Miyakogusa Predicted Gene
- Lj6g3v0291950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0291950.1 Non Chatacterized Hit- tr|I1LN35|I1LN35_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.15,0,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; SUBFAMI,CUFF.57687.1
(614 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 827 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 463 e-130
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 447 e-125
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 445 e-125
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 444 e-125
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 439 e-123
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 434 e-122
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 423 e-118
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 422 e-118
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-118
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 419 e-117
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 418 e-117
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 416 e-116
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 416 e-116
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 416 e-116
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 415 e-116
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 414 e-115
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 411 e-115
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 410 e-114
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 408 e-114
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 405 e-113
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 398 e-111
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 397 e-110
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 389 e-108
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 386 e-107
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 382 e-106
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 379 e-105
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 379 e-105
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 375 e-104
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 365 e-101
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 365 e-101
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-99
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 3e-97
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 347 2e-95
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 4e-95
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 9e-93
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 330 2e-90
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 328 5e-90
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 8e-90
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 4e-84
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 4e-84
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 308 5e-84
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 2e-81
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 296 2e-80
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 296 3e-80
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 290 1e-78
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 287 1e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 2e-74
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 2e-73
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 266 5e-71
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 263 3e-70
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 253 2e-67
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 3e-67
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 251 9e-67
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 249 4e-66
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 8e-66
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 6e-63
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 6e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 235 8e-62
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 233 2e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 6e-56
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 198 9e-51
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 8e-49
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 8e-49
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 1e-46
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 5e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 101 2e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 90 6e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 9e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 87 3e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 8e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 85 1e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 80 5e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 5e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 76 7e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 3e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 72 1e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 5e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 66 6e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 2e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 3e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 1e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 58 2e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 53 5e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 5e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 5e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 8e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 49 1e-05
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/606 (66%), Positives = 481/606 (79%), Gaps = 6/606 (0%)
Query: 13 QLSSVARQSPFLTKK-LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRD 71
QL AR T K LHA I+K G+ Q P NTL++ YGKCG ALQ+FD +PHRD
Sbjct: 9 QLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 72 LVSWASVLSACNLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLHVNQGKQ 130
++WASVL+A N ANL + LS+ S+ +PD FVFS L+KACAN+G ++ G+Q
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS--IDHGRQ 126
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGR 190
VH HF++S YAND+VVKS+LVDMYAK GL + +AVFDSI N+ISWTAM+SGYA+SGR
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 191 RSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVG 250
+ EAL LFR P KNL++WTALISG VQSG G++AF F +MR+E + I DPLVLSS+VG
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
ACANLA G+QVHGLVI LG++SCVFISNAL+DMYAKCSD++AAK IF M +DVVS
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
WTS+IVG AQHGQAE+ALALYDDMVS VKPNEVTFVGLIYACS+VG V KGR LF+SM
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 371 EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
+DYGI+PSLQHYTCLLDL RSG LDEAENLI TMP PDEPTWAALLSACK G QM
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 431 VRIADKLL-CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGK 489
+RIAD L+ K +DPS+YILLSN+YA AS+W VS+ R+ + EV+K+PG+S +++ K
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRK 486
Query: 490 ESHVFYAGETSHPMKDEILGLMRKLDAEMRKR-GYVPDTSYVLHDMDQQEKERQLFWHSE 548
E+ VFYAGETSHP+K++I L++KL+ EMR R GYVPDTS++LHDMD+QEKE+ LFWHSE
Sbjct: 487 ETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSE 546
Query: 549 RLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKC 608
R AVAYGLLKAVPGT IRIVKNLRVCGDCH VLK IS I REI VRDA RYHHFK GKC
Sbjct: 547 RSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKC 606
Query: 609 SCNDFW 614
SCNDFW
Sbjct: 607 SCNDFW 612
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 346/570 (60%), Gaps = 11/570 (1%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N LL + K + +A Q FD++ RD+VSW ++++ + + +R L +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSG----KIDEARQLFDESPV 278
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D F ++ ++ G + ++ F P N+ V + ++ Y + + +
Sbjct: 279 QDVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNE-VSWNAMLAGYVQGERMEMAK 332
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
+FD + N +W MI+GYA+ G+ SEA LF + P ++ +W A+I+G QSG+ +
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A FV+M +EG + + SS + CA++ ELGKQ+HG ++ GYE+ F+ NAL+
Sbjct: 393 ALRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
MY KC + A +F EM+ KD+VSW ++I G ++HG E AL ++ M +KP++
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
T V ++ ACS+ GLV KGR F +M +DYG+ P+ QHY C++DL R+G L++A NL++
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
MP PD W LL A + HGNT++A ADK+ ++PE+ Y+LLSN+YA + W +V
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 631
Query: 465 SKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYV 524
K+R M K VKK PGYS I++ ++H F G+ HP KDEI + +LD M+K GYV
Sbjct: 632 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Query: 525 PDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLI 584
TS VLHD++++EKER + +HSERLAVAYG+++ G IR++KNLRVC DCH +K +
Sbjct: 692 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 751
Query: 585 STIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ I R I +RD R+HHFKDG CSC D+W
Sbjct: 752 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 197/464 (42%), Gaps = 69/464 (14%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N + +Y + G +AL++F +P VS+ ++S L + ++R L + +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGY----LRNGEFELARKLFDEMPE 123
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK-STLVDMYAKFGLPDYG 163
D ++ +IK + N GK A L DV +T++ YA+ G D
Sbjct: 124 RDLVSWNVMIKGYVR----NRNLGK---ARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
R+VFD + N +SW A++S Y ++ + EA LF+ L +W L+ G V+ V
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 224 DAFYTFVKMRQEGIT--------------------------IADPLVLSSVV-GACANLA 256
+A F M + + D +++V G N
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 257 VWE-------------------LGKQVHGLVIGLGYE-----SCVFIS--NALVDMYAKC 290
V E L V G + + E C +S N ++ YA+C
Sbjct: 297 VEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQC 356
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
+ AK +F +M ++D VSW ++I G +Q G + EAL L+ M + N +F +
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 351 YACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD 410
C++V + G+ L +V+ G + LL ++ + G ++EA +L + M D
Sbjct: 417 STCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEM-AGKD 474
Query: 411 EPTWAALLSACKHHGNTQMAVRIAD--KLLCLKPEDPSSYILLS 452
+W +++ HG ++A+R + K LKP+D + +LS
Sbjct: 475 IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 130/335 (38%), Gaps = 84/335 (25%)
Query: 178 WTAMISGYARSGRRSEALRLFR-------------------------------ESPYKNL 206
W IS Y R+GR +EALR+F+ E P ++L
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA------------- 253
+W +I G V++ N A F M + + + ++ C
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 254 NLAVW--------ELGKQVHGLVIGLGYESCVFIS-NALVDMYAKCSDLVAAKYIFCEMS 304
N W + K ++ E+ +S N L+ + K +V A+ F M+
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
+DVVSW +II G AQ G+ +EA L+D+ V T+ ++ +V + R
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARE 302
Query: 365 LFRSMVED------------------------YGIKP--SLQHYTCLLDLFSRSGHLDEA 398
LF M E + + P ++ + ++ +++ G + EA
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEA 362
Query: 399 ENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+NL MP D +WAA+++ G++ A+R+
Sbjct: 363 KNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRL 396
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K+LH +++K G N LL Y KCG +++A LF + +D+VSW ++++ +
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYS 486
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
