Miyakogusa Predicted Gene
- Lj6g3v0622070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0622070.1 Non Chatacterized Hit- tr|I1N032|I1N032_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.96,0,HELICASE
SKI2W,NULL; seg,NULL; HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HE,CUFF.58098.1
(1257 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46960.1 | Symbols: | RNA helicase, ATP-dependent, SK12/DOB1... 1776 0.0
AT1G59760.1 | Symbols: | RNA helicase, ATP-dependent, SK12/DOB1... 564 e-160
AT1G70070.1 | Symbols: EMB25, PDE317, ISE2 | DEAD/DEAH box helic... 270 6e-72
AT2G06990.1 | Symbols: HEN2 | RNA helicase, ATP-dependent, SK12/... 233 9e-61
AT4G32700.2 | Symbols: | helicases;ATP-dependent helicases;nucl... 85 3e-16
AT1G20960.2 | Symbols: emb1507 | U5 small nuclear ribonucleoprot... 80 9e-15
AT1G20960.1 | Symbols: emb1507 | U5 small nuclear ribonucleoprot... 80 9e-15
AT2G42270.1 | Symbols: | U5 small nuclear ribonucleoprotein hel... 76 1e-13
AT5G61140.1 | Symbols: | U5 small nuclear ribonucleoprotein hel... 72 4e-12
AT5G61140.2 | Symbols: | U5 small nuclear ribonucleoprotein hel... 71 4e-12
AT3G27730.1 | Symbols: RCK, MER3 | ATP binding;ATP-dependent hel... 70 1e-11
>AT3G46960.1 | Symbols: | RNA helicase, ATP-dependent, SK12/DOB1
protein | chr3:17291004-17298067 REVERSE LENGTH=1347
Length = 1347
Score = 1776 bits (4601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 883/1248 (70%), Positives = 1010/1248 (80%), Gaps = 25/1248 (2%)
Query: 28 PIWEPPFRRPVK----GTWEPKFEEVNVSDMTAGAEESGPLPRTSA--KDFVRGSINNRP 81
P WE PFRR + G WEPK EV++S+ G ++SG PR KDF+RGS+NNRP
Sbjct: 107 PTWELPFRRQKEDTENGAWEPKSVEVDLSEQMYGDQDSGFFPRMVGPPKDFLRGSVNNRP 166
Query: 82 FRPGGLDDSQGLERTLPPGASNGEWVLEIFNGGPAQTIPPSSKQGLDLGFLKPYPCSWNV 141
FRPGGL+DSQ ER LP G S+G+WV E+ NGGPAQT+PPS KQ LDLG L PYP +W+V
Sbjct: 167 FRPGGLEDSQSSERVLPEGVSSGQWVQELLNGGPAQTVPPSFKQSLDLGDLMPYPQTWSV 226
Query: 142 YKEANSRQGSSDENLSGLSVQFDDLFKKAWEEDAVGEQEEDGHLSEVVPVKLEAEVD--- 198
Y++ +S +SDEN S LS+QFDDLFKKAWEED E E D H + K EAE D
Sbjct: 227 YEDHSSHGNASDENSSKLSIQFDDLFKKAWEEDTFSELEGDDHTAGSESPKAEAEPDAKA 286
Query: 199 --TTXXXXXXXXXXXXLDDILSADSEG--SKLHLDGFSDEVGQQRKEAWAMYEDSERIAD 254
+ LD+ILS+ S+ + G SD+ Q RKE WA DS+ IAD
Sbjct: 287 SISNEVSKGLETDVTVLDEILSSAKTAIMSEEAVTGSSDK--QLRKEGWATKGDSQDIAD 344
Query: 255 RFHELVPDMALDFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCT 314
RF+ELVPDMA++FPFELD FQKEAI LEKGESVFVAAHTSAGKTVVAEYAFALA+KHCT
Sbjct: 345 RFYELVPDMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCT 404
Query: 315 RAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIR 374
RAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVS+RPEASCLIMTTEILRSMLYRGADIIR
Sbjct: 405 RAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIR 464
Query: 375 DIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWIGRTKQKKI 434
DIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHIN +LLSATVPNT EFADWIGRTKQK+I
Sbjct: 465 DIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEI 524
Query: 435 RLTGTTKRPVPLEHCLFYSGELYKICESETFLPQGLKAAKDASKRRH--LTXXXXXXXXX 492
R+TGTTKRPVPLEHCLFYSGELYK+CE+E FL +G+K AKD+ K+++
