Miyakogusa Predicted Gene
- Lj6g3v0408370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0408370.1 Non Chatacterized Hit- tr|I1LMA2|I1LMA2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36277
PE,68.6,0,RING/U-box,NULL; ARM repeat,Armadillo-type fold; U-box,U box
domain; Modified RING finger domain,U b,CUFF.57784.1
(425 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 352 3e-97
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 336 2e-92
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 305 4e-83
AT3G02840.1 | Symbols: | ARM repeat superfamily protein | chr3:... 256 2e-68
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 199 2e-51
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 198 5e-51
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 194 8e-50
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 187 9e-48
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 154 1e-37
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 139 5e-33
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 137 2e-32
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 125 4e-29
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 121 8e-28
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 120 2e-27
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 119 4e-27
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 115 6e-26
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 113 3e-25
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 113 3e-25
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 108 6e-24
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 103 2e-22
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 99 4e-21
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 97 2e-20
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 96 7e-20
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 91 2e-18
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 91 2e-18
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 88 9e-18
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 87 2e-17
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 87 2e-17
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 83 3e-16
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 83 3e-16
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 81 2e-15
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 79 5e-15
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 79 5e-15
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 79 7e-15
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 79 8e-15
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 78 1e-14
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 5e-14
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 76 5e-14
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 75 8e-14
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 75 1e-13
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 73 5e-13
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 70 3e-12
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 70 4e-12
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 70 4e-12
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 68 1e-11
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 68 1e-11
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 68 2e-11
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 67 2e-11
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 65 9e-11
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 65 1e-10
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 64 1e-10
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 64 1e-10
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 64 2e-10
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 63 4e-10
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 62 7e-10
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 62 1e-09
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 62 1e-09
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 62 1e-09
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 61 2e-09
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 61 2e-09
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 60 2e-09
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 59 4e-09
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 58 2e-08
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 58 2e-08
AT1G56030.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT3G07370.1 | Symbols: ATCHIP, CHIP | carboxyl terminus of HSC70... 52 6e-07
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 352 bits (903), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 279/426 (65%), Gaps = 19/426 (4%)
Query: 11 LRRVRKGKQNQVPDL------PVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEK 64
L R R ++ P L P EI IP F+CP+S+DLMKDPV + TGITYDR SIE
Sbjct: 4 LWRTRSNEKKITPVLSWPESEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIET 63
Query: 65 WIEAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSE 124
WI +GNK CPVTN +LTTFD IPNH++R+MIQ WCV+ S I+RIPTPR PL P EV E
Sbjct: 64 WINSGNKTCPVTNTVLTTFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYE 123
Query: 125 VCSRLLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQ 184
+ +L SA++RGD +C + KIK G E E+NRKCV EN G VL FD F+ +
Sbjct: 124 ISRKLSSATRRGDYEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFS--GDE 181
Query: 185 NHVGVLEEILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVPA 244
+L EIL +LTWM P G EG KL+S S C+ L D R+NAA ++KE+ +
Sbjct: 182 KLTFMLNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILS 241
Query: 245 --EILVET----EGIADGLIEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGL 298
E V + G+A+ L+++++DS+ S+STK+ L I+ +V K I A F+E+GL
Sbjct: 242 LDETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEI--ASEFLEIGL 299
Query: 299 VSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLPLVI-KVLRVSHLASS 357
VS+ +E+IVD A+ CEKAL VLD IC+ + G++ ++NAL +PL++ K+ +VS LA+
Sbjct: 300 VSITVEMIVD-AENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATR 358
Query: 358 FAVSVLRKICDKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLNG-YKGR 416
++S++ K+ + +A+++GAFQK+L++LQVG E TKE ATELLK++N K
Sbjct: 359 SSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLM 418
Query: 417 AECIDS 422
++C+DS
Sbjct: 419 SDCVDS 424
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/428 (44%), Positives = 277/428 (64%), Gaps = 31/428 (7%)
Query: 13 RVRKGKQNQVPDLPVE------EIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWI 66
R R G ++ +PV EI IP+ F+CP+S +LMKDPV + +GITYDR +IEKW
Sbjct: 8 RRRGGSVSKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWF 67
Query: 67 EAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVC 126
E+G + CPVTN +LT+ + IPNH++RRMIQ WC + GIERIPTPR P+ +VSE+C
Sbjct: 68 ESGYQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEIC 127
Query: 127 SRLLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNH 186
RL +A++RGD C+E V K+ G+E ERNRKCV ENGAG+VL FD+F+ + N
Sbjct: 128 ERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENA--NA 185
Query: 187 VGVLEEILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEV---- 242
+LEE + VLTWM+P G EG+ KL++ +S N +V L D +NAA L+KE+
Sbjct: 186 SLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELN 241
