSKFGR 137
+L + LN + LC+R AA V+ M+ K V F +
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDA 638
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+ V+ E + D + + + GL + G + +A + K R +T YN+
Sbjct: 639 Y---LLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNS 695
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
+I E ++ ++ + + P+ TY +I L + +DA ++ D M+ G
Sbjct: 696 LINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
++P + C G A+ + + T ++ K G L
Sbjct: 756 LVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEAL 815
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+++ E ++ S+D + ++I G C G++E A ++ E L S+ + KL
Sbjct: 816 SVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML----------VSESVVKL 865
Query: 378 LDSNNAERA 386
++ +AE A
Sbjct: 866 INRVDAELA 874
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 2/274 (0%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F A + ++I Y V+ L K F ++ +L + + ++ +++ +
Sbjct: 58 FKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYG 117
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NV 122
R G A +VF + E R + N LL +F + GK++ +V
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 177
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
A+YN + G G F E ++ E+E G+ PD TF + L G+ +E +++
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M E+N + D YNA + N +E + ++++ N+ +P++ T+T +I + K
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
+ +A+ + E+ ++G P + +C G
Sbjct: 298 LDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
++ D+ SY ++K L + F+ + ++ ++ G++ D + +I++ G +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGG 131
Q++ + E + RD + N L L + S+F+ +KG ++ +V T+ A+ G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+ G+ +E KE+E +G P F L + +AG ++ A+E+ + + D
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
AV ++ + + DE + +ND
Sbjct: 352 EAVLQEVVDALVKGSKQDEAEEIVELAKTND 382
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 165/417 (39%), Gaps = 45/417 (10%)
Query: 10 KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
+ P+ + Y ++ LG+ M V+ M+ + E + + V+ +F RAG +
Sbjct: 38 RFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRL 97
Query: 70 SKAIQVFGNLNELG------------------------------------MNRDTEALNV 93
AI +F +L+E +N ALN+
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 94 LLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEM---- 148
L+K LC+ + AS VF M + + + +Y + G+ G+ E ++ M
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 149 EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNF--ISVN 206
G D + + L+ L AG +D+A E+ + + + Y+ + S
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
+ + E L P LD+Y+ + T L K+V+ ++ M G P
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 267 CFIKHLCSYGPPFAAL-VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM-Q 324
+K LC G A+ VI K+ + C ++ Y +L+ L GK + ++M +
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSN 381
+ ++ E Y+ ++ GLC GQ A VMEE L K P Y +I L D +
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMD 454
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 165/417 (39%), Gaps = 45/417 (10%)
Query: 10 KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
+ P+ + Y ++ LG+ M V+ M+ + E + + V+ +F RAG +
Sbjct: 38 RFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRL 97
Query: 70 SKAIQVFGNLNELG------------------------------------MNRDTEALNV 93
AI +F +L+E +N ALN+
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 94 LLKCLCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEM---- 148
L+K LC+ + AS VF M + + + +Y + G+ G+ E ++ M
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 149 EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNF--ISVN 206
G D + + L+ L AG +D+A E+ + + + Y+ + S
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
+ + E L P LD+Y+ + T L K+V+ ++ M G P
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 267 CFIKHLCSYGPPFAAL-VIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM-Q 324
+K LC G A+ VI K+ + C ++ Y +L+ L GK + ++M +
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 325 EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSN 381
+ ++ E Y+ ++ GLC GQ A VMEE L K P Y +I L D +
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMD 454
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 13/339 (3%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
SY ++++ GR + + R M+ +G E + I++ +FV +A +VF L
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 80 ---NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + D + ++++ + + A VF+SM GK V + TYN++ S
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFE 292
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
+ E+ ++ +M+ + PD ++ + ++ GRA R +EA VF M + +P Y
Sbjct: 293 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N ++ F ++ + M + P+L +YT +++A + + A + F +
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC-- 313
G P T IK + +Y+K R SG + IL + G+C
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ---TILTTIMDASGRCKN 469
Query: 314 -GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G+ L ++EM+ G D + ++S +LE A
Sbjct: 470 FGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 126/277 (45%), Gaps = 6/277 (2%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV +Y A+ + + G+ N E + + M++ G P T+ + L+ + EA EVF
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 181 CSM---KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
++ K+ +PD +Y+ MI+ + ++++ K ++ M+ + TY +++
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 292
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++V +++D+M R + P + IK AL ++++ +G +
Sbjct: 293 TSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+AY ILL + G +++ M+ D+ Y ++S N +E A +
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
GF P+ + Y LI +N+ E+ +++ K++
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 6/267 (2%)
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
+ K G FN ERV+ + G P+ ++ +E GR G+ + A +F M+ +P
Sbjct: 148 AYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEP 207
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLS---NDCEPNLDTYTRIITALLRRRKVVDAL 247
Y ++ F+ + F E + + +L + +P+ Y +I + A
Sbjct: 208 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 267
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++F M+ GV T T + SY IY + +RS + +Y +L+
Sbjct: 268 KVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
+ + L+++EEM + G + Y ++ G +E A V + P
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 368 LVYSKLINKLLDSNNAERAYKLFLKIK 394
Y+ +++ +++++ E A K F +IK
Sbjct: 385 WSYTTMLSAYVNASDMEGAEKFFKRIK 411
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 126/327 (38%), Gaps = 9/327 (2%)
Query: 23 VIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL 82
+++ A G+ F+ VL + G +++ + +++S+ R G + A +F +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSM----KGKVAFNVATYNAVAGGWSKFGRF 138
G ++LK E A VF ++ K + + Y+ + + K G +
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ +V M GV T+ + E +++ M+ + QPD Y +
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + +E + + EML P Y ++ A V A +F M R +
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P + T + + A +K+ + G ++ Y L+ +K ++
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440
Query: 319 IWEEMQEGGYSSDVEVYEYII--SGLC 343
++E+M+ G ++ + I+ SG C
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRC 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 1/196 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ SY +++KA GR + + V +M GV +I++D+F +G V +A VF
Sbjct: 313 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKF 135
++ + D + +L S + A F +K N+ TY + G++K
Sbjct: 373 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 432
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
++ V ++M G+ + T ++ GR A + M+ PD
Sbjct: 433 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 492
Query: 196 NAMIFNFISVNDFDEC 211
N ++ + ++ +E
Sbjct: 493 NVLLSLASTQDELEEA 508
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 146/350 (41%), Gaps = 2/350 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L M+ G+ D++ ++ +D +AG + +A V L G+++D+ +++ ++ C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
+ A + +S + + N+ Y++ G + +E+ G+ PDC
Sbjct: 353 KVGKPEEAIKLIHSFRLRP--NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
+ ++G GR D+AF+ F ++ + P +I + + M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
+ + ++ TY ++ + ++ ++ DEM G+ P T I + G
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 280 AALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
A I + R G S A+ ++ SK G +W M + DV ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 340 SGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
G C ++E A+++ + L G P ++Y+ LI+ + E+A +L
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 156/400 (39%), Gaps = 68/400 (17%)
Query: 8 AVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
+KH + DI ++ V + L + F VL +++ G+ D + +S V+D F + G
Sbjct: 296 GMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVG 355
Query: 68 HVSKAIQ--------------------------------VFGNLNELGMNRDTEALNVLL 95
+AI+ +F + ELG+ D ++
Sbjct: 356 KPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 96 KCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
C A F ++ K ++ T + G S+FG ++ E V + M+ +G+
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
D T+ + G G+ ++++ FE+ M+ PD A YN +I + + DE +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+E++ P+ +T +I +R +A ++ M + P T + + C
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC- 594
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
KA+R ME +L +L + G DV +
Sbjct: 595 ------------KAQR------MEKAIVLFNKL----------------LDAGLKPDVVL 620
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
Y +I G C++G +E A ++ + +G P+ + L+
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 160/394 (40%), Gaps = 37/394 (9%)
Query: 40 VLRDMRVNGVEADLL--MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
V++D+ ++ +L + SI++D +R V+ A+++ +++ G+ LLK
Sbjct: 186 VMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKE 245
Query: 98 LCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
+ + A M +G+ N A + + G F++ ++ M+ G+ P
Sbjct: 246 ILRVHGLELAREFVEHMLSRGR-HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRP 304
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY- 214
D F VF++ L +AG + EA V +K D+ +++I F V +E +K
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Query: 215 -----------YNEMLSNDCE--------------------PNLDTYTRIITALLRRRKV 243
Y+ LSN C P+ YT +I +
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A Q F +L+ G P T T I +G A +++ + G + + Y L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K + + + +EM+ G S DV Y +I + G ++ A ++ E + +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
PS L ++ +I + + A+ L+ + R
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 109/231 (47%), Gaps = 3/231 (1%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P + + +++ A R S V R+M+ G++ D++ + ++ + + ++K +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGW 132
+ + G++ D N+L+ + R ++ A+ + + + +G V +A + V GG+
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA-FTDVIGGF 558
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
SK G F E + M + PD T L G +A RM++A +F + + +PD
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+YN +I + SV D ++ + M+ PN T+ ++ L +R V
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFV 669
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 146/350 (41%), Gaps = 2/350 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L M+ G+ D++ ++ +D +AG + +A V L G+++D+ +++ ++ C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
+ A + +S + + N+ Y++ G + +E+ G+ PDC
Sbjct: 353 KVGKPEEAIKLIHSFRLRP--NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
+ ++G GR D+AF+ F ++ + P +I + + M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
+ + ++ TY ++ + ++ ++ DEM G+ P T I + G
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 280 AALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
A I + R G S A+ ++ SK G +W M + DV ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 340 SGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
G C ++E A+++ + L G P ++Y+ LI+ + E+A +L
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 156/400 (39%), Gaps = 68/400 (17%)
Query: 8 AVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
+KH + DI ++ V + L + F VL +++ G+ D + +S V+D F + G
Sbjct: 296 GMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVG 355
Query: 68 HVSKAIQ--------------------------------VFGNLNELGMNRDTEALNVLL 95
+AI+ +F + ELG+ D ++
Sbjct: 356 KPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 96 KCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
C A F ++ K ++ T + G S+FG ++ E V + M+ +G+
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
D T+ + G G+ ++++ FE+ M+ PD A YN +I + + DE +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 215 YNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
+E++ P+ +T +I +R +A ++ M + P T + + C
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC- 594
Query: 275 YGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
KA+R ME +L +L + G DV +
Sbjct: 595 ------------KAQR------MEKAIVLFNKL----------------LDAGLKPDVVL 620
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI 374
Y +I G C++G +E A ++ + +G P+ + L+
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 160/394 (40%), Gaps = 37/394 (9%)
Query: 40 VLRDMRVNGVEADLL--MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
V++D+ ++ +L + SI++D +R V+ A+++ +++ G+ LLK
Sbjct: 186 VMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKE 245
Query: 98 LCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
+ + A M +G+ N A + + G F++ ++ M+ G+ P
Sbjct: 246 ILRVHGLELAREFVEHMLSRGR-HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRP 304
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKY- 214
D F VF++ L +AG + EA V +K D+ +++I F V +E +K
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Query: 215 -----------YNEMLSNDCE--------------------PNLDTYTRIITALLRRRKV 243
Y+ LSN C P+ YT +I +
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
A Q F +L+ G P T T I +G A +++ + G + + Y L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ K + + + +EM+ G S DV Y +I + G ++ A ++ E + +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
PS L ++ +I + + A+ L+ + R
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 109/231 (47%), Gaps = 3/231 (1%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P + + +++ A R S V R+M+ G++ D++ + ++ + + ++K +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGW 132
+ + G++ D N+L+ + R ++ A+ + + + +G V +A + V GG+
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA-FTDVIGGF 558
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
SK G F E + M + PD T L G +A RM++A +F + + +PD
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
+YN +I + SV D ++ + M+ PN T+ ++ L +R V
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFV 669
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 13/339 (3%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
SY ++++ GR + + R M+ +G E + I++ +FV +A +VF L
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 80 ---NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+ + D + ++++ + + A VF+SM GK V + TYN++ S
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFE 299
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
+ E+ ++ +M+ + PD ++ + ++ GRA R +EA VF M + +P Y
Sbjct: 300 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N ++ F ++ + M + P+L +YT +++A + + A + F +
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC-- 313
G P T IK + +Y+K R SG + IL + G+C
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ---TILTTIMDASGRCKN 476
Query: 314 -GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G+ L ++EM+ G D + ++S +LE A
Sbjct: 477 FGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 515
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 126/277 (45%), Gaps = 6/277 (2%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
NV +Y A+ + + G+ N E + + M++ G P T+ + L+ + EA EVF
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 181 CSM---KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
++ K+ +PD +Y+ MI+ + ++++ K ++ M+ + TY +++
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 299
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
++V +++D+M R + P + IK AL ++++ +G +
Sbjct: 300 TSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+AY ILL + G +++ M+ D+ Y ++S N +E A +
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
GF P+ + Y LI +N+ E+ +++ K++
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 6/267 (2%)
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
+ K G FN ERV+ + G P+ ++ +E GR G+ + A +F M+ +P
Sbjct: 155 AYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEP 214
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLS---NDCEPNLDTYTRIITALLRRRKVVDAL 247
Y ++ F+ + F E + + +L + +P+ Y +I + A
Sbjct: 215 SAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKAR 274
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++F M+ GV T T + SY IY + +RS + +Y +L+
Sbjct: 275 KVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
+ + L+++EEM + G + Y ++ G +E A V + P
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 368 LVYSKLINKLLDSNNAERAYKLFLKIK 394
Y+ +++ +++++ E A K F +IK
Sbjct: 392 WSYTTMLSAYVNASDMEGAEKFFKRIK 418
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/328 (18%), Positives = 126/328 (38%), Gaps = 9/328 (2%)
Query: 23 VIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL 82
+++ A G+ F+ VL + G +++ + +++S+ R G + A +F +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSM----KGKVAFNVATYNAVAGGWSKFGRF 138
G ++LK E A VF ++ K + + Y+ + + K G +
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+ +V M GV T+ + E +++ M+ + QPD Y +
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I + +E + + EML P Y ++ A V A +F M R +
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P + T + + A +K+ + G ++ Y L+ +K ++
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447
Query: 319 IWEEMQEGGYSSDVEVYEYII--SGLCN 344
++E+M+ G ++ + I+ SG C
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDASGRCK 475
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 1/196 (0%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ SY +++KA GR + + V +M GV +I++D+F +G V +A VF
Sbjct: 320 DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKF 135
++ + D + +L S + A F +K N+ TY + G++K
Sbjct: 380 KSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA 439
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
++ V ++M G+ + T ++ GR A + M+ PD
Sbjct: 440 NDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAK 499
Query: 196 NAMIFNFISVNDFDEC 211
N ++ + ++ +E
Sbjct: 500 NVLLSLASTQDELEEA 515
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 13/321 (4%)
Query: 25 VKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL-NELG 83
V GRRK F M+ ++ + G+ A L +D VRAG + F + N+ G
Sbjct: 150 VDYFGRRKDFKGMLEIIS--KYKGI-AGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYG 206
Query: 84 MNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIER 143
+ RD E+L +++K LCE+ H A + + ++ + + + GW + +E R
Sbjct: 207 LKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATR 266
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF-------EVFCSMKERNCQPDTAVYN 196
+ EM G + + L+ + + R + F +V M+ R +T +N
Sbjct: 267 LAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFN 326
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR- 255
+I N + +E M + M C+P+ +TY +I +L + ++ + +M D+M
Sbjct: 327 VLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSA 386
Query: 256 -HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
+G L F+K LC A+ ++K + +GC ++ Y +L+ ++ +
Sbjct: 387 GYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLT 446
Query: 315 TLLNIWEEMQEGGYSSDVEVY 335
+++E + G + + Y
Sbjct: 447 RANGLYKEAAKKGIAVSPKEY 467
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 114/288 (39%), Gaps = 20/288 (6%)
Query: 122 VATYNAVAGGWS---------KFGRFNEIERVMKEMEAD-GVAPDCTTFGVFLEGLGRAG 171
++ Y +AGG + + GR ++ ++ME D G+ D + + ++ L G
Sbjct: 166 ISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG 225
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
A E PD + + +I + DE + EM E Y
Sbjct: 226 HASIA-EKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 232 RIITALLR--RRKVVDALQ-----MFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVI 284
++ + + R+K LQ + EM GV T T I +LC A+ +
Sbjct: 285 MMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTL 344
Query: 285 YKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY--IISGL 342
+ + GC E Y +L+ L + + G + ++M+ GY + EY + L
Sbjct: 345 FGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKIL 404
Query: 343 CNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
C I +LE+A+ V + G P Y L+ K+ +N RA L+
Sbjct: 405 CGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLY 452
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 36/269 (13%)
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEM-EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
V ++NA+ + + +E + KE+ E G+ PD T+ ++ L R G MD+ +F
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
+++ +PD +N ++ F F E + ++ M S + PN+ +Y + L R
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+K DAL + D M G+ P T I AY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALI----------------------------TAY 308
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
++ L ++ KC + EM+E G + D Y +I LC G L+ AV V EEA+
Sbjct: 309 RVD-NNLEEVMKC------YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKL 389
+Y ++ +L+ + + A +L
Sbjct: 362 HKLLSRPNMYKPVVERLMGAGKIDEATQL 390
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 130/297 (43%), Gaps = 4/297 (1%)
Query: 19 GSYRVIVKALGRRKFFSFMMGVLR-DMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
G Y ++ L K FS + VL+ + + ++++ ++ I++ + +G A ++F
Sbjct: 88 GLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLFD 146
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKF 135
+ EL R ++ N LL + A F + K+ ++ TYN + +
Sbjct: 147 EMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRK 206
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G ++I + +E+E +G PD +F LE R E ++ MK +N P+ Y
Sbjct: 207 GSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N+ + F + + + M + P++ TY +ITA + + ++ ++EM
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
G+ P T T I LC G A+ + ++A + YK ++ RL GK
Sbjct: 327 KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGK 383
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 14 LPEDIG------SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
LPE +G +Y ++KAL R+ ++ + ++ NG E DL+ + +++ F R
Sbjct: 183 LPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR-- 240
Query: 68 HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYN 126
EL + D +++ MK K ++ N+ +YN
Sbjct: 241 ------------RELFVEGD---------------------RIWDLMKSKNLSPNIRSYN 267
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ G ++ +F + ++ M+ +G++PD T+ + ++E + + MKE+
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
PDT Y +I D D ++ E + + + Y ++ L+ K+ +A
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Query: 247 LQM 249
Q+
Sbjct: 388 TQL 390
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 159/371 (42%), Gaps = 11/371 (2%)
Query: 28 LGR-RKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNR 86
LGR RKF ++ R + + +V+ + V + ++ F L +
Sbjct: 118 LGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF 177
Query: 87 -DTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVM 145
DT N LL+ LC+ + A +V++S+K + ++ T+N + GW M
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEM 237
Query: 146 KEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISV 205
K G+ PD T+ ++ + +++A+++ M+E PD Y +I +
Sbjct: 238 K---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 206 NDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
D+ + EM C P++ Y I R++ DA ++ DEM++ G+ P T
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
F + L + +Y + + C + ++ L+ + K + +WE+M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK------LINKLLD 379
G+ S V + ++ LC++ ++E A + E + KG PS + + + L NK +
Sbjct: 415 KGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDE 474
Query: 380 SNNAERAYKLF 390
NN + +F
Sbjct: 475 VNNLIQKMAIF 485
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVAT 124
G ++ A ++ G+L+ R + + ++ LC +V A ++ M KG N A
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN-AV 409
Query: 125 YNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
+N V SK G +E + V+K ME+ G+ PD T+ V + G + G MDEA E+ K
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL-LRRRKV 243
+++ + Y+A+I + + ++DE +K NEM +PN D Y ++I + L+
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDW 529
Query: 244 VDALQMFDEMLRHGV 258
A +F+EM + G+
Sbjct: 530 EKAEVLFEEMKQKGL 544
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 107/260 (41%), Gaps = 10/260 (3%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y + ++AL +R F + V M +GV ++ + ++ F + G +A V+
Sbjct: 268 TYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVY--- 324
Query: 80 NELGMNRDTEA----LNVLLKCLCERS-HVGAASSVFNSMKGKVAF-NVATYNAVAGGWS 133
EL ++ + L+ LC+ + A + + G+ + ++ V
Sbjct: 325 -ELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLC 383
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
+ + + ++ +M + G AP F + + + G +DEA EV M+ R +PD
Sbjct: 384 RMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVY 443
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
Y +I + DE + E + + TY +I + + +AL++ +EM
Sbjct: 444 TYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEM 503
Query: 254 LRHGVLPPTGTITCFIKHLC 273
R GV P I+ C
Sbjct: 504 DRFGVQPNADEYNKLIQSFC 523
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 136/352 (38%), Gaps = 48/352 (13%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
+L +L+ ++ F + G A VF E G + + + L+ LC+RS + A SV
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV- 288
Query: 112 NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
E+++K GV + G + + G
Sbjct: 289 -----------------------------CEKMLK----SGVLSEGEQMGNIITWFCKEG 315
Query: 172 RMDEAFEVF--CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC----EP 225
+ +EA+ V+ KE++ P + A + + ND + + EML +
Sbjct: 316 KAEEAYSVYELAKTKEKSLPPR---FVATLITALCKNDG--TITFAQEMLGDLSGEARRR 370
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS-YGPPFAALVI 284
+ ++ +I +L R R V DA + +M+ G P + H CS G A +
Sbjct: 371 GIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV-HACSKTGDLDEAKEV 429
Query: 285 YKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCN 344
K G + Y +++ +K G I E ++ Y +I G C
Sbjct: 430 LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCK 489
Query: 345 IGQLENAVLVMEEALHKGFCPSRLVYSKLINKL-LDSNNAERAYKLFLKIKH 395
I + + A+ ++ E G P+ Y+KLI L + + E+A LF ++K
Sbjct: 490 IEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQ 541
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 11/332 (3%)
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATY 125
G KA + F L+ G + L +KCL E V A V+N +K ++ +V T
Sbjct: 126 GKAVKAAKSF--LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTC 183
Query: 126 NAVAGGW---SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
N+V G K RF E+ + M E E D C + L G + E +E+
Sbjct: 184 NSVLLGCLKARKLDRFWELHKEMVESEFDSERIRC-----LIRALCDGGDVSEGYELLKQ 238
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
++ P VY +I F + ++ + + M++ + P++ Y +II L +K
Sbjct: 239 GLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKK 298
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
++A +F + G P T I+ C G +A ++ + + G + AY +
Sbjct: 299 QLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
++ K G+ + + EM GY + +I G C+ G+ + A + + G
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG 418
Query: 363 FCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
P+ + Y+ LI N E+ KL+ ++K
Sbjct: 419 VTPNAITYNALIKGFCKENKVEKGLKLYKELK 450
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 6/304 (1%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL+DM G+ + ++ + V+ ++A + + ++ + E D+E + L++ LC
Sbjct: 170 VLKDM---GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALC 224
Query: 100 ERSHVGAASSVFNS-MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ V + +K + Y + G+ + G + + V+ M A P
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
+ ++GL + EA+ +F ++K++ PD VY MI F K + EM
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ PN Y +I +R ++ ++EMLR+G + IK CS+G
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
A I+K +G T + Y L+ K K L +++E++ G Y +
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 339 ISGL 342
+ L
Sbjct: 465 VRNL 468
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 7/274 (2%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
E D + ++ + G VS+ ++ + G++ L+ CE + S
Sbjct: 210 EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 110 VFNSMKGKVAFN----VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
V ++M +A+N + Y + G + E + K ++ G APD + +
Sbjct: 270 VLHTM---IAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIR 326
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
G G + A +++ M ++ +P+ YN MI + +YNEML N
Sbjct: 327 GFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGG 386
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+ + +I K +A ++F M GV P T IK C L +Y
Sbjct: 387 TMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLY 446
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
K+ + G S AY L+ L T LN+
Sbjct: 447 KELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 141/336 (41%), Gaps = 2/336 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+ M GV+ + +V SF G +A+ + + + G+ +T N L+