Sbjct: 525 RVTGTTKRPVPLEHCLFYSGELYKVCENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMG 584
Query: 493 XXXXHDNARVQKGENTSRVKQHGTNFSRTGKGYQNNGNGQSNW---RAEASMWLMFINKL 549
D ++ QK E SR KQ+ + + +GN Q+N R+ AS WL+ INKL
Sbjct: 585 SSAHQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKL 644
Query: 550 SKKSLLPVIIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQV 609
SK SLLPV++FCFSKN CDR AD++TGTDLTSSSEKSEIR+FCDKAFSRLKGSDRNLPQV
Sbjct: 645 SKMSLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQV 704
Query: 610 VRVQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTL 669
+R+Q+LL RGIGVHHAGLLPIVKEVVEMLFCRGV+KVLFSTETFAMGVNAPARTVVFD L
Sbjct: 705 LRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDAL 764
Query: 670 RKFGGKEFRQLLPGEYTQMAGRAGRRGLDKIGTGILMCRDRDELPEERDLKDVTVGSATH 729
RKF GKEFRQLLPGEYTQMAGRAGRRGLDK GT ++MCRD E+P+E DL+ V VGSAT
Sbjct: 765 RKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRD--EVPDESDLRRVIVGSATR 822
Query: 730 LESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEMQQILKLKLNQPTKAIEC 789
LESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPE QQ+L +K + PTK IEC
Sbjct: 823 LESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIEC 882
Query: 790 IKGEPTIEEYYNLYSEAEKYSNQISEAILQSPNVQPFLNTGRVVIVKSESTQDHLLAVVV 849
IKGEP IE+YY++Y EA +Y+N++SEA++QSP Q FL GRVV++KS D+LL +V+
Sbjct: 883 IKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIVL 942
Query: 850 KTPSQNNKLYIVFMIKPDMPSPVEKASSSGNFQDKSSAFDQGYFVKPKSRRDVEDQYTIS 909
K PS N+ Y+V +IK ++P P + S G KSS QGYF+ PKS+R E+++
Sbjct: 943 KGPSNTNRQYVVLVIKSEIPPPEKNMVSIGK---KSSDPSQGYFIAPKSKRGFEEEFYTK 999
Query: 910 VSARKAKGVINIKLPYRGSACGMSYEVREVDSKEFLCICNRKIKIDQVGLLEDVNKSVYS 969
S+RK VI I+LPY G A G+ YEV+ D+KEFLCIC+ KIKIDQV LLED NK+ +S
Sbjct: 1000 PSSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFS 1059
Query: 970 KTVQLLLDLKSDGNKYPPALDPVKDLKLKDVELVTTYREWTKLLEKMSQNQCHGCIKLEE 1029
+TVQ LLDLKSDGNK+PPALDPVKDLKLKD ELV TY +WT LL+KMS N+CHGC+KLEE
Sbjct: 1060 QTVQQLLDLKSDGNKFPPALDPVKDLKLKDAELVETYYKWTNLLQKMSMNKCHGCVKLEE 1119
Query: 1030 HLKLAKEIKTHKDEVYELQFQMSDGALKQMPDFQGRIDVLKEIGCIDEDLVVQMKGRVAC 1089
H+KLA+EIK HK ++ +L+FQMSD AL QMP FQGRIDVLK IGCID+DLVVQ+KGRVAC
Sbjct: 1120 HMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVAC 1179
Query: 1090 EMNSGEELICTECLFENQLDDLEPEEAVALMSAFVFQQKNTSEPSLTPKLAEARHRLFKT 1149
EMNSGEELICT CLFENQ ++LEPEEAVA+MSAFVFQQKNTS P+LTPKLA+A+ RL+ T
Sbjct: 1180 EMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDT 1239
Query: 1150 AIRLGELQAHFNLPISPEEYAQENLKCGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTI 1209
AIRLGELQA +NL I PEEYAQENLK GLVEVVYEWAKGTPFAEICELTDVPEGLIVRTI
Sbjct: 1240 AIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTI 1299
Query: 1210 VRLDETCREFKNAAAIMGNSALCRKMEIASNAIKRDIVFAASLYVTGV 1257
VRLDETCREFKNAAAIMGNSAL +KM+ ASNAIKRDIVFAASLYVTGV
Sbjct: 1300 VRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYVTGV 1347
>AT1G59760.1 | Symbols: | RNA helicase, ATP-dependent, SK12/DOB1
protein | chr1:21984571-21990110 REVERSE LENGTH=988
Length = 988
Score = 564 bits (1453), Expect = e-160, Method: Compositional matrix adjust.
