Miyakogusa Predicted Gene
- Lj6g3v0366930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0366930.1 Non Chatacterized Hit- tr|I1MZJ1|I1MZJ1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.3,0,FAD-linked
reductases, C-terminal domain,NULL; FAD/NAD(P)-binding domain,NULL;
Amino_oxidase,Amine o,CUFF.57751.1
(270 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G65840.1 | Symbols: ATPAO4, PAO4 | polyamine oxidase 4 | chr1... 408 e-114
AT2G43020.1 | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 | chr2... 352 2e-97
AT3G59050.1 | Symbols: ATPAO3, PAO3 | polyamine oxidase 3 | chr3... 344 3e-95
AT4G16310.1 | Symbols: LDL3 | LSD1-like 3 | chr4:9218636-9224764... 162 2e-40
AT1G62830.1 | Symbols: LDL1, SWP1, ATSWP1, ATLSD1, LSD1 | LSD1-l... 124 7e-29
AT3G13682.1 | Symbols: LDL2 | LSD1-like2 | chr3:4479193-4481509 ... 120 8e-28
AT3G10390.1 | Symbols: FLD | Flavin containing amine oxidoreduct... 119 3e-27
AT5G13700.1 | Symbols: ATPAO1, APAO, PAO1 | polyamine oxidase 1 ... 101 5e-22
AT4G29720.1 | Symbols: ATPAO5, PAO5 | polyamine oxidase 5 | chr4... 99 4e-21
>AT1G65840.1 | Symbols: ATPAO4, PAO4 | polyamine oxidase 4 |
chr1:24490173-24492728 FORWARD LENGTH=497
Length = 497
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 193/274 (70%), Positives = 231/274 (84%), Gaps = 4/274 (1%)
Query: 1 MVQGYDPVIKALAKDVDIRLNHRVTKI-SSGYNKVMVTVEDGRNFIADAAIITVPLGVLK 59
MVQGY+PVI+ +AKD+DIRLNHRVTK+ + NKV+V VE G NF+ADA IITVP+GVLK
Sbjct: 224 MVQGYEPVIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLK 283
Query: 60 ANIIEFEPKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYFLNL 119
AN+I+FEP+LP WK SAIS LGVGNENK+ALRFD+ FWPNVE LG+VAPTSYACGYFLNL
Sbjct: 284 ANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNL 343
Query: 120 HKATGHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMFPDASEPVQYLVSHWGTDPN 179
HKATGHPVLVYMAAG A DLEKLSDEA ANFVML LKKMFPDA +P QYLV+ WGTDPN
Sbjct: 344 HKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPN 403
Query: 180 SLGCYSYDLVGKPHDVYDKLRAPLGNLFFGGEAVSLENQGSVHGAYSAGVMAAENCQRFI 239
+LGCY+YD+VG P D+Y +L P+ N+FFGGEAV++E+QGS HGA+ AGV A++NCQR+I
Sbjct: 404 TLGCYAYDVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRYI 463
Query: 240 SEQQGHMESVPLSSV--SHSILES-TIPIQISRM 270
E+ G E + L S+ + ILE+ T+P+QISRM
Sbjct: 464 FERLGAWEKLKLVSLMGNSDILETATVPLQISRM 497
>AT2G43020.1 | Symbols: ATPAO2, PAO2 | polyamine oxidase 2 |
chr2:17891945-17894440 FORWARD LENGTH=490
Length = 490
Score = 352 bits (903), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 168/270 (62%), Positives = 207/270 (76%), Gaps = 2/270 (0%)
Query: 1 MVQGYDPVIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKA 60
MV+GY PVI LAK +DIR+ HRVTKI YN V VT E+G+ F+ADAA+I VPLGVLK+
Sbjct: 223 MVRGYRPVINTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKS 282
