Miyakogusa Predicted Gene
- Lj6g3v0352670.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0352670.1 Non Chatacterized Hit- tr|I1LLY6|I1LLY6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44870
PE,83.6,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
Helicase_C,Helicase, C-terminal; DEAD-like he,CUFF.57722.1
(545 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 327 2e-89
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 320 2e-87
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 317 1e-86
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 316 2e-86
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 315 4e-86
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 314 1e-85
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 313 2e-85
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 313 2e-85
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 313 2e-85
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 306 2e-83
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 298 5e-81
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 296 3e-80
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 289 5e-78
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 288 5e-78
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 285 7e-77
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 283 2e-76
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 283 2e-76
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 283 2e-76
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 283 2e-76
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 279 3e-75
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 274 1e-73
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 262 4e-70
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 254 2e-67
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 246 2e-65
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 241 1e-63
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 240 2e-63
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 228 9e-60
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 228 9e-60
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 226 4e-59
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 223 3e-58
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 222 6e-58
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 220 2e-57
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 220 2e-57
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 218 6e-57
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 218 9e-57
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 218 9e-57
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 217 2e-56
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 217 2e-56
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 215 8e-56
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 213 2e-55
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 213 2e-55
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 211 7e-55
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 210 2e-54
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 206 4e-53
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 206 5e-53
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 206 5e-53
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 204 2e-52
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 203 3e-52
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 201 2e-51
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 200 2e-51
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 198 6e-51
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 198 6e-51
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 191 2e-48
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 191 2e-48
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 182 4e-46
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 180 2e-45
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 176 3e-44
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 176 3e-44
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 176 5e-44
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 172 4e-43
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 171 2e-42
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 169 5e-42
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 2e-40
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 163 3e-40
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 160 3e-39
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 4e-38
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 154 1e-37
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 154 2e-37
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 151 9e-37
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 145 1e-34
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 134 1e-31
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 134 2e-31
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 129 4e-30
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 120 3e-27
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 117 2e-26
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 113 3e-25
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 110 3e-24
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 84 3e-16
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 80 4e-15
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 63 6e-10
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 62 8e-10
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 57 3e-08
AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent hel... 56 6e-08
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 55 2e-07
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 54 3e-07
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 53 5e-07
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 50 3e-06
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/393 (43%), Positives = 249/393 (63%), Gaps = 23/393 (5%)
Query: 76 VSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSI 135
V+ M ++EE R + V D P P+++F D+ +++++ +T PT I
Sbjct: 70 VAAMTDTEVEEYRKLREITVEGK----DIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPI 125
Query: 136 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 195
Q+Q P+A+ GRDL+G AETGSGKT ++ +P I H AQP + GDGP+ LVLAPTRELA
Sbjct: 126 QSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELA 185
Query: 196 QQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSL 255
QI++E F S KT + GG Q +L+ GVEIV+ATPGR ID ++ NT+L
Sbjct: 186 VQIQQEASKFGSS-SKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNL 244
Query: 256 SRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQ 315
R++++VLDEADRMLDMGF+PQIR+I+ ++ QTL +SAT P E+E+LSK++L +P +
Sbjct: 245 RRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYK 304
Query: 316 VKVGKVSSPTTNVSQNLVKV-SENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTR 374
V +G + +V V SE++K ++L+ LL E+ + +VF++ K
Sbjct: 305 VIIGSSDLKANRAIRQIVDVISESQKYNKLVKLL-EDIMDGSRI-------LVFLDTKKG 356
Query: 375 CDDVSEALVAQG---------RTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHV 425
CD ++ L G ++Q+ER+ L +FRSG + I+ ATDVA+RGLDV V +V
Sbjct: 357 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYV 416
Query: 426 INLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYT 458
IN D P ++EDYVHRIGRTGRAG+ G + +F+T
Sbjct: 417 INYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 449
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/419 (42%), Positives = 258/419 (61%), Gaps = 29/419 (6%)
Query: 79 MNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQ 138
+N Q+ + D+ + + P P+ TF ++ L ++ +I +Y +PT +Q
Sbjct: 116 VNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRN 175
Query: 139 AMPIALSGRDLLGCAETGSGKTAAFTIPMI------QHCLAQPPIRRGDGPLALVLAPTR 192
A+PI +GRDL+ CA+TGSGKTAAF P+I QH + +P RG PLA++L+PTR
Sbjct: 176 AIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQH-IERPRGVRGVYPLAVILSPTR 234
Query: 193 ELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGN 252
ELA QI E + FS K + GGT + +Q EL GV+I+VATPGR D L++G
Sbjct: 235 ELACQIHDEARKFSYQT-GVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGR 293
Query: 253 TSLSRISFVVLDEADRMLDMGFEPQIREIMRNL----PEKHQTLLFSATMPVEIEELSKE 308
SL + F+ LDEADRMLDMGFEPQIR+I++ + P QT+LFSAT P EI+ L+ +
Sbjct: 294 VSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASD 353
Query: 309 YLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLL---VEEASQAEKCGHPFPLT 365
+L++ + + VG+V S T + Q + V +++K L+ LL E +Q ++ LT
Sbjct: 354 FLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQA-----LT 408
Query: 366 IVFVERKTRCDDVSEALVAQG---------RTQSEREAALRDFRSGSTSILVATDVASRG 416
+VFVE K D + L G R+Q ERE ALR F++G T ILVATDVA+RG
Sbjct: 409 LVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARG 468
Query: 417 LDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADA 475
LD+ V+HV+N DLP ++DYVHRIGRTGRAG++GL+T+F+ D + + + + + +A
Sbjct: 469 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEA 527
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/384 (44%), Positives = 242/384 (63%), Gaps = 21/384 (5%)
Query: 103 DAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 162
D P P++ F D +I++ IA +T PT IQAQ P+AL GRDL+G AETGSGKT A
Sbjct: 159 DVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLA 218
Query: 163 FTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFS-RSLESFKTAIVVGGT 221
+ +P + H AQP + + DGP+ L+LAPTRELA QI++E + F RS ++ + GG
Sbjct: 219 YLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRS--GVRSTCIYGGA 276
Query: 222 NIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREI 281
Q +LR GVEIV+ATPGR ID L+ +T+L R++++VLDEADRMLDMGFEPQIR+I
Sbjct: 277 PKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKI 336
Query: 282 MRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVS-SPTTNVSQNLVKVSENEK 340
+ + QTLL+SAT P E+E L++++L P + +G +++Q + V EK
Sbjct: 337 VSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEK 396
Query: 341 IDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQG---------RTQSE 391
+RLL LL + ++ ++FVE K CD V+ L G +TQSE
Sbjct: 397 YNRLLTLLKQLMDGSK--------ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSE 448
Query: 392 REAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTG 451
R+ L +F+SG + I+ ATDVA+RGLDV + V+N D P T+EDY+HRIGRTGRAG+ G
Sbjct: 449 RDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKG 508
Query: 452 LSTSFYTDRDMFLVANIKKAIADA 475
++ +F+T + + K + +A
Sbjct: 509 MAFTFFTHDNAKFARELVKILQEA 532
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 248/403 (61%), Gaps = 27/403 (6%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
D+ + + P P+ TF ++ L ++ +I +Y +PT +Q A+PI L GRDL+ CA
Sbjct: 144 DIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACA 203
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDG-----PLALVLAPTRELAQQIEKEVKAFSRS 208
+TGSGKTAAF P+I + ++R G PLA++L+PTRELA QI E K FS
Sbjct: 204 QTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQ 263
Query: 209 LESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADR 268
K + GGT I +Q EL GV+I+VATPGR D L++ S+ I F+ LDEADR
Sbjct: 264 T-GVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADR 322
Query: 269 MLDMGFEPQIREIMR--NLPEK--HQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSP 324
MLDMGFEPQIR+I+ ++P + QTLLFSAT P EI+ L+ ++L + + + VG+V S
Sbjct: 323 MLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSS 382
Query: 325 TTNVSQNLVKVSENEKIDRLLGLL---VEEASQAEKCGHPFPLTIVFVERKTRCDDVSEA 381
T + Q + V +++K L+ LL E Q ++ LT+VFVE K D +
Sbjct: 383 TDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQA-----LTLVFVETKRGADSLENW 437
Query: 382 LVAQG---------RTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPK 432
L G RTQ ERE AL+ F+SG T ILVATDVA+RGLD+ V+HV+N DLP
Sbjct: 438 LCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPN 497
Query: 433 TMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADA 475
++DYVHRIGRTGRAG +GL+T+F+ D + L + + + +A
Sbjct: 498 DIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEA 540
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 169/414 (40%), Positives = 255/414 (61%), Gaps = 27/414 (6%)
Query: 76 VSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSI 135
+SRM +++ R L L V D P PI+ + L I+ + Y +P I
Sbjct: 162 ISRMTQEEVNTYRKELELKVHGK----DVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPI 217
Query: 136 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 195
Q QA+PI +SGRD +G A+TGSGKT F +PM++H QPP+ GDGP+ LV+APTREL
Sbjct: 218 QTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 277
Query: 196 QQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGN--- 252
QQI +++ FS+ L + V GG+ + +Q SEL+ G EIVV TPGR ID L +
Sbjct: 278 QQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKI 336
Query: 253 TSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTS 312
T+L R++F+V+DEADRM DMGFEPQI I++N+ + QT+LFSAT P ++E L+++ L
Sbjct: 337 TNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNK 396
Query: 313 PVQVKVGKVSSPTTNVSQNLVKVS-ENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVER 371
PV+++VG S +++Q LV+V E+++ RLL LL E + + + +VFV+
Sbjct: 397 PVEIQVGGRSVVNKDITQ-LVEVRPESDRFLRLLELLGEWSEKGK--------ILVFVQS 447
Query: 372 KTRCDDVSEALVAQ---------GRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGV 422
+ +CD + ++ G+ Q++RE+ + DF++ ++L+AT VA+RGLDV +
Sbjct: 448 QEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKEL 507
Query: 423 SHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADAE 476
V+N D P EDYVHR+GRTGRAG G + +F ++ D ++ KA+ +E
Sbjct: 508 ELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSE 561
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/414 (40%), Positives = 255/414 (61%), Gaps = 27/414 (6%)
Query: 76 VSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSI 135
+SRM +++ R L L V D P PI+ + L I+ + Y +P I
Sbjct: 500 ISRMTQEEVNTYRKELELKVHGK----DVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPI 555
Query: 136 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 195
Q QA+PI +SGRD +G A+TGSGKT F +PM++H QPP+ GDGP+ LV+APTREL
Sbjct: 556 QTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 615
Query: 196 QQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGN--- 252
QQI +++ FS+ L + V GG+ + +Q SEL+ G EIVV TPGR ID L +
Sbjct: 616 QQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKI 674
Query: 253 TSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTS 312
T+L R++F+V+DEADRM DMGFEPQI I++N+ + QT+LFSAT P ++E L+++ L
Sbjct: 675 TNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNK 734
Query: 313 PVQVKVGKVSSPTTNVSQNLVKVS-ENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVER 371
PV+++VG S +++Q LV+V E+++ RLL LL E + + + +VFV+
Sbjct: 735 PVEIQVGGRSVVNKDITQ-LVEVRPESDRFLRLLELLGEWSEKGK--------ILVFVQS 785
Query: 372 KTRCDDVSEALVAQ---------GRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGV 422
+ +CD + ++ G+ Q++RE+ + DF++ ++L+AT VA+RGLDV +
Sbjct: 786 QEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKEL 845
Query: 423 SHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADAE 476
V+N D P EDYVHR+GRTGRAG G + +F ++ D ++ KA+ +E
Sbjct: 846 ELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSE 899
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/400 (43%), Positives = 247/400 (61%), Gaps = 23/400 (5%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
