Miyakogusa Predicted Gene
- Lj6g3v0315170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0315170.1 Non Chatacterized Hit- tr|I3SNC8|I3SNC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,95.04,0,SYNBINDIN,NULL; SYNBINDIN,Sybindin-like protein;
SNARE-like,Longin-like domain; no description,NULL;,CUFF.57702.1
(141 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02280.1 | Symbols: | SNARE-like superfamily protein | chr5:... 264 1e-71
AT1G51160.2 | Symbols: | SNARE-like superfamily protein | chr1:... 64 4e-11
AT1G51160.1 | Symbols: | SNARE-like superfamily protein | chr1:... 64 4e-11
>AT5G02280.1 | Symbols: | SNARE-like superfamily protein |
chr5:469377-470129 FORWARD LENGTH=141
Length = 141
Score = 264 bits (675), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/141 (87%), Positives = 133/141 (94%)
Query: 1 MAAVYSLYIINKSGGLIYYKDYGSSGRMDTNDTLRVASLWHSMHAISQQLSPVSGCFGIE 60
MAA+YSLYIINKSGGLI+YKD G+ GRMDTND+LRVASLWHSMHAISQQLSPV+GC GIE
Sbjct: 1 MAAIYSLYIINKSGGLIFYKDCGTKGRMDTNDSLRVASLWHSMHAISQQLSPVNGCSGIE 60
Query: 61 LLQADTFDLHCFQSLTGTKFFVVSEPGAQYMESLLKFIYELYTDYVLKNPFYEMEMPIRC 120
LL+ADTFDLHCFQSL GTKFFVV EPG +MESLL++IYELYTDYVLKNPFYE+EMPIRC
Sbjct: 61 LLEADTFDLHCFQSLPGTKFFVVCEPGTPHMESLLRYIYELYTDYVLKNPFYEIEMPIRC 120
Query: 121 ELFDINLTQAVQKDRVALLGR 141
ELFDINLTQAVQ DRVALLGR
Sbjct: 121 ELFDINLTQAVQSDRVALLGR 141
>AT1G51160.2 | Symbols: | SNARE-like superfamily protein |
chr1:18950057-18951560 FORWARD LENGTH=169
Length = 169
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 7 LYIINKSGGLIYYKDYGSSGRM--DTNDTLRVASLWHSMHAISQQLSPVS---GCFGIEL 61
+Y+ N++G + YK++ D + L S+ +++ ++ PV+ G G+
Sbjct: 26 MYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGVPQ 85
Query: 62 LQADTFDLHCFQSLT----------GTKFFVVSEPGAQYMESLLKFIYELYTDYVLKNPF 111
L H F++ T G K +V+ P + LK+IY LY +YV+KNP
Sbjct: 86 LPGQGCSFHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVKNPI 145
Query: 112 YEMEMPIRCELFDINLTQAVQ 132
Y PI+ ELF+ L Q V+
Sbjct: 146 YSPGSPIKSELFNTALDQYVR 166
>AT1G51160.1 | Symbols: | SNARE-like superfamily protein |
chr1:18950057-18951560 FORWARD LENGTH=169
Length = 169
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 7 LYIINKSGGLIYYKDYGSSGRM--DTNDTLRVASLWHSMHAISQQLSPVS---GCFGIEL 61
+Y+ N++G + YK++ D + L S+ +++ ++ PV+ G G+
Sbjct: 26 MYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGVPQ 85
Query: 62 LQADTFDLHCFQSLT----------GTKFFVVSEPGAQYMESLLKFIYELYTDYVLKNPF 111
L H F++ T G K +V+ P + LK+IY LY +YV+KNP
Sbjct: 86 LPGQGCSFHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVKNPI 145
Query: 112 YEMEMPIRCELFDINLTQAVQ 132
Y PI+ ELF+ L Q V+
Sbjct: 146 YSPGSPIKSELFNTALDQYVR 166