Miyakogusa Predicted Gene

Lj6g3v0485150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0485150.1 Non Chatacterized Hit- tr|C5X1H6|C5X1H6_SORBI
Putative uncharacterized protein Sb01g021660
OS=Sorghu,33.45,9e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; seg,NULL; IQD (IQ-DOMAIN), CALMODULIN
BIN,CUFF.57898.1
         (318 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16490.1 | Symbols: IQD26 | IQ-domain 26 | chr3:5603962-56054...   194   8e-50
AT4G29150.1 | Symbols: IQD25 | IQ-domain 25 | chr4:14378770-1438...   139   3e-33
AT1G51960.1 | Symbols: IQD27 | IQ-domain 27 | chr1:19310355-1931...   116   2e-26
AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470449-84719...    85   8e-17
AT4G23060.1 | Symbols: IQD22 | IQ-domain 22 | chr4:12087283-1209...    62   4e-10
AT5G07240.1 | Symbols: IQD24 | IQ-domain 24 | chr5:2272028-22740...    61   1e-09
AT1G01110.1 | Symbols: IQD18 | IQ-domain 18 | chr1:53022-54494 F...    58   1e-08
AT1G01110.2 | Symbols: IQD18 | IQ-domain 18 | chr1:52239-54494 F...    57   2e-08
AT3G52290.1 | Symbols: IQD3 | IQ-domain 3 | chr3:19394441-193961...    50   2e-06
AT4G00820.1 | Symbols: iqd17 | IQ-domain 17 | chr4:349300-351307...    49   7e-06

>AT3G16490.1 | Symbols: IQD26 | IQ-domain 26 | chr3:5603962-5605489
           REVERSE LENGTH=389
          Length = 389

 Score =  194 bits (492), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/287 (44%), Positives = 170/287 (59%), Gaps = 42/287 (14%)

Query: 3   GGGHQRLAAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALIRA 62
           G   +R AAVKIQ+VF                  QALVRGYLVRK A  TLHSMQALIRA
Sbjct: 102 GNAMERWAAVKIQSVFKGYLARKALRALKGLVKLQALVRGYLVRKRAAETLHSMQALIRA 161

Query: 63  QAMVRSQKSRGLMSSKNEAYRTQTLARRSMEKFDDYRSEHTAPIHSRRLSSSFD----NT 118
           Q  VRSQ+      ++N  +      R S+E+ DD RSE    IHS+R+S S +    + 
Sbjct: 162 QTSVRSQR-----INRNNMFH----PRHSLERLDDSRSE----IHSKRISISVEKQSNHN 208

Query: 119 NNSVD-GSPKIVEVDNGSRPKSRSRRSNTSISDFGEDPSFHSPLPFTIRTPAPSDNRNFH 177
           NN+ D  SPKIVE+D   + KSRS+R N ++S+ G+D  + +              ++F 
Sbjct: 209 NNAYDETSPKIVEIDT-YKTKSRSKRMNVAVSECGDDFIYQA--------------KDF- 252

Query: 178 DSSEWGLTREECRFSTAQSTPRFTSSCSCGGSVAAPLTP-KTVCTENLFIGQY-GNNFPN 235
              EW    E+C+F TAQ+TPRF+SS +       P +P K+VC +  F   Y G   P+
Sbjct: 253 ---EWSFPGEKCKFPTAQNTPRFSSSMANNNYYYTPPSPAKSVCRDACFRPSYPGLMTPS 309

Query: 236 YMASTKSFKAKLRSHSAPKQRPEPGPKKRLSLTDLMESRSSFSGVRM 282
           YMA+T+SFKAK+RSHSAP+QRP+   +KRLSL ++M +RSS SGVRM
Sbjct: 310 YMANTQSFKAKVRSHSAPRQRPD---RKRLSLDEIMAARSSVSGVRM 353