D+ + D P P+ TF D+ L ++ +I +Y RPT +Q A+PI L+ RDL+ CA
Sbjct: 136 DIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACA 195
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDG-----PLALVLAPTRELAQQIEKEVKAFSRS 208
+TGSGKTAAF P+I + + R G P A++L+PTRELA QI E K FS
Sbjct: 196 QTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQ 255
Query: 209 LESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADR 268
K + GGT I +Q EL G +I+VATPGR D L++ S+ I F+ LDEADR
Sbjct: 256 T-GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 269 MLDMGFEPQIREIMR--NLPEK--HQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSP 324
MLDMGFEPQIR+I+ ++P + QT+LFSAT P +I+ L+ +++++ + + VG+V S
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 325 TTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL-- 382
T ++Q + V E++K L+ LL + +K LT+VFVE K D + L
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQS----LTLVFVETKRGADTLENWLCM 430
Query: 383 -------VAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTME 435
+ RTQ ERE ALR F++G T ILVATDVA+RGLD+ V+HV+N DLP ++
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 490
Query: 436 DYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADA 475
DYVHRIGRTGRAG +G++T+F+ + + L ++ + + +A
Sbjct: 491 DYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEA 530
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/400 (43%), Positives = 247/400 (61%), Gaps = 23/400 (5%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
D+ + D P P+ TF D+ L ++ +I +Y RPT +Q A+PI L+ RDL+ CA
Sbjct: 136 DIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACA 195
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDG-----PLALVLAPTRELAQQIEKEVKAFSRS 208
+TGSGKTAAF P+I + + R G P A++L+PTRELA QI E K FS
Sbjct: 196 QTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQ 255
Query: 209 LESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADR 268
K + GGT I +Q EL G +I+VATPGR D L++ S+ I F+ LDEADR
Sbjct: 256 T-GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 269 MLDMGFEPQIREIMR--NLPEK--HQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSP 324
MLDMGFEPQIR+I+ ++P + QT+LFSAT P +I+ L+ +++++ + + VG+V S
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 325 TTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL-- 382
T ++Q + V E++K L+ LL + +K LT+VFVE K D + L
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQS----LTLVFVETKRGADTLENWLCM 430
Query: 383 -------VAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTME 435
+ RTQ ERE ALR F++G T ILVATDVA+RGLD+ V+HV+N DLP ++
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 490
Query: 436 DYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADA 475
DYVHRIGRTGRAG +G++T+F+ + + L ++ + + +A
Sbjct: 491 DYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEA 530
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/400 (43%), Positives = 247/400 (61%), Gaps = 23/400 (5%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
D+ + D P P+ TF D+ L ++ +I +Y RPT +Q A+PI L+ RDL+ CA
Sbjct: 136 DIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACA 195
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDG-----PLALVLAPTRELAQQIEKEVKAFSRS 208
+TGSGKTAAF P+I + + R G P A++L+PTRELA QI E K FS
Sbjct: 196 QTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQ 255
Query: 209 LESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADR 268
K + GGT I +Q EL G +I+VATPGR D L++ S+ I F+ LDEADR
Sbjct: 256 T-GVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 269 MLDMGFEPQIREIMR--NLPEK--HQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSP 324
MLDMGFEPQIR+I+ ++P + QT+LFSAT P +I+ L+ +++++ + + VG+V S
Sbjct: 315 MLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSS 374
Query: 325 TTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL-- 382
T ++Q + V E++K L+ LL + +K LT+VFVE K D + L
Sbjct: 375 TDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQS----LTLVFVETKRGADTLENWLCM 430
Query: 383 -------VAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTME 435
+ RTQ ERE ALR F++G T ILVATDVA+RGLD+ V+HV+N DLP ++
Sbjct: 431 NEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDID 490
Query: 436 DYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADA 475
DYVHRIGRTGRAG +G++T+F+ + + L ++ + + +A
Sbjct: 491 DYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEA 530
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 246/405 (60%), Gaps = 26/405 (6%)
Query: 69 LWQPSERVSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHE 128
++ E +S M Q+ + R RL + V+ D P++TF D IM I
Sbjct: 192 FYEELESISGMTEQETTDYRQRLGIRVSGF----DVHRPVKTFEDCGFSSQIMSAIKKQA 247
Query: 129 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVL 188
Y +PT+IQ QA+PI LSGRD++G A+TGSGKTAAF +PMI H + QP ++R +GP+ ++
Sbjct: 248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVIC 307
Query: 189 APTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHL 248
APTRELA QI E K FS++ + + V GG + +Q EL+AG EIVVATPGR ID L
Sbjct: 308 APTRELAHQIFLEAKKFSKAY-GLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDML 366
Query: 249 QQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKE 308
+ ++ R S++VLDEADRM D+GFEPQ+R I+ + QTLLFSATMP ++E+L++E
Sbjct: 367 KMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLARE 426
Query: 309 YLTSPVQVKVGKVSSPTTNVSQNLVKV--SENEKIDRLLGLLVEEASQAEKCGHPFPLTI 366
L+ P++V VG+V +++Q +V V S+ EK+ LL L + + +
Sbjct: 427 ILSDPIRVTVGEVGMANEDITQ-VVNVIPSDAEKLPWLLEKLPGMIDEGD--------VL 477
Query: 367 VFVERKTRCDDVSEALVAQG---------RTQSEREAALRDFRSGSTSILVATDVASRGL 417
VF +K D++ L + Q+ R L+ F+SG +L+ATDVA+RGL
Sbjct: 478 VFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGL 537
Query: 418 DVTGVSHVINLDLPKTMEDYVHRIGRTGRAGS-TGLSTSFYTDRD 461
D+ + V+N D+ K M+ +VHRIGRTGRAG G++ + T R+
Sbjct: 538 DIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQRE 582
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/403 (40%), Positives = 242/403 (60%), Gaps = 39/403 (9%)
Query: 105 PTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT 164
P P+ ++ + L ++K + Y +P+ IQ A+P+ L RD++G AETGSGKTAAF
Sbjct: 309 PRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFV 368
Query: 165 IPMIQHCLAQPPI---RRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGT 221
+PM+ + PP+ +GP A+V+APTRELAQQIE+E F+ L F+ +VGG
Sbjct: 369 LPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL-GFRVTSIVGGQ 427
Query: 222 NIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREI 281
+IE+Q ++ G EIV+ATPGR ID L++ L++ ++VVLDEADRM+DMGFEPQ+ +
Sbjct: 428 SIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGV 487
Query: 282 MRNLPEKH-----------------QTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSP 324
+ +P + T +FSATMP +E L+++YL +PV V +G
Sbjct: 488 LDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKT 547
Query: 325 TTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL-- 382
T +SQ+++ + E+EK RL LL E + IVFV K CD +++ L
Sbjct: 548 TDLISQHVIMMKESEKFFRLQKLLDELGEKT---------AIVFVNTKKNCDSIAKNLDK 598
Query: 383 -------VAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTME 435
+ G++Q +RE +L FR+ ++LVATDV RG+D+ V+HVIN D+PK +E
Sbjct: 599 AGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIE 658
Query: 436 DYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADAESG 478
Y HRIGRTGRAG +G++TSF T D + ++K+ + + S
Sbjct: 659 MYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSA 701
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 241/405 (59%), Gaps = 38/405 (9%)
Query: 76 VSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSI 135
+SRM + R L L V D P PI+ + L I+ + Y +P I
Sbjct: 367 ISRMTQDAVNAYRKELELKVHGK----DVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPI 422
Query: 136 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 195
QAQA+PI +SGRD +G A+TGSGKT F +PM++H QPP+ GDGP+ LV+APTREL
Sbjct: 423 QAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 482
Query: 196 QQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGN--- 252
QQI +++ FS++L V GG+ + +Q SEL+ G EIVV TPGR ID L +
Sbjct: 483 QQIYSDIRKFSKAL-GIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKI 541
Query: 253 TSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTS 312
T+L R++++V+DEADRM DMGFEPQI I++N+ QT+LFSAT P ++E L+++ L
Sbjct: 542 TNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNK 601
Query: 313 PVQVKVGKVSSPTTNVSQNLVKVS-ENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVER 371
PV+++VG S +++Q LV++ E+E+ RLL LL E + + +VFV
Sbjct: 602 PVEIQVGGRSVVNKDITQ-LVEIRPESERFSRLLELLGEWYEKGK--------VLVFV-- 650
Query: 372 KTRCDDVSEALVAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLP 431
R+Q E ++ DF+S ++L+AT VA+RGLDV + V+N D P
Sbjct: 651 ---------------RSQ---EKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAP 692
Query: 432 KTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADAE 476
EDYVHR+GRTGRAG G + +F ++ D ++ KA+ +E
Sbjct: 693 NHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSE 737
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 232/410 (56%), Gaps = 31/410 (7%)
Query: 64 DPLFPLWQPSERVSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKD 123
+PL W+P V +M+ +Q++ +R + ++ V D P PI+ F DM +++
Sbjct: 56 EPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGE----DIPPPIKNFMDMKFPSPLLRM 111
Query: 124 IAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQP---PIRRG 180
+ PT IQ Q +P+ LSGRD++G A TGSGKT F +PMI L + PI G
Sbjct: 112 LKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAG 171
Query: 181 DGPLALVLAPTRELAQQIEKEVKAFSRSLES-----FKTAIVVGGTNIEKQRSELRAGVE 235
+GP+ALV+ P+RELA+Q V+ F SL ++ + +GG ++ Q ++ GV
Sbjct: 172 EGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVH 231
Query: 236 IVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFS 295
IVVATPGR D L + SL + LDEADR++D+GFE IR + + + QTLLFS
Sbjct: 232 IVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFS 291
Query: 296 ATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQA 355
ATMP +I+ + L PV V VG+ + +V Q + V + KI LL L +
Sbjct: 292 ATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTT--- 348
Query: 356 EKCGHPFPLTIVFVERKTRCDDVSEALVAQ---------GRTQSEREAALRDFRSGSTSI 406
P ++F E K DD+ E L+ + G+ Q +R+ A+ F++G +
Sbjct: 349 -------PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDV 401
Query: 407 LVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
LVATDVAS+GLD + HVIN D+P +E+YVHRIGRTGR G TG++T+F
Sbjct: 402 LVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTF 451
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 234/410 (57%), Gaps = 31/410 (7%)
Query: 64 DPLFPLWQPSERVSRMNPQQIEEVRIRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKD 123
+PL W+P + +M+ +Q + +R + ++ V D P PI+ F DM ++
Sbjct: 105 EPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGD----DIPPPIKNFKDMKFPRPVLDT 160
Query: 124 IAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQP---PIRRG 180
+ +PT IQ Q +P+ L+GRD++G A TGSGKT F +PMI L + PI G
Sbjct: 161 LKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAG 220
Query: 181 DGPLALVLAPTRELAQQIEKEVKAFSRSLES-----FKTAIVVGGTNIEKQRSELRAGVE 235
+GP+ L++ P+RELA+Q + V+ F L ++ + +GG ++ Q ++ GV
Sbjct: 221 EGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVH 280
Query: 236 IVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFS 295
IVVATPGR D L + SL ++ LDEADR++D+GFE IRE+ + + QTLLFS
Sbjct: 281 IVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFS 340
Query: 296 ATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQA 355
ATMP +I+ ++ L PV V VG+ + +V Q + V + KI LL L + +
Sbjct: 341 ATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTS--- 397
Query: 356 EKCGHPFPLTIVFVERKTRCDDVSEALVAQ---------GRTQSEREAALRDFRSGSTSI 406
P ++F E K DD+ E L+ + G+ Q +RE A+ F++G +
Sbjct: 398 -------PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDV 450
Query: 407 LVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
LVATDVAS+GLD + HVIN D+P +E+YVHRIGRTGR G TG++T+F
Sbjct: 451 LVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 228/389 (58%), Gaps = 32/389 (8%)
Query: 103 DAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 162
+ P P TF L P I++++ + PT IQAQ PIAL RD++ A+TGSGKT
Sbjct: 429 NIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLG 488
Query: 163 FTIP---MIQHCLAQPPIRRGD---GPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAI 216
+ IP +++HC R D GP L+LAPTRELA QI+ E F RS
Sbjct: 489 YLIPAFILLRHC-------RNDSRNGPTVLILAPTRELATQIQDEALRFGRS-SRISCTC 540
Query: 217 VVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEP 276
+ GG Q EL G +IVVATPGR D L+ ++S +VLDEADRMLDMGFEP
Sbjct: 541 LYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEP 600
Query: 277 QIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVK 334
QIR+I+ +P + QTL+++AT P E+ +++ + L +PVQV +G+V N ++Q +
Sbjct: 601 QIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEV 660
Query: 335 VSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSE-------ALVAQG- 386
V + EK RL +L + ++ I+F K CD ++ A+V G
Sbjct: 661 VPQMEKERRLEQILRSQERGSK--------VIIFCSTKRLCDHLARSVGRHFGAVVIHGD 712
Query: 387 RTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGR 446
+TQ ER+ L FRSG + +L+ATDVA+RGLD+ + VIN D P +EDYVHRIGRTGR
Sbjct: 713 KTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGR 772
Query: 447 AGSTGLSTSFYTDRDMFLVANIKKAIADA 475
AG+TG++ +F+T++D ++ K + A
Sbjct: 773 AGATGVAFTFFTEQDWKYAPDLIKVLEGA 801
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 225/383 (58%), Gaps = 24/383 (6%)
Query: 105 PTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT 164
P P+ +F P +++++ ++ PT IQAQ+ PIA+ GRD++ A+TGSGKT +
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 165 IPMIQHCLAQPPIRRGD--GPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTN 222
IP H IR GP LVL+PTRELA QI++E F RS + GG
Sbjct: 214 IPGFLHLQR---IRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS-SRISCTCLYGGAP 269
Query: 223 IEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIM 282
Q +L G +IVVATPGR D L+ SL +IS++VLDEADRMLDMGFEPQIR+I+
Sbjct: 270 KGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIV 329
Query: 283 RNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEK 340
+ +P K QTL+++AT P + +++ + L +P QV +G V N ++Q++ V+ EK
Sbjct: 330 KEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEK 389
Query: 341 IDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQ--------GRTQSER 392
RL +L + P I+F K CD ++ L Q ++Q ER
Sbjct: 390 QRRLEQIL--------RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPER 441
Query: 393 EAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGL 452
+ L FRSG T +LVATDVA+RGLDV + V+N D P +EDYVHRIGRTGRAG+TG
Sbjct: 442 DNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQ 501
Query: 453 STSFYTDRDMFLVANIKKAIADA 475
+ +F+ D+D +++ K + A
Sbjct: 502 AFTFFGDQDSKHASDLIKILEGA 524
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 225/383 (58%), Gaps = 24/383 (6%)
Query: 105 PTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT 164
P P+ +F P +++++ ++ PT IQAQ+ PIA+ GRD++ A+TGSGKT +
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 165 IPMIQHCLAQPPIRRGD--GPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTN 222
IP H IR GP LVL+PTRELA QI++E F RS + GG
Sbjct: 214 IPGFLHLQR---IRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS-SRISCTCLYGGAP 269
Query: 223 IEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIM 282
Q +L G +IVVATPGR D L+ SL +IS++VLDEADRMLDMGFEPQIR+I+
Sbjct: 270 KGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIV 329
