Miyakogusa Predicted Gene
- Lj6g3v0435070.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0435070.2 tr|G7J5W4|G7J5W4_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g1,22.71,0.0000003,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; seg,NULL; PPR: pentatricopeptide
repea,CUFF.57841.2
(462 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 9e-32
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 124 1e-28
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 86 6e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 82 7e-16
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 79 8e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 77 3e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 69 5e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 6e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 2e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 66 6e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 2e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 3e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 3e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 63 4e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 6e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 62 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 60 4e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 7e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 1e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 7e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 221/442 (50%), Gaps = 11/442 (2%)
Query: 18 QTLFEIISTTPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDH 77
+ + +++ ++P + ++ AL+ SG+RV+Q VEDVL + +FF+W+ + ++H
Sbjct: 73 KNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEH 132
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
+ +++++++ K + MWD IN+M K+ ++++ TF V Y A +AI F
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKK-MLNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREG 197
VME Y ++VA N L+SA+C +A + ++++ PD TY+IL+EGW +E
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEP 251
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
N A+E F EM I++G P + S + ++ + EA+ SM C P
Sbjct: 252 NLPKAREVFREM-IDAGCHP--DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y + ++ R+ E + ++ ++ +++NS++ + N ++ +++
Sbjct: 309 IYSVLVHTYGTEN--RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 366
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNR 377
+M +G P+S + N++ R LI+ + +A VF +M+K C PD I+++ + +
Sbjct: 367 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKK 425
Query: 378 DAFMAMKVWKCEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLS 437
+ A KVWK + T + +A E+MI GI+ + T
Sbjct: 426 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG 485
Query: 438 KLKHRLVKGRKE----FLYEEL 455
+L+ L+K +E FL E++
Sbjct: 486 RLRQLLIKEEREDVLKFLNEKM 507
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 168/342 (49%), Gaps = 7/342 (2%)
Query: 48 VEDVLKLSYDIPSH-AVKFFRWAGHRLLHDH-TPYSWNLVVDVLGKNLLFDAMWDAINSM 105
+E + + IP H ++ FF WA R +DH +P+ +N ++D+ GK FD W I+ M
Sbjct: 118 IEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLM 177
Query: 106 AKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKT 165
R IS+ TF + YV AGL +A+ F ME+Y CV D +A + ++S + +
Sbjct: 178 KSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRA 237
Query: 166 LEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS 225
EA + +K PD Y L+ GW R G A++ F EM + +G +P N Y
Sbjct: 238 SEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKL-AGIEP-NVYTYSI 295
Query: 226 FLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGR 285
+ L + I A F M D C P + + VK + M +
Sbjct: 296 VIDALCRC-GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM--K 352
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
K +P T YN ++ + +LE A K+++ M+ + ++ T+N +FR++ K R +
Sbjct: 353 KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 346 DASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
A R++S+M++ +C P+ + +R+++ ++ M +K+ K
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKK 454
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 199/429 (46%), Gaps = 6/429 (1%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+E L++ + ++ + + +VL+ A +FF WA R H ++N ++ +L K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 207
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
F+ M + M + GL+++ TF ++ AA A+ FE+M+ Y+ V
Sbjct: 208 TRQFETMVSVLEEMGTK-GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVI 211
+N L+ ++ EA +K+ P+ TY +L+ GW R N + A + +M I
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM-I 325
Query: 212 ESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHD 271
+ G P + A++ L L++ +A+K F M+ + P +R Y + K
Sbjct: 326 DQGLKP-DIVAHNVMLEGLLRSRKK-SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 272 VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTY 331
+ A +++ M+ + LQP ++Y ++ + L+T +++ +M +G PD TY
Sbjct: 384 METAIEYFDDMV--DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 332 NLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVE 391
N + + + + A+R++++M++NE P + ++ Y R+ M VW+ ++
Sbjct: 442 NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIK 501
Query: 392 HYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEFL 451
+++ EA +Y E+M+ +G+K +K +G + +
Sbjct: 502 KGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Query: 452 YEELLRKWK 460
+EEL ++ K
Sbjct: 562 FEELAQRAK 570
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 199/436 (45%), Gaps = 15/436 (3%)
Query: 18 QTLFEIISTTPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDH 77
+ + +I++ VE L ++ ++++ +E+VLK + A+ F+WA ++ H
Sbjct: 67 ERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKH 126
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
T ++N +++ LGK F +W ++ M K L+S TFA + Y A +AI F
Sbjct: 127 TTSNYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIGAF 185
Query: 138 EVMENYRCVRDVVALNTLMSAVCSG---GKTLEAYDYLQDVKKEIRPDGDTYAILMEGWE 194
ME + + N ++ + G + +D ++ KK PD +Y IL+EGW
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK--KKRFEPDIKSYTILLEGWG 243
Query: 195 REGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYP 254
+E N + E EM E G++P + AY + K EA++FF+ M R C P
Sbjct: 244 QELNLLRVDEVNREMKDE-GFEP-DVVAYGIIINAHCKAKK-YEEAIRFFNEMEQRNCKP 300
Query: 255 GLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ + + + + A F+E L+ T YN+++ Y + +E A K
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT--YNALVGAYCWSQRMEDAYK 358
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
+D+M +G P++ TY+++ LI+ ++ ++A V+ M C P + +R++
Sbjct: 359 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 415
Query: 375 DNRDAFMAMKVWKCEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSS 434
+ MA+K+W + EA +Y +M+ GI+
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 475
Query: 435 TLSKLKHRLV-KGRKE 449
S+LK L+ +GRK+
Sbjct: 476 MFSRLKQTLLDEGRKD 491
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 197/429 (45%), Gaps = 6/429 (1%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+E L++ + ++ + + +VL+ A +FF WA R H ++N ++ +L K
Sbjct: 148 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAK 207
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
F+ M + M + GL+++ TF ++ AA A+ FE+M+ Y+ V
Sbjct: 208 TRQFETMVSVLEEMGTK-GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 266
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVI 211
+N L+ ++ EA +K+ P+ TY +L+ GW R N + A + +M I
Sbjct: 267 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM-I 325
Query: 212 ESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHD 271
+ G P + A++ L L++ +A+K F M+ + P +R Y + K
Sbjct: 326 DHGLKP-DIVAHNVMLEGLLRSMKK-SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 272 VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTY 331
+ A +++ M+ + LQP ++Y ++ + L+T +++ +M +G PD TY
Sbjct: 384 METAIEYFDDMV--DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 332 NLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVE 391
N + + + + +R++++M++NE P + ++ Y R+ M VW ++
Sbjct: 442 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 501
Query: 392 HYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEFL 451
+++ EA +Y E+M+ +G+K +K +G + +
Sbjct: 502 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 561
Query: 452 YEELLRKWK 460
+EEL ++ K
Sbjct: 562 FEELAQRAK 570
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 197/429 (45%), Gaps = 6/429 (1%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+E L++ + ++ + + +VL+ A +FF WA R H ++N ++ +L K
Sbjct: 147 MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAK 206
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
F+ M + M + GL+++ TF ++ AA A+ FE+M+ Y+ V
Sbjct: 207 TRQFETMVSVLEEMGTK-GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVET 265
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVI 211
+N L+ ++ EA +K+ P+ TY +L+ GW R N + A + +M I
Sbjct: 266 INCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM-I 324
Query: 212 ESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHD 271
+ G P + A++ L L++ +A+K F M+ + P +R Y + K
Sbjct: 325 DHGLKP-DIVAHNVMLEGLLRSMKK-SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 272 VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTY 331
+ A +++ M+ + LQP ++Y ++ + L+T +++ +M +G PD TY
Sbjct: 383 METAIEYFDDMV--DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
Query: 332 NLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVE 391
N + + + + +R++++M++NE P + ++ Y R+ M VW ++
Sbjct: 441 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 500
Query: 392 HYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEFL 451
+++ EA +Y E+M+ +G+K +K +G + +
Sbjct: 501 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEI 560
Query: 452 YEELLRKWK 460
+EEL ++ K
Sbjct: 561 FEELAQRAK 569
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 6/331 (1%)
Query: 44 TQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAI 102
T N V VLK ++ A++FF + H + H S++L +D+ + L +W I
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 103 NSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSG 162
+ M S TFA V Y +AG P A+ F M + C +D+ + NT++ +C
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 163 GKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPA 222
+ +AY+ + ++ D TY +++ GW A E EMV E G +P N
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV-ERGINP-NLTT 232
Query: 223 YDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVM 282
Y++ L + IR A +FF M+ R C + Y + +++ A ++ M
Sbjct: 233 YNTMLKGFFRAGQ-IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 283 LGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGR 342
+ + + P+ + YN+M+ + +++E A M ++MV RG P+ TYN++ R L
Sbjct: 292 I--REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 343 KLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
+ + M C P+ + IR Y
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 187/421 (44%), Gaps = 8/421 (1%)
Query: 27 TPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVV 86
P +E L RV+ N VE VLK ++ A +FF WA H+ S++++V
Sbjct: 50 NPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILV 109
Query: 87 DVLGKNLLFDAMWD-AINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRC 145
++LG + F +WD I + IS F VF +Y A LP +A F M +
Sbjct: 110 EILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGI 169
Query: 146 VRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKE 204
V L+ L+ ++C A ++ K I P TY+IL+ GW R +A GA++
Sbjct: 170 KPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARK 229
Query: 205 TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALE 264
F EM+ + + AY++ L L K D + K F M + P + +
Sbjct: 230 VFDEMLERNC--VVDLLAYNALLDALCKSGD-VDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 265 QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
DV A + M ++ L P +N ++ + ++ A ++D+M+ +GA
Sbjct: 287 AYCDAGDVHSAYKVLDRM--KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA 344
Query: 325 FPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMK 384
PD+ TYN + + ++ A+++ S M + +C+PD+ + +++ + A +
Sbjct: 345 NPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATE 404
Query: 385 VWKCEVEH-YRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRL 443
+W+ E + + EA +Y E MI GI S+T+ L++RL
Sbjct: 405 IWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRL 464
Query: 444 V 444
V
Sbjct: 465 V 465
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 20/379 (5%)
Query: 18 QTLFEIIS-TTPSVAVEKALEDSGIRVTQNDVEDVLK---LSYDIPSHAVKFFRWAGHRL 73
+T+F +I+ + V ++++L SGI ++++ ++ VLK S+ P ++F+R+A
Sbjct: 43 ETVFRMINGSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIR 102
Query: 74 LHDHTPYSWNLVVDVLGKNLLFDAMWDA-INSMAKRPGLISLATFASVFGSYVAAGLPGD 132
H+ +S + ++ +LG+N FD +W+ I + K LIS T V G
Sbjct: 103 GFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQ 162
Query: 133 AISTFEVMENYRCVRD---VVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAIL 189
+ +F + R V D N L+ +C +A + +K + +PD T+ IL
Sbjct: 163 TVESFWKFK--RLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNIL 220
Query: 190 MEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRD 249
+ GW+ A E G P + Y+S + K + I +A K D MR+
Sbjct: 221 LSGWKSSEEAEAFFEEMKG----KGLKP-DVVTYNSLIDVYCKDRE-IEKAYKLIDKMRE 274
Query: 250 RRCYPGLRFYKAALEQC-VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHND 308
P + Y + + + E E+ ++ P + YN+ + +
Sbjct: 275 EEETPDVITYTTVIGGLGLIGQPDKAREVLKEM---KEYGCYPDVAAYNAAIRNFCIARR 331
Query: 309 LETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDA 368
L A K++D+MV +G P++ TYNL FR L L + ++ M+ NEC+P+ +C
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 369 AIRIYLDNRDAFMAMKVWK 387
I+++ + MAM++W+
Sbjct: 392 LIKMFKRHEKVDMAMRLWE 410
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 185/431 (42%), Gaps = 35/431 (8%)
Query: 32 VEKALEDSGIRVTQNDVEDVL-KLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
+EKAL++S + +T V +L +L Y+ + A +FF WAGH+ + H P ++N ++D+L
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKT-AFRFFTWAGHQEHYSHEPIAYNEMIDILS 170
Query: 91 ----KNLLFDAMWDAINSMAKRPGLISLA-TFASVFGSYVAAGLPGDAISTFEVMENYRC 145
KN F + D ++ M + + L + Y L + F + R
Sbjct: 171 STKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRIRV 228
Query: 146 VR--DVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAK 203
++ A N L+ A+C G E L+ ++ ++PD +T+ +L GW R + A
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 204 ETFAEMVIESGWDPTN---EPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCY---PGLR 257
+ EM IE+G P N A D+F + EA FD M + P +
Sbjct: 289 KLLEEM-IEAGHKPENFTYCAAIDTFC-----QAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGR--KTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+ + K+ AE +E ++GR T P S Y ++ ++ A K
Sbjct: 343 TFALMIVALAKNDK---AEECFE-LIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLD 375
+D+M +G PD +TYN R L + RK +A +++ MV++ C P + I ++ +
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 376 NRDAFMAMKVWKCEVEHYRRDL---EDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLT 432
D A W E +RD +T EA E+++ +G+KL
Sbjct: 459 MDDPDGAFNTW---TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Query: 433 SSTLSKLKHRL 443
RL
Sbjct: 516 YRVFDSFLMRL 526
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 8/340 (2%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
V K L + VT++ V VL+ + + A FF WA + + H+ +++N +VDVLGK
Sbjct: 119 VVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGK 178
Query: 92 NLLFDAMWDAINSMAK--RPGLISLATFASVFGSYVAAGLPGDAISTFEVME-NYRCVRD 148
FD MW+ +N M K L++L T + V +G A+ F ME +Y D
Sbjct: 179 CRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTD 238
Query: 149 VVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
+A+N+LM A+ A++ + I+PD T+ IL+ G+ + A+
Sbjct: 239 TIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDL 298
Query: 209 MVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
M + + + P + Y SF+ K D R + + MR+ C P + Y + K
Sbjct: 299 MKV-TEFTP-DVVTYTSFVEAYCKEGD-FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGK 355
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
V A +E M ++ P Y+S++ + + A ++ +DM +G D
Sbjct: 356 SKQVAEALGVYEKM--KEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDV 413
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDA 368
L YN M + + A R+ M E PN +
Sbjct: 414 LVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 148/365 (40%), Gaps = 38/365 (10%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+E AL +SGI + + VL D + +FF WA + + H+ +V +L K
Sbjct: 84 LELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSK 143
Query: 92 NLLFDAMWDAINSMAK-RPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
F A+W I M K P LI F + + +A + A+ + M Y D
Sbjct: 144 MRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEY 203
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
L+ A+C G EA +D++++ P+ + L+ GW REG + AKE +M
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 211 IESGWDP-----TN--------------------------EP---AYDSFLCTLIKGPDG 236
E+G +P TN EP Y + L +
Sbjct: 264 -EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 237 IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
+ EA++ F M C + Y A + K + + M RK + P+ Y
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM--RKKGVMPSQVTY 380
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
++ + E ++++ M RG PD L YN++ R K ++++A R+++EM
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 357 NECVP 361
N P
Sbjct: 441 NGLSP 445
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 11/354 (3%)
Query: 36 LEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLF 95
LE+ ++ + V ++L + A FF WAG + + + ++ ++ +LGK F
Sbjct: 118 LEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKF 177
Query: 96 DAMWDAINSMAK-RPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNT 154
D W I+ M K P L++ T + Y A G AI+TF + ++ + +
Sbjct: 178 DTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQS 237
Query: 155 LMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESG 214
L+SA+C +A + K + D ++ I++ GW N +G+ + +E G
Sbjct: 238 LLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGW---CNVIGSPREAERVWMEMG 294
Query: 215 WDPTNEP--AYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
+Y S + KG + + +K FD M+ P + Y A + K V
Sbjct: 295 NVGVKHDVVSYSSMISCYSKG-GSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
A + M K ++P YNS++ E A+++ D+M+ +G FP TY+
Sbjct: 354 SEARNLMKTMEEEKG-IEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVW 386
R L G ++ + + ++M K C P IR RD + +W
Sbjct: 413 AFMRILRTGEEVFE---LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLW 463
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 16/254 (6%)
Query: 112 ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDY 171
I L + +V GS P +A + M N DVV+ ++++S GG +
Sbjct: 271 IVLNGWCNVIGS------PREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 172 LQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL 230
+KKE I PD Y ++ + A+ M E G +P N Y+S + L
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEP-NVVTYNSLIKPL 383
Query: 231 IKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG-RKTTL 289
K EA + FD M ++ +P +R Y A + +R E +E++ RK
Sbjct: 384 CKARK-TEEAKQVFDEMLEKGLFPTIRTYHAFM------RILRTGEEVFELLAKMRKMGC 436
Query: 290 QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASR 349
+PT Y ++ D + + D+M + PD +Y +M L K+ +A
Sbjct: 437 EPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYG 496
Query: 350 VFSEMVKNECVPDQ 363
+ EM P++
Sbjct: 497 YYKEMKDKGMRPNE 510
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 161/380 (42%), Gaps = 28/380 (7%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSM-AKRPGLISLATFASV 120
A++FF W HT ++N V+D+LGK F+ W IN M + + TF V
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 121 FGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR 180
F YV A L +AI ++ ++++ +RD + L+ A+C +EA + K +
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFN-LRDETSFYNLVDALCEHKHVVEAEELC--FGKNVI 180
Query: 181 PDG------DTYAILMEGWEREGNAVGAKETFAEMVIES-GWDPTNEPAYDSFLCTLIKG 233
+G + +++ GW + G KE + +M E D + Y +C K
Sbjct: 181 GNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKP 240
Query: 234 PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
+AVK + M+ RR + Y + V + M R+ +P
Sbjct: 241 ----WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM--RERGCEPNV 294
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
+ +N+++ L + A +M+D+M RG PDS+TY +F L K ++ +F
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS---LFGR 351
Query: 354 MVKNECVPDQPNCDAAIRIYLDNRDAFM--AMKVWKCEVEHYRRDLEDTA--NXXXXXXX 409
M+++ P +R + R F+ + VWK E D D+A N
Sbjct: 352 MIRSGVRPKMDTYVMLMRKF--ERWGFLQPVLYVWKTMKES--GDTPDSAAYNAVIDALI 407
Query: 410 XXXXXPEAVKYAEDMIGRGI 429
A +Y E+MI RG+
Sbjct: 408 QKGMLDMAREYEEEMIERGL 427
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 37/328 (11%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVF 121
A+ +WA H H+ ++++ VD+LGK +D M + + M + L++L T A +
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-RGDKLVTLNTVAKIM 162
Query: 122 GSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRP 181
+ AG +A+ F+ + + ++ ++N L+ +C + +A L +K I P
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP 222
Query: 182 DGDTYAILMEGWEREGNAVGAKETFAEMV------------------------------- 210
+ T+ I + GW + A T EM
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 211 --IESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
+E+ P N Y + + +L EA++ M+ C P FY + +
Sbjct: 283 SEMEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG-AFPD 327
+ AE + V + + + TS YNSM+A+Y +H++ + A +++ +M PD
Sbjct: 342 AGRLEEAERVFRVEMP-ELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMV 355
TY + R K + + ++ EMV
Sbjct: 401 VHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 37/328 (11%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVF 121
A+ +WA H H+ ++++ VD+LGK +D M + + M + L++L T A +
Sbjct: 104 ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERM-RGDKLVTLNTVAKIM 162
Query: 122 GSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRP 181
+ AG +A+ F+ + + ++ ++N L+ +C + +A L +K I P
Sbjct: 163 RRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP 222
Query: 182 DGDTYAILMEGWEREGNAVGAKETFAEMV------------------------------- 210
+ T+ I + GW + A T EM
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 211 --IESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
+E+ P N Y + + +L EA++ M+ C P FY + +
Sbjct: 283 SEMEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG-AFPD 327
+ AE + V + + + TS YNSM+A+Y +H++ + A +++ +M PD
Sbjct: 342 AGRLEEAERVFRVEMP-ELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMV 355
TY + R K + + ++ EMV
Sbjct: 401 VHTYQPLLRSCFKRGDVVEVGKLLKEMV 428
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 14/344 (4%)
Query: 26 TTPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSH----AVKFFRWAGHRLLHDHTPYS 81
+ SV E + SG+ V + V + LSYD + A +FF W+G + HT S
Sbjct: 92 NSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNS 151
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
++L++ + + + AMW ++ M + + TF + S AGL A+ F +
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSK 211
Query: 142 --NYRCVRDVVALNTLMSAVCSGGK-TLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGN 198
NYR + + N +++++ + L + Y Q ++ PD TY IL+ R G
Sbjct: 212 TFNYRPFKH--SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
F EM G+ P + Y+ L L KG + A+ + M++ P +
Sbjct: 270 MDRFDRLFDEMA-RDGFSP-DSYTYNILLHILGKGNKPL-AALTTLNHMKEVGIDPSVLH 326
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
Y ++ + ++ ++F + M+ K +P Y M+ Y +L+ A++M +
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMV--KAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
M +G P+ TYN M R L + R+A + EM C P+
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 131/318 (41%), Gaps = 40/318 (12%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVF 121
A++FF W DH + + +L K F +WD + +++R ++ T AS+
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 122 GSYVAAGLPG---DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEA---YDYLQDV 175
G G +A++TF M+ Y C DV A NT+++A+C G +A D +Q
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 176 KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPD 235
PD TY IL+ + R G G ++ + W
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRM----W-------------------- 265
Query: 236 GIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
EA + F M R P + Y ++ C K + + A +E M + P
Sbjct: 266 ---EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV--PNQVT 320
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRG-AFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
YNS + Y N++E A +MM M G P S TY + L++ R+ +A + EM
Sbjct: 321 YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 355 VKNECVPDQPN----CDA 368
V+ VP + CDA
Sbjct: 381 VEAGLVPREYTYKLVCDA 398
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 233 GPDG-IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
G +G ++EA+ F M++ C P + Y + + + + A F + M P
Sbjct: 176 GEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPP 235
Query: 292 TTSMYNSMLALYFYHNDLETARK-----------MMDDMVYRGAFPDSLTYNLMFRFLIK 340
T Y +++ Y + RK M +M++RG PD +TYN + K
Sbjct: 236 DTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295
Query: 341 GRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
++ A +F +M CVP+Q ++ IR Y
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 163/381 (42%), Gaps = 20/381 (5%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLI-SLATFASVFGSYVAAGLPGDAISTFEV 139
+WN ++ V G+N + D+ + KR G + TF ++ +Y G A++ +
Sbjct: 456 TWNTLLAVFGQNGM-DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGN 198
M + D+ NT+++A+ GG ++ L +++ +P+ TY L+ + G
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGK 573
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
+G + AE V +P L + D + EA + F +++R P +
Sbjct: 574 EIGLMHSLAEEVYSGVIEP--RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
+ + + V A + M R T P+ + YNS++ ++ D + +++ +
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFT--PSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRD 378
++ +G PD ++YN + + ++RDASR+FSEM + VPD + I Y +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 379 AFMAMKVWKCEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSK 438
A+ V + ++H R ++T N EA + ED L
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED------------LRN 797
Query: 439 LKHRLVKGRKEFLYEELLRKW 459
L KG L E +++KW
Sbjct: 798 LDPHAPKGEDLRLLERIVKKW 818
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 129/295 (43%), Gaps = 26/295 (8%)
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+++L +++ I SM + G +S A A++F GL D S DV
Sbjct: 168 QSMLDNSVVAIIISMLGKEGRVSSA--ANMFN-----GLQEDGFSL-----------DVY 209
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
+ +L+SA + G+ EA + + ++++ +P TY +++ + + G + E
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
+ G P + Y++ L T K +EA + F+ M+ Y A L+ K
Sbjct: 270 MKSDGIAP-DAYTYNT-LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 270 HDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
H + A + E++L P+ YNS+++ Y L+ A ++ + M +G PD
Sbjct: 328 HRPKEAMKVLNEMVL---NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAM 383
TY + + K+ A +F EM C P+ +A I++Y NR F M
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY-GNRGKFTEM 438
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 12/283 (4%)
Query: 108 RPGLISLATFASVFGSYVAAGLPGDAISTF-EVMENYRCVRDVVALNTLMSAVCSGGKTL 166
+P LI+ +VFG G P + I++ E M++ D NTL++ G
Sbjct: 240 KPTLITYNVILNVFGK---MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 167 EAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS 225
EA +++K D TY L++ + + A + EMV+ +G+ P+ Y+S
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL-NGFSPS-IVTYNS 354
Query: 226 FLCTLIKGPDG-IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG 284
+ + DG + EA++ + M ++ P + Y L + V A +E M
Sbjct: 355 LISAYAR--DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-- 410
Query: 285 RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
R +P +N+ + +Y K+ D++ G PD +T+N + +
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ S VF EM + VP++ + I Y AM V++
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 168/420 (40%), Gaps = 8/420 (1%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+E AL +SG+ + +E VL D + +FF WA + + H+ + +V +L K
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 92 NLLFDAMWDAINSMAKR-PGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
F A+W I M K P LI F + + +A + AI + M + D
Sbjct: 160 MRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEY 219
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
L+ A+C G +A +D++ + + L+ GW R G + AK +M
Sbjct: 220 VFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 211 IESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDH 270
E+G++P + Y + L + +A MR R P Y ++ K
Sbjct: 280 -EAGFEP-DIVDYTNLLSGYANAGK-MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 271 DVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLT 330
RM E + + + Y ++++ + ++ ++DDM+ +G P LT
Sbjct: 337 --RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELT 394
Query: 331 YNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEV 390
Y + K + + +M + E PD + IR+ + A+++W
Sbjct: 395 YMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEME 454
Query: 391 EHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSS--TLSKLKHRLVKGRK 448
E+ DT EA + ++M+ RG+ S TL L + ++K +K
Sbjct: 455 ENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKK 514
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 12/282 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ +VV+ L K D ++ +N M + F ++ S DA++ F+ M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E +VV ++L+S +CS G+ +A L D ++K+I P+ T+ L++ + +EG
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
V A++ +M I+ DP + Y+S LI G D + +A + F+ M + C+P L
Sbjct: 272 VEAEKLHDDM-IKRSIDP-DIFTYNS----LINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y ++ K V + M R L T Y +++ F+ D + A+K+
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
MV G PD +TY+++ L KL A VF M K+E
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 143/354 (40%), Gaps = 43/354 (12%)
Query: 71 HRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLP 130
RL H Y++N++++ + + M K S+ T +S+ Y
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 131 GDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAIL 189
DA++ + M D + TL+ + K EA + + V++ +P+ TY ++
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 190 MEGWEREG---------NAVGAKETFAEMVI------------------------ESGWD 216
+ G + G N + A + A++VI E+
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 217 PTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVR 273
N Y S LC+ + D A + M +++ P L + A ++ VK+
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSD----ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 274 MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNL 333
AE + M+ R ++ P YNS++ + H+ L+ A++M + MV + FPD TYN
Sbjct: 273 EAEKLHDDMIKR--SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 334 MFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ + K +++ D + +F EM V D I+ + D A KV+K
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 8/263 (3%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++ M +R +L T+ V G A + ME + DVV NT++ ++C
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 162 GGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
+A + ++++ K IRP+ TY+ L+ G A + ++M IE +P N
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINP-NL 255
Query: 221 PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFW 279
+++ + +K + EA K D M R P + Y + + C+ D + A+ +
Sbjct: 256 VTFNALIDAFVKEGKFV-EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR-LDKAKQMF 313
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
E M+ + P YN+++ + +E ++ +M +RG D++TY + + L
Sbjct: 314 EFMVSKDCF--PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 340 KGRKLRDASRVFSEMVKNECVPD 362
+A +VF +MV + PD
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPD 394
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 130/329 (39%), Gaps = 28/329 (8%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDHTP-------YSWNLV 85
K +E GIR +V+ S + S + RW+ +LL D ++N +
Sbjct: 209 KEMETKGIR------PNVVTYS-SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 86 VDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRC 145
+D K F + M KR + T+ S+ + A FE M + C
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 146 VRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKE 204
D+ NTL+ C + + + +++ + + D TY L++G +G+ A++
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 205 TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALE 264
F +MV S P + Y L L + +A++ FD M+ + Y +E
Sbjct: 382 VFKQMV--SDGVPPDIMTYSILLDGLCNNGK-LEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 265 QCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
K V + F + L ++P YN+M++ L+ A ++ M G
Sbjct: 439 GMCKAGKVDDGWDLFCSLSL---KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFS 352
PDS TYN + R LRD + S
Sbjct: 496 PLPDSGTYNTLIR-----AHLRDGDKAAS 519
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 49/337 (14%)
Query: 82 WNLVVDVLGKNLLFD---AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFE 138
+N ++D L K D ++ + + RP +++ ++ S SY G DA
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY---GRWSDASQLLS 244
Query: 139 VMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREG 197
M + ++V N L+ A GK +EA D +K+ I PD TY L+ G+
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYP 254
AK+ F MV + + P D++ TLIKG + + + F M R
Sbjct: 305 RLDKAKQMFEFMVSKDCF-----PDLDTY-NTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 255 GLRFYKAALEQCVKDHDVRMAEFFWEVM------------------LGRKTTLQPTTSMY 296
Y ++ D D A+ ++ M L L+ ++
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 297 NSM------LALYFYHNDLETARKM--MDD-------MVYRGAFPDSLTYNLMFRFLIKG 341
+ M L +Y Y +E K +DD + +G P+ +TYN M L
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 342 RKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRD 378
R L++A + +M ++ +PD + IR +L + D
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++ VV+ L K D + M K + + ++ + DA++ F
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGN 198
M+N +VV N+L+ +C+ G+ +A L D ++++I P+ T++ L++ + +EG
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKG---PDGIREAVKFFDSMRDRRCYP 254
V A++ + EM I+ DP D F +LI G D + EA F+ M + C+P
Sbjct: 341 LVEAEKLYDEM-IKRSIDP------DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 255 GLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETAR 313
+ Y ++ K V E F E+ + L T YN+++ F D + A+
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREM---SQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 314 KMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
K+ MV G PD +TY+++ L K KL A VF + K++ PD
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 130/295 (44%), Gaps = 15/295 (5%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +P + TF ++ +A++ + M C D+ T++
Sbjct: 171 ALVDQMFVMEYQPNTV---TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G A L+ ++K +I D Y +++ N A F EM G
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD-NKGI 286
Query: 216 DPTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
P N Y+S LC + D A + M +R+ P + + A ++ VK+ +
Sbjct: 287 RP-NVVTYNSLIRCLCNYGRWSD----ASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
AE ++ M+ R ++ P Y+S++ + H+ L+ A+ M + M+ + FP+ +TYN
Sbjct: 342 VEAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ + K +++ + +F EM + V + + I+ D MA K++K
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 34/307 (11%)
Query: 67 RWA-GHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAI-------------NSMAKRPGLI 112
RW+ RLL D N V + F A+ DA + M KR
Sbjct: 305 RWSDASRLLSDMIERKINPNV------VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
+ T++S+ + +A FE+M + C +VV NTL+ C + E +
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 173 QDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+++ ++ + + TY L++G + G+ A++ F +MV S P + Y L L
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV--SDGVPPDIITYSILLDGLC 476
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTT-LQ 290
K + +A+ F+ ++ + P + Y +E K V E W++ ++
Sbjct: 477 K-YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV---EDGWDLFCSLSLKGVK 532
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P +Y +M++ + E A + +M G P+S TYN + R +LRD +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR-----ARLRDGDKA 587
Query: 351 FS-EMVK 356
S E++K
Sbjct: 588 ASAELIK 594
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 41/240 (17%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+V L++L++ C G + EA + Q E +P+ T+ L+ G A
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA------- 201
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
EAV D M R C P L Y +
Sbjct: 202 -------------------------------SEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
K D+ +A + M K ++ +Y +++ + ++ A + +M +G P
Sbjct: 231 CKRGDIDLALSLLKKM--EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVW 386
+ +TYN + R L + DASR+ S+M++ + P+ A I ++ A K++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 14/287 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ V++ L K D + +N M K + +++V S DA++ F M
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
+N DV ++L+S +C+ G+ +A L D ++++I P+ T+ L++ + +EG
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
+ A++ F EM I+ DP N Y+S LI G D + EA + F M + C P +
Sbjct: 327 IEAEKLFDEM-IQRSIDP-NIVTYNS----LINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 257 RFYKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
Y + C V E F ++ + L T Y +++ +F +D + A+ +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDM---SRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
MV G P+ +TYN + L K KL A VF + K++ PD
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 132/313 (42%), Gaps = 8/313 (2%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H Y++N++++ L + + M K S+ T S+ + +A++
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWER 195
+ M D V TL+ + K EA ++ V K +PD TY ++ G +
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
G A +M E G + Y + + +L K + +A+ F M ++ P
Sbjct: 218 RGEPDLALNLLNKM--EKGKIEADVVIYSTVIDSLCKYRH-VDDALNLFTEMDNKGIRPD 274
Query: 256 LRFYKAALEQCVKDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ F ++L C+ ++ A ML RK + P +NS++ + L A K
Sbjct: 275 V-FTYSSLISCLCNYGRWSDASRLLSDMLERK--INPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
+ D+M+ R P+ +TYN + +L +A ++F+ MV +C+PD + I +
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 375 DNRDAFMAMKVWK 387
+ M++++
Sbjct: 392 KAKKVVDGMELFR 404
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 125/294 (42%), Gaps = 13/294 (4%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +P + TF ++ +A++ E M C D+V ++
Sbjct: 156 ALVDQMVEMGYQPDTV---TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G+ A + L ++K +I D Y+ +++ + + A F EM G
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD-NKGI 271
Query: 216 DPT--NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVR 273
P + S LC + D A + M +R+ P + + + ++ K+ +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSD----ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 274 MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNL 333
AE ++ M+ R ++ P YNS++ + H+ L+ A+++ MV + PD +TYN
Sbjct: 328 EAEKLFDEMIQR--SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 334 MFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ K +K+ D +F +M + V + I + D A V+K
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 139/332 (41%), Gaps = 29/332 (8%)
Query: 36 LEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDH-------TPYSWNLVVD 87
+++ GIR DV S + S + RW+ RLL D ++N ++D
Sbjct: 266 MDNKGIR------PDVFTYS-SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 88 VLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVR 147
K + M +R ++ T+ S+ + +A F +M + C+
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
DVV NTL++ C K ++ + +D+ ++ + + TY L+ G+ + + A+ F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
+MV G P N Y++ L L K + +A+ F+ ++ + P + Y E
Sbjct: 439 KQMV-SDGVHP-NIMTYNTLLDGLCKNGK-LEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 267 VKDHDVRMAEFFWEVMLGRKTT-LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF 325
K V E W++ ++P YN+M++ + E A + M G
Sbjct: 496 CKAGKV---EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 326 PDSLTYNLMFRFLIKGRKLRDASRVFS-EMVK 356
PDS TYN + R LRD + S E++K
Sbjct: 553 PDSGTYNTLIR-----AHLRDGDKAASAELIK 579
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 41/343 (11%)
Query: 59 PSHAVKFFRWAGHRLLHDHTPYSWNL-----VVDVLGKNLLFDAMWDAINSMAKRPGLI- 112
PS A+K FR + P+ ++L ++ LG + +FD + + + ++
Sbjct: 22 PSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVP 81
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
+ F +V + LP A+ F+ M YRC R V +LN+L+SA+ G+ + + L
Sbjct: 82 TEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERL 141
Query: 173 QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
+ + +PD TY IL+ G + G A + F EMV + PT + + + L K
Sbjct: 142 SSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMV-KKKVKPTG-VTFGTLIHGLCK 199
Query: 233 GPD---------------GIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
G+R V + S+ C G + L+ + +++
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 278 FWEVML------GRKTTL------------QPTTSMYNSMLALYFYHNDLETARKMMDDM 319
+ ++ GR + +P T YN ++ + ND E+A +++D+M
Sbjct: 260 IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
V +G PD ++YN++ + +K +A+ +F +M + C PD
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPD 362
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 80 YSWNLVVDVLGKNLLFDAMW---DAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
++ NL+V L K ++ + D I SM P L+ T+ ++ G YVA G A
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLV---TYTTILGGYVARGDMESAKRV 248
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWER 195
E M + D LM C G+ EA + D++K EI P+ TY +++ +
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
E + A+ F EM +E + P DS LC K D + E D D C G
Sbjct: 309 EKKSGEARNMFDEM-LERSFMP------DSSLCC--KVIDALCE-----DHKVDEAC--G 352
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ-----------PTTSMYNSMLALYF 304
L + K C+ D+ + W GR T + P+ YN+++A
Sbjct: 353 L-WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMC 411
Query: 305 YHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+L A ++ DDM R P++ TYN++ L K +++ RV EM++ C P++
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 40/257 (15%)
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNA 199
E++ ++ N L+ A+C AY L ++ + P+ TY ++ G+ G+
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 200 VGAKETFAEMVIESGWDP----------------------------------TNEPAYDS 225
AK EM ++ GW P NE Y
Sbjct: 243 ESAKRVLEEM-LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 226 FLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGR 285
+ L K EA FD M +R P ++ +DH V A W ML
Sbjct: 302 MIRALCKEKKS-GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML-- 358
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
K P ++ ++++ + ARK+ D+ +G+ P LTYN + + + +L
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELT 417
Query: 346 DASRVFSEMVKNECVPD 362
+A R++ +M + +C P+
Sbjct: 418 EAGRLWDDMYERKCKPN 434
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 6/166 (3%)
Query: 226 FLCTLIKGP----DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEV 281
F C L+ + I A K D + P L Y L V D+ A+ E
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 282 MLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKG 341
ML R P + Y ++ Y A +MDDM P+ +TY +M R L K
Sbjct: 252 MLDR--GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 342 RKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+K +A +F EM++ +PD C I ++ A +W+
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR 355
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 20/289 (6%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAK---RPGLISLATFASVFGSYVAAGLPGDAISTF 137
++ +VV+ L K D ++ +N M + PG++ T Y DA++ F
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD---DALNLF 279
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWERE 196
+ ME +VV ++L+S +C+ G+ +A L D ++++I PD T++ L++ + +E
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCY 253
G V A++ + EMV S DP+ Y S LI G D + EA + F+ M + C+
Sbjct: 340 GKLVEAEKLYDEMVKRS-IDPS-IVTYSS----LINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 254 PGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
P + Y ++ K V E F E+ + L T YN ++ F D + A
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREM---SQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
+++ +MV G P+ +TYN + L K KL A VF + +++ P