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 100 ERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ +H+ +F M+ K + + ATYN + +++ + + +E +++EME G+ P+
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 159 TFGVFLEGLGRAGRM-DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
++ + GR +M D A + F MK+ +P + Y A+I + ++ + E
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
M +P+++TYT ++ A R ++++ MLR + T + G
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A + + + G S+ Y +L+ ++ G+ L + +EM D Y
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
+I + + A + + G P Y KL
Sbjct: 631 MIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 154/376 (40%), Gaps = 5/376 (1%)
Query: 4 FFNW-AVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
F+ W +++ P+L V+ LGR + +++ +L ++ D+ + + +
Sbjct: 224 FYEWMSLQEPSLASPRAC-SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISG 282
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAAS-SVFNSMKGK-VAF 120
+ A +V+ ++++ + D +L+ L + +F M K V +
Sbjct: 283 LSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKW 342
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ + + + G E + EME G+ + + ++ ++ ++E +F
Sbjct: 343 SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLF 402
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M+++ +P A YN ++ + D EM EPN+ +YT +I+A R
Sbjct: 403 TEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 241 RKVVD-ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+K+ D A F M + G+ P + + T I G A +++ + G S+E
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y +L + G G L+ IW+ M Y ++ G G A V+ E
Sbjct: 523 YTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFS 582
Query: 360 HKGFCPSRLVYSKLIN 375
G PS + Y+ L+N
Sbjct: 583 KMGLQPSVMTYNMLMN 598
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 152/396 (38%), Gaps = 9/396 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI-QV 75
D+ Y + L + + V M V D + +I++ + +AG +K + ++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSK 134
F ++E G+ + L+K C+ A + M+ K + N YN + ++K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
E+E + EM G+ P T+ + ++ R + D + M++ +P+
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 195 YNAMIFNFISVNDF-DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
Y +I + D + M +P+ +YT +I A A F+EM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
+ G+ P T T + G + I+K R + Y LL +K G
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
++ E + G V Y +++ GQ +++E P + YS +
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 374 INKLLDSNNAERAY---KLFLK---IKHARSLENAR 403
I + + +RA+ K+ +K + RS E R
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLR 667
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMG--VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSK 71
L ++ SY ++ A GR K S M LR M+ G++ + ++ ++ +G K
Sbjct: 445 LEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVSGWHEK 503
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAG 130
A F + + G+ E +L G ++ M + K+ TYN +
Sbjct: 504 AYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLD 563
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G++K G + E V+ E G+ P T+ + + R G+ + ++ M N +P
Sbjct: 564 GFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKP 623
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
D+ Y+ MI+ F+ V DF Y+ M+ + P+ +Y ++ L + K
Sbjct: 624 DSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKT 676
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 155/416 (37%), Gaps = 48/416 (11%)
Query: 23 VIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIV---------VDSFVRAGHVSKAI 73
++KA R+ F+ + ++ N AD+L +V V V +A+
Sbjct: 116 ALIKAKDWRERVKFLTDKILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRAL 175
Query: 74 QVFGNLN-ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
+VF LN + + + +L L + A +F + V V YNA+ G +
Sbjct: 176 EVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVY 235
Query: 133 SKFGRFNEIERVMKEMEA-------------------------------------DGVAP 155
S+ G+F++ + ++ M G+ P
Sbjct: 236 SRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRP 295
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
D T+ L R +D A +VF M+ CQPD YNAMI + E + +
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY 275
E+ P+ TY ++ A R R +++ +M + G T I
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 276 GPPFAALVIYKKAR-RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEV 334
G AL +YK + SG Y +L+ L K + + EM + G ++
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 335 YEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
Y +I G G+ E A L G P L YS +++ LL N +A+ L+
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/388 (18%), Positives = 162/388 (41%), Gaps = 4/388 (1%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y I++A G++K + V+ ++R +G DL + ++ ++ + G +A +F +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVA--GGWSKFGRF 138
G + E++N+LL LC + V ++ + F ++ + + +++ G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQ-DMGFKISKSSILLMLDAFARAGNI 873
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
E++++ M+A G P + + +E L + R+ +A + M+E N + + A++N+M
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ + ++ D+ + ++ Y + EP+ TY +I R R+ + + +M G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
P T I A ++++ G + Y ++ G
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
+ + M+ G + ++ + G + A V+ + L YS +I+ L
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 379 DSNNAERAYKLFLKIKHARSLENARNYW 406
S + + L++K LE W
Sbjct: 1114 RSKDYNSGIERLLEMKK-EGLEPDHRIW 1140
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
V++ L D +Y ++ A R + V DM + + DL + ++ + R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYN 126
++A ++F L G D N LL + V+ M+ K+ F + TYN
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ-KMGFGKDEMTYN 406
Query: 127 AVAGGWSKFGRFNEIERVMKEMEA-DGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
+ + K G+ + ++ K+M+ G PD T+ V ++ LG+A R EA + M +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD 245
+P Y+A+I + +E ++ ML + +P+ Y+ ++ LLR +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 246 ALQMFDEMLRHGVLP 260
A ++ +M+ G P
Sbjct: 527 AWGLYRDMISDGHTP 541
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 142/353 (40%), Gaps = 7/353 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V F H P D+ +Y ++ GR + + ++ + G D + + ++
Sbjct: 317 VKVFEDMEAHRCQP-DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN 121
+F R + K +V+ + ++G +D N ++ ++ + A ++ MKG N
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 122 --VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
TY + K R E +M EM G+ P T+ + G +AG+ +EA +
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
F M +PD Y+ M+ + N+ + Y +M+S+ P+ Y +I L++
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+ D + +M + P + +K C AA + K A +G + +
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECF---DLAARQL-KVAITNGYELENDT 611
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
+L S G+ + E ++E S + E +I C + L A+
Sbjct: 612 LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAAL 664
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 145/381 (38%), Gaps = 37/381 (9%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVS 70
P + + + Y ++ R FS ++ MR G DL+ + ++++ +++G ++
Sbjct: 218 EPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 71 K--AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAV 128
A+++ + G+ D N LL S++ A VF
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVF----------------- 320
Query: 129 AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
++MEA PD T+ + GR G EA +F ++ +
Sbjct: 321 -----------------EDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQ 248
PD YN++++ F + ++ + Y +M + TY II ++ ++ ALQ
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 249 MFDEML-RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++ +M G P T T I L A + + G +++ Y L+
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
+K GK + + M G D Y ++ L + A + + + G PS
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY 543
Query: 368 LVYSKLINKLLDSNNAERAYK 388
+Y +I L+ N ++ K
Sbjct: 544 TLYELMILGLMKENRSDDIQK 564
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
YR++++ L + K ++ +M + +L + + ++ + K +QV+ +
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFN 139
E G+ D N L+ C + M+ + + TY ++ + K
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
+ E++ +E+ + G+ D + + ++ +G +A ++ MK +P A + ++
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
++ S + E K + + + E Y+ +I A LR + ++ EM + G+
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLE 1134
Query: 260 PPTGTITCFIK 270
P TCF++
Sbjct: 1135 PDHRIWTCFVR 1145
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 141/382 (36%), Gaps = 35/382 (9%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D +Y ++ A R + + V + M+ G D + + ++ + + G + A+Q++
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 77 GNLNEL-GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSK 134
++ L G N D VL+ L + + A+++ + M + + TY+A+ G++K
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G+ E E M G PD + V L+ L R +A+ ++ M P +
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Query: 195 YNAMIFNFISVNDFDECMKYYNEM-------------------------------LSNDC 223
Y MI + N D+ K +M ++N
Sbjct: 546 YELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGY 605
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALV 283
E DT I+ + + +A ++ + + H I C AAL
Sbjct: 606 ELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALD 665
Query: 284 IY--KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
Y C S Y+ LL ++ +++ G + V + ++
Sbjct: 666 EYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVV 725
Query: 342 LCNIGQLENAVLVMEEALHKGF 363
C +G E A V+ +A KGF
Sbjct: 726 YCKLGFPETAHQVVNQAETKGF 747
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 36/261 (13%)
Query: 98 LCERSHVGAASSVFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
LC+ + A ++F M K F NV TYN + + GR+++ +++++ M + PD
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
TF + + ++ EA E++ M + P T YN+MI F + D+ + +
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
M S C P++ T++ +I + ++V + +++F EM R G++ T T T I C G
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 277 PPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYE 336
AA LLN EM G + D +
Sbjct: 200 DLDAA--------------------------------QDLLN---EMISCGVAPDYITFH 224
Query: 337 YIISGLCNIGQLENAVLVMEE 357
+++GLC+ +L A ++E+
Sbjct: 225 CMLAGLCSKKELRKAFAILED 245
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
M + ++AD+++ + +VD + G+ A +F ++E G+ + N ++ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 104 VGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
A + M + ++ ++ T++A+ + K + +E E + KEM + P T+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++G + R+D+A + SM + C PD ++ +I + D M+ + EM
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
N TYT +I + + A + +EM+ GV P T C + LCS A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 283 VIYKKARRS 291
I + ++S
Sbjct: 241 AILEDLQKS 249
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 96/236 (40%), Gaps = 34/236 (14%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ + +S +LR M + D++ S ++++FV+ VS+A +++ +
Sbjct: 47 TYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM 106
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFN 139
+ T N ++ C++ V A + +SM K
Sbjct: 107 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK---------------------- 144
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
G +PD TF + G +A R+D E+FC M R +T Y +I
Sbjct: 145 ------------GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
F V D D NEM+S P+ T+ ++ L ++++ A + +++ +
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/251 (17%), Positives = 89/251 (35%), Gaps = 35/251 (13%)
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY------------ 230
M + + + D + A++ + + EM PN+ TY
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 231 -----------------------TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
+ +I A ++ RKV +A +++ EMLR + P T T
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 268 FIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
I C A + GC+ + + L+ K + + I+ EM G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 328 YSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAY 387
++ Y +I G C +G L+ A ++ E + G P + + ++ L +A+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 388 KLFLKIKHARS 398
+ ++ +
Sbjct: 241 AILEDLQKSED 251
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 66/175 (37%)
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
T I+ L + ++A +F EM G+ P T C I C G A + +
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
+ + L+ K K I++EM Y +I G C ++++
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 351 AVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
A +++ KG P + +S LIN + + ++F ++ + N Y
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 149/387 (38%), Gaps = 36/387 (9%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAI 73
+P D ++ ++ G S +L+ M G+ D +I++ AG + A+
Sbjct: 336 VPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAAL 395
Query: 74 QVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM------------------- 114
+ + + ++G+ DT +L LC+R V +V M
Sbjct: 396 EYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 115 -------KGKVAF---------NVATYNAVAGGWSKFGRFNEIERVM-KEMEADGVAPDC 157
+ K F + T AV +++ G + E E V + G D
Sbjct: 456 VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDV 515
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ V ++ G+A ++A +F MK + PD YN++ V+ DE + E
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 218 MLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGP 277
ML + C+P TY +I + +R + DA+ +++ M + GV P I G
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A+ ++ G + L+ SK+G ++++M++ DV
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFC 364
++S ++G + A + KG C
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKGTC 722
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 161/398 (40%), Gaps = 9/398 (2%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F + + P P ++ ++ G+ + + +M +GV D + + ++ +
Sbjct: 291 FASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTC 350
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NV 122
GH+S+A + + E G++ DT+ N+LL + + AA + ++ F +
Sbjct: 351 GTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDT 410
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA---FEV 179
T+ AV + E+E V+ EM+ + + D + V ++ G + +A FE
Sbjct: 411 VTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER 470
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK-YYNEMLSNDCEPNLDTYTRIITALL 238
F + +C + A+I + + E +Y + + ++ Y +I A
Sbjct: 471 F----QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG 526
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
+ + AL +F M G P T + L A I + SGC +
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
Y ++ +LG ++++E M++ G + VY +I+G G +E A+
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
G + +V + LI E A +++ K+K +
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDS 684
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 146/376 (38%), Gaps = 19/376 (5%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ + R S + + M GV+ + ++ +++ F +G V +AIQ F +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRF 138
E G+ + L L+K + + A V++ MK + +VA N++ + G
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+E E + + G D +F + G +DEA EV M+E D +N +
Sbjct: 707 SEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Query: 199 IFNFISVNDFDECMKYYNEML-SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
+ + + EC + ++EML + T+ + T L + +A+
Sbjct: 766 MACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEA 825
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRS-----GCTISME--AYKILLMRLSKL 310
T IT + F+A+ +Y A S I E AY ++ S
Sbjct: 826 KPLATPAITATL---------FSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSAS 876
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
G L + MQE G D+ Y++ G +E V PS+ ++
Sbjct: 877 GDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLF 936
Query: 371 SKLINKLLDSNNAERA 386
+ + + +N + A
Sbjct: 937 KAVRDAYVSANRQDLA 952
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 132/336 (39%), Gaps = 18/336 (5%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
V+ S +R+ S I+ L L +N + VLLK V F S + V
Sbjct: 85 VIPSILRSLDSSTDIET--TLASLCLNLSPKEQTVLLKEQTRWERVLRVFRFFQSHQSYV 142
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
NV YN V + G+++E+ EM +GV P T+G+ ++ G+AG + EA
Sbjct: 143 P-NVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
M +R PD ++ F + +FD +++ + + +LD+
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGS 261
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
+ V + E+ + G P F S P +K R +
Sbjct: 262 AQSPVNLKQFLSMELFKVGARNPIEKSLHFASG--SDSSP-------RKPRLTS------ 306
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
+ L+ K G+ N++ EM + G D + +I G L A ++++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
KG P Y+ L++ D+ + E A + + KI+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR 402
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 42/373 (11%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
++D++ ++G + +A + F + E G+ T N ++ +G +S+ +MK
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC 363
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERV---MKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
A + TYN + S + N+IER KEM+ DG+ PD ++ L ++E
Sbjct: 364 APDTRTYNILI---SLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE------MLSNDCEPNLDT 229
A + M + N + D +A+ ++ ++ ++ M S N+D
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDA 480
Query: 230 YTR-----------IITALLRRRKVVD----------------ALQMFDEMLRHGVLPPT 262
Y I + +R V++ A ++F+ M+ +GV P
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 263 GTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEE 322
T ++ L S P +K R +G Y ++ KLG+ +++E
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 323 MQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLI---NKLLD 379
M E DV VY +I+ + G ++ A+ +E G + ++Y+ LI K+
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 380 SNNAERAYKLFLK 392
+ AE Y+ L+
Sbjct: 661 LDEAEAIYRKLLQ 673
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 8/259 (3%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V F W ++ Y ++++ LG+ + ++ + +M G++ ++D
Sbjct: 171 VEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLID 230
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF-------NSM 114
+ + G A+ G ++++GM D ++L+ + A F N
Sbjct: 231 VYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKA 290
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
V + TYN + + K G+ E K M +G+ P TF + G G++
Sbjct: 291 DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLG 350
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
E + +MK +C PDT YN +I ND + Y+ EM + +P+ +Y ++
Sbjct: 351 EVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 235 TALLRRRKVVDALQMFDEM 253
A R V +A + EM
Sbjct: 410 YAFSIRHMVEEAEGLIAEM 428
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 15/314 (4%)
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK- 115
++++ ++ + KA ++F ++ G+ D N L++ L M+
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 116 -GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
G V+ + Y AV + K G+ N E V KEM + PD +GV + G +
Sbjct: 569 TGYVS-DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCE----PNLDTY 230
+A +MKE ++ +YN++I + V DE Y ++L + C P++ T
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTS 686
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY---GPPFAALVIYKK 287
+I R V A +FD M + G F LC Y G A I K+
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRG----EANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 288 ARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQ 347
R +Y +L + G+ + ++EM G D ++ + + L +G
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 348 LENAVLVMEEALHK 361
+ AV +EE K
Sbjct: 803 SKKAVRKIEEIRKK 816
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ Y V++ A M + M+ G+ + ++ + ++ + + G++ +A ++
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 77 GNLNELGMNR----DTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
L + N+ D N ++ ERS V A ++F+SMK + N T+ + +
Sbjct: 669 RKLLQ-SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMY 727
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
K GRF E ++ K+M + D ++ L GR EA E F M QPD
Sbjct: 728 KKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDD 787
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
+ + ++ + + + ++ E+ + + L+ + +++L+ VD L
Sbjct: 788 STFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGDCVDEL 842
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 108/223 (48%), Gaps = 5/223 (2%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V ++M +E D+++ +++++F G+V +A+ + E G+ ++ N L+K
Sbjct: 597 VYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYT 656
Query: 100 ERSHVGAASSVFNSMK---GKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
+ ++ A +++ + K + +V T N + +S+ + E + M+ G A
Sbjct: 657 KVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN 716
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
+ TF + L + GR +EA ++ M+E D YN+++ F F E ++ +
Sbjct: 717 E-FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
EM+S+ +P+ T+ + T L++ A++ +E+ + +
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 156/382 (40%), Gaps = 10/382 (2%)
Query: 17 DIG-SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQV 75
D+G +YR +V+ L V+ DM +G++ D+ + S +++ + ++ KA+ V
Sbjct: 289 DLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDV 348
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSK 134
F + + + ++ +L+C C+ + A +F + ++ + YN K
Sbjct: 349 FNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGK 408
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
G+ E + +EM G+APD + + G G+ +AF++ M PD +
Sbjct: 409 LGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVI 468
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
YN + + E + M + +P T+ +I L+ + +D + F E L
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE-LDKAEAFYESL 527
Query: 255 RHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL-SKLGKC 313
H ++ +K C+ G A +++ R + Y L L ++
Sbjct: 528 EHKSRENDASM---VKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
++ + M + G + +Y +I C + + A E + K P Y+ +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 374 INKLLDSNNAERAYKLFLKIKH 395
IN N ++AY LF +K
Sbjct: 642 INTYCRLNEPKQAYALFEDMKR 663
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 145/388 (37%), Gaps = 44/388 (11%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
DI Y V+ L L+ M GV+ + ++V++ + AG + KA +
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 77 GNLNELGMNRDTEALN----------------------------VLLKCLC-ERSHVGAA 107
+L D + L LC E+ ++ A
Sbjct: 525 ESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKA 584
Query: 108 SSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ + M K V + Y + G W + + + + + PD T+ + +
Sbjct: 585 QDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
R +A+ +F MK R+ +PD Y+ ++ + D + EM + D P+
Sbjct: 645 YCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NSDPELDMKREMEAFDVIPD 697
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ YT +I + +F +M R ++P T T +K+ + +
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSR 750
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ + + Y +L+ K+G G I+++M E G D Y +I+ C +G
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLI 374
L+ A ++ + + G P + Y+ LI
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALI 838
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 121/301 (40%), Gaps = 15/301 (4%)
Query: 68 HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYN 126
++SKA + + +LG+ + L+ C ++V A F + K+ ++ TY
Sbjct: 580 YISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYT 639
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ + + + + ++M+ V PD T+ V L D ++ M+
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAF 692
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDA 246
+ PD Y MI + +ND + + +M + P++ TYT ++ R
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPER------ 746
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+ EM V P T I C G A I+ + SG Y L+
Sbjct: 747 -NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIAC 805
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
K+G I++ M E G DV Y +I+G C G + AV +++E L KG P+
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPT 865
Query: 367 R 367
+
Sbjct: 866 K 866
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 158/427 (37%), Gaps = 40/427 (9%)
Query: 10 KHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
KH P D+ Y I++ + + V M + +++S ++ + + G+
Sbjct: 319 KHGIDP-DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNF 377
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAV 128
S+A +F E ++ D NV L + V A +F M GK +A +V Y +
Sbjct: 378 SEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTL 437
Query: 129 AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
GG G+ ++ +M EM+ G PD + V GL G EAFE M+ R
Sbjct: 438 IGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGV 497
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN------------LD-------- 228
+P +N +I I + D+ +Y + E + LD
Sbjct: 498 KPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIR 557
Query: 229 --------TYTRIITALLRRRKVVDALQ-MFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
Y + T+L + + Q + D M + GV P I C
Sbjct: 558 LEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVR 617
Query: 280 AALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
A ++ + Y I++ +L + ++E+M+ DV Y ++
Sbjct: 618 KAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Query: 340 SGLCNIGQLENAVLVMEEALHK-GFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARS 398
+ + L M+ + P + Y+ +IN+ N+ ++ Y LF +K
Sbjct: 678 NS--------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREI 729
Query: 399 LENARNY 405
+ + Y
Sbjct: 730 VPDVVTY 736
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 36/274 (13%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF V +P D+ +Y +++ R + DM+ V+ D++ S++++S
Sbjct: 622 FFEILVTKKIVP-DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSD 680
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL---------CERSHVGAASSVFNSM 114
EL M R+ EA +V+ + C + + ++F M
Sbjct: 681 ----------------PELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDM 724
Query: 115 KGK-VAFNVATYNAVAGGWSKFGRFNEIER-VMKEMEADGVAPDCTTFGVFLEGLGRAGR 172
K + + +V TY + N+ ER + +EM+A V PD + V ++ + G
Sbjct: 725 KRREIVPDVVTYTVLLK--------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+ EA +F M E PD A Y A+I + E ++ M+ + +P++ YT
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
+I R V+ A+++ EML G+ P +++
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 158/401 (39%), Gaps = 66/401 (16%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVV 60
MV F W ++ L D +Y ++V+AL R + E +LS ++
Sbjct: 200 MVVGFFWEIERLGLDADAHTYVLVVQALWRN---------------DDKEELEKLLSRLL 244
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
S R + + + L +N+ T+ LL+ L + N + K
Sbjct: 245 ISETR----NPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDA----------NILVDKSDL 290
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+A Y V G R + E V+ +ME G+ PD + +EG + + +A +VF
Sbjct: 291 GIA-YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVF 349
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M ++ + + + ++++ + + +F E + E + + Y AL +
Sbjct: 350 NKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKL 409
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
KV +A+++F EM G+ P T I GC +
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLI---------------------GGCCLQ---- 444
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
GKC ++ EM G + D+ +Y + GL G + A ++ +
Sbjct: 445 ----------GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLEN 401
+G P+ + ++ +I L+D+ ++A + ++H +S EN
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH-KSREN 534
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 110/293 (37%), Gaps = 36/293 (12%)
Query: 29 GRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDT 88
+ + S +L M GVE + M ++ ++ R +V KA + F L + D
Sbjct: 576 AEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDL 635
Query: 89 EALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKE 147
+++ C + A ++F MK + V +V TY+ + + + +E
Sbjct: 636 FTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD-------MKRE 688
Query: 148 MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFN------ 201
MEA V PD + + + + + + +F MK R PD Y ++ N
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL 748
Query: 202 ----------------------FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+ D E + +++M+ + +P+ YT +I +
Sbjct: 749 SREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
+ +A +FD M+ GV P T I C G A+ + K+ G
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 137/343 (39%), Gaps = 17/343 (4%)
Query: 51 ADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSV 110
A+L M +D F RA + LG D +ALN L+ +
Sbjct: 157 ANLDMFDEAIDIFFRAYY------------SLGRAPDIKALNFLISRMIASGRSDMVVGF 204
Query: 111 FNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
F + + + + TY V + E+E+++ + C + F+EGL
Sbjct: 205 FWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCL 264
Query: 170 AGRMDEAFEVFCSMKERNCQPDTA----VYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
D A+ + +++ N D + Y ++ ++ +M + +P
Sbjct: 265 NQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDP 324
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
++ Y+ II + + A+ +F++ML+ ++ ++ C G A ++