Query: 283 RNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEK 340
+ +P K QTL+++AT P + +++ + L +P QV +G V N ++Q++ V+ EK
Sbjct: 330 KEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEK 389
Query: 341 IDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQ--------GRTQSER 392
RL +L + P I+F K CD ++ L Q ++Q ER
Sbjct: 390 QRRLEQIL--------RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPER 441
Query: 393 EAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGL 452
+ L FRSG T +LVATDVA+RGLDV + V+N D P +EDYVHRIGRTGRAG+TG
Sbjct: 442 DNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQ 501
Query: 453 STSFYTDRDMFLVANIKKAIADA 475
+ +F+ D+D +++ K + A
Sbjct: 502 AFTFFGDQDSKHASDLIKILEGA 524
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 225/383 (58%), Gaps = 24/383 (6%)
Query: 105 PTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT 164
P P+ +F P +++++ ++ PT IQAQ+ PIA+ GRD++ A+TGSGKT +
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 165 IPMIQHCLAQPPIRRGD--GPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTN 222
IP H IR GP LVL+PTRELA QI++E F RS + GG
Sbjct: 214 IPGFLHLQR---IRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS-SRISCTCLYGGAP 269
Query: 223 IEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIM 282
Q +L G +IVVATPGR D L+ SL +IS++VLDEADRMLDMGFEPQIR+I+
Sbjct: 270 KGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIV 329
Query: 283 RNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEK 340
+ +P K QTL+++AT P + +++ + L +P QV +G V N ++Q++ V+ EK
Sbjct: 330 KEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEK 389
Query: 341 IDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQ--------GRTQSER 392
RL +L + P I+F K CD ++ L Q ++Q ER
Sbjct: 390 QRRLEQIL--------RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPER 441
Query: 393 EAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGL 452
+ L FRSG T +LVATDVA+RGLDV + V+N D P +EDYVHRIGRTGRAG+TG
Sbjct: 442 DNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQ 501
Query: 453 STSFYTDRDMFLVANIKKAIADA 475
+ +F+ D+D +++ K + A
Sbjct: 502 AFTFFGDQDSKHASDLIKILEGA 524
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 225/383 (58%), Gaps = 24/383 (6%)
Query: 105 PTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT 164
P P+ +F P +++++ ++ PT IQAQ+ PIA+ GRD++ A+TGSGKT +
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 165 IPMIQHCLAQPPIRRGD--GPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTN 222
IP H IR GP LVL+PTRELA QI++E F RS + GG
Sbjct: 214 IPGFLHLQR---IRNDSRMGPTILVLSPTRELATQIQEEAVKFGRS-SRISCTCLYGGAP 269
Query: 223 IEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIM 282
Q +L G +IVVATPGR D L+ SL +IS++VLDEADRMLDMGFEPQIR+I+
Sbjct: 270 KGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIV 329
Query: 283 RNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEK 340
+ +P K QTL+++AT P + +++ + L +P QV +G V N ++Q++ V+ EK
Sbjct: 330 KEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEK 389
Query: 341 IDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQ--------GRTQSER 392
RL +L + P I+F K CD ++ L Q ++Q ER
Sbjct: 390 QRRLEQIL--------RSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPER 441
Query: 393 EAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGL 452
+ L FRSG T +LVATDVA+RGLDV + V+N D P +EDYVHRIGRTGRAG+TG
Sbjct: 442 DNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQ 501
Query: 453 STSFYTDRDMFLVANIKKAIADA 475
+ +F+ D+D +++ K + A
Sbjct: 502 AFTFFGDQDSKHASDLIKILEGA 524
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 225/381 (59%), Gaps = 20/381 (5%)
Query: 105 PTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFT 164
P P+ +F L +++++ ++ P+ IQAQ+ PIA+ RD++ A+TGSGKT +
Sbjct: 157 PPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYL 216
Query: 165 IPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIE 224
IP H R GP LVL+PTRELA QI+ E F +S A + GG
Sbjct: 217 IPGFMHLQRIHNDSR-MGPTILVLSPTRELATQIQVEALKFGKS-SKISCACLYGGAPKG 274
Query: 225 KQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRN 284
Q E+ GV+IVVATPGR D L+ SL ++S++VLDEADRMLDMGFEPQIR+I+
Sbjct: 275 PQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNE 334
Query: 285 LPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEKID 342
+P K QTL+++AT P E+ +++ + L +P QV +G V N ++Q + ++ EK
Sbjct: 335 VPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHS 394
Query: 343 RLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL--------VAQGRTQSEREA 394
RL +L + P I+F K CD ++ L + ++Q+ER+
Sbjct: 395 RLEQIL--------RSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDD 446
Query: 395 ALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLST 454
L FRSG T +LVATDVA+RGLDV + V+N D P +EDYVHRIGRTGRAG+TGL+
Sbjct: 447 VLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAY 506
Query: 455 SFYTDRDMFLVANIKKAIADA 475
+F+ D+D +++ K + A
Sbjct: 507 TFFGDQDAKHASDLIKILEGA 527
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 222/380 (58%), Gaps = 20/380 (5%)
Query: 107 PIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIP 166
P F + P+ + + ++ P+ IQAQ+ PIA+ RD++ A+TGSGKT + IP
Sbjct: 227 PAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 286
Query: 167 MIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQ 226
H L + GP LVL+PTRELA QI+ E F +S A + GG Q
Sbjct: 287 GFMH-LQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKS-SKISCACLYGGAPKGPQ 344
Query: 227 RSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLP 286
E+ GV+IVVATPGR D L+ SL ++S++VLDEADRMLDMGFEPQIR+I+ +P
Sbjct: 345 LKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP 404
Query: 287 EKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEKIDRL 344
K QTL+++AT P E+ +++ + L +P QV +G V N ++Q + ++ EK RL
Sbjct: 405 TKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRL 464
Query: 345 LGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL--------VAQGRTQSEREAAL 396
+L + P I+F K CD ++ L + ++Q+ER+ L
Sbjct: 465 EQILRSQ--------EPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVL 516
Query: 397 RDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
FRSG T +LVATDVA+RGLDV + V+N D P +EDYVHRIGRTGRAG+TGL+ +F
Sbjct: 517 NQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 576
Query: 457 YTDRDMFLVANIKKAIADAE 476
+ D+D +++ K + A
Sbjct: 577 FGDQDAKHASDLIKILEGAN 596
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 207/331 (62%), Gaps = 21/331 (6%)
Query: 103 DAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 162
D P P++ F D +I++ IA +T PT IQAQ P+AL GRDL+G AETGSGKT A
Sbjct: 159 DVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLA 218
Query: 163 FTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFS-RSLESFKTAIVVGGT 221
+ +P + H AQP + + DGP+ L+LAPTRELA QI++E + F RS ++ + GG
Sbjct: 219 YLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRS--GVRSTCIYGGA 276
Query: 222 NIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREI 281
Q +LR GVEIV+ATPGR ID L+ +T+L R++++VLDEADRMLDMGFEPQIR+I
Sbjct: 277 PKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKI 336
Query: 282 MRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVS-SPTTNVSQNLVKVSENEK 340
+ + QTLL+SAT P E+E L++++L P + +G +++Q + V EK
Sbjct: 337 VSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEK 396
Query: 341 IDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQG---------RTQSE 391
+RLL LL + ++ ++FVE K CD V+ L G +TQSE
Sbjct: 397 YNRLLTLLKQLMDGSK--------ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSE 448
Query: 392 REAALRDFRSGSTSILVATDVASRGLDVTGV 422
R+ L +F+SG + I+ ATDVA+RGL +G+
Sbjct: 449 RDRVLAEFKSGRSPIMTATDVAARGLVSSGI 479
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 215/364 (59%), Gaps = 44/364 (12%)
Query: 132 PTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIR---RGDGPLALVL 188
P + +P+ L RD++G + TGSGKTAAF +PM+ + PP+R + +GP ALV+
Sbjct: 225 PMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVM 284
Query: 189 APTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHL 248
PTRELA QIE+E FSR L FK + G +IEKQ +L G EIV+ATPGR +D L
Sbjct: 285 VPTRELAHQIEEETVKFSRYL-GFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCL 343
Query: 249 QQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKH-----------------QT 291
++ L++ +++VLDEADRM+DM FEPQ+ E++ +P + T
Sbjct: 344 ERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTT 403
Query: 292 LLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEE 351
+FSATM + +E L++++L +PV V +G+ T ++Q ++ E++K RL L+ +
Sbjct: 404 YMFSATMLLSVERLARKFLRNPVVVTIGET---TKFITQQVIMTKESDKFSRLKKLIDDL 460
Query: 352 ASQAEKCGHPFPLTIVFVERKTRCDDVSEAL----------VAQGRTQSEREAALRDFRS 401
IVFV + + D + + L + G++Q +R+ +L +F+
Sbjct: 461 GDDK--------TAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKK 512
Query: 402 GSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYT--D 459
++LV TDV RGLD+ ++ VIN D+P TM+ Y HRIGRTGRAG TG++T+F T D
Sbjct: 513 KRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLED 572
Query: 460 RDMF 463
+D+F
Sbjct: 573 KDVF 576
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 206/357 (57%), Gaps = 20/357 (5%)
Query: 112 TDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHC 171
+++ + P I+K ++ + IQ + A+ GRD++G A TG+GKT AF IP+I
Sbjct: 107 SELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 166
Query: 172 LAQPPIR-RGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSEL 230
+ RG PL LVLAPTRELA+Q+EKE F S S T + GGT I +Q +L
Sbjct: 167 IKYNAKHGRGRNPLCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRQL 223
Query: 231 RAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQ 290
GV++ V TPGR ID +++G +LS + FVVLDEAD+ML +GF + I+ LPEK Q
Sbjct: 224 DYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQ 283
Query: 291 TLLFSATMPVEIEELSKEYLTSPVQVK-VGKVSSPTTNVSQNLVKVSENEKIDRLLGLLV 349
+++FSATMP I L+K+YL +P+ V VG + ++++ ++G LV
Sbjct: 284 SMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLV 343
Query: 350 EEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGR--------TQSEREAALRDFRS 401
E ++ KC IVF + K D +S AL + +QS+RE L FR
Sbjct: 344 TEHAKGGKC-------IVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRD 396
Query: 402 GSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYT 458
G +ILVATDVA+RGLDV V +I+ +LP E +VHR GRTGRAG G + Y+
Sbjct: 397 GHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYS 453
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 219/383 (57%), Gaps = 24/383 (6%)
Query: 108 IETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 167
++TF + L +++ + +P+ IQ+ P L GRDL+G A+TGSGKT AF IP
Sbjct: 115 LKTFAESNLPENVLD--CCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 168 IQHCLAQPPIRRGDG-----PLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTN 222
I H L + + G G P LVL+PTRELA QI ++ K+ V GG++
Sbjct: 173 IMHVLKKNK-KIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPC-GLKSICVYGGSS 230
Query: 223 IEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIM 282
Q S +R+GV+IV+ TPGR D ++ LS +SFVVLDEADRMLDMGFE +R I+
Sbjct: 231 KGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFIL 290
Query: 283 RNLPEKHQTLLFSATMPVEIEELSKEYLT-SPVQVKVGKVSSPTTNVSQNLVKVSENEKI 341
N + Q ++FSAT P+++ +L++E++ +P++V +G V + +++V +
Sbjct: 291 SNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERAR 350
Query: 342 DRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQG---------RTQSER 392
D+ L L+E+ +++K +VF K + + L +G + QSER
Sbjct: 351 DQRLIALLEKYHKSQK-----NRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSER 405
Query: 393 EAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGL 452
+L F+ GS +LVATDVA+RGLD+ V VIN P T EDYVHRIGRTGRAG G+
Sbjct: 406 TRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGV 465
Query: 453 STSFYTDRDMFLVANIKKAIADA 475
+ +F+T + L + + +A
Sbjct: 466 AHTFFTPLNKGLAGELVNVLREA 488
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 199/349 (57%), Gaps = 20/349 (5%)
Query: 113 DMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCL 172
D+ + P I+K + + IQ + A+ GRD++G A TG+GKT AF IP+I +
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 173 A-QPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELR 231
RG P LVLAPTRELA+Q+EKE F S S T + GGT I +Q EL
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRELN 236
Query: 232 AGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQT 291
G+++ V TPGR ID +++G +LS + FVVLDEAD+ML +GF + I++ LP K Q+
Sbjct: 237 YGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQS 296
Query: 292 LLFSATMPVEIEELSKEYLTSPVQVK-VGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVE 350
++FSATMP I L+K+YL +P+ + VG + +++ ++G LV+
Sbjct: 297 MMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVK 356
Query: 351 EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGR--------TQSEREAALRDFRSG 402
E + KC IVF + K D ++ L + +Q++RE L FR G
Sbjct: 357 EHGKGGKC-------IVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDG 409
Query: 403 STSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTG 451
+ SILVATDVA+RGLDV V VI+ +LP E +VHR GRTGRAG G
Sbjct: 410 NFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKG 458
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 212/402 (52%), Gaps = 26/402 (6%)
Query: 89 IRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRD 148
+R LD+ P P+ TFT L P ++ ++ Y PT IQ QA+P AL+G+
Sbjct: 90 LRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKS 149
Query: 149 LLGCAETGSGKTAAFTIPMIQHCL---AQPPIRRGDGPLALVLAPTRELAQQIEKEVKAF 205
LL A+TGSGKTA+F +P+I C ++ P + PLA+VLAPTREL Q+E + K
Sbjct: 150 LLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKML 209
Query: 206 SRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDE 265
+ L FKTA+VVGG + Q ++ GVE+++ TPGR +D L + L I VLDE
Sbjct: 210 GKGL-PFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDE 268
Query: 266 ADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPT 325
D ML GF Q+ +I + L + Q LLFSAT+ E+E++ + V +G + P
Sbjct: 269 VDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 326 TNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL-VA 384
V+Q + V +K +L +L + H P +V+V + D ++ A+ V
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQ-------NHFKPPAVVYVSSRVGADLLANAITVV 380
Query: 385 QG---------RTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTME 435
G + ER + F G +LV+T V RG+D+ V VI D+P T++
Sbjct: 381 TGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIK 440
Query: 436 DYVHRIGRTGRAGSTGLSTSFYT--DRDMF--LVANIKKAIA 473
+Y+H IGR R G G + F DR++F LVA +K + A
Sbjct: 441 EYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGA 482
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 212/402 (52%), Gaps = 26/402 (6%)
Query: 89 IRLNLDVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRD 148
+R LD+ P P+ TFT L P ++ ++ Y PT IQ QA+P AL+G+
Sbjct: 90 LRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKS 149
Query: 149 LLGCAETGSGKTAAFTIPMIQHCL---AQPPIRRGDGPLALVLAPTRELAQQIEKEVKAF 205
LL A+TGSGKTA+F +P+I C ++ P + PLA+VLAPTREL Q+E + K
Sbjct: 150 LLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKML 209
Query: 206 SRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDE 265
+ L FKTA+VVGG + Q ++ GVE+++ TPGR +D L + L I VLDE
Sbjct: 210 GKGL-PFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDE 268
Query: 266 ADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPT 325
D ML GF Q+ +I + L + Q LLFSAT+ E+E++ + V +G + P
Sbjct: 269 VDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 326 TNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL-VA 384
V+Q + V +K +L +L + H P +V+V + D ++ A+ V
