Miyakogusa Predicted Gene
- Lj6g3v0468630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0468630.1 Non Chatacterized Hit- tr|C0JP34|C0JP34_LOTJA
Putative basic helix-loop-helix protein BHLH26
(Fragme,100,0,HLH,Helix-loop-helix domain; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; HLH, helix-loop-helix ,gene.g64278.t1.1
(314 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 246 1e-65
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 243 2e-64
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 185 3e-47
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 176 2e-44
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 171 7e-43
AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 171 7e-43
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 166 3e-41
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 161 5e-40
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 161 5e-40
AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-... 119 3e-27
AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH) DNA-... 96 4e-20
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 56 3e-08
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 56 3e-08
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 55 4e-08
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 55 4e-08
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 55 4e-08
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 5e-08
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 7e-08
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 55 9e-08
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 2e-07
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 52 4e-07
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 51 1e-06
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 48 8e-06
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 202/344 (58%), Gaps = 68/344 (19%)
Query: 9 MALEAVVYDPQAQDPFGY------GFKDLY---------------------------NCN 35
MALEAVVY QDPF Y F DLY + N
Sbjct: 1 MALEAVVY---PQDPFSYISCKDFPFYDLYFQEEEDQDPQDTKNNIKLGQGQGHGFASNN 57
Query: 36 FLADTTNWGYEKLNLEKDDKQIENYPYGDWSSSTTSSMLPHMNELQETTDPSNTSNFXXX 95
+ T ++ + E+D + + PYG S+ T S P PS+ +
Sbjct: 58 YNGRTGDYSDDYNYNEEDLQWPRDLPYG--SAVDTESQPP----------PSDVAA-GGG 104
Query: 96 XXXXXXXXXXXNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIG 155
NKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP Y QRGDQASI+G
Sbjct: 105 RRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVG 164
Query: 156 GAINFVRELEQRLQFL----GAKKESEG----KSENEAATASMPFSEFFSFPQYSTSASG 207
GAIN+++ELE LQ + E G +++ +A++S PFS+FF+FPQYS +
Sbjct: 165 GAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPT- 223
Query: 208 CDDSAAIGEHVGGVQSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHM 267
SAA E G+A+IEVTMVESHA+LKI +KKRP+QLLK+V+ + ++RLT+LH+
Sbjct: 224 ---SAAAAE-------GMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHL 273
Query: 268 NVTTTGEIVLYCLSVKVEEDCKLGSVDDIAAAVYQMLDRIHQEA 311
NVTT + VLY +SVKVEE +L +V+DIAAAV Q+L RI +E+
Sbjct: 274 NVTTRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEES 317
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 195/323 (60%), Gaps = 39/323 (12%)
Query: 9 MALEAVVYDPQAQDPFGY-------GFKDLYNCN-FLADTTNWGYEKLNLEK-------- 52
M LEAVVY QDPFGY F DLY+ F+A T +KL E+
Sbjct: 1 MPLEAVVY---PQDPFGYLSNCKDFMFHDLYSQEEFVAQDTKNNIDKLGHEQSFVEQGKE 57
Query: 53 DDKQIENYPYGDWSSSTTSSMLPHMNE-LQETTDPSNTSNFXXXXXXXXXXXXXXNKEEI 111
DD Q +Y ++P + E L T + NKEEI
Sbjct: 58 DDHQWRDY-------HQYPLLIPSLGEELGLTAIDVESHPPPQHRRKRRRTRNCKNKEEI 110
Query: 112 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFL 171
ENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+V+ELE LQ +
Sbjct: 111 ENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSM 170
Query: 172 GAKK-ESEGKSENEAATASM--PFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADI 228
K+ + ++ +T+S+ PF++FFSFPQYST +S ++ A+I
Sbjct: 171 EPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSP---------AEI 221
Query: 229 EVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDC 288
EVT+ ESHAN+KI +KK+P+QLLK++T L ++RLT+LH+NVTT +LY +SV+VEE
Sbjct: 222 EVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGS 281
Query: 289 KLGSVDDIAAAVYQMLDRIHQEA 311
+L +VDDIA A+ Q + RI +E
Sbjct: 282 QLNTVDDIATALNQTIRRIQEET 304
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:621334-622697 FORWARD
LENGTH=315
Length = 315
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 141/206 (68%), Gaps = 3/206 (1%)
Query: 107 NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 166
NK+E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F++ELEQ
Sbjct: 106 NKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQ 165
Query: 167 RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 226
