Miyakogusa Predicted Gene

Lj6g3v0466600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0466600.1 Non Chatacterized Hit- tr|I1MYX7|I1MYX7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27806
PE,86.19,0,Aa_trans,Amino acid transporter, transmembrane; seg,NULL;
AMINO ACID TRANSPORTER,NULL,CUFF.57911.1
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56200.1 | Symbols:  | Transmembrane amino acid transporter f...   199   2e-51
AT2G40420.1 | Symbols:  | Transmembrane amino acid transporter f...   180   7e-46
AT3G30390.2 | Symbols:  | Transmembrane amino acid transporter f...   162   2e-40
AT3G30390.1 | Symbols:  | Transmembrane amino acid transporter f...   162   2e-40
AT5G38820.1 | Symbols:  | Transmembrane amino acid transporter f...   162   2e-40
AT1G80510.1 | Symbols:  | Transmembrane amino acid transporter f...   113   2e-25

>AT3G56200.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr3:20850087-20851779 FORWARD
           LENGTH=435
          Length = 435

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/195 (51%), Positives = 132/195 (67%)

Query: 47  FNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGV 106
           FNV+TSI+GAGIMS+PA  KVLG++PAF +I ++A L+ ISV +LM+ T +GE+ TYAGV
Sbjct: 30  FNVSTSIIGAGIMSMPAAFKVLGIVPAFLIITIIAWLSTISVGFLMKSTLAGESTTYAGV 89

Query: 107 MREAFGPPGALTAQVCVXXXXXXXXXXXXXXXXDVLSGNHSGDEVHLGILQQWFGIHWWN 166
           M+E+FG  G++  Q+                  DVLSGN +G   H+G+LQ+WFG +WWN
Sbjct: 90  MKESFGKTGSIAVQIATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQEWFGSYWWN 149

Query: 167 SREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTP 226
           +R FA+      V+LPLVL RRVE L  SSAVS  LAV FV I   LAI A+V G+T+ P
Sbjct: 150 TRIFALLFVYGFVLLPLVLRRRVERLAISSAVSFLLAVLFVVISSVLAISALVNGQTKNP 209

Query: 227 RLFPQLDYQTSFFDL 241
           RLFP+L    SF+ L
Sbjct: 210 RLFPELSNGGSFWQL 224


>AT2G40420.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr2:16877300-16878982 FORWARD
           LENGTH=440
          Length = 440

 Score =  180 bits (457), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/196 (51%), Positives = 133/196 (67%), Gaps = 1/196 (0%)

Query: 47  FNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGV 106
           FN++TSIVGAGIM+IPA  KVLGVIP+ ++I+++A L+ +S  +LM+ + +GE+ TYAGV
Sbjct: 31  FNISTSIVGAGIMAIPAAFKVLGVIPSLSIIVIIAWLSNVSAGFLMKSSLAGESTTYAGV 90

Query: 107 MREAFGPPGALTAQVCVXXXXXXXXXXXXXXXXDVLSGNHSGDEVHLGILQQWFGIHWWN 166
           M+E+FG  GA+   V                  DV+SGN     +HLG+LQ+WFG HWWN
Sbjct: 91  MKESFGKSGAVAVTVVTMVVTFGSMIIFSIIIGDVISGNEKDGIIHLGLLQEWFGSHWWN 150

Query: 167 SREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTP 226
           +R F +    V + LPLVL RRVE L +SSA+S  LA+ FV I   LAIIA+VQGKT+ P
Sbjct: 151 TRFFGLLFIFVFLFLPLVLCRRVERLAFSSAISFLLALLFVVISSVLAIIALVQGKTKPP 210

Query: 227 RLFPQL-DYQTSFFDL 241
           RLFP+L D   SFF L
Sbjct: 211 RLFPELNDGGLSFFSL 226


>AT3G30390.2 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr3:11977112-11978827 REVERSE
           LENGTH=460
          Length = 460

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 123/195 (63%)

Query: 47  FNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGV 106
           FN+AT+I+GAGIM++PA +K+LG+     MI+V+A L + S+++L+RF+ +G+ ++Y G+
Sbjct: 50  FNLATTIIGAGIMALPATMKILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGL 109

Query: 107 MREAFGPPGALTAQVCVXXXXXXXXXXXXXXXXDVLSGNHSGDEVHLGILQQWFGIHWWN 166
           M  +FG PG +  QV V                DVL+G       H G+L+ WFG HWWN
Sbjct: 110 MGGSFGNPGRILLQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHHWWN 169