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQ-------NHFKPPAVVYVSSRVGADLLANAITVV 380
Query: 385 QG---------RTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTME 435
G + ER + F G +LV+T V RG+D+ V VI D+P T++
Sbjct: 381 TGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIK 440
Query: 436 DYVHRIGRTGRAGSTGLSTSFYT--DRDMF--LVANIKKAIA 473
+Y+H IGR R G G + F DR++F LVA +K + A
Sbjct: 441 EYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGA 482
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 209/375 (55%), Gaps = 21/375 (5%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
+TF ++ L +++ Y +PT IQA +P+AL+GRDL A TGSGKTAAF +P +
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 169 QHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRS 228
+ L +P +R L+L PTRELA QI ++ ++ K ++VGG ++ +Q
Sbjct: 227 ERLLFRP--KRVFATRVLILTPTRELAVQIHSMIQNLAQ-FTDIKCGLIVGGLSVREQEV 283
Query: 229 ELRAGVEIVVATPGRFIDHLQQG-NTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPE 287
LR+ +IVVATPGR IDHL+ + L ++ ++LDEADR+L GF +I E++R P+
Sbjct: 284 VLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPK 343
Query: 288 KHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGL 347
+ QT+LFSATM E++EL K L P+++ + +++ +V++ + +
Sbjct: 344 RRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREAN----- 398
Query: 348 LVEEASQAEKCGHPFP-LTIVFVERKTRCDDVS--------EALVAQGR-TQSEREAALR 397
+EA C F I+F K + +A G TQ++R +L
Sbjct: 399 --QEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLE 456
Query: 398 DFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFY 457
FR L+ATDVA+RGLD+ GV VIN P+ ++ YVHR+GRT RAG G + +F
Sbjct: 457 LFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFV 516
Query: 458 TDRDMFLVANIKKAI 472
TD D L+ I K +
Sbjct: 517 TDSDRSLLKVIAKKV 531
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 210/379 (55%), Gaps = 19/379 (5%)
Query: 108 IETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 167
++TF ++ + ++K + P+ IQA+A+P AL G+D++G A+TGSGKT AF IP+
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 168 IQHCL-----AQPPIRRGDGP--LALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGG 220
+Q L ++P R P A VL+PTRELA QI ++ +A + S + A++VGG
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADI-SLRCAVLVGG 126
Query: 221 TNIEKQRSELRAGVEIVVATPGRFIDHLQQGNT-SLSRISFVVLDEADRMLDMGFEPQIR 279
+ +Q L ++VATPGR DH+ SL + ++VLDEADR+L+ FE +
Sbjct: 127 IDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLN 186
Query: 280 EIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENE 339
+I+ +P + +T LFSATM ++ +L + L +PV+++ S + Q V+
Sbjct: 187 QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKY 246
Query: 340 KIDRLLGLLVE--EASQ---AEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQSEREA 394
K L+ +L E E++ C L +V R +S + TQS+R
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQM-----TQSKRLG 301
Query: 395 ALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLST 454
AL F++G +ILV TDVASRGLD+ V VIN D+P +DY+HR+GRT RAG +G+
Sbjct: 302 ALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGI 361
Query: 455 SFYTDRDMFLVANIKKAIA 473
S ++ I+K I
Sbjct: 362 SLVNQYELEWYIQIEKLIG 380
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 214/375 (57%), Gaps = 31/375 (8%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
++F M L P +++ I + + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 41 DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVL 100
Query: 169 QHC---LAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q L Q ALVLAPTRELAQQIEK ++A L K VGGT++ +
Sbjct: 101 QQLDISLVQCQ--------ALVLAPTRELAQQIEKVMRALGDYL-GVKAQACVGGTSVRE 151
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L++GV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 152 DQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLL 211
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENE-KIDRL 344
P K Q +FSATMP E E++++++ PV++ V + + Q V V + E K++ L
Sbjct: 212 PSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETL 271
Query: 345 LGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAA 395
L A +++FV + + D +++ + ++ T Q+ R+
Sbjct: 272 CDLYETLA---------ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 322
Query: 396 LRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTS 455
+R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +
Sbjct: 323 MREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAIN 382
Query: 456 FYTDRDMFLVANIKK 470
F T D ++A+I++
Sbjct: 383 FMTSEDERMMADIQR 397
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 213/374 (56%), Gaps = 29/374 (7%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
E+F M L ++++ I + + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 169 QHC---LAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q L Q ALVLAPTRELAQQIEK ++A L K VGGT++ +
Sbjct: 99 QQLDFSLIQCQ--------ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 149
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L+AGV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 150 DQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLL 209
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLL 345
P K Q +FSATMP E E+++++++ PV++ V + + Q V V + E L
Sbjct: 210 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETL 269
Query: 346 GLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAAL 396
L E + + +++FV + + D +++ + ++ T Q+ R+ +
Sbjct: 270 CDLYETLAITQ--------SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 321
Query: 397 RDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +F
Sbjct: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 381
Query: 457 YTDRDMFLVANIKK 470
T D ++ +I+K
Sbjct: 382 VTRDDERMLFDIQK 395
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 213/374 (56%), Gaps = 29/374 (7%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
E+F M L ++++ I + + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 29 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 88
Query: 169 QHC---LAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q L Q ALVLAPTRELAQQIEK ++A L K VGGT++ +
Sbjct: 89 QQLDFSLIQCQ--------ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 139
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L+AGV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 140 DQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLL 199
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLL 345
P K Q +FSATMP E E+++++++ PV++ V + + Q V V + E L
Sbjct: 200 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETL 259
Query: 346 GLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAAL 396
L E + + +++FV + + D +++ + ++ T Q+ R+ +
Sbjct: 260 CDLYETLAITQ--------SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 311
Query: 397 RDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +F
Sbjct: 312 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 371
Query: 457 YTDRDMFLVANIKK 470
T D ++ +I+K
Sbjct: 372 VTRDDERMLFDIQK 385
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 215/375 (57%), Gaps = 31/375 (8%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
E+F M L ++++ I + + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 169 Q---HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q + L Q ALVLAPTRELAQQIEK ++A + K VGGT++ +
Sbjct: 99 QQLDYALLQCQ--------ALVLAPTRELAQQIEKVMRALG-DYQGVKVHACVGGTSVRE 149
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L+AGV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 150 DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLL 209
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKV-SENEKIDRL 344
P K Q +FSATMP E E+++++++ PV++ V + + Q V V E+ K++ L
Sbjct: 210 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETL 269
Query: 345 LGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAA 395
L A +++FV + + D +++ + ++ T Q+ R+
Sbjct: 270 CDLYETLA---------ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 320
Query: 396 LRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTS 455
+R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +
Sbjct: 321 MREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAIN 380
Query: 456 FYTDRDMFLVANIKK 470
F T D ++ +I+K
Sbjct: 381 FVTLDDQRMLFDIQK 395
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 197/353 (55%), Gaps = 24/353 (6%)
Query: 135 IQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQP----PIRR-GDGPLALVLA 189
IQ + AL GRD++ A+TG+GKT AF IP+I+ + RR G P LVLA
Sbjct: 128 IQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLA 187
Query: 190 PTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQ 249
PTRELA+Q+EKE+K S T V GG + Q+S L GV++VV TPGR ID ++
Sbjct: 188 PTRELAKQVEKEIK---ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 244
Query: 250 QGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEY 309
+ L + ++VLDEAD+ML +GFE + I+ NLP K Q++LFSATMP +++L+++Y
Sbjct: 245 GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKY 304
Query: 310 LTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDR-LLGLLVEEASQAEKCGHPFPLTIVF 368
L +P+ + + L ++ R +L L+ ++ K TIVF
Sbjct: 305 LDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGK-------TIVF 357
Query: 369 VERKTRCDDVSEALVAQGRT--------QSEREAALRDFRSGSTSILVATDVASRGLDVT 420
+ K D+VS AL T Q +RE L FR G ++LVATDVASRGLD+
Sbjct: 358 TQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIP 417
Query: 421 GVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIA 473
V VI+ +LP E +VHR GRTGRAG G + +T V ++++ +
Sbjct: 418 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVG 470
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 197/353 (55%), Gaps = 24/353 (6%)
Query: 135 IQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQP----PIRR-GDGPLALVLA 189
IQ + AL GRD++ A+TG+GKT AF IP+I+ + RR G P LVLA
Sbjct: 128 IQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLA 187
Query: 190 PTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQ 249
PTRELA+Q+EKE+K S T V GG + Q+S L GV++VV TPGR ID ++
Sbjct: 188 PTRELAKQVEKEIK---ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 244
Query: 250 QGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEY 309
+ L + ++VLDEAD+ML +GFE + I+ NLP K Q++LFSATMP +++L+++Y
Sbjct: 245 GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKY 304
Query: 310 LTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDR-LLGLLVEEASQAEKCGHPFPLTIVF 368
L +P+ + + L ++ R +L L+ ++ K TIVF
Sbjct: 305 LDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGK-------TIVF 357
Query: 369 VERKTRCDDVSEALVAQGRT--------QSEREAALRDFRSGSTSILVATDVASRGLDVT 420
+ K D+VS AL T Q +RE L FR G ++LVATDVASRGLD+
Sbjct: 358 TQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIP 417
Query: 421 GVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIA 473
V VI+ +LP E +VHR GRTGRAG G + +T V ++++ +
Sbjct: 418 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVG 470
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 207/365 (56%), Gaps = 29/365 (7%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
E+F M L ++++ I + + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 169 QHC---LAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q L Q ALVLAPTRELAQQIEK ++A L K VGGT++ +
Sbjct: 99 QQLDFSLIQCQ--------ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 149
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L+AGV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 150 DQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLL 209
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLL 345
P K Q +FSATMP E E+++++++ PV++ V + + Q V V + E L
Sbjct: 210 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETL 269
Query: 346 GLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAAL 396
L E + + +++FV + + D +++ + ++ T Q+ R+ +
Sbjct: 270 CDLYETLAITQ--------SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 321
Query: 397 RDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +F
Sbjct: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 381
Query: 457 YTDRD 461
T D
Sbjct: 382 VTRDD 386
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/354 (38%), Positives = 200/354 (56%), Gaps = 25/354 (7%)
Query: 134 SIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQP----PIRR-GDGPLALVL 188
+++A +P AL GRD++ A+TG+GKT AF IP+I+ + RR G P LVL
Sbjct: 35 NVRAVLVP-ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVL 93
Query: 189 APTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHL 248
APTRELA+Q+EKE+K S T V GG + Q+S L GV++VV TPGR ID +
Sbjct: 94 APTRELAKQVEKEIK---ESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLI 150
Query: 249 QQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKE 308
+ + L + ++VLDEAD+ML +GFE + I+ NLP K Q++LFSATMP +++L+++
Sbjct: 151 EGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARK 210
Query: 309 YLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDR-LLGLLVEEASQAEKCGHPFPLTIV 367
YL +P+ + + L ++ R +L L+ ++ K TIV
Sbjct: 211 YLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGK-------TIV 263
Query: 368 FVERKTRCDDVSEALVAQGRT--------QSEREAALRDFRSGSTSILVATDVASRGLDV 419
F + K D+VS AL T Q +RE L FR G ++LVATDVASRGLD+
Sbjct: 264 FTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDI 323
Query: 420 TGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIA 473
V VI+ +LP E +VHR GRTGRAG G + +T V ++++ +
Sbjct: 324 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVG 377
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F + L P++ I Y PT IQ + MP+ LSG D++ A TGSGKTAAF IPM++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 171 CLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSEL 230
P G AL+L+PTR+LA+Q K K + + +++VGG ++E Q EL
Sbjct: 90 LKQHVP---QGGVRALILSPTRDLAEQTLKFTKELGK-FTDLRVSLLVGGDSMEDQFEEL 145
Query: 231 RAGVEIVVATPGRFIDHLQQ-GNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKH 289
G ++++ATPGR + L + + +L + +VV DEAD + MGF Q+ +I+ L E
Sbjct: 146 TKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENR 205
Query: 290 QTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLV 349
QTLLFSAT+P + E +K L P V++ + + ++ + + V EK LL L+
Sbjct: 206 QTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVR 265
Query: 350 EEASQAEKCGHPFPLTIVFVERKT---------RCDDVSEALVAQGRTQSEREAALRDFR 400
E S ++ T++FV K + +++ ++ Q R+ + FR
Sbjct: 266 EHISSDQQ-------TLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFR 318
Query: 401 SGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDR 460
+ T +L+ TD+A+RG+D+ + +VIN D P + +VHR+GR RAG TG + SF T
Sbjct: 319 ARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPE 378
Query: 461 DM 462
DM
Sbjct: 379 DM 380
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 202/356 (56%), Gaps = 26/356 (7%)
Query: 131 RPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAP 190
+PT +Q +P L+GRD+LG A+TGSGKTAAF +P++ H LA+ P G ALV+ P
Sbjct: 80 KPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPIL-HRLAEDPY----GVFALVVTP 134
Query: 191 TRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQ 250
TRELA Q+ ++ KA L + + +++VGG ++ Q L + IV+ TPGR I L +
Sbjct: 135 TRELAFQLAEQFKALGSCL-NLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGR-IKVLLE 192
Query: 251 GNTSL----SRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELS 306
N + SR F+VLDEADR+LD+GF+ ++R I + LP+ QTLLFSATM ++ L
Sbjct: 193 NNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALL 252
Query: 307 KEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTI 366
+ + + ++Q + ++ K L+ +L SQ E G +
Sbjct: 253 EHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHIL----SQMEDKG--IRSAM 306