Query: 61 NIIEFEPKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYFLNLH 120
I+FEPKLP+WK AI+DLGVG ENK+ L F+KVFWP VE LGVVA TSY C YFLNLH
Sbjct: 283 GTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNLH 342
Query: 121 KATGHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMFPDASEPVQYLVSHWGTDPNS 180
KATGHPVLVYM AG+ A D+EK+SDEAAANF +L L+++ PDA PVQYLVS WG+D NS
Sbjct: 343 KATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVNS 402
Query: 181 LGCYSYDLVGKPHDVYDKLRAPLGNLFFGGEAVSLENQGSVHGAYSAGVMAAENCQRFIS 240
+G YSYD+VGKPHD+Y++LR P+ NLFF GEA S GSVHGAYS G+MAAE+C+ +
Sbjct: 403 MGSYSYDIVGKPHDLYERLRVPVDNLFFAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVL 462
Query: 241 EQQGHMESVPLSSVSHSILESTIPIQISRM 270
E+ G ++ V +++P+ ISR+
Sbjct: 463 ERYGELDL--FQPVMGEEGPASVPLLISRL 490
>AT3G59050.1 | Symbols: ATPAO3, PAO3 | polyamine oxidase 3 |
chr3:21824932-21827173 REVERSE LENGTH=488
Length = 488
Score = 344 bits (883), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 167/270 (61%), Positives = 200/270 (74%), Gaps = 5/270 (1%)
Query: 1 MVQGYDPVIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKA 60
MV+GY PVI L+K +DIRL+HR+TKIS Y+ V VT E G F+ADAA+I +PLGVLK+
Sbjct: 224 MVRGYRPVINTLSKGLDIRLSHRITKISRRYSGVKVTTEKGDTFVADAAVIALPLGVLKS 283
Query: 61 NIIEFEPKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYFLNLH 120
+I FEPKLP WK AI+DLGVG ENK+ L FD VFWPNVE LGVVA TSY C YFLNLH
Sbjct: 284 GMITFEPKLPQWKQEAINDLGVGIENKIILNFDNVFWPNVEFLGVVAETSYGCSYFLNLH 343
Query: 121 KATGHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMFPDASEPVQYLVSHWGTDPNS 180
KAT HPVLVYM AG+ A D+EK SDEAAANF L+K+ PDAS P+ YLVS WG+D NS
Sbjct: 344 KATSHPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSDINS 403
Query: 181 LGCYSYDLVGKPHDVYDKLRAPLGNLFFGGEAVSLENQGSVHGAYSAGVMAAENCQRFIS 240
LG YSYD+V KPHD+Y++LR PL NLFF GEA S GSVHGAYS GV+AAE+C+ +
Sbjct: 404 LGSYSYDIVNKPHDLYERLRVPLDNLFFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVL 463
Query: 241 EQQGHMESVPLSSVSHSILESTIPIQISRM 270
E+ G +E +++P+ ISRM
Sbjct: 464 ERYGELEHEMEEEAP-----ASVPLLISRM 488
>AT4G16310.1 | Symbols: LDL3 | LSD1-like 3 | chr4:9218636-9224764
FORWARD LENGTH=1628
Length = 1628
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 135/248 (54%), Gaps = 22/248 (8%)
Query: 4 GYDPVIKALAKDVDIRLNHRVTKIS---------SGYNKVMVTVEDGRNFIADAAIITVP 54
GY V+++LA+ +DI LN V+ +S + +KV V+ +G ++ DA ++TVP
Sbjct: 854 GYSRVVESLAEGLDIHLNKIVSDVSYVSDVSAMDNSKHKVRVSTSNGCEYLGDAVLVTVP 913
Query: 55 LGVLKANIIEFEPKLPDWKVSAISDLGVGNENKVALRFDKVFWPN-VELLGVVAPTSY-- 111
LG LKA I+F P LPDWK ++I LG G NKV L F VFW + V+ G A +
Sbjct: 914 LGCLKAETIKFSPPLPDWKYASIKQLGFGVLNKVVLEFPTVFWDDSVDYFGATAEETDLR 973
Query: 112 -ACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMF-----PDASE 165
C F N+ K G PVL+ + G+ A++ S N M+ L+K+F PD
Sbjct: 974 GECFMFWNVKKTVGAPVLIALVVGKAAFEYTNKSKSEHVNHAMMVLRKLFGGDLVPD--- 1030