AL S+ +G +PD ++ AC++ G V++G+Q
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL--VDKGRQ 531
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/628 (37%), Positives = 352/628 (56%), Gaps = 47/628 (7%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCG----LLQDALQLFDTLPHRDLVSWASVLSAC 82
+ HA +KSG N L+ Y KC LL A ++FD + +D SW ++++
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229
Query: 83 ------------------NLA--------------NLPHRALSISRSLLHQGFQPDHFVF 110
N+ AL + R ++ G + D F +
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 111 STLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV---VKSTLVDMYAKFGLPDYGRAVF 167
++I+ACA G L + GKQVHA+ L +D ++LV +Y K G D RA+F
Sbjct: 290 PSVIRACATAGLLQL--GKQVHAYVL----RREDFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 168 DSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFY 227
+ + + + +SW A++SGY SG EA +F+E KN+ +W +ISGL ++G G +
Sbjct: 344 EKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLK 403
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
F M++EG D S + +CA L + G+Q H ++ +G++S + NAL+ MY
Sbjct: 404 LFSCMKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 288 AKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFV 347
AKC + A+ +F M D VSW ++I QHG EA+ +Y++M+ ++P+ +T +
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV 407
++ ACS+ GLV +GR F SM Y I P HY L+DL RSG +AE++I ++P
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPF 582
Query: 408 SPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKV 467
P W ALLS C+ HGN ++ + ADKL L PE +Y+LLSN++A WE V++V
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARV 642
Query: 468 RKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDT 527
RKLM + VKKE S I++ + H F +TSHP + + ++ L EMR+ GYVPDT
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDT 702
Query: 528 SYVLHDMDQQ-EKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLIST 586
S+VLHD++ KE L HSE++AVA+GL+K PGT IRI KNLR CGDCH + +S
Sbjct: 703 SFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSW 762
Query: 587 IESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ R+I +RD KR+HHF++G+CSC +FW
Sbjct: 763 VVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 213/490 (43%), Gaps = 76/490 (15%)
Query: 19 RQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH--------- 69
R S L + +H II G N L+D Y K L A QLFD +
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 70 ------------------------RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQP 105
RD V + ++++ + N + A+++ + H+GF+P
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 106 DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG----LPD 161
D+F F++++ A + Q Q HA L S V + LV +Y+K L
Sbjct: 147 DNFTFASVLAGLALVAD-DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 162 YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE-SPYKNLFAWTALISGLVQSG 220
R VFD I + SWT M++GY ++G L L A+ A+ISG V G
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 221 NGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVF-I 279
+A +M GI + D SV+ ACA + +LGKQVH V L E F
Sbjct: 266 FYQEALEMVRRMVSSGIEL-DEFTYPSVIRACATAGLLQLGKQVHAYV--LRREDFSFHF 322
Query: 280 SNALVDMYAKCS---------------DLVA----------------AKYIFCEMSRKDV 308
N+LV +Y KC DLV+ AK IF EM K++
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
+SW +I G A++G EE L L+ M +P + F G I +C+ +G G+ + +
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-YHA 441
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
+ G SL L+ ++++ G ++EA + RTMP D +W AL++A HG+
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGA 500
Query: 429 MAVRIADKLL 438
AV + +++L
Sbjct: 501 EAVDVYEEML 510
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 47/352 (13%)
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS 169
++ ++ C + + + VH + + + + + L+D+Y K +Y R +FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 170 ISSLNSISWTAMISGYARSGRRSEALRLFRESP--YKNLFAWTALISGLVQSGNGVDAFY 227
IS + I+ T M+SGY SG + A +F ++P ++ + A+I+G + +G A
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELG-KQVHGLVIGLGYESCVFISNALVDM 286
F KM+ EG D +SV+ A +A E Q H + G +SNALV +
Sbjct: 135 LFCKMKHEGFK-PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSV 193
Query: 287 YAKCSD----LVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ------------------- 323
Y+KC+ L +A+ +F E+ KD SWT+++ G ++G
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 324 -------------AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
+EAL + MVS+ ++ +E T+ +I AC+ GL+ G+ + ++
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 371 --EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
ED+ S L+ L+ + G DEA + MP + D +W ALLS
Sbjct: 314 RREDF----SFHFDNSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSG 360
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/646 (37%), Positives = 374/646 (57%), Gaps = 45/646 (6%)
Query: 8 YALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCG----------- 55
+ L + L+SVA T KK+H+ I+K GL + N+LL+ Y KCG
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 56 -LLQD-------------------ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSIS 95
+++D A+ F+ + RD+V+W S++S N RAL I
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 96 RSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMY 154
+L PD F ++++ ACAN+ L + GKQ+H+H + + + +V + L+ MY
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCI--GKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 155 AKFGLPDYGRAVFD--SISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTAL 212
++ G + R + + L +TA++ GY + G ++A +F +++ AWTA+
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
I G Q G+ +A F M G + L++++ ++LA GKQ+HG + G
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIF----CEMSRKDVVSWTSIIVGTAQHGQAEEAL 328
V +SNAL+ MYAK ++ +A F CE +D VSWTS+I+ AQHG AEEAL
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCE---RDTVSWTSMIIALAQHGHAEEAL 500
Query: 329 ALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDL 388
L++ M+ ++P+ +T+VG+ AC++ GLV++GR F M + I P+L HY C++DL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 389 FSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSY 448
F R+G L EA+ I MP+ PD TW +LLSAC+ H N + A++LL L+PE+ +Y
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 449 ILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEIL 508
L+N+Y+ WE +K+RK M VKKE G+S I++ + HVF + +HP K+EI
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Query: 509 GLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIV 568
M+K+ E++K GYVPDT+ VLHD++++ KE+ L HSE+LA+A+GL+ T +RI+
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIM 740
Query: 569 KNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
KNLRVC DCHT +K IS + REI VRD R+HHFKDG CSC D+W
Sbjct: 741 KNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 237/488 (48%), Gaps = 44/488 (9%)
Query: 28 LHAQIIKSGLSQHEPFP-NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
LHA+ + + F NT+L AY K G + + FD LP RD VSW +++
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
H+A+ + ++ +G +P F + ++ + A + GK+VH+ + + V
Sbjct: 126 QYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET--GKKVHSFIVKLGLRGNVSV 183
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++L++MYAK G P + VFD + + SW AMI+ + + G+ A+ F + +++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
W ++ISG Q G + A F KM ++ + D L+SV+ ACANL +GKQ+H
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 267 LVIGLGYESCVFISNALVDMYAKC---------------------------------SDL 293
++ G++ + NAL+ MY++C D+
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 294 VAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYAC 353
AK IF + +DVV+WT++IVG QHG EA+ L+ MV +PN T ++
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
S++ +S G+ + S V+ G S+ L+ +++++G++ A + D +
Sbjct: 424 SSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 414 WAALLSACKHHGNTQMAVRIADKLLC--LKPEDPSSYILLSNVYAGASMWENVSKVRKLM 471
W +++ A HG+ + A+ + + +L L+P+ +I V++ + V++ R+
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPD----HITYVGVFSACTHAGLVNQGRQYF 538
Query: 472 -MVKEVKK 478
M+K+V K
Sbjct: 539 DMMKDVDK 546
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 180/416 (43%), Gaps = 73/416 (17%)
Query: 105 PDHFVFSTLIKACANMGPLHVNQ------GKQVHAHFLLSPYANDDVVKSTLVDMYAKFG 158
P STL++ C N+ VN+ + VH + S + + L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 159 LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQ 218
+ R +FD + + SW ++S Y++ G F + P ++ +WT +I G
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 219 SGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVF 278
G A M +EGI L++V+ + A E GK+VH ++ LG V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 279 ISNALVDMYAKCSDLVAAKYIFC-------------------------------EMSRKD 307
+SN+L++MYAKC D + AK++F +M+ +D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
+V+W S+I G Q G AL ++ M+ + + P+ T ++ AC+N+ + G+ +
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 367 -------------------------------RSMVEDYGIKP-SLQHYTCLLDLFSRSGH 394
R ++E G K ++ +T LLD + + G
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 395 LDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYIL 450
+++A+N+ ++ D W A++ + HG+ A+ + ++ + P+SY L
Sbjct: 363 MNQAKNIFVSLK-DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTL 416
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 347/592 (58%), Gaps = 3/592 (0%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + LH +KS + N+L+ Y CG L A ++F T+ +D+VSW S+++
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
P +AL + + + + + H ++ ACA + L G+QV ++ + +
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF--GRQVCSYIEENRVNVN 266
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ + ++DMY K G + + +FD++ ++++WT M+ GYA S A + P
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
K++ AW ALIS Q+G +A F +++ + + + L S + ACA + ELG+
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H + G +++AL+ MY+KC DL ++ +F + ++DV W+++I G A HG
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
EA+ ++ M A VKPN VTF + ACS+ GLV + +LF M +YGI P +HY
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 506
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++D+ RSG+L++A I MP+ P W ALL ACK H N +A +LL L+P
Sbjct: 507 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPR 566
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
+ +++LLSN+YA WENVS++RK M V +KKEPG S I++ H F +G+ +HPM
Sbjct: 567 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 626
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQE-KERQLFWHSERLAVAYGLLKAVPG 562
+++ G + ++ +++ GY P+ S VL ++++E KE+ L HSE+LA+ YGL+
Sbjct: 627 SEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAP 686
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+IR++KNLRVCGDCH+V KLIS + REI VRD R+HHF++G+CSCNDFW
Sbjct: 687 KVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 140/309 (45%), Gaps = 40/309 (12%)
Query: 112 TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYA--KFGLPDYGRAVFDS 169
+LI+ C ++ Q KQ H H + + +D S L M A F +Y R VFD
Sbjct: 35 SLIERCVSL-----RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89
Query: 170 ISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
I P N FAW LI + V + + F
Sbjct: 90 I-------------------------------PKPNSFAWNTLIRAYASGPDPVLSIWAF 118
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
+ M E + ++ A A ++ LG+ +HG+ + S VF++N+L+ Y
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS 178
Query: 290 CSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
C DL +A +F + KDVVSW S+I G Q G ++AL L+ M S VK + VT VG+
Sbjct: 179 CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
+ AC+ + + GR + S +E+ + +L +LD++++ G +++A+ L M
Sbjct: 239 LSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EK 296
Query: 410 DEPTWAALL 418