>AT4G29150.1 | Symbols: IQD25 | IQ-domain 25 |
           chr4:14378770-14380340 FORWARD LENGTH=399
          Length = 399

 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 151/313 (48%), Gaps = 68/313 (21%)

Query: 2   FGGGHQR--LAAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQAL 59
            GGG  R   AA++IQ  F                  QALVRG+LVR +A ATL SM+AL
Sbjct: 123 LGGGKSREHRAAMQIQCAFRGYLARKALRALRGVVKIQALVRGFLVRNQAAATLRSMEAL 182

Query: 60  IRAQAMVRSQKSRGLMSSKNEAYRTQTLARRSMEKFDDYRSEHTAPIHSRRLSSSFDNTN 119
           +RAQ  V+ Q  R L  + N A      AR+S E+F                S S +N N
Sbjct: 183 VRAQKTVKIQ--RALRRNGNAAP-----ARKSTERF----------------SGSLENRN 219

Query: 120 NSVDGSPKIVEVDNGSRPKS-RSRRSNTSISDFGEDP---SFHSPL----PFTIRTPAPS 171
           N  + + KIVEVD G+RP + R R    S SDF ++P   +  SPL    P  +  P P 
Sbjct: 220 NGEE-TAKIVEVDTGTRPGTYRIRAPVLSGSDFLDNPFRRTLSSPLSGRVPPRLSMPKP- 277

Query: 172 DNRNFHDSSEWGLTREEC--RFSTAQSTPRFT------SSCSCGGSVAAPLTPKTVCTEN 223
                    EW    EEC  +F TAQSTPRF+      S C  GG V A +   T    N
Sbjct: 278 ---------EW----EECSSKFPTAQSTPRFSGGSPARSVCCSGGGVEAEV--DTEADAN 322

Query: 224 LFIGQYGNNFPNYMASTKSFKAKLRSHSAPKQRPEPGPKKRLSLTDLMESRSSF--SGVR 281
            F    G     YMA T SF+AKLRSHSAP+QRPE       S       R S    GVR
Sbjct: 323 RFCFLSGEFNSGYMADTTSFRAKLRSHSAPRQRPE-------SNASAGGWRRSIGGGGVR 375

Query: 282 MQR-SCSQIQEAI 293
           MQR SCS ++EA+
Sbjct: 376 MQRQSCSGVREAV 388


>AT1G51960.1 | Symbols: IQD27 | IQ-domain 27 |
           chr1:19310355-19311683 FORWARD LENGTH=351
          Length = 351

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 136/283 (48%), Gaps = 52/283 (18%)

Query: 7   QRLAAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALIRAQAMV 66
           +R AAVKIQ VF                  QALVRGYLVRK A A L S+Q LIR Q  +
Sbjct: 99  ERWAAVKIQKVFRGSLARKALRALKGIVKLQALVRGYLVRKRAAAMLQSIQTLIRVQTAM 158

Query: 67  RSQKSRGLMSSKNEAYRTQTLARRSMEKFDDYRSEHTAPIHSRRLSSSFDNTNNSVDGSP 126
           RS++   +  S N+ Y      R+S +KFD+               ++FD      D   
Sbjct: 159 RSKR---INRSLNKEYNNMFQPRQSFDKFDE---------------ATFD------DRRT 194

Query: 127 KIVEVDN------GSRPKSRSRRSNTSISDFGEDPSFHSPLPFTIRTPAPSDNRNFHDSS 180
           KIVE D+       SR +SR   +  S+SD+  D  +                    +  
Sbjct: 195 KIVEKDDRYMRRSSSRSRSRQVHNVVSMSDYEGDFVYKG------------------NDL 236

Query: 181 EWGLTREECRFSTAQSTPRFTSSCSCGGSVAAPLTP-KTVCTENLFIGQYGNNFPNYMAS 239
           E   + E+ +F+TAQ+TPR     S         +P K+V  + L   +   + P YM  
Sbjct: 237 ELCFSDEKWKFATAQNTPRLLHHHSANNRYYVMQSPAKSVGGKALCDYESSVSTPGYMEK 296