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 35/337 (10%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDHTP-------YSWNLV 85
K +E GIR +V+ S + S + RW+ RLL D ++++ +
Sbjct: 280 KEMETKGIR------PNVVTYS-SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 86 VDVL---GKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMEN 142
+D GK + + ++D M KR S+ T++S+ + +A FE M +
Sbjct: 333 IDAFVKEGKLVEAEKLYD---EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 143 YRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVG 201
C DVV NTL+ C + E + +++ ++ + + TY IL++G + G+
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 202 AKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKA 261
A+E F EMV S P N Y++ L L K + +A+ F+ ++ + P + Y
Sbjct: 450 AQEIFKEMV--SDGVPPNIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 262 ALEQCVKDHDVRMAEFFWEVMLGRKTT-LQPTTSMYNSMLALYFYHNDLETARKMMDDMV 320
+E K V E W++ ++P YN+M++ + E A + +M
Sbjct: 507 MIEGMCKAGKV---EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 321 YRGAFPDSLTYNLMFRFLIKGRKLRDASRVFS-EMVK 356
G P+S YN + R +LRD R S E++K
Sbjct: 564 EDGTLPNSGCYNTLIR-----ARLRDGDREASAELIK 595
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 115 ATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD 174
TF ++ +A++ + M C D+V +++ +C G T A++ L
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 175 VKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSF---LCTL 230
+++ ++ P Y +++G + + A F EM + G P N Y S LC
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRP-NVVTYSSLISCLCNY 304
Query: 231 IKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ 290
+ D A + M +R+ P + + A ++ VK+ + AE ++ M+ R ++
Sbjct: 305 GRWSD----ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR--SID 358
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P+ Y+S++ + H+ L+ A++M + MV + FPD +TYN + + K +++ + V
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 351 FSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
F EM + V + + I+ D MA +++K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 14/263 (5%)
Query: 100 DAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAV 159
D M +R S+ ++ V S G DA+S F ME DVV ++L+ +
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 160 CSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPT 218
C+ GK + L++ + + I PD T++ L++ + +EG + AKE + EM I G P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-ITRGIAP- 348
Query: 219 NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK----DHDVRM 274
+ Y+S + K + + EA + FD M + C P + Y + K D +R+
Sbjct: 349 DTITYNSLIDGFCK-ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
F E+ L P T YN+++ + L A+++ +MV RG P +TY ++
Sbjct: 408 ---FREI---SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 335 FRFLIKGRKLRDASRVFSEMVKN 357
L +L A +F +M K+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKS 484
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 121/268 (45%), Gaps = 11/268 (4%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +RP L++++T + G +A+ + M Y D V ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVST---LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 157 SAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIES-G 214
+ +C G + A D + ++ + I+ Y+I+++ ++G+ A F EM ++
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 215 WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRM 274
D + LC K DG K M R P + + A ++ VK+ +
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDG----AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
A+ + M+ R + P T YNS++ + N L A +M D MV +G PD +TY+++
Sbjct: 334 AKELYNEMITRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 335 FRFLIKGRKLRDASRVFSEMVKNECVPD 362
K +++ D R+F E+ +P+
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPN 419
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 40/348 (11%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVF 121
A+ FR R + + +++V+D L K+ FD N M + + T++S+
Sbjct: 229 ALDLFRKMEERNIK-ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 122 GSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIR 180
G G D M + DVV + L+ GK LEA + Y + + + I
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 181 PDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP---TNEPAYDSFLCTLIKGPDGI 237
PD TY L++G+ +E A + F ++++ G +P T +S+ C + DG+
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCEPDIVTYSILINSY-CKAKRVDDGM 405
Query: 238 R-------------------------------EAVKFFDSMRDRRCYPGLRFYKAALEQC 266
R A + F M R P + Y L+
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
+ ++ A +E M + TL +YN ++ + ++ A + + +G P
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLG--IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
D +TYN+M L K L +A +F +M ++ C PD + IR +L
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 8/249 (3%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QD 174
TF+++ + G +A++ + M + D+V ++TL++ +C G+ EA + +
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 175 VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGP 234
V+ +PD TY ++ + GN+ A + F +M E + Y + +L K
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM--EERNIKASVVQYSIVIDSLCK-- 257
Query: 235 DG-IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
DG +A+ F+ M + + Y + + D M+GR + P
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDV 315
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
+++++ ++ L A+++ ++M+ RG PD++TYN + K L +A+++F
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 354 MVKNECVPD 362
MV C PD
Sbjct: 376 MVSKGCEPD 384
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 10/287 (3%)
Query: 70 GHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGL 129
G ++ D +S ++DV K + N M R T+ S+ +
Sbjct: 308 GRNIIPDVVTFSA--LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 130 PGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAI 188
+A F++M + C D+V + L+++ C + + +++ K + P+ TY
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 189 LMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMR 248
L+ G+ + G AKE F EMV S P + Y L L + + +A++ F+ M+
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMV--SRGVPPSVVTYGILLDGLCDNGE-LNKALEIFEKMQ 482
Query: 249 DRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG-RKTTLQPTTSMYNSMLALYFYHN 307
R G+ Y + V A W + ++P YN M+
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDA---WSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 308 DLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
L A + M G PD TYN++ R + G L + + EM
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 14/287 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ VV+ L K D + +N M ++ +++V S DA++ F M
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
EN +V+ ++L+S +C+ G+ +A L D ++++I P+ T++ L++ + ++G
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
V A++ + EM I+ DP N Y S + C L D + EA + + M + C P +
Sbjct: 340 VKAEKLYEEM-IKRSIDP-NIFTYSSLINGFCML----DRLGEAKQMLELMIRKDCLPNV 393
Query: 257 RFYKAALEQCVKDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
Y + K V + E F E+ + L T Y +++ +F D + A+ +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREM---SQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
MV G P+ LTYN++ L K KL A VF + ++ PD
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 125/295 (42%), Gaps = 15/295 (5%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +P + TF ++ +A++ + M C D+V ++
Sbjct: 169 ALVDQMVEMGYKPDTV---TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G T A + L ++ +I + Y+ +++ + + A F EM G
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME-NKGV 284
Query: 216 DPTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
P N Y S LC + D A + M +R+ P L + A ++ VK +
Sbjct: 285 RP-NVITYSSLISCLCNYGRWSD----ASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
AE +E M+ R ++ P Y+S++ + + L A++M++ M+ + P+ +TYN
Sbjct: 340 VKAEKLYEEMIKR--SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ K +++ +F EM + V + I + RD A V+K
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+V LN+L++ C G + +A + Q V+ +PD T+ L+ G A A
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ- 265
MV + G P + Y + + L K D A+ + M + + Y ++
Sbjct: 207 DRMV-QRGCQP-DLVTYGAVVNGLCKRGD-TDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 266 CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF 325
C H+ F E+ ++P Y+S+++ + A +++ DM+ R
Sbjct: 264 CKYRHEDDALNLFTEM---ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 326 PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
P+ +T++ + +K KL A +++ EM+K P+
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 124/314 (39%), Gaps = 45/314 (14%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H YS+ +++ + + M K S+ T S+ + +A+S
Sbjct: 112 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 171
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSG---GKTLEAYDYLQDVKKEIRPDGDTYAILMEGW 193
+ M+ + V +VV NT+++ +C LE + ++ KK IR D TY L+ G
Sbjct: 172 VDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME--KKGIRADAVTYNTLISGL 229
Query: 194 EREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCY 253
G W +A + M R+
Sbjct: 230 SNSGR----------------WT----------------------DAARLLRDMVKRKID 251
Query: 254 PGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETAR 313
P + F+ A ++ VK+ ++ A ++ M+ R ++ P YNS++ + H L A+
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRR--SVVPNVFTYNSLINGFCIHGCLGDAK 309
Query: 314 KMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
M D MV +G FPD +TYN + K +++ D ++F EM V D + I Y
Sbjct: 310 YMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGY 369
Query: 374 LDNRDAFMAMKVWK 387
+A KV+
Sbjct: 370 CQAGKLNVAQKVFN 383
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 18/234 (7%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILM 190
+A+ F ME D V NTL+S + + G+ +A L+D VK++I P+ + L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 191 EGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL-IKGPDGIREAVKFFDSMRD 249
+ + +EGN + A+ + EM+ S N Y+S + I G G +A FD M
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVV--PNVFTYNSLINGFCIHGCLG--DAKYMFDLMVS 317
Query: 250 RRCYPGLRFYKAALEQCVKDHDVR-----MAEFFWEVMLGRKTTLQPTTSMYNSMLALYF 304
+ C+P + Y + K V E ++ ++G T YN+++ Y
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT-------YNTLIHGYC 370
Query: 305 YHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
L A+K+ + MV G PD +TYN++ L K+ A + ++ K+E
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 12/282 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ +VV+ L K D + +N M + F ++ S DA++ F+ M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E +VV ++L+S +CS G+ +A L D ++K+I P+ T+ L++ + +EG
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
V A++ + +M+ S DP + Y+S L+ G D + +A + F+ M + C+P +
Sbjct: 347 VEAEKLYDDMIKRS-IDP-DIFTYNS----LVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y ++ K V + M R L T Y +++ F+ D + A+K+
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHR--GLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
MV G PD +TY+++ L KL A VF M K+E
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 15/295 (5%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M RP I TF ++ +A++ + M C ++V ++
Sbjct: 176 ALVDQMVEMGYRPDTI---TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G T A + L ++ +I D + +++ + + A F EM E+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM--ETKG 290
Query: 216 DPTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
N Y S LC+ + D A + M +++ P L + A ++ VK+
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSD----ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
AE ++ M+ R ++ P YNS++ + H+ L+ A++M + MV + FPD +TYN
Sbjct: 347 VEAEKLYDDMIKR--SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ + K +++ D + +F EM V D I+ + D A KV+K
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 8/263 (3%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++ M +R +L T+ V G A++ ME + DVV NT++ ++C
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 162 GGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
+A + ++++ K IRP+ TY+ L+ G A + ++M IE +P N
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM-IEKKINP-NL 330
Query: 221 PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFW 279
+++ + +K + EA K +D M R P + Y + + C+ D + A+ +
Sbjct: 331 VTFNALIDAFVKEGKFV-EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR-LDKAKQMF 388
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
E M+ + P YN+++ + +E ++ +M +RG D++TY + + L
Sbjct: 389 EFMVSKDCF--PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 340 KGRKLRDASRVFSEMVKNECVPD 362
+A +VF +MV + PD
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPD 469
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 135/334 (40%), Gaps = 29/334 (8%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDHTP-------YSWNLV 85
K +E GIR +V+ S + S + RW+ +LL D ++N +
Sbjct: 284 KEMETKGIR------PNVVTYS-SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 86 VDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRC 145
+D K F + M KR + T+ S+ + A FE M + C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 146 VRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKE 204
DVV NTL+ C + + + +++ + + D TY L++G +G+ A++
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 205 TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALE 264
F +MV S P + Y L L + +A++ FD M+ + Y +E
Sbjct: 457 VFKQMV--SDGVPPDIMTYSILLDGLCNNGK-LEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 265 QCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
K V + F + L ++P YN+M++ L+ A ++ M G
Sbjct: 514 GMCKAGKVDDGWDLFCSLSL---KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFS-EMVK 356
P+S TYN + R LRD + S E+++
Sbjct: 571 PLPNSGTYNTLIR-----AHLRDGDKAASAELIR 599
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 154/350 (44%), Gaps = 20/350 (5%)
Query: 17 TQTLFEIISTTPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHD 76
++F IS +V V + D + N+ +++ A K + G++L
Sbjct: 136 VHSIFHAISMCDNVCVNSIIADMLVLAYANNSR------FELGFEAFKRSGYYGYKL--- 186
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
L++ +L +N D + M +R ++ TF V + G A
Sbjct: 187 SALSCKPLMIALLKENRSADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 137 FEVMENYRCVRDVVALNTLMSAVC---SGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEG 192
E M+ Y C +VV+ NTL+ C GK +A L++ V+ ++ P+ T+ IL++G
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 193 WEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRC 252
+ ++ N G+ + F EM ++ P N +Y+S + L G I EA+ D M
Sbjct: 306 FWKDDNLPGSMKVFKEM-LDQDVKP-NVISYNSLINGLCNGGK-ISEAISMRDKMVSAGV 362
Query: 253 YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
P L Y A + K+ ++ A + + G+ PTT MYN ++ Y ++
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV--PTTRMYNMLIDAYCKLGKIDDG 420
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ ++M G PD TYN + L + + A ++F ++ ++ +PD
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT-SKGLPD 469
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
+M D + S +P LI T+ ++ + + +A+ F ++ V N L+
Sbjct: 352 SMRDKMVSAGVQPNLI---TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 157 SAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
A C GK + + +++++E I PD TY L+ G R GN AK+ F ++ +
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP 468
Query: 216 DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA 275
D C KG R+A M P Y ++ K+ +++ A
Sbjct: 469 DLVTFHILMEGYCR--KGES--RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 276 EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
+ ++ L+ + YN +L Y LE A ++++M+ +G P+ +TY ++
Sbjct: 525 TNM-RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ D + M +P LI++ T + +G +A+ + M Y C + V +++
Sbjct: 180 LVDRMVEMGHKPDLITINTLVN---GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 158 AVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWD 216
+C G+T A + L+ ++ + I+ D Y+I+++G + G+ A F EM E
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM--EMKGI 294
Query: 217 PTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVR 273
TN Y+ + C + DG K M R+ P + + ++ VK+ +R
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDG----AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 274 MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNL 333
AE + M+ R + P T Y S++ + N L+ A +M+D MV +G P+ T+N+
Sbjct: 351 EAEELHKEMIHR--GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 334 MFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ K ++ D +F +M V D
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVAD 437
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 45/350 (12%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+++++D L K+ D ++ N M + ++ T+ + G + AG D M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAV 200
+ +VV + L+ + GK EA + ++ + + I PD TY L++G+ +E N +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE-NHL 384
Query: 201 GAKETFAEMVIESGWDPTNEPAYDSFL---C----------------------------T 229
++++ G DP N ++ + C T
Sbjct: 385 DKANQMVDLMVSKGCDP-NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 230 LIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFWEVMLGR 285
LI+G + A + F M R+ P + YK L+ C + E F ++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI---E 500
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
K+ ++ +YN ++ + ++ A + + +G P TYN+M L K L
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 346 DASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRR 395
+A +F +M ++ PD + IR +L + DA ++K+ +E +R
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL----IEELKR 606
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 146/348 (41%), Gaps = 21/348 (6%)
Query: 28 PSVAVEKALEDSGIRVTQNDVEDVL-----KLSYDIPSH----AVKFFRWAGHRLLHDHT 78
P + AL++ + ++ V +VL LS+D + A KFF W G + HT
Sbjct: 92 PGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHT 151
Query: 79 PYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFE 138
++L++ + + + AM I+ M K + TF + + AGL D + F
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 139 VME--NYRCVRDVVALNTLMSAVCSGGKTLEAYD--YLQDVKKEIRPDGDTYAILMEGWE 194
+ NYR + + N ++ ++ G K + D Y Q ++ PD TY I+M
Sbjct: 212 KSKTFNYRPYKH--SYNAILHSLL-GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF 268
Query: 195 REGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYP 254
R G EMV + G+ P + Y+ L L G + A+ + MR+ P
Sbjct: 269 RLGKTDRLYRLLDEMV-KDGFSP-DLYTYNILLHHLATGNKPL-AALNLLNHMREVGVEP 325
Query: 255 GLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
G+ + ++ + + ++F + + K P Y M+ Y +LE A +
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETV--KVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
M +M +G P+ TYN M R K ++A + EM C P+
Sbjct: 384 MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 16/237 (6%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILM 190
DA++ F M+N DV ++L+S +C+ G+ +A L D ++++I P+ T++ L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 191 EGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKG---PDGIREAVKFFDS 246
+ + +EG V A++ + EM I+ DP D F +LI G D + EA F+
Sbjct: 336 DAFVKEGKLVEAEKLYDEM-IKRSIDP------DIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 247 MRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFY 305
M + C+P + Y ++ K V E F E+ + L T Y +++ +F
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM---SQRGLVGNTVTYTTLIHGFFQ 445
Query: 306 HNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
D + A+ + MV G P+ LTYN++ L K KL A VF + ++ PD
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 128/294 (43%), Gaps = 13/294 (4%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +P TF ++ +A++ + M C D+V T++
Sbjct: 174 ALVDQMVEMGYKPDTF---TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G A L+ ++K +I D Y +++G + + A F EM G
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD-NKGI 289
Query: 216 DPT--NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVR 273
P + S LC + D A + M +R+ P + + A ++ VK+ +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSD----ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 274 MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNL 333
AE ++ M+ R ++ P Y+S++ + H+ L+ A+ M + M+ + FP+ +TY+
Sbjct: 346 EAEKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 334 MFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ + K +++ + +F EM + V + I + RD A V+K
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 138/338 (40%), Gaps = 41/338 (12%)
Query: 36 LEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDHTPYSWNLVVDVLGKNLL 94
+++ GIR DV S + S + RW+ RLL D N V +
Sbjct: 284 MDNKGIR------PDVFTYS-SLISCLCNYGRWSDASRLLSDMIERKINPNV------VT 330
Query: 95 FDAMWDAI-------------NSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
F A+ DA + M KR + T++S+ + +A FE+M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAV 200
+ C +VV +TL+ C + E + +++ ++ + + TY L+ G+ + +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 201 GAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYK 260
A+ F +MV G P N Y+ L L K + +A+ F+ ++ P + Y
Sbjct: 451 NAQMVFKQMV-SVGVHP-NILTYNILLDGLCKNGK-LAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 261 AALEQCVKDHDVRMAEFFWEVMLGRKTT-LQPTTSMYNSMLALYFYHNDLETARKMMDDM 319
+E K V E WE+ + P YN+M++ + E A ++ M
Sbjct: 508 IMIEGMCKAGKV---EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFS-EMVK 356
G P+S TYN + R +LRD R S E++K
Sbjct: 565 KEDGPLPNSGTYNTLIR-----ARLRDGDREASAELIK 597
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 134/337 (39%), Gaps = 49/337 (14%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAK------RPGLISLATFASVFGSYVAAGLPGDAIS 135
+N ++D L K + M DA+N + RP + + ++ S +Y G DA
Sbjct: 261 YNTIIDGLCK---YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY---GRWSDASR 314
Query: 136 TFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWE 194
M + +VV + L+ A GK +EA Y + +K+ I PD TY+ L+ G+
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 195 REGNAVGAKETFAEMV-----------------------IESGWDPTNEPAYDSFL---- 227
AK F M+ +E G + E + +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 228 --CTLIKGPDGIRE---AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVM 282
TLI G R+ A F M +P + Y L+ K+ + A +E +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 283 LGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR-FLIKG 341
+++T++P YN M+ +E ++ ++ +G P+ + YN M F KG
Sbjct: 495 --QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 342 RKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRD 378
K +A + +M ++ +P+ + IR L + D
Sbjct: 553 SK-EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 21/276 (7%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
+M + + M +P ++ + ++ S G A+S F+ MENY DVV +L+
Sbjct: 163 SMVNQMVEMGIKPDVV---MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 157 SAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C+ G+ +A L+ + K++I+PD T+ L++ + +EG + A+E + EM+ S
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS-- 277
Query: 216 DPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALE---QCVKD 269
N Y S LI G + EA + F M + C+P + Y + + +C K
Sbjct: 278 IAPNIFTYTS----LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
D + F+E+ + L T Y +++ + A+++ MV RG P+
Sbjct: 334 DDA--MKIFYEM---SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIR 388
Query: 330 TYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPN 365
TYN++ L K++ A +F +M K E PN
Sbjct: 389 TYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+V +L++ C G + EA + Q V+ I+PD Y +++ + G+ A F
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
+M G P + Y S + L R+A M R+ P + + A ++
Sbjct: 201 DQME-NYGIRP-DVVMYTSLVNGLCNSGRW-RDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
VK+ AE + M+ + ++ P Y S++ + ++ AR+M M +G FP
Sbjct: 258 VKEGKFLDAEELYNEMI--RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEM 354
D + Y + K +K+ DA ++F EM
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 17/282 (6%)
Query: 81 SWNLVVDVL---GKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
++N ++D GK L + +++ + M+ P + T+ S+ + G +A F
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF---TYTSLINGFCMEGCVDEARQMF 305
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWERE 196
+ME C DVVA +L++ C K +A ++ +K + + TY L++G+ +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKGPDGIREAVKFFDSMRDRR---C 252
G A+E F+ MV S P N Y+ L C G +++A+ F+ M+ R
Sbjct: 366 GKPNVAQEVFSHMV--SRGVPPNIRTYNVLLHCLCYNGK--VKKALMIFEDMQKREMDGV 421
Query: 253 YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
P + Y L + + A +E M RK + Y ++ ++ A
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDM--RKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
+ + +G P+ +TY M L + +A +F +M
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 16/287 (5%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ +VV+ L K D ++ +N M ++ +++V S DA++ F M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
EN +V+ ++L+S +C+ + +A L D ++++I P+ T+ L++ + +EG
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKG---PDGIREAVKFFDSMRDRRCYPG 255
V A++ + EM I+ DP D F +LI G D + EA F+ M + C+P
Sbjct: 347 VEAEKLYDEM-IKRSIDP------DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 256 LRFYKAALEQCVKDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ Y + K + E F E+ + L T Y +++ +F D + A+
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREM---SQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
+ MV G P+ +TYN + L K KL A VF + +++ P
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 142/352 (40%), Gaps = 39/352 (11%)
Query: 71 HRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLP 130
RL H Y++N++++ + + M K S+ T +S+ Y
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 131 GDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAIL 189
DA++ + M D + TL+ + K EA + + V++ +P+ TY ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 190 MEGWEREG---------NAVGAKETFAEMVIES-------------------------GW 215
+ G + G N + A + A +VI S G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 216 DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA 275
P N Y S + L + +A + M +R+ P + + A ++ VK+ + A
Sbjct: 292 RP-NVITYSSLISCLCN-YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 276 EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMF 335
E ++ M+ R ++ P Y+S++ + H+ L+ A+ M + M+ + FP+ +TYN +
Sbjct: 350 EKLYDEMIKR--SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 336 RFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
K +++ + +F EM + V + I + RD A V+K
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 29/308 (9%)
Query: 36 LEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA-GHRLLHDHTP-------YSWNLVVD 87
+E+ G+R +V+ S + S + RW+ RLL D ++N ++D
Sbjct: 286 MENKGVR------PNVITYS-SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 88 VL---GKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYR 144
GK + + ++D M KR + T++S+ + +A FE+M +
Sbjct: 339 AFVKEGKLVEAEKLYD---EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 145 CVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAK 203
C +VV NTL++ C + E + +++ ++ + + TY L+ G+ + + A+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 204 ETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAAL 263
F +MV G P N Y++ L L K + +A+ F+ ++ + P + Y +
Sbjct: 456 MVFKQMV-SDGVHP-NIMTYNTLLDGLCKNGK-LEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTT-LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR 322
E K V E W++ ++P +YN+M++ + E A + M
Sbjct: 513 EGMCKAGKV---EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Query: 323 GAFPDSLT 330
G PDS T
Sbjct: 570 GPLPDSGT 577
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 19/270 (7%)
Query: 95 FDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM-ENYRCVRDVVALN 153
FD++ ++ + +I +F VF +Y A LP A+ F M + +RC R V + N
Sbjct: 93 FDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFN 152
Query: 154 TLMSAVCSGG---KTLEAYDYL--QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
++++ + + G + LE YDY+ ++ I P+G ++ ++++ + A E F
Sbjct: 153 SVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRG 212
Query: 209 MVIESGWDPTNEPAYDSFL-CTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALE 264
M P + D + CTL+ G + I EAV D M+ C P Y ++
Sbjct: 213 M-------PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 265 QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
K D+ + M + P YN+++ L+ A +++ MV
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCV--PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 325 FPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
P+ +TY + L+K R+ DA R+ S M
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 110/280 (39%), Gaps = 6/280 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
S+NLV+ L K D + M +R L T+ ++ +A+ + M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNA 199
++ C V N L+ +C G + ++ K P+ TY L+ G +G
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
A MV S P N+ Y + + L+K +AV+ SM +R + Y
Sbjct: 309 DKAVSLLERMV-SSKCIP-NDVTYGTLINGLVKQRRAT-DAVRLLSSMEERGYHLNQHIY 365
Query: 260 KAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDM 319
+ K+ A W M + +P +Y+ ++ A+++++ M
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGC--KPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNEC 359
+ G P++ TY+ + + K +A +V+ EM K C
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 133/331 (40%), Gaps = 46/331 (13%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
+P +N+++D L K + +++M + + + T+ ++ G A+S
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 138 EVMENYRCVRDVVALNTLM-------------------------------SAVCSG---- 162
E M + +C+ + V TL+ S + SG
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 163 GKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEP 221
GK EA + + +K +P+ Y++L++G REG AKE M I SG P N
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGCLP-NAY 433
Query: 222 AYDSFLCTLIKGPDGI-REAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWE 280
Y S + K G+ EAV+ + M C Y ++ V+ A W
Sbjct: 434 TYSSLMKGFFK--TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 281 VMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR---GAFPDSLTYNLMFRF 337
ML ++P T Y+S++ ++ A K+ +M+ + + PD +TYN++
Sbjct: 492 KML--TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 338 LIKGRKLRDASRVFSEMVKNECVPDQPNCDA 368
L + + A + + M+ C PD C+
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 5/254 (1%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++SM +R ++ ++ + G +A+S + M C ++V + L+ +C
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 162 GGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
GK EA + L + P+ TY+ LM+G+ + G A + + EM + N+
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM--DKTGCSRNK 467
Query: 221 PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFW 279
Y S L + G ++EA+ + M P Y + ++ + A + +
Sbjct: 468 FCY-SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
E++ + QP YN +L D+ A +++ M+ RG PD +T N L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 340 KGRKLRDASRVFSE 353
+ D R F E
Sbjct: 587 EKSNSCDKGRSFLE 600
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 57/394 (14%)
Query: 18 QTLFEIISTTPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDH 77
L E P ++E AL+++GI + V + P F+WA +
Sbjct: 74 SNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTL 133
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKR---PGLISLATFASVFGSYVAAGLPGDAI 134
+P ++ VV+ L K F+ W + + L+S TF + Y AG+ AI
Sbjct: 134 SPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAI 193
Query: 135 STFEVMENYRCV----RDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR----PDGDTY 186
FE +Y V ++ L L+ A+C G EA YL+ + + P +
Sbjct: 194 RAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIF 253
Query: 187 AILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG------------- 233
IL+ GW R A++ + EM + +P ++ TLI+G
Sbjct: 254 NILLNGWFRSRKLKQAEKLWEEMKAMNV-----KPTVVTY-GTLIEGYCRMRRVQIAMEV 307
Query: 234 -------------------PDGIREAVKFFDS--MRDR----RCYPGLRFYKAALEQCVK 268
DG+ EA + ++ M +R P + Y + ++ K
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
D+ A ++M+ R + PTT+ YN + HN E + ++ G PD
Sbjct: 368 AGDLPGASKILKMMMTRG--VDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
LTY+L+ + L + KL A +V EM PD
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 150/371 (40%), Gaps = 44/371 (11%)
Query: 33 EKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKN 92
++ALE S ++ T V +VL+ + + ++FF W G R + H ++N+ + V G
Sbjct: 632 QEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCG 691
Query: 93 LLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMEN---------Y 143
F M M ++ LI+ T+A + Y GL AI TF+ M++ +
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTF 751
Query: 144 RCVRDVVA----------------------------LNTLMSAVCSGGKTLEAYDYLQDV 175
+C+ V+ + + +C G T +A L +
Sbjct: 752 KCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL 811
Query: 176 KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV-IESGWDPTNEPAYDSFLCTLIKGP 234
K P Y+I + R G +E +E+ E ++ Y S + L++
Sbjct: 812 GKIGFPVTVAYSIYIRALCRIGK---LEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Query: 235 DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTS 294
D +++A+ +SM++ PG+ Y + + K+ + + M G + +P+
Sbjct: 869 D-LQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGE--SCEPSVV 925
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
Y +M+ Y +E A +M RG PD TY+ L + K DA ++ SEM
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Query: 355 VKNECVPDQPN 365
+ P N
Sbjct: 986 LDKGIAPSTIN 996
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 158/359 (44%), Gaps = 9/359 (2%)
Query: 30 VAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVL 89
V++E LE R VE+VLK + +P A++FF W + H +N ++ +
Sbjct: 140 VSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIA 199
Query: 90 GKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDV 149
G+ D + + ++ M K + T+ + Y A G + FE M D
Sbjct: 200 GEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDA 259
Query: 150 VALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
A N ++ ++C G+ A ++ ++ ++K I TY +L++ + V ++ A+
Sbjct: 260 TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAK-SEKVDVVQSIAD 318
Query: 209 MVIESGWDPTNEPAYDSFLCTL-IKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV 267
++ + + A+ L + + G I+EA++ ++++ ++++ ++
Sbjct: 319 DMVRI-CEISEHDAFGYLLKSFCVSGK--IKEALELIRELKNKEMCLDAKYFEILVKGLC 375
Query: 268 KDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPD 327
+ + + A ++M RK +++Y +++ Y ND+ A + + + G P
Sbjct: 376 RANRMVDALEIVDIMKRRKL---DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPR 432
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVW 386
TY + + L K ++ +F+EM++N PD A + +L A KV+
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 15/261 (5%)
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ D + M +P LI+L T + G DA+ + M + V +++
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVN---GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 158 AVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWD 216
+C G+T A + L+ ++ + I+ D Y+I+++G ++G+ A F EM I+ G+
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GF- 294
Query: 217 PTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVR 273
+ Y++ + C + DG K M R+ P + + ++ VK+ +R
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDG----AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 274 MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNL 333
A+ + M+ R + P T YNS++ + N LE A +M+D M+ +G PD +T+N+
Sbjct: 351 EADQLLKEMMQRG--IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 334 MFRFLIKGRKLRDASRVFSEM 354
+ K ++ D +F EM
Sbjct: 409 LINGYCKANRIDDGLELFREM 429
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ V++V+ K+ + + M +R + ++ + G +A + F M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E D++ NTL+ C+ G+ + L+D +K++I P+ T+++L++ + +EG
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
A + EM ++ G P N Y+S + K + + EA++ D M + C P + +
Sbjct: 350 READQLLKEM-MQRGIAP-NTITYNSLIDGFCK-ENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 260 KAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
+ K + + E F E+ L + T YN+++ + LE A+K+ +
Sbjct: 407 NILINGYCKANRIDDGLELFREMSL---RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
MV R PD ++Y ++ L +L A +F ++ K++
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 137/340 (40%), Gaps = 47/340 (13%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+++++D L K+ D ++ N M + + T+ ++ G + AG D M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAV 200
+ +VV + L+ + GK EA L+++ ++ I P+ TY L++G+ +E N +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE-NRL 384
Query: 201 GAKETFAEMVIESGWDP----------------------------------TNEPAYDSF 226
+++I G DP N Y+
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN-- 442
Query: 227 LCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVM 282
TL++G + A K F M RR P + YK L+ + ++ A E F ++
Sbjct: 443 --TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI- 499
Query: 283 LGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGR 342
K+ ++ +Y ++ + ++ A + + +G D+ YN+M L +
Sbjct: 500 --EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 343 KLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMA 382
L A +F +M + PD+ + IR +L + DA A
Sbjct: 558 SLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 102/265 (38%), Gaps = 12/265 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N ++D K + ++ M + + TF + Y A D + F M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
+ + V NTL+ C GK A Q+ V + +RPD +Y IL++G G
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
A E F + IE + Y + + + +A F S+ + R Y
Sbjct: 490 EKALEIFGK--IEKSKMELDIGIYMIIIHGMCNASK-VDDAWDLFCSLPLKGVKLDARAY 546
Query: 260 KAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ---PTTSMYNSMLALYFYHNDLETARKMM 316
+ + + + A+ + RK T + P YN ++ + +D TA +++
Sbjct: 547 NIMISELCRKDSLSKADILF-----RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKG 341
++M G D T ++ L G
Sbjct: 602 EEMKSSGFPADVSTVKMVINMLSSG 626
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 6/216 (2%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+V NTL+SA S G EA++ + + K P TY ++ G + G AKE F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
AEM + SG P + Y S L K D + E K F MR R P L + + +
Sbjct: 329 AEM-LRSGLSP-DSTTYRSLLMEACKKGD-VVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
+ ++ A ++ + ++ L P +Y ++ Y + A + ++M+ +G
Sbjct: 386 TRSGNLDKALMYFNSV--KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
D +TYN + L K + L +A ++F+EM + PD
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 12/304 (3%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++N V++ L K+ ++ + M + T+ S+ + A GD + T +V
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL---MEACKKGDVVETEKV 362
Query: 140 MENYR---CVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWER 195
+ R V D+V +++MS G +A Y VK+ + PD Y IL++G+ R
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
+G A EM ++ G + Y++ L L K + EA K F+ M +R +P
Sbjct: 423 KGMISVAMNLRNEM-LQQGC-AMDVVTYNTILHGLCK-RKMLGEADKLFNEMTERALFPD 479
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
++ K +++ A ++ M ++ L T YN++L + D++TA+++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT--YNTLLDGFGKVGDIDTAKEI 537
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLD 375
DMV + P ++Y+++ L L +A RV+ EM+ P C++ I+ Y
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 376 NRDA 379
+ +A
Sbjct: 598 SGNA 601
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 12/287 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N ++ L K + N M +R T + + G +A+ F+ M
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
+ R DVV NTL+ G A + D V KEI P +Y+IL+ +G+
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLC-TLIKG---PDGIREAVKFFDSMRDRRCYPG 255
A + EM I PT +C ++IKG + F + M P
Sbjct: 567 AEAFRVWDEM-ISKNIKPT------VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
Y + V++ ++ A + M + L P YNS+L + N ++ A +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ M+ RG PD TY M + L +A R+ EM++ PD
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 8/286 (2%)
Query: 103 NSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSG 162
N M ++ + + T+ ++ + G+A F M D L L+ C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 163 GKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEP 221
G A + Q +K K IR D TY L++G+ + G+ AKE +A+MV + PT P
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL-PT--P 550
Query: 222 AYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEV 281
S L + + EA + +D M + P + + ++ + + E F E
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 282 MLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR--GAFPDSLTYNLMFRFLI 339
M+ P YN+++ + ++ A ++ M G PD TYN +
Sbjct: 611 MISEG--FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 340 KGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKV 385
+ ++++A V +M++ PD+ I ++ + A ++
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAK---RPGLISLATFASVFGSYVAAGLPGDAISTF 137
++ +VV+ L K D + M + PG++ T +Y DA++ F
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN---DALNLF 279
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWERE 196
M+N +VV N+L+ +C+ G+ +A L D ++++I P+ T++ L++ + +E
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKG---PDGIREAVKFFDSMRDRRC 252
G V A++ + EM I+ DP D F +LI G D + EA F+ M + C
Sbjct: 340 GKLVEAEKLYDEM-IKRSIDP------DIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 253 YPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLET 311
+P + Y ++ K V E F E+ + L T Y +++ +F + +
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREM---SQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 312 ARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
A+ + MV G PD +TY+++ L K+ A VF + +++ PD
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+V LN+L++ C G + +A + Q V+ +PD T+ L+ G R A A
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
MV++ G P + Y + L K D I A+ M + PG+ Y ++
Sbjct: 210 DRMVVK-GCQP-DLVTYGIVVNGLCKRGD-IDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
+V A + M + ++P YNS++ + A +++ DM+ R P
Sbjct: 267 CNYKNVNDALNLFTEMDNKG--IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ +T++ + +K KL +A +++ EM+K PD
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 12/276 (4%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
TF ++ +A++ + M C D+V +++ +C G A L+ +
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 176 KK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSF---LCTLI 231
++ +I P Y +++ N A F EM G P N Y+S LC
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD-NKGIRP-NVVTYNSLIRCLCNYG 305
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
+ D A + M +R+ P + + A ++ VK+ + AE ++ M+ R ++ P
Sbjct: 306 RWSD----ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--SIDP 359
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
Y+S++ + H+ L+ A+ M + M+ + FP+ +TYN + + K +++ + +F
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 352 SEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
EM + V + I + R+ A V+K
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 114 LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQ 173
L T+ V G A+S + ME + VV NT++ A+C+ +A +
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 174 DV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
++ K IRP+ TY L+ G A ++M IE +P N + + + +K
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINP-NVVTFSALIDAFVK 338
Query: 233 GPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQP 291
+ EA K +D M R P + Y + + C+ D + A+ +E+M+ + P
Sbjct: 339 -EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR-LDEAKHMFELMISKDCF--P 394
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
YN+++ + ++ ++ +M RG +++TY + + R+ +A VF
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 352 SEMVKNECVPD 362
+MV + +PD
Sbjct: 455 KQMVSDGVLPD 465
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 34/307 (11%)
Query: 67 RWA-GHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAI-------------NSMAKRPGLI 112
RW+ RLL D N V + F A+ DA + M KR
Sbjct: 306 RWSDASRLLSDMIERKINPNV------VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
+ T++S+ + +A FE+M + C +VV NTL+ C + E +
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 173 QDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+++ ++ + + TY L+ G+ + A+ F +MV G P + S L +
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV-SDGVLP--DIMTYSILLDGL 476
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTT-LQ 290
+ A+ F+ ++ + P + Y +E K V E W++ ++
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV---EDGWDLFCSLSLKGVK 533
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P Y +M++ + E A + +M G PDS TYN + R LRD +
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR-----AHLRDGDKA 588
Query: 351 FS-EMVK 356
S E+++
Sbjct: 589 ASAELIR 595