D TW +L
Sbjct: 297 DNVTWTTML 305
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 328/570 (57%), Gaps = 35/570 (6%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N+L+ CG+++DALQLF + +D VSWA+++ L A+ R + QG +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK 267
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D + F +++ AC +G +N+GKQ+HA + + + + V S L+DMY K Y +
Sbjct: 268 MDQYPFGSVLPACGGLGA--INEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
VFD + KN+ +WTA++ G Q+G +
Sbjct: 326 TVFDRMKQ-------------------------------KNVVSWTAMVVGYGQTGRAEE 354
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A F+ M++ GI D L + ACAN++ E G Q HG I G V +SN+LV
Sbjct: 355 AVKIFLDMQRSGID-PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
+Y KC D+ + +F EM+ +D VSWT+++ AQ G+A E + L+D MV +KP+ V
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
T G+I ACS GLV KG+ F+ M +YGI PS+ HY+C++DLFSRSG L+EA I
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
MP PD W LLSAC++ GN ++ A+ L+ L P P+ Y LLS++YA W++V
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 465 SKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYV 524
+++R+ M K VKKEPG S I + H F A + S P D+I + +L+ ++ GY
Sbjct: 594 AQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653
Query: 525 PDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLI 584
PDTS+V HD+++ K + L +HSERLA+A+GL+ G IR+ KNLRVC DCH K I
Sbjct: 654 PDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHI 713
Query: 585 STIESREIYVRDAKRYHHFKDGKCSCNDFW 614
S++ REI VRDA R+H FKDG CSC DFW
Sbjct: 714 SSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 232/457 (50%), Gaps = 29/457 (6%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N LL AY K GL+ + F+ LP RD V+W ++ +L+ L A+ +++ F
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FS 134
Query: 105 PD--HFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
+ T++K ++ G HV+ GKQ+H + + + +V S L+ MYA G
Sbjct: 135 ANLTRVTLMTMLKLSSSNG--HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 163 GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNG 222
+ VF + N++ + +++ G G +AL+LFR K+ +W A+I GL Q+G
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLA 251
Query: 223 VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNA 282
+A F +M+ +G+ + D SV+ AC L GKQ+H +I ++ +++ +A
Sbjct: 252 KEAIECFREMKVQGLKM-DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 283 LVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPN 342
L+DMY KC L AK +F M +K+VVSWT+++VG Q G+AEEA+ ++ DM + + P+
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC----LLDLFSRSGHLDEA 398
T I AC+NV + +G S I L HY L+ L+ + G +D++
Sbjct: 371 HYTLGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 399 ENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLSNVYA 456
L M V D +W A++SA G +++ DK++ LKP+ + L+ V +
Sbjct: 426 TRLFNEMNVR-DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG----VTLTGVIS 480
Query: 457 GASMWENVSKVRKL--MMVKEVKKEPG---YSC-IDL 487
S V K ++ +M E P YSC IDL
Sbjct: 481 ACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 176/391 (45%), Gaps = 52/391 (13%)
Query: 110 FSTLIKACANMGPLHVNQG-KQVHAHFLLS-PYANDDVVKSTLVDMYAKFGLPDYGRAVF 167
+S IK C +G + ++ K +H + + + PY + + + +V YA Y R VF
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYP-ETFLYNNIVHAYALMKSSTYARRVF 64
Query: 168 DSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS---GNGVD 224
D I N SW ++ Y+++G SE F + P ++ W LI G S G V
Sbjct: 65 DRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVK 124
Query: 225 AFYTFVK---MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISN 281
A+ T ++ +T+ L LSS G + LGKQ+HG VI LG+ES + + +
Sbjct: 125 AYNTMMRDFSANLTRVTLMTMLKLSSSNGHVS------LGKQIHGQVIKLGFESYLLVGS 178
Query: 282 ALVDMYAKCSDLVAAKYIF--------------------CEM----------SRKDVVSW 311
L+ MYA + AK +F C M KD VSW
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSW 238
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
++I G AQ+G A+EA+ + +M +K ++ F ++ AC +G +++G+ + ++
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
+ + + L+D++ + L A+ + M + +W A++ G + AV
Sbjct: 299 T-NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 432 RIADKLLCLKPE--DPSSYILLSNVYAGASM 460
+I L ++ DP Y L + A A++
Sbjct: 357 KI---FLDMQRSGIDPDHYTLGQAISACANV 384
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 361/648 (55%), Gaps = 43/648 (6%)
Query: 7 AYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
++ L + A S F + K++H SGL ++ Y +CG + DA ++FD
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 66 TLPHRD-----------------------------------LVSWASVLSACNLANLPHR 90
+ +D +VSW +LS N +
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 91 ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
A+ + + + H GF PD S+++ + + L N G+ +H + + D V S +
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML--NMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR---LFRESPYK-NL 206
+DMY K G ++F+ + + A I+G +R+G +AL LF+E + N+
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
+WT++I+G Q+G ++A F +M+ G+ + + + S++ AC N+A G+ HG
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQVAGVK-PNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
+ + V + +AL+DMYAKC + ++ +F M K++V W S++ G + HG+A+E
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
+++++ ++ R+KP+ ++F L+ AC VGL +G F+ M E+YGIKP L+HY+C++
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV 532
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
+L R+G L EA +LI+ MP PD W ALL++C+ N +A A+KL L+PE+P
Sbjct: 533 NLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG 592
Query: 447 SYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDE 506
+Y+LLSN+YA MW V +R M +KK PG S I + + AG+ SHP D+
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQ 652
Query: 507 ILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIR 566
I M ++ EMRK G+ P+ + LHD+++QE+E+ L+ HSE+LAV +GLL GT ++
Sbjct: 653 ITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQ 712
Query: 567 IVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
++KNLR+CGDCH V+K IS+ REI++RD R+HHFKDG CSC DFW
Sbjct: 713 VIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 50/471 (10%)
Query: 25 TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
T + HA+I+KSG L+ +Y DA + ++P + S++S++ A
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
A L +++ + + G PD V L K CA + V GKQ+H +S D
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKV--GKQIHCVSCVSGLDMDA 151
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V+ ++ MY + G R VFD +S + ++ +A++ YAR G E +R+ E
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 205 ----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
N+ +W ++SG +SG +A F K+ G D + +SSV+ + + + +
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC-PDQVTVSSVLPSVGDSEMLNM 270
Query: 261 GKQVHGLVI--GLGYESCVFISNALVDMYAKCSDLVAAKYIFCE---------------M 303
G+ +HG VI GL + CV +A++DMY K + +F + +
Sbjct: 271 GRLIHGYVIKQGLLKDKCVI--SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 304 SRK--------------------DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
SR +VVSWTSII G AQ+G+ EAL L+ +M A VKPN
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
VT ++ AC N+ + GR+ V + + ++ + L+D++++ G ++ ++ +
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLS 452
MP + + W +L++ HG + + I + L+ LKP+ S LLS
Sbjct: 448 MMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/581 (38%), Positives = 340/581 (58%), Gaps = 10/581 (1%)
Query: 41 EPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLL 99
+PF T +D Y CG + A +FD + HRD+V+W +++ L A + +
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
PD + ++ AC G + N+ ++ + + D + + LV MYA G
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRA--IYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 160 PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS 219
D R F +S N TAM+SGY++ GR +A +F ++ K+L WT +IS V+S
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 220 GNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFI 279
+A F +M GI D + + SV+ ACANL + + K VH + G ES + I
Sbjct: 323 DYPQEALRVFEEMCCSGIK-PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 280 SNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARV 339
+NAL++MYAKC L A + +F +M R++VVSW+S+I + HG+A +AL+L+ M V
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 340 KPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAE 399
+PNEVTFVG++Y CS+ GLV +G+ +F SM ++Y I P L+HY C++DLF R+ L EA
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 400 NLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGAS 459
+I +MPV+ + W +L+SAC+ HG ++ A ++L L+P+ + +L+SN+YA
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQ 561
Query: 460 MWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMR 519
WE+V +R++M K V KE G S ID +SH F G+ H +EI + ++ ++++
Sbjct: 562 RWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Query: 520 KRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT------IIRIVKNLRV 573
GYVPD VL D++++EK+ + WHSE+LA+ +GL+ +IRIVKNLRV
Sbjct: 622 LAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRV 681
Query: 574 CGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
C DCH KL+S + REI VRD R+H +K+G CSC D+W
Sbjct: 682 CEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 190/385 (49%), Gaps = 18/385 (4%)
Query: 60 ALQLFDTLPHR-DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA 118
AL +F ++P + + + L + ++ P + + + H G + D F F ++KA +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
+ L +G ++H D V++ +DMYA G +Y R VFD +S + ++W
Sbjct: 123 KVSALF--EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLV----QSGNGV--DAFYTFVKM 232
MI Y R G EA +LF E N+ ++ +V ++GN A Y F+
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL-- 238
Query: 233 RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSD 292
E D +L+++V A ++ ++ + +F+S A+V Y+KC
Sbjct: 239 -IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN----LFVSTAMVSGYSKCGR 293
Query: 293 LVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA 352
L A+ IF + +KD+V WT++I + +EAL ++++M + +KP+ V+ +I A
Sbjct: 294 LDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA 353
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEP 412
C+N+G++ K + + S + G++ L L++++++ G LD ++ MP +
Sbjct: 354 CANLGILDKAKWV-HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVV 411
Query: 413 TWAALLSACKHHGNTQMAVRIADKL 437
+W+++++A HG A+ + ++
Sbjct: 412 SWSSMINALSMHGEASDALSLFARM 436
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 33/244 (13%)
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
D ++ A + ++ G ++HG+ + F+ +DMYA C + A+ +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
EMS +DVV+W ++I + G +EA L+++M + V P+E+ ++ AC G +
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV------------- 407
RA++ ++E+ ++ T L+ +++ +G +D A R M V
Sbjct: 230 YNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 408 -----------------SPDEPTWAALLSACKHHGNTQMAVRIADKLLC--LKPEDPSSY 448
D W ++SA Q A+R+ +++ C +KP+ S +
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 449 ILLS 452
++S
Sbjct: 349 SVIS 352
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K +H+ I +GL N L++ Y KCG L +F+ +P R++VSW+S+++A ++
Sbjct: 364 KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA----HFLLSPYA 141
ALS+ + + +P+ F ++ C++ G V +GK++ A + ++P
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL--VEEGKKIFASMTDEYNITPKL 481
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMISG 184
+VD++ + L V +S+ + N + W +++S
Sbjct: 482 EH---YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/619 (37%), Positives = 351/619 (56%), Gaps = 62/619 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
KK+H I SG N LL Y KCG L DA ++FD +P+RDL SW +++
Sbjct: 105 KKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEV 164
Query: 86 NLPHRAL----------SISRSLLHQGF----QPDH-FVFSTLIKACANMGP-------- 122
