Miyakogusa Predicted Gene

Lj6g3v0609710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0609710.1 tr|B9GIU6|B9GIU6_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_172390
PE=3,96.91,0,ThiC,Thiamine biosynthesis protein ThiC; THIAMINE
BIOSYNTHESIS PROTEIN THIC,NULL; thiC: thiamine
bio,NODE_6139_length_1701_cov_784.365662.path1.1
         (453 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29630.3 | Symbols: THIC | thiaminC | chr2:12667395-12669569 ...   910   0.0  
AT2G29630.1 | Symbols: PY, THIC | thiaminC | chr2:12667395-12669...   910   0.0  
AT2G29630.2 | Symbols: THIC | thiaminC | chr2:12667395-12669569 ...   910   0.0  

>AT2G29630.3 | Symbols: THIC | thiaminC | chr2:12667395-12669569
           FORWARD LENGTH=644
          Length = 644

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/453 (94%), Positives = 444/453 (98%)

Query: 1   MYFAKQGIITEEMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 60
           MY+AKQGIITEEMLYCA REKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGR FLVKV
Sbjct: 166 MYYAKQGIITEEMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKV 225

Query: 61  NANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPI 120
           NANIGNSAVASSIEEEVYKVQWATMWGADT+MDLSTGRHIHETREWILRNSAVPVGTVPI
Sbjct: 226 NANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPI 285

Query: 121 YQALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGG 180
           YQALEKV+GIAE+L+WEVFR+TLIEQAEQGVDYFTIHAGVLLRYIPLTAKR+TGIVSRGG
Sbjct: 286 YQALEKVDGIAENLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRLTGIVSRGG 345

Query: 181 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 240
           SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ
Sbjct: 346 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 405

Query: 241 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 300
           GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI
Sbjct: 406 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 465

Query: 301 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQEW 360
           TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVK GVIAYKIAAHAADLAK HPHAQ W
Sbjct: 466 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAW 525

Query: 361 DDALSKARFEFRWMDQFALSLDPMTAMSFHDESLPSEGAKVAHFCSMCGPKFCSMKITED 420
           DDALSKARFEFRWMDQFALSLDPMTAMSFHDE+LP++GAKVAHFCSMCGPKFCSMKITED
Sbjct: 526 DDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITED 585

Query: 421 VRKYAEKHGYGTAEEALLRGMDAMSAEFQSAKK 453
           +RKYAE++GYG+AEEA+ +GMDAMS EF  AKK
Sbjct: 586 IRKYAEENGYGSAEEAIRQGMDAMSEEFNIAKK 618


>AT2G29630.1 | Symbols: PY, THIC | thiaminC | chr2:12667395-12669569
           FORWARD LENGTH=644
          Length = 644

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/453 (94%), Positives = 444/453 (98%)

Query: 1   MYFAKQGIITEEMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 60
           MY+AKQGIITEEMLYCA REKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGR FLVKV
Sbjct: 166 MYYAKQGIITEEMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKV 225

Query: 61  NANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPI 120
           NANIGNSAVASSIEEEVYKVQWATMWGADT+MDLSTGRHIHETREWILRNSAVPVGTVPI
Sbjct: 226 NANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPI 285

Query: 121 YQALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGG 180
           YQALEKV+GIAE+L+WEVFR+TLIEQAEQGVDYFTIHAGVLLRYIPLTAKR+TGIVSRGG
Sbjct: 286 YQALEKVDGIAENLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRLTGIVSRGG 345

Query: 181 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 240
           SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ
Sbjct: 346 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 405

Query: 241 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 300
           GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI
Sbjct: 406 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 465

Query: 301 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQEW 360
           TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVK GVIAYKIAAHAADLAK HPHAQ W
Sbjct: 466 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAW 525

Query: 361 DDALSKARFEFRWMDQFALSLDPMTAMSFHDESLPSEGAKVAHFCSMCGPKFCSMKITED 420
           DDALSKARFEFRWMDQFALSLDPMTAMSFHDE+LP++GAKVAHFCSMCGPKFCSMKITED
Sbjct: 526 DDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITED 585

Query: 421 VRKYAEKHGYGTAEEALLRGMDAMSAEFQSAKK 453
           +RKYAE++GYG+AEEA+ +GMDAMS EF  AKK
Sbjct: 586 IRKYAEENGYGSAEEAIRQGMDAMSEEFNIAKK 618


>AT2G29630.2 | Symbols: THIC | thiaminC | chr2:12667395-12669569
           FORWARD LENGTH=644
          Length = 644

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/453 (94%), Positives = 444/453 (98%)

Query: 1   MYFAKQGIITEEMLYCAAREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKV 60
           MY+AKQGIITEEMLYCA REKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGR FLVKV
Sbjct: 166 MYYAKQGIITEEMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKV 225

Query: 61  NANIGNSAVASSIEEEVYKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPI 120
           NANIGNSAVASSIEEEVYKVQWATMWGADT+MDLSTGRHIHETREWILRNSAVPVGTVPI
Sbjct: 226 NANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPI 285

Query: 121 YQALEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGG 180
           YQALEKV+GIAE+L+WEVFR+TLIEQAEQGVDYFTIHAGVLLRYIPLTAKR+TGIVSRGG
Sbjct: 286 YQALEKVDGIAENLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRLTGIVSRGG 345

Query: 181 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 240
           SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ
Sbjct: 346 SIHAKWCLAYHKENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQ 405

Query: 241 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 300
           GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI
Sbjct: 406 GELTRRAWEKDVQVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHI 465

Query: 301 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKTGVIAYKIAAHAADLAKGHPHAQEW 360
           TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVK GVIAYKIAAHAADLAK HPHAQ W
Sbjct: 466 TSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAW 525

Query: 361 DDALSKARFEFRWMDQFALSLDPMTAMSFHDESLPSEGAKVAHFCSMCGPKFCSMKITED 420
           DDALSKARFEFRWMDQFALSLDPMTAMSFHDE+LP++GAKVAHFCSMCGPKFCSMKITED
Sbjct: 526 DDALSKARFEFRWMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITED 585

Query: 421 VRKYAEKHGYGTAEEALLRGMDAMSAEFQSAKK 453
           +RKYAE++GYG+AEEA+ +GMDAMS EF  AKK
Sbjct: 586 IRKYAEENGYGSAEEAIRQGMDAMSEEFNIAKK 618