Sbjct: 325 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF 384
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
K+ R + ++ Y + L KLGK + ++ EM G + DV Y +I G C
Sbjct: 385 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 444
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
G+ +A +M E G P ++Y+ L L + A+ A++
Sbjct: 445 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFE 487
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 44/393 (11%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
T ++ LP D+ +Y ++K R V R MR G+E D+ + ++
Sbjct: 34 TLLIDGIRLGVLP-DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISG 92
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV 122
+ +++ +Q+F + G++ D + N L+ C
Sbjct: 93 AAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC------------------------- 127
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKE-MEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
+ K GR E +++ E + G+ P T+ + L+ L ++G D A E+F
Sbjct: 128 ---------YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK 178
Query: 182 SMKERNCQPDTAVYNAMIFNFIS---VNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
+K R +P+ YN +I V D M+ E+ + PN TYT ++
Sbjct: 179 HLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMR---ELKKSGYTPNAVTYTTMLKMYF 234
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC-TISM 297
+ +++ LQ+F +M + G + L G A + RSG + +
Sbjct: 235 KTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDI 294
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+Y LL K G + ++ EE++ G D + I++GL NIG A +
Sbjct: 295 VSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLAC 354
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G PS + + LI+ L + + +RA +LF
Sbjct: 355 IGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 4/310 (1%)
Query: 88 TEALNVLLKCLCE-RSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
T+ LN+ + LC+ R+ A + + + ++ V +V TYN + G+++F +E V +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
M G+ PD TT+ + G + ++ ++F M PD YN ++ + +
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 207 DFDECMKYYNEMLS-NDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTI 265
E K +E + P +DTY ++ AL + +A+++F L+ V P T
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH-LKSRVKPELMTY 191
Query: 266 TCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQE 325
I LC + + ++ ++SG T + Y +L K + L ++ +M++
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLV-YSKLINKLLDSNNAE 384
GY+ D ++S L G+ E A M E + G +V Y+ L+N N +
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLD 311
Query: 385 RAYKLFLKIK 394
L +I+
Sbjct: 312 AVDDLLEEIE 321
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/390 (18%), Positives = 164/390 (42%), Gaps = 6/390 (1%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
++ + D+ +Y ++ + + ++ + +M +G+ D+ + ++ + + G
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 69 VSKAIQVFG-NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNA 127
+A ++ +++ G+ + N+LL LC+ H A +F +K +V + TYN
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNI 193
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ G K R ++ +M+E++ G P+ T+ L+ + R+++ ++F MK+
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEML-SNDCEPNLDTYTRIITALLRRRKVVDA 246
D A++ I +E + +E++ S ++ +Y ++ + +
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+ +E+ G+ P T T + L + G A G S+ L+
Sbjct: 314 DDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDG 373
Query: 307 LSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPS 366
L K G + ++ M+ D Y ++ LC G+L A ++ +KG
Sbjct: 374 LCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIP 429
Query: 367 RLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+++ + ++ + + A K +KIK A
Sbjct: 430 SSARRAVLSGIRETVSYQAARKTHIKIKAA 459
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 158/359 (44%), Gaps = 8/359 (2%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
V ++M G ++ ++V+ SF + + +A+ VF + + G+ + + N+++ C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 100 ERSHVGAASSVFNSM---KGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
+ + A + M G V+ N TYN+V G+ K GR + ER+ +M GV
Sbjct: 265 KTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
+ T+G ++ GRAG DEA + M + +T +YN++++ D + M
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY 275
+M S + + + T ++ L R V +A++ ++ ++ + H
Sbjct: 385 RDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRD 444
Query: 276 GPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVY 335
A I G ++ ++ L+ K GK L I++ M + +S++ +Y
Sbjct: 445 KKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Query: 336 EYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
I++GL G A V+ K + Y+ L+N+ L + N E A + K++
Sbjct: 505 NSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQ 559
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F + L EDI + ++ R K + +L M V G+ D + ++D ++
Sbjct: 418 FQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYL 477
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVAT 124
+ G + +A++++ + ++ + N ++ L +R GAA +V N+M+ K ++ T
Sbjct: 478 KEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK---DIVT 534
Query: 125 YNAVAGGWSKFGRFNEIERVMKEME-ADG-VAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
YN + K G E + ++ +M+ DG + TF + + L + G ++A EV
Sbjct: 535 YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKF 594
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M ER PD+ Y +I +F ++ ++ ++ ++ P+ Y I+ LL R
Sbjct: 595 MVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 42/261 (16%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
M VLRDM ++ D +IVV R G+V +A++ ++E + D N L+
Sbjct: 381 MSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Query: 98 LCERSHVGAASSVFNSM---------------------KGKV---------------AFN 121
+ A + SM +GK+ N
Sbjct: 441 FVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSN 500
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
+ YN++ G SK G E V+ ME D T+ L + G ++EA ++
Sbjct: 501 LVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILS 556
Query: 182 SMKERNCQPDTAV--YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M++++ + ++ +N MI + +++ + M+ P+ TY +IT+ +
Sbjct: 557 KMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Query: 240 RRKVVDALQMFDEMLRHGVLP 260
R +++ D ++ GV P
Sbjct: 617 HRSQEKVVELHDYLILQGVTP 637
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 5/260 (1%)
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
K + + +++ +A G +PD F + + G A+EV +
Sbjct: 127 KLSPLHVLSGLIRSYQACGSSPD--VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVH 184
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
N + ++VN+ D K Y EM S N++T+ +I + + K+ +AL +F M
Sbjct: 185 ALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRM 244
Query: 254 LRHGVLPPTGTITCFIKHLCSYGP-PFAALVIYKKARRSGCTISMEA--YKILLMRLSKL 310
L+ GV P + I C G FA ++ K SG +S A Y ++ K
Sbjct: 245 LKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKA 304
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
G+ I +M + G + Y ++ G + A+ + +E KG + ++Y
Sbjct: 305 GRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIY 364
Query: 371 SKLINKLLDSNNAERAYKLF 390
+ ++ L + E A +
Sbjct: 365 NSIVYWLFMEGDIEGAMSVL 384
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%)
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
G D T+ L+ G AGR+ + VF MKE+ DT Y ++I S D D
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 212 MKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
M+ + EM N CEP + +YT + L +V +A +++ EMLR V P T T +++
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 272 LCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
L + G AL I+ K + G A IL+ + K G+ + + M+E G
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG 292
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 150/406 (36%), Gaps = 76/406 (18%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FFNWA + + G + D + ++D F
Sbjct: 108 FFNWAAQ-----------------------------------IKGFKHDHFTYTTMLDIF 132
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNV 122
AG + VF + E G+ DT L+ + V A ++ M+ V
Sbjct: 133 GEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTV 192
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
+Y A GR E V KEM V+P+C T+ V +E L G+ +EA ++F
Sbjct: 193 VSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFK 252
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M+E QPD A N +I + + + +L Y + +LR
Sbjct: 253 MQEIGVQPDKAACNILIAKALKFGE----TSFMTRVL---------VYMKENGVVLRYPI 299
Query: 243 VVDALQMF------DEMLRHGVLPPTGTITCFIKHLCSYG---PPFAALVIYKKARRSGC 293
V+AL+ D++LR I+ ++ LCS P A + K + S
Sbjct: 300 FVEALETLKAAGESDDLLRE----VNSHIS--VESLCSSDIDETPTAEVNDTKNSDDSRV 353
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
S +LLM+ L LLN +M++ D V II C+ + E A L
Sbjct: 354 ISS-----VLLMK-QNLVAVDILLN---QMRDRNIKLDSFVVSAIIETNCDRCRTEGASL 404
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAER---AYKLFLKIKHA 396
+ +L G + Y LI L SN + K +K +H+
Sbjct: 405 AFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHS 450
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 7/202 (3%)
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN---SMKGKVAFNVATYNAVAGGWSK 134
L LG+ D+ +N +LK + A FN +KG + TY + + +
Sbjct: 79 QLPHLGVRWDSHIINRVLKA---HPPMQKAWLFFNWAAQIKG-FKHDHFTYTTMLDIFGE 134
Query: 135 FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
GR + V M+ GV D T+ + + +G +D A ++ M++ C+P
Sbjct: 135 AGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVS 194
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
Y A + + +E + Y EML + PN TYT ++ L+ K +AL +F +M
Sbjct: 195 YTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQ 254
Query: 255 RHGVLPPTGTITCFIKHLCSYG 276
GV P I +G
Sbjct: 255 EIGVQPDKAACNILIAKALKFG 276
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 162/412 (39%), Gaps = 77/412 (18%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
SY ++ A+ +K + + ++ ++ +G + D + + V+++F +G++ A+Q +
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK----VAFNVATYNAVAGGWSKF 135
ELG+N T N L+K +S + + M + V N+ T+N + W K
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 136 GRFNEIERVMKEMEADGVAPDCTTF----------------------------------- 160
+ E V+K+ME GV PD T+
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 161 --GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
G+ + G R GR+ + MKE + + V+N++I F+ V D D + M
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
+ + ++ TY+ ++ A + A Q+F EM++ GV P + K P
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
KKA T+ +E+ +V ++ +
Sbjct: 382 -------KKAEELLETLIVES-----------------------------RPNVVIFTTV 405
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
ISG C+ G +++A+ V + G P+ + L+ L+ +A ++
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 144/346 (41%), Gaps = 41/346 (11%)
Query: 86 RDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERV 144
R + L+ L ER A +VF ++ + ++ +Y + + ++ I +
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
+ E+E G D F + +G M++A + MKE P T+ YN +I +
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 205 VNDFDECMKYYNEMLSN---DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
+ + + ML D PN+ T+ ++ A +++KV +A ++ +M GV P
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 262 TGT----ITCFIKH---LCSYGPPFAALVIYKKARRSG--CTISMEAY------------ 300
T T TC+++ + + +V+ +KA+ +G C I + Y
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 301 --KILLMRL-SKLGKCGTLLNIWEE-------------MQEGGYSSDVEVYEYIISGLCN 344
++ MR+ + L +L+N + E M+E +DV Y +++ +
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 345 IGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
G +E A V +E + G P YS L + + ++A +L
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 388
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG- 116
IVV + R G V ++ + E+ + + N L+ E V MK
Sbjct: 265 IVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKEC 324
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
V +V TY+ V WS G + +V KEM GV PD + + +G RA +A
Sbjct: 325 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 384
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
E+ ++ + +P+ ++ +I + S D+ M+ +N+M PN+ T+ ++
Sbjct: 385 EELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGT 264
L ++ A ++ M GV P T
Sbjct: 444 YLEVKQPWKAEEVLQMMRGCGVKPENST 471
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 135/338 (39%), Gaps = 44/338 (13%)
Query: 9 VKHPALPEDIGSYRVIVKA---LGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVR 65
+K L +Y ++K G+ + S ++ ++ + V ++ +++V ++ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 66 AGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH-VGAASSVFNSM--KGKVAFNV 122
V +A +V + E G+ DT N + C ++ V A S V M K K N
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 123 ATYNAVAGGWSKFGRFNE---IERVMKEM--------------------EADG------- 152
T V GG+ + GR + R MKEM + DG
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 153 -----VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND 207
V D T+ + AG M++A +VF M + +PD Y+ + ++ +
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 208 FDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
+ + E L + PN+ +T +I+ + DA+++F++M + GV P T
Sbjct: 381 PKKAEELL-ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 268 FIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLM 305
+ P+ A + + R GC + E LL+
Sbjct: 440 LMWGYLEVKQPWKAEEVLQMMR--GCGVKPENSTFLLL 475
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL M+ V+AD++ S V++++ AG++ KA QVF + + G+ D A ++L K
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
A + ++ + NV + V GW G ++ RV +M GV+P+ T
Sbjct: 377 RAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 436
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
F + G + +A EV M+ +P+ + + + + DE K N +
Sbjct: 437 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Query: 220 SNDCE 224
D E
Sbjct: 497 CKDIE 501
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 161/387 (41%), Gaps = 24/387 (6%)
Query: 24 IVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV------------------- 64
I + + R FFSF + L G DL+ + IV+ +
Sbjct: 165 IFEGIRFRNFFSFDIA-LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCC 223
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVA 123
R G VS+A QV G + G++ ++L+ A +FN M + + N+
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TY ++ G+ G +E V+ +++++G+APD + + R GR +EA +VF S+
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
++R PD + +++ + FD + + + + +L T + +
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYN 400
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKIL 303
AL++ M T T ++ LC G P AA+ +YK + + + +
Sbjct: 401 SYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAI 460
Query: 304 LMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGF 363
+ L +LGK T +++++ Y DV Y I GL ++E A + + G
Sbjct: 461 IDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI 520
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKLF 390
P+R Y +I+ L E+ K+
Sbjct: 521 YPNRRTYRTIISGLCKEKETEKVRKIL 547
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 123/263 (46%), Gaps = 7/263 (2%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGR--RKFFSFMMGVLRDMRVNGVEADLLMLSIV 59
+ FF W K D ++ +V + + R+++S + ++ ++++G E + ++
Sbjct: 56 LNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYS-IDRIIERLKISGCEIKPRVFLLL 114
Query: 60 VDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-- 117
++ F R KAI+V+ ++ G +T A+N+++ + + V A +F ++ +
Sbjct: 115 LEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF 174
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+F++A + + G G ++ V+K M +G P+ FG L R G + EAF
Sbjct: 175 FSFDIALSHFCSRGGR--GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF 232
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
+V M V++ ++ F + + + +N+M+ C PNL TYT +I
Sbjct: 233 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGF 292
Query: 238 LRRRKVVDALQMFDEMLRHGVLP 260
+ V +A + ++ G+ P
Sbjct: 293 VDLGMVDEAFTVLSKVQSEGLAP 315
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 119/272 (43%), Gaps = 3/272 (1%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
V FN ++ P ++ +Y ++K VL ++ G+ D+++ ++++
Sbjct: 267 VDLFNKMIQIGCSP-NLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN 121
++ R G +A +VF +L + + D +L LC + + + F+
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG--TDFD 383
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
+ T N ++ +SK G + +V+ M A DC T+ V+L L R G A +++
Sbjct: 384 LVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
+ + D ++A+I + I + ++ + + + ++ +YT I L+R +
Sbjct: 444 IIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAK 503
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
++ +A + +M G+ P T I LC
Sbjct: 504 RIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G + DL+ +++ + F + G+ S A++V ++ D V L LC AA
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA 438
Query: 108 SSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
++ + K K + ++A+ + G++N + K + D ++ V ++G
Sbjct: 439 IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKG 498
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
L RA R++EA+ + C MKE P+ Y +I + ++ K E + E +
Sbjct: 499 LVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Query: 227 LDTYTRIITALLRRR 241
+T ++ + L R R
Sbjct: 559 PNTKFQVYSLLSRYR 573
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 155/400 (38%), Gaps = 44/400 (11%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLR-DMRVNGVEAD----LLMLSI 58
FF + ++ D S ++ L R + S ++R +R+ + D L +
Sbjct: 91 FFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRS 150
Query: 59 VVDSFVRAG-----------------HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
++ S+ R G + A+ V L G+N N L+ + R
Sbjct: 151 LIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRR 210
Query: 102 SHVGAASSVF--------------NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKE 147
++ M GK+ N T+N++ + + G +ER+ +E
Sbjct: 211 RGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWRE 270
Query: 148 MEAD-GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
ME + G +P+ ++ V +E G M EA +V+ MK R D YN MI S
Sbjct: 271 MEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNF 330
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
+ + + + +M E TY ++ + V L ++ EM R G TI
Sbjct: 331 EVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIE 390
Query: 267 CFIKHLCSYGPPF----AALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEE 322
++ LC AA ++ R + S Y++L+ RL + GK LNI E
Sbjct: 391 ALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAE 450
Query: 323 MQEGGYSSDVEVYEYIISGLCNIGQLENAVLV---MEEAL 359
M G+ E Y I G +G E + L+ M E+L
Sbjct: 451 MVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAESL 490
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 5/206 (2%)
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRIITALLRRRKVVDAL 247
+P+ +N+M+ +F + + + + EM C PN+ +Y ++ A R + +A
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAE 301
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++++EM GV+ I LCS A +++ G + Y+ L+
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGY 361
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCN--IGQ--LENAVLVMEEALHKGF 363
K G + L ++ EM+ G+ +D E ++ GLC+ GQ +E A +V + F
Sbjct: 362 CKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMF 421
Query: 364 CPSRLVYSKLINKLLDSNNAERAYKL 389
PSR Y L+ +L + +RA +
Sbjct: 422 YPSRNCYELLVKRLCEDGKMDRALNI 447
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 153/387 (39%), Gaps = 2/387 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVL-RDMRVNGVEADLLMLSIVV 60
+ FF+WA + P ++ I K L K + M+ L R + L + +V
Sbjct: 130 LKFFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALV 189
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
+ AG A+Q FGN+ G++ D+ +VLL L E + +F+ + +
Sbjct: 190 VGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFV 249
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
T++ + + K G+ +E E ++ + + A + G+ ++ L + EA ++
Sbjct: 250 CAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLL 309
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS-NDCEPNLDTYTRIITALLR 239
+K YN I I + + ++ CE + Y ++ LL+
Sbjct: 310 DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+ + EM+ GV P T+ + C G AL +Y+ G + +
Sbjct: 370 ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMS 429
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y L+ L ++ + + G+ + + + + LC G+ + A ++ A
Sbjct: 430 YNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAA 489
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERA 386
+ P R+ K+I+ L D E A
Sbjct: 490 ERDLLPKRIAGCKIISALCDVGKVEDA 516
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 140/361 (38%), Gaps = 21/361 (5%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L +M V GV + ++ + F +AG V +A++++ + +E+G + N L+ LC
Sbjct: 379 ILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLC 438
Query: 100 ERSHVGAASSVFNS------MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
V A V G F+ T G R E V+ E D +
Sbjct: 439 ANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR----ELVIAAAERD-L 493
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
P + L G++++A + + ++ ++I+ I++ D K
Sbjct: 494 LPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAK 553
Query: 214 YYNEMLSNDCEPNLDTYTRIITALLR----RRKVVDALQMFD-EMLRHGVLPPTGTITCF 268
M P Y +I + + L F + H V F
Sbjct: 554 LIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKV----QAYNLF 609
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
I+ G P A ++Y R G T ++ + ++L K K L+ + +++E G
Sbjct: 610 IEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGK 669
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
+ +Y+ +I GLC +L++A+ +EE +G PS Y I KL + + A
Sbjct: 670 TKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVG 728
Query: 389 L 389
L
Sbjct: 729 L 729
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 35/260 (13%)
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM---------------IFNFISVNDF-- 208
G AGR D A + F +M+ R D+ Y+ + IF+ ISV F
Sbjct: 191 GYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVC 250
Query: 209 -----------------DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
DE Y +L ND ++ AL +RK +A ++ D
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYG-PPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
E+ G + +I+ L G A + K + GC + + Y ++ +L K
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKE 370
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+ +I EM G S + + + C G ++ A+ + GF P+ + Y
Sbjct: 371 NNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Query: 371 SKLINKLLDSNNAERAYKLF 390
+ LI+ L + + E+AY +
Sbjct: 431 NYLIHTLCANESVEQAYDVL 450
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+ + RV+ M +G+ PD T + + L GR+DEA ++ + E++ PDT YN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 198 MIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
++ + D ++ +EM + D +P+L ++T +I + + + +A+ + ++
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTL 316
G P +K C+ A+ +YKK + G Y L+ LSK G+
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 317 LNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ M + GY D Y +++G+C G
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 2/203 (0%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL M NG+E D + I V S G V +A + L E DT N LLK LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 100 ERSHVGAASSVFNSMKGK--VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
+ + + M+ V ++ ++ + E ++ ++ G PDC
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
+ ++G + EA V+ MKE +PD YN +IF +E Y
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 218 MLSNDCEPNLDTYTRIITALLRR 240
M+ EP+ TYT ++ + R+
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRK 348
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 41 LRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCE 100
L D+ G ++ + +D ++ V + +++F ++ G D A +VL+K LC+
Sbjct: 567 LDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCK 626
Query: 101 RSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
A +FN M K + VATYN++ GW K G + + M D PD T
Sbjct: 627 ACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVIT 686
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
+ + GL +GR EA + MK ++C P+ + A+I E + Y+ EM
Sbjct: 687 YTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREME 746
Query: 220 SNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+ EP+ Y ++++ L + +F EM+ G P
Sbjct: 747 EKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 139/355 (39%), Gaps = 3/355 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
A+ D S +++ L + + +L D+ NG+ +M + +++ + G ++
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN--VATYNAVAG 130
+++ G + + G+ LN + CL ER A + M+ F + +
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF-YGFEPWIKHTTFLVK 552
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
+ GR + + + ++ +G ++GL + +D E+F + P
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCP 612
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
D Y+ +I E +NEM+S +P + TY +I + ++ L
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
M P T T I LC+ G P A+ + + + C + + L+ L K
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
G G L + EM+E D VY ++S + + + E +HKG P
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 151/404 (37%), Gaps = 57/404 (14%)
Query: 42 RDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCER 101
RD+R+N +++ FV+ + KA Q+F + +GMN D +VL+ LC+
Sbjct: 277 RDIRLN-----YKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKH 331
Query: 102 SHVGAASSVFNSMK-----------GKVAFNVAT-----------------------YNA 127
+ A S++ +K GK+ + + Y +
Sbjct: 332 KDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKS 391
Query: 128 VAGGWSKFGRFNE----IERVMKEMEADGVA--------------PDCTTFGVFLEGLGR 169
+ G+ + +E I+ +M E+DGV+ PD + + + L +
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
A ++D A + + + P +YN +I +E +K EM EP+ T
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR 289
I L R V AL + +M +G P T +K LC G A
Sbjct: 512 LNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
G M A + L K L ++ ++ G+ DV Y +I LC +
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
A ++ E + KG P+ Y+ +I+ +R +++
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 12/278 (4%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC----TTFGVFLEGLGRAGRMDEA 176
++ YNA+A S+ R N +K + D + C FG F+ LG AG +DEA
Sbjct: 105 DMYAYNAMASILSR-ARQNA---SLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEA 160
Query: 177 FEVFCSMKERN-CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD--TYTRI 233
VF ++E C P+ YN ++ N + DC + D T T +
Sbjct: 161 SSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPV 220
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ K AL +F+E+L G L + T + C +G A + +
Sbjct: 221 LQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDI 279
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
++ + Y +L+ K + ++E+M+ G ++D+ +Y+ +I GLC LE A+
Sbjct: 280 RLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALS 339
Query: 354 VMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFL 391
+ E G P R + KL+ + + R ++ +
Sbjct: 340 LYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 174/424 (41%), Gaps = 43/424 (10%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FFNWA K D+ +Y + L R + L+ + V+ + + M F
Sbjct: 92 FFNWASKQEGYRNDMYAYNAMASILSRAR----QNASLKALVVDVLNSRCFMSPGAFGFF 147
Query: 64 VR----AGHVSKAIQVFGNLNELGMN-RDTEALNVLLKCLCE--RSHVGAASSVFNSMKG 116
+R AG V +A VF + E+G+ + N LL+ + + S V + M+
Sbjct: 148 IRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRD 207
Query: 117 -KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
F+ T V + G+ V E+ + G + + + + + G++D+
Sbjct: 208 CGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDK 266
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT 235
AFE+ ++ER+ + + Y +I F+ + D+ + + +M ++ Y +I
Sbjct: 267 AFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIG 326
Query: 236 ALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP-----FAALVIYKKARR 290
L + + + AL ++ E+ R G+ P G + K LCS+ ++I ++
Sbjct: 327 GLCKHKDLEMALSLYLEIKRSGIPPDRGILG---KLLCSFSEESELSRITEVIIGDIDKK 383
Query: 291 SGCTISMEAYKIL---LMRLSKLGKCGTLL-NIWEEMQEGGYSS--------------DV 332
S M YK L +R + + + + N+ + G S D
Sbjct: 384 S----VMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 333 EVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
+ +I+ L +++ AV ++ + + G P ++Y+ +I + +E + KL +
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 393 IKHA 396
+K A
Sbjct: 500 MKDA 503
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 127/310 (40%), Gaps = 2/310 (0%)
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNA 127
VS+ +++ + N+ + D+++L++++ CL + + V A ++ + + + + YN
Sbjct: 421 VSEIVKLLKDHNK-AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNN 479
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ G K GR E +++ EM+ GV P T L A ++ M+
Sbjct: 480 IIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYG 539
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
+P ++ + KY +++ ++ T I L++ V L
Sbjct: 540 FEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGL 599
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
++F ++ +G P IK LC A +++ + G ++ Y ++
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
K G+ L+ M E + DV Y +I GLC G+ A+ E K P+R
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 368 LVYSKLINKL 377
+ + LI L
Sbjct: 720 ITFMALIQGL 729
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 175/387 (45%), Gaps = 30/387 (7%)
Query: 16 EDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQV 75
+++ ++ +V R K S + ++M E +++ + ++D + ++G + KA+++
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKF 135
F + E R+ + N ++K L +R + A ++F M + +V ++ A+ G +K
