Miyakogusa Predicted Gene

Lj6g3v0365870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0365870.1 Non Chatacterized Hit- tr|K3YW08|K3YW08_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018454,35.22,5e-19,A_tha_TIGR01569: plant integral membrane
protein T,Uncharacterised protein family UPF0497,
trans-mem,CUFF.57734.1
         (213 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17200.1 | Symbols:  | Uncharacterised protein family (UPF049...   211   4e-55
AT3G14380.1 | Symbols:  | Uncharacterised protein family (UPF049...   144   5e-35
AT1G17200.2 | Symbols:  | Uncharacterised protein family (UPF049...   130   6e-31
AT5G54980.1 | Symbols:  | Uncharacterised protein family (UPF049...    99   2e-21
AT4G16442.1 | Symbols:  | Uncharacterised protein family (UPF049...    75   3e-14
AT2G35760.1 | Symbols:  | Uncharacterised protein family (UPF049...    69   3e-12
AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF049...    65   5e-11
AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF049...    63   2e-10
AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF049...    62   4e-10
AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF049...    58   5e-09
AT4G25830.1 | Symbols:  | Uncharacterised protein family (UPF049...    55   4e-08
AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF049...    54   6e-08
AT4G15620.1 | Symbols:  | Uncharacterised protein family (UPF049...    54   1e-07
AT5G06200.1 | Symbols:  | Uncharacterised protein family (UPF049...    49   2e-06
AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF049...    49   2e-06
AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF049...    48   6e-06

>AT1G17200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:5878493-5879871 FORWARD LENGTH=204
          Length = 204

 Score =  211 bits (536), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 97/156 (62%), Positives = 123/156 (78%)

Query: 36  LRSLETFLRLLPIGLCVSALVLMLKNSQENDYGSVDYTDLGPFRYLVHANGICAGYSLLS 95
           +R+ ET LRL P+GLCV+ALV+MLK+S+ N++GS+ Y++L  FRYLVHANGICAGYSLLS
Sbjct: 30  IRTAETMLRLAPVGLCVAALVVMLKDSETNEFGSISYSNLTAFRYLVHANGICAGYSLLS 89

Query: 96  AVFVAVPRPSPTMSRAWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTTWSSACGSF 155
           A   A+PR S TM R WTFF LDQ+LTY++L AGA S EVLYL   GD+  TWS AC S+
Sbjct: 90  AAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSY 149

Query: 156 GRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKY 191
           G FC++ TA+  ITF  V  Y++LS+ISSYKLFT++
Sbjct: 150 GGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRF 185


>AT3G14380.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:4803175-4803799 REVERSE LENGTH=178
          Length = 178

 Score =  144 bits (363), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 78/158 (49%), Positives = 108/158 (68%), Gaps = 2/158 (1%)

Query: 35  TLRSLETFLRLLPIGLCVSALVLMLKNSQENDYGSVDYTDLGPFRYLVHANGICAGYSLL 94
           T +S E  LR+  + L ++ LV+M+KNS  N++GSV Y+++G F YLV ANG+CA YSLL
Sbjct: 19  TEKSAEAVLRVASMALSITGLVIMIKNSISNEFGSVSYSNIGAFMYLVSANGVCAAYSLL 78

Query: 95  SAVFVAVPRPSP-TMSRAWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTTWSSACG 153
           SA+   +  P P +  +  T FLLDQV+TY++L AGA S E +YL   G+   TWSSAC 
Sbjct: 79  SAL-AILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACD 137

Query: 154 SFGRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKY 191
           S+G FC+    +   TFV  L Y+LLS+ISSY+LFT++
Sbjct: 138 SYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRF 175


>AT1G17200.2 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:5878668-5879871 FORWARD LENGTH=135
          Length = 135

 Score =  130 bits (327), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 62/102 (60%), Positives = 76/102 (74%)

Query: 90  GYSLLSAVFVAVPRPSPTMSRAWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTTWS 149
           GYSLLSA   A+PR S TM R WTFF LDQ+LTY++L AGA S EVLYL   GD+  TWS
Sbjct: 15  GYSLLSAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWS 74

Query: 150 SACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKY 191
            AC S+G FC++ TA+  ITF  V  Y++LS+ISSYKLFT++
Sbjct: 75  DACSSYGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRF 116


>AT5G54980.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:22315799-22316560 FORWARD LENGTH=194
          Length = 194

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 97/159 (61%), Gaps = 4/159 (2%)

Query: 35  TLRSLETFLRLLPIGLCVSALVLMLKNSQEN-DYGSVDYTDLGPFRYLVHANGICAGYSL 93
           +L+ +++ LRL  + L V+ + L + N + N DYG+++Y  +   +Y+V  + I A Y+L
Sbjct: 28  SLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIYAL 87

