Miyakogusa Predicted Gene

Lj6g3v0405290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0405290.1 Non Chatacterized Hit- tr|F6HI02|F6HI02_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,36.05,7e-18,no
description,Armadillo-like helical; IMPORTIN-5 (IMPORTIN SUBUNIT
BETA-3),NULL; IMPORTIN BETA,NULL,gene.g64131.t1.1
         (431 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19820.1 | Symbols: emb2734 | ARM repeat superfamily protein ...   147   1e-35

>AT5G19820.1 | Symbols: emb2734 | ARM repeat superfamily protein |
            chr5:6695731-6701247 REVERSE LENGTH=1116
          Length = 1116

 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 110/162 (67%), Gaps = 1/162 (0%)

Query: 261  GIRIYAELGTPKLKPYIHRLISELIMLIKDPNRPVSENSKAQDIAVSAIGRICEFHRECI 320
            G+ + AE G    KP I   +S L ++I+ PN   SEN+ A D AVSA+G+IC+FHR+ I
Sbjct: 947  GLGVCAEFGGSVFKPLIGEALSRLNVVIQLPNARQSENAMAYDNAVSAVGKICQFHRDSI 1006

Query: 321  DGSQLVPAWLSFLPLKNDLIEAKLMHEQLSLMVSRFDKDLFGPANQNLEKIITVFIQVIE 380
            D SQ++PAWL+ LP+ ND++EAK++H+QL  MV R D DL GP NQ+L KI+ VF +V+ 
Sbjct: 1007 DSSQVLPAWLNCLPISNDVLEAKVVHDQLCSMVERQDVDLLGPNNQHLPKILIVFAEVL- 1065

Query: 381  EGGNLATPETINQMNDLLTELARHIPQSALDSILVSLSAQQR 422
             G ++ T ET  +M ++L +L + +P SAL S   +L  +Q+
Sbjct: 1066 TGKDVVTQETAGRMINILRQLQQTLPPSALASTWSTLKPEQQ 1107



 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 12/269 (4%)

Query: 1   MVSREPILLRPYMCDMVLDALQIAES-GVARGTRRLVIGMVVSMAEVRECE--MV--LPS 55
           +   EP  LR  + D+V   LQIAE+  +   TR L I  +V++AE RE    MV  LP 
Sbjct: 259 LAGTEPRFLRRQLVDIVGSMLQIAEADSLEESTRHLAIEFLVTLAEARERAPGMVRKLPQ 318

Query: 56  LLDQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKGLEKVCAAVGGIRTVA 115
            +D+                                       + L+++  ++GG   V 
Sbjct: 319 FIDRLFAVLMKMLEDIEDDPAWYSAETEDEDAGETSNYSMGQ-ECLDRLAISLGGNTIVP 377

Query: 116 VVRELLPPYLDAAEWKERHAGIEILGVIAKLFSDEMVMMENFLEEVVNRVLKVLQDPQVQ 175
           V  +    YL A+EW++ HA +  L  IA+  S   VM++N L++VV+ VL   Q P  +
Sbjct: 378 VAYQQFSAYLAASEWQKHHASLIALAQIAEGCSK--VMIKN-LDQVVSMVLSQFQSPHPR 434

Query: 176 VRLAAFNLM-QMPTNFAQALQILYAQRFGHAFSIALVHEEESNVKEEAAIAMLFFLKNTL 234
           VR AA N + Q+ T+    LQ  + +R   A + A+   +   V+  AA A+L F +N  
Sbjct: 435 VRWAAINAIGQLSTDLGPDLQNQHHERVLPALAAAMDDFQNPRVQAHAASAVLNFSENCT 494

Query: 235 PESLTLFKSADTAMANLLSLIKEGARGIR 263
           PE L+ +   D  ++ LL L++ G + ++
Sbjct: 495 PEILSPY--LDGVVSKLLVLLQNGKQMVQ 521