L A S S + + G+ QP+ V +L++ N P
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 123 -------LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNS 175
+ +GK++H H + + +D+V+ S+L+DMY K G D R +FD I +
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 176 ISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQE 235
+SWT+MI Y +S R E LF E + G + N YTF
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSE------------LVGSCERPNE----YTF------ 322
Query: 236 GITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
+ V+ ACA+L ELGKQVHG + +G++ F S++LVDMY KC ++ +
Sbjct: 323 ----------AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 296 AKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSN 355
AK++ + D+VSWTS+I G AQ+GQ +EAL +D ++ + KP+ VTFV ++ AC++
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 356 VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWA 415
GLV KG F S+ E + + + HYTCL+DL +RSG ++ +++I MP+ P + WA
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 416 ALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
++L C +GN +A A +L ++PE+P +Y+ ++N+YA A WE K+RK M
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 476 VKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMD 535
V K PG S ++ ++ HVF A +TSHPM ++I+ +R+L +M++ GYVP TS VLHD++
Sbjct: 553 VTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVE 612
Query: 536 QQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVR 595
++KE L +HSE+LAVA+ +L GT I++ KNLR C DCH +K IS I R+I VR
Sbjct: 613 DEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVR 672
Query: 596 DAKRYHHFKDGKCSCNDFW 614
D+ R+H F++G+CSC D+W
Sbjct: 673 DSTRFHCFENGQCSCGDYW 691
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 189/362 (52%), Gaps = 6/362 (1%)
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF 157
LL + +P + LI+ C+ L +GK+VH H S + V+ + L+ MYAK
Sbjct: 76 LLGRAKKPPASTYCNLIQVCSQTRALE--EGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 158 GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLV 217
G R VFD + + + SW M++GYA G EA +LF E K+ ++WTA+++G V
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 218 QSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCV 277
+ +A + M++ + + +S V A A + GK++HG ++ G +S
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 278 FISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSA 337
+ ++L+DMY KC + A+ IF ++ KDVVSWTS+I + + E +L+ ++V +
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 338 RVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDE 397
+PNE TF G++ AC+++ G+ + M G P + L+D++++ G+++
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIES 372
Query: 398 AENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAG 457
A++++ P PD +W +L+ C +G A++ D L LK ++ NV +
Sbjct: 373 AKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFD--LLLKSGTKPDHVTFVNVLSA 429
Query: 458 AS 459
+
Sbjct: 430 CT 431
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 43/204 (21%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K++H + + G + ++L+D Y KCG ++ A + D P DLVSW S++ C
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCA 396
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
P AL LL G +PDH F ++ AC HA
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC-------------THA---------- 433
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSIS-----WTAMISGYARSGRRSEALRLF 198
GL + G F SI+ + +S +T ++ ARSGR + +
Sbjct: 434 --------------GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 199 RESPYK-NLFAWTALISGLVQSGN 221
E P K + F W +++ G GN
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGN 503
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 339/592 (57%), Gaps = 10/592 (1%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLD---AYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
++HA I++ L H +P L AY G ++ +L LF DL + + ++ +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ L +A + LL P+ F FS+L+K+C+ GK +H H L D
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS------TKSGKLIHTHVLKFGLGID 160
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + LVD+YAK G + VFD + + +S TAMI+ YA+ G A LF
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+++ +W +I G Q G DA F K+ EG D + + + + AC+ + E G+
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H V V + L+DMY+KC L A +F + RKD+V+W ++I G A HG
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 324 AEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+++AL L+++M ++P ++TF+G + AC++ GLV++G +F SM ++YGIKP ++HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
CL+ L R+G L A I+ M + D W+++L +CK HG+ + IA+ L+ L
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
++ Y+LLSN+YA +E V+KVR LM K + KEPG S I++ + H F AG+ H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 503 MKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 562
EI ++RK+ ++ GYVP+T+ VL D+++ EKE+ L HSERLA+AYGL+ PG
Sbjct: 521 KSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPG 580
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ ++I KNLRVC DCHTV KLIS I R+I +RD R+HHF DG CSC DFW
Sbjct: 581 SPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 152/386 (39%), Gaps = 85/386 (22%)
Query: 3 LSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQ 62
++ + + S L S + +S K +H ++K GL L+D Y K G + A +
Sbjct: 126 INPNEFTFSSLLKSCSTKS---GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQK 182
Query: 63 LFDTLPH-------------------------------RDLVSWASVLSACNLANLPHRA 91
+FD +P RD+VSW ++ P+ A
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 92 LSISRSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
L + + LL +G +PD + AC+ +G L G+ +H S + V + L
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALET--GRWIHVFVKSSRIRLNVKVCTGL 300
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE-------SPY 203
+DMY+K G + VF+ + ++W AMI+GYA G +ALRLF E P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 204 KNLFAWT----------------------------------ALISGLVQSGNGVDAFYTF 229
F T L+S L ++G A+ T
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYE-SCVFISNALVDMYA 288
M + AD ++ SSV+G+C + LGK++ +IGL + S +++ L ++YA
Sbjct: 421 KNMNMD----ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYV--LLSNIYA 474
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSI 314
D + M K +V I
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIVKEPGI 500
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 347/591 (58%), Gaps = 35/591 (5%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L+K++H IK L+DAY + +++A LF+ + DLV+W ++++
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYT 493
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
++ H+ L + + QG + D F +T+ K C + +NQGKQVHA+ + S Y D
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL--FAINQGKQVHAYAIKSGYDLD 551
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V S ++DMY K G + FDSI P
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSI-------------------------------PV 580
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ AWT +ISG +++G AF+ F +MR G+ + D ++++ A + L E G+Q
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV-LPDEFTIATLAKASSCLTALEQGRQ 639
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H + L + F+ +LVDMYAKC + A +F + ++ +W +++VG AQHG+
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+E L L+ M S +KP++VTF+G++ ACS+ GLVS+ RSM DYGIKP ++HY+
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
CL D R+G + +AENLI +M + + LL+AC+ G+T+ R+A KLL L+P
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
D S+Y+LLSN+YA AS W+ + R +M +VKK+PG+S I++ + H+F + S+
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 563
+ I ++ + ++++ GYVP+T + L D++++EKER L++HSE+LAVA+GLL P T
Sbjct: 880 TELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPST 939
Query: 564 IIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IR++KNLRVCGDCH +K I+ + +REI +RDA R+H FKDG CSC D+W
Sbjct: 940 PIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 239/515 (46%), Gaps = 44/515 (8%)
Query: 15 SSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVS 74
++V S L +++H +K GL N+L++ Y K A +FD + RDL+S
Sbjct: 324 TAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 75 WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH 134
W SV++ L A+ + LL G +PD + ++++KA +++ P ++ KQVH H
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL-PEGLSLSKQVHVH 442
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
+ +D V + L+D Y++ +F+ + + ++W AM++GY +S +
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKT 501
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
L+L F M ++G +D L++V C
Sbjct: 502 LKL-------------------------------FALMHKQG-ERSDDFTLATVFKTCGF 529
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
L GKQVH I GY+ +++S+ ++DMY KC D+ AA++ F + D V+WT++
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DY 373
I G ++G+ E A ++ M V P+E T L A S + + +GR + + ++ +
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 374 GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
P + T L+D++++ G +D+A L + + + + W A+L HG + +++
Sbjct: 650 TNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQL 706
Query: 434 ADKL--LCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE-PGYSCI--DLG 488
++ L +KP+ + +LS + E +R + +K E YSC+ LG
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 489 KESHVFYAGETSHPMKDEILGLM-RKLDAEMRKRG 522
+ V A M E M R L A R +G
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 203/451 (45%), Gaps = 52/451 (11%)
Query: 15 SSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVS 74
+++ L K HA+I+ + N L+ Y KCG L A ++FD +P RDLVS
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS 107
Query: 75 WASVLSA------CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
W S+L+A C + N+ +A + R L S ++K C + G +V
Sbjct: 108 WNSILAAYAQSSECVVENI-QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG--YVWAS 164
Query: 129 KQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS 188
+ H + D+ V LV++Y KFG G+ +F+ + + + W M+ Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 189 GRRSEALRL---FRES---PYKNLFAWTALIS------GLVQS-GNGVDA-FYTFVKMRQ 234
G + EA+ L F S P + A IS G V+S NG DA + + R
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRN 284
Query: 235 EGIT-----------------------IADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
+G++ D + ++ + LG+QVH + + L
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALY 331
G + + +SN+L++MY K A+ +F MS +D++SW S+I G AQ+G EA+ L+
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 332 DDMVSARVKPNEVTFVGLIYACSNV--GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
++ +KP++ T ++ A S++ GL S + + ++ + S T L+D +
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGL-SLSKQVHVHAIKINNVSDSFVS-TALIDAY 462
Query: 390 SRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
SR+ + EAE L D W A+++
Sbjct: 463 SRNRCMKEAEILFERHNF--DLVAWNAMMAG 491
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 7/180 (3%)
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
LGK H ++ F+ N L+ MY+KC L A+ +F +M +D+VSW SI+ A
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 320 QHGQA-----EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
Q + ++A L+ + V + +T ++ C + G V + F G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIG 175
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
+ L++++ + G + E + L MP D W +L A G + A+ ++
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLS 234
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 338/592 (57%), Gaps = 36/592 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +++H+QIIK+ + + L+D Y K G L A + +D+VSW ++++
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
N +AL+ R +L +G + D + + ACA + L +G+Q+HA +S +++D
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL--KEGQQIHAQACVSGFSSD 625
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