Sbjct: 163 FDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFERMPRR---DVVSWTAMVDGLAKN 215
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
G+ +E R+ M + ++ + G + R+DEA ++F M ER D A +
Sbjct: 216 GKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPER----DFASW 267
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N MI FI + ++ ++ M E N+ ++T +IT + ++ +AL +F +MLR
Sbjct: 268 NTMITGFIRNREMNKACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL-GKCG 314
G + P I CS A LV ++ + + +I+ L + K G
Sbjct: 324 DGSVKPNVGTYVSILSACS---DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 315 TLLNIWEEMQEGGY--SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
L+ +M + G D+ + +I+ + G + A+ + + GF PS + Y
Sbjct: 381 ELIAA-RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLN 439
Query: 373 LINKLLDSNNAERAYKLFLKIKHARSL 399
L+ + E+ + F + SL
Sbjct: 440 LLFACSHAGLVEKGMEFFKDLVRDESL 466
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
++ + G +++A ++F L E RD ++ + + A +F+ + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPE----RDVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
NV T+ A+ G+ + + + E + +EM V ++ ++G ++GR+D+A E
Sbjct: 108 --NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALE 161
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
+F M ERN +N+M+ + DE M + M D + ++T ++ L
Sbjct: 162 LFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRD----VVSWTAMVDGLA 213
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKH 271
+ KV +A ++FD M ++ IT + ++
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQN 246
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 140/331 (42%), Gaps = 5/331 (1%)
Query: 56 LSIVVDSFVRAGHVSKAIQVFGNLNELGMNRD--TEALNVLLKCLCERSHVGAASSVFNS 113
+SI++ + G + ++ F + + + + N+LL+ C + A S+F
Sbjct: 142 MSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEK 201
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
+ + +V T N + G+ + G E EM G P+ T+G+ ++G +
Sbjct: 202 LHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNF 261
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
EA +F M + + +I + + + ++E+ P+ Y +
Sbjct: 262 GEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNAL 321
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTI-TCFIKHLCSYGPPFAALVIYKKARRSG 292
+++L++ V A+++ EM G+ P + T + FI + S F + Y + +
Sbjct: 322 MSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKER 381
Query: 293 CTISMEAYKILLMRL-SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
+ ++LM+L G+ L++W+ M E GY E + + LC + +A
Sbjct: 382 SLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDA 441
Query: 352 VLVMEEALHKGFCPSRLVYSKLINKLLDSNN 382
+ + +G C S VY +++ L SNN
Sbjct: 442 FECSWQTVERGRCVSEPVY-RMLETSLSSNN 471
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 37/396 (9%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
TFFNW P + Y V +K+L + F + + +M +GVE D + S ++
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV 122
R +KAI+ F + + G+ D
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDE---------------------------------- 256
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY+A+ +SK G+ E+ + + A G PD F V + G AG D V
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE 316
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
MK + +P+ VYN ++ +NEML PN T T ++ + R
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCS-YGPPFAALVIYKKARRS-GCTISMEAY 300
DALQ+++EM + P + + ++C+ G A ++ + S C +Y
Sbjct: 377 ARDALQLWEEM-KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSY 435
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
+L GK + ++EEM + G +V ++ L ++++ V V + ++
Sbjct: 436 TAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIK 495
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHA 396
+G P + L++ + ++E A K+ ++ A
Sbjct: 496 RGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERA 531
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 165/398 (41%), Gaps = 22/398 (5%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGV-EADLLMLSIVV 60
++FF+W+ L I SY + + L + + ++ +N ++DL V
Sbjct: 97 LSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDL------V 150
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVA 119
DS + +S + + ++L++C + ++ VF +
Sbjct: 151 DSLLDTYEISSSTPL--------------VFDLLVQCYAKIRYLELGFDVFKRLCDCGFT 196
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+V T N + SK + + R+ + + P+ T + ++ L + GR+ E ++
Sbjct: 197 LSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDL 256
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+ + C P V +++F + +E M +L + + Y+ ++ A +
Sbjct: 257 LDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAK 316
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
+V A ++FDEML+ G + T F++ C G A + + SG + E
Sbjct: 317 EGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDET 376
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
+ L+ ++ G L E M G + ++ + I + A ++ +++
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
KGF P YS LI ++ N+ ++A KLF ++++ +
Sbjct: 437 DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRK 474
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
M +L+ + + + D + SIVV + + G + A +VF + + G + ++ V ++
Sbjct: 289 MSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRV 348
Query: 98 LCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
CE+ V A + + M+ V+ T+N + GG+++FG + + M G+ P
Sbjct: 349 CCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPS 408
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
C+ F ++ + + ++ A E+ ++ PD Y+ +I FI ND D+ +K +
Sbjct: 409 CSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFY 468
Query: 217 EM---------------LSNDC--------------------EPNLDTYTRIITALLRRR 241
EM + C EPN D Y +I A +
Sbjct: 469 EMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIG 528
Query: 242 KVVDALQMFDEML 254
+A ++++EM+
Sbjct: 529 DKTNADRVYNEMI 541
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 15/277 (5%)
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIE 142
G + D +N +L C+ HVG A +F+ M+ + ++ ++N + G++ G +EI
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR---DMVSWNTMISGYASVGNMSEIL 230
Query: 143 RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNF 202
+++ M DG+ PD TFG L G ++ + C + + D + A+I +
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY 290
Query: 203 ISVNDFDECMKYYNEMLSNDCEPNLDT--YTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+ +C K + PN D +T +I+ L+R + AL +F EML+ G
Sbjct: 291 L------KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
+ I + G ++ R G T+ A L+ +K G L I+
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
E M E D+ + IISG L A+L+ EE
Sbjct: 405 ERMNE----RDLVSWNAIISGYAQNVDLCKALLLFEE 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 118/305 (38%), Gaps = 36/305 (11%)
Query: 16 EDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQV 75
+D+ + V++ L R + V +M +G + ++ VV S + G V
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 76 FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKF 135
G + G DT ALN L+ + H+ + +F M + ++ ++NA+ G+++
Sbjct: 369 HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER---DLVSWNAIISGYAQN 425
Query: 136 GRFNEIERVMKEMEADGVAP-DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAV 194
+ + +EM+ V D T L+ AG + + C + +P + V
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Query: 195 YNAMI---------------FNFISVNDF----------------DECMKYYNEMLSNDC 223
A++ F+ IS D D ++ Y+E L +
Sbjct: 486 DTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM 545
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRH-GVLPPTGTITCFIKHLCSYGPPFAAL 282
EPN + ++++ V L++F M+R GV P + C + LC A
Sbjct: 546 EPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAF 605
Query: 283 VIYKK 287
YK+
Sbjct: 606 KFYKE 610
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 150/395 (37%), Gaps = 82/395 (20%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+ + L I ++R++VK L M + DM V G D ++ S ++ V+
Sbjct: 192 IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD 251
Query: 69 VSKAIQVFGNLNE-----------------------------------LGMNRDTE---- 89
++++ L E +G N
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 90 ALNVLLKCLCERSHVGAASSVFNSMKGK------VAFNVATYNAVAGGWSKFGRFNEIER 143
A N +L+ L E A +F+++K + +A N+ T+N + G+ G+F E
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 144 VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
V ++M +PD +F + L + EA +++ M+E+N +PD Y ++
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
DE YY M+ ++ PNL Y R+ L++ K+ DA FD M+
Sbjct: 432 KEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV--------- 482
Query: 264 TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM 323
S + EAYK ++ LS+ G+ +L I +EM
Sbjct: 483 ---------------------------SKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Query: 324 -QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+ E+ E++ L G+ + +MEE
Sbjct: 516 LDDDTVRVSEELQEFVKEELRKGGREGDLEKLMEE 550
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 3/179 (1%)
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
I I ND +E Y + ++C P + T ++ A LR+ K LQ+ + + G+
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI 161
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKK-ARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
P T + P AL YK + S+ ++IL+ L +
Sbjct: 162 APNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAM 221
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK--GFCPSRLVYSKLI 374
I E+M G+ D VY Y++ G + + + +E K GF +VY +L+
Sbjct: 222 EIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLM 280
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+ +D S+ ++K L + + R+M+V G++ D V+ + G +++
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
Q+ + + L+ C+ + A +VF+ MK K NV ++ A+ G+
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK---NVVSWTAMVVGY 346
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+ GR E ++ +M+ G+ PD T G + ++E +
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
V N+++ + D D+ + +NEM D ++T +++A + + V+ +Q+FD+
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV----SWTAMVSAYAQFGRAVETIQLFDK 462
Query: 253 MLRHGVLPPTGTITCFI 269
M++HG+ P T+T I
Sbjct: 463 MVQHGLKPDGVTLTGVI 479
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/382 (18%), Positives = 139/382 (36%), Gaps = 46/382 (12%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
++RD N L+ + + S GHVS Q+ G + +LG + LL
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSS---NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
+ A VF + + N YN++ GG G + ++ + ME D V +
Sbjct: 186 NVGCISDAKKVFYGLDDR---NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-----S 237
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM---------------IFNFIS 204
+ ++GL + G EA E F MK + + D + ++ I I
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 205 VNDFDE----------------CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQ 248
+F + C+ Y + + N+ ++T ++ + + +A++
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 249 MFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLS 308
+F +M R G+ P T+ I + + KA SG + L+
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 309 KLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRL 368
K G ++ EM D + ++S G+ + + ++ + G P +
Sbjct: 418 KCGDIDDSTRLFNEMN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 369 VYSKLINKLLDSNNAERAYKLF 390
+ +I+ + E+ + F
Sbjct: 474 TLTGVISACSRAGLVEKGQRYF 495
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 159/387 (41%), Gaps = 46/387 (11%)
Query: 47 NGVEAD-LLMLSIVVDSFVRAGHVS--KAIQVFGNLNELGMNRDTEAL------------ 91
NG D L+M +V+ V H + + V G+L +L M R+ L
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 92 -----NVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMK 146
N+ LKC + A VF+ M+ + +V T+ + G+++ G + +
Sbjct: 256 KNALVNMYLKC----GRMDEARFVFDRMERR---DVITWTCMINGYTEDGDVENALELCR 308
Query: 147 EMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVN 206
M+ +GV P+ T + G A ++++ + + D + ++I +
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 207 DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTIT 266
D C + ++ P ++ II ++ V DAL +F M R V P T+
Sbjct: 369 RVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 267 CFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL----GKCGTLLN---I 319
+ P +AAL ++A C ++ + L + L KCGTL + I
Sbjct: 425 SLL-------PAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
+ +QE S DV ++ +ISG G NA+ V E + G P+ + ++ +N
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 380 SNNAERAYKLF-LKIKHARSLENARNY 405
S E LF ++H ++L + +Y
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHY 564
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 40/218 (18%)
Query: 19 GSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGN 78
G + I+ + + S +G+ + MR VE ++ L+ ++ ++ + +A+ +
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 79 LNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGR 137
L + G +A L+ + + +A +FN ++ K + +V + A+ G+ G
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 138 FNEIERVMKEMEADGVAPDCTTF----------GVFLEGL-------------------- 167
+ +V EM GV P+ TF G+ EGL
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 168 ------GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
GRAGR+DEA+ + ++ +P + V+ A++
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIP---FEPTSTVWGALL 600
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 163/437 (37%), Gaps = 102/437 (23%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
SY ++ A+ +K + + ++ ++ +G + D + + V+++F +G++ A+Q +
Sbjct: 82 SYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK----VAFNVATYNAVAGGWSKF 135
ELG+N T N L+K +S + + M + V N+ T+N + W K
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 136 GRFNEIERVMKEMEADGVAPDCTTF----------------------------------- 160
+ E V+K+ME GV PD T+
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 161 --GVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD--------- 209
G+ + G R GR+ + MKE + + V+N++I F+ V D D
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTL 321
Query: 210 --------------ECMKYYNEMLSNDCEPNLD--TYTRIITALLRRRKVVDALQMFDEM 253
+ MK L +C D TY+ ++ A + A Q+F EM
Sbjct: 322 LLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
++ GV P + K P KKA T+ +E+
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEP-------KKAEELLETLIVES-------------- 420
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
+V ++ +ISG C+ G +++A+ V + G P+ + L
Sbjct: 421 ---------------RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 465
Query: 374 INKLLDSNNAERAYKLF 390
+ L+ +A ++
Sbjct: 466 MWGYLEVKQPWKAEEVL 482
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 141/371 (38%), Gaps = 66/371 (17%)
Query: 86 RDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERV 144
R + L+ L ER A +VF ++ + ++ +Y + + ++ I +
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFIS 204
+ E+E G D F + +G M++A + MKE P T+ YN +I +
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 205 VNDFDECMKYYNEMLSN---DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
+ + + ML D PN+ T+ ++ A +++KV +A ++ +M GV P
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 262 TGT----ITCFIKH---LCSYGPPFAALVIYKKARRSG--CTISMEAY------------ 300
T T TC+++ + + +V+ +KA+ +G C I + Y
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 301 -------------------------------------KILLMRLSK----LGKCGTLLNI 319
+LLM ++ +G + +
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQV 342
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLD 379
M+E +DV Y +++ + G +E A V +E + G P YS L +
Sbjct: 343 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 402
Query: 380 SNNAERAYKLF 390
+ ++A +L
Sbjct: 403 AKEPKKAEELL 413
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 14/226 (6%)
Query: 41 LRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEAL-NVLLKCLC 99
+R M+ VEA+L++ + +++ FV +V L + N + E + N +K
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKV-- 340
Query: 100 ERSHVGAASSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
V MK V +V TY+ V WS G + +V KEM GV PD
Sbjct: 341 ---------QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 391
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
+ + +G RA +A E+ ++ + +P+ ++ +I + S D+ M+ +N+M
Sbjct: 392 AYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKM 450
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
PN+ T+ ++ L ++ A ++ M GV P T
Sbjct: 451 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 496
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
VL M+ V+AD++ S V++++ AG++ KA QVF + + G+ D A ++L K
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
A + ++ + NV + V GW G ++ RV +M GV+P+ T
Sbjct: 402 RAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKT 461
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
F + G + +A EV M+ +P+ + + + + DE K N +
Sbjct: 462 FETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Query: 220 SNDCE 224
D E
Sbjct: 522 CKDIE 526
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 135/363 (37%), Gaps = 69/363 (19%)
Query: 9 VKHPALPEDIGSYRVIVKA---LGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVR 65
+K L +Y ++K G+ + S ++ ++ + V ++ +++V ++ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 66 AGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH-VGAASSVFNSM--KGKVAFNV 122
V +A +V + E G+ DT N + C ++ V A S V M K K N
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 123 ATYNAVAGGWSKFGRFNE---IERVMKE--------------------MEADG------- 152
T V GG+ + GR + R MKE M+ DG
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLT 320
Query: 153 ------------------------------VAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
V D T+ + AG M++A +VF
Sbjct: 321 LLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 380
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
M + +PD Y+ + ++ + + + E L + PN+ +T +I+
Sbjct: 381 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVESRPNVVIFTTVISGWCSNGS 439
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ DA+++F++M + GV P T + P+ A + + R GC + E
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR--GCGVKPENSTF 497
Query: 303 LLM 305
LL+
Sbjct: 498 LLL 500
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 140/329 (42%), Gaps = 6/329 (1%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F W K D G Y ++ +G++ M + +M+ +G D + + ++ + +
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 65 RAGHVSKAIQ-VFGNLNEL-GMNR---DTEALNVLLKCLCERSHVGAASSVFNSMK-GKV 118
+KA++ V G L+++ G+ R + N+LL+ + V +++F + V
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
+ +V T+N V + K G E+E V+ M ++ PD TF V ++ G+ ++ +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
F S+ +P +N+MI N+ D+ + +M + P+ TY +I
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
V A ++F+E+ + T+ ++ C G A ++ A
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
YK L +K + + ++M++ G
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 124/309 (40%), Gaps = 6/309 (1%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC-LCERSHVGAASSV---FNSMKG--KV 118
+ G A+ +F + G D N L+ L R A V + MKG +
Sbjct: 145 KKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC 204
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
NV TYN + +++ G+ +++ + K+++ V+PD TF ++ G+ G + E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
V M+ C+PD +N +I ++ +F++ + + ++ + +P L T+ +I
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
+ R + A +F +M +P T C I G A I+++ S +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
+L + G ++ D Y+++ E ++M++
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Query: 359 LHKGFCPSR 367
G P++
Sbjct: 445 EKDGIVPNK 453
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 97/244 (39%), Gaps = 5/244 (2%)
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND----FDE 210
PD + + +G+ G+ A +F MK C+PD +VYNA+I + D ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 211 CMKYYNEMLSND-CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
Y ++M + C+PN+ TY ++ A + KV +F ++ V P T +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
G + + R + C + + +L+ K + + ++ +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
+ + +I ++ A V ++ + PS + Y +I + RA ++
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 390 FLKI 393
F ++
Sbjct: 371 FEEV 374
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TYN++ G+ K R ++ +R++ M + G +PD TF + G +A R+D E+FC M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKV 243
R +T Y +I F V D D NEM+S P+ T+ ++ L ++++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 244 VDALQMFDEMLR 255
A + +++ +
Sbjct: 132 RKAFAILEDLQK 143
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%)
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+ P T+ ++G + R+D+A + SM + C PD ++ +I + D M
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 213 KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
+ + EM N TYT +I + + A + +EM+ GV P T C + L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 273 CSYGPPFAALVIYKKARRS 291
CS A I + ++S
Sbjct: 126 CSKKELRKAFAILEDLQKS 144
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 35/168 (20%)
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
P T YN+MI F + D+ + + M S C P++ T++ +I + ++V + +++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
F EM R G++ T T T I C G AA
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA---------------------------- 99
Query: 310 LGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
LLN EM G + D + +++GLC+ +L A ++E+
Sbjct: 100 ----QDLLN---EMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 140
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KG 116
++D F + V A ++ ++ G + D + L+ C+ V +F M +G
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 75
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
VA N TY + G+ + G + + ++ EM + GVAPD TF L GL + +A
Sbjct: 76 IVA-NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 134
Query: 177 FEVF 180
F +
Sbjct: 135 FAIL 138
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 140/329 (42%), Gaps = 6/329 (1%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F W K D G Y ++ +G++ M + +M+ +G D + + ++ + +
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 65 RAGHVSKAIQ-VFGNLNEL-GMNR---DTEALNVLLKCLCERSHVGAASSVFNSMK-GKV 118
+KA++ V G L+++ G+ R + N+LL+ + V +++F + V
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
+ +V T+N V + K G E+E V+ M ++ PD TF V ++ G+ ++ +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
F S+ +P +N+MI N+ D+ + +M + P+ TY +I
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
V A ++F+E+ + T+ ++ C G A ++ A
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGG 327
YK L +K + + ++M++ G
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 125/312 (40%), Gaps = 6/312 (1%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC-LCERSHVGAASSV---FNSMKG--KV 118
+ G A+ +F + G D N L+ L R A V + MKG +
Sbjct: 145 KKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERC 204
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
NV TYN + +++ G+ +++ + K+++ V+PD TF ++ G+ G + E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
V M+ C+PD +N +I ++ +F++ + + ++ + +P L T+ +I
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
+ R + A +F +M +P T C I G A I+++ S +
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKAS 384
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
+L + G ++ D Y+++ E ++M++
Sbjct: 385 TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKM 444
Query: 359 LHKGFCPSRLVY 370
G P++ +
Sbjct: 445 EKDGIVPNKRFF 456
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 96/244 (39%), Gaps = 5/244 (2%)
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVND----FDE 210
PD + + +G+ G+ A +F MK C+PD +VYNA+I + D ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 211 CMKYYNEMLS-NDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
Y ++M C+PN+ TY ++ A + KV +F ++ V P T +
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
G + + R + C + + +L+ K + + ++ +
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
+ + +I ++ A V ++ + PS + Y +I + RA ++
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 390 FLKI 393
F ++
Sbjct: 371 FEEV 374
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 35 SFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVL 94
+++ +L+++ + + L++++ ++ +F + K + + + E D N +
Sbjct: 159 TYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSV 218
Query: 95 LKCLCERSHVGAASSVFNSMKG--KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG 152
L L V V ++MK V+ N+ TYN V G K RF+ + EM G
Sbjct: 219 LDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCG 278
Query: 153 VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECM 212
+ PD ++ ++ LGR+G + E+ +F MK+R +P VY A+I DF +
Sbjct: 279 IEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSAL 338
Query: 213 KYYNEM 218
+ +E+
Sbjct: 339 QLSDEL 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Query: 115 KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMD 174
+ + + + N + +++ + +++ ++KEM+ PD T+ L+ LGRAG ++
Sbjct: 170 ESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVN 229
Query: 175 EAFEVFCSMKERNCQPDTAV--YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
E V +MKE +C + YN ++ FD C+ YNEM+ EP+L +YT
Sbjct: 230 EILGVLSTMKE-DCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTA 288
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL 282
+I +L R V ++L++FDEM + + P I L G +AL
Sbjct: 289 VIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSAL 338
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 3/216 (1%)
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAF 120
+F+ + + ++E + +N ++ E + + MK +
Sbjct: 151 AFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKP 210
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEAD-GVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
+V TYN+V + G NEI V+ M+ D V+ + T+ L G+ +A R D +
Sbjct: 211 DVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVI 270
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+ M + +PD Y A+I + + E ++ ++EM P++ Y +I L +
Sbjct: 271 YNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKK 330
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY 275
ALQ+ DE+ L G F +HL S+
Sbjct: 331 SGDFQSALQLSDELKNTSSLDLAGPQD-FKRHLRSH 365
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 111/271 (40%), Gaps = 6/271 (2%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS---MK 115
+V+ F R G++S A + +L E + LL E + + + VF +
Sbjct: 76 LVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILP 135
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
GK + Y +A + + ++KE+ + + ++D+
Sbjct: 136 GKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDK 195
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP--NLDTYTRI 233
+ MKE C+PD YN+++ +E + + M DC N+ TY +
Sbjct: 196 VLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTM-KEDCSVSVNIITYNTV 254
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC 293
+ + + + L +++EM++ G+ P + T I L G +L ++ + ++
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQ 324
S+ Y+ L+ L K G + L + +E++
Sbjct: 315 RPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 146/365 (40%), Gaps = 43/365 (11%)
Query: 40 VLRDMRVNGV--------EADLL-MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEA 90
+LRD R+ + DLL M I SF +A +A++ +L +N
Sbjct: 410 LLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMST 469
Query: 91 LNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
N+L+ + A V ++ + + Y + +K G+ + + V +M
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMS 529
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
GV + TFG ++G RAG++ +AF + ++ +N +PD V+NA+I D
Sbjct: 530 NSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVD 589
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
EM + H + P +I +
Sbjct: 590 RAFDVLAEMKAE---------------------------------THPIDPDHISIGALM 616
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
K C+ G A +Y+ + G + E Y I + SK G +I+++M+E +
Sbjct: 617 KACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVT 676
Query: 330 SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
D + +I + L+ A ++++A +G + YS L+ ++ + ++A +L
Sbjct: 677 PDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALEL 736
Query: 390 FLKIK 394
+ KIK
Sbjct: 737 YEKIK 741
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 110/294 (37%), Gaps = 38/294 (12%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
V+ + D Y ++ + + M V M +GVEA+L ++D RAG
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK----------- 117
V+KA +G L + D N L+ + V A V MK +
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 118 ---------------------------VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA 150
+ Y SK G ++ + K+M+
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKE 672
Query: 151 DGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDE 210
V PD F ++ G A +DEAF + K + + T Y++++ + D+ +
Sbjct: 673 KDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKK 732
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
++ Y ++ S P + T +ITAL ++ A++ DE+ G+ P T T
Sbjct: 733 ALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTIT 786
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 141/359 (39%), Gaps = 38/359 (10%)
Query: 39 GVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
GVLR ++ +G+ AD + + ++ S ++G V +VF ++ G+ + L+
Sbjct: 488 GVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGC 547
Query: 99 CERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADG--VAP 155
V A + ++ K V + +NA+ + G + V+ EM+A+ + P
Sbjct: 548 ARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDP 607
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
D + G ++ AG+++ A EV+ + + + VY + + D+D Y
Sbjct: 608 DHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIY 667
