Miyakogusa Predicted Gene

Lj6g3v0609530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0609530.1 Non Chatacterized Hit- tr|I1J3Y8|I1J3Y8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7653
PE=,81.4,0.0000000006,FtsH protease domain-like,NULL; FTSH
HOMOLOG,NULL; METALLOPROTEASE M41 FTSH,NULL;
Peptidase_M41,Pept,CUFF.58088.1
         (87 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2...   137   1e-33
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1...   112   4e-26

>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
           chr5:23770080-23773719 REVERSE LENGTH=806
          Length = 806

 Score =  137 bits (346), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 64/80 (80%), Positives = 73/80 (91%)

Query: 1   MAYKAIAEYGLNQTIGPVSIATLSSGGIDESGGAPWGRDQGHLVDLVQREVQTLLQSALA 60
           MAYKA+AEYGLN+ IGPVS+ATLS+GGID+SGG+PWGRDQGHLVDLVQREV  LLQSAL 
Sbjct: 684 MAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGHLVDLVQREVTNLLQSALD 743

Query: 61  VALSIIRANTTVLEGLGAYL 80
           VAL+++RAN  VLEGLGA L
Sbjct: 744 VALTVVRANPDVLEGLGAQL 763


>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
           chr3:17332999-17336613 FORWARD LENGTH=802
          Length = 802

 Score =  112 bits (281), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/80 (80%), Positives = 71/80 (88%)

Query: 1   MAYKAIAEYGLNQTIGPVSIATLSSGGIDESGGAPWGRDQGHLVDLVQREVQTLLQSALA 60
           MAYKA+AEYGLNQ IGPVS+ATLS GGID+SGG+PWGRDQG LVDLVQ+EV  LLQSAL 
Sbjct: 680 MAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALD 739

Query: 61  VALSIIRANTTVLEGLGAYL 80
           VALS++RAN  VLEGLGA L
Sbjct: 740 VALSVVRANPDVLEGLGAQL 759