Identities = 369/1001 (36%), Positives = 532/1001 (53%), Gaps = 83/1001 (8%)
Query: 264 ALDFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIK 323
A DFPF LD+FQ EAI L+ GESV V+AHTSAGKTVVA YA A++ K R +YT+PIK
Sbjct: 61 AKDFPFTLDSFQSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIK 120
Query: 324 TISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFD 382
+SNQKYRDF +F DVGL+TGDV++ P ASCL+MTTEILRSM Y+G++I+R++ W+IFD
Sbjct: 121 ALSNQKYRDFKEEFSDVGLMTGDVTIDPNASCLVMTTEILRSMQYKGSEIMREVAWIIFD 180
Query: 383 EVHYVNDVERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWIGRTKQKKIRLTGTTKR 442
EVHY+ D ERGVVWEE I+M P++ + LSATVPN EFADW+ + Q+ + T R
Sbjct: 181 EVHYMRDSERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYR 240
Query: 443 PVPLEHCLFYSGE--LYKICESETFLPQGLKAAKDASKRRHLTXXXXXXXXXXXXXHDNA 500
P PL+H +F +G LY + + ++ K +D+ ++ + DN
Sbjct: 241 PTPLQHYVFPAGGNGLYLVVDEKS------KFHEDSFQK---SLNALVPTNESDKKRDNG 291
Query: 501 RVQKGENTSRVKQHGTNFSRTGKGYQNNGNGQSNWRAEASMWLMFINKLSKKSLLPVIIF 560
+ QKG ++ + F + + ++ PVI+F
Sbjct: 292 KFQKGLVIGKLGEESDIFK-------------------------LVKMIIQRQYDPVILF 326
Query: 561 CFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLLRRGI 620
FSK C+ A M+ L S EK + A L D+ LPQV + +L+RGI
Sbjct: 327 SFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSNILPILKRGI 386
Query: 621 GVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLRKFGGKEFRQL 680
GVHH+GLLPI+KEV+E+LF G++K LF+TETF++G+N PA+TVVF +RKF G +FR L
Sbjct: 387 GVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWL 446
Query: 681 LPGEYTQMAGRAGRRGLDKIGTGILMCRDRDELPEERDLKDVTVGSATHLESQFRLTYIM 740
GEY QM+GRAGRRG+DK G ILM DE E K + GSA L S F L+Y M
Sbjct: 447 SSGEYIQMSGRAGRRGIDKRGICILMV---DEKMEPAVAKSMLKGSADSLNSAFHLSYNM 503
Query: 741 ILHLLRVEELKVEDMLKRSFAEFHAQKKLPEMQQILKLKLNQPTKAIECIKGEPTIEEYY 800
+L+ LR EE E++L+ SF +F A + +P++++ +K L + ++ I+ E +++ YY
Sbjct: 504 LLNQLRCEEGDPENLLRNSFFQFQADRAIPDLEKQIK-SLEEERDSL-VIEEEESLKNYY 561
Query: 801 NLYSEAEKYSNQISEAILQSPNVQPFLNTGRVVIVKSESTQDHLLAVVVKTPSQNNKLYI 860
NL + + I E + PFL R V + + + + + ++ +
Sbjct: 562 NLILQYKSLKKDIREIVFTPKYCLPFLLPNRAVCLDCTNDDEEPQSFSI----EDQDTWG 617
Query: 861 VFMIKPDMPSPVEKASSSGNFQDKSSAFDQGYFVKPKSRRDVEDQYTISVSARKAKGVIN 920
V M K S D D Y V DV + +S K V
Sbjct: 618 VIM-------KFNKVKSLSEDDDSRRPEDANYTV------DVLTRCMVSKDGVGKKKVKA 664
Query: 921 IKLPYRGSACGMSYEVREVDSKEFLCICNRKIKIDQVGLLEDVNKSVYSKTVQLLLDLKS 980
+ + RG ++ + ++ S L I D V L N K V LL
Sbjct: 665 VPIKERGEPVVVTVPLSQIKS---LSSAIMNIPKDLVPLEARENA---LKKVSELLSRHP 718
Query: 981 DGNKYPPALDPVKDLKLKDVELVTTYREWTKLLEKMSQNQCHGCIKLEEHLK-------L 1033
DG LDP D+K+K T R L +++ + E LK L
Sbjct: 719 DG----IPLDPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEEL 774
Query: 1034 AKEIKTHKDEVYELQFQMSDGALKQMPDFQGRIDVLKEIGCIDEDLVVQMKGRVACEMNS 1093
+IK+ K V S AL + + R VL+ +G I D VV++KG+VACE++S
Sbjct: 775 IAKIKSLKKTVR------SSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISS 828
Query: 1094 GEELICTECLFENQLDDLEPEEAVALMSAFVFQQKNTSEPSLTPKLAEARHRLFKTAIRL 1153
EEL TE +F D + EE V+L+S FV++++ +L +L TA R+
Sbjct: 829 AEELTLTELMFSGIFKDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRV 888
Query: 1154 GELQAHFNLPISPEEYAQENLKCGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLD 1213
E+Q + I E + Q + + ++E VY WAKG+ F E+ E+ V EG ++R I R++
Sbjct: 889 AEVQLDCKVEIDVESFVQ-SFRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRME 947
Query: 1214 ETCREFKNAAAIMGNSALCRKMEIASNAIKRDIVFAASLYV 1254
E ++ AA +G + L K+E A + IKRDIVFAASLY+
Sbjct: 948 EVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFAASLYL 988
>AT1G70070.1 | Symbols: EMB25, PDE317, ISE2 | DEAD/DEAH box