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 14/282 (4%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++ M +R ++ TF+++ ++V G +A ++ M D+ ++L++ C
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 162 GGKTLEAYDYLQ-DVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
+ EA + + K+ P+ TY L++G+ + E F EM + G N
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS-QRGL-VGNT 431
Query: 221 PAYDSFLCTLIKGPDGIRE---AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
Y TLI G RE A F M P + Y L+ + V A
Sbjct: 432 VTYT----TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 278 FWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR- 336
+E + +++ ++P YN M+ +E + + +G P+ +TY M
Sbjct: 488 VFEYL--QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 337 FLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRD 378
F KG K +A +F EM + +PD + IR +L + D
Sbjct: 546 FCRKGLK-EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 57/296 (19%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISL------------ATFASVFGSYVAAGL 129
W + DV N+L A+ A RP ++ L TF +V Y+ G
Sbjct: 183 WGIKPDVSTFNVLIKALCRA---HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 130 PGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE--IRPDGDTYA 187
A+ E M + C V++N ++ C G+ +A +++Q++ + PD T+
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 188 ILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSM 247
L+ G + G+ A E +++++ G+DP + Y+S + L K + ++EAV+ D M
Sbjct: 300 TLVNGLCKAGHVKHAIEIM-DVMLQEGYDP-DVYTYNSVISGLCKLGE-VKEAVEVLDQM 356
Query: 248 RDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHN 307
R C P T YN++++ N
Sbjct: 357 ITRDC-------------------------------------SPNTVTYNTLISTLCKEN 379
Query: 308 DLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+E A ++ + +G PD T+N + + L R R A +F EM C PD+
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 8/285 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++N +V+ L K + ++ M + + T+ SV G +A+ +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGN 198
M C + V NTL+S +C + EA + + + K I PD T+ L++G N
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI-KGPDGIREAVKFFDSMRDRRCYPGLR 257
A E F EM G +P +E Y+ + +L KG + EA+ M C +
Sbjct: 416 HRVAMELFEEMR-SKGCEP-DEFTYNMLIDSLCSKGK--LDEALNMLKQMELSGCARSVI 471
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y ++ K + R AE ++ M + T YN+++ +E A ++MD
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT--YNTLIDGLCKSRRVEDAAQLMD 529
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
M+ G PD TYN + +G ++ A+ + M N C PD
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 8/250 (3%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
T+ + S + G +A++ + ME C R V+ NTL+ C KT EA + ++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 176 KKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGP 234
+ + + TY L++G + A + +M++E G P ++ Y+S L +G
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKP-DKYTYNSLLTHFCRGG 554
Query: 235 DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTS 294
D I++A +M C P + Y + K V +A + + L P
Sbjct: 555 D-IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA- 612
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRG-AFPDSLTYNLMFRFLIK-GRKLRDASRVFS 352
YN ++ F A + +M+ + A PD+++Y ++FR L G +R+A
Sbjct: 613 -YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 353 EMVKNECVPD 362
E+++ VP+
Sbjct: 672 ELLEKGFVPE 681
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 19/291 (6%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLI-SLATFASVFGSYVAAGLPGDAISTFEV 139
S N++V K + + I M+ + G TF ++ AG AI +V
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGN 198
M DV N+++S +C G+ EA + L Q + ++ P+ TY L+ +E
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCT---LIKG---PDGIREAVKFFDSMRDRRC 252
A E A ++ G P +CT LI+G R A++ F+ MR + C
Sbjct: 381 VEEATE-LARVLTSKGILPD--------VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 253 YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
P Y ++ + A + M + + YN+++ + N A
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQM--ELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
++ D+M G +S+TYN + L K R++ DA+++ +M+ PD+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 23/325 (7%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETF 206
DV N L+ A+C + A L+D+ + PD T+ +M+G+ EG+ GA
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 207 AEMV-IESGWDPTNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCY-PGLRFYKAAL 263
+MV W + C +G + +A+ F M ++ + P + +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCK-----EGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
K V+ A +VML + P YNS+++ +++ A +++D M+ R
Sbjct: 303 NGLCKAGHVKHAIEIMDVML--QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAM 383
P+++TYN + L K ++ +A+ + + +PD ++ I+ R+ +AM
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 384 KVWK------CEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLS 437
++++ CE + + T N EA+ + M G + T +
Sbjct: 421 ELFEEMRSKGCEPDEF------TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 438 KLKHRLVKGRKEFLYEELLRKWKSH 462
L K K EE+ + + H
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVH 499
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 15/288 (5%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N ++ L K + + + + L + TF S+ A+ FE M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDG-----DTYAILMEGWER 195
+ C D N L+ ++CS GK EA + L K++ G TY L++G+ +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNML----KQMELSGCARSVITYNTLIDGFCK 482
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
A+E F EM E N Y++ + L K + +A + D M P
Sbjct: 483 ANKTREAEEIFDEM--EVHGVSRNSVTYNTLIDGLCKSRR-VEDAAQLMDQMIMEGQKPD 539
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
Y + L + D++ A + M +P Y ++++ +E A K+
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC--EPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV-KNECVPD 362
+ + +G YN + + L + RK +A +F EM+ +NE PD
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 8/292 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++NL++ L + DA + + M ++ + TF + Y AGL +
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
ME++ + + V NT++S+ C G+ ++ ++ +++E + PD T+ + +EG
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 199 AVGAKETFAEMVIES--GWDPTNEPAYDSFLCTLIKGPDGIREAVK-FFDSMRDRRCYPG 255
+ A F++M ++ G N Y+ L K G+ E K F+S+R+
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK--VGLLEDAKTLFESIRENDDLAS 325
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
L+ Y L+ V+ AE + M + + P+ YN ++ L A+ +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDK--GIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCD 367
+ M G PD++TY + K+ A + EM++N C+P+ C+
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 136/349 (38%), Gaps = 57/349 (16%)
Query: 80 YSWNLVVDVLGK-NLLFDAMWDAINSMAKRPGLISLA-TFASVFGSYVAAGLPGDAISTF 137
YS+N+++D L K +L DA I + KR G+ A T+ + Y + G A S
Sbjct: 362 YSYNILMDGLCKLGMLSDA--KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWERE 196
+ M C+ + N L+ ++ G+ EA + L+ + +K D T I+++G
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL--- 476
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
G+ E + I G A + + I D DS+ + C P L
Sbjct: 477 ---CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD---------DSLIENNCLPDL 524
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYF------------ 304
Y L K A+ + M+G K LQP + YN + +
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEK--LQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 305 -------YHNDLET----------------ARKMMDDMVYRGAFPDSLTYNLMFRFLIKG 341
H LET +MD+M +G P+ TYN ++L +G
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 342 RKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEV 390
K+ DA+ + EM++ P+ + I + D MA +V++ V
Sbjct: 643 EKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 151/360 (41%), Gaps = 63/360 (17%)
Query: 43 VTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAI 102
+++ V L+L +P+ ++FF W ++ H S+ L+++ LG+ + + +
Sbjct: 66 ISRTTVLQTLRL-IKVPADGLRFFDWVSNKGF-SHKEQSFFLMLEFLGRARNLNVARNFL 123
Query: 103 NSMAKRP-GLISLAT--FASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAV 159
S+ +R G + L F S+ SY AGL +++ F+ M+ V+ N+L+S +
Sbjct: 124 FSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 160 CSGGKTLEAYDYLQDVKKE--IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP 217
G+T A+D ++++ + PD T+ L+ G+ +
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS-------------------- 223
Query: 218 TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
+ EA + F M C P + Y ++ + V++A
Sbjct: 224 ------------------MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHN 265
Query: 278 FWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRF 337
ML + T + P Y +++ Y +++ A + DM+ RG P+++TYN + +
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 338 LIKGRK-------LRDASRVFSEMVKNECVPD---QPNCDAAIRIYLDNRDAFMAMKVWK 387
L + + L + F+ + C + + +CDA +LD AMKV++
Sbjct: 326 LSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG---HLD-----AAMKVFQ 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 36/271 (13%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
TF ++ + + +A F+ ME Y C DVV NT++ +C GK A++ L +
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 176 KK---EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
K ++ P+ +Y L+ G+ + A F +M + G P N Y+ TLIK
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM-LSRGLKP-NAVTYN----TLIK 324
Query: 233 GPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC-----VKDH------DVRMAEFFWEV 281
G+ EA + +D ++D F A + C +K H D M F +
Sbjct: 325 ---GLSEAHR-YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF--QE 378
Query: 282 MLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF-------PDSLTYNLM 334
ML K L P ++ Y+ ++ N+ + A + +++ + P + YN M
Sbjct: 379 MLNMK--LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPM 436
Query: 335 FRFLIKGRKLRDASRVFSEMVKNECVPDQPN 365
F +L K + A +VF +++K V D P+
Sbjct: 437 FEYLCANGKTKQAEKVFRQLMKRG-VQDPPS 466
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 123/259 (47%), Gaps = 7/259 (2%)
Query: 114 LATFASVFGSYVAAGLPGDAISTF-EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
+ F ++ +V G DA + +++ +Y V DV N+L+ G A + L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 173 QDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
D++ K +P+ +Y IL++G+ + G A EM + G P N ++ +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKP-NTVGFNCLISAFC 470
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
K I EAV+ F M + C P + + + + + +++ A + M+
Sbjct: 471 K-EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
T YN+++ + +++ ARK++++MV++G+ D +TYN + + L + ++ A +F
Sbjct: 530 VT--YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 352 SEMVKNECVPDQPNCDAAI 370
+M+++ P +C+ I
Sbjct: 588 EKMLRDGHAPSNISCNILI 606
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 6/285 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
YS+ ++VD K D ++ +N M+ + F + ++ +A+ F
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
M C DV N+L+S +C + A L+D+ E + + TY L+ + R G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
A++ EMV + P +E Y+S + L + + + +A F+ M P
Sbjct: 545 IKEARKLVNEMVFQG--SPLDEITYNSLIKGLCRAGE-VDKARSLFEKMLRDGHAPSNIS 601
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
+ + V A F + M+ R +T P +NS++ +E M
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGST--PDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+ G PD++T+N + +L KG + DA + E +++ VP+
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 149/367 (40%), Gaps = 39/367 (10%)
Query: 35 ALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLL 94
+L +S ++T + +L+L ++ S +++ F W G + + H+ + +++ LG N
Sbjct: 68 SLRNSFHKITPFQLYKLLELPLNV-STSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGE 126
Query: 95 FDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMEN-YRCVRDVVALN 153
F + + M + + F S+ Y AG PG M N Y C + N
Sbjct: 127 FKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYN 186
Query: 154 TLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
++ + SG A + D + ++I P T+ ++M+ + A +M +
Sbjct: 187 VVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT-K 245
Query: 213 SGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
G P N Y + + +L K + + EA++ + M L CV D
Sbjct: 246 HGCVP-NSVIYQTLIHSLSKC-NRVNEALQLLEEM--------------FLMGCVPD--- 286
Query: 273 RMAEFFWEVMLG--RKTTLQPTTSMYNSMLALYFYHNDLETARKM-----------MDDM 319
AE F +V+LG + + M N ML F +D+ M D+
Sbjct: 287 --AETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKN-ECVPDQPNCDAAIRIYLDNRD 378
YR P+ + +N + + +L DA V S+MV + VPD ++ I Y
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 379 AFMAMKV 385
+A++V
Sbjct: 405 VGLALEV 411
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 9/263 (3%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
++ D + + +P +++ + ++ S DA F+ +E +VV L+
Sbjct: 176 SLVDKMVEIGYKPDIVA---YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 157 SAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C+ + +A L D +KK+I P+ TY+ L++ + + G + AKE F EMV S
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-I 291
Query: 216 DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA 275
DP + Y S + L D I EA + FD M + C + Y + K V
Sbjct: 292 DP-DIVTYSSLINGLCL-HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 276 EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMF 335
+ M R L T YN+++ +F D++ A++ M + G PD TYN++
Sbjct: 350 MKLFREMSQR--GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 336 RFLIKGRKLRDASRVFSEMVKNE 358
L +L A +F +M K E
Sbjct: 408 GGLCDNGELEKALVIFEDMQKRE 430
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 121/301 (40%), Gaps = 41/301 (13%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++N+V++ + M K T S+ + DA+S +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGN 198
M D+VA N ++ ++C + +A+D+ +++ +K IRP+ TY L+ G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG------ 234
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
+ S W +A + M ++ P +
Sbjct: 235 ----------LCNSSRWS----------------------DAARLLSDMIKKKITPNVIT 262
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
Y A L+ VK+ V A+ +E M+ + ++ P Y+S++ H+ ++ A +M D
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMV--RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRD 378
MV +G D ++YN + K +++ D ++F EM + V + + I+ + D
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 379 A 379
Sbjct: 381 V 381
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 7/295 (2%)
Query: 94 LFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALN 153
L DA+ D + M K S+ F + + V IS + ME D+ N
Sbjct: 66 LNDAI-DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 154 TLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
+++ C + A L + +K PD T L+ G+ R N V + + ++E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR-NRVSDAVSLVDKMVE 183
Query: 213 SGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
G+ P + AY++ + +L K + +A FF + + P + Y A +
Sbjct: 184 IGYKP-DIVAYNAIIDSLCK-TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
A M+ +K T P Y+++L + + + A+++ ++MV PD +TY+
Sbjct: 242 SDAARLLSDMIKKKIT--PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ L ++ +A+++F MV C+ D + + I + + MK+++
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 10/309 (3%)
Query: 31 AVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
A++K+L GI ++ + V DVL V FF WA S+++++ LG
Sbjct: 103 AIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALG 162
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+ LF M D + M L S+V AI FE E++
Sbjct: 163 RRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE 222
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
+ N L+ +C A K I D +Y I++ GW + G ++ EMV
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 211 IESGWDPTNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
ESG+ P + +Y + L G G I ++V+ FD+++ + P Y A + +
Sbjct: 283 -ESGFGP-DCLSYSHLIEGL--GRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISA 338
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
D + ++ ML + +P Y+ +++ + A ++ ++M+ RG P
Sbjct: 339 RDFDESMRYYRRMLDEEC--EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP--- 393
Query: 330 TYNLMFRFL 338
T L+ FL
Sbjct: 394 TTGLVTSFL 402
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 135/281 (48%), Gaps = 12/281 (4%)
Query: 80 YSWN-LVVDVLGKNLLFDAM--WDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
+++N L+ +L + L DA+ + + S+ +P + F +G +G A+ T
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK---SGDSVSALET 455
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWER 195
FE M+ ++VA N + ++ G+ EA +K + PD TY ++M+ + +
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
G A + +EM +E+G +P + +S + TL K D + EA K F M++ + P
Sbjct: 516 VGEIDEAIKLLSEM-MENGCEP-DVIVVNSLINTLYKA-DRVDEAWKMFMRMKEMKLKPT 572
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+ Y L K+ ++ A +E M+ + P T +N++ ++++ A KM
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC--PPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
+ M+ G PD TYN + L+K ++++A F +M K
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 77 HTP--YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAI 134
H P ++ ++D N D++ + M K + + TF + + AG G+A
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 135 STFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGW 193
T +VM + + ++ NTL+ + + +A + +++ ++P TY + ++ +
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 194 EREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG-------------------P 234
+ G++V A ETF +M + G P N A ++ L +L K P
Sbjct: 444 GKSGDSVSALETFEKMKTK-GIAP-NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 235 DG---------------IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFW 279
D I EA+K M + C P + + + K R+ E +
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD--RVDEAWK 559
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
M ++ L+PT YN++LA + ++ A ++ + MV +G P+++T+N +F L
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 340 KGRKLRDASRVFSEMVKNECVPD 362
K ++ A ++ +M+ CVPD
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPD 642
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 108/283 (38%), Gaps = 4/283 (1%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
T ++N ++ LGKN + M ++ + TF ++F A+
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREG 197
M + CV DV NT++ + G+ EA + +KK + PD T L+ G +
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSM-RDRRCYPGL 256
A + + P N D L I GI AV F + + + C G
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWED--LIGSILAEAGIDNAVSFSERLVANGICRDGD 749
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
+ K ++V A +E + +QP YN ++ + +E A+ +
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFE-KFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNEC 359
+ G PD TYN + K K+ + ++ EM +EC
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 10/297 (3%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++NL++ L + + + D + + +AT+ + +Y +G + ++ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV--KKEIRPDGDTYAILMEGWEREGN 198
+ C + + N ++S + G +A D D+ ++ P TY L++G + G
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
AK+ F E +++ G P N Y+ + K + A F M P L+
Sbjct: 907 LYEAKQLF-EGMLDYGCRP-NCAIYNILINGFGKAGEA-DAACALFKRMVKEGVRPDLKT 963
Query: 259 YKAALE-QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y ++ C+ +F E+ +++ L P YN ++ + LE A + +
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKEL---KESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 318 DM-VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
+M RG PD TYN + L + +A ++++E+ + P+ +A IR Y
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 8/285 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF-EV 139
++N ++D GK+ D +++ M+ + T V V AG DA+ + ++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGN 198
M + L+ + G+ EA + + RP+ Y IL+ G+ + G
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
A A F MV E G P + C + G + E + +F +++ P +
Sbjct: 942 ADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGR--VDEGLHYFKELKESGLNPDVVC 998
Query: 259 YKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y + K H + A F E+ R T P YNS++ +E A K+ +
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGIT--PDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
++ G P+ T+N + R K A V+ MV P+
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 115/301 (38%), Gaps = 10/301 (3%)
Query: 65 FFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSY 124
+F+ L HT + N +++ L + + M + M KR T+ ++F S
Sbjct: 104 YFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSL 163
Query: 125 VAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDG 183
G A M + V + + N L+ + EA + Y + + + RP
Sbjct: 164 SVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSL 223
Query: 184 DTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG-IREAVK 242
TY+ LM G + + EM G P Y +C + G G I EA +
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEME-TLGLKPN---VYTFTICIRVLGRAGKINEAYE 279
Query: 243 FFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLA 301
M D C P + Y ++ + A E F ++ GR +P Y ++L
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH---KPDRVTYITLLD 336
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
+ + DL++ ++ +M G PD +T+ ++ L K +A M +P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 362 D 362
+
Sbjct: 397 N 397
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 173/421 (41%), Gaps = 30/421 (7%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDA-----INSMAKRPGLISLA- 115
+++FF WA R H+ + +V+ L KN F + +N P + A
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 116 ------------TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGG 163
F S+F ++ +A TF M++Y + V + N MS++ G
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 164 KTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPA 222
+ A + +++++ +I P+ T ++M G+ R G E +M G+ T + +
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME-RLGFRAT-DVS 275
Query: 223 YDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFW 279
Y+ TLI G + A+K + M P + + + + ++ A +
Sbjct: 276 YN----TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
M + + P T YN+++ Y D E A + +DMV G D LTYN + L
Sbjct: 332 GEM--KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 340 KGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLED 399
K K R A++ E+ K VP+ A I ++A +++K + E
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQ 449
Query: 400 TANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEFLYEELLRKW 459
T N A + +M+ R I L S T+ ++ + L K+ L ++LL++
Sbjct: 450 TFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Query: 460 K 460
+
Sbjct: 510 E 510
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 173/421 (41%), Gaps = 30/421 (7%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDA-----INSMAKRPGLISLA- 115
+++FF WA R H+ + +V+ L KN F + +N P + A
Sbjct: 98 SLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDAL 157
Query: 116 ------------TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGG 163
F S+F ++ +A TF M++Y + V + N MS++ G
Sbjct: 158 LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQG 217
Query: 164 KTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPA 222
+ A + +++++ +I P+ T ++M G+ R G E +M G+ T + +
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME-RLGFRAT-DVS 275
Query: 223 YDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFW 279
Y+ TLI G + A+K + M P + + + + ++ A +
Sbjct: 276 YN----TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
M + + P T YN+++ Y D E A + +DMV G D LTYN + L
Sbjct: 332 GEM--KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 340 KGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLED 399
K K R A++ E+ K VP+ A I ++A +++K + E
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQ 449
Query: 400 TANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEFLYEELLRKW 459
T N A + +M+ R I L S T+ ++ + L K+ L ++LL++
Sbjct: 450 TFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Query: 460 K 460
+
Sbjct: 510 E 510
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 128/339 (37%), Gaps = 46/339 (13%)
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNA 199
M N C D V+ T++S++C G E +++ + P Y L+ G +E +
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAERFEPVVSVYNALINGLCKEHDY 262
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
GA E EMV E G P N +Y + + L I A F M R C+P +
Sbjct: 263 KGAFELMREMV-EKGISP-NVISYSTLINVLCNSGQ-IELAFSFLTQMLKRGCHPNIYTL 319
Query: 260 KAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA------- 312
+ ++ C A W M+ R LQP YN+++ + H ++ A
Sbjct: 320 SSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 313 ---------------------RKMMDDMVY-------RGAFPDSLTYNLMFRFLIKGRKL 344
R +D VY G P+ + Y M L + K
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLED--TAN 402
++A + M K C P P +A I+ D A KV++ ++E R + T N
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR-QMEQQHRCPPNIVTYN 497
Query: 403 XXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLSKLKH 441
EA ++ RG++ +SST + L H
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 132/327 (40%), Gaps = 46/327 (14%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVF 121
A+ FF+ + L HTP ++ +++ L + D++ + M + S F SV
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 122 GSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IR 180
Y GL A+ F ++ + C V N ++ + + Y +D+K++
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 181 PDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREA 240
P+ TY +L++ + GAK+ EM +N+ PD +
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEM--------SNKGCC----------PDAVS-- 218
Query: 241 VKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSML 300
+ ++ C GL VK+ +AE F +P S+YN+++
Sbjct: 219 ---YTTVISSMCEVGL----------VKEGR-ELAERF-----------EPVVSVYNALI 253
Query: 301 ALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECV 360
+D + A ++M +MV +G P+ ++Y+ + L ++ A ++M+K C
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 361 PDQPNCDAAIRIYLDNRDAFMAMKVWK 387
P+ + ++ F A+ +W
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWN 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 146/364 (40%), Gaps = 10/364 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF-EV 139
S++ +++VL + + + + M KR ++ T +S+ G DA+ + ++
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGN 198
+ + +VVA NTL+ CS G ++A +++ P+ TY L+ G+ + G+
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
GA + +M + SG P N Y + + L + +EA + M C P +
Sbjct: 403 LDGAVYIWNKM-LTSGCCP-NVVVYTNMVEALCRHSK-FKEAESLIEIMSKENCAPSVPT 459
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
+ A ++ + AE + M ++ P YN +L N +E A + +
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQM-EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRD 378
+ RG S TYN + A ++ +M+ + PD+ + I Y
Sbjct: 519 IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGK 578
Query: 379 AFMAMKVW---KCEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSST 435
A A ++ C +R D+ N + V E MI GI + +T
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE-DGVILLERMISAGIVPSIAT 637
Query: 436 LSKL 439
S L
Sbjct: 638 WSVL 641
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 152/405 (37%), Gaps = 84/405 (20%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+++ L+ GI +T+ V +V+ + A + + +H + +N ++DVLGK
Sbjct: 96 IKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGK 155
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF-------------- 137
F+ + M+KR G ++ T+ + Y AA +A+ F
Sbjct: 156 MRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVA 215
Query: 138 --------------EVMENYRCVR------DVVALNTLMSAVCSGGKTLEAYDYLQD-VK 176
E E C R D+ A+N +++ C G EA + +D +
Sbjct: 216 FHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIA 275
Query: 177 KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG--- 233
+ RPD +Y ++ ++G A E + M WD P D +C +
Sbjct: 276 SKCRPDVVSYGTMINALTKKGKLGKAMELYRAM-----WDTRRNP--DVKICNNVIDALC 328
Query: 234 -PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWE------------ 280
I EA++ F + ++ P + Y + L+ K +R E WE
Sbjct: 329 FKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK---IRRTEKVWELVEEMELKGGSC 385
Query: 281 ---------------------VMLGR--KTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
++L R K + T+ +YN M LY + E R++
Sbjct: 386 SPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWS 445
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+M G PD TY + L K+ +A F EM+ VP+
Sbjct: 446 EMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 145/365 (39%), Gaps = 59/365 (16%)
Query: 73 LLHDHTPYS---WNLVVDVLGKNLLFDAMWDAINSMAK---RPGLISLATFASVFGSYVA 126
L+ + TP +N ++ LG+N+ M D + M + RP +++L +
Sbjct: 285 LMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL---INTLCK 341
Query: 127 AGLPGDAISTFEVMENYRC------VRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR 180
+ +A+ FE M R D + NTL+ +C G+ EA + L +K E R
Sbjct: 342 SRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 181 --PDGDTYAILMEGWEREGNAVGAKETFAEM-------------VIESGW---------- 215
P+ TY L++G+ R G AKE + M I G
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 216 ----DPTNEPAYDSFLC--TLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKA---AL 263
D E + + TLI + +A+ +++ M + C P + Y A L
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 264 EQCVKDHD-VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR 322
Q +DHD +R+ E E YN ++ L+ N+ E +M+ DM
Sbjct: 522 CQVRRDHDAIRVVEKLKE------GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 323 GAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMA 382
G PDS+TYN + F K + R+ +M ++ P A I Y + A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 383 MKVWK 387
+K++K
Sbjct: 636 LKLFK 640
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 17/214 (7%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILM 190
DAI E ++ D++A N L+ C + Y+ L D++KE +PD TY L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 191 E--GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFD 245
G ++ +V E E + E G DPT Y + + C++ + EA+K F
Sbjct: 589 SFFGKHKDFESV---ERMMEQMREDGLDPT-VTTYGAVIDAYCSV----GELDEALKLFK 640
Query: 246 SM-RDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYF 304
M + P Y + K + A E M + ++P YN++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM--KMKMVRPNVETYNALFKCLN 698
Query: 305 YHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFL 338
ET K+MD+MV + P+ +T ++ L
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 157/381 (41%), Gaps = 30/381 (7%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHT-PYSWNLVVDVLG 90
V+ L S I TQ E L Y PS + FF W H+ SW +++ +L
Sbjct: 34 VDSGLLKSAI-TTQVISELSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMIL-ILT 91
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGS------------------YVAAGLPGD 132
K+ F ++ +A+R L S S+ G Y AG+ D
Sbjct: 92 KHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIND 151
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILME 191
+I FE + + + A L++++ T + + VK + + Y +L+
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRR 251
+ G+ A++ +EM E G P + Y++ + K EA+ D M
Sbjct: 212 ACSKSGDPEKAEKLLSEME-EKGVFP-DIFTYNTLISVYCKKSMHF-EALSVQDRMERSG 268
Query: 252 CYPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLE 310
P + Y + + ++ +R A F E+ K + Y +++ Y ND++
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREI----KDDVTANHVTYTTLIDGYCRMNDID 324
Query: 311 TARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAI 370
A ++ + M RG P +TYN + R L + ++R+A+R+ +EM + PD C+ I
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 371 RIYLDNRDAFMAMKVWKCEVE 391
Y D A+KV K +E
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIE 405
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 145/365 (39%), Gaps = 59/365 (16%)
Query: 73 LLHDHTPYS---WNLVVDVLGKNLLFDAMWDAINSMAK---RPGLISLATFASVFGSYVA 126
L+ + TP +N ++ LG+N+ M D + M + RP +++L +
Sbjct: 285 LMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL---INTLCK 341
Query: 127 AGLPGDAISTFEVMENYRC------VRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR 180
+ +A+ FE M R D + NTL+ +C G+ EA + L +K E R
Sbjct: 342 SRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 181 --PDGDTYAILMEGWEREGNAVGAKETFAEM-------------VIESGW---------- 215
P+ TY L++G+ R G AKE + M I G
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 216 ----DPTNEPAYDSFLC--TLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKA---AL 263
D E + + TLI + +A+ +++ M + C P + Y A L
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 264 EQCVKDHD-VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR 322
Q +DHD +R+ E E YN ++ L+ N+ E +M+ DM
Sbjct: 522 CQVRRDHDAIRVVEKLKE------GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 323 GAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMA 382
G PDS+TYN + F K + R+ +M ++ P A I Y + A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 383 MKVWK 387
+K++K
Sbjct: 636 LKLFK 640
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 145/365 (39%), Gaps = 59/365 (16%)
Query: 73 LLHDHTPYS---WNLVVDVLGKNLLFDAMWDAINSMAK---RPGLISLATFASVFGSYVA 126
L+ + TP +N ++ LG+N+ M D + M + RP +++L +
Sbjct: 285 LMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGIL---INTLCK 341
Query: 127 AGLPGDAISTFEVMENYRC------VRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR 180
+ +A+ FE M R D + NTL+ +C G+ EA + L +K E R
Sbjct: 342 SRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 181 --PDGDTYAILMEGWEREGNAVGAKETFAEM-------------VIESGW---------- 215
P+ TY L++G+ R G AKE + M I G
Sbjct: 402 CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 216 ----DPTNEPAYDSFLC--TLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKA---AL 263
D E + + TLI + +A+ +++ M + C P + Y A L
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 264 EQCVKDHD-VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR 322
Q +DHD +R+ E E YN ++ L+ N+ E +M+ DM
Sbjct: 522 CQVRRDHDAIRVVEKLKE------GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKE 575
Query: 323 GAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMA 382
G PDS+TYN + F K + R+ +M ++ P A I Y + A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 383 MKVWK 387
+K++K
Sbjct: 636 LKLFK 640
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILM 190
DAI E ++ D++A N L+ C T + Y+ L D++KE +PD TY L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 191 E--GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFD 245
G ++ +V E E + E G DPT Y + + C++ + EA+K F
Sbjct: 589 SFFGKHKDFESV---ERMMEQMREDGLDPT-VTTYGAVIDAYCSV----GELDEALKLFK 640
Query: 246 SM-RDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYF 304
M + P Y + K + A E M + ++P YN++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM--KMKMVRPNVETYNALFKCLN 698
Query: 305 YHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFL 338
ET K+MD+MV + P+ +T ++ L
Sbjct: 699 EKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 12/231 (5%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETF 206
DVV +++L++ C G + +A D + +++ RPD Y +++G + G A E F
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 207 AEMVIESGWDPTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAAL 263
M E + Y+S LC + D A + M R P + + A +
Sbjct: 198 DRM--ERDGVRADAVTYNSLVAGLCCSGRWSD----AARLMRDMVMRDIVPNVITFTAVI 251
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
+ VK+ A +E M R + P YNS++ H ++ A++M+D MV +G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRR--CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
PD +TYN + K +++ + +++F EM + V D + I+ Y
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 23/265 (8%)
Query: 105 MAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVR-DVVALNTLMSAVCSGG 163
M R + ++ TF +V +V G +A+ +E M RCV DV N+L++ +C G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR-RCVDPDVFTYNSLINGLCMHG 293
Query: 164 KTLEAYDYLQ-DVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPA 222
+ EA L V K PD TY L+ G+ + + F EM T
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT--IT 351
Query: 223 YDSFLCTLIKG------PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAE 276
Y+ T+I+G PD +E DS P +R Y L + V A
Sbjct: 352 YN----TIIQGYFQAGRPDAAQEIFSRMDS------RPNIRTYSILLYGLCMNWRVEKAL 401
Query: 277 FFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR 336
+E M +K+ ++ + YN ++ ++E A + + +G PD ++Y M
Sbjct: 402 VLFENM--QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 337 FLIKGRKLRDASRVFSEMVKNECVP 361
+ R+ + ++ +M ++ +P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 134/316 (42%), Gaps = 17/316 (5%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N+++ G+ FD +D + M + ++ ++ ++ +A M
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E+ V N L+ CS GK +A+ + ++ +KK I + TY L++G G
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
A++ E + G P + Y+S LI G ++ + ++ M+ P L
Sbjct: 581 SEAEDLLLE-ISRKGLKP-DVFTYNS----LISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
+ Y + C K+ F E+ +L+P +YN +L Y H D+E A +
Sbjct: 635 KTYHLLISLCTKEGIELTERLFGEM------SLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDN 376
M+ + D TYN + +K KL + + EM E P+ + ++ + +
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 377 RDAFMAMKVWKCEVEH 392
+D +M+ VW E++
Sbjct: 749 KD-YMSAYVWYREMQE 763
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 150/382 (39%), Gaps = 27/382 (7%)
Query: 71 HRLLHDH---TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAA 127
+R+ HD + + +N+++D L K + + M R L SL T+ ++ Y A
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 128 GLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTY 186
G P + E M+ ++ NTL+ + G +A + L+++K PD T+
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 187 AILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYD-SFLCTLIKGPDGIREAVKFFD 245
+IL +G+ A A + E ++SG AY S L + I +A +
Sbjct: 323 SILFDGYSSNEKAEAALGVY-ETAVDSGVKMN---AYTCSILLNALCKEGKIEKAEEILG 378
Query: 246 SMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFY 305
+ P Y ++ + D+ A E M K ++P YN ++ +
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM--EKQGMKPDHLAYNCLIRRFCE 436
Query: 306 HNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPN 365
++E A K ++ M +G P TYN++ + + + EM N +P+ +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 366 CDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTA--------NXXXXXXXXXXXXPEA 417
I E + +RD+ED N +A
Sbjct: 497 YGTLINCLCKGSKLL--------EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 418 VKYAEDMIGRGIKLTSSTLSKL 439
+++++M+ +GI+L T + L
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTL 570
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 20/251 (7%)
Query: 155 LMSAVCSGGKTL-EAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
L+S + + K + EA D ++ E I P D+ +L++ + F ++E
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN-ILE 172
Query: 213 SGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
S + P+ + Y + +K D + + ++ F+ M+ R YP + Y ++ K +
Sbjct: 173 SDFRPS-KFMYGKAIQAAVKLSD-VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
AE ++ ML R+ L P+ YN+++ Y + E + K+ + M P +T+N
Sbjct: 231 NDAEQLFDEMLARR--LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPD-------------QPNCDAAIRIYLDNRDA 379
+ + L K + DA V EM VPD +AA+ +Y D+
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 380 FMAMKVWKCEV 390
+ M + C +
Sbjct: 349 GVKMNAYTCSI 359
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 8/278 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++N V++ L K+ + + M +R ++ T+ ++ G +A +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGN 198
M++ +++ NTL+ C GK +A +D+K + + P TY IL+ G+ R+G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
GA + EM E G P+ + Y + T + D + +A++ SM + P +
Sbjct: 389 TSGAAKMVKEME-ERGIKPS-KVTYTILIDTFAR-SDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 259 YKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y + C+K + F ++ + +P +YN+M+ Y A K++
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMV---EKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV 355
+M + P+ +Y M L K RK ++A R+ +M+
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 138/335 (41%), Gaps = 30/335 (8%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
T+ + G+ +E M+ ++ N +M+ +C G+T +A+ ++
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 176 KKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGP 234
++ + + TY L+ G RE A + +M G +P N Y+ TLI G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK-SDGINP-NLITYN----TLIDGF 348
Query: 235 DGIREAVKFFDSMRD---RRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
G+ + K RD R P L Y + + D A + M R ++P
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER--GIKP 406
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR-FLIKGRKLRDASRV 350
+ Y ++ + +++E A ++ M G PD TY+++ F IKG+ + +ASR+
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ-MNEASRL 465
Query: 351 FSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK--------CEVEHYRRDLEDTAN 402
F MV+ C P++ + I Y ++ A+K+ K V YR +E
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE---- 521
Query: 403 XXXXXXXXXXXXPEAVKYAEDMIGRGIKLTSSTLS 437
EA + E MI GI ++S LS
Sbjct: 522 ----VLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 123/290 (42%), Gaps = 12/290 (4%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H Y+ N++++ + + + + K TF ++ G +A+
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWER 195
+ M C DVV N++++ +C G T A D L+ ++ + ++ D TY+ +++ R
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRC 252
+G A F EM E+ ++ Y+S LC K DG M R
Sbjct: 241 DGCIDAAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDG----ALLLKDMVSREI 294
Query: 253 YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
P + + L+ VK+ ++ A ++ M+ R + P YN+++ Y N L A
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNRLSEA 352
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
M+D MV PD +T+ + + +++ D +VF + K V +
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN 402
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 130/284 (45%), Gaps = 16/284 (5%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N +V+ + ++ D + M +R + T++++ S G AIS F+ M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E VV N+L+ +C GK + L+D V +EI P+ T+ +L++ + +EG
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
A E + EM I G P N Y+ TL+ G + + EA D M +C P +
Sbjct: 315 QEANELYKEM-ITRGISP-NIITYN----TLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 257 RFYKAALEQ-C-VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ + ++ C VK D M + F + K L Y+ ++ + ++ A +
Sbjct: 369 VTFTSLIKGYCMVKRVDDGM-KVFRNI---SKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
+ +MV G PD +TY ++ L KL A +F ++ K++
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 126/329 (38%), Gaps = 52/329 (15%)
Query: 70 GHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDA---------INSMAKRPGLISLATFASV 120
GH++ D + N D+ N D M+ A + R + +++ +
Sbjct: 501 GHKIYKDMI--NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSIL 558
Query: 121 FGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK---- 176
+ AG + F M+ CV D A N ++ C GK +AY L+++K
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 177 --------------------------------KEIRPDGDTYAILMEGWEREGNAVGAKE 204
K I + Y+ L++G+ + G +
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR-IDEAY 677
Query: 205 TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALE 264
E +++ G P N ++S L L+K + I EA+ F SM++ +C P Y +
Sbjct: 678 LILEELMQKGLTP-NLYTWNSLLDALVKAEE-INEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 265 QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
K A FW+ M +K ++P+T Y +M++ ++ A + D G
Sbjct: 736 GLCKVRKFNKAFVFWQEM--QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 325 FPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
PDS YN M L G + DA +F E
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 153/410 (37%), Gaps = 73/410 (17%)
Query: 23 IISTTP-SVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYS 81
++ T P + E L + V VL+ D+ + A+++FRW R H P S
Sbjct: 42 VLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDV-NRAIEYFRWYERRTELPHCPES 100
Query: 82 WNLVVDVLGKNLLFDAM-----------------------------------WDAINSMA 106
+N ++ V+ + FDA+ +D + M
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 107 KRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTL 166
K + + + ++ G++ A ++ F+ M+ V TL+ G+
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 167 EAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS 225
A L ++K + D Y + ++ + + G A + F E IE+ +E Y S
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE--IEANGLKPDEVTYTS 278
Query: 226 FLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYK----------------AALEQ---- 265
+ L K + + EAV+ F+ + R P Y + LE+
Sbjct: 279 MIGVLCKA-NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 266 ----------CVKDHDVRMAEF--FWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETAR 313