Query: 94  LSAVFVAVPRPSPTMSRAWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTTWSSACG 153
           LS V   V   +  +S+AW FF+ DQVL Y++  + A +TE++YL+ KGD   TWS  C 
Sbjct: 88  LSTVSSWV---TCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCS 144

Query: 154 SFGRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKYG 192
           S+  +C+KLT    +    +  ++ LS+IS+Y+ F+ + 
Sbjct: 145 SYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFD 183


>AT4G16442.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:9272042-9272970 REVERSE LENGTH=182
          Length = 182

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 8/165 (4%)

Query: 36  LRSLETFLRLLPIGLCVSALVLMLKNSQENDYGSVD----YTDLGPFRYLVHANGICAGY 91
           +R  E  LR       + AL+L++ +++     ++     YTD+    +LV ANGI A Y
Sbjct: 8   MRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVY 67

Query: 92  SLLSAV--FVAVPRPSPTMSR--AWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTT 147
           SLL +V   V   +     S+  AW FF  DQ + Y+ + A AA+ E   +  +G+    
Sbjct: 68  SLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQ 127

Query: 148 WSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKYG 192
           W   C  +G+FCN++    +   +A +  V +S IS++ LF  YG
Sbjct: 128 WMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLYG 172


>AT2G35760.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15032059-15033094 FORWARD LENGTH=201
          Length = 201

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 8/165 (4%)

Query: 36  LRSLETFLRLLPIGLCVSALVLMLKNSQENDY----GSVDYTDLGPFRYLVHANGICAGY 91
           +R  E  LR L   L + A +L+  + Q  +         +TD+     LV  NGI AGY
Sbjct: 27  VRVTELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGY 86

Query: 92  SLLSAV--FVAVPRPSPTMSR--AWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTT 147
           SL+ AV   V + +     S+  AW  F  DQ + Y+ +   AA+ +     + G+    
Sbjct: 87  SLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPELQ 146

Query: 148 WSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKYG 192
           W   C  +G+FCN++    A    A +  VL+S IS++ +F  YG
Sbjct: 147 WMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLYG 191


>AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8917527-8918683 FORWARD LENGTH=190
          Length = 190

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%)

Query: 75  LGPFRYLVHANGICAGYSLLSAVFVAVPRPSPTMSRAWTFFLLDQVLTYIILGAGAASTE 134
           L  F Y + AN I  GY+ +S V V + +   + S      + D ++  ++  +  A+  
Sbjct: 77  LSAFVYNISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGA 136

Query: 135 VLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKL 187
           +  +   G+    W   CG FG+FCN+   + AIT +A + ++LL ++ + KL
Sbjct: 137 IGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189


>AT2G27370.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:11708628-11709905 REVERSE LENGTH=221
          Length = 221

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 71  DYTDLGPFRYLVHANGICAGYSLLSAVF--VAVPRPSPTMSRAWTFFLLDQVLTYIILGA 128
           DYTDL      V  N I  GY  LS  F  V + RP     R +   L D V+  + L A
Sbjct: 100 DYTDLPTMSSFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLF-LILCDTVMMGLTLMA 158

Query: 129 GAASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKL 187
            +AS  ++YL   G++ + W   C  FG FC   +     +F+A    + L I+S++ L
Sbjct: 159 ASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAATLLMFLVILSAFAL 217


>AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:921038-921844 FORWARD LENGTH=164
          Length = 164

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 12/139 (8%)

Query: 54  ALVLMLKNSQENDYGSV----DYTDLGPFRYLVHANGICAGYSLLSAVFVAVPRPSPTMS 109
           A++ M+ + + + +  +     Y+DL  F+Y V AN I   YS L  +F+      P  S
Sbjct: 24  AVIAMITSRERSSFFVISLVAKYSDLAAFKYFVIANAIVTVYSFL-VLFL------PKES 76

Query: 110 RAWTFFL-LDQVLTYIILGAGAASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAI 168
             W F + LD ++T ++  + +A+  V  + ++G+A   W   CG   RFC+++T     
Sbjct: 77  LLWKFVVVLDLMVTMLLTSSLSAAVAVAQVGKRGNANAGWLPICGQVPRFCDQITGALIA 136

Query: 169 TFVAVLCYVLLSIISSYKL 187
             VA++ YV L I S + +
Sbjct: 137 GLVALVLYVFLLIFSIHHV 155


>AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:1570042-1571483 FORWARD LENGTH=164
          Length = 164

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 8/103 (7%)

Query: 71  DYTDLGPFRYLVHANGICAGYSLLSAVFVAVPRPSPTMSRAWTFFL-LDQVLTYIILGAG 129
            YTD+  F+Y V AN + + YS L  +F+      P  S  W F + LD V+T ++  + 
Sbjct: 45  KYTDMAAFKYFVIANAVVSVYSFL-VLFL------PKESLLWKFVVVLDLVMTMLLTSSL 97