helicase, putative | chr1:26390016-26394148 REVERSE
LENGTH=1171
Length = 1171
Score = 270 bits (690), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 253/500 (50%), Gaps = 51/500 (10%)
Query: 267 FPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTIS 326
+ F +D FQ+ AI +G SV V+A TS+GKT++AE A R YT P+K +S
Sbjct: 151 YDFRIDKFQRLAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVSTVAKGRRLFYTTPLKALS 210
Query: 327 NQKYRDFCGKF---DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADI------IRDIE 377
NQK+R+F F +VGLLTGD ++ +A +IMTTEILR+MLY+ + + ++
Sbjct: 211 NQKFREFRETFGDDNVGLLTGDSAINKDAQIVIMTTEILRNMLYQSVGMASSGTGLFHVD 270
Query: 378 WVIFDEVHYVNDVERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWIGRTKQKKIRLT 437
++ DEVHY++D+ RG VWEE++I P+ + +I LSATV N E A WIG K L
Sbjct: 271 AIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGEI-HGKTELV 329
Query: 438 GTTKRPVPLEHCLFYSGELYKICESETFLPQGLKAAKDASKRRHLTXXXXXXXXXXXXXH 497
+T+RPVPL + + LP L K + R L+
Sbjct: 330 TSTRRPVPLT---------WYFSTKHSLLP--LLDEKGINVNRKLSLNYLQLSASEARFR 378
Query: 498 DNARVQKGENTSRVKQHGTNFSRTG----KGYQNNGNGQSNWRAEA------SMWLMFIN 547
D+ G R K+ G + S Y + N + R ++W
Sbjct: 379 DD---DDGYRKRRSKKRGGDTSYNNLVNVTDYPLSKNEINKIRRSQVPQISDTLW----- 430
Query: 548 KLSKKSLLPVIIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLP 607
L K++LP I F F++ CD + + L EKSE+ L K F L P
Sbjct: 431 HLQGKNMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEKSEVELALKK-FRVL------YP 483
Query: 608 QVVR--VQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVV 665
VR + L RGI HHAG LP+ K +E LF RG+VKV+F+TET A G+N PART V
Sbjct: 484 DAVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAV 543
Query: 666 FDTLRKFGGKEFRQLLPGEYTQMAGRAGRRGLDKIGTGILMCRDRDELPEERDLKDVTVG 725
+L K G E +L P E QMAGRAGRRG+D+ G +L+ + + +
Sbjct: 544 ISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVLV---QTAFEGAEECCKLVFA 600
Query: 726 SATHLESQFRLTYIMILHLL 745
L SQF +Y M+L+L+
Sbjct: 601 GVKPLVSQFTASYGMVLNLV 620
>AT2G06990.1 | Symbols: HEN2 | RNA helicase, ATP-dependent,
SK12/DOB1 protein | chr2:2895135-2900909 FORWARD
LENGTH=995
Length = 995
Score = 233 bits (593), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/194 (55%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 262 DMALDFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAP 321
DMA +PF+LD FQ ++ LE+ ES+ V+AHTSAGKT VAEYA A+A + R +YT+P
Sbjct: 73 DMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 132
Query: 322 IKTISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 380
+K +SNQKYR+ +F DVGL+TGDV+L P ASCL+MTTEILR+MLYRG+++++++ WVI
Sbjct: 133 LKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEVLKEVAWVI 192
Query: 381 FDEVHYVNDVERGVVWEEVIIMLPRHINIILLSATVPNTIEFADWIGRTKQKKIRLTGTT 440
FDE+HY+ D ERGVVWEE II LP I ++ LSAT+ N EFA+WI ++ + T
Sbjct: 193 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPCHVVYTD 252
Query: 441 KRPVPLEHCLFYSG 454
RP PL+H F G
Sbjct: 253 FRPTPLQHYAFPMG 266
Score = 214 bits (545), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 180/299 (60%), Gaps = 9/299 (3%)
Query: 545 FINKLSKKSLLPVIIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDR 604
+ + ++ PVIIF FS+ C++ A SM+ D + EK + + A L DR
Sbjct: 327 IVKMIMERKFEPVIIFSFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQCLNEEDR 386
Query: 605 NLPQVVRVQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTV 664
+LP + + LL+RGI VHH+GLLP++KE+VE+LF G+VK LF+TETFAMG+N PA+TV
Sbjct: 387 SLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 446
Query: 665 VFDTLRKFGGKEFRQLLPGEYTQMAGRAGRRGLDKIGTGILMCRDRDELPEERDLKDVTV 724