Query: 243 --PAEILVETEGIADGLIE-IVKDSIGSNSTKACLATIFNLV-SHKEGIAVAERFVELGL 298
L + G+ + ++ I +DS NS L +I +++ +++E ++ RF+EL L
Sbjct: 242 VTHVHALTKINGVQEAFMKSINRDSTCVNS----LISIHHMILTNQETVS---RFLELDL 294
Query: 299 VSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLP-LVIKVLRVSHLASS 357
V++ +E++VD ++ CEKAL VL+ IC+ KEG++ +RN L +P LV K+L++S
Sbjct: 295 VNITVEMLVD-SENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD- 352
Query: 358 FAVSVLRKICDKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLNGYKGRA 417
VSV+ K+C + + + EAL++GAF+KL+VMLQVGC E TKE TELLK++N
Sbjct: 353 -LVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMN 411
Query: 418 ECIDSSLS 425
+D S S
Sbjct: 412 GFVDRSYS 419
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 181/428 (42%), Positives = 264/428 (61%), Gaps = 47/428 (10%)
Query: 13 RVRKGKQNQVPDLPVE------EIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWI 66
R R G ++ +PV EI IP+ F+CP+S +LMKDP W
Sbjct: 8 RRRGGSVSKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDP----------------WF 51
Query: 67 EAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVC 126
E+G + CPVTN +LT+ + IPNH++RRMIQ WC + GIERIPTPR P+ +VSE+C
Sbjct: 52 ESGYQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEIC 111
Query: 127 SRLLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNH 186
RL +A++RGD C+E V K+ G+E ERNRKCV ENGAG+VL FD+F+ + N
Sbjct: 112 ERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENA--NA 169
Query: 187 VGVLEEILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEV---- 242
+LEE + VLTWM+P G EG+ KL++ +S N +V L D +NAA L+KE+
Sbjct: 170 SLLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGD----QNAAFLIKELLELN 225
Query: 243 --PAEILVETEGIADGLIE-IVKDSIGSNSTKACLATIFNLV-SHKEGIAVAERFVELGL 298
L + G+ + ++ I +DS NS L +I +++ +++E ++ RF+EL L
Sbjct: 226 VTHVHALTKINGVQEAFMKSINRDSTCVNS----LISIHHMILTNQETVS---RFLELDL 278
Query: 299 VSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLP-LVIKVLRVSHLASS 357
V++ +E++VD ++ CEKAL VL+ IC+ KEG++ +RN L +P LV K+L++S
Sbjct: 279 VNITVEMLVD-SENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD- 336
Query: 358 FAVSVLRKICDKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLNGYKGRA 417
VSV+ K+C + + + EAL++GAF+KL+VMLQVGC E TKE TELLK++N
Sbjct: 337 -LVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMN 395
Query: 418 ECIDSSLS 425
+D S S
Sbjct: 396 GFVDRSYS 403
>AT3G02840.1 | Symbols: | ARM repeat superfamily protein |
chr3:618480-619619 FORWARD LENGTH=379
Length = 379
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 222/337 (65%), Gaps = 25/337 (7%)
Query: 107 IERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENG 166
IERI +PR L P + E+ RL +A+ R + C+E V KIK GR G+ N+KC+++NG
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99
Query: 167 AGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGE-EGRLKLSSEASVNCMVWFLG 225
+ + L++ F+ FA + H+ +LEEIL VL+ +P EG K+ S AS+NC+V FL
Sbjct: 100 SVLALSSCFERFA-AARDGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTASLNCLVRFLN 158
Query: 226 GQDLGARKNAARLLKEVPA------EILVETEGIADGLIEIVKDSIGSNSTKACLATIFN 279
G+D R+NAA ++EV A L + EG +GL++I++DS+ ++STKA L I+
Sbjct: 159 GKDAKTRQNAAFCIREVIAVDKRYVYALTDVEGACEGLVKIIRDSVSTSSTKASLMVIYR 218
Query: 280 LVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNA 339
+S + I E+FV+LGLV L+ E++V+ A+K CE++L VL+ CD ++GK+ RNA
Sbjct: 219 AISSNDKI--TEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLRNA 276
Query: 340 LTLPLVI-KVLRVSHLASSFAVSVLRKI--------CDKREEAILIEALQVGAFQKLLVM 390
L +PL++ K+LRVS LA+ +VS+L K+ CD R +L+EALQVGAF+KLLV+
Sbjct: 277 LIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDR---LLVEALQVGAFEKLLVL 333
Query: 391 LQVGCDETTKENATELLKLLNGYKGRAE---CIDSSL 424
LQVGC++ TKE A+ELL+ LN + E C+DSS+
Sbjct: 334 LQVGCEDKTKEKASELLRNLNRCRNEIEKTNCVDSSM 370
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 210/399 (52%), Gaps = 33/399 (8%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKK-CPVTNQILTTFDLI 86
EEI IP F CP+SL++MKDPV + TGITYDR SIEKW+ AG K CPVT Q +T DL
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 87 PNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVG 146
PNH+LRR+IQ WC N+SYG+ERIPTPR P+ E+ ++ SAS + ++C++ +
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRD--SASSHENQVKCLKRLR 125
Query: 147 KIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEE 206
+I E N++C+ G LA + VS + G L + L + + E
Sbjct: 126 QIVS---ENATNKRCLEAAGVPEFLANI------VSNDSENGSLTDEALNLLYHLETSET 176
Query: 207 GRLKLSSEAS----VNCMVWFLGGQDLGARKNAARLLKEV-----PAEILVETEGIADGL 257
L + V + + +R A LLK + P + + + +
Sbjct: 177 VLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEV 236
Query: 258 IEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVD---CADKGT 314
++I+ D I +TKA + + N+ + VE G++S+++E+++D +++
Sbjct: 237 VQILDDRISQKATKAAMHILVNICPWGRN---RHKAVEAGVISVIIELLMDESFTSERRG 293
Query: 315 CEKALGVLDCICDCKEGK-DIAKRNALTLPLVIKVLRVSHLASSFAVSVLR---KICDKR 370
E A+ VLD +C C EG+ + A + K+LRVS AS AV VL + C
Sbjct: 294 PEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCAT- 352
Query: 371 EEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKL 409
A+L E LQ+G KL ++LQV C TKE A ELLKL
Sbjct: 353 -PALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKL 390
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 208/393 (52%), Gaps = 18/393 (4%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
I IP HFRCP+SLDLM DPVT+ TG TYDRTSI+ WI GN CPVT L+ F LIPNH
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 90 SLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRC-VEFVGKI 148
+LRR+IQ+WCV N S G+ERIPTP+ P +P V + S+ + + +R + ++
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRL 131
Query: 149 KGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEGR 208
+G R+ E+NR + + A +L + FA + + L L ++ E
Sbjct: 132 RGLARDSEKNRVLIAGHNAREILVRIL--FADIETTSLSSELVSESLALLVLLHMTETEC 189
Query: 209 LKLSSEAS-VNCMVWFLGGQDLGARKNAARLLKEVPAE--------ILVETEGIADGLIE 259
++S+ S V M L + R NAA L++ V I+ ++ I +G+++
Sbjct: 190 EAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLD 249
Query: 260 IVKDSIGS-NSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKA 318
++K+ I S + K + IF L K+ +A + G +L++ + D+ E+
Sbjct: 250 LLKNPISSRRALKIGIKAIFALCLVKQTRHLA---ISAGAPGILIDRLAADFDRCDTERG 306
Query: 319 LGVLDCICDCKEGKDIAKRNALTLPLVIK-VLRVSHLASSFAVSVLRKICDKREEAILIE 377
L ++ +C EG +ALT+PL++K +LRVS A+ +A L +C EE E
Sbjct: 307 LATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTA-EERCRDE 365
Query: 378 ALQVGAFQKLLVMLQVGCDETTKENATELLKLL 410
A G +LL+++Q C E K A LLKLL
Sbjct: 366 AAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLL 398
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 205/382 (53%), Gaps = 24/382 (6%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKK-CPVTNQILTTFDLIPN 88
I IP HFRCP+SL+LM+DPVT+ TG TYDR SIE W+ GN CPVT L+ F LIPN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 89 HSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRC-VEFVGK 147
H+LRR+IQ+WCV N S G+ERIPTP+ P +P V + S+ + + +R + +
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRR 131
Query: 148 IKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEG 207
++G+ R+ ++NR + + A +L + S ++ E L +L M+P E
Sbjct: 132 LRGFARDSDKNRVLIAAHNATEILIKIL-----FSETTSSELVSESLALLV-MLPITEPN 185
Query: 208 RL-KLSSEAS-VNCMVWFLGGQDLGARKNAARLLKEVPAEI--------LVETEGIADGL 257