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY 275
+M D P+ ++ +I V +M DE
Sbjct: 668 KDMKEKDVTPDEVFFSALI-------DVAGHAKMLDE----------------------- 697
Query: 276 GPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVY 335
A I + A+ G + +Y L+ L ++E+++ +
Sbjct: 698 -----AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 336 EYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
+I+ LC QL A+ ++E G P+ + YS L+ ++ E ++KL + K
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAK 811
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 14/295 (4%)
Query: 1 MVTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVL------RDMRVNGVEADLL 54
+V F A + +I Y V+ L K ++ +L RDM G A ++
Sbjct: 57 IVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARII 116
Query: 55 MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM 114
L + +AG A +VF + R + N LL +FN +
Sbjct: 117 SL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL 170
Query: 115 KGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGR 172
GK++ ++ +YN + + E ++ E+E G+ PD TF L G+
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 173 MDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTR 232
+ E++ M E+N D YNA + + E + + E+ ++ +P++ ++
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKK 287
+I + K+ +A + E+++HG P T + +C G +A+ ++K+
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 130/326 (39%), Gaps = 60/326 (18%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKE------MEADGVAPDCTTFGVFLEGLGRAGRMD 174
N+A Y+ R + +E +++E M +G A + G+AG +
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISL------YGKAGMFE 126
Query: 175 EAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN-DCEPNLDTYTRI 233
A +VF M R+C+ +NA++ + FD + +NE+ +P++ +Y +
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY--GPPFAALVIYKKARRS 291
I AL + + +A+ + DE+ G+ P T + L SY G I+ K
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL--LSSYLKGQFELGEEIWAKMVEK 244
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQ--------------------EG----- 326
I + Y L+ L+ K L+N++ E++ EG
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
Query: 327 ----------GYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
GY D + ++ +C G E+A+ + +E K + + +L+++
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 377 LLDSNNAERAYKL--------FLKIK 394
L+ + E A ++ FLK+K
Sbjct: 365 LVKGSKREEAEEIVKIAKTNDFLKLK 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
++ D++ + ++ + + +A+ + + G+ D N LL +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 108 SSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
++ M K VA ++ TYNA G + + E+ + E++A G+ PD +F + G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
G+MDEA + + + +PD A + ++ DF+ ++ + E S
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 227 LDTYTRIITALLRRRKVVDALQM 249
T +++ L++ K +A ++
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEI 377
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 18/291 (6%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDM--RVNGVEA-DLLMLSIVV 60
FF W H + + R + L + F + LR + R NG ++ ++
Sbjct: 113 FFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLM 172
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK---GK 117
G V +A+ F + E D A N ++ LC + A + + M+ +
Sbjct: 173 KCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFR 232
Query: 118 VAFNVATYNAVAGGWSKFG-----------RFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ TY + + ++G R E R+ +EM G PD T+ ++G
Sbjct: 233 YPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDG 292
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS-NDCEP 225
+ R+ A E+F MK + C P+ YN+ I + N+ + ++ M P
Sbjct: 293 CCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVP 352
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
TYT +I AL+ R+ +A + EM+ G++P T L S G
Sbjct: 353 GSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 15/232 (6%)
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
++ LG G + EA F MKE +C+PD YN +I V +F + ++M
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 223 CE--PNLDTYTRIITALLR-----------RRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
P+ TYT +I++ R RR++ +A +MF EML G +P T C I
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYS 329
C AL +++ + GC + Y + S + + + M++ G+
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 330 -SDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
Y +I L + A ++ E + G P Y KL+ L S
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY-KLVCDALSS 401
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 262 TGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWE 321
T +ITC +K L G AL + + + C + AY ++ L ++G + +
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 322 EMQEGG--YSSDVEVYEYIISGLCNIG-----------QLENAVLVMEEALHKGFCPSRL 368
+MQ G Y D Y +IS C G ++ A + E L +GF P +
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 369 VYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
Y+ LI+ +N RA +LF +K + N Y
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 18/333 (5%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLR-------DMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
++ V+ L +K FS + +L D++ A ++L + +A + +
Sbjct: 82 AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL------YAQANMLDHS 135
Query: 73 IQVFGNLNELGMNRDTEALNVLL-KCLCERSHVGAASSVFNSMKGK--VAFNVATYNAVA 129
++VF +L + ++R ++LN LL CL + + A V+ M + ++ TYN +
Sbjct: 136 LRVFRDLEKFEISRTVKSLNALLFACLVAKDY-KEAKRVYIEMPKMYGIEPDLETYNRMI 194
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
+ + G + ++ EME G+ P+ ++FG+ + G + DE +V MK+R
Sbjct: 195 KVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVN 254
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
+ YN I + E + MLS +PN TY+ +I +A ++
Sbjct: 255 IGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKL 314
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
F M+ G P + I +LC G AL + K++ S K L+ L+K
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAK 374
Query: 310 LGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGL 342
K + +++E ++ +VE++ + + L
Sbjct: 375 DSKVEEAKELIGQVKE-KFTRNVELWNEVEAAL 406
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 36/224 (16%)
Query: 168 GRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS-NDCEPN 226
+A +D + VF +++ NA++F + D+ E + Y EM EP+
Sbjct: 127 AQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPD 186
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
L+TY R+I + + EM R G+ P + S+G +
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSS----------SFGLMISGFYAED 236
Query: 287 KARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
K+ G ++M M++ G + V Y I LC
Sbjct: 237 KSDEVGKVLAM-------------------------MKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 347 QLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
+ + A +++ L G P+ + YS LI+ + ++ E A KLF
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLF 315
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 154/375 (41%), Gaps = 27/375 (7%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K + D+ +Y ++ + + ++ +M NG+ DL+ +++V R GH
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATY--N 126
+ ++++ + G + +V+++ LC V A F+S++ K N A++
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG 533
Query: 127 AVAGGWSK--FGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMK 184
G SK + F +E +++ + + L G +++A +V M
Sbjct: 534 YCEAGLSKKAYKAFVRLEYPLRK----------SVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 185 ERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVV 244
+P ++ MI F +N+ E ++ M+ P+L TYT +I R ++
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 245 DALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF-------------AALVIYKKARRS 291
A +F++M + G+ P T T + P A + ++ +
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAA 703
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G + + Y +L+ R K+ +++ M + G D+ Y +IS G ++ A
Sbjct: 704 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Query: 352 VLVMEEALHKGFCPS 366
V ++ E K PS
Sbjct: 764 VTLVTELSKKYNIPS 778
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 144/370 (38%), Gaps = 23/370 (6%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y V AL + +L++M+ G+ D++ + ++D + G V A+ + +
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 81 ELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFN 139
GM+ D NVL+ L H ++ MK + N T + + G +
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP-DTAVYNAM 198
E E +E P+ F++G AG +A++ F ++ P +VY +
Sbjct: 511 EAEDFFSSLEQK--CPE--NKASFVKGYCEAGLSKKAYKAFVRLE----YPLRKSVYIKL 562
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
F+ ++ +M + EP ++I A + V +A +FD M+ G+
Sbjct: 563 FFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL-------- 310
+P T T I C A +++ ++ G + Y +LL R KL
Sbjct: 623 IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETC 682
Query: 311 ---GKCG--TLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
G+ G + E G DV Y +I C + LE A + + + G P
Sbjct: 683 SVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 366 SRLVYSKLIN 375
+ Y+ LI+
Sbjct: 743 DMVAYTTLIS 752
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 139/370 (37%), Gaps = 29/370 (7%)
Query: 55 MLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM 114
+L +VV F + A V + E+G D A ++ C+ ++ A + M
Sbjct: 285 VLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKM 344
Query: 115 KGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
GK + N + + + K E KE + D + V + L + GR+
Sbjct: 345 LGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRV 404
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
+EAFE+ MK+R PD Y +I + + + +EM+ N P+L TY +
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC-------------------- 273
++ L R + L++++ M G P T + I+ LC
Sbjct: 465 VSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Query: 274 ----SYGPPFAALVIYKKARRSGCTISM----EAYKILLMRLSKLGKCGTLLNIWEEMQE 325
S+ + + KKA ++ + Y L L G ++ ++M
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 326 GGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAER 385
+ +I C + + A ++ + + +G P Y+ +I+ N ++
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 386 AYKLFLKIKH 395
A LF +K
Sbjct: 645 AESLFEDMKQ 654
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 142/352 (40%), Gaps = 18/352 (5%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-K 117
+V ++V G +A V L D +A N L+ + E +G ++F +K
Sbjct: 152 LVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLG 211
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG--VFLEGLGRAGRMDE 175
+ N TY V + G E ++ E E + FG F+ GL G ++
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLLIENE--------SVFGYKTFINGLCVTGETEK 263
Query: 176 AFEVFCSMKERNCQPDT---AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT- 231
A + + +R AV ++ F + EM + LD Y
Sbjct: 264 AVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEM--EEIGFGLDVYAC 321
Query: 232 -RIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
+I + + +AL D+ML G+ ++ ++ C AL +K+ R
Sbjct: 322 LAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRD 381
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
+ Y + LSKLG+ + +EM++ G DV Y +I G C G++ +
Sbjct: 382 MNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD 441
Query: 351 AVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENA 402
A+ +++E + G P + Y+ L++ L + + E +++ ++K NA
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNA 493
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 167/421 (39%), Gaps = 56/421 (13%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVS 70
+P + +D+G+ V V++L L ++ + L++V + +
Sbjct: 447 NPPVIDDLGNIEVKVESL------------LGEIARKDANLAAVGLAVVTTALCSQRNYI 494
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF--NVATYNAV 128
A+ + LG + N ++KCL + + + +S+ N ++ ++ F +V TY V
Sbjct: 495 AALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ-ELDFVPDVDTYLIV 553
Query: 129 AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNC 188
K + ++ ME G+ P + + LG+ GR+ EA E F M E
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Query: 189 QPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQ 248
QPD Y MI + DE + E++ + P+ TYT +I+ ++ + Q
Sbjct: 614 QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQ 673
Query: 249 MFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY----------------------- 285
D+ML G+ P T I H G + ++
Sbjct: 674 YLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLW 733
Query: 286 -KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSS-------------- 330
AR+ + +E K L L +L + L++I + G S
Sbjct: 734 RAMARKKKRQVIVEPGKEKL--LQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSII 791
Query: 331 -DVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKL 389
++ ++ II+G C G+L+ A +E +G P+ + Y+ L+ +++ + E A L
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 390 F 390
F
Sbjct: 852 F 852
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 107 ASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
A V +K + N+ +N + G+ GR +E ++ M+ +G+ P+ T+ + ++
Sbjct: 779 AMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
AG ++ A ++F + NC+PD +Y+ ++ + + EM + PN
Sbjct: 839 HIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPN 895
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLC 273
D+Y +++ L R ++A+++ +M + P + T I LC
Sbjct: 896 KDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILC 942
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 133/355 (37%), Gaps = 16/355 (4%)
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS-MKGKVAFN 121
F + G + KA+ + + + G+ D VLLK L + + A + S + N
Sbjct: 388 FYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGIN 447
Query: 122 VATYNAVAGGWSKF-GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ + K EI R + A G+A T + R+++
Sbjct: 448 PPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEK----- 502
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M C P YN++I N ++ N + D P++DTY ++ L ++
Sbjct: 503 --MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKK 560
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
A + D M G+ P + I L G A + K SG AY
Sbjct: 561 NDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAY 620
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
I++ ++ G+ + EE+ + Y +ISG +G +E +++ L
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLF-------LKIKHARSLENARNYWRS 408
G P+ ++Y+ LI L + + ++ LF +K H + WR+
Sbjct: 681 DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 144/396 (36%), Gaps = 71/396 (17%)
Query: 67 GHVSKAIQVFGNLNELGMNRDTEALNV---LLKCLCERSHVGAASSVFNSMKGKVAF-NV 122
GH+++AI + L GM R +N+ L C C+R A ++F+ M+ + +
Sbjct: 215 GHLNEAIGMLDTL--CGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDK 272
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
Y + + K R+ M D F + G + G +D+ +F
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYY-NEMLSNDCEPNLDTYTRIITALLRRR 241
M ++ Q + Y+ MI ++ + D ++ + N S D N+ YT +I ++
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTI------ 295
+ A+ + ML +G++P T +K L A+VI + +GC I
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 296 ------------------------------------SMEAYKILLMRLSK---LG----- 311
S Y L R+ K LG
Sbjct: 453 DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 312 -------KCGTLLNIWEEM-------QEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
KC NI E++ QE + DV+ Y +++ LC + A +++
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
G P+ +YS +I L A + F K+
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 2/250 (0%)
Query: 3 TFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDS 62
TF+N V + D +V L + + F L + +G S+VVD
Sbjct: 116 TFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDE 175
Query: 63 FVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG--KVAF 120
+A F + E G L K LC H+ A + +++ G ++
Sbjct: 176 LCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPL 235
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
V Y ++ + K G E E + ME DG D + ++ + M A ++
Sbjct: 236 PVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLY 295
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M ER+ + D ++N +I F+ + D+ +++M+ + N+ TY +I + +
Sbjct: 296 LRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE 355
Query: 241 RKVVDALQMF 250
V AL++F
Sbjct: 356 GNVDYALRLF 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 165/403 (40%), Gaps = 17/403 (4%)
Query: 8 AVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
A++ L + Y I+ +LG++ M +G++ D + I+++++ R G
Sbjct: 572 AMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNG 631
Query: 68 HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYN 126
+ +A ++ + + + + VL+ + + + M + ++ NV Y
Sbjct: 632 RIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT 691
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM-KE 185
A+ G + K G F + M + + D + L GL RA + +V KE
Sbjct: 692 ALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 186 RNCQ------PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
+ Q P ++ +++ N+ S + E + + + PNL + IIT
Sbjct: 752 KLLQRLIRTKPLVSIPSSL-GNYGSKSFAMEVIGKVKKSII----PNLYLHNTIITGYCA 806
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEA 299
++ +A + M + G++P T T +K G +A+ +++ + C
Sbjct: 807 AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVM 863
Query: 300 YKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEAL 359
Y LL L + L + EMQ+ G + + + YE ++ LC AV V+++
Sbjct: 864 YSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMA 923
Query: 360 HKGFCPSRLVYSKLINKLLDSNNAERAYKLF-LKIKHARSLEN 401
P + ++ LI L + A LF + ++ RSL N
Sbjct: 924 ALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLN 966
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 3/273 (1%)
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNS--MKGKVAFNVATYNAVAGGWSKFGRFNE 140
G+ D+ L++ L E G A + +N + + + + +++ K RF+E
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 141 IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
+ + A G AP + + ++ L R EAF F +KER +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 201 NFISVNDFDECMKYYNEMLSNDCEP-NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
+E + + + P ++ Y + +R +A +FD M G
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
TC +K C A+ +Y + + + L+ KLG +
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVM 329
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAV 352
+ +M + G S+V Y +I C G ++ A+
Sbjct: 330 FSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 138/313 (44%), Gaps = 21/313 (6%)
Query: 75 VFGNLNE-LGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGW 132
V NL E + +R+ NV +K + + + +F+ M + + + AT+ +
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+ G ++M + G PD T ++ GRAG +D A ++ + + D
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
++ +I + ++D C+ Y EM + +PNL Y R+I ++ R ++ A ++ +
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 253 MLRHGVLPPTGTITCFIKHL--CSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
++ +G P T ++ YG AL IY++ + G ++++ Y LL +
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGD--DALAIYREMKEKGLSLTVILYNTLLSMCADN 398
Query: 311 GKCGTLLNIWEEMQ--------EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
I+++M+ +SS + V Y SG + + E A+L M EA G
Sbjct: 399 RYVDEAFEIFQDMKNCETCDPDSWTFSSLITV--YACSG--RVSEAEAALLQMREA---G 451
Query: 363 FCPSRLVYSKLIN 375
F P+ V + +I
Sbjct: 452 FEPTLFVLTSVIQ 464
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 6/229 (2%)
Query: 48 GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAA 107
G E D + ++ ++D++ RAG+V A+ ++ D + L++ +
Sbjct: 240 GCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGC 299
Query: 108 SSVFNSMKG-KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+++ MK V N+ YN + + R + + + K++ +G P+ +T+ +
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRA 359
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLS-NDCEP 225
GRA D+A ++ MKE+ +YN ++ DE + + +M + C+P
Sbjct: 360 YGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDP 419
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP----TGTITCFIK 270
+ T++ +IT +V +A +M G P T I C+ K
Sbjct: 420 DSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGK 468
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%)
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+YN + F D ++ K ++EML +P+ T+T II+ + A++ F++M
Sbjct: 177 LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
G P T+ I G AL +Y +AR I + L+ G
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
LNI+EEM+ G ++ +Y +I + + A ++ ++ + GF P+ Y+ L
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 374 INKLLDSNNAERAYKLFLKIKH 395
+ + + A ++ ++K
Sbjct: 357 VRAYGRARYGDDALAIYREMKE 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 101/255 (39%), Gaps = 37/255 (14%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D ++ +++ G + + + +M+ GV+ +L++ + ++DS RA +A ++
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKF 135
+L G + L++ + A +++ MK K ++ V YN +
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS----- 393
Query: 136 GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE-RNCQPDTAV 194
M AD +DEAFE+F MK C PD+
Sbjct: 394 ------------MCADN------------------RYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 195 YNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML 254
++++I + E +M EP L T +I + ++V D ++ FD++L
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 255 RHGVLPPTGTITCFI 269
G+ P C +
Sbjct: 484 ELGITPDDRFCGCLL 498
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
MR + ++ D +I++ +AG +A +F NL G+ D + N++++ S
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SS 60
Query: 104 VGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
+G A ++ M +G V + TYN++ G K + + +V K C+TF
Sbjct: 61 LGRAEKLYAEMIRRGLVP-DTITYNSMIHGLCKQNKLAQARKVSKS---------CSTFN 110
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
+ G +A R+ + +FC M R + Y +I F V DF+ + + EM+SN
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMF 250
+ T+ I+ L R+++ A+ M
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
+F M+E N DTA YN +I FDE + +L + +P++ TY +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
R + A +++ EM+R G++P T T I LC K A+ + S
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQN---------KLAQARKVSKSCS 107
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
+ L+ K + +N++ EM G ++V Y +I G +G A+ + +E
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 359 LHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLK 392
+ G S + + ++ +L +A + L+
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 143 RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNF 202
+VM+E D D + + + GL +AG+ DEA +F ++ QPD YN M
Sbjct: 3 KVMRESNMD---MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM---- 55
Query: 203 ISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPT 262
I + K Y EM+ P+ TY +I L ++ K+ A + V
Sbjct: 56 IRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSC 106
Query: 263 GTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEE 322
T I C + ++ + R G ++ Y L+ ++G T L+I++E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 323 MQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
M G S + I+ LC+ +L AV ++
Sbjct: 167 MVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 9/187 (4%)
Query: 15 PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQ 74
P++I + +V A + SF V + +G++ D L+ + ++D +++ G +KA +
Sbjct: 329 PDEI-TLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFK 387
Query: 75 VFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWS 133
+F NLN+ +DT + + ++ A+S+F +M + K+ NV T+ + +S
Sbjct: 388 MFSNLNK----KDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
Query: 134 KFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
G E + M+ + P +G+ ++ LGRAGR++EA+E+ SM QP+
Sbjct: 444 HSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP---MQPNAG 500
Query: 194 VYNAMIF 200
V+ A++
Sbjct: 501 VWGALLL 507
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 138/338 (40%), Gaps = 9/338 (2%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L DI ++ ++ + + VL+ M++ G++ +S ++ + GH+
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
+ G + + D L+ + ++ A VF+ M K N+ +N++ G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK---NIVAWNSLVSGL 301
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
S + E +M ME +G+ PD T+ G G+ ++A +V MKE+ P+
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 193 AVYNAMIFNFISVN-DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+ A IF+ S N +F +K + +M PN T + ++ L + ++
Sbjct: 362 VSWTA-IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
LR ++ T + G +A+ I+ + S+ ++ +LM + G
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFG 476
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
+ + + M E G D + ++S N G ++
Sbjct: 477 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQ 514
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 144/339 (42%), Gaps = 9/339 (2%)
Query: 40 VLRDMRVNGVEA-DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCL 98
+ R+M+ +G +A D M+ ++ + G ++ Q+ G + LG+ + N L+
Sbjct: 76 LFREMQFSGAKAYDSTMVKLLQVCSNKEG-FAEGRQIHGYVLRLGLESNVSMCNSLIVMY 134
Query: 99 CERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+ + VFNSMK + N++++N++ ++K G ++ ++ EME G+ PD
Sbjct: 135 SRNGKLELSRKVFNSMKDR---NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIV 191
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ L G G +A V M+ +P T+ ++++ + +
Sbjct: 192 TWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
L N ++ T +I ++ + A +FD M ++ ++ + + C
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG-LSYACLLKDA 310
Query: 279 FAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYI 338
A ++ + + G + L + LGK L++ +M+E G + +V + I
Sbjct: 311 EALMI---RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 339 ISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
SG G NA+ V + +G P+ S L+ L
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 41/231 (17%)
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEI 141
G+ D N L A V MK K VA NV ++ A+ G SK G F
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 142 ERVMKEMEADGVAPDCTTFGVFLEGLG--------------------------------- 168
+V +M+ +GV P+ T L+ LG
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 440
Query: 169 --RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
++G + A E+F +K ++ A +N M+ + +E + ++ ML EP+
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPD 496
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEML-RHGVLPPTGTITCFIKHLCSYG 276
T+T +++ V + + FD M R+G++P +C + L G
Sbjct: 497 AITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 24 IVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELG 83
++ A + + + + + + M G++ +L+ + +++S +AG V +V+ L LG
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 84 MNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK--VAFNVATYNAVAGGWSKFGRFNEI 141
D N LL L + + +F+ ++ + N YN K G + +
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 142 ERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFN 201
+++ EME G+ +++ + + ++ + A V+ M +R+C+P+T Y +++ +
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 202 FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
I + +DE E + EP++ Y I + RR+ A +++ +M G+ P
Sbjct: 470 CIWGSLWDEV-----EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Query: 262 TGTITCFIKHL 272
T +++L
Sbjct: 525 GKTRAMMLQNL 535
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 139/365 (38%), Gaps = 6/365 (1%)
Query: 43 DMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERS 102
MR G++ + + + +R G + KA VF + + N +++LK + E
Sbjct: 132 SMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRK-KENVTGHTYSLMLKAVAEVK 190
Query: 103 HVGAASSVFNSM----KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
+A +F + K + F+V YN + E ER+ + M+ DG
Sbjct: 191 GCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEI 250
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
T+ + + R GR + A +V+ M AMI +D +K + M
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP 278
L +PNL +I +L + KV +++ + G P T + L
Sbjct: 311 LKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 279 FAALVIYKKARRSG-CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
L ++ R C ++ Y ++ KLG + + EM+ G + Y
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+IS + + A+LV E + P+ Y L+ + + + + K++
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDV 490
Query: 398 SLENA 402
SL NA
Sbjct: 491 SLYNA 495
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 4/249 (1%)
Query: 106 AASSVFNSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVF 163
+A VF ++ ++ + NV Y + K + + + +EM +G + +
Sbjct: 132 SAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191
Query: 164 LEGLGRAGRMDEAFEVFCSMKE-RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
+ R+GR D AF + MK NCQPD Y+ +I +F+ V FD+ ++M
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEML-RHGVLPPTGTITCFIKHLCSYGPPFAA 281
PN TY +I A + + V+ +ML P + T+ ++ G
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
Y+K + SG ++ + ILL K G + + E MQ+ YS + Y +I
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371
Query: 342 LCNIGQLEN 350
G L+
Sbjct: 372 FGRAGDLKQ 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 114/297 (38%), Gaps = 44/297 (14%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV- 69
H P D+ +Y +++K+ + F + +L DMR G+ + + + ++D++ +A
Sbjct: 215 HNCQP-DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFV 273
Query: 70 ---SKAIQVFG--------------------------------NLNELGMNRDTEALNVL 94
S IQ+ G G+ + N+L
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 333
Query: 95 LKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
L + + S+V M K ++ + TYN V + + G ++E + + M+++ +
Sbjct: 334 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
P C T + GRA + D+ V ++ + + D +N ++ + + F E