VF ++K+ G R + GEY QM+GRAGRRG D+ G I+M DE E L+D+ +
Sbjct: 447 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMI---DEQMEMNTLRDMML 503
Query: 725 GSATHLESQFRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEM-QQILKLKLN 781
G L S FRL+Y IL+LL R E + E +++ SF +F +K LP++ ++ KL
Sbjct: 504 GKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQFQHEKALPDIGNKVSKL--- 560
Query: 782 QPTKAIECIKGEPTIEEYYNLYSEAEKYSNQISEAILQSPNVQPFLNTGRVVIVKSEST 840
+ AI GE + EY+NL + K+ ++ I++ V FL+TGR+V ++ T
Sbjct: 561 EEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPERVLCFLDTGRLVKIREGGT 619
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 168/285 (58%), Gaps = 5/285 (1%)
Query: 974 LLLDLKSDGNKYP---PALDPVKDLKLKDVELVTTYREWTKLLEKMSQNQCHGCIKLEEH 1030
+LL L+ +++P P L PVKD+ ++D E+V + ++ +K+ + H + ++
Sbjct: 712 ILLALQELSSRFPLGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKS-EDDQQ 770
Query: 1031 LKLAKEIKTHKDEVYELQFQMSDGALKQMPD-FQGRIDVLKEIGCIDEDLVVQMKGRVAC 1089
+K + E+ +L+ +M D L++ D + R VLK++G ID D VVQ+KGR AC
Sbjct: 771 IKSFQRKAEVNYEIQQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAAC 830
Query: 1090 EMNSGEELICTECLFENQLDDLEPEEAVALMSAFVFQQKNTSEPSLTPKLAEARHRLFKT 1149
+++G+EL+ TE +F +DL+ + AL S F+ K+ + +L +L + +L +
Sbjct: 831 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDS 890
Query: 1150 AIRLGELQAHFNLPISPEEYAQENLKCGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTI 1209
A ++ E+Q L I EEY + ++ L++V+Y W+KG FAEI ++TD+ EG I+R+
Sbjct: 891 ARKIAEIQHECKLEIDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSA 950
Query: 1210 VRLDETCREFKNAAAIMGNSALCRKMEIASNAIKRDIVFAASLYV 1254
RLDE + + AA +G S+L K AS +++R I+FA SLY+
Sbjct: 951 RRLDEFLNQLRAAAEAVGESSLESKFAAASESLRRGIMFANSLYL 995
>AT4G32700.2 | Symbols: | helicases;ATP-dependent helicases;nucleic
acid binding;ATP binding;DNA-directed DNA
polymerases;DNA binding | chr4:15767440-15779185 FORWARD
LENGTH=2154
Length = 2154
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 557 VIIFCFSKNRCDRSADSMT----GTDLTSSSEKSEIRLFCD--KAFSRLKGSDRNLPQVV 610
V+IFC S+ C+ +A ++ + E SE F D A L+ S + V+
Sbjct: 772 VLIFCSSRKGCESTARHISKLIKNVPVNVDGENSE---FMDIRSAIDALRRSPSGVDPVL 828
Query: 611 RVQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLR 670
+ L G+ HHAGL +E+VE + +G+V+VL +T T A GVN PAR V+F +
Sbjct: 829 --EETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFR--Q 884
Query: 671 KFGGKEFRQLLPGEYTQMAGRAGRRGLDKIGTGILMCR 708
G++F + Y QM+GRAGR G+D G +L+C+
Sbjct: 885 PMIGRDF--IDGTRYKQMSGRAGRTGIDTKGDSVLICK 920
>AT1G20960.2 | Symbols: emb1507 | U5 small nuclear ribonucleoprotein
helicase, putative | chr1:7302591-7309914 REVERSE
LENGTH=2171
Length = 2171
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 557 VIIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSR-LKGSDRNLPQVVRVQNL 615
V+IF S+ ++A ++ T + + + R + + +R + S ++ + ++++
Sbjct: 745 VLIFVHSRKETSKTARAIRDTAMANDTLS---RFLKEDSVTRDVLHSHEDIVKNSDLKDI 801
Query: 616 LRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLRKFGGK 675
L G +HHAGL +E+VE LF +G V+VL ST T A GVN PA TV+ + + +
Sbjct: 802 LPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYNPE 861
Query: 676 E--FRQLLPGEYTQMAGRAGRRGLDKIGTGILMC 707
+ + +L P + QM GRAGR D+ G GI++
Sbjct: 862 KGAWMELSPLDVMQMLGRAGRPQYDQHGEGIIIT 895
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 29/187 (15%)
Query: 286 ESVFVAAHTSAGKTVVAEYAFALASKH-----CTRAVYTAPIKTISNQKYRDFCGKFDVG 340
++V VAA T +GKT+ AE+A L + H R VY AP++ I+ +++R + GKF G
Sbjct: 1367 DNVLVAAPTGSGKTICAEFAI-LRNHHEGPDATMRVVYIAPLEAIAKEQFRIWEGKFGKG 1425
Query: 341 L------LTG----DVSLRPEASCLIMTTEILRSM--LYRGADIIRDIEWVIFDEVHYVN 388