+ +SS+ V + L + R NAA L++ V + +E + +G+
Sbjct: 186 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGV 245
Query: 258 IEIVKDSIGS-NSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCE 316
++++++ I S + K + T+F L S K +A + G +L++ + D+ E
Sbjct: 246 LDLLRNPISSRRALKIGIKTLFALCSVKSTRHIA---ITAGAPEILIDRLAADFDRCDTE 302
Query: 317 KALGVLDCICDCKEGKDIAKRNALTLPLVIK-VLRVSHLASSFAVSVLRKICDKREEAIL 375
+AL ++ +C EG +ALT+PL++K +LRVS A+ +A L +C EE
Sbjct: 303 RALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTA-EERWR 361
Query: 376 IEALQVGAFQKLLVMLQVGCDE 397
EA G +LL+M+Q C E
Sbjct: 362 EEAAGAGVVVQLLLMVQSECTE 383
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 223/438 (50%), Gaps = 52/438 (11%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKK-CPVTNQILTTFDLI 86
+EI IP+ F CP+SLD+MKDPV + TGITYDR SIEKW+ +G K CPVT Q++T DL
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 87 PNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVG 146
PNH+LRR+IQ WC N+SYGIERIPTP+ P+ E+ ++ S+S + ++C++ +
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKE--SSSSHLNQVKCLKRLR 120
Query: 147 KIKGWGREGERNRKC-----VIENGAGVVLATVFDSFARVS----------------VQN 185
+I E N++C V E A +V +V D++ S ++N
Sbjct: 121 QIVS---ENTTNKRCLEAAEVPEFLANIVSNSV-DTYNSPSSSLSSSNLNDMCQSNMLEN 176
Query: 186 HV----GVLEEILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKE 241
+++E L VL + + L+++ N + G ++ A
Sbjct: 177 RFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALL 236
Query: 242 V--------PAEILVETEGIADGLIEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERF 293
+ P +I++ + +I+I+ D I +T++ + + +
Sbjct: 237 LKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRN---RHKA 293
Query: 294 VELGLVSLLLEIIVD---CADKGTCEKALGVLDCICDCKEGK-DIAKRNALTLPLVIKVL 349
VE G +S+++E+++D +++ E A+ VLD +C C EG+ + A + K+L
Sbjct: 294 VEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKIL 353
Query: 350 RVSHLASSFAVSVLR---KICDKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATEL 406
RVS + S AV VL + C ++L E LQ+G KL ++LQV C TKE A EL
Sbjct: 354 RVSQITSERAVRVLLSVGRFCAT--PSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKEL 411
Query: 407 LKLLNGYKGRAECIDSSL 424
LKL + C+ +L
Sbjct: 412 LKLHARVWRESPCVPRNL 429
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 212/446 (47%), Gaps = 58/446 (13%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILT-TFDLI 86
EEI IPN+F CP+SL++MKDPVT +GITYDR +I KW+E CPVT Q L DL
Sbjct: 20 EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDLT 78
Query: 87 PNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVG 146
PNH LRR+IQ WCV+N + G+ RI TPR P V E L Q G E +
Sbjct: 79 PNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGRE--ETLQ 136
Query: 147 KIKGWGREGERNRKCVIENGAG------VVLATVFDSFARVSVQNHVGVLEEILEVLTWM 200
K++ +G NR+ + E G VV T D R ++ L+E L +L +
Sbjct: 137 KLEVLAMDG-NNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKG----LDESLRLLHLI 191
Query: 201 -IPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLK---EVPAEILVE--TEGIA 254
IP + + + ++ + + W L +D ++ LL+ E + +VE I
Sbjct: 192 GIPSNDAKTILMENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIVERLNPEIF 251
Query: 255 DGLIEIVKDSIGS-------------NSTKACLA-TIFNLVSH----KEGIAVA------ 290
G+I +KD + S +S++ L T + + H K+ + A
Sbjct: 252 KGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLE 311
Query: 291 --------ERFVELGLVSLLLEI-IVDCADKGTCEKALGVLDCICDCKEGKD--IAKRNA 339
V+LG VS L+E+ I +K E LGVL +C C G+ +A R
Sbjct: 312 TSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGG 371
Query: 340 LTLPLVIKVLRVSHLASSFAVSVLRKICDKREEAILIEAL-QVGAFQKLLVMLQVGCDET 398
+ + + ++LRVS A A+S+L + E +++E + VG +KL +L + C
Sbjct: 372 IAV-VTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLN 430
Query: 399 TKENATELLKLLNGYKGRAECIDSSL 424
KE A E+LK + CID +L
Sbjct: 431 LKEKAKEILKDHFDEWKKFPCIDITL 456
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 182/396 (45%), Gaps = 50/396 (12%)
Query: 32 IPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSL 91
IP+ F CP+SL+ M+DPVTL TG TY+R +I KW G+ CP T Q L + PN +L
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIKGW 151
+I W F V + S +G I + + K KG
Sbjct: 124 HHLIYTW---------------------FSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQ 162
Query: 152 GREGERN------------RKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTW 199
R + RK V+E G V++++ F +V + E++ +L
Sbjct: 163 ARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGS------EVVAILVS 216
Query: 200 MIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVPAEI-----LVETEGIA 254
+ + + L A V+ +V L + N ARL++ + E LV + +
Sbjct: 217 L-DLDSDSKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLL 275
Query: 255 DGLIEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGT 314
GL+ +VKD N L + + HK+ V V +G V L++I+ D
Sbjct: 276 VGLMRLVKDKRHRNGVSPALRLLKPISVHKQ---VRSLMVSIGAVPQLVDIL-PSLDPEC 331
Query: 315 CEKALGVLDCICDCKEGKDIAKRNALTLPLVIKVL-RVSHLASSFAVSVLRKICDKREEA 373
E AL VLD +C EG+ K +A T+P ++VL RVS +++A+S+L +C E
Sbjct: 332 LELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEE 391
Query: 374 ILIEALQVGAFQKLLVMLQVGCDETTKENATELLKL 409
A++VG KLL+++Q GCD K+ + ELLKL
Sbjct: 392 CSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 186/384 (48%), Gaps = 26/384 (6%)
Query: 32 IPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSL 91
IP+ F CP+SL+ M+DPVTL TG TY+R++I KW G+ CP T Q L + PN +L
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIKGW 151
++I W + Y + + + E+ L ++ G V + ++K
Sbjct: 120 HQLIYTWF--SQKYVLMKKRSEDVQGRAIEI-------LGTLRKAKGKAKVHALSELKQV 170
Query: 152 GREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEGRLKL 211
+K V++ G V++++ F +V + E + +L + + + L
Sbjct: 171 VMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGS------EAIAILV-NLELDSDSKAGL 223
Query: 212 SSEASVNCMVWFLGGQDLGARKNAARLLKEVPAEI-----LVETEGIADGLIEIVKDSIG 266
A V+ MV L + + N ARL+ + E LV + + GL+ +VKD
Sbjct: 224 MQPARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRR 283
Query: 267 SNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKALGVLDCIC 326
N L + ++ HK+ V V +G V L++++ C D E AL VLD +C
Sbjct: 284 RNGVSPALTLLKSVSVHKQ---VRNLLVRIGAVPQLVDVL-PCLDVECLESALFVLDSLC 339
Query: 327 DCKEGKDIAKRNALTLPLVIKVL-RVSHLASSFAVSVLRKICDKREEAILIEALQVGAFQ 385
EG+ K + T+P +++L +VS +++A+S+L +C E A++VG
Sbjct: 340 LESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAA 399
Query: 386 KLLVMLQVGCDETTKENATELLKL 409
KLL+++Q GCD K+ + ELLKL
Sbjct: 400 KLLLVIQSGCDPALKQRSAELLKL 423
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 186/392 (47%), Gaps = 27/392 (6%)
Query: 32 IPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSL 91
+P F+CP+SLD+MK PV+L TG+TYDR SI++W++ GN CP T QIL + +PN +L
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIKGW 151
R+I W S I R +P + + + + + + R KI +
Sbjct: 71 HRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERFRIENDAR-----SKILRF 120
Query: 152 GREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEGRLKL 211
RE + NR+ + V + S +R + + ++ E +++L+ MI R +L
Sbjct: 121 ARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILS-MIRRKIFDRRRL 179
Query: 212 SSEASVN---CMVWFL-----GGQDLGARKNAARLLKEVPAE---ILVETEGIADGLIEI 260
S+ N C+ F G L +A V AE I+ + EG+ +I++
Sbjct: 180 SNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKL 239
Query: 261 VKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVD-CADKGTCEKAL 319