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 214 YYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIK 270
M +P+ TY ++ A ++ E+ HGV+ G +K
Sbjct: 454 VLELMEKKGFKPDKITYRTMVKAY----RISGMTTHVKEL--HGVVESVGEAQVVVK 504
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 125/320 (39%), Gaps = 19/320 (5%)
Query: 58 IVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK 117
IV+ + A + K + F +N G + E +N ++ LC+ V A VF +K
Sbjct: 151 IVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF 210
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ + TY + G+ G E ++ M +G D +E L + + DEA
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 178 EVFCSM-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
+VF M +R D Y MI D K ++EM + T+ +I
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTI-TCFIKHLCSYGPPFAALVIYKKARRSGCTI 295
LL +R+VV+A + + GV P +I IK L A +++K + GC
Sbjct: 331 LLVKRRVVEAYGLVE-----GVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEP 385
Query: 296 SMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVM 355
M Y +LL LG+ G G V + G+ G+ +
Sbjct: 386 IMHTYLMLLQ--GHLGRRG----------RKGPDPLVNFDTIFVGGMIKAGKRLETTKYI 433
Query: 356 EEALHKGFCPSRLVYSKLIN 375
E L +G R YSK ++
Sbjct: 434 ERTLKRGLEVPRFDYSKFLH 453
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 159/380 (41%), Gaps = 61/380 (16%)
Query: 59 VVDSFVRAG--HVSKAIQV-FGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMK 115
+++S + +G H+ + + FG E + +T+ L++ KC C + A VF+SM+
Sbjct: 87 LLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGC----IADARKVFDSMR 142
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG--------- 166
+ N+ T++A+ G +S+ R+ E+ ++ + M DGV PD F L+G
Sbjct: 143 ER---NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 167 ----------LG----------------RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
LG + G +D A + F M+ER D +N+++
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLL 255
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
+ +E ++ EM P L T+ +I + K A+ + +M G+
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
T T I L G + AL +++K +G + + +M C ++N
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN----AVTIMSAVSACSCLKVINQG 371
Query: 321 EEMQ----EGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINK 376
E+ + G+ DV V ++ G+LE+A V + +K ++ +I
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITG 427
Query: 377 LLDSNNAERAYKLFLKIKHA 396
+ +AY+LF +++ A
Sbjct: 428 YCQAGYCGKAYELFTRMQDA 447
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/384 (16%), Positives = 151/384 (39%), Gaps = 8/384 (2%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
++ ++ A R + + + R M +GV D + ++ G V + +
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFN 139
+LGM+ N +L + + A+ F M+ + +V +N+V + + G+
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER---DVIAWNSVLLAYCQNGKHE 264
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
E ++KEME +G++P T+ + + G + G+ D A ++ M+ D + AMI
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
I + + + +M PN T ++A + + ++ ++ G +
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNI 319
+ G A ++ + + + ++ + G CG +
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 320 WEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP-SRLVYSKLINKLL 378
+ MQ+ ++ + +ISG G A+ + + G + ++ +I +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 379 DSNNAERAYKLFLKIKHARSLENA 402
+ + A +LF K++ +R + N+
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNS 524
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 6/220 (2%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D+ + ++ + +AG+ KA ++F + + + + N ++ + G A +F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 112 NSMK--GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR 169
M+ GKV N AT+N + G+ + G+ +E + ++M+ P+ T L
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
E+ + RN AV NA+ + D + + M + D + T
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD----IIT 592
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFI 269
+ +I + AL +F++M G+ P GT++ I
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 7/250 (2%)
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
V + YN V ++ G N + ++KEM+ G+ PD T+ + G AG++D+A+
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND----CEPNLDTYTRI 233
+ M + +C ++ Y+ ++ D + ++ EM D PN TYT +
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 234 ITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAAL--VIYKKARRS 291
I A +R+V +AL + D M G +P T I+ + AL +I K +
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 292 GCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
G ++S E + + L ++ + I+ M G D ++ LC + + +
Sbjct: 341 GVSLS-ECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDC 399
Query: 352 VLVMEEALHK 361
L+ +E K
Sbjct: 400 FLLYQEIEKK 409
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 135/338 (39%), Gaps = 8/338 (2%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
++ + R+++ + + VLR V AD + ++V+ F G ++ A +
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 77 GNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKF 135
++ +G+ D ++ C + A + M K N TY+ + G K
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 136 GRFNEIERVMKEMEA-DG---VAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
G ++ EME DG ++P+ T+ + ++ R++EA V M R C P+
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Query: 192 TAVYNAMIFNFISVN-DFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
+I + + D K ++++ + ++ +L+R ++ +A ++F
Sbjct: 309 RVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIF 368
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC--TISMEAYKILLMRLS 308
ML GV P + + LC ++Y++ + TI + + +LL+ L
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Query: 309 KLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ G + + M + V E II L G
Sbjct: 429 QQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 110 VFNSMKGKVAF-NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
V S + + F NV T V ++ +E V+++ V D + + +
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
G ++ A + M PD Y +MI + + D+ + EM +DC N
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSV 236
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRH---GVLPPTG-TITCFIKHLCSYGPPFAALVI 284
TY+RI+ + + + AL++ EM + G++ P T T I+ C AL++
Sbjct: 237 TYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLV 296
Query: 285 YKKARRSGC 293
+ GC
Sbjct: 297 LDRMGNRGC 305
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 5/224 (2%)
Query: 34 FSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDT-EALN 92
FS ++ V M+ N V+ D ++ + + R + A F + E G++ T +L
Sbjct: 155 FSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLT 214
Query: 93 VLLKCLCERSHVGAASSVFNSM---KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEME 149
V++ LC + A + M KG V N+ T+ ++ G K F E++ V+K ME
Sbjct: 215 VVVTVLCCNGEITRARELVEEMGLVKG-VKANIVTFKSMIGCCVKRWDFEELDLVLKLME 273
Query: 150 ADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFD 209
+ V D ++ V ++G G+++EA + M ++ + ++ +YN ++ + +
Sbjct: 274 KESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVE 333
Query: 210 ECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+ ++ Y+EM S PN DTY ++ L + KV +A+ +E+
Sbjct: 334 KVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 46 VNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVG 105
V GV+A+++ ++ V+ + V + + + D ++ VL+ V
Sbjct: 239 VKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 106 AASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFL 164
A + M K + YN + G+S+FG ++ + EM + GV P+ T+ V +
Sbjct: 299 EAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLM 358
Query: 165 EGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCE 224
GL +AG++ EA ++ + D +Y+ + V D+ ++ EM+ +
Sbjct: 359 NGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFI 418
Query: 225 PNLDTYTRIITALLR-RRKVVDALQMFDEMLRHGVLPPT 262
P R+ +L RK +A + +++ G+ P +
Sbjct: 419 PGATICERLADSLFEVNRK--EAQMLITIVVKCGIKPKS 455
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 131/349 (37%), Gaps = 72/349 (20%)
Query: 92 NVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD 151
+V+ +C CE+ VG FNSM +S G+F+E+ V + M+ +
Sbjct: 126 SVIDECGCEKKVVG---RFFNSM--------------IMVYSDNGKFSEVVEVFEYMKNN 168
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE-------------------------- 185
V D T + L L R +M+ A + F M E
Sbjct: 169 EVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITR 228
Query: 186 -----------RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRII 234
+ + + + +MI + DF+E M +LD+Y +I
Sbjct: 229 ARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLI 288
Query: 235 TALLRRRKVVDA----LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALV-----IY 285
KV +A L M D+ LR + ++ +L G LV +Y
Sbjct: 289 DGFTSYGKVEEAERLVLMMHDKKLR---------VESYLYNLIMNGYSRFGLVEKVIELY 339
Query: 286 KKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNI 345
+ G T + + Y +L+ L K GK ++ E++ + D E+Y + +
Sbjct: 340 SEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRV 399
Query: 346 GQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G ++ ++ V+ E + GF P + +L + L + N E + + +K
Sbjct: 400 GMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKEAQMLITIVVK 448
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 134/312 (42%), Gaps = 2/312 (0%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDM-RVNGVEADLLMLSIVV 60
+ FF+W + L + +Y +I++ LGRR+ + +++++ + + + + V+
Sbjct: 158 IKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVI 217
Query: 61 DSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF 120
+ + G+V A + F + E G+ + + +L+ + +V A F+ M+
Sbjct: 218 YACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIV 277
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+ Y+++ +++ +++ E V+ M+ D V + V L + G+M+ A +
Sbjct: 278 CESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESIL 337
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
SM+ P+ YN +I + + + ++ + + EP+ +Y +I R
Sbjct: 338 VSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRA 397
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
+A + E+ R G P + + I YG A+ + GC S
Sbjct: 398 DNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SIL 456
Query: 301 KILLMRLSKLGK 312
I+L K+GK
Sbjct: 457 GIILQAYEKVGK 468
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
+R +G+ + M + V++ RA + + F + G +T NVLL +
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 104 VGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVF 163
+ +F K +V +YN + + K + + +K M+ DG + +
Sbjct: 715 FKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 774
Query: 164 LEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
L+ G+ +M++ + MK+ PD YN MI + DE E+ +
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHL 272
P+L +Y +I A V +A+ + EM ++P T T + L
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y ++ R + G +M G + + ++++D + +A K ++F
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK 726
Query: 81 ELGMNRDTEALNVLLKCLCE-RSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFN 139
G+ D + N ++ + + + +S++ N + ++ YN + + K +
Sbjct: 727 RHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQME 785
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
+ ++K M+ PD T+ + + G G +DE +V +KE PD YN +I
Sbjct: 786 KFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLI 845
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGV 258
+ +E + EM + P+ TYT ++TAL R + ++A++ M + G+
Sbjct: 846 KAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 5 FNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
F +++ P + ++ V++ G+ K F + + + +GV D++ + ++ ++
Sbjct: 687 FEEMIRYGFTPNTV-TFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYG 744
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAF-NVA 123
+ + N+ G + EA N LL + + S+ MK + +
Sbjct: 745 KNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHY 804
Query: 124 TYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSM 183
TYN + + + G +E+ V+KE++ G+ PD ++ ++ G G ++EA + M
Sbjct: 805 TYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 184 KERNCQPDTAVYNAMIFNFISVNDFDECMKY 214
+ RN PD Y ++ ++F E +K+
Sbjct: 865 RGRNIIPDKVTYTNLVTALRRNDEFLEAIKW 895
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 142/360 (39%), Gaps = 48/360 (13%)
Query: 43 DMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNE-------LGMNRDTEALNVLL 95
+++ +GV D + SIVV +V+AG + +A V ++E + + RD L +
Sbjct: 583 NLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM--LRIYQ 640
Query: 96 KCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
KC + + K + +N YN V ++ +E+ +EM G P
Sbjct: 641 KCDLQDK---LQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTP 697
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
+ TF V L+ G+A + E+F + +R+ D YN +I + D+
Sbjct: 698 NTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAI 756
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSY 275
M + +L+ Y ++ A + +++ E R
Sbjct: 757 KNMQFDGFSVSLEAYNTLLDAYGKDKQM--------EKFRS------------------- 789
Query: 276 GPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVY 335
I K+ ++S Y I++ + G + ++ +E++E G D+ Y
Sbjct: 790 --------ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSY 841
Query: 336 EYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
+I G +E AV +++E + P ++ Y+ L+ L ++ A K L +K
Sbjct: 842 NTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQ 901
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 12/251 (4%)
Query: 160 FGVFLEGLGRAGRMDEAFEV---FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN 216
+ + L LGR D A ++ C E Q V+N +I+ + K+++
Sbjct: 177 YSLILRVLGRREEWDRAEDLIKELCGFHE--FQKSYQVFNTVIYACTKKGNVKLASKWFH 234
Query: 217 EMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL---PPTGTITCFIKHLC 273
ML PN+ T ++ + V +A F M + G++ + IT + + L
Sbjct: 235 MMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTR-LR 293
Query: 274 SYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVE 333
Y + + K+ R + +E + ++L S+ GK +I M+ G+S ++
Sbjct: 294 LYDKAEEVIDLMKQDR---VRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNII 350
Query: 334 VYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
Y +I+G I ++E A + + G P Y +I ++N E A + ++
Sbjct: 351 AYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL 410
Query: 394 KHARSLENARN 404
K N+ N
Sbjct: 411 KRCGYKPNSFN 421
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 143/359 (39%), Gaps = 15/359 (4%)
Query: 2 VTFFNWAVKHPAL---PEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSI 58
+ FF+W + +Y ++ L R + V+ +M+ G + DL
Sbjct: 244 LAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIK 303
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH-----VGAASSVFNS 113
V F ++ +++ ++++ + + + ++LL+ L + V S + S
Sbjct: 304 VSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYES 363
Query: 114 MKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
GK + + A Y+ + + GRF+E E + K M G PD T+ + GL +A R+
Sbjct: 364 T-GK-SLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRL 421
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRI 233
+EA V M+ + C PD + +I N+ D+ + + ML + + + +
Sbjct: 422 EEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVL 481
Query: 234 ITALLRRRKVVDALQMFDEMLRHG-VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSG 292
I + K A EM+++ V P T I L AL + + ++
Sbjct: 482 IDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
Query: 293 CTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENA 351
EA+ L + L L++ +++ Y ++I G+L +A
Sbjct: 542 YPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAA----YFHVIEAFYREGRLTDA 596
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 146/369 (39%), Gaps = 20/369 (5%)
Query: 32 KFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEAL 91
K + F+ VLRD +G+ + SI++ V+ + + + + G D +
Sbjct: 105 KAYYFLDWVLRD---SGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTY 161
Query: 92 NVLLKCLCERSHVGAASSV---FNSMKGKVAFNVATYNAVA----GGWSKFGRFNEIERV 144
+ L + A +V + M + A +V A G WS E+ER
Sbjct: 162 KTIYGELSKEKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWS-----CEVERE 216
Query: 145 MKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE-VFCSMKERNCQPDTAVYNAMIFNFI 203
++EM+ V D V E + F V Q T YNA +
Sbjct: 217 LQEMKL--VLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLA 274
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
N E +EM + + +LDTY ++ + R + + +++++ M+ P
Sbjct: 275 RPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQ 334
Query: 264 TITCFIKHLCSYGPPFAALV--IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWE 321
+ +++L P LV + +K +G ++S Y + L+ +G+ I +
Sbjct: 335 DCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITK 394
Query: 322 EMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSN 381
M+ GY D Y ++ GLC +LE A V+++ +G P ++ LI +N
Sbjct: 395 AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNN 454
Query: 382 NAERAYKLF 390
++A F
Sbjct: 455 ELDKALACF 463
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 11/292 (3%)
Query: 102 SHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
S + A +F +M ++ +N++A G+S+F E+ + E+ DG+ PD TF
Sbjct: 77 SSMSYARHLFEAMSEP---DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFP 133
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
L+ A ++E ++ C + + V +I + D D ++ ++
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV-- 191
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAA 281
EP + Y +IT RR + +AL +F EM + P T+ + G
Sbjct: 192 --EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249
Query: 282 LVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISG 341
I+K A++ ++ L+ +K G ++I+E+M+ D + + +I
Sbjct: 250 KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR----YKDTQAWSAMIVA 305
Query: 342 LCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKI 393
N G+ E ++L+ E + P + + L+N + E K F ++
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 114/305 (37%), Gaps = 38/305 (12%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV-- 122
+AG +A+ F N++ G R ++ N L+ L + + K ++
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDA 177
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
++N + + G + M+EME G+ PD T+ + L
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISAL--------------- 222
Query: 183 MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
K C ++N M+ C+PNL T+ I L+ RR+
Sbjct: 223 YKHERCVIGNGLWNLMVLK--------------------GCKPNLTTFNVRIQFLVNRRR 262
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
DA + M + V P + T IK P A +Y G +++ Y+
Sbjct: 263 AWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQT 322
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKG 362
++ L K G + ++ + +++ E ++ GL GQL+ A +M E +H+
Sbjct: 323 MIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRR 381
Query: 363 FCPSR 367
P R
Sbjct: 382 VPPFR 386
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 42/249 (16%)
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
G+ D +F + ++ G +D A+ M++ PD Y +I ++ + C
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLI---SALYKHERC 228
Query: 212 M---KYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCF 268
+ +N M+ C+PNL T+ I L+ RR+ DA + M + V P + T
Sbjct: 229 VIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV 288
Query: 269 IKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGY 328
IK L R + + ++ M GY
Sbjct: 289 IKGF------------------------------FLARFPDMAE-----RVYTAMHGKGY 313
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
++++Y+ +I LC G + A + ++ + K + P+ L+ L+ ++A K
Sbjct: 314 KPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA-K 372
Query: 389 LFLKIKHAR 397
+++ H R
Sbjct: 373 SIMELVHRR 381
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 147/356 (41%), Gaps = 15/356 (4%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNV------LLKCLCE-RSHVGAASSVF 111
+VDS R G+ + ++ N++ E++NV ++ LC R + GAA V+
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSL------CESVNVEFAYGHMIDSLCRYRRNHGAARIVY 331
Query: 112 NSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG 171
+ +YNA+ G K G ++++E P T+ + +E L +
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKEL 391
Query: 172 RMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYT 231
+A V M + T +YN + +++ E + ML DC P+ T
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 232 RIITALLRRRKVVDALQMFDEMLRHGVLPPTG-TITCFIKHLCSYGPPFAAL-VIYKKAR 289
+I L + +V DA+++ D+M+ P T+ + L + G AL V+ +
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMP 511
Query: 290 RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLE 349
+ + AY ++ L KL K ++++ ++++ ++D Y II GLC +++
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVD 571
Query: 350 NAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
A ++ + VY+ + L S A + + ++ N Y
Sbjct: 572 MAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 3/250 (1%)
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEML 219
+ ++L GL E V SM + +C+PD N +I + D+ MK ++M+
Sbjct: 415 YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM 474
Query: 220 SND-CEPNLDTYTRIITALLRRRKVVDALQMFDE-MLRHGVLPPTGTITCFIKHLCSYGP 277
+ C P+ T ++ LL + + +AL + + M + + P I+ L
Sbjct: 475 TGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHK 534
Query: 278 PFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEY 337
A+ ++ + ++ T Y I++ L K W+++ D VY
Sbjct: 535 GDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAA 594
Query: 338 IISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHAR 397
+ GLC G L +A + + G P+ + Y+ +I + S AY++ +++
Sbjct: 595 FLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNG 654
Query: 398 SLENARNYWR 407
+A WR
Sbjct: 655 QAPDAVT-WR 663
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 3/231 (1%)
Query: 37 MMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGM-NRDTEALNVLL 95
++ VL M D L+ V++ + G V A++V ++ D LN ++
Sbjct: 431 ILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 96 KCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
L + A V N + + K+ V YNAV G K + +E V ++E V
Sbjct: 491 CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASV 550
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMK 213
D TT+ + ++GL ++D A + + + + + D VY A + +
Sbjct: 551 TADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACH 610
Query: 214 YYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGT 264
+ ++ + PN+ Y +I R +A Q+ +EM ++G P T
Sbjct: 611 FLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 163/433 (37%), Gaps = 79/433 (18%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLL-KCL 98
+L + + G D L LS V+ S AG +A + F G D NV++ + L
Sbjct: 77 ILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLL 136
Query: 99 CERSHVGAASSVFNSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPD 156
RS V + + K F ++ YN + R + +++ +M G PD
Sbjct: 137 YSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPD 196
Query: 157 CTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISV----------- 205
TF + G ++ A +VF M+ +P++ + +I F+ +
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256
Query: 206 -------NDFDECMK---------------YYNEMLS-----NDCEP-NLD-TYTRIITA 236
N+ D MK Y+N++ + CE N++ Y +I +
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTIS 296
L R R+ A ++ M G+ P + I LC G A + ++ S
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376
Query: 297 MEAYKILLMRLSK--------------LGKCGT---------------------LLNIWE 321
YK+L+ L K L K G +LN+
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436
Query: 322 EMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC-PSRLVYSKLINKLLDS 380
M +G D +I+GLC +G++++A+ V+++ + FC P + + ++ LL
Sbjct: 437 SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQ 496
Query: 381 NNAERAYKLFLKI 393
AE A + ++
Sbjct: 497 GRAEEALDVLNRV 509
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 105/294 (35%), Gaps = 42/294 (14%)
Query: 139 NEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM 198
+E R++ + G PD + L AGR DEA F PD N +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 199 IFNFISVNDFDECMKYYNEMLSNDCE--PNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
I + + + ++ E P+L Y R++ L +V+DA ++ +M
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 257 GVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGC-----TISMEAYKILLMRLSKLG 311
G LP T T I C A ++ + R G T+S+ L MR + G
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 312 -------------------KCGTLLNIWEEMQEGGYSSDV-EV---------------YE 336
K N+ + M GY +D+ E+ Y
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 337 YIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYKLF 390
++I LC + A ++ KG P R Y+ +I+ L RAY+L
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL 365
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 99/220 (45%), Gaps = 4/220 (1%)
Query: 44 MRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSH 103
R N + D + I++ S+ +G KAI++ + GM T A +L L ++
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 104 VGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+ A +++N M K + A YN K ++ +++EM + G+ PD ++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNY 283
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
+ G +DEA +V+ ++ NC P+ A + +IF+ +++ + + +
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPT 262
P+ +T ++ L+ +K DA + + + PP+
Sbjct: 344 KIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK--FPPS 381
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 3/262 (1%)
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+K RF++IE +++ + D + + + G+A + A F M +
Sbjct: 78 AKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSA 137
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLS--NDCEPNLDTYTRIITALLRRRKVVDALQMF 250
+NA++ + +FD+ + ++E+ N P+ +Y +I + A+++
Sbjct: 138 VSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIM 197
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
+M G+ T T + L G A ++ + + GC + AY + +M K
Sbjct: 198 RQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKE 257
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+ + EEM G D Y Y+++ C G L+ A V E P+ +
Sbjct: 258 SP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATF 316
Query: 371 SKLINKLLDSNNAERAYKLFLK 392
LI L S E+ Y +F K
Sbjct: 317 RTLIFHLCYSRLYEQGYAIFKK 338
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 120/316 (37%), Gaps = 30/316 (9%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLN 80
Y ++++ G+ F+ M M G + + ++++ + + + K Q+F +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 81 EL--GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGR 137
+ + D + +L+K C+ A + M+GK + + + K G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAG--RMDEAFEVFCSMKERNCQPDTAVY 195
+ + EM G D + V + + R+ E E SM +PDT Y
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSM---GLKPDTISY 281
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
N ++ + DE K Y + N+C PN T+ +I L R +F + +
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVY 341
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+P T +KHL LV KK + L+R K +
Sbjct: 342 MHKIPDFNT----LKHLV------VGLVENKKRDDAKG----------LIRTVKKKFPPS 381
Query: 316 LLNIWEEMQE--GGYS 329
LN W++++E G YS
Sbjct: 382 FLNAWKKLEEELGLYS 397
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 8/269 (2%)
Query: 23 VIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNEL 82
+ V+ L + + FS + ++ + N LS ++ S+ RA A+++F +++L
Sbjct: 72 LTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKL 131
Query: 83 GMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK---VAFNVATYNAVAGGWSKFGRFN 139
G R + N LL +F+ + + + +Y + + G+
Sbjct: 132 GTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPE 191
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
+ +M++ME GV F L L + G +DEA ++ M + C D VYN +
Sbjct: 192 KAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRL 251
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
N + + + EM S +P+ +Y ++TA + + +A ++++ + +
Sbjct: 252 MN-AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ---- 306
Query: 260 PPTGTITCFIKHLCSYGPPFAALVIYKKA 288
P T I HLC G L ++KK+
Sbjct: 307 PNAATFRTLIFHLCINGLYDQGLTVFKKS 335
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 45 RVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHV 104
R N + D + +++ S+ +G KA+++ ++ G+ A +L L + V
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 105 GAASSVFNSMKGK------VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCT 158
A S++ M K +NV NA + ++ +M+EM + G+ PD
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPER------VKELMEEMSSVGLKPDTV 279
Query: 159 TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM 218
++ + G M EA +V+ ++ QP+ A + +IF+ +D+ + + +
Sbjct: 280 SYNYLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKS 335
Query: 219 LSNDCEPNLDTYTRIITALLRRRKVVDA 246
P+ T + L++ ++ DA
Sbjct: 336 AIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 4/250 (1%)
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+K RF++IE +++ + + T + GRA D A ++F M +
Sbjct: 78 AKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTV 137
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLS--NDCEPNLDTYTRIITALLRRRKVVDALQMF 250
+NA++ + + F+ + ++E N+ P+ +Y +I + K A+++
Sbjct: 138 VSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIM 197
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKL 310
+M GV T + L G A ++ + GC + Y + LM +K
Sbjct: 198 RDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKE 257
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR-LV 369
+ + EEM G D Y Y+++ C G + A V E R L+
Sbjct: 258 SP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLI 316
Query: 370 YSKLINKLLD 379
+ IN L D
Sbjct: 317 FHLCINGLYD 326
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 128/338 (37%), Gaps = 37/338 (10%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKV 118
V+ SFVR G VSKA + + LG+ + E + L+ + + A ++ +
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK 700