Query: 166 PVQYLVSHWGTDPNSLGCYSYDLVGKPHDVYDKLRAPLGN-LFFGGEAVSLENQGSVHGA 224
PV +V+ WGTDP S G YSY +G + YD L P+ N LFF GEA E+ +V GA
Sbjct: 1031 PVASVVTDWGTDPYSYGAYSYVAIGASGEDYDVLGRPVQNCLFFAGEATCKEHPDTVGGA 1090
Query: 225 YSAGVMAA 232
GV A
Sbjct: 1091 MMTGVREA 1098
>AT1G62830.1 | Symbols: LDL1, SWP1, ATSWP1, ATLSD1, LSD1 | LSD1-like
1 | chr1:23264638-23267172 REVERSE LENGTH=844
Length = 844
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 4 GYDPVIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANII 63
G + + ALA+++ I V I G N V+V + + F D A+ TVPLGVLK I
Sbjct: 463 GNEIFVHALAENLPIFYGSTVESIRYGSNGVLVYTGN-KEFHCDMALCTVPLGVLKKGSI 521
Query: 64 EFEPKLPDWKVSAISDLGVGNENKVALRFDKVFW-PNVELLGVVAPTSYACGYFLNLH-- 120
EF P+LP K AI LG G NKVA+ F FW ++ G + G F +
Sbjct: 522 EFYPELPHKKKEAIQRLGFGLLNKVAMLFPCNFWGEEIDTFGRLTEDPSTRGEFFLFYSY 581
Query: 121 -KATGHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMF-------PDASEPVQYLVS 172
+G P+LV + AG A E LS + V+ L+ ++ PD PVQ L S
Sbjct: 582 SSVSGGPLLVALVAGDAAERFETLSPTDSVKRVLQILRGIYHPKGIVVPD---PVQALCS 638
Query: 173 HWGTDPNSLGCYSYDLVGKPHDVYDKLRAPLGN--LFFGGEAVSLENQGSVHGAYSAGVM 230
WG D S G YSY VG D YD L +G+ +FF GEA + + ++HGA+ +G+
Sbjct: 639 RWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNRQYPATMHGAFLSGMR 698
Query: 231 AAENCQR 237
A N R
Sbjct: 699 EAANILR 705
>AT3G13682.1 | Symbols: LDL2 | LSD1-like2 | chr3:4479193-4481509
REVERSE LENGTH=746
Length = 746
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 121/237 (51%), Gaps = 16/237 (6%)
Query: 8 VIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFEP 67
+I ALA+ + I V I G V V + + F AD + TVPLGVLK I+FEP
Sbjct: 358 LINALAEGLPIIYGKSVDTIKYGDGGVEV-ISGSQIFQADMILCTVPLGVLKKRSIKFEP 416
Query: 68 KLPDWKVSAISDLGVGNENKVALRFDKVFWPN-VELLGVVAPTSYACGYFLNL---HKAT 123
+LP K +AI LG G NKVA+ F VFW + ++ G + +S G F H +
Sbjct: 417 ELPRRKQAAIDRLGFGLLNKVAMLFPSVFWGDELDTFGCLNESSINRGEFFLFYAYHTVS 476
Query: 124 GHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMF-------PDASEPVQYLVSHWGT 176
G P LV + AG A E + V+ L+ ++ PD P+Q + + WG+
Sbjct: 477 GGPALVALVAGEAAQRFECTEPSVLLHRVLKKLRGIYGPKGVVVPD---PIQTVCTRWGS 533
Query: 177 DPNSLGCYSYDLVGKPHDVYDKLRAPLGN-LFFGGEAVSLENQGSVHGAYSAGVMAA 232
DP S G YS+ VG YD L + N LFF GEA + ++ ++HGAY +G+ A
Sbjct: 534 DPLSYGSYSHVRVGSSGVDYDILAESVSNRLFFAGEATTRQHPATMHGAYLSGLREA 590
>AT3G10390.1 | Symbols: FLD | Flavin containing amine oxidoreductase
family protein | chr3:3229293-3232345 FORWARD LENGTH=884
Length = 884
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 124/241 (51%), Gaps = 11/241 (4%)
Query: 4 GYDPVIKALAKDVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANII 63
G +++ALA++V I V I G N V VT + + + D + TVPLGVLK I
Sbjct: 379 GNGRLVQALAENVPILYEKTVQTIRYGSNGVKVTAGN-QVYEGDMVLCTVPLGVLKNGSI 437
Query: 64 EFEPKLPDWKVSAISDLGVGNENKVALRFDKVFW-PNVELLG-VVAPTSYACGYFLNLHK 121