+ S+ +A L+ + + S K V + LV+ L ++ D EK L
Sbjct: 240 ISSDSDSSLIEANLSLLIAIASSKR---VKLALIREKLVTKLTSLLTDPTTSVSVTEKCL 296
Query: 320 GVLDCICDCKEGKDIAKRNALTLPLVIKVLRVSHLASSFAVSVLRKICDKREEAILIEA- 378
+L+ I CKEG+ +V K+++VS A+ AV+VL +C +E +A
Sbjct: 297 KLLEAISSCKEGRSEICDGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQDAV 356
Query: 379 LQVGAFQKLLVMLQVGCDETTKENATELLKLL 410
+++ K+L++LQ C T + T+LLK+
Sbjct: 357 IRINGVTKILLLLQSNCSLTVRHMLTDLLKVF 388
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 38/396 (9%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIP 87
+++ IP F CPVSL+LMKDPV + TG TY+R I++WI+ GN CP T Q L F L P
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTP 296
Query: 88 NHSLRRMIQDWCVKNSSYGIERIPTPRAPL-----NPFEVSEVCSRLLSASQRGDGIRCV 142
N+ LR +I WC +++ I P + N ++S + + + S R R
Sbjct: 297 NYVLRSLISRWCAEHN------IEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDR-R 349
Query: 143 EFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVG-VLE-EILEVLTWM 200
V +I+ + NR + E GA VL + S + +N + VL I E +
Sbjct: 350 NAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKEL 409
Query: 201 IPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVP----AEILVETEGIADG 256
I F +V +V L + AR+NAA L + +I++ G
Sbjct: 410 IMFA----------GAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPA 459
Query: 257 LIEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCE 316
L++++++ A A +FNL + R V G+V+ L++++ D +
Sbjct: 460 LVDLLENGTPRGKKDAATA-LFNLCIYHGNKG---RAVRAGIVTALVKMLSDSTRHRMVD 515
Query: 317 KALGVLDCICDCKEGKD-IAKRNALTLPLVIKVLRVSHLAS-SFAVSVLRKICDKREEAI 374
+AL +L + + ++ K I K N TLP +I +L+ + A ++L +C KR+
Sbjct: 516 EALTILSVLANNQDAKSAIVKAN--TLPALIGILQTDQTRNRENAAAILLSLC-KRDTEK 572
Query: 375 LIEALQVGAFQKLLVMLQVGCDETTKENATELLKLL 410
LI ++GA L+ + + G E K A LL+LL
Sbjct: 573 LITIGRLGAVVPLMDLSKNGT-ERGKRKAISLLELL 607
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 192/401 (47%), Gaps = 34/401 (8%)
Query: 31 VIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHS 90
VIP +FRCP+SL+LMKDPV + TG TY+R+SI+KW++AG+K CP + + L L PN+
Sbjct: 247 VIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 306
Query: 91 LRRMIQDWCVKNSSYGIERIPTPRAPLNPFEV----SEVCSR-----LLSASQRGDGIRC 141
L+ +I WC N GIE +P + ++ S C R LL G +
Sbjct: 307 LKSLIALWCESN---GIE-LPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ 362
Query: 142 VEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMI 201
G+++ + NR C+ E GA +L + S + ++ V L L I
Sbjct: 363 RAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTAL------LNLSI 416
Query: 202 PFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVPA----EILVETEGIADGL 257
G +G + ++ +V L + AR+NAA L + ++ + G L
Sbjct: 417 NEGNKG--AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQAL 474
Query: 258 IEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEK 317
I ++++ A A IFNL ++ R V+ G+V L ++ D A G ++
Sbjct: 475 ISLLEEGTRRGKKDAATA-IFNLCIYQ---GNKSRAVKGGIVDPLTRLLKD-AGGGMVDE 529
Query: 318 ALGVLDCICDCKEGKDIAKRNALTLPLVIKVLRV-SHLASSFAVSVLRKICDKREEAILI 376
AL +L + +EGK A A ++P++++++R S A ++L +C E + +
Sbjct: 530 ALAILAILSTNQEGK-TAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNV 588
Query: 377 EALQVGAFQKLLVMLQVGCDETTKENATELLKLLNGYKGRA 417
A +VGA L + + G D K A LL+L+ +G A
Sbjct: 589 -AREVGADVALKELTENGTDR-AKRKAASLLELIQQTEGVA 627
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 201/415 (48%), Gaps = 57/415 (13%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
I +P FRCP+SLD+MK PV+L TG+TYDR SI++W++ GN CP T QIL D IPN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 90 SLRRMIQDW--------CVKNSSYGIERIPTPRAPLNPFEVSEVCSRL-LSASQRGDGIR 140
+L+R+I+ W CV+++ AP E+++ R+ + +R D
Sbjct: 68 TLQRLIEIWSDSVRRRTCVESAELA--------APTRD-EIADAIDRVKIEKEERDDR-- 116
Query: 141 CVEFVGKIKGWGREGERNR----------KCVIENGAGVVLATVFDSFARVSVQNHVGVL 190
E + KI +GRE + NR K +++ V T + + V VQ V +L
Sbjct: 117 --EVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLV-VQEAVKIL 173
Query: 191 EEILEVLTWMIPFGE----EGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVPAE- 245
I ++ F GR +LS +V+ ++ + + A LL+ + +
Sbjct: 174 STIRSKVSDRRRFSNLILTNGRDRLS------VIVYLFKTGNVELKIDCAGLLEFIAVDA 227
Query: 246 ----ILVETEGIADGLIE-IVKDSIGS--NSTKACLATIFNLVSHKEGIAVAERFVELGL 298
++ E +G+ L++ I KDS S S+ +CL I + K + + E+ + G
Sbjct: 228 ESKLLIAERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNL-LREKLI--GD 284
Query: 299 VSLLLEIIVDCADKGTCEKALGVLDCICDCKEGK-DIAKRNALTLPLVI-KVLRVSHLAS 356
V+ LL EK L +L+ + KEG+ +I + L V+ K+++VS A+
Sbjct: 285 VTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAAT 344
Query: 357 SFAVSVLRKICDKREEAILIEAL-QVGAFQKLLVMLQVGCDETTKENATELLKLL 410
AV+VL + +E +EA+ V K+L++LQ C + T+LLK+
Sbjct: 345 EHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVF 399
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 180/391 (46%), Gaps = 33/391 (8%)
Query: 31 VIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHS 90
VIP+ FRCP+SL++M+DPV + +G TY+RT IEKWIE G+ CP T Q LT+ L PN+
Sbjct: 255 VIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYV 314
Query: 91 LRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCS--------RLLSASQRGDGIRCV 142
LR +I WC N IE P P + L P +VS S L+ G+
Sbjct: 315 LRSLIAQWCEAND---IEP-PKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQR 370
Query: 143 EFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIP 202
G+I+ + NR + E GA +L + S +Q H + +L I
Sbjct: 371 SAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLL-STPDSRIQEH-----SVTALLNLSI- 423
Query: 203 FGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVPA----EILVETEGIADGLI 258
E + + S ++ +V L + AR+NAA L + ++ + G L+
Sbjct: 424 -CENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLV 482
Query: 259 EIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKA 318
++ + A A +FNL ++ A + G++ L ++ + G ++A
Sbjct: 483 VLLNEGTQRGKKDAATA-LFNLCIYQGNKGKA---IRAGVIPTLTRLLTEPG-SGMVDEA 537
Query: 319 LGVLDCICDCKEGKDIAKRNALTLPLVIKVLRV-SHLASSFAVSVLRKICDKREEAILIE 377
L +L + EGK I ++ +P +++ +R S A +VL +C + L+E
Sbjct: 538 LAILAILSSHPEGKAIIG-SSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQH-LVE 595
Query: 378 ALQVGAFQKLLVMLQVGCDETTKENATELLK 408
A ++G L+ + G D K A +LL+
Sbjct: 596 AQKLGLMGPLIDLAGNGTDR-GKRKAAQLLE 625
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 176/396 (44%), Gaps = 29/396 (7%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIP 87
+ + IP F CP+SL+LMKDP + TG TY+R+ I++WI+ GN CP T Q L F L P
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP 298
Query: 88 NHSLRRMIQDWCVKNS-----SYGIERIPTPRAPLNPFEVSEVCSRLLS---ASQRGDGI 139
N+ LR +I WC K++ Y R R L +SQ +
Sbjct: 299 NYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 140 RCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTW 199
R V +I+ + NR + E GA VL + S Q + IL + +
Sbjct: 359 RTA--VSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTC--ILNLSIY 414
Query: 200 MIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVP----AEILVETEGIAD 255
E + + +V +V L + AR+NAA L + +I++ G
Sbjct: 415 -----EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIM 469
Query: 256 GLIEIVKDSIGSNSTKACLAT-IFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGT 314
L+++++ GS K AT +FNL ++ R V G+V L++++ D + +
Sbjct: 470 ALVDLLQ--YGSVRGKKDAATALFNLCIYQGNKG---RAVRAGIVKPLVKMLTDSSSERM 524