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
+ ++ + + G + + E G P T + + L G+ EA
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 179 VFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALL 238
+ + E+N + DT YN +I + + Y M ++ ++ TY +I+
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 239 RRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISME 298
R ++ A+++F ARRSG + +
Sbjct: 821 RGLQLDKAIEIFS-----------------------------------NARRSGLYLDEK 845
Query: 299 AYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEA 358
Y ++M K GK L+++ EMQ+ G Y ++ +C +L + V + +A
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQA 904
Query: 359 LHK-GFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
+ + G C Y LI +S+ A K +K
Sbjct: 905 MERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 116/314 (36%), Gaps = 1/314 (0%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNS-MKGK 117
++D++VR G + A +F E G + +++L+ L R A + + ++
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAF 177
+ + YN + + G+ + + M GV T+ + GR ++D+A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
E+F + + D +Y MI ++ E + ++EM +P +Y ++
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKIC 889
Query: 238 LRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISM 297
R + ++ M R+G T I+ A + G +S
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSH 949
Query: 298 EAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
+ LL L K G + +M E G S D I+ G G E +L E+
Sbjct: 950 SHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEK 1009
Query: 358 ALHKGFCPSRLVYS 371
+ R V S
Sbjct: 1010 MIRSSVEDDRFVSS 1023
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+P I +Y ++ GR + + + R +G+ D + + ++ + + G +S+A
Sbjct: 804 GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEA 863
Query: 73 IQVFGNLNELGMNRDTEALNVLLK-CLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGG 131
+ +F + + G+ T + N+++K C R H + + +++TY +
Sbjct: 864 LSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQV 923
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+++ +F E E+ + ++ G+ + F L L +AG M+EA +C M E PD
Sbjct: 924 YAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+A ++ +++ D ++ + +Y +M+ + E +
Sbjct: 984 SACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 2/278 (0%)
Query: 111 FNSMKGKVAF--NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
F+ MK ++++ +V Y V + + G+ E EM G PD G L
Sbjct: 175 FSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYA 234
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
R GR + +++ER T+VYN M+ + + + + + EM+ PN
Sbjct: 235 RWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEF 294
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
TYT ++++ ++ +AL+ F EM G +P T + I G A+ +Y+
Sbjct: 295 TYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM 354
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
R G S +L K L+++ +M+ +D + II +G
Sbjct: 355 RSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLF 414
Query: 349 ENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERA 386
+A + EE Y + L+S N +A
Sbjct: 415 HDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKA 452
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 138/380 (36%), Gaps = 77/380 (20%)
Query: 21 YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV---RAGHVSKAIQVFG 77
+ V V L R K F + +L N + D S V + + RA + ++IQ F
Sbjct: 78 FSVAVVTLAREKHFVAVSQLLDGFIQN--QPDPKSESFAVRAIILYGRANMLDRSIQTFR 135
Query: 78 NLNELGMNRDTEALNVLL-KCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
NL + + R ++LN LL CL +
Sbjct: 136 NLEQYEIPRTVKSLNALLFACLMAKD---------------------------------- 161
Query: 137 RFNEIERVMKEM-EADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
+ E RV EM + G+ PD T+ + L +G ++ + M+ + +P A +
Sbjct: 162 -YKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASF 220
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
MI F FDE K M + TY +I L +R+K +A + D ++
Sbjct: 221 GLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS 280
Query: 256 HGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGT 315
+ P + T + I CS
Sbjct: 281 CRMRPNSVTYSLLIHGFCSE-----------------------------------ENLDE 305
Query: 316 LLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLIN 375
+N++E M GY D E Y +I LC G E A+++ E++ K + PS V L+N
Sbjct: 306 AMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVN 365
Query: 376 KLLDSNNAERAYKLFLKIKH 395
L + + A +L +K
Sbjct: 366 GLASRSKVDEAKELIAVVKE 385
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 113 SMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR--- 169
S +G V N TY + G + G + + + KEM +DGV PD T+ + L+GL +
Sbjct: 8 SQRGLVG-NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 170 ------AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDC 223
AG++++ +++FCS+ + +P+ Y MI F +E + +M +
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 224 EPNLDTYTRIITALLRRRKVVDALQMFDEM 253
P+ TY +I A LR + ++ EM
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 75/187 (40%), Gaps = 10/187 (5%)
Query: 178 EVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITAL 237
E+F M +R +T Y +I D D + + EM+S+ P++ TY ++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 238 LRR---------RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
+ KV D +F + GV P T T I C G A +++K
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
+ G Y L+ + G + +EM+ ++ D Y +++ + + G+L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRL 180
Query: 349 ENAVLVM 355
+ L M
Sbjct: 181 DKGFLEM 187
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 284 IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC 343
++++ + G + Y L+ L + G C I++EM G D+ Y ++ GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 344 NIGQLENAVLV--MEEALH-------KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIK 394
G+LE A++ +E+ KG P+ + Y+ +I+ E AY LF K+K
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 395 HARSLENARNY 405
L ++ Y
Sbjct: 123 EDGPLPDSGTY 133
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 25/200 (12%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKC 97
M + R+M G+ + + + ++ +AG A ++F + G+ D N+LL
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 98 LCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDC 157
LC+ + A + GKV GW F + GV P+
Sbjct: 61 LCKNGKLEKAL-----VAGKVE----------DGWDLFC----------SLSLKGVKPNV 95
Query: 158 TTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNE 217
T+ + G + G +EA+ +F MKE PD+ YN +I + D + E
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 218 MLSNDCEPNLDTYTRIITAL 237
M S + TY + L
Sbjct: 156 MRSCRFAGDASTYGLVTDML 175
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 247 LQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMR 306
+++F EM + G++ T T T I+ L G A I+K+ G + Y ILL
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 307 LSKLGK------CGTLLNIWE---EMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
L K GK G + + W+ + G +V Y +ISG C G E A + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 358 ALHKGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
G P Y+ LI L + + +L +++ R +A Y
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
+ + +++ A +R + + + +L M G++ + V+ + +A + AIQ+F
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFG 136
+ + G + LL L + A V+N M K + N+ Y +A +
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
+FN ++ ++KEM + G+ P TF + G R G A+E F MK N +P+ Y
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNL 227
+I E L+ND +P L
Sbjct: 603 MLI-----------------EALANDAKPRL 616
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 87/225 (38%)
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
V+ +N + SK G + R++ +ME G+ P + L +A A ++F
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
+M + +P Y A++ +DE + +N M+ EPNL YT + + L ++
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
K + EM G+ P T I G A + + + + Y+
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+L+ L+ K + + Q G + Y+ ++ G
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 25/247 (10%)
Query: 116 GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDE 175
G + N+ YN++ G FG E E+++K+ME +G+ P+ T+ + G +
Sbjct: 181 GVIGPNLFIYNSLLGAMRGFG---EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLK 237
Query: 176 AFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEM--------LSNDCEPN- 226
A + KE+ +P+ Y+ + + + D ++++ E+ + ND +
Sbjct: 238 ALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDW 297
Query: 227 ------LDTYT-RIITALLRRRKVVD------ALQMFDEMLRHGVLPPTGTITCFIKHLC 273
L+ + RI ++RR V D L++ + M GV P I
Sbjct: 298 EFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACT 357
Query: 274 SYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVE 333
+YK+ R IS+ L+ + K K L I+E++ + G +
Sbjct: 358 REEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNL 417
Query: 334 VYEYIIS 340
YE ++S
Sbjct: 418 SYELVVS 424
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 159/393 (40%), Gaps = 28/393 (7%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
D+ S+ I+ + V M V+G+E DL + +V F S+ I +
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL---ATIVSVFAGCAD-SRLISLG 315
Query: 77 GNLNELGM----NRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
++ +G+ +R+ N LL + + +A +VF M + +V +Y ++ G+
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR---SVVSYTSMIAGY 372
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
++ G E ++ +EME +G++PD T L R +DE V +KE + D
Sbjct: 373 AREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI 432
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
V NA++ + E ++EM D + ++ II + +AL +F+
Sbjct: 433 FVSNALMDMYAKCGSMQEAELVFSEMRVKD----IISWNTIIGGYSKNCYANEALSLFNL 488
Query: 253 MLRHGVLPPTG-TITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY----KILLMRL 307
+L P T+ C + P A+L + K R I Y + +
Sbjct: 489 LLEEKRFSPDERTVACVL-------PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
KCG LL + + + S D+ + +I+G G + A+ + + G
Sbjct: 542 DMYAKCGALL-LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 368 LVYSKLINKLLDSNNAERAYKLFLKIKHARSLE 400
+ + L+ S + ++ F ++H +E
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 10/275 (3%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
F++A + P S+ +++ LGR ++F+ + VL R +G + + ++ +
Sbjct: 70 IFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVY 129
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK----VA 119
A K + F + E + LN +L L SH G F K V
Sbjct: 130 AEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV--SHRGYLQKAFELFKSSRLHGVM 187
Query: 120 FNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEV 179
N +YN + + + ++ +M V PD ++ + ++G R G+++ A E+
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 180 FCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLR 239
M + PD +I FDE KY EM+S P+ ++
Sbjct: 248 LDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCS 303
Query: 240 RRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
KV +A + + ++++G + T I +C+
Sbjct: 304 FGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 10/240 (4%)
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
G + +AFE+F S + P+T YN ++ F +D + + +ML D P++D+Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 231 TRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARR 290
+I R+ +V A+++ D+ML G +P I LC G ++
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 291 SGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLEN 350
G + L+ GK ++ E + + G + + +E +I +CN + E
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Query: 351 AVLVMEEALHKGFC-PSRLVYSKLINKLL-----DSNNAERAYKLFLKIKHARSLENARN 404
L +E+A+ + +R+V + NK + D AE +K +LE R+
Sbjct: 345 IKLFLEDAVKEEITGDTRIVDVGIENKKMPEIEQDDAAAETVDSSTVKFGTPEALEYVRS 404
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 101/227 (44%), Gaps = 7/227 (3%)
Query: 22 RVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNE 81
R++ + R + + + R++GV + ++++ +F +S A Q+FG + E
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 82 LGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEI 141
+ D ++ +L++ C + V A + + M K + GG G F+E
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK---GFVPDRTLIGGLCDQGMFDEG 275
Query: 142 ERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFN 201
++ ++EM + G +P + ++G G+++EA +V + +N + + M+
Sbjct: 276 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDV-VEVVMKNGETLHSDTWEMVIP 334
Query: 202 FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQ 248
I D E +K + L + + + TRI+ + +K+ + Q
Sbjct: 335 LICNEDESEKIKLF---LEDAVKEEITGDTRIVDVGIENKKMPEIEQ 378
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/344 (18%), Positives = 144/344 (41%), Gaps = 38/344 (11%)
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG--KVAFNV 122
++G ++A ++F + E G+ E LL + + A S+ + MK + +V
Sbjct: 136 KSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDV 195
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
TY+ + +F+ ++ + KEM+ + P+ T + L G GR GR D+ +V
Sbjct: 196 FTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSD 255
Query: 183 M-KERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M C+PD N ++ F ++ D +Y + + EP T+ +I + ++R
Sbjct: 256 MLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKR 315
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
M+D+M ++++ Y + T S Y
Sbjct: 316 -------MYDKM--------------------------SSVMEYMRKLEFPWTTS--TYN 340
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHK 361
++ + +G + +++M+ G +D + + +I+G N G + ++ A
Sbjct: 341 NIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKF 400
Query: 362 GFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
+ Y+ +I+ +++ ++++++K + + ++R +
Sbjct: 401 EIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 2/216 (0%)
Query: 23 VIVKALGRRKFFSFMMGVLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNE 81
+++ GR F M VL DM V+ + D+ ++I++ F G + +
Sbjct: 235 IVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRN 294
Query: 82 LGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGKVAFNVATYNAVAGGWSKFGRFNE 140
G+ +T N+L+ ++ SSV M K + + +TYN + ++ G
Sbjct: 295 FGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKN 354
Query: 141 IERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIF 200
+E +M ++G+ D TF + G AG + + +TA YNA+I
Sbjct: 355 MELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIS 414
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
+D E + Y M C + T+ ++ A
Sbjct: 415 ACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEA 450
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 154/377 (40%), Gaps = 7/377 (1%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKAIQVFGN 78
+YR ++K L + + VL + V+ + + V+ ++ +G + +AI+VF
Sbjct: 74 AYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFK 133
Query: 79 LNELGMNRDTEALNVLLKCLC-ERSHVGAASSVF-NSMKGKVAFNVATYNAVAGGWSKFG 136
+ LN LL L +R + + + + V +T+ + + G
Sbjct: 134 IPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIG 193
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC---SMKERNCQPDTA 193
+ +++ M D V D + L + + + F+V +++ P
Sbjct: 194 EVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDSSCFDVIGYLEDLRKTRFSPGLR 252
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
Y ++ + E + N+M + EP+L YT ++ ++ A ++FDE+
Sbjct: 253 DYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDEL 312
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
L G+ P T +I LC AL + + G ++ Y IL+ L K G
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDL 372
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKL 373
+W+EM+ G + + ++ +IS + ++ A ++EEA + ++
Sbjct: 373 SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEV 432
Query: 374 INKLLDSNNAERAYKLF 390
I++L + ++A +L
Sbjct: 433 ISRLCEKGLMDQAVELL 449
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 10/252 (3%)
Query: 12 PALPE----DIGSYRVIVKAL---GRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFV 64
P LP+ D Y ++K GR + M+ +R D + + VV +FV
Sbjct: 404 PLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFV 463
Query: 65 RAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNV 122
AG + +A QV + +G+ + NVLLK C++ + A + M + +V
Sbjct: 464 NAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 123 ATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCS 182
+YN + G EM G+AP ++ ++ +G+ A VF
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 183 -MKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
M + + D +N ++ + + ++ + + M N PN+ TY + + + R
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Query: 242 KVVDALQMFDEM 253
K DAL ++ E+
Sbjct: 644 KPGDALLLWKEI 655
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 99/247 (40%), Gaps = 5/247 (2%)
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMK---ERNCQPDTAVYNAMIFNFISVNDFDE 210
APD + ++G + GR+ + + +M+ +RN PD Y ++ F++ D
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 211 CMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH-GVLPPTGTITCFI 269
+ EM N TY ++ ++ ++ A + EM G+ P + I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 270 KHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEM-QEGGY 328
AL + + R G + +Y L+ + G+ +++EM +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 329 SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDSNNAERAYK 388
D+ + ++ G C +G +E+A V+ GF P+ Y L N + + A
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 389 LFLKIKH 395
L+ +IK
Sbjct: 651 LWKEIKE 657
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 6/245 (2%)
Query: 87 DTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNV----ATYNAVAGGWSKFGRFNEIE 142
D+ L+K + V + + +M+ + N TY V + G +
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 143 RVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER-NCQPDTAVYNAMIFN 201
+V+ EM GV + T+ V L+G + ++D A ++ M E +PD YN +I
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 202 FISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG-VLP 260
I ++D + ++NEM + P +YT ++ A + A ++FDEM+ V
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
++ C G A + + + +G ++ Y L +S+ K G L +W
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLW 652
Query: 321 EEMQE 325
+E++E
Sbjct: 653 KEIKE 657
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 14 LPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVN-GVEADLLMLSIVVDSFVRAGHVSKA 72
+P + +Y V++K ++ +LR+M + G+E D++ +I++D + + A
Sbjct: 483 VPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGA 542
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVAG 130
+ F + G+ + L+K A+ VF+ M +V ++ +N +
Sbjct: 543 LAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVE 602
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
G+ + G + +RV+ M+ +G P+ T+G G+ +A + +A ++ +KER
Sbjct: 603 GYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 104/245 (42%), Gaps = 1/245 (0%)
Query: 9 VKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGH 68
+K +PE Y ++++A + + ++ + D M VV +VR G+
Sbjct: 274 MKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGN 333
Query: 69 VSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFN-SMKGKVAFNVATYNA 127
+ ++V + + + L ++ ++ A V+ +MK + TY
Sbjct: 334 METTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAI 393
Query: 128 VAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERN 187
+ + ++N+ E + EM G + ++ G+ R+ +A + MK+R
Sbjct: 394 AINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRG 453
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
C+P+ +YN++I D K + EM P+ +YT +I+A R +++ +
Sbjct: 454 CKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCV 513
Query: 248 QMFDE 252
+++ E
Sbjct: 514 ELYQE 518
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 167/401 (41%), Gaps = 19/401 (4%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMR-----VNGVEADLLMLSIVVDSFVRAGHVSK 71
++ + + ++ L K + ++ V D+R +G L+ S + D R H
Sbjct: 103 ELRTTKHLISYLVSSKSWDLLVSVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHC-- 160
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVAT--YNAVA 129
+ VF + L ++ A + +K + + VF+ +K V + Y +
Sbjct: 161 LLSVFRSDKSLAVS----ASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIM 216
Query: 130 GGWSKFGRFNEIERVMKEMEADGVA----PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKE 185
K G +++ + +E ++ ++ + + + L ++GR EA EV MK+
Sbjct: 217 EAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKD 276
Query: 186 RNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVD 245
+ + +Y+ +I F + K + E + + +++ +R +
Sbjct: 277 KGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMET 336
Query: 246 ALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFA-ALVIYKKARRSGCTISMEAYKILL 304
L++ M R L T I C I + S FA A+ +Y+ A + C Y I +
Sbjct: 337 TLEVVAAM-RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAI 395
Query: 305 MRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFC 364
+L K +++EM + G+ V Y I+ +L +AV +M + +G
Sbjct: 396 NAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCK 455
Query: 365 PSRLVYSKLINKLLDSNNAERAYKLFLKIKHARSLENARNY 405
P+ +Y+ LI+ + + RA K++ ++K A+ L + +Y
Sbjct: 456 PNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 115/304 (37%), Gaps = 40/304 (13%)
Query: 57 SIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG 116
+IV S ++G +A++V + + G+ +E ++L++ E V +F G
Sbjct: 252 TIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGG 311
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
K +++K+ P+ V + R G M+
Sbjct: 312 K-------------------------KLLKD-------PEMCLKVVLM--YVREGNMETT 337
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITA 236
EV +M++ + + A++ F F E +K Y + +CE TY I A
Sbjct: 338 LEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINA 397
Query: 237 LLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPP---FAALVIYKKARRSGC 293
R K A +FDEM++ G + + + YG A+ + K ++ GC
Sbjct: 398 YCRLEKYNKAEMLFDEMVKKGF---DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGC 454
Query: 294 TISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVL 353
++ Y L+ + IW+EM+ D Y +IS +LE V
Sbjct: 455 KPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVE 514
Query: 354 VMEE 357
+ +E
Sbjct: 515 LYQE 518
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVL--- 94
+ V+ MR ++ +L +V+ F + ++A++V+ E M + EA V
Sbjct: 338 LEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVY----EWAMKEECEAGQVTYAI 393
Query: 95 -LKCLCERSHVGAASSVFNSMKGKVAFN--VATYNAVAGGWSKFGRFNEIERVMKEMEAD 151
+ C A +F+ M K F+ V Y+ + + K R ++ R+M +M+
Sbjct: 394 AINAYCRLEKYNKAEMLFDEMVKK-GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQR 452
Query: 152 GVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDEC 211
G P+ + ++ GRA + A +++ MK PD Y +MI + + + C
Sbjct: 453 GCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERC 512
Query: 212 MKYYNEMLSN 221
++ Y E N
Sbjct: 513 VELYQEFRMN 522
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 135/335 (40%), Gaps = 2/335 (0%)
Query: 14 LPEDIGS-YRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
L ++ GS Y ++ +L + + VL +M+ G+ + S+++ +F A V
Sbjct: 243 LAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVIT 302
Query: 73 IQVFGNLNELGMNRDTE-ALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGG 131
++F + +D E L V+L + E + V K ++ A+ G
Sbjct: 303 EKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+SK F E +V + + T+ + + R + ++A +F M ++
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
Y+ ++ + + ++ +M C+PN+ Y +I R + A +++
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK 482
Query: 252 EMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLG 311
EM R VLP + T I + +Y++ R + I I++ SK
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTS 542
Query: 312 KCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIG 346
+ L+ + ++M+ G D +Y ++ L + G
Sbjct: 543 RIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 16/270 (5%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRD-MRVNGVEADLLMLSIVVDS 62
FNWA + P + SY + ++ LG K + M ++ + V + + L SI+
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF-Y 216
Query: 63 FVRAGHVSKAIQVFGNL---NELGMNRDTEALNVLLKCLCER------SHV--GAASSVF 111
F +AG + +A+ +F ++ L ++L K L R +HV S+F
Sbjct: 217 FTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLF 276
Query: 112 NSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA-DGVAPDCTTFGVFLEGLGR 169
M + +V N + G+ N+ R+ +M P+ T+ + GL
Sbjct: 277 RQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCA 336
Query: 170 AGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDT 229
GR A E+ MK + P+ YN+++ F + D+ +K EM+ N + +
Sbjct: 337 QGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFIS 396
Query: 230 YTRIITALLRRRKVVDALQMFDEMLRHGVL 259
Y ++ R+ K +A ++ EMLR L
Sbjct: 397 YRTLVDESCRKGKYDEATRLL-EMLREKQL 425
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 105/246 (42%), Gaps = 2/246 (0%)
Query: 18 IGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFG 77
I Y ++ + + +L+ M NG+ D+L + +V + ++G+ +A + F
Sbjct: 384 ISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFE 443
Query: 78 NLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFG 136
NL G+ D + ++ + M+ K + + Y A+ +++ G
Sbjct: 444 NLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMG 503
Query: 137 RFNEIERVMKEMEADGVAP-DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVY 195
N + M+ P + +F+E G+AG++D+A F M++ +PD
Sbjct: 504 DANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCI 563
Query: 196 NAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLR 255
++ + N D+ ++ ++ + E + TYT ++ + + +A Q+ ++ +
Sbjct: 564 ANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQ 623
Query: 256 HGVLPP 261
G PP
Sbjct: 624 LGEAPP 629
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+++ Y+ + +K ++ER++K+M +G+ PD T + ++G + A E F
Sbjct: 383 SISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAF 442
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
++K +PD +Y AMI +++ + EM + + + + + Y ++ A
Sbjct: 443 ENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAY--- 499
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAY 300
QM D G I+ +++ S GP +S EAY
Sbjct: 500 ------AQMGDANGAAG-------ISSSMQY-ASDGP-----------------LSFEAY 528
Query: 301 KILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALH 360
+ + K G+ + ++EM++ G+ D + ++ L+ A+ ++ +
Sbjct: 529 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 588
Query: 361 KGFCPSRLVYSKLINKLLDSNNAERAYKLFLKIKH 395
G + Y+ L++ + + E A +L +KI
Sbjct: 589 DGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQ 623
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 40 VLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC 99
+L DMR +GV D LSI++ + + Q +L G + A L+
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 100 ERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTT 159
+ V A VF+ + K N+ ++NA+ GG++ GR + ++ ++M A VAP+ T
Sbjct: 372 KWGRVDTARYVFDKLPRK---NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 160 FGVFLEGLGRAGRMDEAFEVFCSMKE-RNCQPDTAVYNAMI 199
F L +G ++ +E+F SM E +P Y MI
Sbjct: 429 FLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 138/359 (38%), Gaps = 20/359 (5%)
Query: 11 HPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVS 70
H P +I Y ++ F + + +R +G+ +V+ + RA
Sbjct: 70 HTQFP-NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRK 128
Query: 71 KAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAG 130
I + + + G N D A+ LL + A +F+ + + +V T+ A+
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR---SVVTWTALFS 185
Query: 131 GWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQP 190
G++ GR E + K+M GV PD L G +D + M+E Q
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
++ V ++ + ++ ++ M+ E ++ T++ +I + +++F
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMV----EKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 251 DEMLRHGVLPPTGTITCFIKHLCSYGP-PFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
+ML+ + P +I F+ S G I R T A ++ M
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM---- 357
Query: 310 LGKCGTL---LNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCP 365
KCG + +++EM+E D+ + ISGL G ++ + V + G P
Sbjct: 358 YAKCGAMARGFEVFKEMKE----KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 9/215 (4%)
Query: 62 SFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFN 121
S + A + + Q+ L ++ D LL + +H+ A F SM V N
Sbjct: 250 SLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM---VVRN 306
Query: 122 VATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFC 181
V ++NA+ G+++ G E R+ +M + + PD TF L + + E +V
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 182 SMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRR 241
+ ++ +V N++I ++ + E + ++ + EP+L ++T +I AL
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR----EPDLVSWTSVIGALASHG 422
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
++LQMF+ ML+ L P + CS+G
Sbjct: 423 FAEESLQMFESMLQK--LQPDKITFLEVLSACSHG 455
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)
Query: 39 GVLRDMRV---NGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLL 95
G LRD R + DL+ + ++D + R +SKA ++F + E R+T + + ++
Sbjct: 199 GELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPE----RNTVSWSTMV 254
Query: 96 KCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAP 155
+ + A +F+ M A NV T+ + G+++ G E +R++ +M A G+
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLP-AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 156 DCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYY 215
D L +G + + +K N + V NA++ + + + +
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 216 NEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCS 274
N++ D L ++ ++ L +A+++F M R G+ P T FI LCS
Sbjct: 374 NDIPKKD----LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT---FIAVLCS 425
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 106/241 (43%), Gaps = 11/241 (4%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