Query: 367 VFVERKTRCDDVSEAL---------VAQGRTQSEREAALRDFRSGSTSILVATDVASRGL 417
+FV C +S L + +QS R +AL F+SG IL+ATDVASRGL
Sbjct: 307 IFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGL 366
Query: 418 DVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIA 473
D+ V VIN D+P+ DYVHR+GRT RAG GL+ S T+ D+ L+ I++ +
Sbjct: 367 DIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVG 422
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 211/374 (56%), Gaps = 34/374 (9%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
E+F M L ++++ + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 39 ESFDAMGLQENLLRG-----FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 169 QHC---LAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q L Q ALVLAPTRELAQQIEK ++A L K VGGT++ +
Sbjct: 94 QQLDFSLIQCQ--------ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRE 144
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L+AGV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 145 DQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLL 204
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLL 345
P K Q +FSATMP E E+++++++ PV++ V + + Q V V + E L
Sbjct: 205 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETL 264
Query: 346 GLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAAL 396
L E + + +++FV + + D +++ + ++ T Q+ R+ +
Sbjct: 265 CDLYETLAITQ--------SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 316
Query: 397 RDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +F
Sbjct: 317 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 376
Query: 457 YTDRDMFLVANIKK 470
T D ++ +I+K
Sbjct: 377 VTRDDERMLFDIQK 390
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 213/375 (56%), Gaps = 36/375 (9%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
E+F M L ++++ + +P++IQ + + G D++ A++G+GKTA F ++
Sbjct: 39 ESFDAMGLQENLLRG-----FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 169 Q---HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
Q + L Q ALVLAPTRELAQQIEK ++A + K VGGT++ +
Sbjct: 94 QQLDYALLQCQ--------ALVLAPTRELAQQIEKVMRALG-DYQGVKVHACVGGTSVRE 144
Query: 226 QRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNL 285
+ L+AGV +VV TPGR D L++ + I VLDEAD ML GF+ QI +I + L
Sbjct: 145 DQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLL 204
Query: 286 PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKV-SENEKIDRL 344
P K Q +FSATMP E E+++++++ PV++ V + + Q V V E+ K++ L
Sbjct: 205 PPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETL 264
Query: 345 LGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---------QSEREAA 395
L A +++FV + + D +++ + ++ T Q+ R+
Sbjct: 265 CDLYETLA---------ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDII 315
Query: 396 LRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTS 455
+R+FRSGS+ +L+ TD+ +RG+DV VS VIN DLP E+Y+HRIGR+GR G G++ +
Sbjct: 316 MREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAIN 375
Query: 456 FYTDRDMFLVANIKK 470
F T D ++ +I+K
Sbjct: 376 FVTLDDQRMLFDIQK 390
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 209/382 (54%), Gaps = 29/382 (7%)
Query: 101 SPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQA-MPIALSGRDLLGCAETGSGK 159
+ D PI +F DM + +++ + + + +P++IQ +A MPI L GRD++ A++G+GK
Sbjct: 27 TTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPI-LQGRDVIAQAQSGTGK 85
Query: 160 TAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVG 219
T+ MI + Q AL+L+PTRELA Q EK ++A + + +G
Sbjct: 86 TS-----MIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANIQAHACIG 139
Query: 220 GTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIR 279
G ++ + +L GV +V TPGR D +++ + I ++LDE+D ML GF+ QI
Sbjct: 140 GNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIY 199
Query: 280 EIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENE 339
++ R LP Q L SAT+P EI E++ +++T PV++ V + + Q V V + E
Sbjct: 200 DVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEE 259
Query: 340 -KIDRLLGLL-VEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT--------- 388
K D L L +QA ++F K + D +SE + + T
Sbjct: 260 WKFDTLCDLYDTLTITQA----------VIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMP 309
Query: 389 QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAG 448
Q ER+A + +FRSG + +L+ TDV +RG+DV VS VIN DLP E Y+HRIGR+GR G
Sbjct: 310 QKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG 369
Query: 449 STGLSTSFYTDRDMFLVANIKK 470
G++ +F D+ ++ +I++
Sbjct: 370 RKGVAINFVKSDDIKILRDIEQ 391
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 204/375 (54%), Gaps = 27/375 (7%)
Query: 107 PIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIP 166
PI++F DM ++ +++ + + Y +P+ IQ +A+ L GRD++ A++G+GKT+ I
Sbjct: 20 PIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAIS 79
Query: 167 MIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQ 226
+ Q + R+ LVL+P+RELA Q EK ++A + + + +GG +I +
Sbjct: 80 VCQ--IVNISSRKVQ---VLVLSPSRELASQTEKTIQAIG-AHTNIQAHACIGGKSIGED 133
Query: 227 RSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLP 286
+L GV V TPGR D +++G+ + +VLDE+D ML G + QI ++ R LP
Sbjct: 134 IKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALP 193
Query: 287 EKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENE-KIDRLL 345
Q L SAT+P EI E++++++T PV++ V + Q V V + E K D L
Sbjct: 194 HDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLC 253
Query: 346 GLLVE-EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQG---------RTQSEREAA 395
L +QA I+F + + D ++E + + + Q ER+
Sbjct: 254 DLYGRLTINQA----------IIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDI 303
Query: 396 LRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTS 455
+ FRS + +L+A+DV +RG+DV VSHVIN D+P E Y+HRIGR GR G G++ +
Sbjct: 304 MNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAIN 363
Query: 456 FYTDRDMFLVANIKK 470
F DM + +I++
Sbjct: 364 FVKSSDMKDLKDIER 378
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 206/391 (52%), Gaps = 37/391 (9%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
DVTA G+ F D L ++ I + RP+ IQ +++PIAL+GRD+L A
Sbjct: 124 DVTATKGN--------EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARA 175
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESF 212
+ G+GKTAAF IP+++ I + + + A+++ PTRELA Q + K + L+
Sbjct: 176 KNGTGKTAAFCIPVLEK------IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLK-I 228
Query: 213 KTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDM 272
+ + GGT+++ L V ++V TPGR +D ++G L S +V+DEAD++L
Sbjct: 229 QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQ 288
Query: 273 GFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNL 332
F+P + ++ LPE Q L+FSAT PV +++ +LT+P + + + ++Q
Sbjct: 289 EFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELT-LKGITQFY 347
Query: 333 VKVSENEKIDRLLGLLVE-EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT--- 388
V E +KI L L + + +Q +I+F R + +++ + G +
Sbjct: 348 AFVEERQKIHCLNTLFSKLQINQ----------SIIFCNSVNRVELLAKKITELGYSCFY 397
Query: 389 ------QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIG 442
Q R DFR+G+ LV TD+ +RG+D+ V+ VIN D PK E Y+HR+G
Sbjct: 398 IHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVG 457
Query: 443 RTGRAGSTGLSTSFYTDRDMFLVANIKKAIA 473
R+GR G GL+ + T D F + I++ +
Sbjct: 458 RSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 206/391 (52%), Gaps = 37/391 (9%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
DVTA G+ F D L ++ I + RP+ IQ +++PIAL+GRD+L A
Sbjct: 124 DVTATKGN--------EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARA 175
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESF 212
+ G+GKTAAF IP+++ I + + + A+++ PTRELA Q + K + L+
Sbjct: 176 KNGTGKTAAFCIPVLEK------IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLK-I 228
Query: 213 KTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDM 272
+ + GGT+++ L V ++V TPGR +D ++G L S +V+DEAD++L
Sbjct: 229 QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQ 288
Query: 273 GFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNL 332
F+P + ++ LPE Q L+FSAT PV +++ +LT+P + + + ++Q
Sbjct: 289 EFQPSVEHLISFLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELT-LKGITQFY 347
Query: 333 VKVSENEKIDRLLGLLVE-EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT--- 388
V E +KI L L + + +Q +I+F R + +++ + G +
Sbjct: 348 AFVEERQKIHCLNTLFSKLQINQ----------SIIFCNSVNRVELLAKKITELGYSCFY 397
Query: 389 ------QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIG 442
Q R DFR+G+ LV TD+ +RG+D+ V+ VIN D PK E Y+HR+G
Sbjct: 398 IHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVG 457
Query: 443 RTGRAGSTGLSTSFYTDRDMFLVANIKKAIA 473
R+GR G GL+ + T D F + I++ +
Sbjct: 458 RSGRFGHLGLAVNLITYEDRFNLYRIEQELG 488
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 199/380 (52%), Gaps = 35/380 (9%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
DVTA G+ F D L +++ I + +P+ IQ +++PIAL+G D+L A
Sbjct: 147 DVTATKGN--------EFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARA 198
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFK 213
+ G+GKT AF IP ++ + + + A++L PTRELA Q + K S+ L+ +
Sbjct: 199 KNGTGKTGAFCIPTLEKIDPENNVIQ-----AVILVPTRELALQTSQVCKELSKYLK-IE 252
Query: 214 TAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMG 273
+ GGT++ L V ++V TPGR +D ++G L + +V+DEAD++L +
Sbjct: 253 VMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVE 312
Query: 274 FEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLV 333
F+P I E+++ LPE Q L+FSAT PV ++ YL P + + + V+Q
Sbjct: 313 FQPSIEELIQFLPESRQILMFSATFPVTVKSFKDRYLKKPYIINLMDQLT-LMGVTQYYA 371
Query: 334 KVSENEKIDRLLGLLVE-EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---- 388
V E +K+ L L + + +Q +I+F R + +++ + G +
Sbjct: 372 FVEERQKVHCLNTLFSKLQINQ----------SIIFCNSVNRVELLAKKITELGYSCFYI 421
Query: 389 -----QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGR 443
Q R DFR+G+ LV TD+ +RG+D+ V+ VIN D P+T E Y+HR+GR
Sbjct: 422 HAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGR 481
Query: 444 TGRAGSTGLSTSFYTDRDMF 463
+GR G GL+ + T D F
Sbjct: 482 SGRFGHLGLAVNLVTYEDRF 501
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 189/351 (53%), Gaps = 26/351 (7%)
Query: 138 QAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCL---AQPPIRRGDGPLALVLAPTREL 194
QA+P AL+G+ LL A+TGSGKTA+F +P+I C ++ P + PLA+VLAPTREL
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTREL 61
Query: 195 AQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTS 254
Q+E + K + L FKTA+VVGG + Q ++ GVE+++ TPGR +D L +
Sbjct: 62 CVQVEDQAKMLGKGL-PFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIE 120
Query: 255 LSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPV 314
L I VLDE D ML GF Q+ +I + L + Q LLFSAT+ E+E++ +
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-QVLLFSATISREVEKVGGSLAKEII 179
Query: 315 QVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTR 374
V +G + P V+Q + V +K +L +L + H P +V+V +
Sbjct: 180 LVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQ-------NHFKPPAVVYVSSRVG 232
Query: 375 CDDVSEAL-VAQG---------RTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSH 424
D ++ A+ V G + ER + F G +LV+T V RG+D+ V
Sbjct: 233 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 292
Query: 425 VINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYT--DRDMF--LVANIKKA 471
VI D+P T+++Y+H IGR R G G + F DR++F LVA +K +
Sbjct: 293 VIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSS 343
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 185/341 (54%), Gaps = 24/341 (7%)
Query: 135 IQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRR-----GDGPLALVLA 189
IQA + L G DL+G A TG GKT AF +P+++ + P + G P LVL
Sbjct: 122 IQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLL 181
Query: 190 PTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQ 249
PTRELA+Q+ + A+ SL + + GG + Q +L+ GV+IVV TPGR DH++
Sbjct: 182 PTRELAKQVAADFDAYGGSL-GLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIE 240
Query: 250 QGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPE--KHQTLLFSATMPVEIEELSK 307
+ N S + F VLDEAD ML MGF + I+ + + K QTLLFSAT+P ++ +S
Sbjct: 241 RQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVEDSTKVQTLLFSATLPSWVKNISN 300
Query: 308 EYLTSPVQV--KVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLT 365
+L + VG +N +++ + RL+ ++ C T
Sbjct: 301 RFLKRDQKTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIIS-------CYSSGGQT 353
Query: 366 IVFVERKTRCDDVSEALVAQGRT------QSEREAALRDFRSGSTSILVATDVASRGLDV 419
I+F E K + ++S L+ R QS+RE L FR+G + LVAT+VA+RGLD+
Sbjct: 354 IIFAETKVQVSELS-GLLDGSRALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDI 412
Query: 420 TGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDR 460
V +I + P+ +E Y+HR GRTGRAG+TG++ + Y R
Sbjct: 413 NDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSR 453
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 208/381 (54%), Gaps = 31/381 (8%)
Query: 103 DAPTPIETFTDMC----LHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSG 158
+ P P+++F ++ I++++A + PT IQ QA+PI LSGR+ CA TGSG
Sbjct: 131 NIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSG 190
Query: 159 KTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVV 218
KT AF PM+ L +P DG A++L+P RELA Q +E K + +F ++
Sbjct: 191 KTFAFICPMLIK-LKRPST---DGIRAVILSPARELAAQTAREGKKLIKG-SNFHIRLMT 245
Query: 219 GGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQI 278
S+L +++++TP R ++ LS++ ++VLDE+D++ + QI
Sbjct: 246 KPLVKTADFSKL--WCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQI 303
Query: 279 REIMRNL--PEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVS 336
+++ P ++L FSAT+P +EEL++ + V+V +G+ ++ + V Q LV
Sbjct: 304 DCVVKACSNPSIIRSL-FSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAG 362
Query: 337 ENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTR---------CDDVSEALVAQGR 387
E +LL L S AE P ++FV+ K R C+++ ++
Sbjct: 363 SEE--GKLLAL---RQSFAESLNPP---VLIFVQSKERAKELYDELKCENIRAGVIHSDL 414
Query: 388 TQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRA 447
ERE A+ FR+G +L+ATDV +RG+D G++ VIN D P + Y+HRIGR+GRA
Sbjct: 415 PPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRA 474
Query: 448 GSTGLSTSFYTDRDMFLVANI 468
G +G + +FYT++D+ + NI
Sbjct: 475 GRSGEAITFYTEQDVPFLRNI 495
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 198/380 (52%), Gaps = 35/380 (9%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
DVTA G+ F D L ++K I + +P+ IQ +++PIAL+G D+L A
Sbjct: 117 DVTATKGN--------EFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARA 168
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFK 213
+ G+GKT AF IP+++ + + A++L PTRELA Q + K S+ L + +
Sbjct: 169 KNGTGKTGAFCIPVLEKIDPNNNVIQ-----AMILVPTRELALQTSQVCKELSKYL-NIQ 222
Query: 214 TAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMG 273
+ GGT++ L V ++V TPGR +D ++G L + +V+DEAD++L
Sbjct: 223 VMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAE 282
Query: 274 FEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLV 333
F+P + E+++ LP+ Q L+FSAT PV ++ +L P + + + V+Q
Sbjct: 283 FQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLT-LMGVTQYYA 341
Query: 334 KVSENEKIDRLLGLLVE-EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---- 388
V E +K+ L L + + +Q+ I+F R + +++ + G +
Sbjct: 342 FVEERQKVHCLNTLFSKLQINQS----------IIFCNSVNRVELLAKKITELGYSCFYI 391
Query: 389 -----QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGR 443
Q R +FR+G+ LV TD+ +RG+D+ V+ VIN D P+T E Y+HR+GR