Query: 240 TKSFKAKLRSHSAPKQRPEPGPKKRLSLTDLMESRSSFSGVRM 282
           TKSFKAK+RSHSAP+QR E   ++RLSL ++M S+SS SGV M
Sbjct: 297 TKSFKAKVRSHSAPRQRSE---RQRLSLDEVMASKSSVSGVSM 336


>AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470449-8471903
           FORWARD LENGTH=387
          Length = 387

 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 125/293 (42%), Gaps = 80/293 (27%)

Query: 7   QRLAAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALIRAQAMV 66
           +  AA+KIQ  +                  QALVRG+LVRK+ATATL  MQALI  QA  
Sbjct: 104 EEFAAIKIQACYRSHLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALITLQAKA 163

Query: 67  RSQKSRGLMSSKNEAYRTQTLARRSMEKFDDYRSEHTAPIHSRRLSSSFDNTNNSVDGSP 126
           R Q+ R ++   +   RT                     IH  R+++ +     ++    
Sbjct: 164 REQRIR-MIGGDSTNPRTS--------------------IHKTRINNFYHENEENI---- 198

Query: 127 KIVEVDNGSRPKSRSRRSNTSISDFGEDPSFHSPLPFTIRTPAP-SDNRNFHDSSEWGLT 185
           KIVE+D  S+                     +SP P  +   +P + + +F D +     
Sbjct: 199 KIVEMDIQSK--------------------MYSPAPSALTEMSPRAYSSHFEDCNS---- 234

Query: 186 REECRFSTAQSTPRFTSSCSCGGSVAAPLTPKTVCTENLFIGQYGNNFPNYMASTKSFKA 245
                F+TAQS+P+      C           T+ + +  +      FPNYMA+T+S KA
Sbjct: 235 -----FNTAQSSPQ------CFSRFKEYYNGDTLSSYDYPL------FPNYMANTQSSKA 277

Query: 246 KLRSHSAPKQRPEPGPKKRLSLTDLMESRSSFS---------GVRMQRSCSQI 289
           K RS SAPKQRP    +K++S       RSS            VRMQRS SQ+
Sbjct: 278 KARSQSAPKQRPPEIYEKQMS----GRRRSSMEAPRNNGVPRAVRMQRSSSQL 326


>AT4G23060.1 | Symbols: IQD22 | IQ-domain 22 |
           chr4:12087283-12090408 FORWARD LENGTH=484
          Length = 484

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 132/306 (43%), Gaps = 63/306 (20%)

Query: 5   GHQR----LAAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALI 60
           GH R    LA +KIQ++F                  QA+VRG++ RK  +  L  M AL+
Sbjct: 160 GHGRDSCELAVIKIQSIFRGYLAKRALRALKGLVRLQAIVRGHIERKRMSVHLRRMHALV 219

Query: 61  RAQAMVRSQK------SRGLMSSKNEAYRTQTLARRSMEKFD---DYRSEHTAPIH---- 107
           RAQA VR+ +      S    S+  ++   Q     + EK +     RS   A  H    
Sbjct: 220 RAQARVRATRVIVTPESSSSQSNNTKSSHFQNPGPPTPEKLEHSISSRSSKLAHSHLFKR 279

Query: 108 -------SRRLSSSFDNTNNSVDGSPKIVEVDNGSRPKSRSRR--------SNTSISDFG 152
                  + RL  +   T ++ D   KI+++D      S +RR        S+  + + G
Sbjct: 280 NGSKASDNNRLYPAHRETFSATDEEEKILQIDR-KHISSYTRRNRPDMFYSSHLILDNAG 338