Query: 167 SREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTP 226
            R   + +T++ V  PL  ++R++SLK++SA+S  LAV F+ I  G++I+ ++ G    P
Sbjct: 170 GRAAILLITTLGVFAPLACFKRIDSLKFTSALSVALAVVFLIITAGISIMKLISGGVAMP 229

Query: 227 RLFPQLDYQTSFFDL 241
           RL P +   TSF++L
Sbjct: 230 RLLPDVTDLTSFWNL 244


>AT3G30390.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr3:11977112-11978827 REVERSE
           LENGTH=460
          Length = 460

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 123/195 (63%)

Query: 47  FNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGV 106
           FN+AT+I+GAGIM++PA +K+LG+     MI+V+A L + S+++L+RF+ +G+ ++Y G+
Sbjct: 50  FNLATTIIGAGIMALPATMKILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGL 109

Query: 107 MREAFGPPGALTAQVCVXXXXXXXXXXXXXXXXDVLSGNHSGDEVHLGILQQWFGIHWWN 166
           M  +FG PG +  QV V                DVL+G       H G+L+ WFG HWWN
Sbjct: 110 MGGSFGNPGRILLQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHHWWN 169

Query: 167 SREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTP 226
            R   + +T++ V  PL  ++R++SLK++SA+S  LAV F+ I  G++I+ ++ G    P
Sbjct: 170 GRAAILLITTLGVFAPLACFKRIDSLKFTSALSVALAVVFLIITAGISIMKLISGGVAMP 229

Query: 227 RLFPQLDYQTSFFDL 241
           RL P +   TSF++L
Sbjct: 230 RLLPDVTDLTSFWNL 244


>AT5G38820.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr5:15543481-15545182 FORWARD
           LENGTH=456
          Length = 456

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 122/195 (62%)

Query: 47  FNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGV 106
           FN+AT+I+GAGIM++PA +K+LG+IP   +I+++A L + S+++L+RF++ G  ++Y GV
Sbjct: 42  FNLATTIIGAGIMALPATMKILGLIPGITIIVLMAFLTDASIEFLLRFSNIGNQRSYGGV 101

Query: 107 MREAFGPPGALTAQVCVXXXXXXXXXXXXXXXXDVLSGNHSGDEVHLGILQQWFGIHWWN 166
           M ++FG  G +  QV +                DVL+G +     H G+L+ WFGI WWN
Sbjct: 102 MDDSFGKCGRIMLQVSILVSNIGVLIVYMIIIGDVLAGKNEYGIHHAGMLEGWFGISWWN 161

Query: 167 SREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTP 226
            R F + VT++ V  PL  ++R++SL+++SA+S  LAV F+ I  G+ II +       P
Sbjct: 162 RRTFVLLVTTLTVFAPLTCFKRIDSLRFTSAISVALAVVFLVITAGITIIKLFTDGLMMP 221

Query: 227 RLFPQLDYQTSFFDL 241
           RL P +   +SF+ L
Sbjct: 222 RLLPNVTDLSSFWKL 236


>AT1G80510.1 | Symbols:  | Transmembrane amino acid transporter
           family protein | chr1:30273100-30274569 FORWARD
           LENGTH=489
          Length = 489

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 116/195 (59%), Gaps = 4/195 (2%)

Query: 47  FNVATSIVGAGIMSIPALLKVLGVIPAFAMILVVAVLAEISVDYLMRFTHSGETKTYAGV 106
           FN+ TSI+GAGIM++PA +KVLG++  F +I+++A+L+EISV+ L+RF+   ++K+Y  V
Sbjct: 82  FNLTTSIIGAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLVRFSVLYKSKSYGEV 141

Query: 107 MREAFGPPGALTAQVCVXXXXXXXXXXXXXXXXDVLSGNHSGDEVHLGILQQWFGIHWWN 166
           ++ A G    + +++C+                DV+SG+      H+G+L QW G  +W+
Sbjct: 142 VQFALGKTARVLSEICIIVNNGGVLVVYLIIMGDVMSGSLH----HIGVLDQWLGNGFWD 197

Query: 167 SREFAMFVTSVLVMLPLVLYRRVESLKYSSAVSTFLAVAFVGICCGLAIIAMVQGKTQTP 226
            R+  + +  V+ + PL    +++SL  +SA S  LAV FV +C  +A I +++G    P
Sbjct: 198 HRKVLILIVMVIFLAPLCALNKIDSLSVTSAASVALAVVFVVVCFVVATIKLIEGTIDPP 257

Query: 227 RLFPQLDYQTSFFDL 241
           RL P    + +  DL
Sbjct: 258 RLSPDFGSKQAILDL 272