C+ +M + +V K P S YN ++ + L+TA
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 314 KMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
++ D M G FP+ T N+M L K +KL +A +F EM C PD+
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDE 447
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 121/280 (43%), Gaps = 6/280 (2%)
Query: 85 VVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYR 144
++D LGK D + M + + S+ ++ G D ++ M N
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 145 CVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAK 203
C D+ LNT M + G+ + +++K + PD +Y+IL+ G + G A
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 204 ETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAAL 263
E F M E G + AY+ + K + +A + + M+ + P + Y + +
Sbjct: 573 ELFYSMK-EQGC-VLDTRAYNIVIDGFCKCGK-VNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
+ K + A +E ++ L +Y+S++ + ++ A ++++++ +G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELN--VVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
P+ T+N + L+K ++ +A F M + +C P+Q
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 5/282 (1%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ ++ VL K D + + K + + ++ Y +AG +A S E
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAV 200
+ V+A N +++ + GK EA +++KK+ P+ TY IL++ R G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 201 GAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYK 260
A E M ++G P N + + L K + EA F+ M + C P +
Sbjct: 395 TAFELRDSMQ-KAGLFP-NVRTVNIMVDRLCKSQK-LDEACAMFEEMDYKVCTPDEITFC 451
Query: 261 AALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMV 320
+ ++ K V A +E ML + + + +Y S++ +F H E K+ DM+
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKML--DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 321 YRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ PD N + K + +F E+ VPD
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 6/236 (2%)
Query: 127 AGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDT 185
AG P + FE ++ R V D + + L+ + G E Y+ +K++ D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 186 YAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFD 245
Y I+++G+ + G A + EM + G++PT Y S + L K D + EA F+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPT-VVTYGSVIDGLAK-IDRLDEAYMLFE 646
Query: 246 SMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFY 305
+ +R + Y + ++ K + A E ++ + L P +NS+L
Sbjct: 647 EAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM--QKGLTPNLYTWNSLLDALVK 704
Query: 306 HNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
++ A M P+ +TY ++ L K RK A + EM K P
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 143/338 (42%), Gaps = 19/338 (5%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYD--IPSHAVKFFRWAGHRL---LHDHTPYSWNLVV 86
+E+ L + + N V V++ + P ++FF W+ L LHD +N V+
Sbjct: 54 LEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDK---EFNYVL 110
Query: 87 DVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCV 146
VL + AM ++ + K + TF+ V + V G DAI F++++ + C
Sbjct: 111 RVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCP 170
Query: 147 RDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDG-DTYAILMEGWEREGNAVGAKET 205
+D + ++SA+CS G A + K I + Y L+ GW + N A+
Sbjct: 171 QDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRV 230
Query: 206 FAEMVIESGWDPTNEPAYDSFLCTLI-----KGPDG-IREAVKFFDSMRDRRCYPGLRFY 259
+M +G P + ++S L L + P G + EA+ MR + P Y
Sbjct: 231 IQDMK-SAGITP-DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSY 288
Query: 260 KAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDM 319
L + VR + E M +++ P T Y ++ + + +++D+M
Sbjct: 289 NILLSCLGRTRRVRESCQILEQM--KRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEM 346
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKN 357
+ RG P+ Y + L ++ A ++F +M ++
Sbjct: 347 IERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRS 384
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 11/253 (4%)
Query: 145 CVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKE 204
C DVV TLM+ +C G+ L+A L V + + Y ++ G + G+ A
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQA---LALVDRMVEEGHQPYGTIINGLCKMGDTESALN 62
Query: 205 TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALE 264
++M E + Y++ + L K I A F M D+ +P + Y ++
Sbjct: 63 LLSKM--EETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYSGMID 119
Query: 265 QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
+ AE M+ R+ + P +++++ + A ++ DM+ RG
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQ--INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 325 FPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMK 384
FP ++TYN M K +L DA R+ M C PD I Y + M+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 385 VWKCEVEHYRRDL 397
++ CE+ +RR +
Sbjct: 238 IF-CEM--HRRGI 247
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 127/284 (44%), Gaps = 10/284 (3%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H PY +++ L K ++ + ++ M + + + ++ G A +
Sbjct: 41 HQPYGT--IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWER 195
F M + DV+ + ++ + C G+ +A L+D ++++I PD T++ L+ +
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
EG A+E + +M + G PT Y+S + K D + +A + DSM + C P
Sbjct: 159 EGKVSEAEEIYGDM-LRRGIFPTT-ITYNSMIDGFCK-QDRLNDAKRMLDSMASKSCSPD 215
Query: 256 LRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ + + K V E F E+ + + T Y +++ + DL+ A+
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEM---HRRGIVANTVTYTTLIHGFCQVGDLDAAQD 272
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
+++ M+ G P+ +T+ M L ++LR A + ++ K+E
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 43/307 (14%)
Query: 89 LGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRD 148
LGK + + + P +I T+ + Y AG +A+S V++ D
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVI---TYNVMISGYCKAGEINNALS---VLDRMSVSPD 203
Query: 149 VVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFA 207
VV NT++ ++C GK +A + L + ++++ PD TY IL+E R+ A +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 208 EMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAAL---- 263
EM + G P + Y+ + + K + EA+KF + M C P + + L
Sbjct: 264 EMR-DRGCTP-DVVTYNVLVNGICK-EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 264 --------EQCVKD------------HDVRMAEFFWEVMLGRKTTL---------QPTTS 294
E+ + D ++ + + +LGR + QP +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
YN +L + ++ A + ++ MV RG +PD +TYN M L K K+ DA + +++
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 355 VKNECVP 361
C P
Sbjct: 441 SSKGCSP 447
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 102/235 (43%), Gaps = 10/235 (4%)
Query: 131 GDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAIL 189
G A+ + M + C DVV N L++ +C G+ EA +L D+ +P+ T+ I+
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 190 MEGWEREGNAVGAKETFAEMVIESGWDPT--NEPAYDSFLCTLIKGPDGIREAVKFFDSM 247
+ G + A++ A+M + G+ P+ +FLC KG G A+ + M
Sbjct: 316 LRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCR--KGLLG--RAIDILEKM 370
Query: 248 RDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHN 307
C P Y L K+ + A + E M+ R P YN+ML
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC--YPDIVTYNTMLTALCKDG 428
Query: 308 DLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+E A ++++ + +G P +TYN + L K K A ++ EM + PD
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 12/235 (5%)
Query: 131 GDAISTFEVMEN---YRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTY 186
G+ F+ +EN + V D++ TL+ C GKT +A L+ ++ PD TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 187 AILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDS 246
+++ G+ + G A M + + Y++ L +L +++A++ D
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSP-----DVVTYNTILRSLCDSGK-LKQAMEVLDR 229
Query: 247 MRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYH 306
M R CYP + Y +E +D V A + M R T P YN ++
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT--PDVVTYNVLVNGICKE 287
Query: 307 NDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
L+ A K ++DM G P+ +T+N++ R + + DA ++ ++M++ P
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 119/285 (41%), Gaps = 8/285 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N++V+ + K D +N M ++ T + S + G DA M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNA 199
VV N L++ +C G A D L+ + + +P+ +Y L+ G+ +E
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCYPGLRF 258
A E + E ++ G P + Y++ L L K DG + +AV+ + + + C P L
Sbjct: 396 DRAIE-YLERMVSRGCYP-DIVTYNTMLTALCK--DGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
Y ++ K A + M R L+P T Y+S++ ++ A K +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEM--RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE 509
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
G P+++T+N + L K R+ A M+ C P++
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
S+ TF + GL G AI E M + C + ++ N L+ C K A +YL
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 173 QD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+ V + PD TY ++ ++G A E ++ G P Y++ + L
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS-SKGCSPV-LITYNTVIDGLA 460
Query: 232 K-GPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTL 289
K G G +A+K D MR + P Y + + ++ V A +FF E + +
Sbjct: 461 KAGKTG--KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF---ERMGI 515
Query: 290 QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASR 349
+P +NS++ + A + M+ RG P+ +Y ++ L ++A
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALE 575
Query: 350 VFSEM 354
+ +E+
Sbjct: 576 LLNEL 580
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 135/327 (41%), Gaps = 44/327 (13%)
Query: 74 LHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDA 133
+HD + + + +V+ ++ N F A D I M ++S S+ Y P D+
Sbjct: 48 VHDQSSFGY-MVLRLVSANK-FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 134 ISTFEVMENYRC-----------------------------VRD------VVALNTLMSA 158
+ F M+++ C +R+ V +LN L+ A
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 159 VCSGGKTLEA--YDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWD 216
+C T++A +L+ K+ PD TY L+ G R G AK+ F EMV E
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV-EKDCA 224
Query: 217 PTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAE 276
PT Y S + L G + EA+++ + M+ + P + Y + ++ KD A
Sbjct: 225 PT-VVTYTSLINGLC-GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 277 FFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR 336
+E+M+ R +P Y +++ ++ A +++D M +G PD+ Y +
Sbjct: 283 ELFEMMMARGC--RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 337 FLIKGRKLRDASRVFSEMVKNECVPDQ 363
K R+A+ EM+ P++
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNR 367
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 145/336 (43%), Gaps = 12/336 (3%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAK-RPGLISLATFASV 120
A++FF+++ T S+ + +L + FD W + + K P L+S + + +
Sbjct: 86 ALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSIL 145
Query: 121 FGSYVAAGLPGDAISTFEVMEN--YRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE 178
G + + F ME +R V N L+ A C+ + EA + +
Sbjct: 146 LCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR 205
Query: 179 IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIR 238
PD T IL+ G++ G+ V A E F +++ G+ P N Y + K +
Sbjct: 206 FNPDVKTMNILLLGFKEAGD-VTATELFYHEMVKRGFKP-NSVTYGIRIDGFCKKRN-FG 262
Query: 239 EAVKFFDSMRDRRCYPGLRFYKAALE-QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYN 297
EA++ F+ M ++ + V + ++ + F E+ K L P YN
Sbjct: 263 EALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEI---SKRGLTPDCGAYN 319
Query: 298 SMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRK--LRDASRVFSEMV 355
++++ D+ A K+M +M +G PDS+T++ MF ++K ++ + +M
Sbjct: 320 ALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMK 379
Query: 356 KNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVE 391
+ VP P ++++ N + + + +WK +E
Sbjct: 380 ERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 8/286 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++N ++ + K + D ++ + ++ + + ++ + + + G +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGN 198
M + +C +VV + L++ +C GK EA + L+ +K K + PD +Y L+ + REG
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
A E F E +I G P + Y++ L TL K +A++ F + + C P
Sbjct: 384 LDVAIE-FLETMISDGCLP-DIVNYNTVLATLCKNGKA-DQALEIFGKLGEVGCSPNSSS 440
Query: 259 YKAALEQCVKDHD-VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y D +R E+M + P YNSM++ ++ A +++
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMM---SNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
DM P +TYN++ K ++ DA V MV N C P++
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 117/285 (41%), Gaps = 6/285 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++N +++ K D ++ M + T+ + GS + G A+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGN 198
+ + C V+ L+ A G EA + + + + ++PD TY ++ G +EG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
A E + ++ G +P + +Y+ L L+ E K M +C P +
Sbjct: 279 VDRAFEMVRNLELK-GCEP-DVISYNILLRALLN-QGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
Y + +D + A ++M ++ L P Y+ ++A + L+ A + ++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLM--KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
M+ G PD + YN + L K K A +F ++ + C P+
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 102/260 (39%), Gaps = 14/260 (5%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILM 190
DA + M + D V N ++ ++CS GK A L Q + +P TY IL+
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 191 EGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKG--PDG-IREAVKFFDS 246
E EG A + EM + G P D F T+I+G +G + A + +
Sbjct: 236 EATMLEGGVDEALKLMDEM-LSRGLKP------DMFTYNTIIRGMCKEGMVDRAFEMVRN 288
Query: 247 MRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYH 306
+ + C P + Y L + E M K P Y+ ++
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DPNVVTYSILITTLCRD 346
Query: 307 NDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNC 366
+E A ++ M +G PD+ +Y+ + + +L A M+ + C+PD N
Sbjct: 347 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 406
Query: 367 DAAIRIYLDNRDAFMAMKVW 386
+ + N A A++++
Sbjct: 407 NTVLATLCKNGKADQALEIF 426
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 139/351 (39%), Gaps = 40/351 (11%)
Query: 31 AVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
A E+AL++ G+R+ VLK D +A+ FF W + H +++ +V LG
Sbjct: 317 AAEEALQNLGLRIDAYQANQVLKQMNDY-GNALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+ F A+ ++ M + + T+ + SY A +A++ F M+ C D V
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
TL+ G A D Q ++ + PD TY++++ + G+ A + F EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 210 VIESGWDPTNEPAYDSFLCTLIKG-------------------PDGI------------- 237
V + G P N Y+ + K PD +
Sbjct: 496 V-DQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 238 --REAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
EA F M+ + P Y ++ K +V A +++ ML L+P
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HAGLRPNVPT 611
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRD 346
NS+L+ + N + A +++ +M+ G P TY L+ GR D
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 139/351 (39%), Gaps = 40/351 (11%)
Query: 31 AVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
A E+AL++ G+R+ VLK D +A+ FF W + H +++ +V LG
Sbjct: 317 AAEEALQNLGLRIDAYQANQVLKQMNDY-GNALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+ F A+ ++ M + + T+ + SY A +A++ F M+ C D V
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
TL+ G A D Q ++ + PD TY++++ + G+ A + F EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 210 VIESGWDPTNEPAYDSFLCTLIKG-------------------PDGI------------- 237
V + G P N Y+ + K PD +
Sbjct: 496 V-DQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 238 --REAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
EA F M+ + P Y ++ K +V A +++ ML L+P
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HAGLRPNVPT 611
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRD 346
NS+L+ + N + A +++ +M+ G P TY L+ GR D
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 139/351 (39%), Gaps = 40/351 (11%)
Query: 31 AVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
A E+AL++ G+R+ VLK D +A+ FF W + H +++ +V LG
Sbjct: 317 AAEEALQNLGLRIDAYQANQVLKQMNDY-GNALGFFYWLKRQPGFKHDGHTYTTMVGNLG 375
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+ F A+ ++ M + + T+ + SY A +A++ F M+ C D V
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
TL+ G A D Q ++ + PD TY++++ + G+ A + F EM
Sbjct: 436 TYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEM 495
Query: 210 VIESGWDPTNEPAYDSFLCTLIKG-------------------PDGI------------- 237
V + G P N Y+ + K PD +
Sbjct: 496 V-DQGCTP-NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCG 553
Query: 238 --REAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
EA F M+ + P Y ++ K +V A +++ ML L+P
Sbjct: 554 YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAML--HAGLRPNVPT 611
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRD 346
NS+L+ + N + A +++ +M+ G P TY L+ GR D
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 146/359 (40%), Gaps = 49/359 (13%)
Query: 43 VTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKN---------- 92
++ + V + L D P A+ F W + H+ YS+ ++ +L N
Sbjct: 88 ISPSHVSSLFSLDLD-PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR 146
Query: 93 LLF--------DAMW--DAINSMAKRPGL-----ISLATFASVFGSYVAAGLPGDAISTF 137
LL DA++ D M K + + + ++ S GL + +
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 138 -EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWER 195
E++E+ C ++ N +++ C G EA Y+ V+ + PD TY L+ G+ +
Sbjct: 207 MEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
+ A + F EM ++ NE AY + L I EA+ F M+D C+P
Sbjct: 266 RKDLDSAFKVFNEMPLKGCR--RNEVAYTHLIHGLCVARR-IDEAMDLFVKMKDDECFPT 322
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+R Y ++ R +E V +T ++P Y ++ E AR++
Sbjct: 323 VRTYTVLIKSLCGSE--RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 316 MDDMVYRGAFPDSLTYNLMFRF---------------LIKGRKLRDASRVFSEMVKNEC 359
+ M+ +G P+ +TYN + L++ RKL +R ++E++K C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 40/343 (11%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++ +++D L F+ + + M ++ + ++ T+ ++ Y G+ DA+ E+
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 140 MENYRCVRDVVALNTLMSAVCSGG--KTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREG 197
ME+ + + N L+ C K + + + +++++ PD TY L++G R G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM--LERKVLPDVVTYNSLIDGQCRSG 476
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
N A + M + G P ++ Y S + +L K + EA FDS+ + P +
Sbjct: 477 NFDSAYRLLSLMN-DRGLVP-DQWTYTSMIDSLCKSKR-VEEACDLFDSLEQKGVNPNVV 533
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGR-------------------------------- 285
Y A ++ K V A E ML +
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 286 -KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
K LQPT S ++ D + A M+ G PD+ TY + + +L
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
DA + ++M +N PD + I+ Y D A V K
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 128/319 (40%), Gaps = 66/319 (20%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++ ++D L K+ + D +S+ ++ ++ + ++ Y AG +A E
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEA------------------------------- 168
M + C+ + + N L+ +C+ GK EA
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 169 YD-----YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAY 223
+D + Q + +PD TY ++ + REG + A++ A+M E+G P
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR-ENGVSP------ 670
Query: 224 DSFL-CTLIKGPDGIREAVKFFD---SMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFW 279
D F +LIKG + + FD MRD C P + + + +
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF------------LSLIKHLL 718
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
E+ G++ +P ++M+ + +T ++++ MV P++ +Y + +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 340 KGRKLRDASRVFSEMVKNE 358
+ LR A +VF M +NE
Sbjct: 772 EVGNLRVAEKVFDHMQRNE 790
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKR---PGLISLATFASVFGSYVAAGLPGDAISTF 137
S+ V+ +L +L+FD+ + M R PG L T S + G A+ +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH---GKHSKALELW 493
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGD-----TYAILMEG 192
N V D N L+ +C GK EA+ ++KEI G +Y L+ G
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR----IQKEILGRGCVMDRVSYNTLISG 549
Query: 193 WEREGNAVGAKE-----TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSM 247
G K+ F + +++ G P N Y +C L + + EA++F+D
Sbjct: 550 ------CCGKKKLDEAFMFLDEMVKRGLKPDNY-TYSILICGLFN-MNKVEEAIQFWDDC 601
Query: 248 RDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHN 307
+ P + Y ++ C K + F++ M+ + +QP T +YN ++ Y
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSG 659
Query: 308 DLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
L A ++ +DM ++G P+S TY + + + ++ +A +F EM
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 10/286 (3%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N V+D LG +D + M +R +L T++ + A GDA + M
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 141 ENYRCVRDVVALNTLMSAVCSGG---KTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREG 197
+V+ N L+ + G K +E D + V K + TY L++G+ + G
Sbjct: 357 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM--VSKGLSLTSSTYNTLIKGYCKNG 414
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
A A+ EM + G++ N+ ++ S +C L+ A++F M R PG
Sbjct: 415 QADNAERLLKEM-LSIGFN-VNQGSFTSVIC-LLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
+ K A W L + + TS N++L L+ A ++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--NALLHGLCEAGKLDEAFRIQK 529
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+++ RG D ++YN + +KL +A EMVK PD
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 144/391 (36%), Gaps = 48/391 (12%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAV--KFFRWAGHRLLHDHTPYSWNL--VVDVL 89
K + G V Q V+ L + SH + R+ G LL + +P L ++ L
Sbjct: 424 KEMLSIGFNVNQGSFTSVICL---LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 90 GKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDV 149
K+ + + ++ T ++ AG +A + + CV D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 150 VALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
V+ NTL+S C K EA+ +L + VK+ ++PD TY+IL+ G N V F +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM-NKVEEAIQFWD 599
Query: 209 MVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
+G P + Y + K + E +FFD M + P Y + +
Sbjct: 600 DCKRNGMLP-DVYTYSVMIDGCCKA-ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG----- 323
+ MA E M + + P ++ Y S++ + +E A+ + ++M G
Sbjct: 658 SGRLSMALELREDM--KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 324 ------------------------------AFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
P+ +TY +M + + +ASR+ +E
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 354 MVKNECVPDQPNCDAAIRIYLDNRDAFMAMK 384
M + VPD I YL A K
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKR---PGLISLATFASVFGSYVAAGLPGDAISTF 137
S+ V+ +L +L+FD+ + M R PG L T S + G A+ +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH---GKHSKALELW 493
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGD-----TYAILMEG 192
N V D N L+ +C GK EA+ ++KEI G +Y L+ G
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR----IQKEILGRGCVMDRVSYNTLISG 549
Query: 193 WEREGNAVGAKE-----TFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSM 247
G K+ F + +++ G P N Y +C L + + EA++F+D
Sbjct: 550 ------CCGKKKLDEAFMFLDEMVKRGLKPDNY-TYSILICGLFN-MNKVEEAIQFWDDC 601
Query: 248 RDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHN 307
+ P + Y ++ C K + F++ M+ + +QP T +YN ++ Y
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSG 659
Query: 308 DLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
L A ++ +DM ++G P+S TY + + + ++ +A +F EM
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 10/286 (3%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N V+D LG +D + M +R +L T++ + A GDA + M
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM 356
Query: 141 ENYRCVRDVVALNTLMSAVCSGG---KTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREG 197
+V+ N L+ + G K +E D + V K + TY L++G+ + G
Sbjct: 357 TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM--VSKGLSLTSSTYNTLIKGYCKNG 414
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
A A+ EM + G++ N+ ++ S +C L+ A++F M R PG
Sbjct: 415 QADNAERLLKEM-LSIGFN-VNQGSFTSVIC-LLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
+ K A W L + + TS N++L L+ A ++
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--NALLHGLCEAGKLDEAFRIQK 529
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+++ RG D ++YN + +KL +A EMVK PD
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 144/391 (36%), Gaps = 48/391 (12%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAV--KFFRWAGHRLLHDHTPYSWNL--VVDVL 89
K + G V Q V+ L + SH + R+ G LL + +P L ++ L
Sbjct: 424 KEMLSIGFNVNQGSFTSVICL---LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 90 GKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDV 149
K+ + + ++ T ++ AG +A + + CV D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 150 VALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
V+ NTL+S C K EA+ +L + VK+ ++PD TY+IL+ G N V F +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM-NKVEEAIQFWD 599
Query: 209 MVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
+G P + Y + K + E +FFD M + P Y + +
Sbjct: 600 DCKRNGMLP-DVYTYSVMIDGCCKA-ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG----- 323
+ MA E M + + P ++ Y S++ + +E A+ + ++M G
Sbjct: 658 SGRLSMALELREDM--KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 324 ------------------------------AFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
P+ +TY +M + + +ASR+ +E
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 354 MVKNECVPDQPNCDAAIRIYLDNRDAFMAMK 384
M + VPD I YL A K
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 47/340 (13%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A++D + + P +I TF ++ G +A + M DVV T++
Sbjct: 212 ALFDQMVEIGLTPVVI---TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G T A + L +++ I+PD Y+ +++ ++G+ A+ F+EM +E G
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGI 327
Query: 216 DP---TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
P T D F C+ + D A + M +R P + + A + VK+ +
Sbjct: 328 APNVFTYNCMIDGF-CSFGRWSD----AQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDM------------- 319
AE + ML R + P T YNSM+ + HN + A+ M D M
Sbjct: 383 FEAEKLCDEMLHR--CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 320 VY------------------RGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
VY RG ++ TYN + + L A +F EM+ + P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 362 DQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTA 401
D C+ + + +N A+++++ ++ + DL+ A
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEV-IQMSKIDLDTVA 539
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 13/257 (5%)
Query: 119 SVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKK 177
++FG V G +A++ F+ M V+ NTL++ +C G+ LEA + V K
Sbjct: 197 ALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 178 EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI 237
+ D TY ++ G + G+ A ++M E+ P + Y + + L K DG
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ETHIKP-DVVIYSAIIDRLCK--DGH 311
Query: 238 REAVKF-FDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
++ F M ++ P + Y ++ A+ M+ R+ + P +
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE--INPDVLTF 369
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
N++++ L A K+ D+M++R FPD++TYN M K + DA +F M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 357 NECVPDQPNCDAAIRIY 373
PD + I +Y
Sbjct: 430 ----PDVVTFNTIIDVY 442
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 32/309 (10%)
Query: 65 FFRWA-GHRLLHDHTPYSWNLVVDVLGKNLLFDA------MWDA---INSMAKRPGLISL 114
F RW+ RLL D N DVL N L A +++A + M R
Sbjct: 344 FGRWSDAQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 115 ATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD 174
T+ S+ + DA F++M + DVV NT++ C + E L++
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 175 V-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCT-LIK 232
+ ++ + + TY L+ G+ N A++ F EM I G P D+ C L+
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-ISHGVCP------DTITCNILLY 510
Query: 233 G---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKT-T 288
G + + EA++ F+ ++ + Y + K V A W++
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA---WDLFCSLPIHG 567
Query: 289 LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDAS 348
++P YN M++ + + + A + M G PD+ TYN + R +K ++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 349 RVFSEMVKN 357
+ SEM N
Sbjct: 628 ELISEMRSN 636
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 127/327 (38%), Gaps = 28/327 (8%)
Query: 95 FDAMWDAIN---SMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
F ++ DAI+ M + + V G +V P AIS + ME R ++ +
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 152 LNTLMSAVCSGGK---TLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
N L+ C K +L + L K +PD T+ L+ G E A F
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKL--TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 209 MVIESGW-------DPTNE----PAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYP 254
MV E+G+ D E P +F TLI G + EA + M + +
Sbjct: 202 MV-ETGFLEAVALFDQMVEIGLTPVVITFN-TLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 255 GLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ Y + K D + A M +T ++P +Y++++ A+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
+ +M+ +G P+ TYN M + DA R+ +M++ E PD +A I +
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 375 DNRDAFMAMKVWKCEVEHYRRDLEDTA 401
F A K+ C+ +R DT
Sbjct: 378 KEGKLFEAEKL--CDEMLHRCIFPDTV 402
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 47/340 (13%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A++D + + P +I TF ++ G +A + M DVV T++
Sbjct: 212 ALFDQMVEIGLTPVVI---TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G T A + L +++ I+PD Y+ +++ ++G+ A+ F+EM +E G
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGI 327
Query: 216 DP---TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
P T D F C+ + D A + M +R P + + A + VK+ +
Sbjct: 328 APNVFTYNCMIDGF-CSFGRWSD----AQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDM------------- 319
AE + ML R + P T YNSM+ + HN + A+ M D M
Sbjct: 383 FEAEKLCDEMLHR--CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIID 440
Query: 320 VY------------------RGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
VY RG ++ TYN + + L A +F EM+ + P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 362 DQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTA 401
D C+ + + +N A+++++ ++ + DL+ A
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEV-IQMSKIDLDTVA 539
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 119 SVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKK 177
++FG V G +A++ F+ M V+ NTL++ +C G+ LEA + V K
Sbjct: 197 ALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 178 EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI 237
+ D TY ++ G + G+ A ++M E + Y + + L K DG
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCK--DGH 311
Query: 238 REAVKF-FDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
++ F M ++ P + Y ++ A+ M+ R+ + P +
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE--INPDVLTF 369
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
N++++ L A K+ D+M++R FPD++TYN M K + DA +F M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 357 NECVPDQPNCDAAIRIY 373
PD + I +Y
Sbjct: 430 ----PDVVTFNTIIDVY 442
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 32/309 (10%)
Query: 65 FFRWA-GHRLLHDHTPYSWNLVVDVLGKNLLFDA------MWDA---INSMAKRPGLISL 114
F RW+ RLL D N DVL N L A +++A + M R
Sbjct: 344 FGRWSDAQRLLRDMIEREIN--PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 115 ATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD 174
T+ S+ + DA F++M + DVV NT++ C + E L++
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 175 V-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCT-LIK 232
+ ++ + + TY L+ G+ N A++ F EM I G P D+ C L+
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM-ISHGVCP------DTITCNILLY 510
Query: 233 G---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKT-T 288
G + + EA++ F+ ++ + Y + K V A W++
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA---WDLFCSLPIHG 567
Query: 289 LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDAS 348
++P YN M++ + + + A + M G PD+ TYN + R +K ++ +
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 349 RVFSEMVKN 357
+ SEM N
Sbjct: 628 ELISEMRSN 636
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 127/327 (38%), Gaps = 28/327 (8%)
Query: 95 FDAMWDAIN---SMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
F ++ DAI+ M + + V G +V P AIS + ME R ++ +
Sbjct: 84 FKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 152 LNTLMSAVCSGGK---TLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
N L+ C K +L + L K +PD T+ L+ G E A F
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKL--TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 209 MVIESGW-------DPTNE----PAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYP 254
MV E+G+ D E P +F TLI G + EA + M + +
Sbjct: 202 MV-ETGFLEAVALFDQMVEIGLTPVVITFN-TLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 255 GLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ Y + K D + A M +T ++P +Y++++ A+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKM--EETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
+ +M+ +G P+ TYN M + DA R+ +M++ E PD +A I +
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 375 DNRDAFMAMKVWKCEVEHYRRDLEDTA 401
F A K+ C+ +R DT
Sbjct: 378 KEGKLFEAEKL--CDEMLHRCIFPDTV 402
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 13/292 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
S+ ++ K+ +D + MA+R + T+ + V +G DA++ +
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
+ D N LMS +C G+ L A + + + I PD YA L++G+ R G+
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 200 VGAKETFAEMVIESGW--DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
A++ F+ + +E G D + A C + EA+ + M + P
Sbjct: 502 DEARKVFS-LSVEKGVKVDVVHHNAMIKGFCR----SGMLDEALACMNRMNEEHLVPDKF 556
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y ++ VK D+ A + M K +P Y S++ + D + A +
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYM--EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 318 DMVYRGAFPDSLTYNLMFRFLIK-GRKLRDASRVFSEMVKNECVPDQP--NC 366
+M R P+ +TY + R L K L A + M+ N+CVP++ NC
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 134/343 (39%), Gaps = 50/343 (14%)
Query: 62 AVKFFRWAGHRLLHD--HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFAS 119
VK F W + ++ + + +L + +F+ + D + ++ ++ +
Sbjct: 80 GVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSH 139
Query: 120 VFGSYVAAGLPGDAISTFE-VMENYRCVRDVVALNTLMSAVCSG---GKTLEAYDYLQDV 175
V +Y +G A+ ++ V+E Y V DV+A N+L+S + G + YD + D
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 176 KKEIRPDGDTYAILMEGWEREGNA-VGAKETFAEMVIESGWDPTNEPA---YDSFLCTLI 231
+ D + IL++G EG VG K +IE W P Y++ +
Sbjct: 200 GDSV--DNYSTCILVKGMCNEGKVEVGRK------LIEGRWGKGCIPNIVFYNTIIGGYC 251
Query: 232 KGPD--------------GIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
K D G ++ F +M + C G L VK+ +R++ +
Sbjct: 252 KLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVW 311
Query: 278 FWEVMLGRK------------------TTLQPTTSMYNSMLALYFYHNDLETARKMMDDM 319
F ++ K +P + YN ++ E A +D+
Sbjct: 312 FLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEA 371
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+G P++L+Y + + K ++ AS++ +M + C PD
Sbjct: 372 SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 8/226 (3%)
Query: 172 LQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
LQ ++ +PD TY IL+ G G+ A ++ I+ G P + Y+ + L
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL-IDRGVSP-DAAIYNMLMSGLC 461
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
K A F M DR P Y ++ ++ D A + L + ++
Sbjct: 462 K-TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS--LSVEKGVKV 518
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
+N+M+ + L+ A M+ M PD TY+ + +K + + A ++F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 352 SEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDL 397
M KN+C P+ + I + D MA + +K E RDL
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK---EMQLRDL 621
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 110/270 (40%), Gaps = 25/270 (9%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y + ++D ++ FD + ++ + + ++ + +G+ +A++
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545
Query: 140 MENYRCVRDVVALNTLMSAVCSG---GKTLEAYDYLQDVKKEIRPDGDTYAILMEGWERE 196
M V D +T++ ++ + Y++ K + +P+ TY L+ G+ +
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME--KNKCKPNVVTYTSLINGFCCQ 603
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
G+ A+ETF EM + N Y + + +L K + +AV +++ M +C P
Sbjct: 604 GDFKMAEETFKEMQLRDLV--PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 257 RFYKAALEQCVKDHDVRM---------------AEFFWEVMLGRKTTLQPTTSMYNSMLA 301
+ L+ VK ++ +EFF + + + YNS L
Sbjct: 662 VTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRM---KSDGWSDHAAAYNSALV 718
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTY 331
H ++TA D MV +G PD +++
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGFSPDPVSF 748
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 13/268 (4%)
Query: 94 LFDA--MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
++DA M+D + M +P ++ + ++ + +A+ ME DVV
Sbjct: 167 VYDALYMFDQMVGMGYKPNVV---IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
N+L+S +CS G+ +A + + K+EI PD T+ L++ +EG A+E + EM+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 211 IESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDH 270
S DP + S L + + EA + F M + C+P + Y + K
Sbjct: 284 RRS-LDP--DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 271 DVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
V + F E + ++ ++ T + Y ++ Y L A ++ MV+ G P+ +
Sbjct: 341 KVEHGMKLFCE--MSQRGVVRNTVT-YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 330 TYNLMFRFLIKGRKLRDASRVFSEMVKN 357
TYN++ L K+ A + ++M KN
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 6/282 (2%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+N ++D L K+ D D +N M K + T+ S+ ++G DA M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAV 200
DV N L+ A G+ EA ++ ++ +++ + PD TY++L+ G
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 201 GAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYK 260
A+E F MV G P + S L + +K F M R Y
Sbjct: 309 EAEEMFGFMV-SKGCFP--DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 261 AALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMV 320
++ + + +AE + M+ + P YN +L + +E A ++ DM
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMV--FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 321 YRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
G D +TYN++ R + K ++ DA ++ + +PD
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 119/348 (34%), Gaps = 78/348 (22%)
Query: 47 DVEDVLKLSYDIPSHAVKFFRWAGHRLLH-DHTPYSWNLVVDVLGKNLLFDAMWDAINSM 105
D +L + + V + W ++L H + N++++ + + M
Sbjct: 83 DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 106 AKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKT 165
K S+ TF S+ + DA+ F+ M +VV NT++ +C +
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 166 LEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYD 224
A D L ++K+ I PD TY L+ G G W
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR----------------WS-------- 238
Query: 225 SFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG 284
+A + M R YP + + A ++ CVK+ V AE F+E
Sbjct: 239 --------------DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE---- 280
Query: 285 RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
+M+ R PD +TY+L+ L +L
Sbjct: 281 ---------------------------------EMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEH 392
+A +F MV C PD I Y ++ MK++ CE+
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF-CEMSQ 354
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 124/306 (40%), Gaps = 44/306 (14%)
Query: 59 PSHAVKFF-RWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATF 117
P A+ F ++ HD+ YS ++ L K+ FDA+ + + R + F
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSS--LIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 119
Query: 118 ASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK 177
+ Y AG AI F + ++ CVR + +LNTL++ + G+ +A + K
Sbjct: 120 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD 179
Query: 178 -EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG 236
+RP+ ++ IL++G+ + + W+
Sbjct: 180 MRLRPNSVSFNILIKGF----------------LDKCDWEA------------------- 204
Query: 237 IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
A K FD M + P + Y + + ++ D+ A+ E M+ K ++P +
Sbjct: 205 ---ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI--KKRIRPNAVTF 259
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
++ + A+K+M DM YRG P + Y ++ L K ++ +A + EM K
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319
Query: 357 NECVPD 362
PD
Sbjct: 320 RRIKPD 325
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 237 IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
+ +A FFD +D R P + ++ + D A ++ ML + +QP+ Y
Sbjct: 167 LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML--EMEVQPSVVTY 224
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
NS++ ++D+ A+ +++DM+ + P+++T+ L+ + L + +A ++ +M
Sbjct: 225 NSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEY 284
Query: 357 NECVPDQPN 365
C P N
Sbjct: 285 RGCKPGLVN 293
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 142/342 (41%), Gaps = 9/342 (2%)
Query: 32 VEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGK 91
+E ALE +++N + V+K + +FF WA R + S+ LV+D+L +
Sbjct: 47 IEPALEPLVPFLSKNIITSVIKDEVN-RQLGFRFFIWA-SRRERLRSRESFGLVIDMLSE 104
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
+ D W + + + F + +Y G+ A+ +F M+ + C DV
Sbjct: 105 DNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFT 164
Query: 152 LNTLMSAVCSGGK--TLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
N ++ + L Y + +K P+ T+ ILM+G ++G A++ F +M
Sbjct: 165 YNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
G P N Y + L + +A K F M+ YP + A L+ K
Sbjct: 225 T-GRGISP-NRVTYTILISGLCQRGSA-DDARKLFYEMQTSGNYPDSVAHNALLDGFCKL 281
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
RM E F + L K Y+S++ F A ++ +M+ + PD +
Sbjct: 282 G--RMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDII 339
Query: 330 TYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIR 371
Y ++ + L K K+ DA ++ S M PD +A I+
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 23/273 (8%)
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ D + M +P LI+L + G DA+ + M + V ++
Sbjct: 164 LVDRMVEMGHKPTLITLNALVN---GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 158 AVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWD 216
+C G+T A + L+ ++ ++I+ D Y+I+++G ++G+ A F EM I+ G+
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GF- 278
Query: 217 PTNEPAYDSFLCTLIKG-------PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
A TLI+G DG K M R+ P + + A ++ VK+
Sbjct: 279 ----KADIIIYTTLIRGFCYAGRWDDG----AKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
+R AE + M+ R + P T Y S++ + N L+ A M+D MV +G P+
Sbjct: 331 GKLREAEELHKEMIQR--GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 330 TYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
T+N++ K + D +F +M V D
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 142/350 (40%), Gaps = 45/350 (12%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+++++D L K+ D ++ N M + + + ++ + AG D M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAV 200
+ DVVA + L+ GK EA + ++ +++ I PD TY L++G+ +E N +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE-NQL 368
Query: 201 GAKETFAEMVIESGWDPTNEPAYDSFL---C----------------------------T 229
++++ G P N ++ + C T
Sbjct: 369 DKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 230 LIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFWEVMLGR 285
LI+G + A + F M RR P + YK L+ C + E F ++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI---E 484
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
K+ ++ +YN ++ + ++ A + + +G PD TYN+M L K L
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 346 DASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRR 395
+A +F +M ++ P+ + IR +L DA + K+ +E +R
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL----IEEIKR 590
