Miyakogusa Predicted Gene

Lj6g3v0528500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0528500.1 CUFF.58013.1
         (324 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65000.1 | Symbols:  | Nucleotide-sugar transporter family pr...   433   e-122
AT5G65000.2 | Symbols:  | Nucleotide-sugar transporter family pr...   303   9e-83

>AT5G65000.1 | Symbols:  | Nucleotide-sugar transporter family
           protein | chr5:25965123-25967307 REVERSE LENGTH=325
          Length = 325

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/308 (75%), Positives = 256/308 (83%)

Query: 16  KILFFSILLAFQYGAQPLIAKRFISRDVIVTSSVLTCEIAKVIFALFIMAKDGSLRRVYK 75
           K+LF+SILL  QYGAQPLI+KR I +DVIVTSSVLTCEI KVI AL +MA++GSL+ + K
Sbjct: 16  KVLFYSILLTLQYGAQPLISKRCIRKDVIVTSSVLTCEIVKVICALILMARNGSLKGLAK 75

Query: 76  EWTLIGALTASGLPAAIYALQNSLLQISYRNLDSLTFSMLNQTKIFFTAFFTYFLLRQKQ 135
           EWTL+G+LTASGLPAAIYALQNSLLQISYR+LDSLTFS+LNQTKIFFTAFFT+ +LRQKQ
Sbjct: 76  EWTLMGSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIILRQKQ 135

Query: 136 SIQQIGXXXXXXXXXXXXSVGEGSSKGSPGSNADQILFYGIXXXXXXXXXXXXXXXXCQW 195
           SI QIG            SVGEGS+K S G NADQ LFYGI                CQW
Sbjct: 136 SILQIGALCLLIMAAVLLSVGEGSNKDSSGINADQKLFYGIIPVLAASVLSGLASSLCQW 195

Query: 196 ASQVKKHSSYLMTIEMSIVGSLCLLASTLKSPDGEAMRLRGFFYGWTPLTLVPVISNALG 255
           ASQVKKHSSYLMT+EMSIVGSLCLL STLKSPDGEA++  GFF+GWT LTLVPVISNALG
Sbjct: 196 ASQVKKHSSYLMTVEMSIVGSLCLLVSTLKSPDGEAIKKYGFFHGWTALTLVPVISNALG 255

Query: 256 GILVGLVTSYAGGVRKGFVIVSALLVTALLQFIFEGKPPSLYCLAALPLVVSSISVYQKY 315
           GILVGLVTS+AGGVRKGFVIVSALLVTALLQF FEGKPPS YCL ALPLV+SSIS+YQKY
Sbjct: 256 GILVGLVTSHAGGVRKGFVIVSALLVTALLQFAFEGKPPSSYCLVALPLVMSSISMYQKY 315

Query: 316 PYRVKKKE 323
           PY  KKK+
Sbjct: 316 PYIDKKKK 323


>AT5G65000.2 | Symbols:  | Nucleotide-sugar transporter family
           protein | chr5:25965496-25967307 REVERSE LENGTH=260
          Length = 260

 Score =  303 bits (777), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 165/232 (71%), Positives = 185/232 (79%)

Query: 16  KILFFSILLAFQYGAQPLIAKRFISRDVIVTSSVLTCEIAKVIFALFIMAKDGSLRRVYK 75
           K+LF+SILL  QYGAQPLI+KR I +DVIVTSSVLTCEI KVI AL +MA++GSL+ + K
Sbjct: 16  KVLFYSILLTLQYGAQPLISKRCIRKDVIVTSSVLTCEIVKVICALILMARNGSLKGLAK 75

Query: 76  EWTLIGALTASGLPAAIYALQNSLLQISYRNLDSLTFSMLNQTKIFFTAFFTYFLLRQKQ 135
           EWTL+G+LTASGLPAAIYALQNSLLQISYR+LDSLTFS+LNQTKIFFTAFFT+ +LRQKQ
Sbjct: 76  EWTLMGSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIILRQKQ 135

Query: 136 SIQQIGXXXXXXXXXXXXSVGEGSSKGSPGSNADQILFYGIXXXXXXXXXXXXXXXXCQW 195
           SI QIG            SVGEGS+K S G NADQ LFYGI                CQW
Sbjct: 136 SILQIGALCLLIMAAVLLSVGEGSNKDSSGINADQKLFYGIIPVLAASVLSGLASSLCQW 195

Query: 196 ASQVKKHSSYLMTIEMSIVGSLCLLASTLKSPDGEAMRLRGFFYGWTPLTLV 247
           ASQVKKHSSYLMT+EMSIVGSLCLL STLKSPDGEA++  GFF+GWT LTLV
Sbjct: 196 ASQVKKHSSYLMTVEMSIVGSLCLLVSTLKSPDGEAIKKYGFFHGWTALTLV 247