Miyakogusa Predicted Gene

Lj6g3v0673260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0673260.1 tr|I0YJN8|I0YJN8_9CHLO Phosphoglycerate
mutase-like protein OS=Coccomyxa subellipsoidea C-169 PE=4
S,31.79,2e-16,seg,NULL; UNKNOWN PROTEIN,NULL; FAMILY NOT NAMED,NULL;
no description,NULL; His_Phos_1,Histidine pho,CUFF.58167.1
         (216 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60450.1 | Symbols:  | Phosphoglycerate mutase family protein...   243   7e-65
AT3G60440.1 | Symbols:  | Phosphoglycerate mutase family protein...   234   3e-62
AT3G60420.1 | Symbols:  | Phosphoglycerate mutase family protein...   224   2e-59
AT3G60420.2 | Symbols:  | Phosphoglycerate mutase family protein...   224   4e-59
AT3G60420.3 | Symbols:  | Phosphoglycerate mutase family protein...   212   2e-55

>AT3G60450.1 | Symbols:  | Phosphoglycerate mutase family protein |
           chr3:22340982-22342187 FORWARD LENGTH=274
          Length = 274

 Score =  243 bits (620), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 117/201 (58%), Positives = 142/201 (70%), Gaps = 1/201 (0%)

Query: 17  YQNVVVMRHGDRIDNFDPSWVSTAPRPWDPPLVQAGKVRAFQTGNRLRQGVGFSINRVFV 76
           YQN+ VMRHGDRIDNF+P WVSTA RPWDPPLVQ G +RAF+TG R+R  +GF I+RVFV
Sbjct: 12  YQNIFVMRHGDRIDNFEPLWVSTAERPWDPPLVQDGMIRAFRTGQRIRSQIGFPIHRVFV 71

Query: 77  SPFLRCVQTXXXXXXXXXXVDEGPVAVTGEGVP-IDPSKVKVSVEYGLSEMMNSEAIRNN 135
           SPFLRC+QT          V+  P A++ + VP ID SK+KVS+E GL EM+NS AIR  
Sbjct: 72  SPFLRCLQTASEVVAALSAVNVDPNAMSSKDVPSIDKSKLKVSIELGLCEMLNSVAIRRE 131

Query: 136 VAPKDGNWGFDVSEREALLPAGTVDSNAEKVYKKLPQWEEPVLETRARYHKTIKELADKY 195
           +APKDG + F VS+ E + P G VD N + VYK+LP+WEE V   R RY K +K LADKY
Sbjct: 132 LAPKDGKFDFTVSDIETMFPEGMVDHNVDMVYKELPKWEESVEGCRDRYVKVVKALADKY 191

Query: 196 PTENLLFVTHGTKIISCLCNF 216
           P ENLL VTHG  + +    F
Sbjct: 192 PEENLLLVTHGEGVGTTFSTF 212


>AT3G60440.1 | Symbols:  | Phosphoglycerate mutase family protein |
           chr3:22337820-22339145 FORWARD LENGTH=291
          Length = 291

 Score =  234 bits (598), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 113/217 (52%), Positives = 145/217 (66%), Gaps = 6/217 (2%)

Query: 1   MDPTGNHNPENKRLVLYQNVVVMRHGDRIDNFDPSWVSTAPRPWDPPLVQAGKVRAFQTG 60
           M+   + NP++     YQN+++MRHGDRID  DP W+ TA RPWDPPLVQ G VRAFQTG
Sbjct: 24  MESAKSKNPDS-----YQNILMMRHGDRIDKIDPLWLDTAARPWDPPLVQDGMVRAFQTG 78

Query: 61  NRLRQGVGFSINRVFVSPFLRCVQTXXXXXXXXXXVDEGPVAVTGEGV-PIDPSKVKVSV 119
            R+R  + F I+RVFVSPF+RC+QT          VD  P A + + V  ID  K+KVS+
Sbjct: 79  QRIRSQIQFPIHRVFVSPFIRCIQTASEVIAALSAVDFDPNATSSKDVTSIDKYKLKVSI 138

Query: 120 EYGLSEMMNSEAIRNNVAPKDGNWGFDVSEREALLPAGTVDSNAEKVYKKLPQWEEPVLE 179
           E+GLSEM+NS AI+  +APKDG + F +SE EA+ P G VD + + VYK++PQWEE V  
Sbjct: 139 EFGLSEMLNSIAIKPEIAPKDGKFDFMISELEAIFPDGMVDHSVDPVYKEMPQWEETVEG 198

Query: 180 TRARYHKTIKELADKYPTENLLFVTHGTKIISCLCNF 216
              R+   IK LADKYP+ENLL VTHG  + +    F
Sbjct: 199 CTDRFLSLIKTLADKYPSENLLLVTHGEGVRTTFATF 235


>AT3G60420.1 | Symbols:  | Phosphoglycerate mutase family protein |
           chr3:22334446-22335710 FORWARD LENGTH=270
          Length = 270

 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/201 (52%), Positives = 142/201 (70%), Gaps = 1/201 (0%)

Query: 17  YQNVVVMRHGDRIDNFDPSWVSTAPRPWDPPLVQAGKVRAFQTGNRLRQGVGFSINRVFV 76
           +QNV++MRHGDR+DNF+P W STA RPWDPPL Q GK RAF+TG R+R  +G  I+RVFV
Sbjct: 11  HQNVILMRHGDRLDNFEPLWTSTAARPWDPPLAQDGKDRAFRTGQRIRSQLGVPIHRVFV 70