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 6/287 (2%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H Y++++ ++ + + M K + T +S+ Y + DA++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWER 195
+ M D TL+ + K EA + Q V++ +PD TY ++ G +
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
G+ A +M E+ N +++ + +L K + AV F M + P
Sbjct: 236 RGDIDLALNLLNKM--EAARIKANVVIFNTIIDSLCKYRH-VEVAVDLFTEMETKGIRPN 292
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+ Y + + A ML +K + P +N+++ +F L A K+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKK--INPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
++M+ R PD++TYNL+ +L +A ++F MV +C+P+
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 15/295 (5%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +P TF ++ +A++ + M C D+V T++
Sbjct: 174 ALVDQMVEMGYKPDTF---TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G A + L ++ I+ + + +++ + + A + F EM + G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK-GI 289
Query: 216 DPTNEPAYDSF---LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
P N Y+S LC + D A + +M +++ P + + A ++ K+ +
Sbjct: 290 RP-NVVTYNSLINCLCNYGRWSD----ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
AE E M+ R ++ P T YN ++ + HN L+ A++M MV + P+ TYN
Sbjct: 345 VEAEKLHEEMIQR--SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ K +++ D +F EM + V + I+ + D A V+K
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 14/283 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ VV+ L K D + +N M ++ F ++ S A+ F M
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E +VV N+L++ +C+ G+ +A L + ++K+I P+ T+ L++ + +EG
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
V A++ EM I+ DP + Y+ LI G + + EA + F M + C P +
Sbjct: 345 VEAEKLHEEM-IQRSIDP-DTITYN----LLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 257 RFYKAALEQCVKDHDVR-MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+ Y + K V E F E+ + L T Y +++ +F D ++A+ +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREM---SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
MV D +TY+++ L KL A +F + K+E
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 105/262 (40%), Gaps = 6/262 (2%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++ M +R L T+ +V G A++ ME R +VV NT++ ++C
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 162 GGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
A D +++ K IRP+ TY L+ G A + M +E +P N
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM-LEKKINP-NV 328
Query: 221 PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWE 280
+++ + K + EA K + M R P Y + + + A+ ++
Sbjct: 329 VTFNALIDAFFK-EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 281 VMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIK 340
M+ + P YN+++ + +E ++ +M RG +++TY + + +
Sbjct: 388 FMVSKDCL--PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 341 GRKLRDASRVFSEMVKNECVPD 362
A VF +MV N D
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTD 467
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 153/382 (40%), Gaps = 64/382 (16%)
Query: 59 PSHAVKFFRWAGHRLLHDHTPYSWNLVVDVL--------GKNLL------------FDAM 98
P A KFF+W+ R H+ S+ +V +L ++L FD +
Sbjct: 122 PKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVL 181
Query: 99 WDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSA 158
W N PG F ++F + G+ +AI F M+ +R + N L+
Sbjct: 182 WSTRNVCV--PGF---GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 159 VCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP 217
GKT + + +D + RP TY I+++ +EG+ A+ F EM G P
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR-GLVP 295
Query: 218 TNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCYP--------------------GL 256
+ Y+S + G G + + V FF+ M+D C P GL
Sbjct: 296 -DTVTYNSMIDGF--GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 257 RFYKA----ALEQCVKDHDVRMAEFFWEVMLG---------RKTTLQPTTSMYNSMLALY 303
FY+ L+ V + + F E M+ R+ L P Y S++
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 304 FYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+L A ++ ++M+ G + +TY + L ++++A +F +M +P+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 364 PNCDAAIRIYLDNRDAFMAMKV 385
+ +A I ++ ++ A+++
Sbjct: 473 ASYNALIHGFVKAKNMDRALEL 494
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 12/285 (4%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
T +++N+++D + K +A M R + T+ S+ + G D + F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWERE 196
E M++ C DV+ N L++ C GK ++ +++K ++P+ +Y+ L++ + +E
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
G A + + +M G P NE Y S + K + +A + + M +
Sbjct: 381 GMMQQAIKFYVDMR-RVGLVP-NEYTYTSLIDANCK-IGNLSDAFRLGNEMLQVGVEWNV 437
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTT--LQPTTSMYNSMLALYFYHNDLETARK 314
Y A ++ ++ AE + G+ T + P + YN+++ + +++ A +
Sbjct: 438 VTYTALIDGLCDAERMKEAE----ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNEC 359
+++++ RG PD L Y L K+ A V +EM EC
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM--KEC 536
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 9/217 (4%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQ-DVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+ NTL++ C G +EA Y+ ++ PD TY + G R A + F
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ- 265
EM ++G NE +Y + L + I EA+ M+D C P +R Y ++
Sbjct: 214 KEMT-QNGCH-RNEVSYTQLIYGLFEAKK-IDEALSLLVKMKDDNCCPNVRTYTVLIDAL 270
Query: 266 CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF 325
C F ++ ++ ++P MY ++ + + L+ A +++ M+ G
Sbjct: 271 CGSGQKSEAMNLFKQM---SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 326 PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
P+ +TYN + + K + + A + S+M++ VPD
Sbjct: 328 PNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPD 363
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 130/321 (40%), Gaps = 14/321 (4%)
Query: 48 VEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAK 107
V V+K D P A++ F + HT ++ V++ LG F+AM + + M +
Sbjct: 10 VTAVIKCQKD-PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRE 68
Query: 108 RPGLISL-ATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTL 166
G L + +Y G +A++ FE M+ Y C V + N +MS + G
Sbjct: 69 NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFD 128
Query: 167 EAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS 225
+A+ Y++ + I PD ++ I M+ + + A M S N AY
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM--SSQGCEMNVVAY-- 184
Query: 226 FLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVM 282
CT++ G + E + F M L + L K DV+ E + +
Sbjct: 185 --CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 283 LGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGR 342
+ R P YN + +L+ A +M+ ++ +G PD +TYN + L K
Sbjct: 243 IKRGVL--PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 343 KLRDASRVFSEMVKNECVPDQ 363
K ++A +MV PD
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDS 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 12/219 (5%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D NTL++ C GG A + D V PD TY L++G EG A F
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDG---IREAVKFFDSMRDRRCYPGLRFYKAAL 263
E + G P N Y+ TLIKG I EA + + M ++ P ++ + +
Sbjct: 380 NE-ALGKGIKP-NVILYN----TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
K V A+ +VM+ + P +N ++ Y +E A +++D M+ G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYF--PDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
PD TYN + L K K D + MV+ C P+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 10/305 (3%)
Query: 60 SHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFAS 119
+ A+ F A + + + L+ + + ++ +A A N M+++ + + TF
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA-NEMSEKGLIPEVQTFNI 431
Query: 120 VFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGK---TLEAYDYLQDVK 176
+ G DA +VM + D+ N L+ + K LE D + D
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD-- 489
Query: 177 KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG 236
+ PD TY L+ G + ET+ MV E G P N ++ L +L +
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMV-EKGCAP-NLFTFNILLESLCRYRK- 546
Query: 237 IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
+ EA+ + M+++ P + ++ K+ D+ A + M + +T Y
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPTY 605
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
N ++ + ++ A K+ +MV R PD TY LM K + + EM++
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 357 NECVP 361
N +P
Sbjct: 666 NGFIP 670
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 14/314 (4%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+S+N V+ + + + N M SL T+ + ++ AG +A+ +
Sbjct: 178 FSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKE 237
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGN 198
M+ D+V +L+ C G+ +V ++ P TY L+ G+ + G
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI---REAVKFFDSMRDRRCYPG 255
A E F E +IE G P N Y LI G G+ +EA++ + M ++ P
Sbjct: 298 LKEASEIF-EFMIERGVRP-NVYTYTG----LIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
Y + + KD V A E+M R+T +P YN +L DL+ A K+
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRT--RPDNITYNILLGGLCAKGDLDEASKL 409
Query: 316 MDDMVYRGAF--PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
+ M+ ++ PD ++YN + L K +L A ++ +V+ D+ + +
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 374 LDNRDAFMAMKVWK 387
L D AM++WK
Sbjct: 470 LKAGDVNKAMELWK 483
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 8/264 (3%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
+N M ++ + T+ + GL DA+ E+M+ R D + N L+ +C+
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 162 GGKTLEAYDYLQDVKKE---IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPT 218
G EA L + K+ PD +Y L+ G +E A + + +V + G
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG--AG 457
Query: 219 NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFF 278
+ + L + +K D + +A++ + + D + Y A ++ K + +A+
Sbjct: 458 DRVTTNILLNSTLKAGD-VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 279 WEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFL 338
M R + LQP+ YN +L+ L+ A ++ ++M FPD +++N+M
Sbjct: 517 LCKM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 339 IKGRKLRDASRVFSEMVKNECVPD 362
+K ++ A + M + PD
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPD 598
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 146/335 (43%), Gaps = 10/335 (2%)
Query: 33 EKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKN 92
EKALE ++V V +L++ +I + ++FF+WAG R H ++ ++ L +
Sbjct: 81 EKALEVLKLKVDHRLVRSILEIDVEI-NVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEA 139
Query: 93 LLFDAMWDAINSMAKRPGL-ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
L+ M+ I + + + +S A + + + A + A+S F + +C
Sbjct: 140 RLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSST 199
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKKE--IRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
N+++ + G+ + ++ ++ E PD TY+ L+ +E+ G A F EM
Sbjct: 200 YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
++ PT E Y + L K + +A+ F+ M+ C P + Y ++ K
Sbjct: 260 K-DNCMQPT-EKIYTTLLGIYFK-VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
V A F++ ML + L P N+++ + +E + +M P +
Sbjct: 317 GRVDEAYGFYKDML--RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 330 TYNLMFRFLIKGR-KLRDASRVFSEMVKNECVPDQ 363
+YN + + L + + + + S F +M + P +
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSE 409
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 18/280 (6%)
Query: 89 LGKN----LLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYR 144
LG+N LFD M D N M + + ++ G Y G A+ FE M+
Sbjct: 246 LGRNDSAIRLFDEMKD--NCMQPTEKI-----YTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 145 CVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAK 203
C V L+ + G+ EAY + +D+ ++ + PD LM + G
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 204 ETFAEMVIESGWDPT-NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAA 262
F+EM + W T +Y++ + L + + E +FD M+ P Y
Sbjct: 359 NVFSEMGM---WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 263 LEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR 322
++ K + V A E M + P + Y S++ E A ++ ++
Sbjct: 416 IDGYCKTNRVEKALLLLEEM--DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 323 GAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
S Y +M + K KL +A +F+EM PD
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 79 PYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFE 138
P ++ +++ LGK ++A + + + G +S +A + + G +A+ F
Sbjct: 444 PAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFN 503
Query: 139 VMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREG 197
M+N DV A N LMS + G EA L+ +++ R D +++ I++ G+ R G
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFL-CTLIKGPDGIREAVKFFDSMRDR 250
A E F E + SG P + Y++ L C G EA + M+D+
Sbjct: 564 VPRRAIEMF-ETIKHSGIKP-DGVTYNTLLGCFAHAGM--FEEAARMMREMKDK 613
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 8/244 (3%)
Query: 124 YVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE--IRP 181
Y +G+ A F+ M C R V + N L+SA + K EA +++ ++ I P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 182 DGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAV 241
D TY +++ R+G+ F E+ ++G++P + ++++ L + + E
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELE-KNGFEP-DLISFNTLLEEFYRR-ELFVEGD 248
Query: 242 KFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLA 301
+ +D M+ + P +R Y + + ++ A +VM + + P YN+++
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVM--KTEGISPDVHTYNALIT 306
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
Y N+LE K ++M +G PD++TY ++ L K L A V E +K++ +
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL- 365
Query: 362 DQPN 365
+PN
Sbjct: 366 SRPN 369
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 6/252 (2%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
S+ TF ++ AGL DA+ F M + + V N ++ C G +A+++L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 173 QDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+++ +K I PD +Y L+ G G A AK F + + G NE Y L
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG-LHKGNCELNEICYTGLLHGFC 623
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
+ + EA+ M R L Y ++ +K D ++ FF + L+P
Sbjct: 624 R-EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL--FFGLLKEMHDRGLKP 680
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
+Y SM+ D + A + D M+ G P+ +TY + L K + +A +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 352 SEMVKNECVPDQ 363
S+M VP+Q
Sbjct: 741 SKMQPVSSVPNQ 752
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 153 NTLMSAVCSGGKTLEA---YDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
N L+ ++C G K EA +D + + +RP+ TY+IL++ + R G A EM
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIG--LRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
V G++ +V ++S+ + C G
Sbjct: 429 V-----------------------DTGLKLSVYPYNSLINGHCKFG-------------- 451
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
D+ AE F M+ +K L+PT Y S++ Y + A ++ +M +G P
Sbjct: 452 -DISAAEGFMAEMINKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 330 TYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
T+ + L + +RDA ++F+EM + P++ + I Y + D A + K
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 6/259 (2%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
++ T+ S+ G Y + G A+ + M + TL+S + G +A
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 173 QDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
++ + ++P+ TY +++EG+ EG+ A E EM E G P + +Y + L
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT-EKGIVP-DTYSYRPLIHGLC 588
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
EA F D + C Y L ++ + A + M+ R L
Sbjct: 589 LTGQA-SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
Y ++ H D + ++ +M RG PD + Y M K ++A ++
Sbjct: 648 VC--YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 352 SEMVKNECVPDQPNCDAAI 370
M+ CVP++ A I
Sbjct: 706 DLMINEGCVPNEVTYTAVI 724
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 47/320 (14%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
S+N+V++ L + + + M +R + T+ ++ Y G A+ M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNA 199
+ V+ +L+ ++C G A ++L ++ + + P+ TY L++G+ ++G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
A EM ++G+ P+ Y++ LI G + +A+ + M+++ P +
Sbjct: 397 NEAYRVLREMN-DNGFSPS-VVTYNA----LINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 257 RFYKAALEQCVKDHDV-----------------------------------RMAEFFWEV 281
Y L + +DV + A +E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 282 MLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKG 341
ML + L P Y +++ Y DLE A ++ ++MV +G PD +TY+++ L K
Sbjct: 511 ML--RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 342 RKLRDASRVFSEMVKNECVP 361
+ R+A R+ ++ E VP
Sbjct: 569 SRTREAKRLLLKLFYEESVP 588
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 136/331 (41%), Gaps = 37/331 (11%)
Query: 95 FDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNT 154
D + M + L ++ T+ ++ Y D M ++++ N
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 155 LMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIES 213
+++ +C G+ E L ++ ++ D TY L++G+ +EGN A AEM +
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM-LRH 339
Query: 214 GWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALE--------- 264
G P+ Y S + ++ K + + A++F D MR R P R Y ++
Sbjct: 340 GLTPS-VITYTSLIHSMCKAGN-MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 265 ----------------------QCVKDHDV--RMAEFFWEVMLGRKTTLQPTTSMYNSML 300
+ H V +M + + ++ L P Y+++L
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 301 ALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECV 360
+ + D++ A ++ +MV +G PD++TY+ + + + R+ ++A ++ EM++
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 361 PDQPNCDAAIRIYLDNRDAFMAMKVWKCEVE 391
PD+ A I Y D A+++ VE
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 17/259 (6%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
S+ T+ ++ + G DAI+ E M+ DVV+ +T++S C EA
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 173 QD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
++ V+K I+PD TY+ L++G+ + A + + EM + G P +E Y + +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM-LRVGL-PPDEFTYTALINAYC 531
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAE-----FFWEVMLGRK 286
D + +A++ + M ++ P + Y + K R A+ F+E +
Sbjct: 532 MEGD-LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 287 TTLQP-----TTSMYNSMLAL---YFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFL 338
T + + S+++L + + A ++ + M+ + PD YN+M
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 339 IKGRKLRDASRVFSEMVKN 357
+ +R A ++ EMVK+
Sbjct: 651 CRAGDIRKAYTLYKEMVKS 669
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 41/336 (12%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGL-ISLATFASVFGSYVAAGLPGDAIST 136
TP ++ V+ L K+ + + + + + F V +Y +G +AI
Sbjct: 71 TPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEV 130
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD--YLQDVKKEIRPDGDTYAILMEGWE 194
F + N+RCV LN L+ + ++LE ++ + +R + T+ IL++
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190
Query: 195 REGNAVGAKETFAEMVIESGW-DPTNEPAYDSFLCT------------------------ 229
R G A E M +S DP S +C
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPG 250
Query: 230 ----------LIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFW 279
L++G G +E V + M+ R P L Y L+ + D D A+ +
Sbjct: 251 LRDYTVVMRFLVEGGRG-KEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLF 309
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
+ +L P YN + ND+E A KMM M G+ P+ +TYN++ + L+
Sbjct: 310 DELLLLGLA--PDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 340 KGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLD 375
K L A ++ EM N + D I Y++
Sbjct: 368 KAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIE 403
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 139/338 (41%), Gaps = 15/338 (4%)
Query: 33 EKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKN 92
E++L + VT V VL+ + + +++FF WA + T + + L +
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASH 124
Query: 93 LLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFE-VMENYRCVRDVVA 151
+++MW + M IS T + Y G A+ F V + C + V
Sbjct: 125 KKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV 184
Query: 152 LNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
N+L+ A+C AY ++ ++K ++PD TYAIL+ GW G A+E EM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 211 IESGWDPTNEPAYDSFLCTLIKG--PDGIREAVK-FFDSMRDRRCYPGLRFYKAALEQCV 267
G++P PA L LI+G G E+ K M P ++ + +E
Sbjct: 245 -RRGFNP---PARGRDL--LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAIS 298
Query: 268 KDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
K +V E ++ K L Y +++ ++ A +++++ V G P
Sbjct: 299 KSGEVEFCIEMYYTAC---KLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKP 355
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQP 364
Y + + + + DA FS+M P++P
Sbjct: 356 FPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRP 393
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 152/344 (44%), Gaps = 21/344 (6%)
Query: 22 EIISTTPSVAVEKALEDSGIRVTQNDVEDVLK-LSYDIPSHAVKFFRWAGHRLLHDHTPY 80
+I+S + V L+ +++T D V+K + + A++ F W R H
Sbjct: 133 KILSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNAR 192
Query: 81 SWNLVVDVLGK----NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
++ VLG+ +L + A ++ R + + ++ G Y +G A
Sbjct: 193 MVAAILGVLGRWNQESLAVEIFTRAEPTVGDR-----VQVYNAMMGVYSRSGKFSKAQEL 247
Query: 137 FEVMENYRCVRDVVALNTLMSA-VCSGGKTLEAYDYLQDVKKE--IRPDGDTYAILMEGW 193
+ M CV D+++ NTL++A + SGG T L D+ + +RPD TY L+
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSAC 307
Query: 194 EREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI-REAVKFFDSMRDRRC 252
R+ N GA + F +M E+ + Y++ + + G G+ EA + F + +
Sbjct: 308 SRDSNLDGAVKVFEDM--EAHRCQPDLWTYNAMIS--VYGRCGLAAEAERLFMELELKGF 363
Query: 253 YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
+P Y + L ++ + + ++ M +K YN+++ +Y L+ A
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQM--QKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 313 RKMMDDMV-YRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV 355
++ DM G PD++TY ++ L K + +A+ + SEM+
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 12/267 (4%)
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ D + + RP I+ T S + L G A+ FE ME +RC D+ N ++S
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSR--DSNLDG-AVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 158 AVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWD 216
G EA +++ K PD TY L+ + RE N KE + +M + G+
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ-KMGFG 399
Query: 217 PTNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCY-PGLRFYKAALEQCVKDHDVRM 274
+E Y++ + + G G + A++ + M+ P Y ++ K +
Sbjct: 400 -KDEMTYNTIIH--MYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
A ML ++PT Y++++ Y E A M+ G PD+L Y++M
Sbjct: 457 AAALMSEML--DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 335 FRFLIKGRKLRDASRVFSEMVKNECVP 361
L++G + R A ++ +M+ + P
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTP 541
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 10/300 (3%)
Query: 59 PSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFA 118
P A + A + H + +++ GK L+ + ++ + L T+
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 119 SVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAY---DYLQDV 175
S+ +Y G A + F M V ++N L+ A+C G+ E Y + LQD+
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 176 KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPD 235
+I + ++++ + R GN K+ ++ M +G+ PT Y + L KG
Sbjct: 852 GFKI--SKSSILLMLDAFARAGNIFEVKKIYSSMK-AAGYLPTIR-LYRMMIELLCKGKR 907
Query: 236 GIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
+R+A M + L + + L+ D + ++ + ++T L+P +
Sbjct: 908 -VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI--KETGLEPDETT 964
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV 355
YN+++ +Y E +M M G P TY + K + L A ++F E++
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 240 AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSM 299
AV+ D +R+ P Y L C +D ++ A +E M + QP YN+M
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC--QPDLWTYNAM 338
Query: 300 LALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNEC 359
+++Y A ++ ++ +G FPD++TYN + + R V+ +M K
Sbjct: 339 ISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 360 VPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
D+ + I +Y +A++++K
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYK 426
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 114 LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQ 173
L T+ +V G P A++ ME + DVV NT++ +C +A+D
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 174 DVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
++ K I+PD TY L+ G A ++M +E +P + +++ + +K
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM-LEKNINP-DLVFFNALIDAFVK 332
Query: 233 GPDGIREAVKFFDSM-RDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQ 290
+ EA K +D M + + C+P + Y ++ K V E F E+ + L
Sbjct: 333 -EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM---SQRGLV 388
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
T Y +++ +F D + A+ + MV G PD +TYN++ L + A V
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 351 FSEMVKNE 358
F M K +
Sbjct: 449 FEYMQKRD 456
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 14/270 (5%)
Query: 97 AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLM 156
A+ D + M +P + TF ++ +A++ E M C D+V ++
Sbjct: 166 ALVDQMVEMGYQPDTV---TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 157 SAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+ +C G+ A + L ++K +I D Y +++G + + A + F +M + G
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GI 281
Query: 216 DP---TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
P T P S LC + D A + M ++ P L F+ A ++ VK+ +
Sbjct: 282 KPDVFTYNPLI-SCLCNYGRWSD----ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
AE ++ M+ K P YN+++ + + +E ++ +M RG +++TY
Sbjct: 337 VEAEKLYDEMVKSKHCF-PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ + R +A VF +MV + PD
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 11/278 (3%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ V++ L K D + +N M K + + ++ DA F M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNA 199
E DV N L+S +C+ G+ +A L D ++K I PD + L++ + +EG
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGL 256
V A++ + EMV P + AY+ TLIKG + E ++ F M R
Sbjct: 337 VEAEKLYDEMVKSKHCFP-DVVAYN----TLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y + + D A+ ++ M+ + P YN +L + ++ETA +
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMV--SDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
+ M R D +TY M L K K+ D +F +
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 126/317 (39%), Gaps = 38/317 (11%)
Query: 95 FDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRD------ 148
F + AI M K +ISL G + T+ + NY C R
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLG-------ISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 149 --------------VVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGW 193
+V LN+L++ C G + EA + Q V+ +PD T+ L+ G
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 194 EREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK--GPDGIREAVKFFDSMRDRR 251
+ A A MV++ G P + Y + + L K PD A+ + M +
Sbjct: 191 FQHNKASEAVALVERMVVK-GCQP-DLVTYGAVINGLCKRGEPD---LALNLLNKMEKGK 245
Query: 252 CYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLET 311
+ Y ++ K + A + M ++P YN +++ +
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKM--ETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 312 ARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE-CVPDQPNCDAAI 370
A +++ DM+ + PD + +N + +K KL +A +++ EMVK++ C PD + I
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 371 RIYLDNRDAFMAMKVWK 387
+ + + M+V++
Sbjct: 364 KGFCKYKRVEEGMEVFR 380
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 119/313 (38%), Gaps = 7/313 (2%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H Y++++ ++ + + M K S+ T S+ + +A++
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWER 195
+ M D V TL+ + K EA ++ V K +PD TY ++ G +
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
G A +M E G + Y++ + L K + +A F+ M + P
Sbjct: 228 RGEPDLALNLLNKM--EKGKIEADVVIYNTIIDGLCKYKH-MDDAFDLFNKMETKGIKPD 284
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+ Y + A ML + + P +N+++ + L A K+
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEK--NINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 316 MDDMV-YRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
D+MV + FPD + YN + + K +++ + VF EM + V + I +
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 375 DNRDAFMAMKVWK 387
RD A V+K
Sbjct: 403 QARDCDNAQMVFK 415
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 15/247 (6%)
Query: 114 LATFASVFGSYVAAGLPGDAISTF-EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
L F ++ ++V G +A + E++++ C DVVA NTL+ C + E +
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 173 QDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+++ ++ + + TY L+ G+ + + A+ F +MV G P + Y+ L L
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHP-DIMTYNILLDGLC 437
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTT-LQ 290
+ + A+ F+ M+ R + Y +E K V E W++ ++
Sbjct: 438 NNGN-VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV---EDGWDLFCSLSLKGVK 493
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P Y +M++ + E A + +M G P+S TYN + R +LRD
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR-----ARLRDGDEA 548
Query: 351 FS-EMVK 356
S E++K
Sbjct: 549 ASAELIK 555
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 134/320 (41%), Gaps = 37/320 (11%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
+PY++ VV + + D ++ + M ++ + ++ +++ GDA+
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWERE 196
+ M+ D+ N+L+ + + EA +L + V+ ++P+ TY + G+ E
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY-IE 534
Query: 197 GNAVGAKETFAEMVIESGWDPT--------NE-----------PAYDSFLCTLIKG---- 233
+ + + + + + E G P NE AY S + I G
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 234 ----------PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVML 283
D + +A + F MR + P + Y + K +++ A ++ M+
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 284 GRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRK 343
+ L P +YN +L + ++E A++++D+M +G P+++TY + K
Sbjct: 655 --EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 344 LRDASRVFSEMVKNECVPDQ 363
L +A R+F EM VPD
Sbjct: 713 LAEAFRLFDEMKLKGLVPDS 732
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 119/293 (40%), Gaps = 33/293 (11%)
Query: 95 FDAMWDAINSMAKRPGLISLATFASVFGSYVAAG---LPGDAISTFEVMENYRCVRDVV- 150
D WD M +R + + T+ + ++ AG L D + F+ + +R V
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL--FKTEKEFRTATLNVD 259
Query: 151 -ALNTLMSAVCSGGKTLE-AYDYLQDVKKEIRP------------------DGDTYAILM 190
AL S +C G L+ YD L D +I+ D TY++L+
Sbjct: 260 GALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319
Query: 191 EGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVK-FFDSMRD 249
+G + NA AK EMV S YD +C + K +G+ E K FD M
Sbjct: 320 DGLLKGRNADAAKGLVHEMV--SHGINIKPYMYDCCICVMSK--EGVMEKAKALFDGMIA 375
Query: 250 RRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDL 309
P + Y + +E ++ +VR M R + P T Y +++ DL
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT--YGTVVKGMCSSGDL 433
Query: 310 ETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ A ++ +M+ G P+ + Y + + ++ + DA RV EM + PD
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 38/279 (13%)
Query: 119 SVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-K 177
+ Y G +A S + M + + D LM+ + K +A + ++++ K
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 178 EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFL---------- 227
I PD +Y +L+ G+ + GN A F EMV E G P N Y+ L
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV-EEGLTP-NVIIYNMLLGGFCRSGEIE 679
Query: 228 ---------------------CTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAAL 263
CT+I G + EA + FD M+ + P Y +
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 264 EQCVKDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYR 322
+ C + +DV R F G ++ P ++ N + E ++MD R
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 323 GAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
P+ +TYN+M +L K L A +F +M +P
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 6/265 (2%)
Query: 99 WDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSA 158
++ + M KR +IS T+ +V ++G A + + M C +VV TL+
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 159 VCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP 217
+ +A L+++K++ I PD Y L+ G + A+ EMV E+G P
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV-ENGLKP 520
Query: 218 TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
N Y +F+ I+ + A K+ MR+ P + + K V A
Sbjct: 521 -NAFTYGAFISGYIEASE-FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 278 FWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRF 337
+ M+ + T Y ++ F ++ ++ A ++ +M +G PD +Y ++
Sbjct: 579 AYRSMVDQGILGDAKT--YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 338 LIKGRKLRDASRVFSEMVKNECVPD 362
K ++ AS +F EMV+ P+
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPN 661
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 10/263 (3%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++ ++D L K + + + M+K ++ ++ G + G+A
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGN 198
M C VV+ N L+ +C GK EA ++++ ++ +PD TY+IL+ G R+
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 199 AVGAKETFAEMVIESGW--DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
A E + + ++SG D LC++ K D A+ +M R C L
Sbjct: 550 IDLALELWHQF-LQSGLETDVMMHNILIHGLCSVGKLDD----AMTVMANMEHRNCTANL 604
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y +E K D A W M K LQP YN+++ + A +
Sbjct: 605 VTYNTLMEGFFKVGDSNRATVIWGYMY--KMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Query: 317 DDMVYRGAFPDSLTYNLMFRFLI 339
DD G FP T+N++ R ++
Sbjct: 663 DDARNHGIFPTVYTWNILVRAVV 685
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 234 PDGIREAVKFFDSMRDR-RCYPGLRFYKAALEQCVKDHD-VRMAEFFWEVMLGRKTTLQP 291
PD +A+ F MR+ C P +R Y L V+ V++ F + P
Sbjct: 94 PD---QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF---ETAGVAP 147
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
YN ++ + + E AR +D M G PD +Y+ + L K KL DA +F
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 352 SEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTA 401
EM + PD + I +L +D AM++W R LED++
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD-------RLLEDSS 250
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 7/263 (2%)
Query: 96 DAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTL 155
D N + +R I + T+ ++ G + G +++ + +ME+ V ++V+ N L
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNIL 365
Query: 156 MSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESG 214
+ + GK EA + + K D TY I + G G A E +ES
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE--VESS 423
Query: 215 WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRM 274
+ AY S + L K + EA M A + ++D +
Sbjct: 424 GGHLDVYAYASIIDCLCK-KKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 482
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
A FF M K +PT YN ++ A + +M+ G PD TY+++
Sbjct: 483 ASFFLREM--GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 335 FRFLIKGRKLRDASRVFSEMVKN 357
L + RK+ A ++ + +++
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQS 563
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 11/320 (3%)
Query: 72 RLLHDHTPY----SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAA 127
RLL D + Y + N+++ L K D M + L T++S+ A
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 128 GLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYA 187
G A S F ++ + DVV NT++ C GK E+ + + ++ + + +Y
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 188 ILMEGWEREGNAVGAKETFAEMVIES-GWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDS 246
IL++G G A + M + D T + LC + G + +A+
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC--VNGY--VNKALGVMQE 419
Query: 247 MRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYH 306
+ + + Y + ++ K + A + M K ++ + + N+++
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM--SKHGVELNSHVCNALIGGLIRD 477
Query: 307 NDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNC 366
+ L A + +M G P ++YN++ L K K +AS EM++N PD
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 367 DAAIRIYLDNRDAFMAMKVW 386
+ +R +A+++W
Sbjct: 538 SILLCGLCRDRKIDLALELW 557
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 22/275 (8%)
Query: 96 DAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTL 155
+ M + M++R ++ T+ S+ Y GL +A FE+++ + V D L
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 156 MSAVCSGGKTLEA---YDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
M C G+ +A +D + ++ +R + L+ G+ + G V A++ F+ M
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIG--VRTNTTICNSLINGYCKSGQLVEAEQIFSRM--- 392
Query: 213 SGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
+ W + +P + ++ TL+ G + EA+K D M + P + Y L+ +
Sbjct: 393 NDW--SLKPDHHTY-NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 270 ---HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
HDV W++ML R + +++L F D A K+ ++++ RG
Sbjct: 450 GAFHDVLS---LWKMMLKRGVNADEISC--STLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
D++T N+M L K K+ +A + + C P
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENY-RCVRDVVALNTLMSAVCSGGKTLEAYDY 171
S F + Y GL +A+ F+ M NY R + + L + V G + + Y
Sbjct: 154 SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVY 213
Query: 172 LQDVKKEIRPDGDTYAILMEGWEREGNA----VGAKETFAEMVIESGWDPTNEPAYDSFL 227
Q + E+ PD T +I++ + R GN V AKET + + +E N Y+S +
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLE-----LNVVTYNSLI 268
Query: 228 C--TLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGR 285
+I +G+ ++ M +R + Y + ++ K + AE +E++ +
Sbjct: 269 NGYAMIGDVEGMTRVLRL---MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
K L MY ++ Y + A ++ D+M+ G ++ N + K +L
Sbjct: 326 K--LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 346 DASRVFSEMVKNECVPDQ 363
+A ++FS M PD
Sbjct: 384 EAEQIFSRMNDWSLKPDH 401
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 120/346 (34%), Gaps = 76/346 (21%)
Query: 112 ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDY 171
+++ T+ S+ Y G +M R+VV +L+ C G EA
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 172 LQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL 230
+ +K K++ D Y +LM+G+ R G A M IE G TN +S +
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM-IEIGVR-TNTTICNSLINGY 376
Query: 231 IKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ 290
K + EA + F M D W +L+
Sbjct: 377 CKSGQLV-EAEQIFSRMND-----------------------------W--------SLK 398
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P YN+++ Y ++ A K+ D M + P +TYN++ + + D +
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL 458
Query: 351 FSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTANXXXXXXXX 410
+ M+K D+ +C + D AMK+W
Sbjct: 459 WKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW------------------------ 494
Query: 411 XXXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEFLYEELL 456
E+++ RG+ + TL+ + L K K +E+L
Sbjct: 495 -----------ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 8/213 (3%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
+V+ N ++ + C G+ +A L+ ++K+I PD T++ L+ + +E A+E +
Sbjct: 44 NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIY 103
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
EM+ S + T Y+S + K D + +A + DSM + C P + + +
Sbjct: 104 KEMLRWSIFPTT--ITYNSMIDGFCK-QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
Query: 267 VKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF 325
K V E F E+ + + T Y +++ + DL+ A+ ++++M+ G
Sbjct: 161 CKAKRVDNGMEIFCEM---HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 326 PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
PD +T++ M L ++LR A + ++ K+E
Sbjct: 218 PDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 176 KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP---TNEPAYDSFLCTLIK 232
+ I+ D +++ ++GN + A+ F EM E G P T DSF C +
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMH-EKGIFPNVLTYNCMIDSF-CHSGR 60
Query: 233 GPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPT 292
D A + M +++ P + + A + VK+ V AE ++ ML + ++ PT
Sbjct: 61 WSD----ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML--RWSIFPT 114
Query: 293 TSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFS 352
T YNSM+ + + ++ A++M+D M +G PD +T++ + K +++ + +F
Sbjct: 115 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 174
Query: 353 EM 354
EM
Sbjct: 175 EM 176
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 48/330 (14%)
Query: 35 ALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLL 94
+LEDS + + ++ D A F+W R D S +L++ VLG +
Sbjct: 113 SLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGCDDQK--SCDLMIWVLGNHQK 170
Query: 95 FDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNT 154
F+ W I M A F + Y AA AI TF++M+ ++ A
Sbjct: 171 FNIAWCLIRDMFNVSKDTRKAMFL-MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQG 229
Query: 155 LMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGW-EREGNAVGAKETFAEMVIES 213
L+ A+C G +A +++ KK D + + +++ GW + AK + EM
Sbjct: 230 LLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREM---- 285
Query: 214 GWDPTNEPAYDSF--LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHD 271
+ P DS+ + + + ++++ +D M+ R PG+
Sbjct: 286 -GNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIE-------------- 330
Query: 272 VRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTY 331
+YNS++ + + + A K+M + G PDS+TY
Sbjct: 331 -----------------------VYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTY 367
Query: 332 NLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
N M R L + KL A V + M+ P
Sbjct: 368 NSMIRPLCEAGKLDVARNVLATMISENLSP 397
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 7/250 (2%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
TF + G A+ VM + C D+V NTL+ C + +A + +DV
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 176 KKE--IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG 233
K PD TY ++ G+ + G A +M + G PTN ++ + K
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM-LRLGIYPTN-VTFNVLVDGYAKA 325
Query: 234 PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
+ + A + M C+P + + + ++ + V WE M R + P
Sbjct: 326 GE-MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG--MFPNA 382
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
Y+ ++ N L AR+++ + + P YN + K K+ +A+ + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 354 MVKNECVPDQ 363
M K +C PD+
Sbjct: 443 MEKKKCKPDK 452
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 145 CVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAK 203
C DVV +++S C GK EA L D ++ I P T+ +L++G+ + G + A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 204 ETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYK 260
E +M+ + P +F +LI G + + + ++ M R +P Y
Sbjct: 333 EIRGKMISFGCF-----PDVVTFT-SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 261 AALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMV 320
+ ++ + A + + QP MYN ++ + + A ++++M
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPF--MYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 321 YRGAFPDSLTYN-LMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+ PD +T+ L+ +KGR + +A +F +MV C PD+
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGR-MFEAVSIFHKMVAIGCSPDK 487
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 6/234 (2%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILM 190
DA+ F+ ++ D N L+ +C GK +A + L + PD TY L+
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 191 EGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDR 250
+G+ + A E F ++ S P + Y S + K +REA D M
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSP-DVVTYTSMISGYCKAGK-MREASSLLDDMLRL 306
Query: 251 RCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLE 310
YP + ++ K ++ AE M+ P + S++ Y +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF--PDVVTFTSLIDGYCRVGQVS 364
Query: 311 TARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQP 364
++ ++M RG FP++ TY+++ L +L A + ++ + +P QP
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP-QP 417
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 230 LIKGPDGI---REAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV-RMAEFFWEVMLGR 285