LQ L A+K +G E TAS S + S S+ GG
Sbjct: 166 LLQSLEAEKRKDGTDET-PKTASCSSSSSLACTNSSISSVSTTSENGFTARFGG--GDTT 222
Query: 227 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEE 286
++E T++++H +LK+R K+ +Q+LK + + ++L ILH+ ++++ + V+Y ++K+E+
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282
Query: 287 DCKLGSVDDIAAAVYQMLDRIHQEAM 312
CKLGS D+IA AV+Q+ ++I+ E M
Sbjct: 283 GCKLGSADEIATAVHQIFEQINGEVM 308
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 146/231 (63%), Gaps = 34/231 (14%)
Query: 107 NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 166
N+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP+ + +GDQASI+GGAI+F++ELE
Sbjct: 79 NEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEH 138
Query: 167 RLQFLGAKK----------------ESEGKSENEAATASMPFSEFFSFPQYSTSASGCDD 210
+L L A+K +S G+ EN +S+ S+FF Y S +
Sbjct: 139 KLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFF-LHSYDPSQENRNG 197
Query: 211 SAAIGEHVGGVQSGIADIEVTMVESHANLKIRSKKR-----------PKQLLKMVTGLHT 259
S + V++ + D+EVT++E+HAN++I S++R P QL K+V L +
Sbjct: 198 STS------SVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQS 251
Query: 260 MRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGSVDDIAAAVYQMLDRIHQE 310
+ L+ILH++VTT +Y +S KVEE C+L SVDDIA AV+ ML I +E
Sbjct: 252 LSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 130/200 (65%), Gaps = 14/200 (7%)
Query: 107 NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 166
N EEIE+QRMTHIAVERNRR+QMN +L+ LRS++P SYIQRGDQASI+GGAI+FV+ LEQ
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243
Query: 167 RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 226
+LQ L A+K S+ +N+ E S S++ + QS
Sbjct: 244 QLQSLEAQKRSQQSDDNKEQ-----IPEDNSLRNISSNKLRASNKEE--------QSSKL 290
Query: 227 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTT-TGEIVLYCLSVKVE 285
IE T++ESH NLKI+ ++ QLL+ + L +R T+LH+N+T+ T V Y ++K+E
Sbjct: 291 KIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKME 350
Query: 286 EDCKLGSVDDIAAAVYQMLD 305
++C LGS D+I AA+ Q+ D
Sbjct: 351 DECNLGSADEITAAIRQIFD 370
>AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:26107368-26108640 REVERSE
LENGTH=296
Length = 296
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 140/203 (68%), Gaps = 9/203 (4%)
Query: 112 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFL 171
ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q DQASII G I+++++LEQRLQ L
Sbjct: 98 ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSL 157
Query: 172 GAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSG---IADI 228
A+ ++ +++ FS+FF FPQYST+ + +A+ +AD+
Sbjct: 158 EAQLKATKLNQSPNI-----FSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADV 212
Query: 229 EVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDC 288
EVTMVE HAN+K+ +K +P+ L K++ +++ L+ LH+N+TT+ ++ L+ SVKVE DC
Sbjct: 213 EVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADC 272
Query: 289 KLG-SVDDIAAAVYQMLDRIHQE 310
+L S +++A V++++ R+H+E
Sbjct: 273 QLTPSGNEVANTVHEVVRRVHKE 295
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 128/209 (61%), Gaps = 10/209 (4%)
Query: 109 EEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRL 168
EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SY+QRGDQASIIGGAI FVRELEQ L
Sbjct: 190 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 249
Query: 169 QFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGV------- 221
Q L ++K E + S + A + + E GG
Sbjct: 250 QCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETA 309
Query: 222 --QSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYC 279
+S +AD+EV ++ A +KI S++RP QL+K + L + L+ILH N+TT + VLY
Sbjct: 310 ENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYS 369
Query: 280 LSVKVEEDCKLGSVDDIAAAVYQMLDRIH 308
+VK+ + + + +DIA+++ Q+ IH
Sbjct: 370 FNVKITSETRF-TAEDIASSIQQIFSFIH 397
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 135/200 (67%), Gaps = 15/200 (7%)
Query: 107 NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 166
N EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SYIQRGDQASI+GGAIN+V+ LEQ
Sbjct: 169 NNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQ 228
Query: 167 RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 226
+Q L ++K ++ +S +E ++ + + S D + + Q+ I
Sbjct: 229 IIQSLESQKRTQQQSNSEVVENAL---------NHLSGISSNDLWTTLED-----QTCIP 274
Query: 227 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTT-TGEIVLYCLSVKVE 285
IE T++++H +LK++ +K+ QLLK + L ++LT+LH+N+TT + V Y ++K+E
Sbjct: 275 KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKME 334
Query: 286 EDCKLGSVDDIAAAVYQMLD 305
++C L S D+I AAV+++ D
Sbjct: 335 DECDLESADEITAAVHRIFD 354
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 135/200 (67%), Gaps = 15/200 (7%)
Query: 107 NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQ 166
N EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SYIQRGDQASI+GGAIN+V+ LEQ
Sbjct: 118 NNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQ 177
Query: 167 RLQFLGAKKESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA 226
+Q L ++K ++ +S +E ++ + + S D + + Q+ I
Sbjct: 178 IIQSLESQKRTQQQSNSEVVENAL---------NHLSGISSNDLWTTLED-----QTCIP 223
Query: 227 DIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTT-TGEIVLYCLSVKVE 285
IE T++++H +LK++ +K+ QLLK + L ++LT+LH+N+TT + V Y ++K+E
Sbjct: 224 KIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKME 283
Query: 286 EDCKLGSVDDIAAAVYQMLD 305
++C L S D+I AAV+++ D
Sbjct: 284 DECDLESADEITAAVHRIFD 303
>AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:1846531-1848016
FORWARD LENGTH=202
Length = 202
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 28/192 (14%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
M+HIAVERNRR+QMNE+L LRSL P YI+RGDQASIIGG I F++EL+Q +Q L +KK
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 176 ESEG--------------KSENEAATASMPFSEFFSFPQYST--SASGCDDSAAIGEHVG 219
+ S AAT +PFS + ST C +S
Sbjct: 61 RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH------ 114
Query: 220 GVQSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYC 279
A++E + S+ L++ S++ QL+K+++ L + +LH+N+++ E VLY
Sbjct: 115 ------ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYF 168
Query: 280 LSVKVEEDCKLG 291
VK+ +C L
Sbjct: 169 FVVKIGLECHLS 180
>AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:21586606-21588941
REVERSE LENGTH=364
Length = 364
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 57/69 (82%)
Query: 114 QRMTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGA 173
Q+M+H+ VERNRRKQMNE+L+VLRSLMP Y++RGDQASIIGG + ++ EL+Q LQ L A
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 174 KKESEGKSE 182
KK+ + +E
Sbjct: 160 KKQRKTYAE 168
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 210 DSAAIGEHVGGVQSGIADIEVTMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNV 269
+S+ I E V +S +AD+EV ++ LK S K P Q++K++ L + L IL +N+
Sbjct: 270 ESSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNI 329
Query: 270 TTTGEIVLYCLSVKVEEDCKLGSVDDIAAAVYQ 302
T E +L ++K+ +C+L S +++A + Q
Sbjct: 330 NTVDETMLNSFTIKIGIECQL-SAEELAQQIQQ 361
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
+I ERNRR+++N+ L LRS++P I + D+ASII AI+++ + LQ+ K E+
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 108
Query: 178 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 232
E + +S+ FS+ F P S D G ++ + +++VT M
Sbjct: 109 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 162
Query: 233 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEED 287
E + + KR ++K+ ++ L IL N+T+ ++ + + ++ +E+
Sbjct: 163 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEE 217
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LR+++P + + D+AS++G AI ++ EL+ ++
Sbjct: 451 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAYINELKSKVV------ 502
Query: 176 ESEGKSENEAATASMPFSEF-FSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVE 234
K+E+E E SASG D S++ ++ +IEV ++
Sbjct: 503 ----KTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSS----IKPVGMEIEVKIIG 554
Query: 235 SHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 284
A +++ S KR ++++ L + L + H +++ ++++ +VK+
Sbjct: 555 WDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKM 604
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
++ ER RRK++N+ L +LRS++P+ I + D+ASI+G AI++++EL QR+ L E
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363
Query: 178 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 237
E S F PQ + + + G Q A +EV + E A
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQ---ARVEVRLREGRA 420
Query: 238 -NLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGS---V 293
N+ + +RP LL + L + L + ++ + L V E C+ G
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQEGQEILP 477
Query: 294 DDIAAAVY 301
D I A ++
Sbjct: 478 DQIKAVLF 485
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
++ ER RRK++N+ L +LRS++P+ I + D+ASI+G AI++++EL QR+ L E
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363
Query: 178 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 237
E S F PQ + + + G Q A +EV + E A
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQ---ARVEVRLREGRA 420
Query: 238 -NLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGS---V 293
N+ + +RP LL + L + L + ++ + L V E C+ G
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQEGQEILP 477
Query: 294 DDIAAAVY 301
D I A ++
Sbjct: 478 DQIKAVLF 485
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
++ ER RRK++N+ L +LRS++P+ I + D+ASI+G AI++++EL QR+ L E
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL--HNEL 363
Query: 178 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 237
