Miyakogusa Predicted Gene

Lj6g3v0468290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0468290.1 tr|B9MZQ3|B9MZQ3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595547 PE=3 SV=1,66.67,2e-19,
,CUFF.58143.1
         (63 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27410.2 | Symbols:  | D-aminoacid aminotransferase-like PLP-...   113   2e-26
AT5G27410.1 | Symbols:  | D-aminoacid aminotransferase-like PLP-...   112   5e-26
AT3G05190.1 | Symbols:  | D-aminoacid aminotransferase-like PLP-...   101   1e-22

>AT5G27410.2 | Symbols:  | D-aminoacid aminotransferase-like
           PLP-dependent enzymes superfamily protein |
           chr5:9676362-9682468 FORWARD LENGTH=936
          Length = 936

 Score =  113 bits (283), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 1   MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
           MYSFAQRDDIEVLDEPLYA FL+ TG+DRPY+D LLSKME DG ++V+D IYGPG KKYR
Sbjct: 395 MYSFAQRDDIEVLDEPLYAAFLKSTGVDRPYKDELLSKMECDGEKVVKDIIYGPGKKKYR 454

Query: 61  FCK 63
           FCK
Sbjct: 455 FCK 457


>AT5G27410.1 | Symbols:  | D-aminoacid aminotransferase-like
          PLP-dependent enzymes superfamily protein |
          chr5:9678821-9682468 FORWARD LENGTH=559
          Length = 559

 Score =  112 bits (280), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/63 (79%), Positives = 56/63 (88%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSFAQRDDIEVLDEPLYA FL+ TG+DRPY+D LLSKME DG ++V+D IYGPG KKYR
Sbjct: 18 MYSFAQRDDIEVLDEPLYAAFLKSTGVDRPYKDELLSKMECDGEKVVKDIIYGPGKKKYR 77

Query: 61 FCK 63
          FCK
Sbjct: 78 FCK 80


>AT3G05190.1 | Symbols:  | D-aminoacid aminotransferase-like
          PLP-dependent enzymes superfamily protein |
          chr3:1471457-1475067 FORWARD LENGTH=555
          Length = 555

 Score =  101 bits (251), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 54/63 (85%)

Query: 1  MYSFAQRDDIEVLDEPLYANFLRVTGLDRPYRDILLSKMEPDGNQIVEDTIYGPGNKKYR 60
          MYSFAQR D EV+DEPLYA+FL+ TG DRPYRD +LSKME +G ++V+D IYG G+KKYR
Sbjct: 21 MYSFAQRLDTEVVDEPLYASFLKATGFDRPYRDEVLSKMECNGEKVVKDVIYGSGSKKYR 80

Query: 61 FCK 63
          +CK
Sbjct: 81 YCK 83