Miyakogusa Predicted Gene

Lj6g3v0466930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0466930.1 Non Chatacterized Hit- tr|I1MYZ6|I1MYZ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51437
PE,75.51,0.00000000000002,SUBFAMILY NOT NAMED,NULL; ENDO BETA
N-ACETYLGLUCOSAMINIDASE,NULL; Glyco_hydro_85,Glycoside
hydrolase,CUFF.58138.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05460.1 | Symbols:  | Glycosyl hydrolase family 85  | chr5:1...    74   2e-14
AT3G11040.1 | Symbols:  | Glycosyl hydrolase family 85  | chr3:3...    70   2e-13

>AT5G05460.1 | Symbols:  | Glycosyl hydrolase family 85  |
           chr5:1615615-1618771 FORWARD LENGTH=680
          Length = 680

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 33/37 (89%)

Query: 16  YDSITIDGKLNWQDQLNEYNKPFFDICDGIFVNYTWK 52
           YDS+TIDG L WQDQL E NKPFFDICDGIF+NYTWK
Sbjct: 210 YDSVTIDGHLAWQDQLTENNKPFFDICDGIFMNYTWK 246


>AT3G11040.1 | Symbols:  | Glycosyl hydrolase family 85  |
           chr3:3460143-3463312 FORWARD LENGTH=701
          Length = 701

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 32/37 (86%)

Query: 16  YDSITIDGKLNWQDQLNEYNKPFFDICDGIFVNYTWK 52
           YDS+T+ G L WQDQL E NKPFFD+CDGIF+NYTWK
Sbjct: 215 YDSVTVRGNLQWQDQLTELNKPFFDLCDGIFMNYTWK 251