Query: 130 AASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAITFVA 172
           +A+  V  + +KG+A   W   CG   +FC+++T      FVA
Sbjct: 98  SAALAVAQVGKKGNANAGWLPICGQVPKFCDQITGALIAGFVA 140


>AT4G25830.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:13133727-13134790 FORWARD LENGTH=175
          Length = 175

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 8/163 (4%)

Query: 36  LRSLETFLRLLPIGLCVSALVLMLKNSQENDYGSVDYTDLGPFRYLV------HANGICA 89
           LR  E  LRL  +   +    L+  +SQ  +   +       FRYL+      + + + A
Sbjct: 4   LRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKN--VSFRYLLALEAELYIDVVVA 61

Query: 90  GYSLLSAVFVAVPRPSPTMSRAWTFFLLDQVLTYIILGAGAASTEVLYLMEKGDAGTTWS 149
            Y+L+            T +  W  +LLDQ   Y++    +A+ +   L+  G     W 
Sbjct: 62  AYNLVQLGLGWYNVEQKTSNPKWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQWM 121

Query: 150 SACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKLFTKYG 192
             C  F RFC ++ +   + ++A    VLLS IS++ LF  Y 
Sbjct: 122 KWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYS 164


>AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:4840798-4841660 REVERSE LENGTH=209
          Length = 209

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%)

Query: 70  VDYTDLGPFRYLVHANGICAGYSLLSAVFVAVPRPSPTMSRAWTFFLL--DQVLTYIILG 127
           V Y+DL    + V AN I  GY +LS + V++     T ++     LL  D V+  ++  
Sbjct: 88  VKYSDLPTLMFFVVANAISGGYLVLS-LPVSIFHIFSTQAKTSRIILLVVDTVMLALVSS 146

Query: 128 AGAASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKL 187
             +A+T  +YL  +G+    W   C  F  FC +++ +   +F AV+  +L+ I S+  L
Sbjct: 147 GASAATATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAVILLMLIVINSAISL 206


>AT4G15620.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8913935-8915531 FORWARD LENGTH=190
          Length = 190

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 52/113 (46%)

Query: 75  LGPFRYLVHANGICAGYSLLSAVFVAVPRPSPTMSRAWTFFLLDQVLTYIILGAGAASTE 134
           L  F Y +  N I  GY+ +S   + + R   +        L D V+  ++     A++ 
Sbjct: 77  LSAFVYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASA 136

Query: 135 VLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKL 187
           +  +   G+    W   CG FG+FC++   +  +T +A + ++ L ++ + KL
Sbjct: 137 IGLMGLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189


>AT5G06200.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:1877333-1878116 FORWARD LENGTH=202
          Length = 202

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 72  YTDLGPFRYLVHANGICAGYSLLSAVF--VAVPRPSPTMSRAWTFFLLDQVLTYIILGAG 129
           Y DL  F++ V A  I AGY +LS  F  V + RP     R     +LD     +   A 
Sbjct: 83  YDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPR-LLLLVLDTAALALDTAAA 141

Query: 130 AASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLTATTAITFVAVLCYVLLSIISSYKL 187
           +A+  ++YL   G+  T W   C  FG FC K +      F +V    +L +IS   L
Sbjct: 142 SAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGVSL 199


>AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:4967094-4967846 FORWARD LENGTH=187
          Length = 187

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 71  DYTDLGPFRYLVHANGICAGYSLLSAV--FVAVPRPSPTMSRAWTFFLLDQVLTYIILGA 128
           +Y DL    + V AN + +GY +LS    FV + +     +R     +LD  +  ++   
Sbjct: 66  EYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRIL-LIILDVAMLGLLTSG 124

Query: 129 GAASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLTAT 165
            +++  ++YL   G+  T W + C  F  FC +++ +
Sbjct: 125 ASSAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGS 161


>AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15159744-15160669 REVERSE LENGTH=206
          Length = 206

 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 72  YTDLGPFRYLVHANGICAGYSLLSAVF--VAVPRPSPTMSRAWTFFLLDQVLTYIILGAG 129
           Y DL  F+Y V A  + A Y +LS  F  V++ RP     R     + D ++  +   A 
Sbjct: 87  YDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPHAVAPR-LILLICDTLVVTLNTSAA 145

Query: 130 AASTEVLYLMEKGDAGTTWSSACGSFGRFCNKLT 163
           AA+  + YL   G+  T W   C  FG FC  ++
Sbjct: 146 AAAASITYLAHNGNQSTNWLPICQQFGDFCQNVS 179