Miyakogusa Predicted Gene

Lj6g3v0409400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0409400.1 Non Chatacterized Hit- tr|I3SET8|I3SET8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.28,0,Mss4-like,Mss4-like; no description,Glutathione-dependent
formaldehyde-activating enzyme/centromere ,CUFF.57785.1
         (139 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16940.2 | Symbols:  | carbon-sulfur lyases | chr5:5571797-55...   205   9e-54
AT5G16940.1 | Symbols:  | carbon-sulfur lyases | chr5:5571797-55...   205   9e-54

>AT5G16940.2 | Symbols:  | carbon-sulfur lyases |
           chr5:5571797-5572204 REVERSE LENGTH=135
          Length = 135

 Score =  205 bits (521), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 90/133 (67%), Positives = 109/133 (81%)

Query: 4   ETETVVHNGGCHCKSVRWKVLAPSSVVAWDCNCSNCYMRANNHFVVPAENFELLGDSGKF 63
           E+E + H GGCHC  ++W+V A  SV+AW CNCS+C MR N HF+VP+ NFELL DS  F
Sbjct: 2   ESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKDF 61

Query: 64  ITTYTFGTHTAKHTFCKICGITSFYYPRSNPDGVAVSFRCVDPGTLTHIEIRHFDGKNWE 123
           ITTYTFGTHTAKHTFCK+CGITSFY PRSNPDGVAV+ +CV  GTL HIE++ +DG+NWE
Sbjct: 62  ITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNWE 121

Query: 124 SSYNQTGIASWSK 136
            S+ +TGIAS+SK
Sbjct: 122 MSHKKTGIASFSK 134


>AT5G16940.1 | Symbols:  | carbon-sulfur lyases |
           chr5:5571797-5572204 REVERSE LENGTH=135
          Length = 135

 Score =  205 bits (521), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 90/133 (67%), Positives = 109/133 (81%)

Query: 4   ETETVVHNGGCHCKSVRWKVLAPSSVVAWDCNCSNCYMRANNHFVVPAENFELLGDSGKF 63
           E+E + H GGCHC  ++W+V A  SV+AW CNCS+C MR N HF+VP+ NFELL DS  F
Sbjct: 2   ESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKDF 61

Query: 64  ITTYTFGTHTAKHTFCKICGITSFYYPRSNPDGVAVSFRCVDPGTLTHIEIRHFDGKNWE 123
           ITTYTFGTHTAKHTFCK+CGITSFY PRSNPDGVAV+ +CV  GTL HIE++ +DG+NWE
Sbjct: 62  ITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNWE 121

Query: 124 SSYNQTGIASWSK 136
            S+ +TGIAS+SK
Sbjct: 122 MSHKKTGIASFSK 134