Sbjct: 392 HAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGR 451
Query: 444 TGRAGSTGLSTSFYTDRDMF 463
+GR G GL+ + T D F
Sbjct: 452 SGRFGHLGLAVNLVTYEDRF 471
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 198/380 (52%), Gaps = 35/380 (9%)
Query: 94 DVTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCA 153
DVTA G+ F D L ++K I + +P+ IQ +++PIAL+G D+L A
Sbjct: 117 DVTATKGN--------EFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARA 168
Query: 154 ETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFK 213
+ G+GKT AF IP+++ + + A++L PTRELA Q + K S+ L + +
Sbjct: 169 KNGTGKTGAFCIPVLEKIDPNNNVIQ-----AMILVPTRELALQTSQVCKELSKYL-NIQ 222
Query: 214 TAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMG 273
+ GGT++ L V ++V TPGR +D ++G L + +V+DEAD++L
Sbjct: 223 VMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAE 282
Query: 274 FEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLV 333
F+P + E+++ LP+ Q L+FSAT PV ++ +L P + + + V+Q
Sbjct: 283 FQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLT-LMGVTQYYA 341
Query: 334 KVSENEKIDRLLGLLVE-EASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRT---- 388
V E +K+ L L + + +Q+ I+F R + +++ + G +
Sbjct: 342 FVEERQKVHCLNTLFSKLQINQS----------IIFCNSVNRVELLAKKITELGYSCFYI 391
Query: 389 -----QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGR 443
Q R +FR+G+ LV TD+ +RG+D+ V+ VIN D P+T E Y+HR+GR
Sbjct: 392 HAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGR 451
Query: 444 TGRAGSTGLSTSFYTDRDMF 463
+GR G GL+ + T D F
Sbjct: 452 SGRFGHLGLAVNLVTYEDRF 471
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 193/359 (53%), Gaps = 28/359 (7%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 171 CLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSE 229
P G + ALVL TRELA QI E FS L K ++ GG NI+ +
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 230 LRAGV-EIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLD-MGFEPQIREIMRNLPE 287
L+ IVV TPGR + ++ + SL + +LDE D+ML+ + ++EI + P
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 288 KHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN-VSQNLVKVSENEKIDRLLG 346
Q ++FSAT+ EI + K+++ P+++ V + T + + Q+ +K+SE EK +R L
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEK-NRKLN 280
Query: 347 LLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVA---------QGRTQSEREAALR 397
L++ F ++FV+ +R ++++ LV G +Q ER +
Sbjct: 281 DLLDALD--------FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
Query: 398 DFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
F+ G ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ GL+ +F
Sbjct: 333 SFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 391
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 193/359 (53%), Gaps = 28/359 (7%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 171 CLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSE 229
P G + ALVL TRELA QI E FS L K ++ GG NI+ +
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 230 LRAGV-EIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLD-MGFEPQIREIMRNLPE 287
L+ IVV TPGR + ++ + SL + +LDE D+ML+ + ++EI + P
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 288 KHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN-VSQNLVKVSENEKIDRLLG 346
Q ++FSAT+ EI + K+++ P+++ V + T + + Q+ +K+SE EK +R L
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEK-NRKLN 280
Query: 347 LLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVA---------QGRTQSEREAALR 397
L++ F ++FV+ +R ++++ LV G +Q ER +
Sbjct: 281 DLLDALD--------FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYK 332
Query: 398 DFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
F+ G ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ GL+ +F
Sbjct: 333 SFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 391
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 204/397 (51%), Gaps = 39/397 (9%)
Query: 108 IETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 167
+E F ++ L +M + PT IQ +P + + ++ + TGSGKT A+ +P+
Sbjct: 111 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 170
Query: 168 IQ-------HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGG 220
+Q + + RR P +VL PTREL++Q+ + K+ S F++ +V GG
Sbjct: 171 VQLMREDEANLGKKTKPRR---PRTVVLCPTRELSEQVYRVAKSISHHAR-FRSILVSGG 226
Query: 221 TNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIRE 280
+ I Q L +++VV TPGR + H+++GN I+++VLDEAD M D GF P+IR+
Sbjct: 227 SRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRK 286
Query: 281 IMRNLPEK--------HQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNL 332
+ L ++ QT+L +ATM + +++L E ++ + N +
Sbjct: 287 FLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDF 346
Query: 333 VKVSENE-KIDRLLGLLVEEASQAEKCGHPFPLTIVFVE--RKTRCDD--VSEALVA--- 384
+K+S E K++ LL +L ++ K +VF +R D +SE ++
Sbjct: 347 IKLSGGEDKLEALLQVLEPSLAKGSKV-------MVFCNTLNSSRAVDHYLSENQISTVN 399
Query: 385 -QGRTQSE-REAALRDFR--SGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHR 440
G +E R L+ F+ G LV TD+A+RGLD+ V HV+ D PK DY+HR
Sbjct: 400 YHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHR 458
Query: 441 IGRTGRAGSTGLSTSFYTDRDMFLVANIKKAIADAES 477
GRT R G+ G TS + +D L A I++A+ + ES
Sbjct: 459 TGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRNNES 495
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 199/381 (52%), Gaps = 33/381 (8%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
+TF + L + K I + R T IQA+A+P + G D+LG A TGSGKT AF IP +
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213
Query: 169 QHCLAQPPIRRGDGPLALVLAPTRELAQQ---IEKEVKAFSRSLESFKTAIVVGGTNIEK 225
+ L + +G LV+ PTRELA Q + KE+ + S V+GG EK
Sbjct: 214 E-LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKY----HSQTVGKVIGG---EK 265
Query: 226 QRSE---LRAGVEIVVATPGRFIDHLQQGNTSLSR-ISFVVLDEADRMLDMGFEPQIREI 281
+++E L GV ++VATPGR +DHL+ N + + + F+V+DEADR+L+ FE +++I
Sbjct: 266 RKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKI 325
Query: 282 MRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENE 339
+ LP+ QT LFSAT ++E+L++ LTSPV + V + TN + Q V
Sbjct: 326 LNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAM 385
Query: 340 KIDRLLGLLVEEASQAEKCGHPFPLTI--------VFVERKTRCDDVSEALVAQGRTQSE 391
++ LL L + Q +K F T +F K C ++ G Q++
Sbjct: 386 RLLFLLTFL--KRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIR-----GGIDQNK 438
Query: 392 REAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRA-GST 450
R F T IL+ T+VA+RGLD V ++ D P DY+HR+GRT R G+
Sbjct: 439 RTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAK 498
Query: 451 GLSTSFYTDRDMFLVANIKKA 471
G + T +++ + +K A
Sbjct: 499 GKALLVLTPQELKFIQYLKAA 519
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 195/397 (49%), Gaps = 30/397 (7%)
Query: 95 VTAPSGSPDAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAE 154
VT + + D+ F L P +K I + T +Q +P+ L G+D+L A+
Sbjct: 66 VTQIAKTSDSYLSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAK 125
Query: 155 TGSGKTAAFTIPMIQHCLAQPPIRRGDGP---LALVLAPTRELAQQIEKEVKAFSRSLES 211
TG+GKT AF +P I+ + PP R + + LV+ PTRELA Q E + S
Sbjct: 126 TGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPS 185
Query: 212 FKTAIVVGGTNI-EKQRSELRAGVEIVVATPGRFIDHLQQGN---TSLSRISFVVLDEAD 267
+V+GGT + +QR ++ +I+VATPGR DH+ + T L + +VLDEAD
Sbjct: 186 IGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEAD 245
Query: 268 RMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYL------TSPVQVKVGKV 321
+LDMGF +I I+ +P++ QT LFSAT+ E+ ++ L + VQ G+
Sbjct: 246 HLLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGET 305
Query: 322 SSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEA 381
VSQ + S + L GLL + + + G+ I+F V++
Sbjct: 306 HQ---KVSQMYMIASLDRHFSLLYGLLKKHIT--DNVGYK---VIIFCTTAMVTRLVADL 357
Query: 382 L---------VAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPK 432
L + + QS R +FR + ILV +DV++RG+D VS V+ + LP
Sbjct: 358 LGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPS 417
Query: 433 TMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIK 469
E Y+HR+GRTGR G G + + ++++K
Sbjct: 418 DREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFLSSVK 454
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 184/375 (49%), Gaps = 18/375 (4%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F L P +K I Y T +Q +PI L G+D+L A+TG+GKT AF +P I+
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 171 CLAQPPIRRGDGP---LALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQR 227
+ PP + LALV+ PTRELA Q E + S +V+GGT + ++
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 228 SELRAG-VEIVVATPGRFIDHLQQG---NTSLSRISFVVLDEADRMLDMGFEPQIREIMR 283
++ +I+VATPGR DH++ T L + +VLDEAD +LDMGF I I+
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIIS 501
Query: 284 NLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDR 343
+P++ QT LFSAT+P E+ ++ L + V V T Q + ++ +DR
Sbjct: 502 AVPKERQTFLFSATVPEEVRQICLVALRRDHEF-VNCVHEGTIETHQQVRQMHMIASLDR 560
Query: 344 LLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL---------VAQGRTQSEREA 394
LL + G+ IVF V++ L + + QS R
Sbjct: 561 HFSLLYTLLRE-HIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTR 619
Query: 395 ALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLST 454
+FR ILV +DV++RG+D V+ V+ + LPK E Y+HR+GRTGR G G
Sbjct: 620 VSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGI 679
Query: 455 SFYTDRDMFLVANIK 469
+ + ++++K
Sbjct: 680 LLLAPWEEYFLSSLK 694
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 172/323 (53%), Gaps = 6/323 (1%)
Query: 133 TSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTR 192
T IQA ++ L G+D+LG A TGSGKT AF IP ++ L + +G +V+ PTR
Sbjct: 113 TQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE-LLFKERFSPRNGTGVIVICPTR 171
Query: 193 ELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGN 252
ELA Q + + + S ++V+GG N + + +G +V+ATPGR +DHLQ
Sbjct: 172 ELAIQTKNVAEELLKH-HSQTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTK 230
Query: 253 TSLSR-ISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLT 311
+ + + +V+DEADR+L+ FE + +I++ LP+ QT LFSAT ++++L++ LT
Sbjct: 231 AFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQTSKVKDLARVSLT 290
Query: 312 SPVQVKVGKVSSPTTN--VSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFV 369
SPV V V TN + Q V +++ L+ L + ++ ++ F
Sbjct: 291 SPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFH 350
Query: 370 ERKTRCDDVSEALVAQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLD 429
+ DV + + G Q+ R DF IL+ TDVA+RGLD+ V +I D
Sbjct: 351 TEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYD 410
Query: 430 LPKTMEDYVHRIGRTGRA-GSTG 451
P +Y+HR+GRT R G+ G
Sbjct: 411 PPDKPTEYIHRVGRTARGEGAKG 433
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 188/378 (49%), Gaps = 24/378 (6%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F L P +K I + T +Q +PI L G+D+L A+TG+GKT AF +P I+
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 171 CLAQPPIRRGDGP---LALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQR 227
+ PP R + LV+ PTRELA Q E + S +V+GGT + ++
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQ 503
Query: 228 SELRAG-VEIVVATPGRFIDHLQQGN---TSLSRISFVVLDEADRMLDMGFEPQIREIMR 283
++ +I+VATPGR DH++ + T L + +VLDEAD +LDMGF I I+
Sbjct: 504 RRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA 563
Query: 284 NLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDR 343
+P++ QT LFSAT+P E+ ++ L + + V + Q + ++ +DR
Sbjct: 564 AVPKQRQTFLFSATVPEEVRQICHVALKRDHEF-INCVQEGSGETHQKVTQMYMIASLDR 622
Query: 344 ---LLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEAL---------VAQGRTQSE 391
LL +L++E A+ + I+F V++ L + + QS
Sbjct: 623 HFSLLHVLLKE-HIADNVDYK---VIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSY 678
Query: 392 REAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTG 451
R +FR ILV +DV++RG+D VS V+ + LP E Y+HR+GRTGR G G
Sbjct: 679 RTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEG 738
Query: 452 LSTSFYTDRDMFLVANIK 469
+ + ++++K
Sbjct: 739 EGVLLLAPWEEYFMSSVK 756
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 193/400 (48%), Gaps = 69/400 (17%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 171 CLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSE 229
P G + ALVL TRELA QI E FS L K ++ GG NI+ +
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 230 LRAGV-EIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLD-MGFEPQIREIMRNLPE 287
L+ IVV TPGR + ++ + SL + +LDE D+ML+ + ++EI + P
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 288 KHQTLLFSATMPVEIEELSKEYL------------------------------------- 310
Q ++FSAT+ EI + K+++
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLN 281
Query: 311 ----TSPVQVKVGKVSSPTTN-VSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLT 365
P+++ V + T + + Q+ +K+SE EK +R L L++ F
Sbjct: 282 VPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEK-NRKLNDLLDALD--------FNQV 332
Query: 366 IVFVERKTRCDDVSEALVA---------QGRTQSEREAALRDFRSGSTSILVATDVASRG 416
++FV+ +R ++++ LV G +Q ER + F+ G ILVATD+ RG
Sbjct: 333 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRG 392
Query: 417 LDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
+D+ V+ VIN D+P + + Y+HR+GR GR G+ GL+ +F
Sbjct: 393 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 432
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 172/322 (53%), Gaps = 28/322 (8%)
Query: 148 DLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFS 206
D++ A++G GKTA F + +Q P G + ALVL TRELA QI E FS
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSP------GQVSALVLCHTRELAYQICNEFVRFS 55
Query: 207 RSLESFKTAIVVGGTNIEKQRSELRAGV-EIVVATPGRFIDHLQQGNTSLSRISFVVLDE 265
L K ++ GG NI+ + L+ IVV TPGR + ++ + SL + +LDE
Sbjct: 56 TYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 115
Query: 266 ADRMLD-MGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSP 324
D+ML+ + ++EI + P Q ++FSAT+ EI + K+++ P+++ V +
Sbjct: 116 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 175
Query: 325 TTN-VSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALV 383
T + + Q+ +K+SE EK +L LL F ++FV+ +R ++++ LV
Sbjct: 176 TLHGLVQHYIKLSEMEKNRKLNDLLD---------ALDFNQVVIFVKSVSRAAELNKLLV 226
Query: 384 A---------QGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTM 434
G +Q ER + F+ G ILVATD+ RG+D+ V+ VIN D+P +
Sbjct: 227 ECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSA 286
Query: 435 EDYVHRIGRTGRAGSTGLSTSF 456
+ Y+HR+GR GR G+ GL+ +F
Sbjct: 287 DTYLHRVGRAGRFGTKGLAITF 308
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 183/345 (53%), Gaps = 33/345 (9%)
Query: 133 TSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQ---HCLAQPPIRRGDGPLALVLA 189
T +QA+ +P S +D++ A TGSGKT AF +P I+ + PP + + ++++
Sbjct: 40 TPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPP--KPHQVMGVIIS 97
Query: 190 PTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRA-GVEIVVATPGRFIDHL 248
PTREL+ QI K + F +L + + ++VGG +E + L G +++ TPGR D +
Sbjct: 98 PTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPGRLSDMM 157
Query: 249 QQGN-TSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSK 307
++ + ++LDEADR+LDMGF+ Q+ I+ LP++ +T LFSAT + +L+K
Sbjct: 158 KRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAK 217
Query: 308 EYLTSPVQVKVGKVSSPTTN--VSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLT 365
L + ++V G S T+ + +K ++K +L+ LL+E ++ L
Sbjct: 218 AGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVHLLIENKNKK--------LV 269
Query: 366 IVFVERKTRCDDVSEALVAQGRT--------------QSEREAALRDFRSGSTSILVATD 411
+ F+ C D ++++ T Q R+ AL F S+ +L+ TD