Query: 315 CEKALGVLDCICDCKEGKDIAKRNALTLPLVIKVLRVSHLASSFAVSVLRKICDKREEAI 374
++AL +L + + K R PL+ + + A ++L +C KR+
Sbjct: 525 ADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLC-KRDTEK 583
Query: 375 LIEALQVGAFQKLLVMLQVGCDETTKENATELLKLL 410
LI ++GA L+ + + G E K A LL+LL
Sbjct: 584 LISIGRLGAVVPLMELSRDGT-ERAKRKANSLLELL 618
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 176/396 (44%), Gaps = 29/396 (7%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIP 87
+ + IP F CP+SL+LMKDP + TG TY+R+ I++WI+ GN CP T Q L F L P
Sbjct: 91 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP 150
Query: 88 NHSLRRMIQDWCVKNS-----SYGIERIPTPRAPLNPFEVSEVCSRLLS---ASQRGDGI 139
N+ LR +I WC K++ Y R R L +SQ +
Sbjct: 151 NYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 210
Query: 140 RCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTW 199
R V +I+ + NR + E GA VL + S Q + IL + +
Sbjct: 211 RTA--VSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTC--ILNLSIY 266
Query: 200 MIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVP----AEILVETEGIAD 255
E + + +V +V L + AR+NAA L + +I++ G
Sbjct: 267 -----EHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIM 321
Query: 256 GLIEIVKDSIGSNSTKACLAT-IFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGT 314
L+++++ GS K AT +FNL ++ R V G+V L++++ D + +
Sbjct: 322 ALVDLLQ--YGSVRGKKDAATALFNLCIYQGNKG---RAVRAGIVKPLVKMLTDSSSERM 376
Query: 315 CEKALGVLDCICDCKEGKDIAKRNALTLPLVIKVLRVSHLASSFAVSVLRKICDKREEAI 374
++AL +L + + K R PL+ + + A ++L +C KR+
Sbjct: 377 ADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLC-KRDTEK 435
Query: 375 LIEALQVGAFQKLLVMLQVGCDETTKENATELLKLL 410
LI ++GA L+ + + G E K A LL+LL
Sbjct: 436 LISIGRLGAVVPLMELSRDGT-ERAKRKANSLLELL 470
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 189/406 (46%), Gaps = 46/406 (11%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
++ P FRCP+SL+LM DPV + +G TY+R I+KW+E G+ CP T + LT+ + PN+
Sbjct: 254 LIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNY 313
Query: 90 SLRRMIQDWCVKNSSYGIERIPTPRAP--------------LNPFEVSEVCSRLLS-ASQ 134
LR +I WC N GIE P+ P E +++ LL SQ
Sbjct: 314 VLRSLIAQWCESN---GIE---PPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQ 367
Query: 135 RGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEIL 194
+ + R G+I+ ++ NR + +GA +L + Q H +
Sbjct: 368 QPEDRRSA--AGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHA-----VT 420
Query: 195 EVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARKNAARLLKEVPA----EILVET 250
+L I +G++ SS A V +V L + AR+NAA L + ++ +
Sbjct: 421 SILNLSICQENKGKIVYSSGA-VPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGA 479
Query: 251 EGIADGLIEIVKDSIGSNSTKACLAT-IFNLVSHKEGIAVAERFVELGLVSLLLEIIVDC 309
G L+ ++ + GS K AT +FNL + A V GLV +L+ ++ +
Sbjct: 480 AGAIPPLVTLLSE--GSQRGKKDAATALFNLCIFQGNKGKA---VRAGLVPVLMRLLTE- 533
Query: 310 ADKGTCEKALGVLDCICDCKEGK-DIAKRNALTLPLVIKVLRV-SHLASSFAVSVLRKIC 367
+ G +++L +L + +GK ++ +A +P+++ +R S + +VL +C
Sbjct: 534 PESGMVDESLSILAILSSHPDGKSEVGAADA--VPVLVDFIRSGSPRNKENSAAVLVHLC 591
Query: 368 DKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLNGY 413
++ LIEA ++G L+ M + G D K A +LL + +
Sbjct: 592 SWNQQH-LIEAQKLGIMDLLIEMAENGTDR-GKRKAAQLLNRFSRF 635
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 201/412 (48%), Gaps = 57/412 (13%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
I +P+ F+CP+SLD+M+ PV+L TG+TYDR SI++W++ GN CP T Q+L T D +PN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 90 SLRRMIQDWC-----VKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEF 144
+L+R+I W N + P+ R EV+ + RL+S +E
Sbjct: 70 TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMS----------LEN 119
Query: 145 VGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFG 204
+ KI + ++ + NR+ + + V + + ++ + + IL+
Sbjct: 120 LMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAI-RILD--------- 169
Query: 205 EEGRLKLSSEASVNCMVWFLGGQ------------DLGARKNAARLLKEVPAE-----IL 247
+K+ E N M+ GG +L ++ + R+L + + ++
Sbjct: 170 ---SIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMI 226
Query: 248 VETEGIADGLIEIVKD-SIGSNSTKACL-ATIFNLVSHKEGIAVAERFVELGLVSLLLEI 305
E +G+ L E++K SI +S + + A++ L++ + V + + ++ + +I
Sbjct: 227 AERDGV---LTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDI 283
Query: 306 IV--DCADKGTCEKALGVLDCICDCKEGK-DI-AKRNALTLPLVI-KVLRVSHLASSFAV 360
++ + EK+L +L+ + +EG+ +I N + V+ K+L+VS A+ AV
Sbjct: 284 LLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAV 343
Query: 361 SVLRKICDK-REEAILIEALQ-VGAFQKLLVMLQVGCDETTKENATELLKLL 410
++L +C RE+ + E ++ KLLV++Q C ++ A +L+K+L
Sbjct: 344 TILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVL 395
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 13/211 (6%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
+++P+ F CP++L++M DPV + TG TY++ SI+KW +AG+K CP T Q L L PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 90 SLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIK 149
+L+ +I WC KN+ E+ +P + + + LS+SQ + R V+ +++
Sbjct: 348 ALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVK---QMR 404
Query: 150 GWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWM-IPFGEEGR 208
RE NR +I N + L S+ +Q + V T + + E +
Sbjct: 405 LLARENPENR-VLIANAGAIPLLVQLLSYPDSGIQENA--------VTTLLNLSIDEVNK 455
Query: 209 LKLSSEASVNCMVWFLGGQDLGARKNAARLL 239
+S+E ++ ++ L + AR+N+A L
Sbjct: 456 KLISNEGAIPNIIEILENGNREARENSAAAL 486
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 32/318 (10%)
Query: 3 LSWTRRNVLRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSI 62
+ W N ++ RKG Q ++ I +P F CP+SLDLM DPV + TG TYDR SI
Sbjct: 278 MEWWIENNPKKPRKGFVAQ--EIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSI 335
Query: 63 EKWIEAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKNS-SYGIERIPTPRAPL---- 117
+WIE G+ CP T Q+L ++PN +L+ +I WC + SY E +P
Sbjct: 336 ARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASAL 395
Query: 118 --------NPFEVSEVCSRLLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGV 169
N VS + L SQ + E I+ + G+ NR + E GA
Sbjct: 396 PTKAAVEANKATVSILIKYLADGSQAAQTVAARE----IRLLAKTGKENRAYIAEAGAIP 451
Query: 170 VLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDL 229
L + S ++ +N V + L I + R+ + + + + G +
Sbjct: 452 HLCRLLTSENAIAQENSVTAM------LNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTV 505
Query: 230 GARKNAARLLKEVPAEILVETE-GIADGLIEIVKDSIGSNS---TKACLATIFNLVSHKE 285
A++NAA L + A + I D +E + + + + K + ++NL +H +
Sbjct: 506 EAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPD 565
Query: 286 GIAVAERFVELGLVSLLL 303
+ R +E G VS L+
Sbjct: 566 NCS---RMIEGGGVSSLV 580
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 14 VRKGKQNQVPDL----PVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAG 69
V G PD + + IP FRCP++L+LM+DPV + TG TYDR SI+ WI++G
Sbjct: 252 VLYGPSTPAPDFRRHQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSG 311
Query: 70 NKKCPVTNQILTTFDLIPNHSLRRMIQDWC----VKNSSYGI---ERIPTPRA-PLNPFE 121
+ CP T Q+L L+PN +L+ +I WC + YG E P A
Sbjct: 312 HNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMM 371
Query: 122 VSEVCSRLLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARV 181
VS + +L A G V +++ + R C+ E GA + + A
Sbjct: 372 VSFLIEKLSVADSNG-------VVFELRALAKSDTVARACIAEAGA---IPKLVRYLATE 421
Query: 182 SVQNHVGVLEEILEVLTWMIPFGEEGRLK-LSSEASVNCMVWFL-GGQDLGARKNAARLL 239