++ LV +Y+ R G+ E+ F ++
Sbjct: 626 LPFQNALVTLYS-------------------------------RCGKIEESYLAFEQTEA 654
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ AW AL+SG QSGN +A FV+M +EGI + S V A + A + GKQ
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID-NNNFTFGSAVKAASETANMKQGKQ 713
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VH ++ GY+S + NAL+ MYAKC + A+ F E+S K+ VSW +II ++HG
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
EAL +D M+ + V+PN VT VG++ ACS++GLV KG A F SM +YG+ P +HY
Sbjct: 774 GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++D+ +R+G L A+ I+ MP+ PD W LLSAC H N ++ A LL L+PE
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
D ++Y+LLSN+YA + W+ R+ M K VKKEPG S I++ H FY G+ +HP+
Sbjct: 894 DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 563
DEI + L + GYV D +L+++ ++K+ +F HSE+LA+++GLL ++P T
Sbjct: 954 ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLL-SLPAT 1012
Query: 564 I-IRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ I ++KNLRVC DCH +K +S + +REI VRDA R+HHF+ G CSC D+W
Sbjct: 1013 VPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 211/447 (47%), Gaps = 68/447 (15%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+KLH+QI+K GL + L D Y G L A ++FD +P R + +W ++
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
NL + ++ + P+ FS +++AC G + + +Q+HA L + V
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTV 223
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V + L+D+Y++ G D R VFD + + SW AMISG +++ +EA+RL
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL-------- 275
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
F M GI + P SSV+ AC + E+G+Q+H
Sbjct: 276 -----------------------FCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
GLV+ LG+ S ++ NALV +Y +L++A++IF MS++D V++ ++I G +Q G E
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
+A+ L+ M ++P+ T L+ ACS G + +G+ L + G + + L
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGAL 430
Query: 386 LDLFSRSGHLD---------EAENLI----------------------RTMPVS---PDE 411
L+L+++ ++ E EN++ R M + P++
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 412 PTWAALLSACKHHGNTQMAVRIADKLL 438
T+ ++L C G+ ++ +I +++
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQII 517
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 194/427 (45%), Gaps = 37/427 (8%)
Query: 8 YALKSQLSSVAR-QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
YA S LS+ + +S + ++LH ++K G S N L+ Y G L A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
+ RD V++ ++++ + +A+ + + + G +PD ++L+ AC+ G L
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLF-- 406
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
+G+Q+HA+ +A+++ ++ L+++YAK + F N + W M+ Y
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
+ R+FR+ M+ E I + +
Sbjct: 467 LLDDLRNSFRIFRQ-------------------------------MQIEEI-VPNQYTYP 494
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
S++ C L ELG+Q+H +I ++ ++ + L+DMYAK L A I + K
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
DVVSWT++I G Q+ ++AL + M+ ++ +EV + AC+ + + +G+ +
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
G L L+ L+SR G ++E+ L + D W AL+S + GN
Sbjct: 615 AQACVS-GFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 427 TQMAVRI 433
+ A+R+
Sbjct: 673 NEEALRV 679
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 188/417 (45%), Gaps = 40/417 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ +++HA+I+ GL N L+D Y + G + A ++FD L +D SW +++S +
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
A+ + + G P + FS+++ AC + L + G+Q+H L +++D
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI--GEQLHGLVLKLGFSSD 322
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + LV +Y G +F ++S +++++ +I+G ++ G +A+ LF+
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK---- 378
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+M +G+ D L+S+V AC+ G+Q
Sbjct: 379 ---------------------------RMHLDGLE-PDSNTLASLVVACSADGTLFRGQQ 410
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H LG+ S I AL+++YAKC+D+ A F E ++VV W ++V
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+ ++ M + PN+ T+ ++ C +G + G + +++ L Y
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK---TNFQLNAYV 527
Query: 384 C--LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
C L+D++++ G LD A +++ D +W +++ + A+ ++L
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 37/361 (10%)
Query: 97 SLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK 156
S+ ++G +P+H L++ C +++G+++H+ L ++ + L D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNG-SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL- 131
Query: 157 FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGL 216
F YG A ++F E P + +F W +I L
Sbjct: 132 FKGDLYG------------------------------AFKVFDEMPERTIFTWNKMIKEL 161
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV-WELGKQVHGLVIGLGYES 275
+ F FV+M E +T + S V+ AC +V +++ +Q+H ++ G
Sbjct: 162 ASRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 276 CVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV 335
+ N L+D+Y++ + A+ +F + KD SW ++I G +++ EA+ L+ DM
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 336 SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHL 395
+ P F ++ AC + + G L +V G L+ L+ G+L
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQL-HGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 396 DEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVY 455
AE++ M D T+ L++ G + A+ + K + L +P S L S V
Sbjct: 340 ISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELF-KRMHLDGLEPDSNTLASLVV 397
Query: 456 A 456
A
Sbjct: 398 A 398
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/615 (36%), Positives = 352/615 (57%), Gaps = 42/615 (6%)
Query: 3 LSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQ 62
LS ++A +L + ++ F T++LH ++K G + L+ AY KC + DAL+
Sbjct: 293 LSESSFASVIKLCANLKELRF-TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 63 LFDTLP-HRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
LF + ++VSW +++S + A+ + + +G +P+ F +S ++ A +
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 122 PLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAM 181
P +VHA + + Y V + L+D Y K
Sbjct: 412 P------SEVHAQVVKTNYERSSTVGTALLDAYVKL------------------------ 441
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
G+ EA ++F K++ AW+A+++G Q+G A F ++ + GI +
Sbjct: 442 -------GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK-PN 493
Query: 242 PLVLSSVVGACANL-AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
SS++ CA A GKQ HG I +S + +S+AL+ MYAK ++ +A+ +F
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
KD+VSW S+I G AQHGQA +AL ++ +M +VK + VTF+G+ AC++ GLV
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVE 613
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
+G F MV D I P+ +H +C++DL+SR+G L++A +I MP W +L+A
Sbjct: 614 EGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Query: 421 CKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEP 480
C+ H T++ A+K++ +KPED ++Y+LLSN+YA + W+ +KVRKLM + VKKEP
Sbjct: 674 CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEP 733
Query: 481 GYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKE 540
GYS I++ +++ F AG+ SHP+KD+I + L ++ GY PDTSYVL D+D + KE
Sbjct: 734 GYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKE 793
Query: 541 RQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRY 600
L HSERLA+A+GL+ G+ + I+KNLRVCGDCH V+KLI+ IE REI VRD+ R+
Sbjct: 794 AVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRF 853
Query: 601 HHF-KDGKCSCNDFW 614
HHF DG CSC DFW
Sbjct: 854 HHFSSDGVCSCGDFW 868
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 43/422 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++LH Q IK G +L+D Y K +D ++FD + R++V+W +++S
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
++ L++ + ++G QP+ F F+ + A G +G QVH + +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV--GGRGLQVHTVVVKNGLDKTIP 230
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V ++L+++Y K G R +FD + ++W +MISGYA +G EAL +
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM-------- 282
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
F MR + +++ +SV+ CANL +Q+H
Sbjct: 283 -----------------------FYSMRLNYVRLSES-SFASVIKLCANLKELRFTEQLH 318
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS-RKDVVSWTSIIVGTAQHGQA 324
V+ G+ I AL+ Y+KC+ ++ A +F E+ +VVSWT++I G Q+
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
EEA+ L+ +M V+PNE T+ ++ A + ++S + + +Y ++ T
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSSTVG--TA 433
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKP 442
LLD + + G ++EA + + D W+A+L+ G T+ A+++ +L +KP
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 443 ED 444
+
Sbjct: 493 NE 494
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 182/398 (45%), Gaps = 37/398 (9%)
Query: 57 LQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKA 116
L +A LFD P RD S+ S+L + A + ++ G + D +FS+++K
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 117 CANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI 176
A + G+Q+H + + +D V ++LVD Y K GR VFD
Sbjct: 103 SATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD-------- 152
Query: 177 SWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
E +N+ WT LISG ++ + F++M+ EG
Sbjct: 153 -----------------------EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 237 ITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAA 296
T + ++ +G A V G QVH +V+ G + + +SN+L+++Y KC ++ A
Sbjct: 190 -TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA 248
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+ +F + K VV+W S+I G A +G EAL ++ M V+ +E +F +I C+N+
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
+ L S+V+ YG T L+ +S+ + +A L + + + +W A
Sbjct: 309 KELRFTEQLHCSVVK-YGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 417 LLSACKHHGNTQMAVRIADKL--LCLKPEDPSSYILLS 452
++S + + AV + ++ ++P + + ++L+
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 3/242 (1%)
Query: 184 GYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
G S R A LF +SP ++ ++ +L+ G + G +A F+ + + G+ + D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCS 94
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
+ SSV+ A L G+Q+H I G+ V + +LVD Y K S+ + +F EM
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 304 SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR 363
++VV+WT++I G A++ +E L L+ M + +PN TF + + G+ +G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 364 ALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKH 423
+ +V++ G+ ++ L++L+ + G++ +A L V TW +++S
Sbjct: 215 QVHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISGYAA 272
Query: 424 HG 425
+G
Sbjct: 273 NG 274
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 334/578 (57%), Gaps = 42/578 (7%)
Query: 40 HEP---FPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISR 96
H P N L++ Y K LL DA QLFD +P R+++SW +++SA + + +AL +
Sbjct: 92 HRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 97 SLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK 156
+L +P+ + +S+++++C M + + +H + +D V+S L+D++AK
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDV-----RMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 157 FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGL 216
G P+ +AL +F E + W ++I G
Sbjct: 207 LGEPE-------------------------------DALSVFDEMVTGDAIVWNSIIGGF 235
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
Q+ A F +M++ G IA+ L+SV+ AC LA+ ELG Q H ++ Y+
Sbjct: 236 AQNSRSDVALELFKRMKRAGF-IAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQD 292
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS 336
+ ++NALVDMY KC L A +F +M +DV++W+++I G AQ+G ++EAL L++ M S