Sbjct: 270 VFFM--TCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTD 327
Query: 412 VASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
VA+RGLD+ G+ +V+ D P+ + ++HR+GRT R G + F
Sbjct: 328 VAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVF 372
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 37/384 (9%)
Query: 108 IETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 167
+ F + + + + +Y T +Q+ A+P AL GRD+LG A TGSGKT AF IP+
Sbjct: 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPI 129
Query: 168 IQHCLAQPPIRRGDGPLALVLAPTRELAQQ---IEKEVKAFSRSLESFKTAIVVGG---T 221
++ L + DG ++++PTRELA Q + +V F + F +++GG
Sbjct: 130 LEK-LHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHK----FSAGLLIGGREGV 184
Query: 222 NIEKQRSELRAGVEIVVATPGRFIDHLQQG-NTSLSRISFVVLDEADRMLDMGFEPQIRE 280
++EK+R + I+V PGR + H+ + N ++ ++LDEADR+LD F+ Q+
Sbjct: 185 DVEKERVH---EMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDP 241
Query: 281 IMRNLPEKHQTLLFSATMPVEIEELSKEYLTSP--VQVKVGKVSSPTTNVSQNLVKVSEN 338
I+ LP+ QTLLFSAT ++++L++ L P + V V++ T++ Q ++ V
Sbjct: 242 IISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVE 301
Query: 339 EKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVA----------QGRT 388
+K+D L + H +VF+ K + V EA G+
Sbjct: 302 KKLDMLWSFI---------KTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKM 352
Query: 389 QSEREAALRDFRSGSTSILVATDVASRGLDV-TGVSHVINLDLPKTMEDYVHRIGRTGRA 447
E+ + S+L TDV +RGLD V V+ +D P+ + Y+HR+GRT R
Sbjct: 353 SQEKRMGVYSQFIERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARF 412
Query: 448 GSTGLSTSFYTDRDMFLVANIKKA 471
+ G S F T + ++ +++A
Sbjct: 413 YTQGKSLLFLTPSEEKMIEKLQEA 436
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 202/449 (44%), Gaps = 103/449 (22%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIA-LSGRDLLGCAETGSGKTAAFTIPMIQ 169
++ M LHP +MK I ++ PT IQ +A G+D++G AETGSGKT AF +P++Q
Sbjct: 192 WSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQ 251
Query: 170 HCL--------------AQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESFKT 214
L + DG L AL++ PTRELA Q+ + ++ +++L S K
Sbjct: 252 RLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNL-SVKV 310
Query: 215 AIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGN---TSLSRISFVVLDEADRMLD 271
+VGG EKQ L+ EIVVATPGR + + G L +SF VLDEADRM++
Sbjct: 311 VPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVE 370
Query: 272 MGFEPQIREIMRNLP------------------------EKHQTLLFSATMPVE------ 301
G +++ I+ LP +K QT +FSAT+ +
Sbjct: 371 RGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKK 430
Query: 302 ------------------IEELSKEYLTSPVQVKVGKVSSPTTNV-----SQNLVKVSEN 338
IE LS+ + ++ V + TT++ ++ +K E
Sbjct: 431 LKRGSSKSKQSSSGEVNSIEVLSER---AGMRDNVAIIDLTTTSILAPKIEESFIKCEEK 487
Query: 339 EKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQG---------RTQ 389
EK L +L H TIVF T +S L G Q
Sbjct: 488 EKDAYLYYIL---------SVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQ 538
Query: 390 SEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGS 449
R ++ FR+ IL+ATD+ +RG+D+ V +I+ LP + E YVHR GRT RA +
Sbjct: 539 RARLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFA 598
Query: 450 TGLS---------TSFYTDRDMFLVANIK 469
G S + FYT F + ++K
Sbjct: 599 DGCSIALIEPNETSKFYTLCKSFSMESVK 627
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 186/368 (50%), Gaps = 23/368 (6%)
Query: 103 DAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 162
D+ + F + C+ P +K ++ + T +Q + L G+D L A+TG+GK+ A
Sbjct: 369 DSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMA 428
Query: 163 FTIPMIQHCLAQPPIRRGDGPLA----LVLAPTRELAQQIEKEVKAFSRSLESFKTAIVV 218
F +P I+ L +G +A L+L PTRELA QI E KA ++ + ++
Sbjct: 429 FLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLI 488
Query: 219 GGTN--IEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRI---SFVVLDEADRMLDMG 273
GGT +++QR E +I++ATPGR +DH++ + SR+ ++DEAD +LD+G
Sbjct: 489 GGTRFRLDQQRLESEP-CQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLG 547
Query: 274 FEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQ----VKVGKVSSPTTNVS 329
F+ + +I+ LP + Q+LLFSAT+P E+ +S+ L + +G V + V
Sbjct: 548 FKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVET-HDKVK 606
Query: 330 QNLVKVSENEKIDRLLGLLVEEASQAEK------CGHPFPLTIVFVERKTRCDDVSEALV 383
Q+ + + LL E + C ++++ + +V E +
Sbjct: 607 QSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVRE--I 664
Query: 384 AQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGR 443
+ Q R +F+ + ILV +DV++RG++ V+ VI + +P E Y+HR+GR
Sbjct: 665 HARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGR 724
Query: 444 TGRAGSTG 451
TGR G G
Sbjct: 725 TGREGKGG 732
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 184/368 (50%), Gaps = 23/368 (6%)
Query: 103 DAPTPIETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAA 162
D+ + F + C+ P +K ++ + T +Q + L G+D L A+TG+GK+ A
Sbjct: 322 DSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMA 381
Query: 163 FTIPMIQHCLAQPPIRRGDGPLA----LVLAPTRELAQQIEKEVKAFSRSLESFKTAIVV 218
F +P I+ L +G +A L+L PTRELA QI E KA + + ++
Sbjct: 382 FLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLI 441
Query: 219 GGT--NIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRI---SFVVLDEADRMLDMG 273
GGT +++QR E +I++ATPGR +DH++ + SR+ ++DEAD +LD+G
Sbjct: 442 GGTRFKLDQQRLESEP-CQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLG 500
Query: 274 FEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQ----VKVGKVSSPTTNVS 329
F + +I+ LP + Q+LLFSAT+P E+ +S+ L + +G V + V
Sbjct: 501 FRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVET-HDKVR 559
Query: 330 QNLVKVSENEKIDRLLGLLVEEASQAEK------CGHPFPLTIVFVERKTRCDDVSEALV 383
Q+ + + LL E + C ++++ + +V E +
Sbjct: 560 QSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVRE--I 617
Query: 384 AQGRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGR 443
+ Q R +F+ + ILV +DV++RG++ V+ VI + +P E Y+HR+GR
Sbjct: 618 HARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGR 677
Query: 444 TGRAGSTG 451
TGR G G
Sbjct: 678 TGREGKGG 685
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 193/371 (52%), Gaps = 30/371 (8%)
Query: 111 FTDM--CLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
F+D+ L I++ + ++ T +QA +P+ S +D+ A TGSGKT AF +P++
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 169 Q---HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEK 225
+ + PP + + ++++PTREL+ QI + F +L + + ++VGG ++
Sbjct: 76 EILRRSTSFPP--KPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKA 133
Query: 226 QRSELRA-GVEIVVATPGRFIDHLQQGNT-SLSRISFVVLDEADRMLDMGFEPQIREIMR 283
+ G +++ TPGR D +++ + ++LDEADR+L+MGF+ Q+ I+
Sbjct: 134 DMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIIS 193
Query: 284 NLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKV-GKVSSPTTNVSQN----------L 332
LP++ +T LFSAT +EEL+K L +PV+V+V K S ++ N
Sbjct: 194 RLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEY 253
Query: 333 VKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVE-------RKTRCDDVSEALVAQ 385
++ ++K +L+ LL++ ++K F +T V+ + +S +
Sbjct: 254 MECEADKKSSQLVDLLIK---NSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHG 310
Query: 386 GRTQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTG 445
Q+ R+ AL F S+ L+ TDVA+RGLD+ G+ +V+ D P+ + HR GRT
Sbjct: 311 DMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTA 370
Query: 446 RAGSTGLSTSF 456
R G G + F
Sbjct: 371 RLGRQGRAIVF 381
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 177/383 (46%), Gaps = 45/383 (11%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
+TF ++ +MK + + RP IQA A + G+ + ++GSGKT A+ +P+I
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 169 Q---------HCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVG 219
Q H + P P +VL PT ELA Q+ ++ S+S F++ +V G
Sbjct: 434 QRLREEELQGHSKSSPGC-----PRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTG 488
Query: 220 GTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRML-DMGFEPQI 278
G Q L GV++++ATPGRF + +G LS + +LDE D + D FE +
Sbjct: 489 GFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAAL 548
Query: 279 REIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSEN 338
+ ++ + P Q L +AT+P+EI E V +V + + + LV S +
Sbjct: 549 QNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGD 608
Query: 339 EKIDRLLGLLVEEASQAEKCG-------HPFPLTIVFVERKTRCDDVSEALVAQGR---- 387
+ ++ E A Q +K +P TI+F + C V R
Sbjct: 609 DNAEK----TPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQ 664
Query: 388 ----------TQSEREAALRDFRSG----STSILVATDVASRGLDVTGVSHVINLDLPKT 433
+Q R +++F S ++ LV TD ASRG+D +GV HV+ D P+
Sbjct: 665 LHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRD 724
Query: 434 MEDYVHRIGRTGRAGSTGLSTSF 456
+YV R+GRT R G+ G +F
Sbjct: 725 PSEYVRRVGRTAR-GARGKGKAF 746
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 187/439 (42%), Gaps = 95/439 (21%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
++F ++ L S++ + ++ PT +Q+ A+P + G D + + TGSGKT A+ +P++
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 169 QHCLAQPPIRRGDGPLA------------------LVLAPTRELAQQIEKEVKAFSRSLE 210
GPLA +++AP+REL QI +EV+ +
Sbjct: 170 SEI----------GPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVH 219
Query: 211 SFKTAIVVGGTNIEKQRSELRAGV-EIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRM 269
+VGG N +Q L+ IVV TPGR + + G F+VLDE D +
Sbjct: 220 RRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDEL 279
Query: 270 LDMGFEPQIREIMRNLPEK--------------HQTLLFSATMPVEIEELSKEYLTSPVQ 315
L F I I+ ++ ++ QT+L SAT+P + +K + PV
Sbjct: 280 LSFNFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVL 339
Query: 316 VKVGKVS--------------SPTTNVSQNLVKVS----------------ENEKIDRLL 345
V+ KV+ +PTT+ + ++ + K+D L
Sbjct: 340 VQANKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTL- 398
Query: 346 GLLVEEASQAEKCGHPFPL--TIVFVERKTRCDDVSEALVAQGRTQSE---------REA 394
+C H I F+ + DV L A+G +E R
Sbjct: 399 ----------RRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRST 448
Query: 395 ALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLST 454
L+ F++G +LV ++++RGLDV V+NL+LP Y HR GRTGR G G
Sbjct: 449 VLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVV 508
Query: 455 SFYTDRDMFLVANIKKAIA 473
+ + +F+V ++K +
Sbjct: 509 TVCEESQVFIVKKMEKQLG 527
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 181/390 (46%), Gaps = 56/390 (14%)
Query: 109 ETFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMI 168
++F ++ L +++ + +PT IQ A+P L G+D++ A+TGSGKT A+ +P++
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 169 QHCLAQPPI-RRGDGPLALVLAPTRELAQQIEKEVKAFSRSLE-SFKTAIVVGGTNIEKQ 226
Q + + ++ P A +L P+REL QQ+ EV + K + +
Sbjct: 106 QKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDM 165
Query: 227 RSELRAGVEIVVATPGRFIDHLQQG---NTSLSR-ISFVVLDEADRMLDMGFEPQIREIM 282
R+ L EI+V+TP G T++S +S +VLDEAD +L G+E +R +
Sbjct: 166 RNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVT 225
Query: 283 RNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQVKV----GKVSSPTTNVSQNLVKVSEN 338
+P + Q LL SAT ++E+L K L +P+ + + K + +NV Q + S
Sbjct: 226 SIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQ 285
Query: 339 EKIDRLLGLLVEEASQAE------KCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQSER 392
+K+ +L LL E Q + F L + F+E+ + A++ Q+ R
Sbjct: 286 DKLLHILALLKLEVVQKKILIFINTIDMGFRLKL-FLEKF----GIKSAILNGELPQNSR 340
Query: 393 EAALRDFRSGSTSILVATDVAS-----------------------------------RGL 417
L F +G L+ATD S RG+
Sbjct: 341 LHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGI 400
Query: 418 DVTGVSHVINLDLPKTMEDYVHRIGRTGRA 447
D V VIN D+P+++ Y+HRIGRTGRA
Sbjct: 401 DFKKVHTVINFDMPQSVTGYIHRIGRTGRA 430
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 122/222 (54%), Gaps = 23/222 (10%)
Query: 129 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQ-PPIRRGDGPLALV 187
+ PT +QAQA+P+ LSGRD+L A TG+GKT A+ P+I H P + R G ALV
Sbjct: 50 FEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALV 109
Query: 188 LAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDH 247
+ PTREL Q+ + ++ V+GG K+++ LR G+ I++ATPGR +DH
Sbjct: 110 IVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDH 169
Query: 248 LQQGNTSLSR-ISFVVLDEADRMLDMGFEPQIREIMRNLPE----------------KHQ 290
L+ + + + + +V+ DEAD +L++G+ +I +I++ L + Q
Sbjct: 170 LKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQ 229
Query: 291 TLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNL 332
LL SAT+ ++ +L+K L PV + + T + QNL
Sbjct: 230 NLLLSATLNDKVNDLAKLSLDDPVMIGLD-----NTKLQQNL 266
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 389 QSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAG 448
Q +R +A F++ ++L++TDVA+RGLD V +I D P +YVHR+GRT R G
Sbjct: 385 QEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIG 444
Query: 449 STGLSTSFYTDRDMFLVANIKK 470
G + F ++ + +KK
Sbjct: 445 EKGEALLFLQPIEIDYLKELKK 466
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 176/379 (46%), Gaps = 43/379 (11%)
Query: 101 SPDAP-TPIETFTDMCLHPSIMKDIAYH-EYTRPTSIQAQAMPIALS--GRDLLGCAETG 156
S D P T F D+ L P +MK + ++ +P+ IQA ++P+ ++ + L+ A G
Sbjct: 82 SGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNG 141
Query: 157 SGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQ---IEKEVKAFSRSLESFK 213
SGKT F + M+ P +R P AL + PTRELA Q + +++ F+
Sbjct: 142 SGKTTCFVLGMLSRV--DPTLRE---PQALCICPTRELANQNMEVLQKMGKFTGITAELA 196
Query: 214 TAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDM- 272
G + + + A +V+ TPG + L+ + +V DEAD ML
Sbjct: 197 VPDSTRGAPAATRGAPVSA--HVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATD 254
Query: 273 GFEPQIREIMRNLPE---KHQTLLFSATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVS 329
GF +IM+++ Q LLFSAT +++ + P Q+ V + +V
Sbjct: 255 GFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVK 314
Query: 330 Q-NLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGR- 387
Q +V E KI+ + ++E + TI+FV+ K V +AL G
Sbjct: 315 QYKVVCPKEQNKIEVIKDQIMELGDIGQ--------TIIFVKTKASAQKVHKALAEMGYD 366
Query: 388 --------TQSEREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMED--- 436
T+S+R+ +++F+ T +L+ATDV +RG D V+ V+N +LP E
Sbjct: 367 VTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEP 426
Query: 437 ----YVHRIGRTGRAGSTG 451
Y+HR+GR GR G G
Sbjct: 427 DYEVYLHRVGRAGRFGRKG 445
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 156/314 (49%), Gaps = 55/314 (17%)
Query: 133 TSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQ---HCLAQPPIRRGDGPLALVLA 189
T +QA+ +P S +D++ A TGSGKT AF +P I+ + PP + + ++++
Sbjct: 41 TPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPP--KPHQVMGVIIS 98
Query: 190 PTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQ 249
PTREL+ QI K +A L+ K V N ++ G +++ TPGR D ++
Sbjct: 99 PTRELSAQIHKVARAVR--LDFAKCREVEADMNTLEEE-----GANLLIGTPGRLSDMMK 151
Query: 250 QGN-TSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEELSKE 308
+ + ++LDEADR+LDMGF+ Q+ I+ LP++ +T LFSAT + +L+K
Sbjct: 152 RMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKA 211
Query: 309 YLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVF 368
L +P +K ++K +L+ LL+E ++ L + F
Sbjct: 212 GLRNP------------------YLKCEADQKSSQLVHLLIENKNKK--------LVVFF 245
Query: 369 VERKTRCDDVSEALVAQ-------------GRT-QSEREAALRDFRSGSTSILVATDVAS 414
+ C D ++++ G+ Q R+ AL F S+ +L+ TDVA+
Sbjct: 246 M--TCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAA 303
Query: 415 RGLDVTGVSHVINL 428
RGLD+ G+ ++ +L
Sbjct: 304 RGLDIPGIVYIRSL 317
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 179/372 (48%), Gaps = 52/372 (13%)