LI+G G+ +A++ M C P + Y ++ K +++ + +E F +V G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG- 270
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
+ P Y SM++ Y + A ++DDM+ G +P ++T+N++ K ++
Sbjct: 271 -SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 346 DASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
A + +M+ C PD + I Y ++W+
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 7/250 (2%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
TF + G A+ VM + C D+V NTL+ C + +A + +DV
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 176 KKE--IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG 233
K PD TY ++ G+ + G A +M + G PTN ++ + K
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM-LRLGIYPTN-VTFNVLVDGYAKA 325
Query: 234 PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
+ + A + M C+P + + + ++ + V WE M R + P
Sbjct: 326 GE-MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG--MFPNA 382
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
Y+ ++ N L AR+++ + + P YN + K K+ +A+ + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 354 MVKNECVPDQ 363
M K +C PD+
Sbjct: 443 MEKKKCKPDK 452
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 145 CVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAK 203
C DVV +++S C GK EA L D ++ I P T+ +L++G+ + G + A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 204 ETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPGLRFYK 260
E +M+ + P +F +LI G + + + ++ M R +P Y
Sbjct: 333 EIRGKMISFGCF-----PDVVTFT-SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 261 AALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMV 320
+ ++ + A + + QP MYN ++ + + A ++++M
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPF--MYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 321 YRGAFPDSLTYN-LMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+ PD +T+ L+ +KGR + +A +F +MV C PD+
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGR-MFEAVSIFHKMVAIGCSPDK 487
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 6/234 (2%)
Query: 132 DAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILM 190
DA+ F+ ++ D N L+ +C GK +A + L + PD TY L+
Sbjct: 189 DAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 191 EGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDR 250
+G+ + A E F ++ S P + Y S + K +REA D M
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSP-DVVTYTSMISGYCKAGK-MREASSLLDDMLRL 306
Query: 251 RCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLE 310
YP + ++ K ++ AE M+ P + S++ Y +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF--PDVVTFTSLIDGYCRVGQVS 364
Query: 311 TARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQP 364
++ ++M RG FP++ TY+++ L +L A + ++ + +P QP
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP-QP 417
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 230 LIKGPDGI---REAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV-RMAEFFWEVMLGR 285
LI+G G+ +A++ M C P + Y ++ K +++ + +E F +V G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSG- 270
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
+ P Y SM++ Y + A ++DDM+ G +P ++T+N++ K ++
Sbjct: 271 -SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 346 DASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
A + +M+ C PD + I Y ++W+
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 111/274 (40%), Gaps = 11/274 (4%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
+ S PG ++ VFG AG+ +A+S + ME C D V N L++A
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGK---AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 162 GGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
G + EA ++ + KK + P+ TY +++ + + G A + F M E+G P N
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK-EAGCVP-NT 421
Query: 221 PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV-KDHDVRMAEFFW 279
Y++ L L K E +K M+ C P + L C K D + F
Sbjct: 422 CTYNAVLSLLGKKSRS-NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFR 480
Query: 280 EVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLI 339
E+ + +P +N++++ Y A KM +M G TYN + L
Sbjct: 481 EM---KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 340 KGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
+ R V S+M P + + ++ Y
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCY 571
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 15/286 (5%)
Query: 84 LVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENY 143
+ V +LG+ + ++ + + L+ + + ++ +Y G AI FE M+
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 144 RCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGD-----TYAILMEGWEREGN 198
+V N ++ GK ++ + V E+R G T + ++ REG
Sbjct: 240 GPSPTLVTYNVILDVF---GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI-REAVKFFDSMRDRRCYPGLR 257
AKE FAE+ G++P Y++ L + G G+ EA+ M + C
Sbjct: 297 LREAKEFFAELK-SCGYEP-GTVTYNALL--QVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y + V+ + A E+M K + P Y +++ Y + A K+
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMM--TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFY 410
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
M G P++ TYN + L K + + ++ +M N C P++
Sbjct: 411 SMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 12/250 (4%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
TF ++ +Y G DA + M V N L++A+ G + + D+
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 176 K-KEIRPDGDTYAILMEGWEREGNAVGAKET---FAEMVIESGWDPTNEPAYDSFLCTLI 231
K K +P +Y+++++ + + GN +G + E I W +F C +
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
G + + F + P + + + L +++ AE E + R+ L P
Sbjct: 613 AGSE------RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI--REDGLSP 664
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
YNS++ +Y + A +++ + PD ++YN + + + +++A R+
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 352 SEMVKNECVP 361
SEM + P
Sbjct: 725 SEMTERGIRP 734
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 128/339 (37%), Gaps = 72/339 (21%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
I M K+ + + T+ +V +Y AG +A+ F M+ CV + N ++S +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 162 GGKTLEAYDYLQDVK-------------------------------KEIR-----PDGDT 185
++ E L D+K +E++ PD DT
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 186 YAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFD 245
+ L+ + R G+ V A + + EM +G++ Y++ L L + D R
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMT-RAGFNAC-VTTYNALLNALARKGD-WRSGENVIS 550
Query: 246 SMRDRRCYPGLRFYKAALEQCVK----------DHDVRMAEFFWEVMLGRKTTL------ 289
M+ + P Y L+ K ++ ++ + F ML R L
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 290 -----------------QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
+P ++NSML+++ +N + A +++ + G PD +TYN
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIR 371
+ ++ + A + + K++ PD + + I+
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 121/305 (39%), Gaps = 8/305 (2%)
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ D I P L+S + + + G DA++ F + +VV+ N L+
Sbjct: 233 LLDEIIVKGGEPNLVS---YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 158 AVCSGGKTLEAYDYLQDVKKEIR-PDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWD 216
+C G+ EA L ++ R P TY IL+ G A + EM +
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 217 PTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAE 276
+Y+ + L K + VK D M RRC P Y A C +H+ ++ E
Sbjct: 350 RVTATSYNPVIARLCK-EGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC--EHNSKVQE 406
Query: 277 FFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR 336
F+ + T Y S++ + A +++ +M G PD+ TY+ + R
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 337 FLIKGRKLRDASRVFSEMVKNE-CVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRR 395
L A V S M ++E C P N +A I R +AM+V++ VE R
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 396 DLEDT 400
E T
Sbjct: 527 PNETT 531
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 11/328 (3%)
Query: 39 SGIRVTQNDVEDVLKLSYDIPSHAVKFF-RWAGHRLLHDHTPYSWNLVVDVLGKNLLFDA 97
S +++ + + L+ +D P A+K + + H + Y+ L V L K F
Sbjct: 27 SSGKISVSKAKSTLRKEHD-PDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSD 85
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ I S P + ++++ SY A + A+ TFE M+ Y R V+ N L++
Sbjct: 86 IETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLN 145
Query: 158 AVCSGG---KTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESG 214
A K + +D + +I PD +Y IL++ + G A E +M + G
Sbjct: 146 ACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGK-G 204
Query: 215 WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRM 274
+ T A+ + L +L K + + A ++ M + C Y + K+ R+
Sbjct: 205 MEVTT-IAFTTILSSLYKKGE-LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERV 262
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
E E+ L+P T YN ++ Y L+ A+K+ + + P++ T+ +
Sbjct: 263 KELIEEM---SSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTL 319
Query: 335 FRFLIKGRKLRDASRVFSEMVKNECVPD 362
L R +F + V +PD
Sbjct: 320 IFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 44/287 (15%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++++++D KN WD IN M S FE
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNA---------------------------SNFEA 552
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR--PDGDTYAILMEGWEREG 197
E V NT+++ +C G+T +A + LQ++ KE R +Y +++G+ + G
Sbjct: 553 NE--------VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
+ A ET+ EM E+G P N + S + K + + A++ M+ L
Sbjct: 605 DTDSAVETYREMS-ENGKSP-NVVTFTSLINGFCKS-NRMDLALEMTHEMKSMELKLDLP 661
Query: 258 FYKAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y A ++ K +D++ A F E+ + L P S+YNS+++ + ++ A +
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSEL---PELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 317 DDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
MV G D TY M L+K + AS ++SE++ VPD+
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 131/302 (43%), Gaps = 17/302 (5%)
Query: 59 PSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGL-ISLATF 117
P AVK FR R + ++L V K D + M + G+ S T+
Sbjct: 255 PEEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 118 ASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK 177
SV ++V G +A+ + M + V+A +L++ C G + +A D +++
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 178 E-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLC-TLIKG-- 233
E + PD +++++E + + A E + M + A S L T+I+G
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM-------KSVRIAPSSVLVHTMIQGCL 426
Query: 234 -PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPT 292
+ A++ F+ + G K L C K V A F ++M + ++P
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFC-KQGKVDAATSFLKMM--EQKGIEPN 483
Query: 293 TSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFS 352
YN+M+ + +++ AR + +M+ +G P++ TY+++ K + ++A V +
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 353 EM 354
+M
Sbjct: 544 QM 545
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 108/252 (42%), Gaps = 6/252 (2%)
Query: 112 ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDY 171
+S ++ S+ +V G A+ T+ M +VV +L++ C + A +
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 172 LQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL 230
++K E++ D Y L++G+ ++ + A F+E+ E G P N Y+S L +
Sbjct: 648 THEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP-ELGLMP-NVSVYNS-LISG 704
Query: 231 IKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ 290
+ + A+ + M + L Y ++ +KD ++ +A + +L +
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL--DLGIV 762
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P ++ ++ A KM+++M + P+ L Y+ + + L +A R+
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Query: 351 FSEMVKNECVPD 362
EM++ V D
Sbjct: 823 HDEMLEKGIVHD 834
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 32/270 (11%)
Query: 121 FGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEI 179
F + G +A + M++ V DV+ TL+ C GK ++A D + + + +
Sbjct: 395 FDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
Query: 180 RPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIRE 239
PD TY +L+ G R G+ E + M E P +S + + ++E
Sbjct: 455 SPDLITYNVLVSGLARNGHEEEVLEIYERMKAEG---PKPNAVTNSVIIEGLCFARKVKE 511
Query: 240 AVKFFDSMRDR-----------RCYPGL--RFYKA--ALEQCVKDHDVRMAEFFWEVMLG 284
A FF S+ + C GL + YKA LE ++ V + FF + G
Sbjct: 512 AEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLR-KSVYIKLFFSLCIEG 570
Query: 285 ---------RKTT---LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
+K + ++P SM M+ + N++ A+ + D MV RG PD TY
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+M + +L+ A +F +M + PD
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPD 660
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 6/264 (2%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQD 174
T+ ++ + G +A F M D V L++ C G +A+ +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 175 VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGP 234
++ P+ TY L++G +EG+ A E EM + G P N Y+S + L K
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQP-NIFTYNSIVNGLCKSG 505
Query: 235 DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTS 294
+ I EAVK Y ++ K ++ A+ + MLG+ LQPT
Sbjct: 506 N-IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIV 562
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
+N ++ + H LE K+++ M+ +G P++ T+N + + L+ A+ ++ +M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 355 VKNECVPDQPNCDAAIRIYLDNRD 378
PD + ++ + R+
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARN 646
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 12/234 (5%)
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILME 191
AI F +V + N ++ VC G+ EA+ L ++ K PD +Y+ ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS---FLCTLIKGPDGIREAVKFFDSMR 248
G+ R G + E++ G P N Y S LC + K + EA + F M
Sbjct: 290 GYCRFGE-LDKVWKLIEVMKRKGLKP-NSYIYGSIIGLLCRICK----LAEAEEAFSEMI 343
Query: 249 DRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHND 308
+ P Y ++ K D+R A F+ M R T P Y ++++ + D
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT--PDVLTYTAIISGFCQIGD 401
Query: 309 LETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ A K+ +M +G PDS+T+ + K ++DA RV + M++ C P+
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 6/241 (2%)
Query: 115 ATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD 174
TF + Y AG DA M C +VV TL+ +C G A + L +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 175 V-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG 233
+ K ++P+ TY ++ G + GN A + E E+ + Y + + K
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKS 539
Query: 234 PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
+ + +A + M + P + + + + E ML + + P
Sbjct: 540 GE-MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK--GIAPNA 596
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
+ +NS++ Y N+L+ A + DM RG PD TY + + K R +++A +F E
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 354 M 354
M
Sbjct: 657 M 657
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 136/336 (40%), Gaps = 20/336 (5%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTP--YSWNLVVDVLGK 91
K LE + T+ L Y H FR H + +P ++ ++D L K
Sbjct: 415 KGLEPDSVTFTE------LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
D+ + ++ M K ++ T+ S+ +G +A+ E D V
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 152 LNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
TLM A C G+ +A + L++ + K ++P T+ +LM G+ G + E +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG-MLEDGEKLLNWM 587
Query: 211 IESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV 267
+ G P N ++S + C + ++ A + M R P + Y+ ++
Sbjct: 588 LAKGIAP-NATTFNSLVKQYCI----RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 268 KDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPD 327
K +++ A F ++ M G+ ++ + S Y+ ++ + AR++ D M G D
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSV--SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
++ KG++ E+++N V +Q
Sbjct: 701 KEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 6/264 (2%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQD 174
T+ ++ + G +A F M D V L++ C G +A+ +
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 175 VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGP 234
++ P+ TY L++G +EG+ A E EM + G P N Y+S + L K
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQP-NIFTYNSIVNGLCKSG 505
Query: 235 DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTS 294
+ I EAVK Y ++ K ++ A+ + MLG+ LQPT
Sbjct: 506 N-IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK--GLQPTIV 562
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
+N ++ + H LE K+++ M+ +G P++ T+N + + L+ A+ ++ +M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 355 VKNECVPDQPNCDAAIRIYLDNRD 378
PD + ++ + R+
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARN 646
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 12/234 (5%)
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILME 191
AI F +V + N ++ VC G+ EA+ L ++ K PD +Y+ ++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS---FLCTLIKGPDGIREAVKFFDSMR 248
G+ R G + E++ G P N Y S LC + K + EA + F M
Sbjct: 290 GYCRFGE-LDKVWKLIEVMKRKGLKP-NSYIYGSIIGLLCRICK----LAEAEEAFSEMI 343
Query: 249 DRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHND 308
+ P Y ++ K D+R A F+ M R T P Y ++++ + D
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT--PDVLTYTAIISGFCQIGD 401
Query: 309 LETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ A K+ +M +G PDS+T+ + K ++DA RV + M++ C P+
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 6/241 (2%)
Query: 115 ATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD 174
TF + Y AG DA M C +VV TL+ +C G A + L +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 175 V-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG 233
+ K ++P+ TY ++ G + GN A + E E+ + Y + + K
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAGLNADTVTYTTLMDAYCKS 539
Query: 234 PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
+ + +A + M + P + + + + E ML + + P
Sbjct: 540 GE-MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK--GIAPNA 596
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
+ +NS++ Y N+L+ A + DM RG PD TY + + K R +++A +F E
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 354 M 354
M
Sbjct: 657 M 657
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 136/336 (40%), Gaps = 20/336 (5%)
Query: 34 KALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTP--YSWNLVVDVLGK 91
K LE + T+ L Y H FR H + +P ++ ++D L K
Sbjct: 415 KGLEPDSVTFTE------LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
D+ + ++ M K ++ T+ S+ +G +A+ E D V
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 152 LNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV 210
TLM A C G+ +A + L++ + K ++P T+ +LM G+ G + E +
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG-MLEDGEKLLNWM 587
Query: 211 IESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV 267
+ G P N ++S + C + ++ A + M R P + Y+ ++
Sbjct: 588 LAKGIAP-NATTFNSLVKQYCI----RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 268 KDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPD 327
K +++ A F ++ M G+ ++ + S Y+ ++ + AR++ D M G D
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSV--SVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
++ KG++ E+++N V +Q
Sbjct: 701 KEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQ 736
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 20/240 (8%)
Query: 145 CVRDVVAL--NTLMSAVCSGGKTLE-AYDYLQDVKKE--IRPDGDTYAILMEGWEREGNA 199
+RD+V ++L+ V G K LE A + + ++ IR D DT+ +++
Sbjct: 107 SIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKL 166
Query: 200 VGAKETFAEMVIESG--WDPTNEPAYDSFLCTLIK--GPDGI-REAVKFFDSMRDRRCYP 254
A+ +M E G WD + LI+ G GI +E+VK F M+D
Sbjct: 167 NHARCILLDMP-EKGVPWD-------EDMFVVLIESYGKAGIVQESVKIFQKMKDLGVER 218
Query: 255 GLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
++ Y + + ++ MA+ ++ M+ ++PT YN ML +F LETA +
Sbjct: 219 TIKSYNSLFKVILRRGRYMMAKRYFNKMVSE--GVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
+DM RG PD T+N M + +K+ +A ++F EM N+ P + I+ YL
Sbjct: 277 FFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL 336
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 125/321 (38%), Gaps = 44/321 (13%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
TPYS+N +++ K LFD W + M + +T+ + G DA
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWERE 196
M DVV+ NTLM GK +EA D++ +I P TY L++G
Sbjct: 367 SSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 197 GNAVGAKETFAEMV------------------IESGWDPTNEPAYDSFLCTLIKGPDGIR 238
GN GA+ EM +++G YD L IK PDG
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK-PDGYA 481
Query: 239 EA------VKFFDSMRDRRCY----------PGLRFYKAALEQ-CVKDHDVRMAEFFWEV 281
++ DS + R + P L Y ++ C + V+ EF ++
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 282 MLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKG 341
+ L P Y +++ Y + + AR + D+M+ + +P +TY ++ K
Sbjct: 542 F---RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKA 598
Query: 342 RKLRDASRVFSEMVKNECVPD 362
+L A + +EM K P+
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPN 619
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 122/283 (43%), Gaps = 14/283 (4%)
Query: 83 NLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMEN 142
N+V+ VL + + + +M + + ++ TF ++ S AG + M+
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 143 YRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE---IRPDGDTYAILMEGWEREGNA 199
V N L++ GK EA + D+++ + P ++ L+EG+ ++G
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY--SFNPLIEGYCKQGLF 324
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
A EM + +G PT Y+ ++C L I +A + SM P + Y
Sbjct: 325 DDAWGVTDEM-LNAGIYPTTS-TYNIYICALCDFGR-IDDARELLSSM----AAPDVVSY 377
Query: 260 KAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDM 319
+ +K A ++ + R + P+ YN+++ +LE A+++ ++M
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDL--RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ FPD +TY + + +K L A+ V+ EM++ PD
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 11/181 (6%)
Query: 108 RPGLI-SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTL 166
R GL+ T+ +V Y+ G A + ++ M R V+ L+ G+
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 167 EAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDS 225
+A+ Y ++KK +RP+ T+ L+ G + GN A +M E P N+ +Y
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM--EEEGIPPNKYSYTM 660
Query: 226 FL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVM 282
+ C K E VK + M D+ P ++A + KDH+ R EF ++
Sbjct: 661 LISKNCDFEKW----EEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLL 716
Query: 283 L 283
L
Sbjct: 717 L 717
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 37/281 (13%)
Query: 123 SYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRP 181
S+ G AIS ++ N D V NT++S +C G EAY +L + VK I P
Sbjct: 138 SFCKVGRLSFAIS---LLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILP 194
Query: 182 DGDTYAILMEGWEREGNAVGAK----------------------------ETFAEMVIES 213
D +Y L++G+ + GN V AK E + +MV+ S
Sbjct: 195 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVM-S 253
Query: 214 GWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVR 273
G+DP + + S + L KG + E M + YP Y ++ K + R
Sbjct: 254 GFDP-DVVTFSSIINRLCKGGK-VLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYR 311
Query: 274 MAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNL 333
A + M+ R + +Y ++ F DL A K ++ P+ +TY
Sbjct: 312 HALALYSQMVVRGIPVDLV--VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 334 MFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
+ L K L A + ++M++ +P+ + I Y+
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 17/230 (7%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFA 207
DVV+ N L+S + GK + Y +K I PD T+ I+M ++G++ G
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG------ 591
Query: 208 EMVIESGWDPTNEPAYDSFL--CTLIKG---PDG-IREAVKFFDSMRDRRCYPGLRFYKA 261
I WD L C ++ G +G + EA+ + M +P L Y+
Sbjct: 592 ---ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 262 ALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVY 321
L+ K E +L L + +YN+++A + A +M DM
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKL--SRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 322 RGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIR 371
RG PD++T+N + G +R A +S M++ P+ + IR
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 130/304 (42%), Gaps = 32/304 (10%)
Query: 45 QNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINS 104
Q D E +LKL + S +K + S N+VV +L +N + +N
Sbjct: 586 QGDSEGILKLWDKMKSCGIK------------PSLMSCNIVVGMLCENGKMEEAIHILNQ 633
Query: 105 MAK---RPGLISLATFASVFGSYVAAGLPGDAI-STFEVMENYRCVRDVVALNTLMSAVC 160
M P L + F + A DAI T E + +Y NTL++ +C
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKHKRA----DAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 161 SGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTN 219
G T +A + D++ + PD T+ LM G+ + A T++ M +E+G P N
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM-MEAGISP-N 747
Query: 220 EPAYDSFLCTLIKGPDG---IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAE 276
Y+ T+I+G I+E K+ M+ R P Y A + K +++ +
Sbjct: 748 VATYN----TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803
Query: 277 FFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR 336
+ M+ L P TS YN +++ + + AR+++ +M RG P++ TY M
Sbjct: 804 TIYCEMIA--DGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Query: 337 FLIK 340
L K
Sbjct: 862 GLCK 865
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 118/293 (40%), Gaps = 14/293 (4%)
Query: 87 DVLGKNLLFDAMWD--------AINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFE 138
DV+ N+L M A M ++ +ATF + S G + ++
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 597
Query: 139 VMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREG 197
M++ +++ N ++ +C GK EA L Q + EI P+ TY I ++ +
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
A +T E ++ G + + Y++ + TL K ++A M R P
Sbjct: 658 RADAIFKTH-ETLLSYGIKLSRQ-VYNTLIATLCK-LGMTKKAAMVMGDMEARGFIPDTV 714
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
+ + + VR A + VM+ + + P + YN+++ ++ K +
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMM--EAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAI 370
+M RG PD TYN + K ++ + ++ EM+ + VP + I
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLI 825
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 81 SWNLVVDVLGKNLLFD---AMWDAINSMAKRPG--LISLATFASVFGSYVAAGLPGDAIS 135
++N V++ L +N FD ++DA+ P ++L TF + Y A G +A+
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 136 TFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWE 194
F M +++C D ++ N LM+ +C EA Y + +K ++PD TY +LM+
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 195 REGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSM 247
+EG + + + ++ES P N Y+ LIK + +A FFD M
Sbjct: 432 KEGK-IDEGAAYYKTMVESNLRP-NLAVYNRLQDQLIKA-GKLDDAKSFFDMM 481
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 18/255 (7%)
Query: 116 TFASVFGSYVAAGLPGDAISTFE--VMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQ 173
+ + Y + +A+ +E V EN + +A N ++ A+ GK EA
Sbjct: 275 VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFD 334
Query: 174 DVKKEIRP------DGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSF- 226
VKKE P + T+ +++ G+ G A E F +M D P SF
Sbjct: 335 AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM-----GDFKCSPDTLSFN 389
Query: 227 -LCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGR 285
L + + + EA K + M ++ P Y ++ C K+ + +++ M+
Sbjct: 390 NLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMV-- 447
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
++ L+P ++YN + L+ A+ D MV + D Y + R L + +L
Sbjct: 448 ESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDE-AYKFIMRALSEAGRLD 506
Query: 346 DASRVFSEMVKNECV 360
+ ++ EM+ ++ V
Sbjct: 507 EMLKIVDEMLDDDTV 521
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 135/345 (39%), Gaps = 42/345 (12%)
Query: 31 AVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
A E+AL + G R+ VLK D ++A+ FF W + H +++ +V LG
Sbjct: 312 AAEEALHNFGFRMDAYQANQVLK-QMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLG 370
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+ F + ++ M + + T+ + SY A +A++ F M+ C D V
Sbjct: 371 RAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 151 ALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
TL+ G A D Q +++ + PD TY++++ + G+ A F EM
Sbjct: 431 TYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEM 490
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD 269
V + CT P+ + + + R L+ Y+
Sbjct: 491 VGQG--------------CT----PNLVTFNIMIALHAKARNYETALKLYR--------- 523
Query: 270 HDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSL 329
D++ A F QP Y+ ++ + + LE A + +M + PD
Sbjct: 524 -DMQNAGF------------QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 330 TYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYL 374
Y L+ K + A + + M++ P+ P C++ + +L
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 11/279 (3%)
Query: 175 VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI--K 232
V+ +P+ TY L+ + R A F +M E+G +P + Y CTLI
Sbjct: 386 VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ-EAGCEP-DRVTY----CTLIDIH 439
Query: 233 GPDGIRE-AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
G + A+ + M++ P Y + K + A + M+G+ T P
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT--P 497
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
+N M+AL+ + ETA K+ DM G PD +TY+++ L L +A VF
Sbjct: 498 NLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVF 557
Query: 352 SEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTANXXXXXXXXX 411
+EM + VPD+P + ++ + A + ++ ++ R T N
Sbjct: 558 AEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRV 617
Query: 412 XXXPEAVKYAEDMIGRGIKLTSSTLSKLKHRLVKGRKEF 450
EA + M+ G+ + T + L R F
Sbjct: 618 HRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNF 656
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 16/264 (6%)
Query: 105 MAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGK 164
M K L +L T++++ Y G A ++ + + +VV TL+ C +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 165 TLEAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIES-GWDPTNEPA 222
+ A ++ VK + P+ Y L+ G + GN + A +EM ES P
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM--ESLNLSP----- 372
Query: 223 YDSFLCT-LIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFF 278
D F T LI G D + EA + F M++ R +P Y + + K++++ A
Sbjct: 373 -DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 279 WEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFL 338
M + ++P +++++ Y D++ A + +M +G PD +TY +
Sbjct: 432 CSEMTA--SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 339 IKGRKLRDASRVFSEMVKNECVPD 362
K +++A R++S+M++ P+
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPN 513
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 5/193 (2%)
Query: 170 DYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCT 229
DY + + + PD Y +L + ++G KE + + G P N Y ++
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQG-LYSKKEKLLDEMTSLGIKP-NVYIYTIYILD 243
Query: 230 LIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTL 289
L + + + EA K F+ M+ P L Y A ++ K +VR A ++ +L L
Sbjct: 244 LCR-DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL--VAEL 300
Query: 290 QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASR 349
P ++ +++ + +L TAR + MV G P+ YN + K + +A
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 350 VFSEMVKNECVPD 362
+ SEM PD
Sbjct: 361 LLSEMESLNLSPD 373
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 7/269 (2%)
Query: 107 KRPGLIS-LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKT 165
K+ G+I + ++ + SY + PG A F +M R +VV N L+ A S G
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 166 LEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYD 224
EA + + ++++ I+P+ + L+ R V + +S N AY+
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS--AAQSRGINLNTAAYN 499
Query: 225 SFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG 284
S + + I + + +A+ + SMR ++ + + + A + + M
Sbjct: 500 SAIGSYINAAE-LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-- 556
Query: 285 RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
++ T +Y+S+L Y + A + + M G PD + Y M K
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIY 373
A +F EM N PD C A +R +
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAF 645
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 132/337 (39%), Gaps = 23/337 (6%)
Query: 29 SVAVEKALEDSGIR---VTQNDVEDVLKLSYDIPSHAVKFFRW-AGHRLLHDHTPYSWNL 84
++ V K + D+G+ VT N V K S A+ +F G ++ D T + N+
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY-SKALSYFELMKGAKVRPDTTTF--NI 288
Query: 85 VVDVLGKNLLFDAMWDAINSMAK-----RPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
++ L K D NSM + RP ++ TF S+ Y G + + FE
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVV---TFTSIMHLYSVKGEIENCRAVFEA 345
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
M ++V+ N LM A G + A L D+K+ I PD +Y L+ + R
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCYPGLR 257
AKE F M E N Y++ + G +G + EAV+ F M P +
Sbjct: 406 PGKAKEVFLMMRKER--RKPNVVTYNALIDAY--GSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
L C + + R L T+ YNS + Y +LE A +
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINL--NTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
M + DS+T+ ++ + K +A EM
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
S +T+ ++ + ++G +A+ + M + D+V N ++SA SG + +A Y
Sbjct: 212 SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF 271
Query: 173 QDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+ +K ++RPD T+ I++ + G +
Sbjct: 272 ELMKGAKVRPDTTTFNIIIYCLSKLGQS-------------------------------- 299
Query: 232 KGPDGIREAVKFFDSMRDRR--CYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTL 289
+A+ F+SMR++R C P + + + + ++ +E M+ L
Sbjct: 300 ------SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE--GL 351
Query: 290 QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASR 349
+P YN+++ Y H TA ++ D+ G PD ++Y + + R+ A
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 350 VFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKV 385
VF M K P+ +A I Y N F+A V
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSN--GFLAEAV 445
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 15/220 (6%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETF 206
+V N +++ +C GK +A +L ++ I+P TY L++G+ G GA+
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 207 AEMVIESGWDP---TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAAL 263
+EM G+ P T P S++C + + +RE M++ P Y +
Sbjct: 284 SEMK-SKGFQPDMQTYNPIL-SWMCNEGRASEVLRE-------MKEIGLVPDSVSYNILI 334
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
C + D+ MA + + M+ K + PT YN+++ F N +E A ++ ++ +G
Sbjct: 335 RGCSNNGDLEMAFAYRDEMV--KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
DS+TYN++ + + A + EM+ + P Q
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 128/335 (38%), Gaps = 47/335 (14%)
Query: 131 GDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAIL 189
G A M+ V D V+ N L+ + G A+ Y + VK+ + P TY L
Sbjct: 309 GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 190 MEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRD 249
+ G E N + A E + E G + Y+ + + D ++A D M
Sbjct: 369 IHGLFME-NKIEAAEILIREIREKGI-VLDSVTYNILINGYCQHGDA-KKAFALHDEMMT 425
Query: 250 RRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDL 309
P Y + + + + R A+ +E ++G+ ++P M N+++ + ++
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG--MKPDLVMMNTLMDGHCAIGNM 483
Query: 310 ETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAA 369
+ A ++ +M PD +TYN + R L K +A + EM + PD + +
Sbjct: 484 DRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 370 IRIYL---DNRDAFMAMKVWKCEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKYAEDMIG 426
I Y D + AFM RD +M+
Sbjct: 544 ISGYSKKGDTKHAFMV------------RD--------------------------EMLS 565
Query: 427 RGIKLTSSTLSKLKHRLVKGRKEFLYEELLRKWKS 461
G T T + L L K ++ L EELLR+ KS
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 141/306 (46%), Gaps = 16/306 (5%)
Query: 59 PSHAVKFFRWAG-HRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATF 117
P H +FF ++ H HT + N ++ ++G + D W+ + KR GL++ TF
Sbjct: 93 PVH--RFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKR-GLVNDKTF 149
Query: 118 ASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK 177
V + +A ++ F +M + + +V +N + +C EA +K+
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE 209
Query: 178 EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI 237
I+PD TY +++G+ G+ + A + + ++++ G+D E A + TL+K +
Sbjct: 210 FIKPDEITYRTMIQGFCDVGDLIEAAKLW-NLMMDEGFDVDIE-AGKKIMETLLK-KNQF 266
Query: 238 REAVKFFDSMRDRRC--YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
EA K F M +R G FY+ ++ K+ + MA ++ M R + T
Sbjct: 267 DEASKVFYVMVSKRGGDLDG-GFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLT-- 323
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV 355
+ S++ + A +++ + PD Y+ + + L+K ++ +A+ VF +M+
Sbjct: 324 WASLIYGLLVKRRVVEAYGLVEGV----ENPDISIYHGLIKGLVKIKRASEATEVFRKMI 379
Query: 356 KNECVP 361
+ C P
Sbjct: 380 QRGCEP 385
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 7/269 (2%)
Query: 107 KRPGLIS-LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKT 165
K+ G+I + ++ + SY + PG A F +M R +VV N L+ A S G
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 166 LEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYD 224
EA + + ++++ I+P+ + L+ R V + +S N AY+
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS--AAQSRGINLNTAAYN 367
Query: 225 SFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG 284
S + + I + + +A+ + SMR ++ + + + A + + M
Sbjct: 368 SAIGSYINAAE-LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-- 424
Query: 285 RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
++ T +Y+S+L Y + A + + M G PD + Y M K
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIY 373
A +F EM N PD C A +R +
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAF 513
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 133/337 (39%), Gaps = 23/337 (6%)
Query: 29 SVAVEKALEDSGIR---VTQNDVEDVLKLSYDIPSHAVKFFRW-AGHRLLHDHTPYSWNL 84
++ V K + D+G+ VT N V K S A+ +F G ++ D T ++N+
Sbjct: 100 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY-SKALSYFELMKGAKVRPDTT--TFNI 156
Query: 85 VVDVLGKNLLFDAMWDAINSMAK-----RPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
++ L K D NSM + RP ++ TF S+ Y G + + FE
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVV---TFTSIMHLYSVKGEIENCRAVFEA 213
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
M ++V+ N LM A G + A L D+K+ I PD +Y L+ + R
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRRCYPGLR 257
AKE F M E N Y++ + G +G + EAV+ F M P +
Sbjct: 274 PGKAKEVFLMMRKER--RKPNVVTYNALIDAY--GSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
L C + + R L T+ YNS + Y +LE A +
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINL--NTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
M + DS+T+ ++ + K +A EM
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 113 SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYL 172
S +T+ ++ + ++G +A+ + M + D+V N ++SA SG + +A Y
Sbjct: 80 SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYF 139
Query: 173 QDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+ +K ++RPD T+ I++ + G +
Sbjct: 140 ELMKGAKVRPDTTTFNIIIYCLSKLGQS-------------------------------- 167
Query: 232 KGPDGIREAVKFFDSMRDRR--CYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTL 289
+A+ F+SMR++R C P + + + + ++ +E M+ L
Sbjct: 168 ------SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE--GL 219
Query: 290 QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASR 349
+P YN+++ Y H TA ++ D+ G PD ++Y + + R+ A
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 350 VFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKV 385
VF M K P+ +A I Y N F+A V
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSN--GFLAEAV 313
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 112 ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDY 171
+S ++ S+ + G A++ +E M +V+ +LM+ +C + +A +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 172 LQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL 230
++K K ++ D Y L++G+ + N A F+E+ +E G +P+ +P Y+S L
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL-LEEGLNPS-QPIYNS----L 695
Query: 231 IKGPDGIREAVKFFDSMRDRRCYPGLRF----YKAALEQCVKDHDVRMA----------- 275
I G + V D + + GLR Y ++ +KD ++ +A
Sbjct: 696 ISGFRNLGNMVAALD-LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 276 ----EFFWEVMLG------------------RKTTLQPTTSMYNSMLALYFYHNDLETAR 313
E + V++ +K + P +YN+++A ++ +L+ A
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 314 KMMDDMVYRGAFPDSLTYNLM 334
++ D+M+ +G PD T++++
Sbjct: 815 RLHDEMLDKGILPDGATFDIL 835
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 114/279 (40%), Gaps = 5/279 (1%)
Query: 110 GLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVC-SGGKTLEA 168
GL ++ ++ G +A ME+ +VV+ N +M C L
Sbjct: 439 GLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR 498
Query: 169 YDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLC 228
+ ++K ++P+ TY+IL++G R + A E M S N Y + +
Sbjct: 499 IVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT--SSNIEVNGVVYQTIIN 556
Query: 229 TLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTT 288
L K + + + ++R Y + ++ K+ ++ A +E M G
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG--NG 614
Query: 289 LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDAS 348
+ P Y S++ +N ++ A +M D+M +G D Y + K + AS
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 349 RVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+FSE+++ P QP ++ I + + + A+ ++K
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 7/216 (3%)
Query: 150 VALNTLMSAVCSGGKTLEAYDYLQDVKKEIR--PDGDTYAILMEGWEREGNAVGAKETFA 207
V T+++ +C G+T +A + L ++ +E R +Y +++G+ +EG A +
Sbjct: 549 VVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYE 608
Query: 208 EMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV 267
EM +G P N Y S + L K + + +A++ D M+++ + Y A ++
Sbjct: 609 EMC-GNGISP-NVITYTSLMNGLCKN-NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 268 KDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPD 327
K ++ A + +L + L P+ +YNS+++ + ++ A + M+ G D
Sbjct: 666 KRSNMESASALFSELL--EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
TY + L+K L AS +++EM VPD+
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 24/315 (7%)
Query: 74 LHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDA 133
+H +T Y++N++ +V + F + D + M + L T+ ++ SY G +A
Sbjct: 232 IHPNT-YTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 134 ISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEG 192
+++M R V D+V +L+ +C G+ EA+ + + V + I+PD +Y L+
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 193 WEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDG-IRE-----AVKFFDS 246
+ +EG +K+ EM+ N D F C +I +G +RE AV F
Sbjct: 351 YCKEGMMQQSKKLLHEML-------GNSVVPDRFTCKVIV--EGFVREGRLLSAVNFVVE 401
Query: 247 MRDRRC---YPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALY 303
+R + + F +L C + ++ +P T YN+++
Sbjct: 402 LRRLKVDIPFEVCDFLIVSL--CQEGKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESL 457
Query: 304 FYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
+ +E A + + + D+ TY + L + + R+A + +EM +E PD
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
Query: 364 PNCDAAIRIYLDNRD 378
C A + Y D
Sbjct: 518 FICGALVYGYCKELD 532
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 124/299 (41%), Gaps = 55/299 (18%)
Query: 60 SHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFAS 119
S A++ R G + + +T + N ++D L K D + +NS KR ++ T+ +
Sbjct: 433 SGALEMMREMGQKGIKMNT-ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 120 VFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKT---LEAYDYLQDVK 176
+ + A+ ++ M+ + V N+L+ +C GKT +E +D L +
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE-- 549
Query: 177 KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCT-LIKG-- 233
+ PD T+ ++ G+ +EG A E + E I+ + P D++ C L+ G
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE-SIKHSFKP------DNYTCNILLNGLC 602
Query: 234 PDGIRE-AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPT 292
+G+ E A+ FF+++ + R +
Sbjct: 603 KEGMTEKALNFFNTLIEER--------------------------------------EVD 624
Query: 293 TSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVF 351
T YN+M++ + L+ A ++ +M +G PD TYN L++ KL + +
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 10/272 (3%)
Query: 98 MWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMS 157