+ + IL + E+ + + + ++ ++N ++ L G A+ NAA L
Sbjct: 422 CPSLQINAVTTILN-----LSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANAAATL 476
Query: 240 KEVPA-----EILVETEGIADGLIEIVKDSIGSNSTKACLATIFNLVSHKEGIAVAERFV 294
+ L + GL+++ K ++S + L I NLV+ +E + RFV
Sbjct: 477 FSLAGVSAYRRRLGRKARVVSGLVDLAKQG-PTSSKRDALVAILNLVAERENVG---RFV 532
Query: 295 ELGLV 299
E G++
Sbjct: 533 EAGVM 537
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 2 VLSWTRRNVLRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTS 61
LS R +R++ K ++ +E + P FRCP+S +LM+DPV L +G TYD+
Sbjct: 48 ALSALREATMRKMAKSSSLEM----LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLF 103
Query: 62 IEKWIEAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKN 102
I+KW+ +GN+ CP T Q+L L PN +R MI WC KN
Sbjct: 104 IQKWLSSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKKN 144
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 36/347 (10%)
Query: 32 IPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILT-TFDLIPNHS 90
+PN FRCP+SL++M DPV L +G T+DR SI++WI++GN+ CP+T L+ T LIPNH+
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 91 LRRMIQDWC---VKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGK 147
LR +I ++ +K SS P + + + + S L+ SQ +E + +
Sbjct: 65 LRSLILNFAHVSLKESSR-----PRTQQEHSHSQSQALISTLV--SQSSSNASKLESLTR 117
Query: 148 IKGWGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEG 207
+ + R+ V E+GA DS + VL+E L + ++
Sbjct: 118 LVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQ--------VLQEKSLSLLLNLSLEDDN 169
Query: 208 RLKLSSEASVNCMVWFLGGQDLGARKNAARLLK-----EVPAEILVETEGIADGLIEIVK 262
++ L ++ + +V L + AA LL EV + L+ +++
Sbjct: 170 KVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLR 229
Query: 263 DSIGSNSTKACLAT-IFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKALGV 321
+G++ + AT ++ L S + +R V+ G V +L+E AD G E+A+ V
Sbjct: 230 --VGNDRERKESATALYALCSFPDN---RKRVVDCGSVPILVE----AADSGL-ERAVEV 279
Query: 322 LDCICDCKEGKDIAKRNALTLPLVIKVLRVSHLAS-SFAVSVLRKIC 367
L + C+ G++ + + + +++ VLR +L +++ +L +C
Sbjct: 280 LGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLC 326
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 149/314 (47%), Gaps = 49/314 (15%)
Query: 16 KGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPV 75
K + + L VE+++ CP+SL++M DPV + TG TYDR+SI KW +GN CP+
Sbjct: 278 KKDHDLIRGLKVEDLL------CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPI 331
Query: 76 TNQILTTFDLIPNHSLRRMIQDWCVKNSSY--GIERIPTPRAPLNPFEVS-----EVCSR 128
T +ILT+ +L+ N S+R++I+ C N GI R + P ++ ++ ++
Sbjct: 332 TGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAK 391
Query: 129 LLSASQRGDGIRCV-EFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSF-ARVSVQNH 186
L++ G + V +I+ + NR C+++ GA L + S R+
Sbjct: 392 FLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAM 451
Query: 187 VGVLE-------------EILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLGARK 233
G+L E L++L ++ G + +L S ++ +++ L + +
Sbjct: 452 AGILNLSKHVTGKSKIAGEGLKILVEILNEGAKTETRLYSASA----LFY-----LSSVE 502
Query: 234 NAARLLKEVPAEILVETEGIADGLIEIVK-DSIGSNSTKACLATIFNLVSHKEGIAVAER 292
+ +RL+ E P I GL+ IVK D G ++ ++ L + L+ + R
Sbjct: 503 DYSRLIGENPDAI--------PGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDN---HWR 551
Query: 293 FVELGLVSLLLEII 306
+ G V +LL+++
Sbjct: 552 VLAAGAVPILLDLL 565
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
I IP +FRCP+S +LM DPV + +G T+DRTSI+KW++ G CP T Q+LT +LIPN+
Sbjct: 200 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 259
Query: 90 SLRRMIQDWCVKN 102
+++ MI W N
Sbjct: 260 TVKAMIASWLEAN 272
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
I IP +FRCP+S +LM DPV + +G T+DRTSI+KW++ G CP T Q+LT +LIPN+
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 90 SLRRMIQDWCVKN 102
+++ MI W N
Sbjct: 296 TVKAMIASWLEAN 308
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 176/449 (39%), Gaps = 83/449 (18%)
Query: 31 VIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHS 90
V P RCP+SL LM DPV + +G TY+R IEKW G+ CP T Q L L PN+
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNC 330
Query: 91 LRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCS-RLLSASQRGDGIRCVEFVGKIK 149
++ +I WC +N + + P P E ++ RL + + V +G K
Sbjct: 331 VKGLIASWCEQNGT---------QIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYK 381
Query: 150 GWGRE---GERNRKCVIENG---AGVVLATVFDSFARVSV----QNHVGVLEE------- 192
G + E N V+E V + + ++V Q+ + VL E
Sbjct: 382 LKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKK 441
Query: 193 --ILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLG---------GQDLGA---------- 231
++E + ++ EE R+ + + V ++ FLG QD GA
Sbjct: 442 CKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNN 501
Query: 232 RKNAARLLKEVPAEIL------VETEGIADG-----------------------LIEIVK 262
+N +L +L E+ G A L+++++
Sbjct: 502 NRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQ 561
Query: 263 DSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKALGVL 322
I + L ++NL ++ I + ++ L ++ + EK+L VL
Sbjct: 562 KEIETQCKLDALHALYNLSTYSPNIPA---LLSSNIIKSLQGLLASTGENLWIEKSLAVL 618
Query: 323 DCICDCKEGKDIAKRNALTLPLVIKVLRVSHLA-SSFAVSVLRKICDKREEAILIEALQV 381
+ +EGKD A + + + VL + AVS L +C+ RE I + LQ
Sbjct: 619 LNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQM-VLQE 677
Query: 382 GAFQKLLVMLQVGCDETTKENATELLKLL 410
G LV + V +E + +LL L
Sbjct: 678 GVIPS-LVSISVNGTPRGREKSQKLLMLF 705
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 176/449 (39%), Gaps = 83/449 (18%)
Query: 31 VIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHS 90
V P RCP+SL LM DPV + +G TY+R IEKW G+ CP T Q L L PN+
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNC 330
Query: 91 LRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCS-RLLSASQRGDGIRCVEFVGKIK 149
++ +I WC +N + + P P E ++ RL + + V +G K
Sbjct: 331 VKGLIASWCEQNGT---------QIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYK 381
Query: 150 GWGRE---GERNRKCVIENG---AGVVLATVFDSFARVSV----QNHVGVLEE------- 192
G + E N V+E V + + ++V Q+ + VL E
Sbjct: 382 LKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKK 441
Query: 193 --ILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLG---------GQDLGA---------- 231
++E + ++ EE R+ + + V ++ FLG QD GA
Sbjct: 442 CKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNN 501
Query: 232 RKNAARLLKEVPAEIL------VETEGIADG-----------------------LIEIVK 262
+N +L +L E+ G A L+++++
Sbjct: 502 NRNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQ 561
Query: 263 DSIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKALGVL 322
I + L ++NL ++ I + ++ L ++ + EK+L VL
Sbjct: 562 KEIETQCKLDALHALYNLSTYSPNIPA---LLSSNIIKSLQGLLASTGENLWIEKSLAVL 618
Query: 323 DCICDCKEGKDIAKRNALTLPLVIKVLRVSHLA-SSFAVSVLRKICDKREEAILIEALQV 381
+ +EGKD A + + + VL + AVS L +C+ RE I + LQ
Sbjct: 619 LNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQM-VLQE 677
Query: 382 GAFQKLLVMLQVGCDETTKENATELLKLL 410
G LV + V +E + +LL L
Sbjct: 678 GVIPS-LVSISVNGTPRGREKSQKLLMLF 705
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 15 RKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCP 74
R+ Q VP P RCP+SL LM DPV + +G TY+R IEKW G+ CP
Sbjct: 271 RRSSQMSVP---------PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCP 321
Query: 75 VTNQILTTFDLIPNHSLRRMIQDWCVKN 102
T+Q L+ L PN+ ++ +I WC +N
Sbjct: 322 KTHQQLSHLCLTPNYCVKALISSWCEQN 349