Query: 129 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVL 188
+ PT IQ +A+P +GRD + A+TGSGKT + + + L P + A+++
Sbjct: 96 FVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFS--LINP---QRSSVQAVIV 150
Query: 189 APTRELAQQIEKEVKAFSRSLE-----SFKTAIVVGGTNIEKQRSELRAGV-EIVVATPG 242
PTREL Q+ K + + E A++ GGT + + +S L+A I+VAT
Sbjct: 151 VPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGT-LRRHKSWLKAEPPAILVATVA 209
Query: 243 RFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEP-QIREIMRNLP--EKHQTLLFSATMP 299
L++ + + +V+DE D + + +R+++ + +K QT+ SA++P
Sbjct: 210 SLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIP 269
Query: 300 VEIEELSKEYLTSPVQVKVGK----------------------VSSPTTNVSQNLVKVSE 337
K ++ +Q K K V TN Q L+ + E
Sbjct: 270 QH-----KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLE 324
Query: 338 NEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQ-SEREAAL 396
++ + + + E++ +++K G+ T++ KT E L+ +G + R A+L
Sbjct: 325 SDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASL 384
Query: 397 RDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
+ R G +LV+TD+A+RG+D+ +H+ N DLP+T+ DY+HR GR GR
Sbjct: 385 TEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKP-------- 436
Query: 457 YTDRDMFLVANI 468
++DR +VAN+
Sbjct: 437 FSDRKC-IVANL 447
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 9/203 (4%)
Query: 111 FTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 170
F D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 171 CLAQPPIRRGDGPL-ALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSE 229
P G + ALVL TRELA QI E FS L K ++ GG NI+ +
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 230 LRAGV-EIVVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLD-MGFEPQIREIMRNLPE 287
L+ IVV TPGR + ++ + SL + +LDE D+ML+ + ++EI + P
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 288 KHQTLLFSATMPVEIEELSKEYL 310
Q ++FSAT+ EI + K+++
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFM 244
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 246 DHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATMPVEIEEL 305
D L+ S+ SF V + R+ GF ++ + L+F + I E
Sbjct: 246 DFLENETVSVRLFSFGVENSEWRLCSFGFI-----VLVWVSMFRAILMFHS--KTHIFEE 298
Query: 306 SKEYLTSPVQVKVGKVSSPTTN-VSQNLVKVSENEKIDRLLGLLVEEASQAEKCGHPFPL 364
+ SP+++ V + T + + Q+ +K+SE EK +L LL F
Sbjct: 299 KRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLD---------ALDFNQ 349
Query: 365 TIVFVERKTRCDDVSEALVA---------QGRTQSEREAALRDFRSGSTSILVATDVASR 415
++FV+ +R ++++ LV G +Q ER + F+ G ILVATD+ R
Sbjct: 350 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGR 409
Query: 416 GLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSF 456
G+D+ V+ VIN D+P + + Y+HR+GR GR G+ GL+ +F
Sbjct: 410 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 450
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 185/424 (43%), Gaps = 89/424 (20%)
Query: 115 CLHPSIMKDIAYHEYTR--PTSIQAQAMPIALSG--RDLLGCAETGSGKTAAFTIPMIQH 170
CL+P + K + + P + I G RD+ + TGSGKT ++ +P++Q
Sbjct: 37 CLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQ- 95
Query: 171 CLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSEL 230
LA P+R ALV+ PTR+LA Q++ A + ++ VG ++I + S+L
Sbjct: 96 LLASRPVR---CLRALVVLPTRDLALQVKDVFDAIAPAV-GLSVGSAVGQSSIAGEISQL 151
Query: 231 ---------------------RAGVEIVVATPGRFIDHLQQGNT-SLSRISFVVLDEADR 268
+ V+I+VATPGR +DH+ +L + ++V+DE DR
Sbjct: 152 IKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDR 211
Query: 269 MLDMGFEPQIREIMRNLPEKHQTLL----------FSATMPVEIEELSKEYLTSPVQVKV 318
+L ++ + +++ +L F + V + + + + P V
Sbjct: 212 LLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLV 271
Query: 319 GKVSSPT-TNVSQNLVKVSEN---------------EKIDRLLGLLVE------------ 350
V S T T L+++ + EK++ L L+ E
Sbjct: 272 KMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLE-CLRLICETGMKPVYLVALL 330
Query: 351 EASQAEKCGHPFPLTIVF---VERKTR-CD--------DVSEALVAQGRTQSEREAALRD 398
++ + EKC I+F VE R C + + G QS R L+
Sbjct: 331 KSWEGEKC-------IIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKA 383
Query: 399 FRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYT 458
FR G +LVA+D +RG+DV GV++VIN D+P + ++HR GRT RAG G + +
Sbjct: 384 FRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLS 443
Query: 459 DRDM 462
+ ++
Sbjct: 444 NHEV 447
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 39/282 (13%)
Query: 192 RELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGV-EIVVATPGRFIDHLQQ 250
R LA + E +VK + A++ GGT + + +S L+A I+VAT L++
Sbjct: 8 RMLAAKSEIDVKGCT------VMALLDGGT-LRRHKSWLKAEPPAILVATVASLCHMLEK 60
Query: 251 GNTSLSRISFVVLDEADRMLDMGFEP-QIREIMRNLP--EKHQTLLFSATMPVEIEELSK 307
+ + +V+DE D + + +R+++ + +K QT+ SA++P K
Sbjct: 61 HIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQH-----K 115
Query: 308 EYLTSPVQVKVGK----------------------VSSPTTNVSQNLVKVSENEKIDRLL 345
++ +Q K K V TN Q L+ + E++ + +
Sbjct: 116 HFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAI 175
Query: 346 GLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQ-SEREAALRDFRSGST 404
+ E++ +++K G+ T++ KT E L+ +G + R A+L + R G
Sbjct: 176 IFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGG 235
Query: 405 SILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGR 446
+LV+TD+A+RG+D+ +H+ N DLP+T+ DY+HR GR GR
Sbjct: 236 FLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 279 REIMRNLPEKHQTLLFSATMPVEIEELS----KEYLTSPVQVKVGKVSSPTTNVSQNLVK 334
R + + Q + +AT+PV ++ + K V V + + + Q V+
Sbjct: 343 RRVRKIYTRSKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVE 402
Query: 335 VSENEKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQS---- 390
V+ + ++D L+ + + + F T+ VE D + +A + R
Sbjct: 403 VTVDSQVDALIEAVKNNNNTNTERTMVFANTVEAVE--AVADILEKASIQCYRYHKNHKL 460
Query: 391 -EREAALRDFRSGSTSILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGS 449
ER L DFR + + V TD A+RG+DV VSHVI D + D++HRIGRT RAG
Sbjct: 461 DERANILADFRE-TGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQ 519
Query: 450 TGLSTSFYTDRDMFLVANIKKAI 472
G TS YT+ + LV I++A+
Sbjct: 520 YGTVTSLYTEANRDLVEAIREAV 542
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 129 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH----CLAQPPIRRGDGP- 183
+ RP+ QA +P LSG+D++ AETGSGKT + P+I L R + P
Sbjct: 100 FDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPF 159
Query: 184 ----LALVLAPTRELAQQIEKEVKAFSRSLES--FKTAIVVGGTNIEKQRSELRAGVEIV 237
++L+L P L +Q+ + V + + V G + +I+
Sbjct: 160 PLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLP------DII 213
Query: 238 VATPGRFIDHLQQGNTS----LSRISFVVLDEADRMLDMGFEPQIREI--MRNLPEKHQT 291
V+TP +++++ L + +VV DEAD +L F+ QI + M EK +
Sbjct: 214 VSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVS 273
Query: 292 LLFSATM--PVEIE 303
L + + P+EI+
Sbjct: 274 RLAKSNLGRPMEID 287
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 145/346 (41%), Gaps = 50/346 (14%)
Query: 136 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 195
Q +A+ +SGRD TG GK+ + IP LA+P I LV++P L
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPA----LAKPGI-------VLVVSP---LI 86
Query: 196 QQIEKEVKAFSRSLESFKTAIVVGGTNIE-KQRSELRAG---VEIVVATP-----GRFID 246
+E +V A + + T+++ K +L +G V ++ TP F+
Sbjct: 87 ALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFML 146
Query: 247 HLQQGNTSLSRISFVVLDEADRMLDMG--FEPQIREI--MRNLPEKHQTLLFSATMPVEI 302
L++ + S ++ + +DEA + G F P R++ +R+ L +AT ++
Sbjct: 147 KLRKLH-SRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKV 205
Query: 303 EE--LSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSENEKIDRLLGLLVEEASQAEKCGH 360
++ + L +P+ +K + P + +N D LG L++ CG+
Sbjct: 206 QKDVIDSLNLRNPLVLK-SSFNRPNIFYEVRYKDLLDNAYTD--LGNLLKS------CGN 256
Query: 361 PFPLTIVFVERKTRCDD---------VSEALVAQGRTQSEREAALRDFRSGSTSILVATD 411
I++ +T CDD +S A G R L D+ S I+VAT
Sbjct: 257 I--CAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATV 314
Query: 412 VASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFY 457
G+D V V + ++PK+ME + GR GR S +Y
Sbjct: 315 AFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYY 360
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 143/357 (40%), Gaps = 62/357 (17%)
Query: 136 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELA 195
Q QA+ + L G + TG+GK+ + IP + I G + LV++P L
Sbjct: 274 QLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAM--------ILPG---ITLVVSPLVSLM 322
Query: 196 QQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSE--------LRAGV-EIVVATPGRF-- 244
K + +I+ GG QR E L+ G+ +++ +P R
Sbjct: 323 IDQLKHL-----------PSIIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLN 371
Query: 245 IDHLQQGNTSLSRISFVVLDEADRMLDM--GFEPQIREIMRNLPEKHQTLLFSATMPVEI 302
++ L SLS +S VV+DEA + + F P + ++LFS I
Sbjct: 372 VEFLSMFRMSLS-VSLVVVDEAHCVSEWSHNFRPSYMRL-------KASMLFSELKAECI 423
Query: 303 EELSKEYLTSPVQVKVGKVSSPTTNVSQNL---------VKVSENEKIDRLLGLLVEEAS 353
++ T +Q + + P+TN+ Q V +S ++ LL +L+E
Sbjct: 424 LAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLL-ILMESPP 482
Query: 354 QAE------KCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQSEREAALRDFRSGSTSIL 407
E C F + + R ++++ G +R F S ++
Sbjct: 483 YKEIRSIIVYCK--FQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVV 540
Query: 408 VATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFL 464
VAT GLD V VI+ +P +ME+YV IGR GR G FY D D +L
Sbjct: 541 VATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFY-DNDTYL 596
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 161/403 (39%), Gaps = 58/403 (14%)
Query: 93 LDVTAPSGSPDAPTPIETF-TDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLG 151
+DVT GS D F L + K H + RP Q + + +SG D+
Sbjct: 417 IDVTYTEGSNDKKWSSREFPWTRKLEVNNKKVFGNHSF-RPN--QREIINATMSGSDVFV 473
Query: 152 CAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQ-QIEKEVKA------ 204
TG GK+ + +P + C G + LV++P L Q QI ++A
Sbjct: 474 LMPTGGGKSLTYQLPALI-C----------GGITLVISPLVSLIQDQIMNLLQANIPAAS 522
Query: 205 FSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGRFIDHLQQGNTSLSRISFVVLD 264
S +E + + N E + +L VA + HL+ N S ++ V+D
Sbjct: 523 LSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLN-SRGLLARFVID 581
Query: 265 EADRMLDMG--FEPQ------IREIMRNLPEKHQTLLFSATMPVEIEELSKEYLTSPVQV 316
EA + G F P +++ N+P L +AT ++E + L V
Sbjct: 582 EAHCVSQWGHDFRPDYQSLGILKQKFPNIP----VLALTATATASVKEDVVQAL-GLVNC 636
Query: 317 KVGKVSSPTTNVSQNLVKVSEN--EKIDRLLGLLVEEASQAEKCGHPFPLTIVFVERKTR 374
V + S N+ ++V ++ E ID+ + + + ++CG I++ +
Sbjct: 637 VVFRQSFNRPNLWYSVVPKTKKCLEDIDKFI-----KENHFDECG------IIYCLSRMD 685
Query: 375 CDDVSEAL--------VAQGRTQSEREAALR-DFRSGSTSILVATDVASRGLDVTGVSHV 425
C+ VSE L G + E+ A ++ + +I+ AT G++ V V
Sbjct: 686 CEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFV 745
Query: 426 INLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANI 468
I+ LPK++E Y GR GR G +Y D V ++
Sbjct: 746 IHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHM 788
>AT5G08110.1 | Symbols: | nucleic acid binding;ATP-dependent
helicases;ATP binding;helicases;ATP-dependent helicases
| chr5:2594854-2600114 REVERSE LENGTH=1141
Length = 1141
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 134 SIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRE 193
S QA+A+ AL+G+++ T SGK+ + +P+ + + + AL L PT+
Sbjct: 396 SHQAEAISAALAGKNVAVATMTSSGKSLCYNVPVFEE------LCKDTNSCALYLFPTKA 449
Query: 194 LAQQIEKEVKAFSRSLESFKTAIVVG---GTNIEKQRSELRAGVEIVVATPGR-----FI 245
LAQ +++A S ++ F+ +I +G G K R+ LR+ +++ P
Sbjct: 450 LAQD---QLRALSDLIKGFEASINMGVYDGDTPYKDRTRLRSNARLLITNPDMLHISILR 506
Query: 246 DHLQQGNTSLSRISFVVLDEA 266
H +Q + LS + ++V+DEA
Sbjct: 507 RHKEQFSRILSNLRYIVIDEA 527
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 180 GDGPLALVLAPTRELAQQIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRA-GVEIVV 238
G+ P L L P++ A Q+ KA T + G ++ Q S L++ E +V
Sbjct: 194 GNSPFLLYLVPSQSKASQVRSVCKALKGI--GIHTVSLHQGAPLDHQISGLKSVEPEFIV 251
Query: 239 ATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREIMRNLPEKHQTLLFSATM 298
ATP R ++ + +S +S +V+DE + G+ ++ I + + KHQT++F+ +
Sbjct: 252 ATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSF 311
Query: 299 PVEIEELSKEYLTSPV-QVKVGK-VSSPTTNVSQNL-VKVSENEKIDRL 344
I + +L V +V V + V+S + ++Q + V SE +K+ +
Sbjct: 312 SASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKF 360
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 145/364 (39%), Gaps = 56/364 (15%)
Query: 131 RPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAP 190
RP Q + + +SG D+ TG GK+ + +P + C + LV++P
Sbjct: 471 RPN--QREIINATMSGCDVFVLMPTGGGKSLTYQLPALL-CAG----------ITLVISP 517
Query: 191 TRELAQ-------QIEKEVKAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIVVATPGR 243
L Q Q + S +E + ++ + EK + +L VA
Sbjct: 518 LVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSES 577
Query: 244 FIDHLQQGNTSLSRISFVVLDEADRMLDMG--FEPQ------IREIMRNLPEKHQTLLFS 295
+ HL+ N S S ++ V+DEA + G F P +++ N+P L +
Sbjct: 578 LLRHLEILN-SRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIP----MLALT 632
Query: 296 ATMPVEIEELSKEYLTSPVQVKVGKVSSPTTNVSQNLVKVSEN--EKIDRLLGLLVEEAS 353
AT ++E + L V V + S N+ ++V + E ID+ + +
Sbjct: 633 ATATTSVKEDVVQAL-GLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFI-----REN 686
Query: 354 QAEKCGHPFPLTIVFVERKTRCDDVSEALVAQGRTQS---------EREAALRDFRSGST 404
++CG I++ + C+ V+EAL G + +R + +
Sbjct: 687 HFDECG------IIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEI 740
Query: 405 SILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFL 464
+I+ AT G++ V VI+ LPK++E Y GR GR G +Y+ D
Sbjct: 741 NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIR 800
Query: 465 VANI 468
V ++
Sbjct: 801 VKHM 804
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 161/403 (39%), Gaps = 58/403 (14%)
Query: 93 LDVTAPSGSPDAPT----PIETFTDMCLHPSIMKDIAYHEY--TRPTSIQAQAMPIALSG 146
L A SGSP A + IE +++ S D+ ++ + ++ + Q + + ++G
Sbjct: 45 LKALAASGSPVASSGGSSAIENWSETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTG 104
Query: 147 RDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVKAFS 206
RD+L G GK+ + +P + G LV++P L Q + A
Sbjct: 105 RDVLVIMAAGGGKSLCYQLPAMLR-----------GGTTLVVSPLLSLIQDQVMGLAALG 153
Query: 207 RSLESFKTAIVVGGTNIEKQRSELRAG---VEIVVATP------GRFIDHLQQGNTSLSR 257
+ ++ G N + L G ++I+ TP RF+ L++ + + R
Sbjct: 154 --ISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCHNA-GR 210
Query: 258 ISFVVLDEADRMLDMG--FEPQIRE--IMRNLPEKHQTLLFSATMPVEIEELSKEYLTSP 313
+S + +DEA G F P + I++ K + +AT +++ E L P
Sbjct: 211 LSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIP 270
Query: 314 VQVK-VGKVSSPTTNVSQNLVKVSENEKIDRL----LGLLVEEASQAEKCGHPFPLTIVF 368
VK V V+ P S V E + +L + + E+ + G IV+
Sbjct: 271 KCVKFVSSVNRPNLFYS-----VREKSAVGKLVVDEIAEFIRESYSNNESG------IVY 319
Query: 369 VERKTRCD----DVSEALVAQGRTQSEREAALRD-----FRSGSTSILVATDVASRGLDV 419
+ C+ D+ E ++ ++ +A +R+ + ++V T G++
Sbjct: 320 CFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINK 379
Query: 420 TGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDM 462
V VI+ L K+ME Y GR GR G F+ D+
Sbjct: 380 PDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADV 422
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 358 CGHPFPLTIVFVERKTRCDD---------VSEALVAQGRTQSEREAALRDFRSGSTSILV 408
CG+ I++ +T CDD +S A G R L D+ S I+V
Sbjct: 161 CGNI--CAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIV 218
Query: 409 ATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFY 457
AT G+D V V + ++PK+ME + GR GR S +Y
Sbjct: 219 ATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYY 267