Miyakogusa Predicted Gene

Lj6g3v0452120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0452120.1 Non Chatacterized Hit- tr|I1LVS1|I1LVS1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,53.68,4e-16,PDH_ADH,Prephenate dehydrogenase; seg,NULL; no
description,NAD(P)-binding domain; PDH,Prephenate deh,CUFF.57917.1
         (266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G34930.1 | Symbols:  | arogenate dehydrogenase | chr5:1323339...   295   2e-80
AT1G15710.1 | Symbols:  | prephenate dehydrogenase family protei...   273   1e-73

>AT5G34930.1 | Symbols:  | arogenate dehydrogenase |
           chr5:13233391-13235522 FORWARD LENGTH=640
          Length = 640

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 138/250 (55%), Positives = 184/250 (73%), Gaps = 4/250 (1%)

Query: 15  LKIGIVGFGTFGQFLAKTMIKQGHTLMATSRTDYSQLCHQLGIHFFRDVTAFLNAGMDVI 74
           LKIGIVGFG FGQFL KTM+KQGHT++A SR+DY+    +LG+ +F D+        +VI
Sbjct: 365 LKIGIVGFGNFGQFLGKTMVKQGHTVLAYSRSDYTDEAAKLGVSYFSDLDDLFEEHPEVI 424

Query: 75  LLCTSILSLSEVVGSMPLDRLKRPTLFVDVLSVKEHPKDVLLKVLPEESDILCTHPMFGP 134
           +LCTSILS  +V+ S+P  RLKR TLFVDVLSVKE P+++ L+ LP++ DILCTHPMFGP
Sbjct: 425 ILCTSILSTEKVLESLPFQRLKRSTLFVDVLSVKEFPRNLFLQTLPQDFDILCTHPMFGP 484

Query: 135 VSGKNGWTDLTFMFDKVRI----RDEATCFKYLQIFATEGCKMVEMTCEEHDKAAAKSQF 190
            SGKNGW +L F+FDKVRI    R ++ C  +L IFA EGC+MVEM+C EHD  AA SQF
Sbjct: 485 ESGKNGWNNLAFVFDKVRIGMDDRRKSRCNSFLDIFAREGCRMVEMSCAEHDWHAAGSQF 544

Query: 191 ITHTIGRALGEMDIKPTPVDTKGFQALIQVKDTVMGSSYDLYSGLFVHNRFARQELENLE 250
           ITHT+GR L ++ ++ TP+DTKG++ L+++ +   G S+DLY GLF++N  A ++LE   
Sbjct: 545 ITHTVGRLLEKLSLESTPIDTKGYETLLKLVENTAGDSFDLYYGLFLYNPNAMEQLERFH 604

Query: 251 QALYKVKEKL 260
            A   +K +L
Sbjct: 605 VAFESLKTQL 614



 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 128/256 (50%), Positives = 182/256 (71%), Gaps = 6/256 (2%)

Query: 15  LKIGIVGFGTFGQFLAKTMIKQGHTLMATSRTDYSQLCHQLGIHFFRDVTAFLNAGMDVI 74
           L+I I+GFG +GQFLA+T+I QGH L A SR+D+S    +LG+ +F D+        DV+
Sbjct: 53  LRIAIIGFGNYGQFLAETLISQGHILFAHSRSDHSSAARRLGVSYFTDLHDLCERHPDVV 112

Query: 75  LLCTSILSLSEVVGSMPLDRLKRPTLFVDVLSVKEHPKDVLLKVLPEESDILCTHPMFGP 134
           LLCTSILS+  ++ ++P  RL+R TLFVDVLSVKE  K +LL+ LPE+ DILCTHPMFGP
Sbjct: 113 LLCTSILSIENILKTLPFQRLRRNTLFVDVLSVKEFAKTLLLQYLPEDFDILCTHPMFGP 172

Query: 135 --VSGKNGWTDLTFMFDKVRIRDE----ATCFKYLQIFATEGCKMVEMTCEEHDKAAAKS 188
             VS  +GW  L F++DKVRI +E    + C  +L+IF  EGC+MVEM+  +HDK AA+S
Sbjct: 173 QSVSSNHGWRGLRFVYDKVRIGEERLRVSRCESFLEIFVREGCEMVEMSVTDHDKFAAES 232

Query: 189 QFITHTIGRALGEMDIKPTPVDTKGFQALIQVKDTVMGSSYDLYSGLFVHNRFARQELEN 248
           QFITHT+GR LG + +  TP++TKG++AL+ + + + G S+DLY GLFV+N  + + LE 
Sbjct: 233 QFITHTLGRLLGMLKLISTPINTKGYEALLDLAENICGDSFDLYYGLFVYNNNSLEVLER 292

Query: 249 LEQALYKVKEKLIQSI 264
           ++ A   ++++L   +
Sbjct: 293 IDLAFEALRKELFSRL 308


>AT1G15710.1 | Symbols:  | prephenate dehydrogenase family protein |
           chr1:5404505-5405581 FORWARD LENGTH=358
          Length = 358

 Score =  273 bits (697), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 129/251 (51%), Positives = 177/251 (70%), Gaps = 4/251 (1%)

Query: 15  LKIGIVGFGTFGQFLAKTMIKQGHTLMATSRTDYSQLCHQLGIHFFRDVTAFLNAGMDVI 74
           LKI ++GFG FGQFL+KT+I+ GH L+  SR+DYS   + +G  FF +         DV+
Sbjct: 59  LKIAVLGFGNFGQFLSKTLIRHGHDLITHSRSDYSDAANSIGARFFDNPHDLCEQHPDVV 118

Query: 75  LLCTSILSLSEVVGSMPLDRLKRPTLFVDVLSVKEHPKDVLLKVLPEESDILCTHPMFGP 134
           LLCTSILS   V+ S P  RL+R TLFVDVLSVKE PK + +K LP+E DILCTHPMFGP
Sbjct: 119 LLCTSILSTESVLRSFPFQRLRRSTLFVDVLSVKEFPKALFIKYLPKEFDILCTHPMFGP 178

Query: 135 VSGKNGWTDLTFMFDKVRIRDEAT----CFKYLQIFATEGCKMVEMTCEEHDKAAAKSQF 190
            SGK+ W+ L F++DKVRI D A+    C K+L+IF  EGCKMVEM+CE+HD  AA SQF
Sbjct: 179 ESGKHSWSGLPFVYDKVRIGDAASRQERCEKFLRIFENEGCKMVEMSCEKHDYYAAGSQF 238

Query: 191 ITHTIGRALGEMDIKPTPVDTKGFQALIQVKDTVMGSSYDLYSGLFVHNRFARQELENLE 250
           +THT+GR L +  ++ +P++TKG++ L+ + +     S++L+ GLF++N  A ++LE L+
Sbjct: 239 VTHTMGRVLEKYGVESSPINTKGYETLLDLVENTSSDSFELFYGLFMYNPNALEQLERLD 298

Query: 251 QALYKVKEKLI 261
            A   VK++L 
Sbjct: 299 MAFESVKKELF 309