+F P+LP K+ I LG G NKVA+ F VFW +++ G + +Y +FL
Sbjct: 438 KFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVFWSTDLDTFGHLTEDPNYRGEFFLFYSY 497
Query: 122 A--TGHPVLVYMAAGRFAYDLEKLSDEAAANFVMLHLKKMFP----DASEPVQYLVSHWG 175
A G +L+ + AG A+ E + A V+ L+ ++ + +P+Q + + WG
Sbjct: 498 APVAGGALLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYEPQGINVPDPLQTVCTRWG 557
Query: 176 TDPNSLGCYSYDLVGKPHDVYDKLRAPLGN--LFFGGEAVSLENQGSVHGAYSAGVMAAE 233
DP SLG YS VG D YD L +G+ LFF GEA + ++HGA+ G+ A
Sbjct: 558 GDPFSLGSYSNVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFVTGLREAA 617
Query: 234 N 234
N
Sbjct: 618 N 618
>AT5G13700.1 | Symbols: ATPAO1, APAO, PAO1 | polyamine oxidase 1 |
chr5:4420222-4422974 REVERSE LENGTH=472
Length = 472
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 15 DVDIRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGVLKANIIEFEPKLPDWKV 74
D ++LN V ++ N V+V EDG + A+ I++ +GVL+++++ F+P LP WK
Sbjct: 204 DYRLKLNQVVREVQQSRNGVVVKTEDGSVYEANYVIVSASIGVLQSDLLSFQPLLPRWKT 263
Query: 75 SAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYACGYF-LNLHKATGHP---VLVY 130
AI V K+ L+F + FWP GYF H +P +LV
Sbjct: 264 EAIQKCDVMVYTKIFLKFPQCFWPCGPGQEFFIYAHEQRGYFTFWQHMENAYPGSNILVV 323
Query: 131 MAAGRFAYDLEKLSDEAAANFVMLHLKKMFPDASEP--VQYLVSHWGTDPNSLGCYSYDL 188
+ +E SD+ M L+ MF A+ P LV W + G YS
Sbjct: 324 TLTNEQSKRVEAQSDQETMKEAMSVLRDMF-GATIPYATDILVPRWWNNRFQRGSYSNYP 382
Query: 189 VGKPHDVYDKLRAPLGNLFFGGEAVSLENQGSVHGAYSAGVMAAENCQRFISEQQGHMES 248
+ + + ++AP+G +FF GE S + G VHG Y AG+ + + + E + +
Sbjct: 383 MISDNQLLQNIKAPVGRIFFTGEHTSEKFSGYVHGGYLAGI---DTSKSLLEEMKQSLLL 439
Query: 249 VPLSSVSHSI 258
PL + + S+
Sbjct: 440 QPLLAFTESL 449
>AT4G29720.1 | Symbols: ATPAO5, PAO5 | polyamine oxidase 5 |
chr4:14553456-14555057 REVERSE LENGTH=533
Length = 533
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 130/290 (44%), Gaps = 61/290 (21%)
Query: 1 MVQGYDPVIKALAKDVD---IRLNHRVTKISSGYNKVMVTVEDGRNFIADAAIITVPLGV 57
+ +GY VI LA + I+LN +VTKI N+V + DG AD I+TV LGV
Sbjct: 236 IAKGYLSVIHHLASVLPQGVIQLNRKVTKIEWQSNEVKLHFSDGSVVFADHVIVTVSLGV 295
Query: 58 LKANIIE----FEPKLPDWKVSAISDLGVGNENKVALRFDKVFWPNVELLGVVAPTSYAC 113
LKA I F P LPD+K AI LG G NK+ + + +P+++L+ + +
Sbjct: 296 LKAGIETDAELFSPPLPDFKSDAIRRLGYGVVNKLFVEMSQRKFPSLQLVFDREDSEF-- 353
Query: 114 GYFLNL-----HKATGHP------VLVYMAAGRFAYDLEKLSDEAAANFVMLHL-----K 157
F+ + AT P VL+ AG+ A +LEKL+DE + VM + K
Sbjct: 354 -RFVKIPWWMRRTATITPIHSNSKVLLSWFAGKEALELEKLTDEEIKDAVMTTISCLTGK 412
Query: 158 KMFPDASEPV---------------QYLVSHWGTDPNSLGCYSYDLVGKPHDVYDKLRAP 202
++ D ++P+ + L S WG+DP G YSY VG D D + P
Sbjct: 413 EVKNDTAKPLTNGSLNDDDEAMKITKVLKSKWGSDPLFRGSYSYVAVGSSGDDLDAMAEP 472
Query: 203 LGNL--------------------FFGGEAVSLENQGSVHGAYSAGVMAA 232
L + F GEA + + HGAY +G+ A
Sbjct: 473 LPKINKKVGQVNGHDQAKVHELQVMFAGEATHRTHYSTTHGAYYSGLREA 522