Query: 153 -EDPSFHSPLPFTIRTPAPSDNRNFHDSSEWGLTREECRFSTAQSTPRFTSSCS---CGG 208
             +P F +P        +PS       SS   +T + C   TA+++P+  S+ S      
Sbjct: 339 LSEPVFATPF-------SPS-------SSHEEITSQFC---TAENSPQLYSATSRSKRSA 381

Query: 209 SVAAPLTPKTVCTENLFIGQYGNNFPNYMASTKSFKAKLRSHSAPKQRP----EPGPKKR 264
             A+ + P + CT++   G +    P+YMA T+S +AK RS SAPK RP    E    KR
Sbjct: 382 FTASSIAP-SDCTKSCCDGDH----PSYMACTESSRAKARSASAPKSRPQLFYERPSSKR 436

Query: 265 LSLTDL 270
               DL
Sbjct: 437 FGFVDL 442


>AT5G07240.1 | Symbols: IQD24 | IQ-domain 24 | chr5:2272028-2274051
           FORWARD LENGTH=401
          Length = 401

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 49/265 (18%)

Query: 10  AAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALIRAQAMVRSQ 69
           AA+KIQ+ F                  QALV+G++VRK+    L  MQ L+R QA  R+ 
Sbjct: 108 AAMKIQSAFRGYLARRALRALKALVKLQALVKGHIVRKQTADMLRRMQTLVRLQARARAS 167

Query: 70  KSRG----------LMSSKNEAYRTQTLARRSMEK---FDDYRSEHTAPIHSRRLSSSFD 116
           +S            ++ S  +++  + ++     K    D + + H +P+ S RL   + 
Sbjct: 168 RSSHVSDSSHPPTLMIPSSPQSFHARCVSEAEYSKVIAMDHHHNNHRSPMGSSRLLDQW- 226

Query: 117 NTNNSVDGSPKIVEVDNGSRPKSRSRRSNTSISDFGEDPSFHSPLPFTIRTPAPSDNRNF 176
            T  S+  +PK  E D+      +    +T    F E P     L               
Sbjct: 227 RTEESLWSAPKYNEDDD------KILEVDTWKPHFRESPRKRGSLVVP------------ 268

Query: 177 HDSSEWGLTREECRFSTAQSTPRFTSSCSCGGSVAAPLTPKTVCTENLFIGQYGNNFPNY 236
                          ++ +++P+  S        +   TP T          Y    PNY
Sbjct: 269 ---------------TSVENSPQLRSRTGSSSGGSRRKTPFTPARSE--YEYYSGYHPNY 311

Query: 237 MASTKSFKAKLRSHSAPKQRPEPGP 261
           MA+T+S+KAK+RS SAP+QR +  P
Sbjct: 312 MANTESYKAKVRSQSAPRQRLQDLP 336


>AT1G01110.1 | Symbols: IQD18 | IQ-domain 18 | chr1:53022-54494
           FORWARD LENGTH=364
          Length = 364

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 104/250 (41%), Gaps = 49/250 (19%)

Query: 40  VRGYLVRKEATATLHSMQALIRA--QAMVRS---QKSRGLMSSKNEAYRTQTLARRSMEK 94
           V+  L R+  TA  H    L +A  Q M R+   Q + G    + E  R + L R    +
Sbjct: 75  VKVMLQRRRDTALRHDKTNLSQAFSQKMWRTVGNQSTEGHHEVELEEERPKWLDRWMATR 134

Query: 95  FDDYRSEHTAPIHSRRLSSSFDNTNNSVDGSPKIVEVDN--------------GSRPKSR 140
             D R+   A +  R               S K VE+D               G RP S 
Sbjct: 135 PWDKRASSRASVDQR--------------VSVKTVEIDTSQPYSRTGAGSPSRGQRPSSP 180

Query: 141 SRRSN--TSISDFGEDPSFHSPLPFTIRTPAPSDNRNFHDSSEWGLTREECRFSTAQSTP 198
           SR S+   S ++F   PS     P  IR+ +P   R+  +       R+   +S   +TP
Sbjct: 181 SRTSHHYQSRNNFSATPSPAKSRPILIRSASPRCQRDPRED------RDRAAYSYTSNTP 234