L LTG D+ L + +I T E ++ ++ ++ + I DE+H +
Sbjct: 1426 LGLRVVELTGETALDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIVDELHLIG 1485
Query: 389 DVERGVVWEEVIIMLPRHIN--------IILLSATVPNTIEFADWIGRTKQKKIRLTGTT 440
V+ EVI+ R+I+ I+ LS ++ N + +WIG +
Sbjct: 1486 GQHGPVL--EVIVSRMRYISSQVINKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGV 1543
Query: 441 KRPVPLE 447
RPVPLE
Sbjct: 1544 -RPVPLE 1549
>AT1G20960.1 | Symbols: emb1507 | U5 small nuclear ribonucleoprotein
helicase, putative | chr1:7302591-7309914 REVERSE
LENGTH=2171
Length = 2171
Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 557 VIIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSR-LKGSDRNLPQVVRVQNL 615
V+IF S+ ++A ++ T + + + R + + +R + S ++ + ++++
Sbjct: 745 VLIFVHSRKETSKTARAIRDTAMANDTLS---RFLKEDSVTRDVLHSHEDIVKNSDLKDI 801
Query: 616 LRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLRKFGGK 675
L G +HHAGL +E+VE LF +G V+VL ST T A GVN PA TV+ + + +
Sbjct: 802 LPYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYNPE 861
Query: 676 E--FRQLLPGEYTQMAGRAGRRGLDKIGTGILMC 707
+ + +L P + QM GRAGR D+ G GI++
Sbjct: 862 KGAWMELSPLDVMQMLGRAGRPQYDQHGEGIIIT 895
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 29/187 (15%)
Query: 286 ESVFVAAHTSAGKTVVAEYAFALASKH-----CTRAVYTAPIKTISNQKYRDFCGKFDVG 340
++V VAA T +GKT+ AE+A L + H R VY AP++ I+ +++R + GKF G
Sbjct: 1367 DNVLVAAPTGSGKTICAEFAI-LRNHHEGPDATMRVVYIAPLEAIAKEQFRIWEGKFGKG 1425
Query: 341 L------LTG----DVSLRPEASCLIMTTEILRSM--LYRGADIIRDIEWVIFDEVHYVN 388
L LTG D+ L + +I T E ++ ++ ++ + I DE+H +
Sbjct: 1426 LGLRVVELTGETALDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIVDELHLIG 1485
Query: 389 DVERGVVWEEVIIMLPRHIN--------IILLSATVPNTIEFADWIGRTKQKKIRLTGTT 440
V+ EVI+ R+I+ I+ LS ++ N + +WIG +
Sbjct: 1486 GQHGPVL--EVIVSRMRYISSQVINKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGV 1543
Query: 441 KRPVPLE 447
RPVPLE
Sbjct: 1544 -RPVPLE 1549
>AT2G42270.1 | Symbols: | U5 small nuclear ribonucleoprotein
helicase | chr2:17604330-17610848 FORWARD LENGTH=2172
Length = 2172
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 557 VIIFCFSKNRCDRSADSMTGTDLTSSS------EKSEIRLFCDKAFSRLKGSDRNLPQVV 610
V+IF S+ ++A ++ T + + + E S+ R LK +D
Sbjct: 746 VLIFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQSREILKCLAGLLKNND------- 798
Query: 611 RVQNLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLR 670
++ LL G +HHAGL +E+VE F G ++VL ST T A GVN PA TV+ +
Sbjct: 799 -LKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVIIKGTQ 857
Query: 671 KFGGK--EFRQLLPGEYTQMAGRAGRRGLDKIGTGILM 706
+ + E+ +L P + QM GRAGR D+ G GI++
Sbjct: 858 VYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIII 895
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 31/188 (16%)
Query: 286 ESVFVAAHTSAGKTVVAEYAFALASKH------CTRAVYTAPIKTISNQKYRDFCGKFDV 339
++V VAA T +GKT+ AE FA+ H R VY AP++ I+ +++RD+ KF
Sbjct: 1368 DNVVVAAPTGSGKTICAE--FAILRNHLEGPDSAMRVVYIAPLEAIAKEQFRDWEKKFGK 1425
Query: 340 GL------LTG----DVSLRPEASCLIMTTEILRSM--LYRGADIIRDIEWVIFDEVHYV 387
GL LTG D+ L + +I T E ++ ++ I+ + I DE+H +
Sbjct: 1426 GLGLRVVELTGETLLDLKLLEKGQIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLI 1485
Query: 388 NDVERGVVWEEVIIMLPRHIN--------IILLSATVPNTIEFADWIGRTKQKKIRLTGT 439
V+ EVI+ R+I+ I+ LS ++ N + +WIG +
Sbjct: 1486 GGQGGQVL--EVIVSRMRYISSQVGNKIRIVALSTSLANAKDLGEWIGASSCGVFNFPPN 1543
Query: 440 TKRPVPLE 447
RPVPLE
Sbjct: 1544 V-RPVPLE 1550
>AT5G61140.1 | Symbols: | U5 small nuclear ribonucleoprotein helicase
| chr5:24589999-24603311 FORWARD LENGTH=2146
Length = 2146
