Miyakogusa Predicted Gene

Lj6g3v0452250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0452250.1 Non Chatacterized Hit- tr|D7LDC3|D7LDC3_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,65.62,5e-18,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF399,Domain of unknow,CUFF.57920.1
         (312 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40400.2 | Symbols:  | Protein of unknown function (DUF399 an...   500   e-142
AT2G40400.1 | Symbols:  | Protein of unknown function (DUF399 an...   500   e-142
AT3G56140.1 | Symbols:  | Protein of unknown function (DUF399 an...   499   e-141

>AT2G40400.2 | Symbols:  | Protein of unknown function (DUF399 and
           DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735
          Length = 735

 Score =  500 bits (1287), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 230/313 (73%), Positives = 274/313 (87%), Gaps = 1/313 (0%)

Query: 1   MNSRVVYLGEAEQVPVRDDKELELEIVKNLQRRCVEKEKRLSLALEAFPSDLQEPLNQYL 60
           +N+R+VYLGEAEQVP RDDK LELEIV+NL++RC+E +++LSLALEAFP DLQE LNQY+
Sbjct: 148 LNARIVYLGEAEQVPTRDDKVLELEIVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYM 207

Query: 61  DKKIDGETLKTYTGHWPPERWQEYEPILSYCLENGIRLVACGTPLKILRTVQAEGIRGLT 120
           DK++DGE LK+Y  HWP +RWQEYEP+LSYC +NG++L+ACGTPLK+LRTVQAEGIRGL+
Sbjct: 208 DKRMDGEVLKSYVSHWPVQRWQEYEPLLSYCRDNGVKLIACGTPLKVLRTVQAEGIRGLS 267

Query: 121 KAERKLYAPPAXXXXXXXXXXXXRRSLLDSTPNLSF-PFGPSSYLSAQARVVDEYTMSQI 179
           ++ERKLY PPA            R S L+  P     PFGPSSYLSAQARVV+++TMSQ+
Sbjct: 268 ESERKLYTPPAGSGFISGFTSFSRSSSLNMNPLTQIVPFGPSSYLSAQARVVEDHTMSQV 327

Query: 180 ILQNVLDGGANGMLLVVTGASHVTYGSRGTGVPARISRKIQKKNQVVILLDPERQFIRRE 239
           I+Q V DGG  GML+VVTGA+HV YGSRGTG+PARISRKI KK+Q+V+LLDPERQF+R+E
Sbjct: 328 IVQAVADGGGTGMLVVVTGANHVEYGSRGTGLPARISRKIPKKSQLVVLLDPERQFLRKE 387

Query: 240 GEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQ 299
           GE PVADFLWYSAARPC+RNCFDRAEIARVMNAAG+RRDALPQD+QKG+DLGLVSPE+LQ
Sbjct: 388 GESPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQ 447

Query: 300 NFFDLEKYPLISE 312
           NFFDLE+YPLISE
Sbjct: 448 NFFDLEQYPLISE 460


>AT2G40400.1 | Symbols:  | Protein of unknown function (DUF399 and
           DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735
          Length = 735

 Score =  500 bits (1287), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 230/313 (73%), Positives = 274/313 (87%), Gaps = 1/313 (0%)

Query: 1   MNSRVVYLGEAEQVPVRDDKELELEIVKNLQRRCVEKEKRLSLALEAFPSDLQEPLNQYL 60
           +N+R+VYLGEAEQVP RDDK LELEIV+NL++RC+E +++LSLALEAFP DLQE LNQY+
Sbjct: 148 LNARIVYLGEAEQVPTRDDKVLELEIVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYM 207

Query: 61  DKKIDGETLKTYTGHWPPERWQEYEPILSYCLENGIRLVACGTPLKILRTVQAEGIRGLT 120
           DK++DGE LK+Y  HWP +RWQEYEP+LSYC +NG++L+ACGTPLK+LRTVQAEGIRGL+
Sbjct: 208 DKRMDGEVLKSYVSHWPVQRWQEYEPLLSYCRDNGVKLIACGTPLKVLRTVQAEGIRGLS 267