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 15 RKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCP 74
RK Q +P P RCP+SL LM DPV + +G TY+R IEKW G+ CP
Sbjct: 267 RKSGQMPIP---------PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCP 317
Query: 75 VTNQILTTFDLIPNHSLRRMIQDWCVKN 102
T Q L L PN+ ++ +I WC +N
Sbjct: 318 KTQQQLPHLSLTPNYCVKGLIASWCEQN 345
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 14 VRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKC 73
+ K K N+ + P E F+CP+S+++M+DP G TY+ KW+ +G +
Sbjct: 220 IEKSKSNESDEDPRLE-----DFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTS 274
Query: 74 PVTNQILTTFDLIPNHSLRRMIQDWCVKNSSY 105
P TN+ L +L+PNH+LR +I+DW KN +Y
Sbjct: 275 PKTNKPLENHNLVPNHTLRIIIKDWLEKNPNY 306
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
+ I F CP+SL++M DPV + +G TY++ I++WI+ G K CP T Q LT LIPN+
Sbjct: 231 VAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNY 290
Query: 90 SLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIK 149
+++ +I +WC N ++P P + E+S + S S G + + K
Sbjct: 291 TVKALIANWCETNDV----KLPDPNKSTSLNELSPLLSCTDSIPSTGADVSARKVSNKSH 346
Query: 150 GW 151
W
Sbjct: 347 DW 348
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 30 IVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNH 89
+ I F CP+SL++M DPV + +G TY++ I++WI+ G K CP T Q LT LIPN+
Sbjct: 228 VAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNY 287
Query: 90 SLRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIK 149
+++ +I +WC N ++P P + E+S + S S G + + K
Sbjct: 288 TVKALIANWCETNDV----KLPDPNKSTSLNELSPLLSCTDSIPSTGADVSARKVSNKSH 343
Query: 150 GW 151
W
Sbjct: 344 DW 345
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 160/352 (45%), Gaps = 30/352 (8%)
Query: 34 NHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLRR 93
+ RCP+SL++M DPV L +G TYDR+SI KW +GN CP T + L + L+ N S+++
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 94 MIQDWCVKN----SSYGIERIPTPRAPLNPFEVSEVCSRLLSASQ-RGDGIRCVEFVGKI 148
+IQ + +N G +++ + L E ++ + L+ +GD V+ + +I
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAES-LAAEEAGKLTAEFLAGELIKGDEEEMVKALVEI 398
Query: 149 KGWGREGERNRKCVIENGAGVVLATVFDS-FARVSVQNHVGVLEEILEVLTWMIPFGEEG 207
+ + R C++E G L + S R+ G++ ++ GE+G
Sbjct: 399 RILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDG 458
Query: 208 RLKLSSEASVNCMVWFLG-GQDLGARKNAARLLKEVP-----AEILVETEGIADGLIEIV 261
+ +V L G +R+ AA L + + ++ E GL+ IV
Sbjct: 459 -------GGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIV 511
Query: 262 KD-SIGSNSTKACLATIFNLVSHKEGIAVAERFVELGLVSLLLEII-VDCADKGTCEKAL 319
K G ++ + L I +L+ ++ R + G+V +LL+++ + G ++
Sbjct: 512 KSCDYGDSAKRNALIAIRSLLMNQPD--NHWRILAAGIVPVLLDLVKSEEISDGVTADSM 569
Query: 320 GVLDCICDCKEGK-DIAKRNALTLPLVIKVL---RVSHLASSFAVSVLRKIC 367
+L + + +G + +R L L +K+L VS V++L +C
Sbjct: 570 AILAKMAEYPDGMISVLRRGGLK--LAVKILGSSEVSPATKQHCVALLLNLC 619
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P++F CP+S ++M++P G TY+ S+ +W++ G++ P+TN L +L+PNH+LR
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 93 RMIQDWCVKNS 103
IQ+W +NS
Sbjct: 558 SAIQEWLQRNS 568
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 32 IPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSL 91
+P+ FRC +SL+LM DPV + +G T++R I+KWI+ G CP T Q L+ L PN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSE 124
R + WC N+ Y P PL SE
Sbjct: 300 RAFLASWCETNNVY-------PPDPLELIHSSE 325
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 31 VIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHS 90
+P F+C +S +M DPV + +G T++R I+KW + GN CP++ + L F L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 91 LRRMIQDWCVKN 102
L+ I +WC KN
Sbjct: 278 LKSQISEWCAKN 289
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P +F CP+SL++MKDP G TY+ +I W++ G++ P+TN L L+PN +LR
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 93 RMIQDWCVKNSSY 105
IQ+W +SS+
Sbjct: 386 SAIQEWLHASSSF 398
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 11 LRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGN 70
L++V +N + P + P+HF CP+ D+MK+P G TYDR +IE+W+E +
Sbjct: 731 LKKVADKARNSLSAAPSQP---PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NH 786
Query: 71 KKCPVTNQILTTFDLIPNHSLRRMIQDWCVKN 102
+ PVTN L +L+PNH+L I +W +N
Sbjct: 787 RTSPVTNSPLQNVNLLPNHTLYAAIVEWRNRN 818
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P H+ CP+ ++M+DP G TY+R +I++WI+ PVT L DL PNH+LR
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 93 RMIQDW 98
I++W
Sbjct: 769 SAIREW 774
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 10 VLRRVRKGKQNQVPDLPVEEIV-------IPNHFRCPVSLDLMKDPVTLPTGITYDRTSI 62
VLR + + K +VP P+H+ CP+ ++MKDP+ G TY+ +I
Sbjct: 696 VLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYEAEAI 755
Query: 63 EKWIEAGNKKCPVTNQILTTFDLIPNHSLRRMIQDW 98
+W+ G+ P+TN + +LIPNH+L IQDW
Sbjct: 756 REWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDW 791
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 10 VLRRVRKGKQNQVPDLPVEEIV-------IPNHFRCPVSLDLMKDPVTLPTGITYDRTSI 62
VLR + + K +VP P+H+ CP+ ++MKDP+ G TY+ +I
Sbjct: 706 VLRFIDRMKAPEVPSSETSSYANQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYEAEAI 765
Query: 63 EKWIEAGNKKCPVTNQILTTFDLIPNHSLRRMIQDW 98
+W+ G+ P+TN + +LIPNH+L IQDW
Sbjct: 766 REWLANGHDTSPMTNLKMEDCNLIPNHALHLAIQDW 801
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 11 LRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGN 70
LR+V ++++P+ + + +P F C +S +M +PV + +G TY++ I +W++
Sbjct: 55 LRKV----ESKIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HE 109
Query: 71 KKCPVTNQILTTFDLIPNHSLRRMIQDWCVKNSSYGIERIPTPR--APLNPFEVSEVCSR 128
+ CP T Q+L+ IPNH + +I WC+ N Y ++ P+ A L ++ + R
Sbjct: 110 RTCPKTKQVLSHRLWIPNHLISDLITQWCLVN-KYDHQK-PSDELVAELFTSDIEALLQR 167
Query: 129 LLSASQRGDGIRCVEFVGKIKGWGREGERNRKCVIENGAGVVLATVFDSFARV------- 181
+ S+S D I + + R++ N +A + DS R+
Sbjct: 168 VSSSSSVADQIEAAKEL-----------RHQTKKFPNVRVFFVAGIHDSITRLLSPLSTL 216
Query: 182 --SVQNHVGVLEEILEVLTWMIPFGEEGRLKLSSEASVNCMVWFLGGQDLG-----ARKN 234
+V + + + E I+ L + + E + ++ NC+V L + L R+N
Sbjct: 217 DEAVDSSLELQENIVTAL-FNLSILESNKTVIAE----NCLVIPLLTKSLKQGTDETRRN 271
Query: 235 AARLLKEVPA----EILVETEGIADGLIEIVKDSIGSNSTKACLATIFNL 280
AA L + A +I++ LI+++++ +TK +T+FNL
Sbjct: 272 AAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEG-DLLATKEATSTVFNL 320
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 32 IPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSL 91
IP+ F CP+ ++MK+P G +Y+ +I++W+ G+ P+TN L L PNH+L
Sbjct: 715 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 774
Query: 92 RRMIQDWCVKNSS 104
R +IQDW K ++
Sbjct: 775 RSLIQDWHSKRAA 787
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P +F CP++ D+M+DP G TY+ +I +W E G++ P+ N+ L L+PN +LR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 93 RMIQDW 98
IQ+W
Sbjct: 414 SAIQEW 419
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P+H+ CP+ ++M++P G TY+R +I W+E N PVT Q L F L PNH+LR
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHN-ISPVTRQKLDHFKLTPNHTLR 784
Query: 93 RMIQDW 98
I+DW
Sbjct: 785 SAIRDW 790
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P+ F CP++ ++MKDP G TY+ SI KW+ G++ P+TN L+ L+PN +LR
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 478
Query: 93 RMIQD 97
I++
Sbjct: 479 SAIEE 483
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 6 TRRNVLRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKW 65