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 337 ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
+ KPN +T VG+++ACS+ GL+ G FRSM + YGI P +HY C++DL ++G LD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 397 EAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYA 456
+A L+ M PD TW LL AC+ N +A A K++ L PED +Y LLSN+YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 457 GASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDA 516
+ W++V ++R M + +KKEPG S I++ K+ H F G+ SHP E+ + +L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 517 EMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGD 576
+ GYVP+T++VL D++ ++ E L HSE+LA+A+GL+ +IRI KNLR+CGD
Sbjct: 533 RLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGD 592
Query: 577 CHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
CH KL S +E R I +RD RYHHF+DGKCSC D+W
Sbjct: 593 CHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Query: 15 SSVARQSPFLT--KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDL 72
SSV R ++ + LH IIK GL + L+D + K G +DAL +FD + D
Sbjct: 166 SSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
+ W S++ + AL + + + GF + +++++AC + L + G Q H
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL--GMQAH 283
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
H + Y D ++ + LVDMY K G + VF+ + + I+W+ MISG A++G
Sbjct: 284 VHIV--KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQ 341
Query: 193 EALRLF---RESPYK-NLFAWTALISGLVQSGNGVDAFYTFVKMRQ 234
EAL+LF + S K N ++ +G D +Y F M++
Sbjct: 342 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 240 ADPLVLSSVVGAC-ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
AD S ++ C +N AV E G + + G+ +F+ N L++MY K + L A
Sbjct: 59 ADSATYSELIKCCISNRAVHE-GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQ 117
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F +M +++V+SWT++I ++ ++AL L M+ V+PN T+ ++ +C+
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG--- 174
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
+S R L ++++ G++ + + L+D+F++ G ++A ++ M V+ D W +++
Sbjct: 175 MSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSII 232
Query: 419 SACKHHGNTQMAVRIADKL 437
+ + +A+ + ++
Sbjct: 233 GGFAQNSRSDVALELFKRM 251
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 370/659 (56%), Gaps = 72/659 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++LH I+KSG + N+L+ Y K + A ++FD + RD++SW S+++
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L + LS+ +L G + D ++ CA+ ++ G+ VH+ + + ++ +D
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD--SRLISLGRAVHSIGVKACFSREDR 332
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE----- 200
+TL+DMY+K G D +AVF +S + +S+T+MI+GYAR G EA++LF E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 201 -SP--------------YK-------------------NLFAWTALISGLVQSGNGVDAF 226
SP Y+ ++F AL+ + G+ +A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 227 YTFVKMRQEGI----TI---------------------------ADPLVLSSVVGACANL 255
F +MR + I TI D ++ V+ ACA+L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSII 315
+ ++ G+++HG ++ GY S ++N+LVDMYAKC L+ A +F +++ KD+VSWT +I
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G HG +EA+AL++ M A ++ +E++FV L+YACS+ GLV +G F M + I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
+P+++HY C++D+ +R+G L +A I MP+ PD W ALL C+ H + ++A ++A+
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 436 KLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFY 495
K+ L+PE+ Y+L++N+YA A WE V ++RK + + ++K PG S I++ ++F
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752
Query: 496 AGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYG 555
AG++S+P + I +RK+ A M + GY P T Y L D ++ EKE L HSE+LA+A G
Sbjct: 753 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 812
Query: 556 LLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
++ + G IIR+ KNLRVCGDCH + K +S + REI +RD+ R+H FKDG CSC FW
Sbjct: 813 IISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 192/411 (46%), Gaps = 38/411 (9%)
Query: 51 YGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVF 110
Y CG L++A ++FD + + W +++ + ++ + + ++ G + D + F
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 111 STLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI 170
S + K+ +++ +H G+Q+H L S + + V ++LV Y K D R VFD
Sbjct: 199 SCVSKSFSSLRSVH--GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD-- 254
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
E +++ +W ++I+G V +G FV
Sbjct: 255 -----------------------------EMTERDVISWNSIINGYVSNGLAEKGLSVFV 285
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
+M GI I D + SV CA+ + LG+ VH + + + N L+DMY+KC
Sbjct: 286 QMLVSGIEI-DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
DL +AK +F EMS + VVS+TS+I G A+ G A EA+ L+++M + P+ T ++
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 351 YACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
C+ L+ +G+ + + E D G + + L+D++++ G + EAE + M V
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRV-K 461
Query: 410 DEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASM 460
D +W ++ + A+ + + LL K P + + A AS+
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 104/220 (47%), Gaps = 6/220 (2%)
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
DP L SV+ CA+ + GK+V + G G+ + + L MY C DL A +F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
E+ + + W ++ A+ G ++ L+ M+S+ V+ + TF + + S++ V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 361 KGRALFRSMVED-YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
G L +++ +G + S+ + L+ + ++ +D A + M D +W ++++
Sbjct: 213 GGEQLHGFILKSGFGERNSVGN--SLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIIN 269
Query: 420 ACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGAS 459
+G + + + ++L E + I+ +V+AG +
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIV--SVFAGCA 307
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 344/617 (55%), Gaps = 9/617 (1%)
Query: 2 SLSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLD---AYGKCGLLQ 58
SL + Y S L ++Q K++HA+++K+GL Q L + L
Sbjct: 9 SLEHNLYETMSCLQRCSKQEEL--KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 59 DALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA 118
A +FD D W ++ + ++ P R+L + + +L + + F +L+KAC+
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
N+ + Q+HA Y ND ++L++ YA G +FD I + +SW
Sbjct: 127 NLSAF--EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
++I GY ++G+ AL LFR+ KN +WT +ISG VQ+ +A F +M+ +
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
D + L++ + ACA L E GK +H + + L+DMYAKC ++ A
Sbjct: 245 -PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F + +K V +WT++I G A HG EA++ + +M +KPN +TF ++ ACS GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
V +G+ +F SM DY +KP+++HY C++DL R+G LDEA+ I+ MP+ P+ W ALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 419 SACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKK 478
AC+ H N ++ I + L+ + P Y+ +N++A W+ ++ R+LM + V K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 479 EPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDM-DQQ 537
PG S I L +H F AG+ SHP ++I R + ++ + GYVP+ +L D+ D
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 538 EKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDA 597
E+E + HSE+LA+ YGL+K PGTIIRI+KNLRVC DCH V KLIS I R+I +RD
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 598 KRYHHFKDGKCSCNDFW 614
R+HHF+DGKCSC D+W
Sbjct: 604 TRFHHFRDGKCSCGDYW 620
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/590 (37%), Positives = 343/590 (58%), Gaps = 4/590 (0%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+K++A I SG+ ++ + L+D Y KC + A +LFD +L ++ S
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L AL + ++ G +PD + I +C+ + ++ GK H + L + + + D
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNGFESWDN 373
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ + L+DMY K D +FD +S+ ++W ++++GY +G A F P KN
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMR-QEGITIADPLVLSSVVGACANLAVWELGKQV 264
+ +W +ISGLVQ +A F M+ QEG+ AD + + S+ AC +L +L K +
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN-ADGVTMMSIASACGHLGALDLAKWI 492
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ + G + V + LVDM+++C D +A IF ++ +DV +WT+ I A G A
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E A+ L+DDM+ +KP+ V FVG + ACS+ GLV +G+ +F SM++ +G+ P HY C
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
++DL R+G L+EA LI MP+ P++ W +LL+AC+ GN +MA A+K+ L PE
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER 672
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMK 504
SY+LLSNVYA A W +++KVR M K ++K PG S I + ++H F +G+ SHP
Sbjct: 673 TGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEM 732
Query: 505 DEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTI 564
I ++ ++ G+VPD S VL D+D++EK L HSE+LA+AYGL+ + GT
Sbjct: 733 PNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTT 792
Query: 565 IRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IRIVKNLRVC DCH+ K S + +REI +RD R+H+ + GKCSC DFW
Sbjct: 793 IRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 201/452 (44%), Gaps = 71/452 (15%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H I+K G ++ N+L+ Y +CG L A ++FD + R++VSW S++ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 87 LPHRALSIS-RSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+ + R + + P+ +I ACA + L G++V+A S +D+
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET--GEKVYAFIRNSGIEVNDL 272
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ S LVDMY K D + +FD + N AM S Y R G EAL +F N
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF------N 326
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
L M G+ D + + S + +C+ L GK H
Sbjct: 327 L-------------------------MMDSGVR-PDRISMLSAISSCSQLRNILWGKSCH 360
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA- 324
G V+ G+ES I NAL+DMY KC A IF MS K VV+W SI+ G ++G+
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 325 ------------------------------EEALALYDDMVSAR-VKPNEVTFVGLIYAC 353
EEA+ ++ M S V + VT + + AC
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
++G + + ++ +E GI+ ++ T L+D+FSR G + A ++ ++ + D
Sbjct: 481 GHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL-TNRDVSA 538
Query: 414 WAALLSACKHHGNTQMAVRIADKLL--CLKPE 443
W A + A GN + A+ + D ++ LKP+
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 4/213 (1%)
Query: 192 SEALRLFRESP-YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVG 250
S A +F S Y F + +LI G SG +A F++M GI+ D +
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLS 142
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
ACA G Q+HGL++ +GY +F+ N+LV YA+C +L +A+ +F EMS ++VVS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 311 WTSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
WTS+I G A+ A++A+ L+ MV V PN VT V +I AC+ + + G ++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AF 261
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
+ + GI+ + + L+D++ + +D A+ L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 35/346 (10%)
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ L + A+ + +++ G PD + F + ACA G Q+H + YA D
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK--SRAKGNGIQIHGLIVKMGYAKDL 169
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V+++LV YA+ G D R V F E +
Sbjct: 170 FVQNSLVHFYAECGELDSARKV-------------------------------FDEMSER 198
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
N+ +WT++I G + DA F +M ++ + + + V+ ACA L E G++V
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ + G E + +ALVDMY KC+ + AK +F E ++ ++ + G
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
EAL +++ M+ + V+P+ ++ + I +CS + + G++ ++ + G +
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNA 377
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
L+D++ + D A + M + TW ++++ +G A