Query: 121 KAERKLYAPPAXXXXXXXXXXXXRRSLLDSTPNLSF-PFGPSSYLSAQARVVDEYTMSQI 179
           ++ERKLY PPA            R S L+  P     PFGPSSYLSAQARVV+++TMSQ+
Sbjct: 268 ESERKLYTPPAGSGFISGFTSFSRSSSLNMNPLTQIVPFGPSSYLSAQARVVEDHTMSQV 327

Query: 180 ILQNVLDGGANGMLLVVTGASHVTYGSRGTGVPARISRKIQKKNQVVILLDPERQFIRRE 239
           I+Q V DGG  GML+VVTGA+HV YGSRGTG+PARISRKI KK+Q+V+LLDPERQF+R+E
Sbjct: 328 IVQAVADGGGTGMLVVVTGANHVEYGSRGTGLPARISRKIPKKSQLVVLLDPERQFLRKE 387

Query: 240 GEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQ 299
           GE PVADFLWYSAARPC+RNCFDRAEIARVMNAAG+RRDALPQD+QKG+DLGLVSPE+LQ
Sbjct: 388 GESPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQ 447

Query: 300 NFFDLEKYPLISE 312
           NFFDLE+YPLISE
Sbjct: 448 NFFDLEQYPLISE 460


>AT3G56140.1 | Symbols:  | Protein of unknown function (DUF399 and
           DUF3411) | chr3:20829407-20832669 FORWARD LENGTH=745
          Length = 745

 Score =  499 bits (1284), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 236/313 (75%), Positives = 272/313 (86%), Gaps = 1/313 (0%)

Query: 1   MNSRVVYLGEAEQVPVRDDKELELEIVKNLQRRCVEKEKRLSLALEAFPSDLQEPLNQYL 60
           +N+RVVYLGEAEQVP +DDKELELEIV+NL++RCVE E+++S+ALEAFP DLQ+ LNQY+
Sbjct: 157 LNARVVYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVALEAFPLDLQDQLNQYM 216

Query: 61  DKKIDGETLKTYTGHWPPERWQEYEPILSYCLENGIRLVACGTPLKILRTVQAEGIRGLT 120
           DK++DGETLK+Y  HWP +RWQEYEP+LSYC +N +RL+ACGTPLK+LRTVQAEGIRGL+
Sbjct: 217 DKRMDGETLKSYVTHWPAQRWQEYEPLLSYCRDNSVRLIACGTPLKVLRTVQAEGIRGLS 276

Query: 121 KAERKLYAPPAXXXXXXXXXXXXRRSLLD-STPNLSFPFGPSSYLSAQARVVDEYTMSQI 179
           K+ERKLY PPA            RRS  D S P    PFGPSSYLSAQARVV+++TMSQ+
Sbjct: 277 KSERKLYTPPAGSGFISGFSSFSRRSTFDMSLPTQIVPFGPSSYLSAQARVVEDHTMSQV 336

Query: 180 ILQNVLDGGANGMLLVVTGASHVTYGSRGTGVPARISRKIQKKNQVVILLDPERQFIRRE 239
           ILQ V DGG  G+LLVVTGASHV YGSRGTG+PARISRK  KKNQVV+LLDPERQF+RRE
Sbjct: 337 ILQAVADGGGTGLLLVVTGASHVEYGSRGTGLPARISRKFPKKNQVVVLLDPERQFLRRE 396

Query: 240 GEVPVADFLWYSAARPCNRNCFDRAEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQ 299
           GE PVADFLWYSAARPC+RNCFDRAEIARVMNAAG+RRDALP D+Q G+DLGLVSPEVLQ
Sbjct: 397 GETPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQ 456

Query: 300 NFFDLEKYPLISE 312
           N FDLE+YPLISE
Sbjct: 457 NLFDLEQYPLISE 469