+ DA+ S+ +P ++ T+ ++ GL +A E MEN + V N +
Sbjct: 332 LMDAMKSLKLQPDVV---TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 158 AVCSGGKTLEAYDYLQDV--KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGW 215
+C K ++++ PD TY L++ + + G+ GA E EM + G
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG-QKGI 447
Query: 216 DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA 275
N ++ L L K + EA +S R Y + ++ V A
Sbjct: 448 K-MNTITLNTILDALCK-ERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 276 EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMF 335
W+ M +K + PT S +NS++ +H E A + D++ G PD T+N +
Sbjct: 506 LEMWDEM--KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 336 RFLIKGRKLRDASRVFSEMVKNECVPDQPNCD 367
K ++ A ++E +K+ PD C+
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 132/331 (39%), Gaps = 55/331 (16%)
Query: 100 DAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM-ENYRCVRDVVALNTLMSA 158
+ + M K +++ TF + Y G DA+ E M ++ D V NT++ A
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249
Query: 159 VCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETF--AEMVIESGW 215
+ G+ + + L D+KK + P+ TY L+ G+ + G+ KE F E++ ++
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS---LKEAFQIVELMKQTNV 306
Query: 216 DPTNEPAYDSFLCT---LIKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC--- 266
P LCT LI G +RE ++ D+M+ + P + Y ++ C
Sbjct: 307 LPD--------LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 267 ------------VKDHDVRMAEFFWEVML------------GRKTT-------LQPTTSM 295
+++ V+ + + L RK P
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV 355
Y++++ Y DL A +MM +M +G +++T N + L K RKL +A + +
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 356 KNECVPDQPNCDAAIRIYLDNRDAFMAMKVW 386
K + D+ I + A+++W
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 127/286 (44%), Gaps = 13/286 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N ++ + K + + + M K + + T+ ++ Y G +A E+M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNA 199
+ + D+ N L++ +C+ G E + + +K +++PD TY L++G G +
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAV-KFFDSMRDRRCY-PGLR 257
+ A++ +M E+ N+ ++ L L K + REAV + + D + P +
Sbjct: 362 LEARKLMEQM--ENDGVKANQVTHNISLKWLCK--EEKREAVTRKVKELVDMHGFSPDIV 417
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVM--LGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
Y ++ +K D+ A E+M +G+K T ++ N++L L+ A +
Sbjct: 418 TYHTLIKAYLKVGDLSGA---LEMMREMGQKGIKMNTITL-NTILDALCKERKLDEAHNL 473
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
++ RG D +TY + + K+ A ++ EM K + P
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 137/316 (43%), Gaps = 35/316 (11%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++N +++ K F + + M K + + T+ + V G DA F+
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGN 198
M DV +L+S C G A+ ++ +K + P TY L++G + G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCYPG 255
+GA E + G + T TLI G + EA +D M +++ +
Sbjct: 380 -MGAAEILMNEMQSKGVNITQ-----VVFNTLIDGYCRKGMVDEASMIYDVM-EQKGFQA 432
Query: 256 LRFYKAALEQC---VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETA 312
F + C +K +D ++ + +M G ++ +T Y +++ +Y ++E A
Sbjct: 433 DVFTCNTIASCFNRLKRYD-EAKQWLFRMMEG---GVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV---------------FSEMVKN 357
+++ +M +G P+++TYN+M K K+++A ++ ++ ++
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 358 ECVPDQPNCDAAIRIY 373
EC+ D N D A+R++
Sbjct: 549 ECIAD--NVDEAMRLF 562
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 13/314 (4%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVF 121
+++ F++ ++ + + +++ +LG+ L D + + M + S+ ++ ++
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALI 183
Query: 122 GSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAY-DYLQDVKKE-I 179
+Y G ++ + M+N + ++ NT+++A GG E +++ E I
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 180 RPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIRE 239
+PD TY L+ G +G + AEMV + D P ++ L++ +R
Sbjct: 244 QPDIVTYNTLLSACAIRG--LGDE---AEMVFRTMNDGGIVPDLTTY-SHLVETFGKLRR 297
Query: 240 AVKFFD---SMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
K D M P + Y LE K ++ A + M T P + Y
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT--PNANTY 355
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
+ +L L+ + R++ +M PD+ TYN++ +G ++ +F +MV+
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 357 NECVPDQPNCDAAI 370
PD + I
Sbjct: 416 ENIEPDMETYEGII 429
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 129/311 (41%), Gaps = 26/311 (8%)
Query: 73 LLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGD 132
++ D T YS +V+ GK + + D + MA L + ++ + +Y +G +
Sbjct: 278 IVPDLTTYSH--LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKE 335
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR-----PDGDTYA 187
A+ F M+ C + + L++ G+ YD ++ + E++ PD TY
Sbjct: 336 AMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR----YDDVRQLFLEMKSSNTDPDAATYN 391
Query: 188 ILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIRE-AVKFFDS 246
IL+E + G F +MV E +P E Y+ + KG G+ E A K
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMV-EENIEPDME-TYEGIIFACGKG--GLHEDARKILQY 447
Query: 247 MRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ----PTTSMYNSMLAL 302
M P + Y +E A + E ++ T + P+ ++S+L
Sbjct: 448 MTANDIVPSSKAYTGVIEA------FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 303 YFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ ++ + ++ +V G + T+N +G K +A + + +M K+ C PD
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 363 QPNCDAAIRIY 373
+ +A + +Y
Sbjct: 562 ERTLEAVLSVY 572
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 104/273 (38%), Gaps = 68/273 (24%)
Query: 164 KTLEAYDYLQDVKKEI--RPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEP 221
++L + Y+Q ++I +P+ Y I++ REG E F EM P+
Sbjct: 123 RSLRLFKYMQ---RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM-------PSQGV 172
Query: 222 AYDSFLCTLI---KGPDGIRE-AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
+ F T + G +G E +++ D M++ + P + Y + C +
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACAR------GGL 226
Query: 278 FWEVMLG-----RKTTLQPTTSMYNSMLA--------------------------LYFYH 306
WE +LG R +QP YN++L+ L Y
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 307 NDLETARKM---------MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKN 357
+ +ET K+ + +M G+ PD +YN++ K +++A VF +M
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 358 ECVPDQPNCDAAIRI------YLDNRDAFMAMK 384
C P+ + + Y D R F+ MK
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 45/293 (15%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+ ++ K+ DAM++ + M+ +L TF ++ AG A + ++
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE---IRPDGDTYAILMEGWEREGN 198
+ D V N L+SA G A+D L ++K E I PD + LM+ G
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 199 AVGAKETFAEMVIESGWDPTNEP---AYDS--------FLCTLIK-------GPDGIREA 240
AKE + +M+ + G T E A +S F C++ K PD +
Sbjct: 625 VERAKEVY-QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV--- 680
Query: 241 VKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG---------------- 284
FF ++ D + + + Q K +R+ + ++G
Sbjct: 681 --FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 285 --RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMF 335
+ L+PT S N+++ N L A + +D++ G P+++TY+++
Sbjct: 739 KIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 114/283 (40%), Gaps = 18/283 (6%)
Query: 112 ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDY 171
+++ F + + G DA F+ + VV+ NTL++ C G E +
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 172 LQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL 230
++K RPD TY+ L+ +E GA F EM + G P D TL
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC-KRGLIPN-----DVIFTTL 351
Query: 231 IKGP------DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG 284
I G D ++E+ + M + P + Y + K+ D+ A + M+
Sbjct: 352 IHGHSRNGEIDLMKES---YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 285 RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
R L+P Y +++ + D+ETA ++ +M G D + ++ + + K ++
Sbjct: 409 RG--LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 345 RDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
DA R EM++ PD + + DA K+ K
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 106/257 (41%), Gaps = 6/257 (2%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
++++ +++ L K D + M KR + + F ++ + G +++
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGN 198
M + D+V NTL++ C G + A + + +++ +RPD TY L++G+ R G+
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
A E EM + + + + +C + K I +A + M P
Sbjct: 431 VETALEIRKEM--DQNGIELDRVGFSALVCGMCKEGRVI-DAERALREMLRAGIKPDDVT 487
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
Y ++ K D + + M + P+ YN +L ++ A ++D
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEM--QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 319 MVYRGAFPDSLTYNLMF 335
M+ G PD +TYN +
Sbjct: 546 MLNIGVVPDDITYNTLL 562
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINS-MAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
+++ V+ L + F A+ + ++ + RP L S A Y A + ++ F
Sbjct: 82 AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 141
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK--EIRPDGDTYAILMEGWEREG 197
+E + R V +LN L+ A EA ++ K I PD +TY +++ + G
Sbjct: 142 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 201
Query: 198 NAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
+A + AEM G P N ++ + + D E K M+DR G+
Sbjct: 202 SASSSYSIVAEME-RKGIKP-NSSSF-GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVS 258
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y ++ K + A+ + ML ++P T Y+ ++ + +D E A+K+
Sbjct: 259 TYNIRIQSLCKRKKSKEAKALLDGMLS--AGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
MV RG PDS Y + +L KG A + E ++ VP
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 45/268 (16%)
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILME 191
A+ ME DVV NTL++ +C G+ +A L+D+ K+ I PD T+ L++
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRR 251
+ ++GN A+E + EM I+S DP N Y+S + L + +A K FD M +
Sbjct: 255 VFVKQGNLDEAQELYKEM-IQSSVDPNN-VTYNSIINGLCMHGR-LYDAKKTFDLMASKG 311
Query: 252 CYPGLRFYKAALEQCVK----DHDVRMAE------------------------------- 276
C+P + Y + K D +++ +
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 277 --FFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
F W M+ R+ T P + +L + ++E+A DDM + + YN+M
Sbjct: 372 DIFCW--MVSRRVT--PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 335 FRFLIKGRKLRDASRVFSEMVKNECVPD 362
L K K+ A +F + PD
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPD 455
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 121/318 (38%), Gaps = 41/318 (12%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H YS+ +++ + + M K S+ TF S+ + GDA S
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD---------------------- 174
+M +VV NTL+ +C G+ A + L +
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 175 --------------VKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNE 220
+K+ I PD T+ L++ + ++GN A+E + EM I+S DP N
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNN- 281
Query: 221 PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWE 280
Y+S + L + +A K FD M + C+P + Y + K V ++
Sbjct: 282 VTYNSIINGLCM-HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 281 VMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIK 340
M T YN+++ Y L A + MV R PD +T+ ++ L
Sbjct: 341 RMSCEGFNADIFT--YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 341 GRKLRDASRVFSEMVKNE 358
++ A F +M ++E
Sbjct: 399 NGEIESALVKFDDMRESE 416
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 11/255 (4%)
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGN 198
ME Y D+ + L+ C + A L + K P T+ L+ G+ N
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV-N 155
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
+G + ++++SG++P N Y++ + L K + + A++ + M + +
Sbjct: 156 RIGDAFSLVILMVKSGYEP-NVVVYNTLIDGLCKNGE-LNIALELLNEMEKKGLGADVVT 213
Query: 259 YKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y L C A ++M K ++ P + +++ ++ +L+ A+++
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMM---KRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNR 377
+M+ P+++TYN + L +L DA + F M C P+ + I + R
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 378 DAFMAMKVWK---CE 389
MK+++ CE
Sbjct: 331 MVDEGMKLFQRMSCE 345
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 136/336 (40%), Gaps = 42/336 (12%)
Query: 59 PSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFA 118
P A + F +A + H+ S +++ LG+ F+ + D + ++ F
Sbjct: 64 PLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFT 123
Query: 119 SVFGSYVAAGLPGDAISTF-------------------EVMENYR--------------- 144
+ Y A LP +STF +V+ ++R
Sbjct: 124 YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 145 --CVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVG 201
+ + + N LM A C AY + + +++++ PD D+Y IL++G+ R+G G
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 202 AKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKA 261
A E +M + G+ P + +Y + L +L + +REA K M+ + C P L Y
Sbjct: 244 AMELLDDM-LNKGFVP-DRLSYTTLLNSLCRKTQ-LREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 262 ALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVY 321
+ ++ A + ML + P + Y +++ + +K +++M+
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCS--PNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 322 RGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKN 357
+G P N + + K+ +A V ++KN
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 394
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAY-DSFLCTLIKGPDGIREAV 241
G+ + L++ + TF +M +E + P +P + + L L+ +++A
Sbjct: 119 GEIFTYLIKVYAEAKLPEKVLSTFYKM-LEFNFTP--QPKHLNRILDVLVSHRGYLQKAF 175
Query: 242 KFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLA 301
+ F S R P R Y ++ + D+ +A + ML R P Y ++
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV--PDVDSYKILIQ 233
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
+ + A +++DDM+ +G PD L+Y + L + +LR+A ++ M C P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 362 DQPNCDAAIRIYLDNRDAFMAMKVW 386
D + + I + A A KV
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVL 318
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 38/351 (10%)
Query: 62 AVKFFRWAGHRLLHDHTPY--SWNLVVDVLGKNLLFDAMWDAINSMAK---RPGLISLAT 116
++KF + R +TP+ S+N VV + K D ++SM + P +IS
Sbjct: 40 SLKFLAYLVSR---GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVIS--- 93
Query: 117 FASVFGSYVAAGLPGDAISTFEVMENYR------CVRDVVALNTLMSAVCSGGKTLEAYD 170
+ S+ + GD S V+E+ R C D+V+ N+L + E +
Sbjct: 94 YNSLIDGHCR---NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFV 150
Query: 171 YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTL 230
Y+ + K P+ TY+ ++ + + G A ++F M ++ P +F C L
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA-----LSPNVVTFTC-L 204
Query: 231 IKG---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKT 287
I G + AV + MR R + Y A ++ K +++ AE + M+ +
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV--ED 262
Query: 288 TLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDA 347
++P + +Y +++ +F D + A K + M+ +G D Y ++ L KL++A
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 348 SRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLE 398
+ + +M K++ VPD + I+ +A+ K V Y + +E
Sbjct: 323 TEIVEDMEKSDLVPD-------MVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 19/263 (7%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
+ ++ + G +A+ M N D+ A ++S +C GK EA + ++D+
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 176 KK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG- 233
+K ++ PD + +M + + G A + ++ IE G++P L T+I G
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL-IERGFEPDVVA-----LSTMIDGI 383
Query: 234 -PDG-IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHD-VRMAEFFWEVMLGRKTTLQ 290
+G + EA+ +F + Y ++ K+ D + + F ++ + L
Sbjct: 384 AKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLFSKI---SEAGLV 435
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
P MY S +A +L A K+ MV G D L Y + L + +A +V
Sbjct: 436 PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 351 FSEMVKNECVPDQPNCDAAIRIY 373
F EM+ + PD D IR Y
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRAY 518
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 101/264 (38%), Gaps = 43/264 (16%)
Query: 86 VDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRC 145
+D K+ + +SM + ++ TF + Y AG A+S ++ M R
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 146 VRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKE 204
+VV L+ C G+ A + Y + V+ + P+ Y +++G+ + G++ A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 205 TFAEMVIES-GWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAAL 263
A+M+ + D T S LC G ++EA + + M
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLC----GNGKLKEATEIVEDM---------------- 329
Query: 264 EQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRG 323
K+ L P ++ +M+ YF ++ A M ++ RG
Sbjct: 330 ---------------------EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 324 AFPDSLTYNLMFRFLIKGRKLRDA 347
PD + + M + K +L +A
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEA 392
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 6/223 (2%)
Query: 116 TFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV 175
++ S+ S AG +AI + V D + NT+ SA+ + +D + +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 176 KKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGP 234
KK+ PD TY IL+ + R G A F E+ E + +Y+S + L K
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL--ERSDCKPDIISYNSLINCLGKNG 526
Query: 235 DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTS 294
D + EA F M+++ P + Y +E K V MA +E ML + QP
Sbjct: 527 D-VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC--QPNIV 583
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRF 337
YN +L + A + M +G PDS+TY ++ R
Sbjct: 584 TYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
Query: 154 TLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
+++ ++C GKT+EA + L + +K + D Y + + + F +M
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM--- 468
Query: 213 SGWDPTNEPAYDSFLCTLIKGPDG----IREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
+ P+ D F ++ G + EA+ F+ + C P + Y + + K
Sbjct: 469 ----KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
+ DV A ++ M ++ L P Y++++ + +E A + ++M+ +G P+
Sbjct: 525 NGDVDEAHVRFKEM--QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+TYN++ L K + +A ++S+M + PD
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+N V LGK + D M K + T+ + S+ G +AI+ FE +E
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAV 200
C D+++ N+L++ + G EA+ ++++ K + PD TY+ LME + +
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 201 GAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYP 254
A F EM+++ G P N Y+ L L K EAV + M+ + P
Sbjct: 565 MAYSLFEEMLVK-GCQP-NIVTYNILLDCLEKN-GRTAEAVDLYSKMKQQGLTP 615
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 125/318 (39%), Gaps = 22/318 (6%)
Query: 66 FRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYV 125
R GH+L +++N+++D L K+ + M KR T+ + +
Sbjct: 229 IRRGGHKL----DIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMG 281
Query: 126 AAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGG---KTLEAYDYLQDVKKEIRPD 182
G +A+ F M +VV NTLM + G K ++ + + V+ RP+
Sbjct: 282 RIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM--VETGCRPN 339
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVK 242
TY++L+ EG V + V+E + Y S+L + + EA +
Sbjct: 340 EYTYSLLLNLLVAEGQLVRL-----DGVVEISKRYMTQGIY-SYLVRTLSKLGHVSEAHR 393
Query: 243 FFDSMRDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLA 301
F M Y + LE C + E ++ + + T MYN++ +
Sbjct: 394 LFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI---HEKGVVTDTMMYNTVFS 450
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
+ + + M G PD TYN++ + ++ +A +F E+ +++C P
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 362 DQPNCDAAIRIYLDNRDA 379
D + ++ I N D
Sbjct: 511 DIISYNSLINCLGKNGDV 528
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 49/289 (16%)
Query: 114 LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQ 173
+ T V G +A+ E +E+ DVVA NTL+ C+ GK A +
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 174 DV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIES-GWDPTNEPAYDSFLCTLI 231
++ +K P+ +TY +L+ G+ G A +TF +M ++ W+ + +F TLI
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWN------FATF-NTLI 395
Query: 232 KGPD-GIR--EAVKFFDSMRDRRCYPGLR----------FYKAALEQCVKDHDVRMAEFF 278
+G G R + +K + M+D G R FYK + + ++M + F
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 279 -------------------------WEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETAR 313
++ M+G P+ + + ++ Y H +E +
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV--PSIIVSHCLIHRYSQHGKIEESL 513
Query: 314 KMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
++++DMV RG P S T+N + K K+ + + +M + CVPD
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPD 562
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 113/286 (39%), Gaps = 49/286 (17%)
Query: 77 HTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAIST 136
H YS+ ++D + + M K S+ TF S+ + +A+S
Sbjct: 112 HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSL 171
Query: 137 FEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWER 195
+ + +VV NT++ ++C G+ A D L+ +KK IRPD TY L+
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Query: 196 EGNAVGAKETFAEMVIESGWDP---TNEPAYDSFLCTLIKGPDG-IREAVKFFDSMRDRR 251
G + ++M + G P T D + G +G + EA K ++ M R
Sbjct: 232 SGTWGVSARILSDM-MRMGISPDVITFSALIDVY------GKEGQLLEAKKQYNEMIQR- 283
Query: 252 CYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLET 311
++ P YNS++ H L+
Sbjct: 284 ------------------------------------SVNPNIVTYNSLINGLCIHGLLDE 307
Query: 312 ARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKN 357
A+K+++ +V +G FP+++TYN + K +++ D ++ M ++
Sbjct: 308 AKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 115/296 (38%), Gaps = 41/296 (13%)
Query: 112 ISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTL---------------- 155
+S + ++ + AG A + M C D+V N L
Sbjct: 218 LSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 156 MSAVCSGGKTLEAYDYLQDVK----------------KEIRPDG----DTYAILMEGWER 195
M+ + G L+AY Y Q +K KE+ P G +Y+ L+E + R
Sbjct: 278 MAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCR 337
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
N A F EM + G N Y S + ++ + A K D M + P
Sbjct: 338 ASNTRKAYRLFEEMR-QKGM-VMNVVTYTSLIKAFLREGNS-SVAKKLLDQMTELGLSPD 394
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
FY L+ K +V A + M+ + T P YNS+++ + A K+
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT--PDAISYNSLISGLCRSGRVTEAIKL 452
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIR 371
+DM + PD LT+ + LI+G+KL A +V+ +M+ D+ D I+
Sbjct: 453 FEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 100/262 (38%), Gaps = 22/262 (8%)
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKT-LEAYDYLQDVKKEIRPDGDTYAILMEGWEREGN 198
ME + D+ A N + +C K + V++ PD +Y IL+ G R G
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 199 AVGAKETFAEMVIESGWDPTNE--PAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
A E + M I SG P N+ A LC K D E V + ++ R
Sbjct: 165 VTDAVEIWNAM-IRSGVSPDNKACAALVVGLCHARK-VDLAYEMVA--EEIKSARVKLST 220
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y A + K + AE M K +P YN +L Y+ +N L+ A +M
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYM--SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 317 DDMVYRGAFPDSLTYNLMFR-------------FLIKGRKLRDASRVFSEMVKNECVPDQ 363
+MV G D+ +YN + + F++K + R V S E
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRA 338
Query: 364 PNCDAAIRIYLDNRDAFMAMKV 385
N A R++ + R M M V
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNV 360
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
WN + D + A++D I M +P ++ T+ ++ A+ F M
Sbjct: 166 WNRIEDAI-------ALFDQILGMGFKPNVV---TYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAV 200
+VV N L++ +C G+ +A L+D+ K+ I P+ T+ L++ + + G +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 201 GAKETFAEMVIESGW-DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
AKE + M+ S + D + + LC + EA + F M CYP Y
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMY----GLLDEARQMFYLMERNGCYPNEVIY 331
Query: 260 KAALEQCVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
+ K V + F+E + +K + T + Y ++ Y + A+++ +
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYE--MSQKGVVANTIT-YTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
M R A PD TYN++ L K+ A +F M K E
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 12/276 (4%)
Query: 92 NLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
NL F+ D M L S+ F + IS FE M+ +
Sbjct: 61 NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEG---WEREGNAVGAKETFA 207
N +M VC + A +L + K PD T+ L+ G W R +A+
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA----LF 176
Query: 208 EMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV 267
+ ++ G+ P N Y + + L K + AV+ F+ M P + Y A +
Sbjct: 177 DQILGMGFKP-NVVTYTTLIRCLCKNRH-LNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 268 KDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPD 327
+ A + M+ R+ ++P + +++ + L A+++ + M+ +PD
Sbjct: 235 EIGRWGDAAWLLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 328 SLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
TY + L L +A ++F M +N C P++
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 121/302 (40%), Gaps = 41/302 (13%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
++ ++D L K D + M++ +L T++S+ Y A M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGW------- 193
C +VV ++ +C GKT EAY +Q ++ K +P+ TY +++G+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 194 ------EREGN---------------------AVGAKETFAEMVIESGWDPTNEPAYDSF 226
ER G+ A+ E + ++ W PT+ Y
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW-PTHTAGYRK- 854
Query: 227 LCTLIKGPDG-IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGR 285
+I+G + E++ D + P L Y+ ++ +K + MA E +
Sbjct: 855 ---VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATF 911
Query: 286 KTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLR 345
TL +S YNS++ N +ETA ++ +M +G P+ ++ + + L + K+
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKIS 971
Query: 346 DA 347
+A
Sbjct: 972 EA 973
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 53/319 (16%)
Query: 94 LFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALN 153
L D A + M +++ +S +AG A S M + D +
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 154 TLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
+++ +C+ K A+ +++K+ + D TY I+++ + + G A++ F EM E
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR-E 546
Query: 213 SGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
G P N Y + + +K + A + F++M C P + Y A ++ K V
Sbjct: 547 VGCTP-NVVTYTALIHAYLKAKK-VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 273 RMAEFFWEVMLGRK--------------TTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
A +E M G K + +P Y ++L + + +E ARK++D
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDA------------------------------- 347
M G P+ + Y+ + L K KL +A
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 348 ----SRVFSEMVKNECVPD 362
S+V S+M++N C P+
Sbjct: 725 QDLASKVLSKMLENSCAPN 743
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 123/326 (37%), Gaps = 55/326 (16%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y++ ++VD K L + N M + ++ T+ ++ +Y+ A A FE
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV--KKEI---------------RPD 182
M + C+ ++V + L+ C G+ +A + + K++ RP+
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK--GPDGIRE- 239
TY L++G+ + A++ M +E G +P N+ YD+ + L K D +E
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSME-GCEP-NQIVYDALIDGLCKVGKLDEAQEV 696
Query: 240 -------------------------------AVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
A K M + C P + Y ++ K
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
A ++M + QP Y +M+ + +ET ++++ M +G P+
Sbjct: 757 VGKTDEAYKLMQMM--EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEM 354
+TY ++ K L A + EM
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 14/277 (5%)
Query: 94 LFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALN 153
LF+ D +N M L ++ T++++ + G +M C N
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 154 TLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWEREGNAVG------AKETF 206
+L+ A C+ G AY L+ VK P Y IL+ + +++ A++ +
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 207 AEMVIESG-WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ 265
+EM+ + N ++ LC+ K +A M + P Y L
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGK----YEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 266 CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF 325
+ +A +E M ++ L Y M+ + +E ARK ++M G
Sbjct: 493 LCNASKMELAFLLFEEM--KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550
Query: 326 PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
P+ +TY + +K +K+ A+ +F M+ C+P+
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 111/254 (43%), Gaps = 19/254 (7%)
Query: 117 FASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGG----KTLEAYDYL 172
F+++ +Y +GL +AIS F M+ Y ++V N ++ A GG + + +D +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 173 QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMV---IESGWDPTNEPAYDSFLCT 229
Q + ++PD T+ L+ R G A+ F EM IE + +Y++ L
Sbjct: 331 Q--RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ-----DVFSYNTLLDA 383
Query: 230 LIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVMLGRKTT 288
+ KG + A + M +R P + Y ++ K A F E+ R
Sbjct: 384 ICKGGQ-MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM---RYLG 439
Query: 289 LQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDAS 348
+ YN++L++Y E A ++ +M G D +TYN + K K +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 349 RVFSEMVKNECVPD 362
+VF+EM + +P+
Sbjct: 500 KVFTEMKREHVLPN 513
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 175 VKKEIRPD--GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
VK+E R + G + ++ R G AK F E G+ T A+ + +
Sbjct: 223 VKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF-ETAFAGGYGNTVY-AFSALISAY-- 278
Query: 233 GPDGIRE-AVKFFDSMRDRRCYPGLRFYKAALEQCVKD--HDVRMAEFFWEVMLGRKTTL 289
G G+ E A+ F+SM++ P L Y A ++ C K ++A+FF E+ ++ +
Sbjct: 279 GRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM---QRNGV 335
Query: 290 QPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASR 349
QP +NS+LA+ E AR + D+M R D +YN + + KG ++ A
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE 395
Query: 350 VFSEMVKNECVPD 362
+ ++M +P+
Sbjct: 396 ILAQMPVKRIMPN 408
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 42/289 (14%)
Query: 81 SWNLVVDVLGKN-LLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
++N V+D GK + F + + M + TF S+ GL A + F+
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGN 198
M N R +DV + NTL+ A+C GG+ A++ L + K I P+ +Y+ +++G+ + G
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 199 AVGAKETFAEMVI-----------------------ESGWDPTNEPA----------YDS 225
A F EM E D E A Y++
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 226 FLCTLIKGPDGIREAV-KFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMA-EFFWEVML 283
L G G + V K F M+ P L Y ++ K + A E F E
Sbjct: 485 LLGGY--GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-- 540
Query: 284 GRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
+ L+ +Y++++ + + +A ++D+M G P+ +TYN
Sbjct: 541 -KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 169/443 (38%), Gaps = 46/443 (10%)
Query: 41 IRVTQNDVEDVLKLSYDI---PSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG------- 90
I+++ N V VLK S +I P A FF W+ + + H + +VDVL
Sbjct: 112 IKLSPNFVSFVLK-SDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDR 170
Query: 91 --------KNLLFDAMWDAINSMAKRPGLI--------------------SLATFASVFG 122
K F A N++ K G + +L T+ +
Sbjct: 171 IRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN 230
Query: 123 SYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRP 181
V+A A FEVME+ R D+V NT++ C G+T +A + L+D++ +
Sbjct: 231 GLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA 290
Query: 182 DGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAV 241
D TY +++ + + + EM + P + A+ + L K + E
Sbjct: 291 DKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH--AFSLVIGGLCK-EGKLNEGY 347
Query: 242 KFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLA 301
F++M + P + Y ++ K V A M+ +P Y+ ++
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE--GFKPDVVTYSVVVN 405
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
+ +E A + G +S+ Y+ + L K ++ +A R+F EM + C
Sbjct: 406 GLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 362 DQPNCDAAIRIYLDNRDAFMAMKVWK-CEVEHYRRDLEDTANXXXXXXXXXXXXPEAVKY 420
D +A I + +R A+ ++K E E T EA+K
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 421 AEDMIGRGIKLTSSTLSKLKHRL 443
+ MI +GI T++ L L
Sbjct: 526 WDMMIDKGITPTAACFRALSTGL 548
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 9/236 (3%)
Query: 131 GDAISTFEV---MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTY 186
G+ + EV M D V N ++ +CS G + AY ++ D VK+ + PD TY
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 187 AILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDS 246
L+ +EG A + M ++G ++ +Y + L D + A +F S
Sbjct: 339 NTLISALCKEGKFDEACDLHGTM--QNGGVAPDQISYKVIIQGLCIHGD-VNRANEFLLS 395
Query: 247 MRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYH 306
M P + + ++ + D A +ML ++P N+++ Y
Sbjct: 396 MLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG--VKPNVYTNNALIHGYVKG 453
Query: 307 NDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
L A + ++M PD+ TYNL+ LR A +++ EM++ C PD
Sbjct: 454 GRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
D+V LM + G ++A + +++ +K + D Y +++ G GN V A
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
+MV + G +P + Y++ + L K EA +M++ P YK ++
Sbjct: 324 CDMV-KRGVNP-DVFTYNTLISALCK-EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
DV A F M K++L P ++N ++ Y + D +A +++ M+ G P
Sbjct: 381 CIHGDVNRANEFLLSM--LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ T N + +KG +L DA V +EM + PD
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 9/293 (3%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF-EV 139
++N ++ KNL+ + + + M + ++ ++ Y G G+A E
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHED 144
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNA 199
+ V + N L+ A+C G T A + + +K ++P+ TY IL+ G +
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKS-RR 203
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
VG+ + + +SG+ P N Y + L K I + ++ F M+ + Y F
Sbjct: 204 VGSVDWMMRELKKSGYTP-NAVTYTTMLKMYFK-TKRIEKGLQLFLKMK-KEGYTFDGFA 260
Query: 260 KAALEQCVKDHDVRMAEFFWEVM--LGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
A+ + AE +E M L R T YN++L LYF +L+ +++
Sbjct: 261 NCAVVSALI--KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAI 370
++ +G PD T+ ++ L+ A + + + + P C+ I
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLI 371
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 15/290 (5%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++ M P +IS + ++ SY G +A + F M++ + ++
Sbjct: 172 LSKMGSTPNVIS---YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVE 228
Query: 162 GGKTLEA---YDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP 217
G K EA ++ L D KK ++PD Y +++ +++ GN A++ F+ MV + P
Sbjct: 229 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG--VP 286
Query: 218 TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
+ Y+S L+ +E K +D M+ P + Y ++ + A
Sbjct: 287 QSTVTYNS----LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 342
Query: 278 FWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRF 337
+E ML ++PT YN +L + +E A+ + M FPD +Y M
Sbjct: 343 VFEEML--DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
Query: 338 LIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ + A + F + + P+ I+ Y D M+V++
Sbjct: 401 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 186 YAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFD 245
+ +L+ + + GN GA+ + V+ N +Y + + + +G A F
Sbjct: 149 FLMLITAYGKLGNFNGAERVLS--VLSKMGSTPNVISYTALMESYGRGGK-CNNAEAIFR 205
Query: 246 SMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG-RKTTLQPTTSMYNSMLALYF 304
M+ P Y+ L+ V+ + AE +E +L +K+ L+P MY+ M+ +Y
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265
Query: 305 YHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQP 364
+ E ARK+ MV +G ++TYN + F ++ S+++ +M +++ PD
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSDIQPDVV 322
Query: 365 NCDAAIRIYLDNRDAFMAMKVWK 387
+ I+ Y R A+ V++
Sbjct: 323 SYALLIKAYGRARREEEALSVFE 345
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 118/290 (40%), Gaps = 15/290 (5%)
Query: 102 INSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCS 161
++ M P +IS + ++ SY G +A + F M++ + ++
Sbjct: 165 LSKMGSTPNVIS---YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVE 221
Query: 162 GGKTLEA---YDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP 217
G K EA ++ L D KK ++PD Y +++ +++ GN A++ F+ MV + P
Sbjct: 222 GDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG--VP 279
Query: 218 TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEF 277
+ Y+S L+ +E K +D M+ P + Y ++ + A
Sbjct: 280 QSTVTYNS----LMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 335
Query: 278 FWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRF 337
+E ML ++PT YN +L + +E A+ + M FPD +Y M
Sbjct: 336 VFEEML--DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 338 LIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVWK 387
+ + A + F + + P+ I+ Y D M+V++
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 186 YAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFD 245
+ +L+ + + GN GA+ + V+ N +Y + + + +G A F
Sbjct: 142 FLMLITAYGKLGNFNGAERVLS--VLSKMGSTPNVISYTALMESYGRGGK-CNNAEAIFR 198
Query: 246 SMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG-RKTTLQPTTSMYNSMLALYF 304
M+ P Y+ L+ V+ + AE +E +L +K+ L+P MY+ M+ +Y
Sbjct: 199 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 258
Query: 305 YHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQP 364
+ E ARK+ MV +G ++TYN + F ++ S+++ +M +++ PD
Sbjct: 259 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSDIQPDVV 315
Query: 365 NCDAAIRIYLDNRDAFMAMKVWK 387
+ I+ Y R A+ V++
Sbjct: 316 SYALLIKAYGRARREEEALSVFE 338
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 134/366 (36%), Gaps = 60/366 (16%)
Query: 65 FFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGL--ISLATFASVFG 122
FFRW +D+TP +L N+LF A+ D A + L ++
Sbjct: 99 FFRWLCSN--YDYTPGPVSL-------NILFGALLDGKAVKAAKSFLDTTGFKPEPTLLE 149
Query: 123 SYVAA----GLPGDAISTFEVMENYRCVRDVVALNT------------------------ 154
YV GL +AI + V+++ VV N+
Sbjct: 150 QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES 209
Query: 155 ---------LMSAVCSGGKTLEAYDYL-QDVKKEIRPDGDTYAILMEGWEREGNAVGAKE 204
L+ A+C GG E Y+ L Q +K+ + P YA L+ G+ GN E
Sbjct: 210 EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE 269
Query: 205 TFAEMVIESGWDPTNEPA---YDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKA 261
M+ W+ + P+ Y + L + EA F +++D+ P Y
Sbjct: 270 VLHTMI---AWN--HFPSMYIYQKIIKGLCMNKKQL-EAYCIFKNLKDKGYAPDRVVYTT 323
Query: 262 ALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVY 321
+ + + A W M+ K ++P YN M+ +F ++ ++M+
Sbjct: 324 MIRGFCEKGWLGSARKLWFEMI--KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR 381
Query: 322 RGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFM 381
G L+ N M + K +A +F M + P+ +A I+ +
Sbjct: 382 NGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEK 441
Query: 382 AMKVWK 387
+K++K
Sbjct: 442 GLKLYK 447
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 111/274 (40%), Gaps = 41/274 (14%)
Query: 114 LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQ 173
+ T +S+ + + DA+ ME RDVV L+ +C + A + L+
Sbjct: 13 IVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLK 72
Query: 174 DVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
+K + I P+ TY+ L+ G + G A+ EM
Sbjct: 73 RMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM----------------------- 109
Query: 233 GPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPT 292
DS ++ P + + A ++ K + + +++M+ + ++ P
Sbjct: 110 ------------DS---KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI--QMSIDPN 152
Query: 293 TSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFS 352
Y+S++ HN ++ A KM+D M+ +G P+ +TY+ + K ++ D ++
Sbjct: 153 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 212
Query: 353 EMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVW 386
+M + + +C+ I+ Y +A+ V+
Sbjct: 213 DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILME 191
A+ + M++ +VV ++L++ +C G+ +A L ++ K+I P+ T++ L++
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRR 251
+ + G + ++ +M+I+ DP N Y S + L + + EA+K D M +
Sbjct: 127 AYAKRGK-LSKVDSVYKMMIQMSIDP-NVFTYSSLIYGLCM-HNRVDEAIKMLDLMISKG 183
Query: 252 CYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLET 311
C P Y+++ +F + ++
Sbjct: 184 C-------------------------------------TPNVVTYSTLANGFFKSSRVDD 206
Query: 312 ARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
K++DDM RG ++++ N + + + K+ A VF M N +P+
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 257
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 119/293 (40%), Gaps = 19/293 (6%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y+ L V L K+ F + I S P + + +++ SY A + A+ FE
Sbjct: 68 YAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEE 127
Query: 140 MENYRCVRDVVALNTLMSAVCSGG---KTLEAYDYLQDVKKEIRPDGDTYAILMEGWERE 196
M+ R VV+ N L++A + + +D I PD +Y +L++ +
Sbjct: 128 MDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDS 187
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGL 256
G A E +M ++ G + T A+ + L +L K + EA + M ++ C
Sbjct: 188 GKPEKAMEIMRDMEVK-GVEVTI-IAFTTILGSLYKN-GLVDEAESLWIEMVNKGCDLDN 244
Query: 257 RFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMM 316
Y L K+ R+ E E+ L+P T YN ++ Y + A+K
Sbjct: 245 TVYNVRLMNAAKESPERVKELMEEM---SSVGLKPDTVSYNYLMTAYCVKGMMSEAKK-- 299
Query: 317 DDMVYRG-AFPDSLTY-NLMFRFLIKGRKLRDAS-RVFSEMVKNECVPDQPNC 366
VY G P++ T+ L+F I G L D VF + +PD C
Sbjct: 300 ---VYEGLEQPNAATFRTLIFHLCING--LYDQGLTVFKKSAIVHKIPDFKTC 347
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
Query: 124 YVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPD 182
Y+ G+ D++ F +M Y V N ++ +V G+ + + +L++ +K++I PD
Sbjct: 173 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 232
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVK 242
T+ IL+ EG+ + +M +SG+ PT Y++ L K + A++
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKME-KSGYAPT-IVTYNTVLHWYCK-KGRFKAAIE 289
Query: 243 FFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLAL 302
D M+ + + Y + + + R+A+ + + RK + P YN+++
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSN--RIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 303 YFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ + A +++++M+ G P+ +T+N + I ++A ++F M P
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 363 Q 363
+
Sbjct: 408 E 408
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 134/352 (38%), Gaps = 26/352 (7%)
Query: 17 TQTLFEIIS--TTPSVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLL 74
+Q L E++S +P+ AL D +++ + ++ LK+ Y + + +
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDG--HISEGNFKEALKMFYMMEAKGL----------- 404
Query: 75 HDHTP--YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGD 132
TP S+ +++D L KN FD M + + T+ + G +
Sbjct: 405 ---TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILME 191
A+ M D+V + L++ C G+ A + + + + + P+G Y+ L+
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRR 251
R G A + M++E + ++ + +L K + EA +F M
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEG--HTRDHFTFNVLVTSLCKAGK-VAEAEEFMRCMTSDG 578
Query: 252 CYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLET 311
P + + + A ++ M K PT Y S+L L
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEM--TKVGHHPTFFTYGSLLKGLCKGGHLRE 636
Query: 312 ARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
A K + + A D++ YN + + K L A +F EMV+ +PD
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 15/326 (4%)
Query: 42 RVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLF---DAM 98
RVT + V +VLKL D + A KFF WAG + + H ++N L +N F D +
Sbjct: 122 RVTPSIVAEVLKLGND-AAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 99 WDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSA 158
+ ++S + P S F + + +E M+ + V N +M A