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 556 PVIIFCFSKNRCDRSADSMTGTDLTSSSEKSEI-RLFCDKAFSRLKGSDRNLPQV---VR 611
PV+IF S R +T DL + E R F L S+ +L V +
Sbjct: 1575 PVLIFVSS-----RRQTRLTALDLIQFAASDEHPRQF-------LSVSEEDLQMVLSQIT 1622
Query: 612 VQNL---LRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDT 668
QNL L+ GIG+HHAGL + VE LF ++VL ST T A GVN PA V+
Sbjct: 1623 DQNLRHTLQFGIGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKG 1682
Query: 669 LRKFGGKEFRQL-LP-GEYTQMAGRAGRRGLDKIGTGILMCRD 709
F GK R + P E QM GRAGR D+ G +++ +
Sbjct: 1683 TEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHE 1725
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 15/182 (8%)
Query: 558 IIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLLR 617
+IF S+ ++A+ + DL E + LF ++ + + +++ + R ++L++
Sbjct: 749 MIFVHSRKDTSKTAEKLV--DLARQYET--LDLFTNETHPQFQLMKKDVMKS-RNKDLVK 803
Query: 618 ---RGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLRKFGG 674
G G+HHAG+L + + E LF G++KVL T T A GVN PA TVV + +
Sbjct: 804 FFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDA 863
Query: 675 KE--FRQLLPGEYTQMAGRAGRRGLDKIGTGILMCRDRDELPEERDLKDVTVGSATHLES 732
K ++ L + Q+ GRAGR DK G GI++ D+L L + S +ES
Sbjct: 864 KAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIIT-SHDKLAYYLRL----LTSQLPIES 918
Query: 733 QF 734
QF
Sbjct: 919 QF 920
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 287 SVFVAAHTSAGKTVVAEYAFA--LASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGL--- 341
+V V A T +GKT+ AE A +++ + VY AP+K I ++ D+ L
Sbjct: 1362 NVLVGAPTGSGKTISAELAMLRLFSTQPDMKVVYIAPLKAIVRERMNDWKKHLVAPLGKE 1421
Query: 342 ---LTGDVSLRPEASCLIMTTEILR--------SMLYRGADIIRDIEWVIFDEVHYVNDV 390
+TGD + P+ L+ I+ S + ++ + VI DE+H +
Sbjct: 1422 MVEMTGDYT--PDLVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLG-A 1478
Query: 391 ERGVVWEEVIIML-------PRHINIILLSATVPNTIEFADWIGRTKQKKIRLTGTTKRP 443
+RG + E ++ + R + + LS + N + ADW+G + + RP
Sbjct: 1479 DRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSV-RP 1537
Query: 444 VPLE-HCLFYSGELY 457
VP+E H Y G+ Y
Sbjct: 1538 VPIEVHIQGYPGKYY 1552
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 277 EAIYYLEKGESVFVAAHTSAGKTVVA----------EYAFALASKHCTRAVYTAPIKTIS 326
+ +Y+ E++ V A T AGKT +A + K+ + VY AP+K ++
Sbjct: 517 QTVYH--TNENILVCAPTGAGKTNIAMISVLHEIKQHFRDGYLHKNEFKIVYVAPMKALA 574
Query: 327 NQKYRDFCGKFD-----VGLLTGDVSLRP----EASCLIMTTEILRSMLYRGADIIRD-- 375
+ F + V LTGD+ L E ++ T E + + +D+
Sbjct: 575 AEVTSAFSRRLAPLNMVVKELTGDMQLTKTELEETQMIVTTPEKWDVITRKSSDMSMSML 634
Query: 376 IEWVIFDEVHYVNDVERGVVWEEVIIMLPRH-------INIILLSATVPNTIEFADWIGR 428
++ +I DEVH +ND +RG V E ++ R I I+ LSAT+P+ ++ A ++
Sbjct: 635 VKLLIIDEVHLLND-DRGAVIEALVARTLRQVESTQTMIRIVGLSATLPSYLQVAQFLRV 693
Query: 429 TKQKKIRLTGTTKRPVPL 446
+ ++ RPVPL
Sbjct: 694 NTDTGLFYFDSSYRPVPL 711
>AT5G61140.2 | Symbols: | U5 small nuclear ribonucleoprotein helicase
| chr5:24589999-24603311 FORWARD LENGTH=2157
Length = 2157
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 556 PVIIFCFSKNRCDRSADSMTGTDLTSSSEKSEI-RLFCDKAFSRLKGSDRNLPQV---VR 611
PV+IF S R +T DL + E R F L S+ +L V +
Sbjct: 1586 PVLIFVSS-----RRQTRLTALDLIQFAASDEHPRQF-------LSVSEEDLQMVLSQIT 1633
Query: 612 VQNL---LRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDT 668
QNL L+ GIG+HHAGL + VE LF ++VL ST T A GVN PA V+
Sbjct: 1634 DQNLRHTLQFGIGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKG 1693
Query: 669 LRKFGGKEFRQL-LP-GEYTQMAGRAGRRGLDKIGTGILMCRD 709
F GK R + P E QM GRAGR D+ G +++ +
Sbjct: 1694 TEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHE 1736