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAA 422
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K ++ I K+G+ TL+D + +CG + A+ +F++L +RD+ +W + + A
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL-LSPYAN 142
+A RA+ + ++ QG +PD F + AC++ G V QGK++ L L +
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL--VQQGKEIFYSMLKLHGVSP 605
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMISG 184
+DV +VD+ + GL + + + + N + W ++++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 327/553 (59%), Gaps = 34/553 (6%)
Query: 62 QLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
++F+ +P +D+VS+ ++++ + + AL + R + +PD F S+++ +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY- 255
Query: 122 PLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAM 181
+ V +GK++H + + +D + S+LVDMYAK
Sbjct: 256 -VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK------------------------- 289
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
S R ++ R+F ++ +W +L++G VQ+G +A F +M +
Sbjct: 290 ------SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK-PG 342
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
+ SSV+ ACA+LA LGKQ+HG V+ G+ S +FI++ALVDMY+KC ++ AA+ IF
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
M+ D VSWT+II+G A HG EA++L+++M VKPN+V FV ++ ACS+VGLV +
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
F SM + YG+ L+HY + DL R+G L+EA N I M V P W+ LLS+C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 422 KHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG 481
H N ++A ++A+K+ + E+ +Y+L+ N+YA W+ ++K+R M K ++K+P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 482 YSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKER 541
S I++ ++H F +G+ SHP D+I ++ + +M K GYV DTS VLHD+D++ K
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 542 QLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYH 601
LF HSERLAVA+G++ PGT IR+ KN+R+C DCH +K IS I REI VRD R+H
Sbjct: 643 LLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFH 702
Query: 602 HFKDGKCSCNDFW 614
HF G CSC D+W
Sbjct: 703 HFNRGNCSCGDYW 715
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 210/423 (49%), Gaps = 23/423 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+LHAQ I++ H + ++ Y LL +AL LF TL +++W SV+
Sbjct: 25 KQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+L +AL+ + G PDH VF +++K+C M L G+ VH + D
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF--GESVHGFIVRLGMDCDLY 141
Query: 146 VKSTLVDMYAKF---GLPDYGRAVFDSISSLNS------ISWTAMISGYARSGRRSEALR 196
+ L++MYAK G VFD + S + I + R R
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR----R 197
Query: 197 LFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP--LVLSSVVGACAN 254
+F P K++ ++ +I+G QSG DA +R+ G T P LSSV+ +
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM---VREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
GK++HG VI G +S V+I ++LVDMYAK + + ++ +F + +D +SW S+
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
+ G Q+G+ EAL L+ MV+A+VKP V F +I AC+++ + G+ L ++ G
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-G 373
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
++ + L+D++S+ G++ A + M V DE +W A++ HG+ AV +
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 435 DKL 437
+++
Sbjct: 433 EEM 435
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K+LH +++ G + + L+D Y KCG ++ A ++FD + D VSW +++
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
L H A+S+ + QG +P+ F ++ AC+++G
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 330/560 (58%), Gaps = 4/560 (0%)
Query: 56 LLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIK 115
LL A +F + + +L + ++ + P +A +L PD+ F LIK
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 116 ACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNS 175
A + M + V G+Q H+ + + ND V+++LV MYA G +F + +
Sbjct: 126 ASSEMECVLV--GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 176 ISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQE 235
+SWT+M++GY + G A +F E P++NLF W+ +I+G ++ A F M++E
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 236 GITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
G+ +A+ V+ SV+ +CA+L E G++ + V+ + + ALVDM+ +C D+
Sbjct: 244 GV-VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 296 AKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSN 355
A ++F + D +SW+SII G A HG A +A+ + M+S P +VTF ++ ACS+
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 356 VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWA 415
GLV KG ++ +M +D+GI+P L+HY C++D+ R+G L EAEN I M V P+ P
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 416 ALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
ALL ACK + NT++A R+ + L+ +KPE Y+LLSN+YA A W+ + +R +M K
Sbjct: 423 ALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKL 482
Query: 476 VKKEPGYSCIDLGKESHVFYAG-ETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDM 534
VKK PG+S I++ + + F G + HP +I ++ ++R GY +T D+
Sbjct: 483 VKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDV 542
Query: 535 DQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYV 594
D++EKE + HSE+LA+AYG++K PGT IRIVKNLRVC DCHTV KLIS + RE+ V
Sbjct: 543 DEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIV 602
Query: 595 RDAKRYHHFKDGKCSCNDFW 614
RD R+HHF++G CSC D+W
Sbjct: 603 RDRNRFHHFRNGVCSCRDYW 622
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 152/342 (44%), Gaps = 53/342 (15%)
Query: 46 TLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQP 105
+++ Y KCG++++A ++FD +PHR+L +W+ +++ N +A+ + + +G
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 106 DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRA 165
+ V ++I +CA++G L G++ + + + S + ++ + LVDM+ + G +
Sbjct: 248 NETVMVSVISSCAHLGALEF--GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 166 VFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDA 225
VF+ + +S+SW+++I G A G +A+ F S ++ G
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYF---------------SQMISLG----- 345
Query: 226 FYTFVKMRQEGITIADPLVLSSVVGACAN-------LAVWELGKQVHGLVIGLGYESCVF 278
I + ++V+ AC++ L ++E K+ HG+ L + C+
Sbjct: 346 ------------FIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCI- 392
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
VDM + L A+ +M K ++G + + E +M+ +
Sbjct: 393 -----VDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML-IK 446
Query: 339 VKPNEVTFVGL---IYACSNVGLVSKGRALFRSMVEDYGIKP 377
VKP + L IYAC+ G K +L M E KP
Sbjct: 447 VKPEHSGYYVLLSNIYACA--GQWDKIESLRDMMKEKLVKKP 486
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 53/96 (55%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++ + ++KS ++ + L+D + +CG ++ A+ +F+ LP D +SW+S++ +
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVH 328
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
H+A+ ++ GF P F+ ++ AC++ G
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/620 (37%), Positives = 350/620 (56%), Gaps = 52/620 (8%)
Query: 8 YALKSQLSSVAR-QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKC---GLLQDALQL 63
+ L S S+ A ++ L K+LH+ I+SGL + +L+D Y KC G + D ++
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSADGSVDDCRKV 327
Query: 64 FDTLPHRDLVSWASVLSA----CNLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACA 118
FD + ++SW ++++ CNLA A+++ ++ QG +P+HF FS+ KAC
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLAT---EAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
N+ V GKQV A++ V ++++ M+ K + + F+S+S N +S+
Sbjct: 385 NLSDPRV--GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSY 442
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+ G R+ +A +L E + L GV AF
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITEREL---------------GVSAF------------ 475
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+S++ AN+ G+Q+H V+ LG + NAL+ MY+KC + A
Sbjct: 476 -----TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASR 530
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F M ++V+SWTS+I G A+HG A L ++ M+ VKPNEVT+V ++ ACS+VGL
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
VS+G F SM ED+ IKP ++HY C++DL R+G L +A I TMP D W L
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650
Query: 419 SACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKK 478
AC+ H NT++ A K+L L P +P++YI LSN+YA A WE +++R+ M + + K
Sbjct: 651 GACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVK 710
Query: 479 EPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDM---- 534
E G S I++G + H FY G+T+HP +I + +L E+++ GYVPDT VLH +
Sbjct: 711 EGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEEN 770
Query: 535 DQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYV 594
D+ EKER L+ HSE++AVA+GL+ +R+ KNLRVCGDCH +K IST+ REI +
Sbjct: 771 DEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVL 830
Query: 595 RDAKRYHHFKDGKCSCNDFW 614
RD R+HHFKDGKCSCND+W
Sbjct: 831 RDLNRFHHFKDGKCSCNDYW 850
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 74/407 (18%)
Query: 57 LQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKA 116
++A ++FD + ++V+W +++ C P A+ ++ GF+ D F S++ A
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 117 CANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF---GLPDYGRAVFDSISSL 173
CA + L + GKQ+H+ + S +D V+ +LVDMYAK G D R VFD +
Sbjct: 279 CAELENLSL--GKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED- 333
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGN-GVDAFYTFVKM 232
++ +WTALI+G +++ N +A F +M
Sbjct: 334 ------------------------------HSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 233 RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSD 292
+G + SS AC NL+ +GKQV G G S ++N+++ M+ K
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 293 LVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA 352
+ A+ F +S K++VS+ + + GT ++ E+A L ++ + + TF L+
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP------ 406
+NVG + KG + S V G+ + L+ ++S+ G +D A + M
Sbjct: 484 VANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS 542
Query: 407 ----------------------------VSPDEPTWAALLSACKHHG 425
V P+E T+ A+LSAC H G
Sbjct: 543 WTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 221/494 (44%), Gaps = 68/494 (13%)
Query: 9 ALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL 67
S L S R F L K +HA++I+ + N+L+ Y K G A +F+T+
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 68 PH---RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
RD+VSW+++++ A+ + L G P+ + ++ +I+AC+N +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 125 VNQGKQVHAHFLLSP--YANDDVVKSTLVDMYAKFGLPDYGRA--VFDSISSLNSISWTA 180
V +V FL+ + +D V +L+DM+ K G + A VFD +S LN ++WT
Sbjct: 184 VG---RVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTL 239
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
MI+ + G EA+R F + +V SG D F
Sbjct: 240 MITRCMQMGFPREAIRFFLD---------------MVLSGFESDKF-------------- 270
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS---DLVAAK 297
LSSV ACA L LGKQ+H I G V S LVDMYAKCS + +
Sbjct: 271 ---TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCR 325
Query: 298 YIFCEMSRKDVVSWTSIIVGTAQHGQ-AEEALALYDDMVS-ARVKPNEVTFVGLIYACSN 355
+F M V+SWT++I G ++ A EA+ L+ +M++ V+PN TF AC N
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 356 -----VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD 410
VG G+A R + + + S ++ +F +S +++A+ ++ +
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANS------VISMFVKSDRMEDAQRAFESLS-EKN 438
Query: 411 EPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKL 470
++ L + N + A ++ ++ + E S +++ +G + NV +RK
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEI--TERELGVSAFTFASLLSGVA---NVGSIRKG 493
Query: 471 MMVKEVKKEPGYSC 484
+ + G SC
Sbjct: 494 EQIHSQVVKLGLSC 507
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
M ++GI D + SS++ +C + LGK VH +I E + N+L+ +Y+K