E S F PQ + + + G Q A +EV + E A
Sbjct: 364 ESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQ---ARVEVRLREGRA 420
Query: 238 -NLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKVEEDCKLGS---V 293
N+ + +RP LL + L + L + ++ + L V E C+ G
Sbjct: 421 VNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG---FALDVFRAEQCQEGQEILP 477
Query: 294 DDIAAAVY 301
D I A ++
Sbjct: 478 DQIKAVLF 485
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
+I ERNRR+++N+ L LRS++P I + D+ASII AI+++ + LQ+ K E+
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 109
Query: 178 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 232
E + +S+ FS+ F P S D G ++ + +++VT M
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 163
Query: 233 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 284
E + + KR ++K+ ++ L IL N+T+ ++ + + ++V
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEV 215
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
+I ERNRR+++N+ L LRS++P I + D+ASII AI+++ + LQ+ K E+
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 109
Query: 178 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 232
E + +S+ FS+ F P S D G ++ + +++VT M
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 163
Query: 233 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 284
E + + KR ++K+ ++ L IL N+T+ ++ + + +++
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEI 215
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
++ ER RRK++N+ L +LRS++P+ I + D+ASI+G AI++++EL QR+ L + ES
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 178 EGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVTMVESHA 237
S +++ P + Y C S+ + + +EV + E A
Sbjct: 326 TPPS----SSSLHPLTPTPQTLSYRVKEELCPSSS-----LPSPKGQQPRVEVRLREGKA 376
Query: 238 -NLKIRSKKRPKQLLKMVTGLHTMRLTI 264
N+ + +RP LL + L + L +
Sbjct: 377 VNIHMFCGRRPGLLLSTMRALDNLGLDV 404
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LRS++P I + D+AS++G A++++ EL +L+ + A++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 176 ESEGKSEN 183
E G S N
Sbjct: 490 ERLGYSSN 497
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LRS++P I + D+AS++G A++++ EL +L+ + A++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 176 ESEGKSEN 183
E G S N
Sbjct: 490 ERLGYSSN 497
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LRS++P I + D+AS++G A++++ EL +L+ + A++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 176 ESEGKSEN 183
E G S N
Sbjct: 490 ERLGYSSN 497
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
+I ERNRR+++N+ L LRS++P I + D+ASII AI+++ + LQ+ K E+
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYI----EGLQYEEKKLEA 109
Query: 178 EGKSENEAATASMPFSEFFS----FPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT-M 232
E + +S+ FS+ F P S D G ++ + +++VT M
Sbjct: 110 EIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIE--VLELKVTFM 163
Query: 233 VESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 284
E + + KR ++K+ ++ L IL N+T+ ++ + + +++
Sbjct: 164 GERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEL 215
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LRS++P I + D+AS++G AI++++EL+++++ + ++
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAISYIKELQEKVKIMEDER 451
Query: 176 ESEGKSENEAATASM 190
KS +E+ T ++
Sbjct: 452 VGTDKSLSESNTITV 466
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 118 HIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKKES 177
++ ER RRK++N+ L LRSL+P I + D+ASI+G AIN+V+EL+ + L + E
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 178 EGKSEN 183
++E+
Sbjct: 373 NSETED 378
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LR+++P + + D+AS++G AI+++ EL+ +LQ + K
Sbjct: 415 LNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLGDAISYISELKSKLQKAESDK 472
Query: 176 ESEGKS----ENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIADIEVT 231
E K EA A + Q +S+ + E +++V
Sbjct: 473 EELQKQIDVMNKEAGNAKSSVKDRKCLNQ---------ESSVLIE---------MEVDVK 514
Query: 232 MVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 284
++ A ++I+ KR K + L + L + H +++ ++++ +VK+
Sbjct: 515 IIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKM 567
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 116 MTHIAVERNRRKQMNEYLSVLRSLMPESYIQRGDQASIIGGAINFVRELEQRLQFLGAKK 175
+ H+ ER RR+++N+ LR+++P + + D+AS++G AI+++ EL+ +LQ + K
Sbjct: 414 LNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLGDAISYINELKSKLQQAESDK 471
Query: 176 ESEGKSENEAATASMPFSEFFSFPQYSTSASGCDDSAAIGEHVGGVQSGIA-----DIEV 230
E K + + + GC A E Q A +I+V
Sbjct: 472 EEIQK-------------KLDGMSKEGNNGKGCGSRAK--ERKSSNQDSTASSIEMEIDV 516
Query: 231 TMVESHANLKIRSKKRPKQLLKMVTGLHTMRLTILHMNVTTTGEIVLYCLSVKV 284
++ ++++ K+ + + L + L + H +++ ++++ +VK+
Sbjct: 517 KIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKM 570