Query: 199 RFTSSCSCGGSVAAPLTPKTVCTENLFIGQYGNNFPNYMASTKSFKAKLRSHSAPKQRPE 258
              S+ S         T ++ C+ +  +    +  PNYMAST+S KA++RSHSAP+QRP 
Sbjct: 235 SLRSNYS--------FTARSGCSISTTMVNNASLLPNYMASTESAKARIRSHSAPRQRPS 286

Query: 259 PGPKKRLSLT 268
              + R  L 
Sbjct: 287 TPERDRAGLV 296


>AT1G01110.2 | Symbols: IQD18 | IQ-domain 18 | chr1:52239-54494
           FORWARD LENGTH=527
          Length = 527

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 104/250 (41%), Gaps = 49/250 (19%)

Query: 40  VRGYLVRKEATATLHSMQALIRA--QAMVRS---QKSRGLMSSKNEAYRTQTLARRSMEK 94
           V+  L R+  TA  H    L +A  Q M R+   Q + G    + E  R + L R    +
Sbjct: 238 VKVMLQRRRDTALRHDKTNLSQAFSQKMWRTVGNQSTEGHHEVELEEERPKWLDRWMATR 297

Query: 95  FDDYRSEHTAPIHSRRLSSSFDNTNNSVDGSPKIVEVDN--------------GSRPKSR 140
             D R+   A +  R               S K VE+D               G RP S 
Sbjct: 298 PWDKRASSRASVDQR--------------VSVKTVEIDTSQPYSRTGAGSPSRGQRPSSP 343

Query: 141 SRRSN--TSISDFGEDPSFHSPLPFTIRTPAPSDNRNFHDSSEWGLTREECRFSTAQSTP 198
           SR S+   S ++F   PS     P  IR+ +P   R+  +       R+   +S   +TP
Sbjct: 344 SRTSHHYQSRNNFSATPSPAKSRPILIRSASPRCQRDPRED------RDRAAYSYTSNTP 397

Query: 199 RFTSSCSCGGSVAAPLTPKTVCTENLFIGQYGNNFPNYMASTKSFKAKLRSHSAPKQRPE 258
              S+ S         T ++ C+ +  +    +  PNYMAST+S KA++RSHSAP+QRP 
Sbjct: 398 SLRSNYS--------FTARSGCSISTTMVNNASLLPNYMASTESAKARIRSHSAPRQRPS 449

Query: 259 PGPKKRLSLT 268
              + R  L 
Sbjct: 450 TPERDRAGLV 459


>AT3G52290.1 | Symbols: IQD3 | IQ-domain 3 | chr3:19394441-19396196
           FORWARD LENGTH=430
          Length = 430

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 3   GGGHQRLAAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALIRA 62
           G   + +AA+KIQT F                  ++LV+G  VR++AT+TL SMQ L R 
Sbjct: 103 GKSMEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQTLARV 162

Query: 63  QAMVRSQKSRGLMSSKNEAYRTQTLARRSMEKFD 96
           Q  +R    R L  S+++   T+ L ++  + FD
Sbjct: 163 QYQIR---ERRLRLSEDKQALTRQLQQKHNKDFD 193


>AT4G00820.1 | Symbols: iqd17 | IQ-domain 17 | chr4:349300-351307
           FORWARD LENGTH=534
          Length = 534

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 33/63 (52%)

Query: 10  AAVKIQTVFXXXXXXXXXXXXXXXXXXQALVRGYLVRKEATATLHSMQALIRAQAMVRSQ 69
           AAV IQT F                  QALVRG+ VRK+A  TL  MQAL+R Q+ V  Q
Sbjct: 134 AAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDQ 193

Query: 70  KSR 72
           + R
Sbjct: 194 RKR 196