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 558 IIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLLR 617
+IF S+ ++A+ + DL E + LF ++ + + +++ + R ++L++
Sbjct: 749 MIFVHSRKDTSKTAEKLV--DLARQYET--LDLFTNETHPQFQLMKKDVMKS-RNKDLVK 803
Query: 618 ---RGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLRKFGG 674
G G+HHAG+L + + E LF G++KVL T T A GVN PA TVV + +
Sbjct: 804 FFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDA 863
Query: 675 KE--FRQLLPGEYTQMAGRAGRRGLDKIGTGILMC 707
K ++ L + Q+ GRAGR DK G GI++
Sbjct: 864 KAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIIT 898
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 287 SVFVAAHTSAGKTVVAEYAFA--LASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGL--- 341
+V V A T +GKT+ AE A +++ + VY AP+K I ++ D+ L
Sbjct: 1373 NVLVGAPTGSGKTISAELAMLRLFSTQPDMKVVYIAPLKAIVRERMNDWKKHLVAPLGKE 1432
Query: 342 ---LTGDVSLRPEASCLIMTTEILR--------SMLYRGADIIRDIEWVIFDEVHYVNDV 390
+TGD + P+ L+ I+ S + ++ + VI DE+H +
Sbjct: 1433 MVEMTGDYT--PDLVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLG-A 1489
Query: 391 ERGVVWEEVIIML-------PRHINIILLSATVPNTIEFADWIGRTKQKKIRLTGTTKRP 443
+RG + E ++ + R + + LS + N + ADW+G + + RP
Sbjct: 1490 DRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSV-RP 1548
Query: 444 VPLE-HCLFYSGELY 457
VP+E H Y G+ Y
Sbjct: 1549 VPIEVHIQGYPGKYY 1563
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 277 EAIYYLEKGESVFVAAHTSAGKTVVA----------EYAFALASKHCTRAVYTAPIKTIS 326
+ +Y+ E++ V A T AGKT +A + K+ + VY AP+K ++
Sbjct: 517 QTVYH--TNENILVCAPTGAGKTNIAMISVLHEIKQHFRDGYLHKNEFKIVYVAPMKALA 574
Query: 327 NQKYRDFCGKFD-----VGLLTGDVSLRP----EASCLIMTTEILRSMLYRGADIIRD-- 375
+ F + V LTGD+ L E ++ T E + + +D+
Sbjct: 575 AEVTSAFSRRLAPLNMVVKELTGDMQLTKTELEETQMIVTTPEKWDVITRKSSDMSMSML 634
Query: 376 IEWVIFDEVHYVNDVERGVVWEEVIIMLPRH-------INIILLSATVPNTIEFADWIGR 428
++ +I DEVH +ND +RG V E ++ R I I+ LSAT+P+ ++ A ++
Sbjct: 635 VKLLIIDEVHLLND-DRGAVIEALVARTLRQVESTQTMIRIVGLSATLPSYLQVAQFLRV 693
Query: 429 TKQKKIRLTGTTKRPVPL 446
+ ++ RPVPL
Sbjct: 694 NTDTGLFYFDSSYRPVPL 711
>AT3G27730.1 | Symbols: RCK, MER3 | ATP binding;ATP-dependent
helicases;DNA helicases | chr3:10273952-10280213 REVERSE
LENGTH=1133
Length = 1133
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 557 VIIFCFSKNRCDRSADSMTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVVRVQNLL 616
++FC ++ +A + T +T I+ + RL+ + + ++Q+ +
Sbjct: 277 ALVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIK--SREQLERLREASP-MCSDKQMQSYI 333
Query: 617 RRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDTLRKFGGKE 676
+G+G H+ GL + +VE LF G ++V+ +T T A G+N PA TVV + + F ++
Sbjct: 334 LQGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEK 393
Query: 677 --FRQLLPGEYTQMAGRAGRRGLDKIGTGILMCR 708
+ + QM+GRAGR D G I+M R
Sbjct: 394 GHYMEYDRSTLLQMSGRAGRPPFDDTGMVIIMTR 427
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 43/206 (20%)
Query: 287 SVFVAAHTSAGKTVVAEYAFA-------------LASKHCTRAVYTAPIKTISNQKYRDF 333
++ ++A T +GKTV+ E L +K + VY +P K + +K RD+
Sbjct: 42 NMIISAPTGSGKTVLFELCILRLFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDW 101
Query: 334 CGKFDV-GL----LTGDVSLRP-----EASCLIMTTEILRSM-LYR----GADIIRDIEW 378
KF+ G+ LTGD +A ++ T E ++ YR G DI
Sbjct: 102 NQKFNSWGISCLELTGDNETYSTKNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIAL 161
Query: 379 VIFDEVHYVNDVERGVVWEEVI----IMLPRH---------INIILLSATVPNTIEFADW 425
V+ DEVH +ND RG E ++ I+ H + ++ +SAT+PN + A+W
Sbjct: 162 VLIDEVHLLND-PRGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAEW 220
Query: 426 IGRTKQKKIRLTGTTKRPVPLEHCLF 451
+ + I+ G RPV L +F
Sbjct: 221 L-KVPTAGIKRFGEEMRPVKLTTKVF 245