T +LR + KG ++ +P I P F CP+S D+M++P G TY+ +W
Sbjct: 269 TTEELLRALEKG-ESSIPLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRW 327
Query: 66 IEAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKN 102
+ G +K P+TN L +LIPN LR I+DW ++
Sbjct: 328 LNHGGEKSPMTNLRLENRNLIPNLVLRSAIKDWLQQH 364
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P HF CP++ D+M++P G TY++ +I++W++ N K P+T+ + L+PNHSL
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 784
Query: 93 RMIQDW 98
I++W
Sbjct: 785 SAIKEW 790
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P HF CP++ D+M++P G TY++ +I++W++ N K P+T+ + L+PNHSL
Sbjct: 724 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 782
Query: 93 RMIQDW 98
I++W
Sbjct: 783 SAIKEW 788
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 28 EEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIP 87
E + P +F CP+ ++M+DP G TY+ +I W+++ + P+TN L+ LI
Sbjct: 759 EHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIA 818
Query: 88 NHSLRRMIQDW 98
NH+LR IQ+W
Sbjct: 819 NHALRSAIQEW 829
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 36 FRCPVSLDLMKDPVTLPTGITYDRTSIEKWI----EAGN-KKCPVTNQILTTFDLIPNHS 90
F CP++ ++M DPVTL G T++R +IEKW ++G CP+T+Q LT+ D+ + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 91 LRRMIQDWCVKNSSYGIERIPTPRAPLNPFEVSEVCSRLLSASQRGDGIRCVEFVGKIKG 150
LR I++W +N + ++ I L E +++ L+ Q IR
Sbjct: 87 LRNTIEEWRSRNDAAKLD-IARQSLFLGNAE-TDILQALMHVRQICRTIRS--------- 135
Query: 151 WGREGERNRKCVIENGAGVVLATVFDSFARVSVQNHVGVLEEILEVLTWMIPFGEEGRLK 210
R G RN + ++ + D S + V + L+ L ++ +E +
Sbjct: 136 -NRHGVRNSQ---------LIHMIIDMLKSTSHR----VRYKALQTLQVVVEGDDESKAI 181
Query: 211 LSSEASVNCMVWFLGGQDLGARKNAARLLKEVP-AEILVETEGIADGLIEIVKDSIGSNS 269
++ +V +V FL + R+ A LL E+ +E L E G G + ++ SNS
Sbjct: 182 VAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNS 241
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 33 PNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLR 92
P HF CP+ D+M +P G TYDR +IE+W++ N P+T+ L + +L+PN++L
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN-TSPMTDSPLHSKNLLPNYTLY 825
Query: 93 RMIQDW 98
I +W
Sbjct: 826 TAIMEW 831
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 36 FRCPVSLDLMKDPVTLPTGITYDRTSIEKWI----EAGNK-KCPVTNQILTTFDLIPNHS 90
F CP++ +M +PVTL G T++R +IEKW E G CP+T++ L+ DL P+ +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 91 LRRMIQDWCVKNSSYGIE 108
LR I++W +N + ++
Sbjct: 89 LRNTIEEWRARNDALKLD 106
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 36 FRCPVSLDLMKDPVTLPTGITYDRTSIEKWI----EAGNK-KCPVTNQILTTFDLIPNHS 90
F CP++ +M +PVTL G T++R +IEKW E G CP+T++ L+ DL P+ +
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 91 LRRMIQDWCVKNSSYGIE 108
LR I++W +N + ++
Sbjct: 89 LRNTIEEWRARNDALKLD 106
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 148/354 (41%), Gaps = 59/354 (16%)
Query: 19 QNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQ 78
+++ P+ + + +P F C +S +M +P+ + +G T++++ I +W++ + CP T Q
Sbjct: 52 ESKNPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQ 110
Query: 79 ILTTFDLIPNHSLRRMIQDWCVKNSSYGIERIPTPRAPLNPF--EVSEVCSRLLSASQRG 136
+L +IPNH + +I++WC+ + +R T ++ F ++ + R+ S S
Sbjct: 111 VLYHRFMIPNHLINEVIKEWCL---IHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVE 167
Query: 137 DGIR---------------CVEFVGKIKGWGRE-------GERNRKCVIENGAGVVLATV 174
D CV FV KI E + +EN + T
Sbjct: 168 DQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLEN-----IVTA 222
Query: 175 FDSFARVSVQNHVGVLEEILEVLTWMIPFGEEGRL--KLSSEASVNCMVW------FLG- 225
F+ S +N V E L VL + + ++G + ++ S A+VN + + +G
Sbjct: 223 LHIFS-TSEKNKTLVAENPL-VLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGN 280
Query: 226 -------------GQDLGARKNAARLLKEVPAEILVETEGIADGLIEIVKDSIGSNSTKA 272
G L + + L P + + E + +++GLI I + S +
Sbjct: 281 SEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISE-KAVSEGLIRAAIKKIKAGSNVS 339
Query: 273 CLATIFNLVSHKEGIAVAERFVELGLVSLLLEIIVDCADKGTCEKALGVLDCIC 326
L ++ VS + E LGL+ L I+ + E A+ ++ IC
Sbjct: 340 MLLSLLAFVS-TQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNIC 392
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 36 FRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEA-GNK---KCPVTNQILTTFDLIPNHSL 91
F CP++ ++M+DPVT TG+T +R ++ +W ++ GN CPVT Q LTT +L N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT-ELSANVVL 308
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLN 118
+ +IQ+W V+N + RI A L+
Sbjct: 309 KTIIQEWKVRNEA---ARIKVAHAALS 332
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 36 FRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEA-GNK---KCPVTNQILTTFDLIPNHSL 91
F CP++ ++M+DPVT TG+T +R ++ +W ++ GN CPVT Q LTT +L N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT-ELSANVVL 308
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLN 118
+ +IQ+W V+N + RI A L+
Sbjct: 309 KTIIQEWKVRNEA---ARIKVAHAALS 332
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 36 FRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEA-GNK---KCPVTNQILTTFDLIPNHSL 91
F CP++ ++M+DPVT TG+T +R ++ +W ++ GN CPVT Q LTT +L N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT-ELSANVVL 308
Query: 92 RRMIQDWCVKNSSYGIERIPTPRAPLN 118
+ +IQ+W V+N + RI A L+
Sbjct: 309 KTIIQEWKVRNEA---ARIKVAHAALS 332
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 9 NVLRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIEA 68
N L+ V K+ + D + +P F+C +S +M DPV + +G TY++ I +W+
Sbjct: 53 NRLKIVESKKRKRESD--SSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN- 109
Query: 69 GNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKN 102
+ CP Q+L L PNH + +I WC+ N
Sbjct: 110 HDLTCPTAKQVLYRVCLTPNHLINELITRWCLAN 143
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 11 LRRVRKGKQN---QVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIE 67
LR+V QN + P P P+HF CP+ +M +P G TYDR +IE+W+
Sbjct: 757 LRKVADKAQNLLSRTPSGP------PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLR 810
Query: 68 AGNKKCPVTNQILTTFDLIPNHSLRRMIQDW 98
+ PVTN L +LI N++L I +W
Sbjct: 811 QKD-TSPVTNLPLPNKNLIANYTLYSAIMEW 840
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 11 LRRVRKGKQN---QVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWIE 67
LR+V QN + P P P+HF CP+ +M +P G TYDR +IE+W+
Sbjct: 757 LRKVADKAQNLLSRTPSGP------PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLR 810
Query: 68 AGNKKCPVTNQILTTFDLIPNHSLRRMIQDW 98
+ PVTN L +LI N++L I +W
Sbjct: 811 QKD-TSPVTNLPLPNKNLIANYTLYSAIMEW 840
>AT1G56030.1 | Symbols: | RING/U-box superfamily protein |
chr1:20957098-20958550 REVERSE LENGTH=371
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 43 DLMKDPVTLPTGITYDRTSIEKWIEAGNKKCPVTNQILTTFDLIPNHSLRRMIQD 97
D+MK+P G TY+ +I+KWI G++ P+TN L+ F PN +LR I++
Sbjct: 314 DVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALRSAIEE 368
>AT3G07370.1 | Symbols: ATCHIP, CHIP | carboxyl terminus of
HSC70-interacting protein | chr3:2358323-2360301 REVERSE
LENGTH=278
Length = 278
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 7 RRNVLRRVRKGKQNQVPDLPVEEIVIPNHFRCPVSLDLMKDPVTLPTGITYDRTSIEKWI 66
R L RV K + D P E +P++ C ++L++ +DPV P+G+TY+R +I + +
Sbjct: 180 RLKALERVFKKAAEE--DKPTE---VPDYLCCNITLEIFRDPVISPSGVTYERAAILEHL 234
Query: 67 EAGNKKCPVTNQILTTFDLIPNHSLRRMIQDWCVKN 102
+ K P+T + + +L+PN +++ + + K+
Sbjct: 235 KKVGKFDPITREKIDPANLVPNLAIKEAVAAYLEKH 270