Query: 77  SPFLRCVQTXXXXXXXXXXVDEGPVAVTGEGV-PIDPSKVKVSVEYGLSEMMNSEAIRNN 135
           SPFLRC+QT          VD  P+A++ + V  ID +K+KV++E+GLSE+ +   I++ 
Sbjct: 71  SPFLRCIQTASEVVAALSAVDFDPIAMSSKDVLSIDNTKIKVAIEFGLSEIPHPIFIKSE 130

Query: 136 VAPKDGNWGFDVSEREALLPAGTVDSNAEKVYKKLPQWEEPVLETRARYHKTIKELADKY 195
           VAPKDG + F +S+ EA+ P GTVDSN + VYK++P+W E       RY+KT+K LA+KY
Sbjct: 131 VAPKDGKFDFKISDLEAMFPEGTVDSNVDMVYKEVPEWGESAQAFEDRYYKTVKILAEKY 190

Query: 196 PTENLLFVTHGTKIISCLCNF 216
           P+ENLL VTH   +     N+
Sbjct: 191 PSENLLLVTHWGAVSVAFYNY 211


>AT3G60420.2 | Symbols:  | Phosphoglycerate mutase family protein |
           chr3:22334446-22337330 FORWARD LENGTH=350
          Length = 350

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 104/190 (54%), Positives = 139/190 (73%), Gaps = 1/190 (0%)

Query: 17  YQNVVVMRHGDRIDNFDPSWVSTAPRPWDPPLVQAGKVRAFQTGNRLRQGVGFSINRVFV 76
           +QNV++MRHGDR+DNF+P W STA RPWDPPL Q GK RAF+TG R+R  +G  I+RVFV
Sbjct: 11  HQNVILMRHGDRLDNFEPLWTSTAARPWDPPLAQDGKDRAFRTGQRIRSQLGVPIHRVFV 70

Query: 77  SPFLRCVQTXXXXXXXXXXVDEGPVAVTGEGV-PIDPSKVKVSVEYGLSEMMNSEAIRNN 135
           SPFLRC+QT          VD  P+A++ + V  ID +K+KV++E+GLSE+ +   I++ 
Sbjct: 71  SPFLRCIQTASEVVAALSAVDFDPIAMSSKDVLSIDNTKIKVAIEFGLSEIPHPIFIKSE 130

Query: 136 VAPKDGNWGFDVSEREALLPAGTVDSNAEKVYKKLPQWEEPVLETRARYHKTIKELADKY 195
           VAPKDG + F +S+ EA+ P GTVDSN + VYK++P+W E       RY+KT+K LA+KY
Sbjct: 131 VAPKDGKFDFKISDLEAMFPEGTVDSNVDMVYKEVPEWGESAQAFEDRYYKTVKILAEKY 190

Query: 196 PTENLLFVTH 205
           P+ENLL VTH
Sbjct: 191 PSENLLLVTH 200



 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 63/89 (70%)

Query: 117 VSVEYGLSEMMNSEAIRNNVAPKDGNWGFDVSEREALLPAGTVDSNAEKVYKKLPQWEEP 176
           VS+E+GLSEM+NS A +  VAPKDG + F +SE EA+ P G VD N + VYK++PQWEE 
Sbjct: 204 VSIEFGLSEMLNSIAFKPEVAPKDGKFDFKISELEAMFPDGMVDHNVDPVYKEMPQWEET 263

Query: 177 VLETRARYHKTIKELADKYPTENLLFVTH 205
           +     RY   +K LADKYP ENLL VTH
Sbjct: 264 LESCNNRYVNLVKTLADKYPCENLLLVTH 292


>AT3G60420.3 | Symbols:  | Phosphoglycerate mutase family protein |
           chr3:22336113-22337330 FORWARD LENGTH=258
          Length = 258

 Score =  212 bits (539), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/189 (53%), Positives = 124/189 (65%), Gaps = 6/189 (3%)

Query: 17  YQNVVVMRHGDRIDNFDPSWVSTAPRPWDPPLVQAGKVRAFQTGNRLRQGVGFSINRVFV 76
           +Q+V +MRHGDRID F+P WVSTA RPWDPPL+Q G  RAF+TG  +R  + F I+RVFV
Sbjct: 18  HQHVFMMRHGDRIDKFEPQWVSTAARPWDPPLIQGGMFRAFRTGQMIRSQIHFPIHRVFV 77

Query: 77  SPFLRCVQTXXXXXXXXXXVDEGPVAVTGEGVPIDPSKVKVSVEYGLSEMMNSEAIRNNV 136
           SPFLRC+QT           D             D  K+KVS+E+GLSEM+NS A +  V
Sbjct: 78  SPFLRCIQTASEVIAALSDPD------ANSSDSFDKPKLKVSIEFGLSEMLNSIAFKPEV 131

Query: 137 APKDGNWGFDVSEREALLPAGTVDSNAEKVYKKLPQWEEPVLETRARYHKTIKELADKYP 196
           APKDG + F +SE EA+ P G VD N + VYK++PQWEE +     RY   +K LADKYP
Sbjct: 132 APKDGKFDFKISELEAMFPDGMVDHNVDPVYKEMPQWEETLESCNNRYVNLVKTLADKYP 191

Query: 197 TENLLFVTH 205
            ENLL VTH
Sbjct: 192 CENLLLVTH 200