++ ++K+ + K F + + G + DL + + ++ +V+ G + A +VF
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF--- 192
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFN 139
+ +RD + L+K R ++ A +F+ + K +V ++NA+ G+++ G +
Sbjct: 193 -DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK---DVVSWNAMISGYAETGNYK 248
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMI 199
E + K+M V PD +T + ++G ++ +V + + + + NA+I
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 200 FNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVL 259
+ + + + + D + ++ +I +AL +F EMLR G
Sbjct: 309 DLYSKCGELETACGLFERLPYKD----VISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 260 P 260
P
Sbjct: 365 P 365
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 108/274 (39%), Gaps = 42/274 (15%)
Query: 38 MGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEA----LNV 93
+ + RDMR + LL ++ + + + Q+ G + + G+N D A ++V
Sbjct: 439 LNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 94 LLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGV 153
C C + + VF+ MK K ++ +N++ G+ + E + E++
Sbjct: 499 YSNCYCLKD----SRLVFDEMKVK---DLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 154 APDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER--NCQP--------------------- 190
PD TF + G + E C + +R C P
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 191 --------DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRK 242
D +N++I ++ + + + ++ +M+S EPN T+ +++A
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYG 276
V D L+ F+ MLR G+ P T C + L G
Sbjct: 672 VEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAG 705
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 15/269 (5%)
Query: 4 FFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSF 63
FF W + D +Y + + LG+ KF ++ +MR G E ++ V F
Sbjct: 273 FFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRF 332
Query: 64 VRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVA 123
+ + +A+ +F E+ M + + N C C + + + A V
Sbjct: 333 CQTKLIKEAVDLF----EIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVY 388
Query: 124 TYN----------AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRM 173
T N +V R + ++KEM+ G P + L R G+
Sbjct: 389 TKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKK 448
Query: 174 DEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD-TYTR 232
DEA E M+ D +++ + + DE + + +M+ N D ++ +
Sbjct: 449 DEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEK 508
Query: 233 IITALLRRRKVVDALQMFDEMLRHGVLPP 261
++ A + +V DA ++ + L P
Sbjct: 509 LVLAYCNKNQVRDAYKLLSAQVTKNQLKP 537
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 47 NGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGA 106
+G +D L+++ ++D + + + A +VF + + RDT + NVL C
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK----RDTVSWNVLFSCYLRNKRTRD 197
Query: 107 ASSVFNSMK----GKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGV 162
+F+ MK G V + T + G + ++V ++ +G++
Sbjct: 198 VLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNT 257
Query: 163 FLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSND 222
+ R G MD+A++VF M+ERN TA+ + + N E ++ +NEML
Sbjct: 258 LVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG----KEAIEAFNEMLKFG 313
Query: 223 CEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
P T T +++A V + + FD M
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 103 HVGAASSVFNSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFG 161
++ A S+ MK V + N + ++K +E RV KEM G P+ T+
Sbjct: 203 YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYS 262
Query: 162 VFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSN 221
++G+ GR+ + + M+ + P+ + Y +I + DE ++ +ML+N
Sbjct: 263 YLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLAN 322
Query: 222 DCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
P++ TY ++T L R + +AL+M +E
Sbjct: 323 SLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 9/207 (4%)
Query: 208 FDECMKYYNEML-SNDCEPNLDTYTRIITALLRRRKVVDALQMF--------DEMLRHGV 258
F+ YN+ML S+D +P+L+TYT ++++LL+R ++ ++ +M +GV
Sbjct: 160 FNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGV 219
Query: 259 LPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLN 318
+P T + IK A+ ++K+ G + Y L+ + + G+ G L
Sbjct: 220 IPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLG 279
Query: 319 IWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLL 378
++EMQ G + Y +I L +L+ AV V+ + L P L Y+ ++ +L
Sbjct: 280 FYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339
Query: 379 DSNNAERAYKLFLKIKHARSLENARNY 405
A ++ + K + RNY
Sbjct: 340 RGGRGSEALEMVEEWKKRDPVMGERNY 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%)
Query: 138 FNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNA 197
+ + + K+M+++GV PD + ++ + +DEA VF M +P+ Y+
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 198 MIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHG 257
++ + + +Y EM PN Y +I +L R++ +A+++ +ML +
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 258 VLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGK 312
+ P T + LC G AL + ++ ++ + Y+ L+ + L K
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNK 378
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 15/249 (6%)
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE-GLGRAGRMDEAF 177
A++ A+ G R N +E +++E+ A + + GR + AF
Sbjct: 110 AYHTMIKQAITGK-----RNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAF 164
Query: 178 EVFCSM-KERNCQPDTAVYNAMIFNFIS-VNDFDECMKYYN-------EMLSNDCEPNLD 228
+V+ M + + +PD Y ++ + + N + C Y + +M SN P+
Sbjct: 165 DVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTF 224
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
II A + +V +A+++F EM +G P T + +K +C G L YK+
Sbjct: 225 VLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEM 284
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQL 348
+ G + Y +L+ LS + + + +M S D+ Y +++ LC G+
Sbjct: 285 QVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRG 344
Query: 349 ENAVLVMEE 357
A+ ++EE
Sbjct: 345 SEALEMVEE 353
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 12/239 (5%)
Query: 107 ASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
A +VF+ + VA ++N + + G + + V +M + GV PD TF L
Sbjct: 363 AETVFSKTQKDVA---ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ +++ ++ S+ E + D + +A++ + + E + +N + D
Sbjct: 420 CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD---- 475
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYK 286
+ ++T +I+A + +AL FDEM + G+ P T+ + G L +
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Query: 287 KAR-RSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSD-VEVYEYIISGLC 343
+ R + G +E Y + + LG+ G LL +E +Q+ +SD E+ + S C
Sbjct: 536 QMRSKYGIEPIIEHYSCM---IDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACC 591
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 154/385 (40%), Gaps = 41/385 (10%)
Query: 24 IVKALGR--RKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNE 81
++KA G R+F M+ L + +G D+++ S +V + + ++QVF + E
Sbjct: 113 VIKAYGALGREFLGRMIHTL--VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE 170
Query: 82 LGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGK------VAFNVATYNAVAGGWSKF 135
RD + N ++ C + A +F M+ V+ VA W +
Sbjct: 171 ----RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 136 GRFNEIER--VMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTA 193
G+ EI R V K E D ++ G+ ++ A EVF M ++
Sbjct: 227 GK--EIHRKCVKKGFELDEYVN-----SALVDMYGKCDCLEVAREVFQKMPRKS----LV 275
Query: 194 VYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEM 253
+N+MI +++ D C++ N M+ P+ T T I+ A R R ++ + +
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 254 LRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKC 313
+R V I G A ++ K ++ E++ +++ +G
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD----VAESWNVMISSYISVGNW 391
Query: 314 GTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK- 372
+ ++++M G DV + ++ + LE + +H SRL +
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG-----KQIHLSISESRLETDEL 446
Query: 373 LINKLLD----SNNAERAYKLFLKI 393
L++ LLD N + A+++F I
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSI 471
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 157/384 (40%), Gaps = 72/384 (18%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
E L++ + V A H+ I G++N + LL + ++ A
Sbjct: 45 EEALILRRLSEGGLVHARHLLDKIPQRGSINRV------VYWTSLLSKYAKTGYLDEARV 98
Query: 110 VFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEA--------------DGVAP 155
+F M + N+ T NA+ G+ K R NE + +EM DG +
Sbjct: 99 LFEVMPER---NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSE 155
Query: 156 DCT------------TFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFI 203
D ++ + GL R G M++A +VF +M R D +NAMI +I
Sbjct: 156 DAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYI 211
Query: 204 SVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTG 263
+ +E + +M E N+ T+T ++ R V +A ++F EM ++ T
Sbjct: 212 ENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
Query: 264 TITCFIKHLCSYGPPF-AALVIYKKARR-------SGCTISMEAYK-----ILLMRLSKL 310
I+ F ++ + AL+++ + ++ +G T+ AY + RL +
Sbjct: 268 MISGF-----AWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQ 322
Query: 311 GKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVY 370
+ N WE + G + V+ Y SGL + +A ++ E+ C
Sbjct: 323 LHAQVISNGWETVDHDGRLAKSLVHMYASSGL-----IASAQSLLNESFDLQSC------ 371
Query: 371 SKLINKLLDSNNAERAYKLFLKIK 394
+ +IN+ L + + ERA LF ++K
Sbjct: 372 NIIINRYLKNGDLERAETLFERVK 395
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 15/215 (6%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
D + + ++D ++ AG VS+A +F L++ +D V++ L + A+S+
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHD----KDGVTWTVMISGLVQNELFAEAASLL 454
Query: 112 NSMK--GKVAFNVATYNAV---AGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+ M G N +TY+ + AG S + I V+ + A PD +
Sbjct: 455 SDMVRCGLKPLN-STYSVLLSSAGATSNLDQGKHIHCVIAKTTA-CYDPDLILQNSLVSM 512
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
+ G +++A+E+F M Q DT +N+MI D+ + + EML + +PN
Sbjct: 513 YAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPN 568
Query: 227 LDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPP 261
T+ +++A + L++F M + P
Sbjct: 569 SVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 123/273 (45%), Gaps = 18/273 (6%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNG-VEADLLMLSIVVDS---FVRAGHVSKA 72
++ ++ ++ + FF G+ MR G V+ + L+++ + FVR S
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS-- 295
Query: 73 IQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGW 132
Q+ G ++ + + D N L+ + ++G A +VF MK K + ++N++ G
Sbjct: 296 -QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK---DSVSWNSLITGL 351
Query: 133 SKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDT 192
+ + +E + ++M D ++ ++G G + + E+F M E+ D
Sbjct: 352 VQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DN 403
Query: 193 AVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDE 252
+ AMI F+S ++E + ++++ML + PN T++ +++A +++ LQ+
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 253 MLRHGVLPPTGTITCFIKHLCSYGPPFAALVIY 285
+++ ++ + C G A I+
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 120/323 (37%), Gaps = 7/323 (2%)
Query: 13 ALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMR-VNGVEADLLMLSIVVDSFVRAGHVSK 71
L I Y ++ G+ + L M+ V+ + D+ ++++ + G
Sbjct: 174 GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDL 233
Query: 72 AIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM--KGKVAFNVATYNAVA 129
+ ++ LG+ T N ++ + SV M G +V T N++
Sbjct: 234 VKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII 293
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQ 189
G + ++E + GV PD TTF + + G+AG + V M++R
Sbjct: 294 GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFS 353
Query: 190 PDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQM 249
T YN +I F ++ + +M +PN TY ++ A + VV +
Sbjct: 354 LTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
Query: 250 FDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSK 309
+++ V+ T C I G +Y + C + KI + K
Sbjct: 414 LRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKC----KPDKITFATMIK 469
Query: 310 LGKCGTLLNIWEEMQEGGYSSDV 332
+ + +E+++ SSD+
Sbjct: 470 TYTAHGIFDAVQELEKQMISSDI 492
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 156/378 (41%), Gaps = 55/378 (14%)
Query: 14 LPE-DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKA 72
+PE D+ S+ V++K R + +G R++ E D+ + ++ + + G V A
Sbjct: 121 MPERDLVSWNVMIKGYVRNR----NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 73 IQVFGNLNE------------------------LGMNRDTEAL---NVLLKCLCERSHVG 105
VF + E L +R+ AL N LL ++ +
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 106 AASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLE 165
A F+SM + +V ++N + G+++ G+ +E ++ E D T+ +
Sbjct: 237 EARQFFDSMNVR---DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVS 289
Query: 166 GLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP 225
G + ++EA E+F M ERN +NAM+ ++ E M+ E+ D P
Sbjct: 290 GYIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQ----GERMEMAKELF--DVMP 339
Query: 226 --NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALV 283
N+ T+ +IT + K+ +A +FD+M + + I + + G F AL
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS----GHSFEALR 395
Query: 284 IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLC 343
++ + R G ++ ++ L + + + + +GGY + V ++ C
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 344 NIGQLENAVLVMEEALHK 361
G +E A + +E K
Sbjct: 456 KCGSIEEANDLFKEMAGK 473
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
++D+ ++ + S++R G ++A++VF + + + N ++ A
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS----SVSYNGMISGYLRNGEFELARK 116
Query: 110 VFNSMKGKVAFNVATYNAVAGGWSK---FGRFNEIERVMKEMEADGVAPDCTTFGVFLEG 166
+F+ M + ++ ++N + G+ + G+ E+ +M E D ++ L G
Sbjct: 117 LFDEMPER---DLVSWNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSG 166
Query: 167 LGRAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDE-CMKYYNEMLSNDCEP 225
+ G +D+A VF M E+N +NA++ ++ + +E CM + +
Sbjct: 167 YAQNGCVDDARSVFDRMPEKN----DVSWNALLSAYVQNSKMEEACM-----LFKSRENW 217
Query: 226 NLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIK 270
L ++ ++ ++++K+V+A Q FD M V+ IT + +
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
+SKFG +V ++ D F + G + DEA + MK +PD
Sbjct: 162 YSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 192 TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFD 251
+NA+I F + + ++ + M + +P++ ++T II+ L+ + A F
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 252 EMLRHGVLPPTGTITCFI 269
+ML HG+ P + TI +
Sbjct: 278 QMLTHGLYPNSATIITLL 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/359 (18%), Positives = 155/359 (43%), Gaps = 42/359 (11%)
Query: 17 DIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVF 76
DI V++ A R ++ + R+M +G++ D + +V S ++A + + F
Sbjct: 81 DISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD----AFIVPSLLKASR-NLLDREF 135
Query: 77 GNLNE---LGMNRDTEALNV--LLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGG 131
G + L + +++A V L+ + VG A VF+ + + ++ +NA+ G
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ---DLVVFNAMISG 192
Query: 132 WSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPD 191
++ + +E ++K+M+ G+ PD T+ + G ++ E+ M +PD
Sbjct: 193 YANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPD 252
Query: 192 ----TAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIIT-----ALLRRRK 242
T++ + ++ NF + FD + +ML++ PN T ++ A ++ K
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDA----FKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 243 VVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKI 302
+ + + HG + + + G A+++++K + + +
Sbjct: 309 EIHGYSVVTGLEDHGFVR-----SALLDMYGKCGFISEAMILFRKTPKK----TTVTFNS 359
Query: 303 LLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIIS-----GLCNIGQLENAVLVME 356
++ + G + ++++M+ G D + I++ GL ++GQ N L+M+
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ--NLFLLMQ 416
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 134/351 (38%), Gaps = 51/351 (14%)
Query: 40 VLRDMRVNGVEADLLML--------SIVVDS------FVRAGHVSKAIQVFGNLNELGMN 85
+LRD ++G DL+ L I V + FV A +VSKA++++ ++ +
Sbjct: 104 ILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTK 163
Query: 86 RDTEALNVLLKCLCERSHVGAASSVFNSMK-GKVAFNVATYNAVAGGWSKF--------- 135
+ N +L CL + + + +F+ MK + +V TYN + G K
Sbjct: 164 INVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIE 223
Query: 136 ---------------------------GRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
GR E E +++M+ +G +P+ + L
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
G +A E+ MK P+ + ++ +I FD + +E+ S N
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKA 288
Y ++ L + K+ +A +FD+M GV + I LC A + + +
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
Query: 289 RRSGCTISMEAYKILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYII 339
+ + +L + G+ +++ + ++M E S D + +I
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/356 (18%), Positives = 139/356 (39%), Gaps = 12/356 (3%)
Query: 9 VKHPALPEDIGSYRVIVKA-LGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAG 67
+K L D+ +Y ++ + + + + ++ ++ NG++ D +M V+ G
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 68 HVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKG-KVAFNVATYN 126
+A + G + + + LL + A + MK + N
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 127 AVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER 186
+ + K G F+ ++ E+E+ G A + + + ++GL +AG+++EA +F MK +
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 187 NCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEP-----NLDTYTRIITALLRRR 241
+ D + MI F E + LS D E +L ++ A R
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKE-----LSRDSETTYEKCDLVMLNTMLCAYCRAG 426
Query: 242 KVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYK 301
++ ++M +M V P T IK+ A G + E
Sbjct: 427 EMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCS 486
Query: 302 ILLMRLSKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEE 357
L+ L K+ +++ ++ + E++E I+ L L++A +V+++
Sbjct: 487 SLIYHLGKIRAQAEAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKD 542
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 121 NVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVF 180
+V ++N++ G + G N ++ EM V ++ + G R+G++D+A +F
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLF 151
Query: 181 CSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRR 240
M + DTA +N+M+ ++ D+ +K + +M N+ ++T +I L +
Sbjct: 152 YQMPVK----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGK----NVISWTTMICGLDQN 203
Query: 241 RKVVDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPF 279
+ +AL +F MLR + + TC I C+ P F
Sbjct: 204 ERSGEALDLFKNMLRCCIKSTSRPFTCVIT-ACANAPAF 241
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 11/170 (6%)
Query: 59 VVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSM-KGK 117
V+D + ++G+++KA+ VF +NE R+ ++ L H A ++FN M K
Sbjct: 291 VIDMYAKSGNITKALDVFECVNE----RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 118 VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD-GVAPDCTTFGVFLEGLGRAGRMDEA 176
V N T+ A+ S G + +R+ M + G+ P+ +G ++ LGRAG++ EA
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 177 FEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPN 226
EV SM + + A++ +++ +D + + +E++ EPN
Sbjct: 407 DEVIKSMP---FKANAAIWGSLLAASNVHHDLELGERALSELIK--LEPN 451
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 117/310 (37%), Gaps = 37/310 (11%)
Query: 35 SFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVL 94
S + V R + + D V+ VR V Q+ G + G + + L
Sbjct: 98 SIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGL 157
Query: 95 LKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVA 154
++ +G A +F+ M K +V +NA+ G+ K G +E +++ M
Sbjct: 158 IQMYFSCGGLGDARKMFDEMLVK---DVNVWNALLAGYGKVGEMDEARSLLEMMPC--WV 212
Query: 155 PDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYNAM---------------I 199
+ ++ + G ++GR EA EVF M N +PD A+ I
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 200 FNFISVNDFDECMKYYNEMLSN--------------DC--EPNLDTYTRIITALLRRRKV 243
+++ + + N ++ +C E N+ T+T II L
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 244 VDALQMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKAR-RSGCTISMEAYKI 302
+AL MF+ M++ GV P T + G ++ R + G ++E Y
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 303 LLMRLSKLGK 312
++ L + GK
Sbjct: 393 MIDLLGRAGK 402
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 4/181 (2%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
S+ ++ + S + V + M + VE D + L V+ + G + ++ +
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 80 NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFN 139
+ GMNR N ++ + ++ A VF + + NV T+ + G + G
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER---NVVTWTTIIAGLATHGHGA 333
Query: 140 EIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKER-NCQPDTAVYNAM 198
E + M GV P+ TF L G +D +F SM+ + P+ Y M
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 199 I 199
I
Sbjct: 394 I 394
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 11/229 (4%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASS 109
++D L SI+ D +V+ + A ++F E ++R+ L+ + A
Sbjct: 244 QSDYLQASII-DMYVKCRLLDNARKLF----ETSVDRNVVMWTTLISGFAKCERAVEAFD 298
Query: 110 VFNSM-KGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
+F M + + N T A+ S G + V M +G+ D F F++
Sbjct: 299 LFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYA 358
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLD 228
R G + A VF M ERN +++ NA N + F+E + +++M S + PN
Sbjct: 359 RCGNIQMARTVFDMMPERNVISWSSMINAFGINGL----FEEALDCFHKMKSQNVVPNSV 414
Query: 229 TYTRIITALLRRRKVVDALQMFDEMLR-HGVLPPTGTITCFIKHLCSYG 276
T+ +++A V + + F+ M R +GV+P C + L G
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAG 463
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/383 (17%), Positives = 150/383 (39%), Gaps = 16/383 (4%)
Query: 12 PALPEDIGSYRVIVKALGRRKF--FSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHV 69
P + S+ I+ + K +S ++ + MR + D L + + V G +
Sbjct: 66 PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 70 SKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVA 129
I + G + G+++D L++ + + +A VF+ + + N + +
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR---NSVLWGVLM 182
Query: 130 GGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGR--AGRMDEAFEVFCSMKERN 187
G+ K+ + E+ R+ M G+A D T ++ G AG++ + S++
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV-SIRRSF 241
Query: 188 CQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDAL 247
+ ++I ++ D K + + N+ +T +I+ + + V+A
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFE----TSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 248 QMFDEMLRHGVLPPTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRL 307
+F +MLR +LP T+ + S G ++ R+G + + +
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMY 357
Query: 308 SKLGKCGTLLNIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSR 367
++ G +++ M E +V + +I+ G E A+ + + P+
Sbjct: 358 ARCGNIQMARTVFDMMPE----RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 413
Query: 368 LVYSKLINKLLDSNNAERAYKLF 390
+ + L++ S N + +K F
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQF 436
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 142/363 (39%), Gaps = 51/363 (14%)
Query: 50 EADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLC-ERSHVGAAS 108
+ + L+ ++ VR+G + A++VF + ++T N LL + + S + A
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRA----KNTITWNSLLIGISKDPSRMMEAH 113
Query: 109 SVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLG 168
+F+ + F +YN + + + F + + M D ++ + G
Sbjct: 114 QLFDEIPEPDTF---SYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYA 166
Query: 169 RAGRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYN------------ 216
R G M++A E+F SM E+N +NAMI +I D ++ ++
Sbjct: 167 RRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTA 222
Query: 217 --------------EMLSND--CEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLP 260
E + D NL T+ +I+ + + D L++F ML G+ P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 261 PTGTITCFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCGTLLNIW 320
+ ++ + I++ +S + A L+ K G+ G ++
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 321 EEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKLLDS 380
E M++ DV + +ISG G + A+ + E + P + + + LL
Sbjct: 343 EVMKK----KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF---VAVLLAC 395
Query: 381 NNA 383
N+A
Sbjct: 396 NHA 398
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/432 (18%), Positives = 154/432 (35%), Gaps = 69/432 (15%)
Query: 2 VTFFNWAVKHPALPEDIGSYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVD 61
+ FN + L D+ +Y I LG+ ++ V+ MR
Sbjct: 275 LQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMR---------------- 318
Query: 62 SFVRAGHVSKAIQVFGNLNELG----MNRDTEALNVLLKCLCERSHVGAASSVFNSM-KG 116
K ++ NL + + D N +L A S VF + K
Sbjct: 319 --------QKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKN 370
Query: 117 KVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEA 176
+ N ATY + G+F+ + ++M++ G AP T+ V + L R G+++EA
Sbjct: 371 GLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEA 430
Query: 177 FEVFCSMKER------------------------------------NCQPDTAVYNAMIF 200
E M+++ NC+P + +I
Sbjct: 431 VEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIA 490
Query: 201 NFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEML--RHGV 258
++ D+CM + M + C+PN+ T ++ R +A ++F+E++ +
Sbjct: 491 ASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETH 549
Query: 259 LPPTGTITCFIKHLCSYGPPFAALV-IYKKARRSGCTISMEAYKILLMRLSKLGKCGTLL 317
L P F+ + + +Y+ SG + + +L+ S+ GK L
Sbjct: 550 LVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLE 609
Query: 318 NIWEEMQEGGYSSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSKLINKL 377
+ ++ + E G + ++ G + A+ ++ F S ++ L +
Sbjct: 610 HAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEH 669
Query: 378 LDSNNAERAYKL 389
D + +KL
Sbjct: 670 QDWLTQDNLHKL 681
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 146/363 (40%), Gaps = 28/363 (7%)
Query: 20 SYRVIVKALGRRKFFSFMMGVLRDMRVNGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNL 79
+Y ++ R F+ + ++R M +G+E D V+ + AG + QV +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 80 ---NELGMNRDTEALNVLLKCLCERSHVGAASSVFNSMKGKVAFNVATYNAVAGGWSKFG 136
+ + D +++ KC A ++F M K ++ ++NA+ G+ G
Sbjct: 313 LRREDFSFHFDNSLVSLYYKC----GKFDEARAIFEKMPAK---DLVSWNALLSGYVSSG 365
Query: 137 RFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFEVFCSMKERNCQPDTAVYN 196
E + + KEM+ + ++ + + GL G +E ++F MK +P ++
Sbjct: 366 HIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS 421
Query: 197 AMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRH 256
I + + + +Y+ ++L + +L +IT + V +A Q+F M
Sbjct: 422 GAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM--- 478
Query: 257 GVLPPTGTIT--CFIKHLCSYGPPFAALVIYKKARRSGCTISMEAYKILLMRLSKLGKCG 314
P +++ I L +G A+ +Y++ + G +L S G
Sbjct: 479 ---PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVD 535
Query: 315 TLLNIWEEMQEGGY--SSDVEVYEYIISGLCNIGQLENAVLVMEEALHKGFCPSRLVYSK 372
++ M E Y + Y +I LC G+ +A V+E F P+ ++
Sbjct: 536 QGRKYFDSM-ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL---PFKPTAEIWEA 591
Query: 373 LIN 375
L++
Sbjct: 592 LLS 594
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 47/267 (17%)
Query: 47 NGVEADLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGA 106
+G E+D + ++ ++ + G + A +VF +++ RD N ++ R + A
Sbjct: 111 SGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVPVWNAMITGYQRRGDMKA 166
Query: 107 ASSVFNSMKGKVAFNVATYNAVAGGWSKFGRFNEIERVMKEMEAD-----------GVAP 155
A +F+SM K NV ++ V G+S+ G ++E ++ ME D V P
Sbjct: 167 AMELFDSMPRK---NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 156 DCTTFGVF-----LEGLGR--------------------AGRMDEAFEVFCSMKERNCQP 190
C G LEG R G +D A +F +E Q
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLF---EELGNQR 280
Query: 191 DTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMF 250
+ +N+MI + + DE + + +ML +P+ T+ ++ A + VV ++F
Sbjct: 281 NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELF 340
Query: 251 DEMLR-HGVLPPTGTITCFIKHLCSYG 276
M H + P C I L G
Sbjct: 341 KSMEEVHKISPKLEHYGCMIDLLGRVG 367
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 52 DLLMLSIVVDSFVRAGHVSKAIQVFGNLNELGMNRDTEALNVLLKCLCERSHVGAASSVF 111
DL++ + ++ + + G+ AI F N+ G D ++ +L + + V
Sbjct: 238 DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 112 NSMKGK-VAFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRA 170
+ + + + N NA+ ++K G V + + VA C + + L
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC-CNSM---ISCLAIH 353
Query: 171 GRMDEAFEVFCSMKERNCQPDTAVYNAMIFNFISVNDFDECMKYYNEMLSNDCEPNLDTY 230
G+ EA E+F +M+ + +PD + A++ + E +K ++EM + D +PN+ +
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 413
Query: 231 TRIITALLRRRKVVDALQMFDEM 253
+I L R K+ +A ++ EM
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEM 436
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 31/189 (16%)
Query: 119 AFNVATYNAVAGGWSKFGRFNEIERVMKEMEADGVAPDCTTFGVFLEGLGRAGRMDEAFE 178
A ++ +N + G+++ G ++ M+ +G PD T L ++GR+D E
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 179 VFCSMKERNCQPDTAVYNAMI---------------FNFISVNDF--------------- 208
V + R + + V NA+I F ISV
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 209 -DECMKYYNEMLSNDCEPNLDTYTRIITALLRRRKVVDALQMFDEMLRHGVLPPTGTITC 267
E ++ ++ M S D +P+ T+ ++TA + +++ L++F EM V P C
Sbjct: 356 GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGC 415
Query: 268 FIKHLCSYG 276
I L G
Sbjct: 416 LIHLLGRSG 424