Sbjct: 181 PELMDSQGRPP---SEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDA 237
Query: 159 VCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDP 217
+ G A +D K++ + + T+ IL++G + G E M E+ P
Sbjct: 238 LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR-ENLCKP 296
Query: 218 TNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV-RMAE 276
+ AY + + TL+ + +++ +D MR P + Y + KD V R E
Sbjct: 297 -DVFAYTAMIKTLV-SEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYE 354
Query: 277 FFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFR 336
F E M G++ + +Y ++ + + +A + +D+V G D YN + +
Sbjct: 355 LFME-MKGKQILID--REIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIK 411
Query: 337 FLIKGRKLRDASRVFSEMVKNECVPD 362
L ++ A ++F ++ E PD
Sbjct: 412 GLCSVNQVDKAYKLFQVAIEEELEPD 437
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 96 DAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTL 155
D + ++ K SL T + G+ G DA S F M+ DVV N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 156 MSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESG 214
M + + ++ + +++ I PD TY IL+ G A E +E+ I G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL-IRRG 543
Query: 215 WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRM 274
+ P+ A+ + K D +EA + M D R P + A L K +
Sbjct: 544 FVPST-LAFTDVIGGFSKRGD-FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
A + +L L+P +YN+++ Y D+E A +++ MV RG P+ T++ +
Sbjct: 602 AIVLFNKLL--DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 19/273 (6%)
Query: 95 FDAMWDAINSMAK---RPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
FD W+ + M RP +++ F AG +A S ++ + +D V+
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFID---KLCKAGFLKEATSVLFKLKLFGISQDSVS 343
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVI 211
+++++ C GK EA + + +RP+ Y+ + G+ + A F E +
Sbjct: 344 VSSVIDGFCKVGKPEEAIKLIHSFR--LRPNIFVYSSFLSNICSTGDMLRASTIFQE-IF 400
Query: 212 ESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
E G P + Y + + C L + +A ++F ++ P L + C +
Sbjct: 401 ELGLLP-DCVCYTTMIDGYCNLGRTD----KAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
+ AE + M L T YN+++ Y + L +++D+M G PD
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVT--YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
TYN++ ++ + +A+ + SE+++ VP
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 124 YVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPD 182
+ G P +AI +++ ++R ++ ++ +S +CS G L A Q++ + + PD
Sbjct: 351 FCKVGKPEEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVK 242
Y +++G+ G A + F + ++SG P+ + + L I +A
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTS--TILIGACSRFGSISDAES 464
Query: 243 FFDSMRDRRCYPGLRFYKAALEQCVKDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLA 301
F +M+ + Y + K H + ++ E E+ R + P + YN ++
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM---RSAGISPDVATYNILIH 521
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
++ A +++ +++ RG P +L + + K ++A ++ M P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 362 DQPNCDAAIRIY 373
D C A + Y
Sbjct: 582 DVVTCSALLHGY 593
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 6/240 (2%)
Query: 96 DAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTL 155
D + ++ K SL T + G+ G DA S F M+ DVV N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 156 MSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESG 214
M + + ++ + +++ I PD TY IL+ G A E +E+ I G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL-IRRG 543
Query: 215 WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRM 274
+ P+ A+ + K D +EA + M D R P + A L K +
Sbjct: 544 FVPST-LAFTDVIGGFSKRGD-FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
A + +L L+P +YN+++ Y D+E A +++ MV RG P+ T++ +
Sbjct: 602 AIVLFNKLL--DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHAL 659
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 19/273 (6%)
Query: 95 FDAMWDAINSMAK---RPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVA 151
FD W+ + M RP +++ F AG +A S ++ + +D V+
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFID---KLCKAGFLKEATSVLFKLKLFGISQDSVS 343
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVI 211
+++++ C GK EA + + +RP+ Y+ + G+ + A F E +
Sbjct: 344 VSSVIDGFCKVGKPEEAIKLIHSFR--LRPNIFVYSSFLSNICSTGDMLRASTIFQE-IF 400
Query: 212 ESGWDPTNEPAYDSFL---CTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
E G P + Y + + C L + +A ++F ++ P L + C +
Sbjct: 401 ELGLLP-DCVCYTTMIDGYCNLGRTD----KAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 269 DHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDS 328
+ AE + M L T YN+++ Y + L +++D+M G PD
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVT--YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 329 LTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
TYN++ ++ + +A+ + SE+++ VP
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 124 YVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPD 182
+ G P +AI +++ ++R ++ ++ +S +CS G L A Q++ + + PD
Sbjct: 351 FCKVGKPEEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVK 242
Y +++G+ G A + F + ++SG P+ + + L I +A
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTS--TILIGACSRFGSISDAES 464
Query: 243 FFDSMRDRRCYPGLRFYKAALEQCVKDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLA 301
F +M+ + Y + K H + ++ E E+ R + P + YN ++
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM---RSAGISPDVATYNILIH 521
Query: 302 LYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
++ A +++ +++ RG P +L + + K ++A ++ M P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 362 DQPNCDAAIRIY 373
D C A + Y
Sbjct: 582 DVVTCSALLHGY 593
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 4/145 (2%)
Query: 50 DVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRP 109
L LS + A+ F W HT + + VD G+ F M + I +K
Sbjct: 114 QTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEII---SKYK 170
Query: 110 GLISLATFASVFGSYVAAGLPGDAISTFEVMEN-YRCVRDVVALNTLMSAVCSGGKTLEA 168
G+ T S V AG P FE MEN Y RD +L ++ +C G A
Sbjct: 171 GIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIA 230
Query: 169 YDYLQDVKKEIRPDGDTYAILMEGW 193
+++ EI PD + +L+ GW
Sbjct: 231 EKMVKNTANEIFPDENICDLLISGW 255
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 12/290 (4%)
Query: 78 TPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTF 137
+ Y++ L+++ L K L + + M ++ G + P + ++
Sbjct: 376 SEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVL 435
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV--KKEIRPDGDTYAILMEGWER 195
M C D LNT+++ +C G+ +A L D+ K PD T +M G
Sbjct: 436 VSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLA 495
Query: 196 EGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPG 255
+G A A + ++ E+ P AY++ + L K G EA+ F +
Sbjct: 496 QGRAEEALDVLNRVMPENKIKP-GVVAYNAVIRGLFKLHKG-DEAMSVFGQLEKASVTAD 553
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVML---GRKTTLQPTTSMYNSMLALYFYHNDLETA 312
Y ++ + V MA+ FW+ ++ GR +Y + L L A
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAF-----VYAAFLKGLCQSGYLSDA 608
Query: 313 RKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ D+ GA P+ + YN + + R+A ++ EM KN PD
Sbjct: 609 CHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPD 658
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 15/263 (5%)
Query: 119 SVFGSYVAA-----GLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YL 172
+V+ +Y+ G +AI F+ M+ RC N +++ K+ ++ Y
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 173 QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
+ + +P+ TY L+ + REG A+E F E + E G +P + Y++ + + +
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF-EQLQEDGLEP-DVYVYNALMESYSR 346
Query: 233 G--PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ 290
P G A + F M+ C P Y ++ + AE +E M ++ +
Sbjct: 347 AGYPYG---AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM--KRLGIA 401
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
PT + +L+ Y D+ ++ +M G PD+ N M + + ++
Sbjct: 402 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 461
Query: 351 FSEMVKNECVPDQPNCDAAIRIY 373
+EM C D + I IY
Sbjct: 462 LAEMENGPCTADISTYNILINIY 484
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 6/229 (2%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
DV+ N L+ A + EA Y+Q ++ P DTYA+L++ + G A+
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 207 AEMVIESGWDPT-NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ 265
EM T Y++++ L+K EA+ F M+ RC P Y +
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 266 CVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
K M+ + + E+ R +P Y +++ + E A ++ + + G
Sbjct: 274 YGKASKSYMSWKLYCEM---RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 325 FPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
PD YN + + A+ +FS M C PD+ + + + Y
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 8/225 (3%)
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
M +++C ++ L++A G +A + + ++++ + PD Y LME + R G
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIR-EAVKFFDSMRDRRCYPGLR 257
GA E F+ M G +P + +Y+ + G G+ +A F+ M+ P ++
Sbjct: 350 PYGAAEIFSLMQ-HMGCEP-DRASYNIMVDAY--GRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
+ L K DV E + M + ++P T + NSML LY K++
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+M D TYN++ K L +F E+ + PD
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 78 TPYSWNLVVDVLGKNLLFD---AMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAI 134
TP+S N+++D+L K AM IN + P S+ T+ ++ + +G +
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP---SVVTYTTLVDGLIRSGDITGSF 601
Query: 135 STFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGW 193
E+M+ C+ +V +++ +C G+ EA L ++ + P+ TY ++++G+
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661
Query: 194 EREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGI 237
G A ET MV E G++ N+ Y S L + GI
Sbjct: 662 VNNGKLDRALETVRAMV-ERGYE-LNDRIYSSLLQGFVLSQKGI 703
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 128/316 (40%), Gaps = 14/316 (4%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++N +++ K+ ++ + M KR ++ TF + G P A+ + M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNA 199
+ D+V+ N L+ +C G AY L + +I PD T+ ++ + ++G A
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 200 VGAKETFAEMVIESG--WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
F +++ G D +C + K R+A+ +++ R
Sbjct: 493 -DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK----TRDALFILETLVKMRILTTPH 547
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGR--KTTLQPTTSMYNSMLALYFYHNDLETARKM 315
L+ K V+ E MLG+ K L P+ Y +++ D+ + ++
Sbjct: 548 SLNVILDMLSKGCKVK-EEL---AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLD 375
++ M G P+ Y ++ L + ++ +A ++ S M + P+ ++ Y++
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 376 NRDAFMAMKVWKCEVE 391
N A++ + VE
Sbjct: 664 NGKLDRALETVRAMVE 679
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 114/280 (40%), Gaps = 7/280 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSM-AKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
++ +V L K D IN M +K + T+ +V + G A +V
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
M + + V+ L++ +C GK+LEA + + ++ P+ TY+++M G REG
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRF 258
A + EMV++ G+ P P + L + EA KF + ++ C +
Sbjct: 540 LSEACDVVREMVLK-GFFPG--PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 259 YKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDD 318
+ + ++ ++ A + M Y +++ + A ++M
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMY--LINKHADVFTYTTLVDTLGKKGRIAEATELMKK 654
Query: 319 MVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE 358
M+++G P +TY + + K+ D + +M+ +
Sbjct: 655 MLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 15/263 (5%)
Query: 119 SVFGSYVAA-----GLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YL 172
+V+ +Y+ G +AI F+ M+ RC N +++ K+ ++ Y
Sbjct: 251 TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 173 QDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
+ + +P+ TY L+ + REG A+E F E + E G +P + Y++ + + +
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF-EQLQEDGLEP-DVYVYNALMESYSR 368
Query: 233 G--PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQ 290
P G A + F M+ C P Y ++ + AE +E M ++ +
Sbjct: 369 AGYPYG---AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM--KRLGIA 423
Query: 291 PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
PT + +L+ Y D+ ++ +M G PD+ N M + + ++
Sbjct: 424 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 483
Query: 351 FSEMVKNECVPDQPNCDAAIRIY 373
+EM C D + I IY
Sbjct: 484 LAEMENGPCTADISTYNILINIY 506
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 6/229 (2%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETF 206
DV+ N L+ A + EA Y+Q ++ P DTYA+L++ + G A+
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 207 AEMVIESGWDPT-NEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ 265
EM T Y++++ L+K EA+ F M+ RC P Y +
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 266 CVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
K M+ + + E+ R +P Y +++ + E A ++ + + G
Sbjct: 296 YGKASKSYMSWKLYCEM---RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 325 FPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
PD YN + + A+ +FS M C PD+ + + + Y
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 8/225 (3%)
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
M +++C ++ L++A G +A + + ++++ + PD Y LME + R G
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 199 AVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIR-EAVKFFDSMRDRRCYPGLR 257
GA E F+ M G +P + +Y+ + G G+ +A F+ M+ P ++
Sbjct: 372 PYGAAEIFSLMQ-HMGCEP-DRASYNIMVDAY--GRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
+ L K DV E + M + ++P T + NSML LY K++
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEM--SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+M D TYN++ K L +F E+ + PD
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 530
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 16/286 (5%)
Query: 82 WNLVVDVLGKN-LLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
+ ++VD L K L+ AM ++ + + L ++ F S+ + +A+ F +M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-NVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEA-YDYLQDVKKEIRPDGDTYAILMEGWEREGNA 199
Y DV T+M G+ EA + + + K + PD Y L++ + +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCT----LIKGPDGIREAVKFFDSMRDRRCYPG 255
+ F M N+ + D +C L+ I +A KFF+++ + + P
Sbjct: 583 TIGLQLFDLM-------QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 256 LRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKM 315
+ Y + + AE +E++ + T P T ++ + +ND++ A +M
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELL--KVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 316 MDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
M +G+ P+++TY + + K + + ++F EM + P
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 6/268 (2%)
Query: 96 DAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTL 155
D +D M +R L ++++ Y AG+ G F + DVV ++
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362
Query: 156 MSA-VCSGGKTLEAYDYLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESG 214
+ V SG + Y + + + I P+ TY IL++G ++G A + + +++ G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ-ILKRG 421
Query: 215 WDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRM 274
+P+ Y S + K + +R ++ M P + Y ++ K +
Sbjct: 422 MEPS-IVTYSSLIDGFCKCGN-LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 275 AEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLM 334
A F MLG+ L ++NS++ + N + A K+ M G PD T+ +
Sbjct: 480 AMRFSVKMLGQSIRLN--VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 335 FRFLIKGRKLRDASRVFSEMVKNECVPD 362
R I +L +A +F M K PD
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPD 565
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 31 AVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWAGHRLLHDHTPYSWNLVVDVLG 90
+ ++ L G+R + + VLK ++ A FF WA H +++ ++D+ G
Sbjct: 75 SAQEQLPHLGVRWDSHIINRVLK-AHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFG 133
Query: 91 KNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVV 150
+ +M+ + M ++ LI T+ S+ ++G A+ +E M + C VV
Sbjct: 134 EAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVV 193
Query: 151 ALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEGWEREGNAVGAKETFAEM 209
+ M + + G+ EA + Y + ++ + P+ TY +LME G A + F +M
Sbjct: 194 SYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKM 253
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKF 243
E G P D C ++ I +A+KF
Sbjct: 254 Q-EIGVQP------DKAACNIL-----IAKALKF 275
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 8/232 (3%)
Query: 133 AISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILME 191
A+ VM V D + N ++ +C G A L+D+ PD TY ++
Sbjct: 158 AMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR 217
Query: 192 GWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRR 251
GNA A + + +++G P + L L+ G A++ + M
Sbjct: 218 CMFDYGNAEQAIRFWKDQ-LQNGCPPF--MITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 252 CYPGLRFYKAALE-QCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLE 310
CYP + Y + + C + + +A ++ L+ T YN++L H +
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL---SHGLELNTVTYNTLLHSLCSHEYWD 331
Query: 311 TARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
++++ M P +TYN++ L K R L A F +M++ +C+PD
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETF 206
++V NT +S G + + L+ + +PD T+++++ R A + F
Sbjct: 459 NLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCF 518
Query: 207 AEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQC 266
EM +E G +P NE Y+ + + D R +VK F M++ P L Y A ++
Sbjct: 519 KEM-LEWGIEP-NEITYNILIRSCCSTGDTDR-SVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 267 VKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
K V+ AE + ML + L+P Y++++ AR+M + G P
Sbjct: 576 CKMRKVKKAEELLKTML--RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Query: 327 DSLTYNLM 334
DS T L+
Sbjct: 634 DSYTKRLV 641
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 96/216 (44%), Gaps = 8/216 (3%)
Query: 149 VVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFA 207
V + N ++ +C + A +L +++ + I P+ T+ + G+ G+
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 208 EMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCV 267
++++ G+ P + + + L + + I++A F M + P Y + C
Sbjct: 485 KLLVH-GFKP-DVITFSLIINCLCRAKE-IKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 268 KDHDV-RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
D R + F ++ ++ L P YN+ + + ++ A +++ M+ G P
Sbjct: 542 STGDTDRSVKLFAKM---KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
D+ TY+ + + L + + +A +FS + ++ CVPD
Sbjct: 599 DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 109/281 (38%), Gaps = 29/281 (10%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+N+ D LGK + + M + + + ++ G G DA M+
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGW------- 193
D+V N L + + G EA++ L+ ++ + ++P T+ +++EG
Sbjct: 459 GTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELD 518
Query: 194 ------------EREGNAVGAKETFAEMVIESGWD-------PTNEPAYDSFLCTLIKGP 234
RE +A K A ++ ++ P + Y + +L
Sbjct: 519 KAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEK 578
Query: 235 DGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTS 294
D I +A D M P Y + + ++VR A F+E+++ +K P
Sbjct: 579 DYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV--PDLF 636
Query: 295 MYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMF 335
Y M+ Y N+ + A + +DM R PD +TY+++
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 108/270 (40%), Gaps = 27/270 (10%)
Query: 94 LFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALN 153
L D MW + P + + + G++ A FE++ + V D+
Sbjct: 587 LLDRMW----KLGVEP---EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYT 639
Query: 154 TLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIE 212
+++ C + +AY +D+K+ +++PD TY++L+ N+ + EM
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NSDPELDMKREM--- 689
Query: 213 SGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDV 272
+D + Y + + + +++ F M+ R P + Y L+ + +
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLS 749
Query: 273 RMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYN 332
R + F ++P Y ++ DL A+++ D M+ G PD+ Y
Sbjct: 750 REMKAF---------DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 333 LMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ K L++A +F M+++ PD
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKKE--IRPDGDTYAILMEGWEREGNAVGAKET 205
+ N L+ C G A+ ++++K+ P+ TY+ LM+ + A E
Sbjct: 195 NTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVEL 254
Query: 206 FAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ 265
F +M+ + G P +P + + + A K D M+ C P + Y A +
Sbjct: 255 FEDMISKEGISP--DPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 266 CVKDHDVRMA-EFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGA 324
K ++ A + F EV +KT L+ T Y +++ + + + + A K++ +M
Sbjct: 313 FCKVGKIQEAKQTFDEV---KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 325 FPDSLTYNLMFRFL 338
D+LTYN++ R L
Sbjct: 370 RADTLTYNVILRGL 383
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 124/290 (42%), Gaps = 16/290 (5%)
Query: 80 YSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEV 139
Y+++ ++ GK +FD+ + M + L ++++ AIS F
Sbjct: 191 YTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSR 250
Query: 140 MENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGN 198
++ D+VA N++++ EA ++++ + + P+ +Y+ L+ +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 199 AVGAKETFAEMV-IESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
+ A FAEM + D T + + + D ++EA + F S+R P +
Sbjct: 311 FLEALSVFAEMKEVNCALDLTT----CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVV 366
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVM----LGRKTTLQPTTSMYNSMLALYFYHNDLETAR 313
Y L + AE F E + L ++ ++ YN+M+ +Y + E A
Sbjct: 367 SYNTILRVYGE------AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 314 KMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
++ +M RG P+++TY+ + K KL A+ +F ++ + DQ
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 146/341 (42%), Gaps = 15/341 (4%)
Query: 29 SVAVEKALEDSGIRVTQNDVEDVLKLSYDIPSHAVKFFRWA---GHRLLHDHTPYSWNLV 85
S VE+ L++ + ++ N V VLK + P A+ FF W G + H+ ++N
Sbjct: 210 SCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAA 269
Query: 86 VDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRC 145
+ VL + W ++ M + L T+ V + + + + + +E M +
Sbjct: 270 LRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMD-GP 328
Query: 146 VRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIRPDGDTYA-ILMEGWEREGNAVG--- 201
+ + +L+ SG + D + V ++ G + + + +G R +VG
Sbjct: 329 FKPSIQDCSLLLRYLSGSPNPD-LDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFD 387
Query: 202 AKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKA 261
E + + +G++P N Y + L K + EA D M + C+P ++ +
Sbjct: 388 EAEEITKAMRNAGYEPDN-ITYSQLVFGLCKA-KRLEEARGVLDQMEAQGCFPDIKTWTI 445
Query: 262 ALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVY 321
++ K++++ A + ML + + +++ + ++ + HN E A + +MV
Sbjct: 446 LIQGHCKNNELDKALACFANMLEKGFDID--SNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 322 RGAF-PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVP 361
P TY L+ L+K +K +A + +M+K + P
Sbjct: 504 NANVKPWQSTYKLLIDKLLKIKKSEEALDLL-QMMKKQNYP 543
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 109/271 (40%), Gaps = 7/271 (2%)
Query: 105 MAKRPGLIS-LATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGG 163
MA+ GL + AT S+ + +G +A + FE + A N L+ G
Sbjct: 294 MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTG 353
Query: 164 KTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPA 222
+A + +++K + PD TY++L++ + G A+ EM E+G N
Sbjct: 354 PLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM--EAGDVQPNSFV 411
Query: 223 YDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVM 282
+ L + ++ + M+ P +FY ++ K + + A ++ M
Sbjct: 412 FSRLLAGF-RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 283 LGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGR 342
L ++P +N+++ + H A +M + M RG P + TYN+M
Sbjct: 471 LSEG--IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 343 KLRDASRVFSEMVKNECVPDQPNCDAAIRIY 373
+ D R+ +M +P+ + +Y
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVY 559
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 85 VVDVLGKNLLFDAMWDAINSMAKRPGLISLAT-FASVFGSYVAAGLPGDAISTFEVMENY 143
+VDV GK+ F+ + + M K GL +T + ++ +Y GL A++ F VM +
Sbjct: 555 LVDVYGKSGRFNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 144 RCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNAVGA 202
++ALN+L++A + EA+ LQ +K+ ++PD TY LM+ R
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673
Query: 203 KETFAEMVIESGWDP 217
+ EM++ SG P
Sbjct: 674 PVVYEEMIM-SGCKP 687
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 128/280 (45%), Gaps = 24/280 (8%)
Query: 98 MWDAINSMAKRPGL---ISLATFASVFGSYVAAGLPGDAISTFEVM---ENYRCVRDVVA 151
M DA+ ++ K L + +T+ ++ Y AG P + ++M N ++
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAK-ETFAEM 209
N L+ A C K EA++ ++ +++ +RPD TY + + ++G V A+ E +M
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGP---DG-IREAVKFFDSMRDRRCYPGLRFYKAALEQ 265
V++ P + C ++ G +G +R+ ++F M++ R L + + +
Sbjct: 251 VMKEKAKP------NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 266 CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAF 325
V+ D + +M ++ ++ Y++++ + +E A ++ +MV G
Sbjct: 305 FVEVMDRDGIDEVLTLM--KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 326 PDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPN 365
PD+ Y+++ + ++ ++ + A + ++ V +PN
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLI----VESRPN 398
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 99/262 (37%), Gaps = 42/262 (16%)
Query: 104 SMAKRPGLI-SLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSG 162
S K GL ++ T+ ++ + AG G A +M + + ++ N + ++C
Sbjct: 382 SRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 441
Query: 163 GKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEP 221
+ EAY+ L + DG TY IL++ ++ +
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND----------------------- 478
Query: 222 AYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEV 281
I +A+ FF M +R + + ++ +E +++
Sbjct: 479 ---------------INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 282 MLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKG 341
++ L PT Y SM++ Y D++ A K +M G PDS TY + L K
Sbjct: 524 VVS--LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 342 RKLRDASRVFSEMVKNECVPDQ 363
+ +A +++ M+ P +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPE 603
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 139/373 (37%), Gaps = 21/373 (5%)
Query: 67 RWAGHRLLHDHTP--YSWNLVVDVLGKNLLFD-AMW--DAINSMAKRPGLISLATFASVF 121
RW + P + L++ L +N L + A+W + + +P LI+ F S+
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLIN---FTSLI 294
Query: 122 GSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEI- 179
G A E M +V L+ +C G T +A+ +L+ V+ +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 180 RPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDG 236
+P+ TY ++ G+ +E A+ F+ M E G P N Y TLI G
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK-EQGLFP-NVNTYT----TLINGHCKAGS 408
Query: 237 IREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMY 296
A + + M D P + Y AA++ K R E + + L+ Y
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS--RAPEAYELLNKAFSCGLEADGVTY 466
Query: 297 NSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
++ ND+ A M G D N++ + +K++++ R+F +V
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 357 NECVPDQPNCDAAIRIYLDNRDAFMAMKVWKCEVEHYRRDLEDTANXXXXXXXXXXXXPE 416
+P + + I Y D +A+K + H T E
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE 586
Query: 417 AVKYAEDMIGRGI 429
A K E MI RG+
Sbjct: 587 ACKLYEAMIDRGL 599
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 20/263 (7%)
Query: 93 LLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVAL 152
L FD M I+ G ++ + +V YV +G A+ ++ M R DV
Sbjct: 178 LAFDTMKRLID------GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTF 231
Query: 153 NTLMSAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVI 211
N L++ C K A D +++K K P+ ++ L+ G+ G + EM I
Sbjct: 232 NILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEM-I 290
Query: 212 ESGW---DPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQ-CV 267
E G + T E D LC + + +A + ++R P Y + +E+ C
Sbjct: 291 ELGCRFSEATCEILVDG-LCREGR----VDDACGLVLDLLNKRVLPSEFDYGSLVEKLCG 345
Query: 268 KDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPD 327
++ VR E E+ K P +++ E A M+ M+ G PD
Sbjct: 346 ENKAVRAMEMMEELW---KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPD 402
Query: 328 SLTYNLMFRFLIKGRKLRDASRV 350
S+T+NL+ R L DA+R+
Sbjct: 403 SVTFNLLLRDLCSSDHSTDANRL 425
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 128/316 (40%), Gaps = 30/316 (9%)
Query: 66 FRWAG--HRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRP-----GLISLATFA 118
F WA HDH + W + L FD ++ ++ +A P G+ S
Sbjct: 100 FNWAATLDTFRHDHDSFLW--MSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELE 157
Query: 119 SVFGS----YVAAGLPGDAISTFEVMENYRCVRDVVAL-NTLMSAVCSGGKTLEAYDYLQ 173
+F S Y A A+ F+ M+ + V + NT+++ G +A + Q
Sbjct: 158 PIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 174 DVKKE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK 232
+ KE +PD T+ IL+ G+ R A + F EM E G +P N +++ TLI+
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK-EKGCEP-NVVSFN----TLIR 271
Query: 233 G---PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKD--HDVRMAEFFWEVMLGRKT 287
G I E VK M + C RF +A E V + R+ + V+
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGC----RFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 288 TLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDA 347
+ P+ Y S++ N A +MM+++ +G P + + L K + A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 348 SRVFSEMVKNECVPDQ 363
S +M+ +PD
Sbjct: 388 SGFMEKMMNAGILPDS 403
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 157 SAVCSGGKTLEAYDYLQDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEM------ 209
S++ G+ EA + L+++K K I + Y++L+ + V ++ F E
Sbjct: 256 SSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLL 315
Query: 210 -------------VIESGWDPTNE----------PAYDSFLCTLIKG---PDGIREAVKF 243
V E + T E D LC ++ G G EAVK
Sbjct: 316 KDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKV 375
Query: 244 FDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALY 303
++ C G Y A+ + AE ++ M+ K Y++++ +Y
Sbjct: 376 YEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMV--KKGFDKCVVAYSNIMDMY 433
Query: 304 FYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQ 363
L A ++M M RG P+ YN + + LR A +++ EM + + +PD+
Sbjct: 434 GKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDK 493
Query: 364 PNCDAAIRIY 373
+ + I Y
Sbjct: 494 VSYTSMISAY 503
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 105/230 (45%), Gaps = 15/230 (6%)
Query: 138 EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQD-VKKEIRPDGDTYAILMEGWERE 196
++ N C DV+A + L+ A+C +T+EA + V K ++P TY +++GW +E
Sbjct: 604 DICANGHC-PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKE 662
Query: 197 GNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIREAVKFFDSMRDRRCY 253
G M ++ P ++ +LI G EA+ ++ M+ + CY
Sbjct: 663 GEIDRGLSCIVRM-----YEDEKNPDVITYT-SLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Query: 254 PGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETAR 313
P + A ++ K A ++ M + ++P +++Y S+++ + ++
Sbjct: 717 PNRITFMALIQGLCKCGWSGEALVYFREM--EEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 314 KMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRD--ASRVFSEMVKNECVP 361
+ +MV++G FP S+ N M + + + D S + ++K+ +P
Sbjct: 775 GIFREMVHKGRFPVSVDRNYMLAVNVTSKFVEDLRTSCYLTCLIKDGRIP 824
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 144 RCVRDVVALNTLMSAVCSGGKTLEAYDYLQDV-KKEIRPDGDTYAILMEGWEREGNAVGA 202
RC+ V+ +L+ V + E+ L+ + K + D Y+I++ +EG+ V A
Sbjct: 264 RCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSA 323
Query: 203 KETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAA 262
++ F EM ++ G+ N Y F+ + D ++EA + M + G+ Y
Sbjct: 324 RKVFDEM-LQRGFS-ANSFVYTVFVRVCCEKGD-VKEAERLLSEMEE----SGVSPYDET 376
Query: 263 LEQCVKDHDVRMAEFFWE--------VMLGRKTTLQPTTSMYNSMLALYFYHNDLETARK 314
+ A F WE VM+ R L P+ S +N M+ ++ A +
Sbjct: 377 FNCLIGG----FARFGWEEKGLEYCEVMVTR--GLMPSCSAFNEMVKSVSKIENVNRANE 430
Query: 315 MMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEM 354
++ + +G PD TY+ + R I+G + A ++F EM
Sbjct: 431 ILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 138/362 (38%), Gaps = 44/362 (12%)
Query: 65 FFRWAGHRLLHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSY 124
FF W + L +N+ + L F + + M K + T++++
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCA 231
Query: 125 VAAGLPGDAISTFEVM---------ENYRCVRDVVA--------LNTLMSAVCSG----- 162
L AI FE M Y + DV + L+ AV +G
Sbjct: 232 KRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDA 291
Query: 163 ------GKTL-EAYDY------LQDVKK-EIRPDGDTYAILMEGWEREGNAVGAKETFAE 208
GK EA DY LQ++K +++P+ Y L+E R G A+ F E
Sbjct: 292 IAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNE 351
Query: 209 MVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVK 268
M +E+G P NE + L + R+A++ ++ M+ ++ Y L C
Sbjct: 352 M-LEAGLTP-NEKTLTA-LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA- 407
Query: 269 DHDVRMAEFFWEVMLGRKTTLQ--PTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFP 326
D+ + E + K ++Q P Y +ML +Y E A ++ ++M+ G
Sbjct: 408 --DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQV 465
Query: 327 DSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPNCDAAIRIYLDNRDAFMAMKVW 386
+ + + + L K +++ D VF +K PD C + + + A KV
Sbjct: 466 NVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVM 525
Query: 387 KC 388
C
Sbjct: 526 AC 527
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 8/274 (2%)
Query: 81 SWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVM 140
++ L++ L K+ DA + M +R S + F+S+ S AG ++ + M
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 141 ENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAILMEGWEREGNA 199
+ + +L+ + GK A ++KK RP+ Y +++E + G
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 200 VGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFY 259
A F +M ++G+ PT P+ S L + G + A+K ++SM + PGL Y
Sbjct: 435 EVAMTVFKDME-KAGFLPT--PSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 260 KAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDM 319
+ L R+ + +++L K + +L +Y ++ A K + M
Sbjct: 492 ISLLTLLANK---RLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFM 548
Query: 320 VYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
G ++ +F +K L D++R E
Sbjct: 549 GSSGIKTNNFIIRQLFESCMKN-GLYDSARPLLE 581
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 225 SFLCTLIKGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLG 284
SFLC +RE+ M+ P + Y A +E C K +R A+ W+ M
Sbjct: 405 SFLCK----AGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 285 RKTTLQPTTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKL 344
+ TT YN ++ + E + ++ D M+ RG PD Y + L K K+
Sbjct: 461 EGCKMNLTT--YNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 345 RDASRVF 351
A VF
Sbjct: 519 EAAMEVF 525
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 127 AGLPGDAISTF--EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR--PD 182
AG +A+S E+M+ + C+ V N L+ +C GK++EA YL+ + K++ +
Sbjct: 346 AGKLKEAVSVINKEMMQGH-CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIRE 239
+TY L++G R+G + A + EM+I+S + P +++ +IKG D E
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF-----PGVETYH-MMIKGLCDMDRRYE 458
Query: 240 AVKFFDSMRDRRCYPGLRFYKAALE 264
AV + + M + P +KA E
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAE 483
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 127 AGLPGDAISTF--EVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKEIR--PD 182
AG +A+S E+M+ + C+ V N L+ +C GK++EA YL+ + K++ +
Sbjct: 346 AGKLKEAVSVINKEMMQGH-CLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 183 GDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKG---PDGIRE 239
+TY L++G R+G + A + EM+I+S + P +++ +IKG D E
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHF-----PGVETYH-MMIKGLCDMDRRYE 458
Query: 240 AVKFFDSMRDRRCYPGLRFYKAALE 264
AV + + M + P +KA E
Sbjct: 459 AVMWLEEMVSQDMVPESSVWKALAE 483
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 133/303 (43%), Gaps = 45/303 (14%)
Query: 98 MWDAINSMAKRPGL---ISLATFASVFGSYVAAGLPGDAISTFEVM---ENYRCVRDVVA 151
M DA+ ++ K L + +T+ ++ Y AG P + ++M N ++
Sbjct: 131 MEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRT 190
Query: 152 LNTLMSAVCSGGKTLEAYDYLQDVKK-EIRPDGDTYAILMEGWEREGNAVGAK-ETFAEM 209
N L+ A C K EA++ ++ +++ +RPD TY + + ++G V A+ E +M
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 210 VIESGWDPTNEPAYDSFLCTLIKGP---DG-IREAVKFFDSMRDRRCYPGLRFYKAALEQ 265
V++ P + C ++ G +G +R+ ++F M++ R L + + +
Sbjct: 251 VMKEKAKP------NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 266 CVKDHD----------VRMAEFFWEVML--GRKTTLQPTTSM-----------YNSMLAL 302
V+ D + + F EV L +K +Q T M Y++++
Sbjct: 305 FVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNA 364
Query: 303 YFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
+ +E A ++ +MV G PD+ Y+++ + ++ ++ + A + ++ V
Sbjct: 365 WSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI----VES 420
Query: 363 QPN 365
+PN
Sbjct: 421 RPN 423
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 10/293 (3%)
Query: 74 LHDHTPYSWNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDA 133
++ T +N+++ G + + + SM T+ ++ +A +P
Sbjct: 500 VNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKG 559
Query: 134 ISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYD-YLQDVKKEIRPDGDTYAILMEG 192
E M V D + ++S+ G+ A + Y + V+ I PD Y +L+
Sbjct: 560 RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Query: 193 WEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIK-GPDGIREAV--KFFDSMRD 249
+ GN A ++ E + E+G P N Y+S + K G EA+ K S +
Sbjct: 620 FADTGNVQQAM-SYVEAMKEAGI-PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC-N 676
Query: 250 RRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDL 309
+ YP + + + VR AE ++ M R + T +M ML +Y +
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAM---MLCMYKKNGRF 733
Query: 310 ETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPD 362
E A ++ M D L+YN + + ++A F EMV + PD
Sbjct: 734 EEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 8/245 (3%)
Query: 117 FASVFGSYVAAGLPGDAISTFEVMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK 176
+ +V S+V G A ++ M Y DVV L++A G +A Y++ +K
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 177 KEIRPDGDT-YAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLC--TLIKG 233
+ P Y L++ + + G A+ + +++ + T P + C L
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL--QSCNKTQYPDVYTSNCMINLYSE 695
Query: 234 PDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTT 293
+R+A FDSM+ R F A+ C+ + R E R+ +
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTF---AMMLCMYKKNGRFEEATQIAKQMREMKILTDP 752
Query: 294 SMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSE 353
YNS+L L+ + A + +MV G PD T+ + L+K + A R E
Sbjct: 753 LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEE 812
Query: 354 MVKNE 358
+ K E
Sbjct: 813 IRKKE 817
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 123/302 (40%), Gaps = 41/302 (13%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+N+V+D K+ + + + + S+ATF S+ Y +A +V++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAI----LMEGWERE 196
Y VV+ TLM A + G T + +++K E I P TY++ L GW+ E
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 197 GNAVGAKETFAEMV------IESGWDPTNEPAYDS---FLCTLIKGPDGIREAVKFFDSM 247
+E E +ES P ++ Y++ +LC +K G A F + M
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR-VKHLSG---AFVFLEIM 646
Query: 248 RDRRCYPGLRFYKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYH 306
+ R Y ++ CV + +R A+ F + + +L Y +++ +
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGY-IRKADSFIYSLQEQNVSLSKFA--YTTLIKAHCVK 703
Query: 307 NDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE---CVPDQ 363
D E A K+ +++RG +N+ +RD S V + + + C P Q
Sbjct: 704 GDPEMAVKLFHQLLHRG-------FNV---------SIRDYSAVINRLCRRHLMNCFPGQ 747
Query: 364 PN 365
N
Sbjct: 748 SN 749
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 35/299 (11%)
Query: 82 WNLVVDVLGKNLLFDAMWDAINSMAKRPGLISLATFASVFGSYVAAGLPGDAISTFEVME 141
+N+V+D K+ + + + + S+ATF S+ Y +A +V++
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 142 NYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVKKE-IRPDGDTYAI----LMEGWERE 196
Y VV+ TLM A + G T + +++K E I P TY++ L GW+ E
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590
Query: 197 GNAVGAKETFAEMV------IESGWDPTNEPAYDSFLCTLIKGPDGIREAVKFFDSMRDR 250
+E E +ES P ++ Y++ + L + + A F + M+ R
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR-VKHLSGAFVFLEIMKSR 649
Query: 251 RCYPGLRFYKAALEQ-CVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDL 309
Y ++ CV + +R A+ F + + +L Y +++ + D
Sbjct: 650 NLDASSATYNILIDSLCVYGY-IRKADSFIYSLQEQNVSLSKFA--YTTLIKAHCVKGDP 706
Query: 310 ETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNE---CVPDQPN 365
E A K+ +++RG +N+ +RD S V + + + C P Q N
Sbjct: 707 EMAVKLFHQLLHRG-------FNV---------SIRDYSAVINRLCRRHLMNCFPGQSN 749
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 10/269 (3%)
Query: 118 ASVFGSYVAAGLPGDAISTFE-VMENYRCVRDVVALNTLMSAVCSGGKTLEAYDYLQDVK 176
++V + G P A+ FE +++ V ++V TL+SA+C GK E D ++ ++
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 177 KE-IRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLIKGPD 235
E D Y+ + G+ + G V A EMV E G + + S L +
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV-EKGMN--RDVVSYSILIDGLSKEG 291
Query: 236 GIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSM 295
+ EA+ M P L Y A + K + A + +L ++ +
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL--SVGIEVDEFL 349
Query: 296 YNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMV 355
Y +++ +L A M+ DM RG P LTYN + L ++ +A V S+ V
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-SKGV 408
Query: 356 KNECVPDQPNCDAAIRIYLDNRDAFMAMK 384
+ + D+ I++ N DA + ++
Sbjct: 409 VGDVITYSTLLDSYIKV--QNIDAVLEIR 435
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 127/299 (42%), Gaps = 17/299 (5%)
Query: 62 AVKFFRWAGHRLLHDHTPYSWNL--------VVDVLGKNLLFDAMWDAINSMAKRPGLIS 113
A K F W +L + Y N+ ++++ G+ +F+ + M +R +
Sbjct: 83 AAKKFEWV-EEILEEQNKYP-NMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRT 140
Query: 114 LATFASVFGSYVAAGLPGDAISTFEVMENYRCVR-DVVALNTLMSAVCSGGKTLEAYDYL 172
+F ++ + V + F+ + + DV + NTL+ +C G EA +
Sbjct: 141 ALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALI 200
Query: 173 QDVK-KEIRPDGDTYAILMEGWEREGNAVGAKETFAEMVIESGWDPTNEPAYDSFLCTLI 231
+++ K ++PD T+ IL+ +G ++ +A MV ++ +Y++ L L
Sbjct: 201 DEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR--SYNARLLGLA 258
Query: 232 KGPDGIREAVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQP 291
+ E V FD ++ P + + A ++ V + + A +++ + K +P
Sbjct: 259 M-ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEI--EKNGCRP 315
Query: 292 TTSMYNSMLALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRV 350
++NS+L DLE+A ++ ++ + D + L+KG K +A +
Sbjct: 316 LKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 240 AVKFFDSMRDRRCYPGLRFYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSM 299
A K FD M +R C + A L CV + E ++ + G K +++P + YN++
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG-KLSIEPDVASYNTL 183
Query: 300 LALYFYHNDLETARKMMDDMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVK 356
+ A ++D++ +G PD +T+N++ K + ++++ MV+
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVE 240
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 24/228 (10%)
Query: 148 DVVALNTLMSAVCSGGKTLEAYDYLQDVKKE--IRPDGDTYAILMEGWEREGNAVGAKET 205
D N L+ +C Y+++ +++ + ++PD ++ IL++ N A
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYL 252
Query: 206 FAEMVIESGWDPTNEPAYDSFL--------CTLIKGPDGIREAVKFFDSMRDRRCYPGLR 257
+++ +G+ P D FL CTL KG EAV + M++ P
Sbjct: 253 VSKLG-NAGFKP------DCFLYNTIMKGFCTLSKG----SEAVGVYKKMKEEGVEPDQI 301
Query: 258 FYKAALEQCVKDHDVRMAEFFWEVMLGRKTTLQPTTSMYNSMLALYFYHNDLETARKMMD 317
Y + K V A + + M+ +P T+ Y S++ + A +++
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMV--DAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 318 DMVYRGAFPDSLTYNLMFRFLIKGRKLRDASRVFSEMVKNECVPDQPN 365
+M RG P+ TYN + L K R L D EM+K+ V + N
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKAR-LMDKGMELYEMMKSSGVKLESN 406