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 292 DLVAAKYIFCEMSR---KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
D A+ +F M R +DVVSW++++ +G+ +A+ ++ + + + PN+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
+I ACSN V GR +++ + + L+D+F + + E +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVR 468
+ TW +++ C G + A+R ++ E S LS+V++ + EN+S +
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE--SDKFTLSSVFSACAELENLSLGK 289
Query: 469 KL 470
+L
Sbjct: 290 QL 291
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 7 AYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
A+ S LS VA +++H+Q++K GLS ++P N L+ Y KCG + A ++F+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
+ +R+++SW S+++ R L ++ +G +P+ + ++ AC+++G
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/625 (36%), Positives = 351/625 (56%), Gaps = 57/625 (9%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA------CNLAN-----LPHRALS 93
N L+ Y K G + +A ++FD +P R++VSW +++ ++A +P +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN-K 141
Query: 94 ISRSLLHQGFQPDHFV-----FSTLIKACANMGPLHV-----NQGKQVHAHFLLSPYAND 143
+S +++ GF D + +I N+ + +G+ A + +
Sbjct: 142 VSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 144 DVVK-STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V+ +T+V Y + D R +FD + +SWT+M+ GY ++GR +A LF P
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Query: 203 YKNLFAWTALISGLVQSG-----------------------------NG--VDAFYTFVK 231
K + A A+ISGL Q G NG ++A F+
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
M+++G+ P L S++ CA+LA GKQVH ++ ++ V++++ L+ MY KC
Sbjct: 322 MQKQGVRPTFP-TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLI 350
+LV +K IF KD++ W SII G A HG EEAL ++ +M +S KPNEVTFV +
Sbjct: 381 ELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATL 440
Query: 351 YACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD 410
ACS G+V +G ++ SM +G+KP HY C++D+ R+G +EA +I +M V PD
Sbjct: 441 SACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 411 EPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKL 470
W +LL AC+ H +A A KL+ ++PE+ +YILLSN+YA W +V+++RKL
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 471 MMVKEVKKEPGYSCIDLGKESHVFY-AGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSY 529
M + V+K PG S ++ + H F G SHP ++ IL ++ +LD +R+ GY PD SY
Sbjct: 561 MKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSY 620
Query: 530 VLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIES 589
LHD+D++EK L +HSERLAVAY LLK G IR++KNLRVC DCHT +K+IS ++
Sbjct: 621 ALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKE 680
Query: 590 REIYVRDAKRYHHFKDGKCSCNDFW 614
REI +RDA R+HHF++G+CSC D+W
Sbjct: 681 REIILRDANRFHHFRNGECSCKDYW 705
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 165/393 (41%), Gaps = 69/393 (17%)
Query: 42 PFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQ 101
P N + + G + +A +LFD+ + + SW S++ A ANL R +R L +
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMV-AGYFANLMPRD---ARKLFDE 73
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
PD + S + LV Y K G D
Sbjct: 74 --MPDRNIISW-----------------------------------NGLVSGYMKNGEID 96
Query: 162 YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGN 221
R VFD + N +SWTA++ GY +G+ A LF + P KN +WT ++ G +Q G
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGR 156
Query: 222 GVDAFYTFVKMRQEGITIADPLVLSSVV-GACANLAVWELGKQVHGLVIGLGYESCVFIS 280
DA + E I D + +S++ G C V E + + E V
Sbjct: 157 IDDACKLY-----EMIPDKDNIARTSMIHGLCKEGRVDEARE-----IFDEMSERSVITW 206
Query: 281 NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
+V Y + + + A+ IF M K VSWTS+++G Q+G+ E+A L++ M VK
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVK 263
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
P + +I G ++K R +F SM E + ++ + R+G EA +
Sbjct: 264 P-VIACNAMISGLGQKGEIAKARRVFDSMKERND-----ASWQTVIKIHERNGFELEALD 317
Query: 401 LIRTMP---VSPDEPTWAALLSACK-----HHG 425
L M V P PT ++LS C HHG
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 177/414 (42%), Gaps = 71/414 (17%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N+++ Y + +DA +LFD +P R+++SW ++S + + + +R + +
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS----GYMKNGEIDEARKVFDLMPE 107
Query: 105 PDHFVFSTLIKACANMGPLHVNQG--------KQVHAHFLLSPYAN-------------- 142
+ ++ L+K + G + V + +V +L +
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 143 ---DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
D++ +++++ K G D R +FD +S + I+WT M++GY ++ R +A ++F
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
P K +WT+++ G VQ+G DA F M P++ AC
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP------VKPVI------AC------- 268
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
NA++ + ++ A+ +F M ++ SW ++I
Sbjct: 269 ---------------------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE 307
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
++G EAL L+ M V+P T + ++ C+++ + G+ + +V +
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR-CQFDVDV 366
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+ L+ ++ + G L +++ + P S D W +++S HG + A+++
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHGLGEEALKV 419
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 331/592 (55%), Gaps = 35/592 (5%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L ++LHA + +G S+ N +LD Y K + + LFD +P D VS+ V+S+ +
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
A+ +L R + GF +F F+T++ AN+ L + G+Q+H LL+ +
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM--GRQLHCQALLATADSI 385
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V ++LVDMYAK + + EA +F+ P
Sbjct: 386 LHVGNSLVDMYAKCEMFE-------------------------------EAELIFKSLPQ 414
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ +WTALISG VQ G F KMR + AD ++V+ A A+ A LGKQ
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR-ADQSTFATVLKASASFASLLLGKQ 473
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H +I G VF + LVDMYAKC + A +F EM ++ VSW ++I A +G
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
E A+ + M+ + ++P+ V+ +G++ ACS+ G V +G F++M YGI P +HY
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL-KP 442
C+LDL R+G EAE L+ MP PDE W+++L+AC+ H N +A R A+KL + K
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
D ++Y+ +SN+YA A WE V V+K M + +KK P YS +++ + HVF + + +HP
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Query: 503 MKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 562
DEI+ + +L AE+ + GY PDTS V+ D+D+Q K L +HSERLAVA+ L+ G
Sbjct: 714 NGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEG 773
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
I ++KNLR C DCH +KLIS I REI VRD R+HHF +G CSC D+W
Sbjct: 774 CPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 187/453 (41%), Gaps = 61/453 (13%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-- 102
NT++ + K G + A LFD +P R +V+W ++ + A + R +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 103 FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
PDH F+TL+ C + P N QVHA K G +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQ--NAVGQVHA-------------------FAVKLG---F 178
Query: 163 GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNG 222
F ++S++ ++ Y R A LF E P K+ + LI+G + G
Sbjct: 179 DTNPFLTVSNV-------LLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 223 VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNA 282
++ + F+KMRQ G +D S V+ A L + LG+Q+H L + G+ + N
Sbjct: 232 TESIHLFLKMRQSGHQPSD-FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ 290
Query: 283 LVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPN 342
++D Y+K ++ + +F EM D VS+ +I +Q Q E +L + +M
Sbjct: 291 ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR 350
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY-TCLLDLFSRSGHLDEAENL 401
F ++ +N+ + GR L + S+ H L+D++++ +EAE +
Sbjct: 351 NFPFATMLSIAANLSSLQMGRQLHCQAL--LATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 402 IRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMW 461
+++P +W AL+S G +++ K+ SN+ A S +
Sbjct: 409 FKSLP-QRTTVSWTALISGYVQKGLHGAGLKLFTKMRG------------SNLRADQSTF 455
Query: 462 ENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
V +K ++ + LGK+ H F
Sbjct: 456 ATV-----------LKASASFASLLLGKQLHAF 477
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 129 KQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS 188
++V A + + + D + +V+ + G R V+D + N++S MISG+ ++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 189 GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKM-RQEGITIADPLVLSS 247
G S A LF P + + WT L+ ++ + +AF F +M R T+ D + ++
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 248 VVGACANLAVWELGKQVHGLVIGLGYESCVF--ISNALVDMYAKCSDLVAAKYIFCEMSR 305
++ C + QVH + LG+++ F +SN L+ Y + L A +F E+
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
KD V++ ++I G + G E++ L+ M + +P++ TF G++ A + + G+ L
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP 406
++ G +LD +S+ + E L MP
Sbjct: 273 -HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 33/202 (16%)
Query: 15 SSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVS 74
+S + S L K+LHA II+SG ++ + L+D Y KCG ++DA+Q+F+ +P R+ VS
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Query: 75 WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH 134
W +++SA A+ ++ G QPD ++ AC++ G V QG +
Sbjct: 521 WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG--FVEQGTE---- 574
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
Y + P YG + + M+ R+GR +EA
Sbjct: 575 -------------------YFQAMSPIYG-------ITPKKKHYACMLDLLGRNGRFAEA 608
Query: 195 LRLFRESPYK-NLFAWTALISG 215
+L E P++ + W+++++
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNA 630
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 325/589 (55%), Gaps = 36/589 (6%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H+ IK GL N L+D Y + G L+D ++FD + RDL+SW S++ A L
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP--YANDDV 145
P RA+S+ + + QPD +L + +G + + Q F L + D
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ---GFTLRKGWFLEDIT 385
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ + +V MYAK GL D RAVF+ + P +
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWL-------------------------------PNTD 414
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ +W +ISG Q+G +A + M +EG A+ SV+ AC+ G ++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
G ++ G VF+ +L DMY KC L A +F ++ R + V W ++I HG E
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
+A+ L+ +M+ VKP+ +TFV L+ ACS+ GLV +G+ F M DYGI PSL+HY C+
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDP 445
+D++ R+G L+ A I++M + PD W ALLSAC+ HGN + ++ L ++PE
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
++LLSN+YA A WE V ++R + K ++K PG+S +++ + VFY G +HPM +
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTII 565
E+ + L A+++ GYVPD +VL D++ EKE L HSERLA+A+ L+ T I
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774
Query: 566 RIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
RI KNLRVCGDCH+V K IS I REI VRD+ R+HHFK+G CSC D+W
Sbjct: 775 RIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 208/458 (45%), Gaps = 53/458 (11%)
Query: 8 YALKSQLSSVARQSPFLTK---------KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQ 58
+ L S L+ R P + K K+H +K G +L+ Y + +
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 59 DALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA 118
+A LFD +P RD+ SW +++S + AL++S L D +L+ AC
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACT 258
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
G N+G +H++ + ++ V + L+D+YA+FG + VFD + + ISW
Sbjct: 259 EAGDF--NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISW 316
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
++I Y + + A+ LF+E MR I
Sbjct: 317 NSIIKAYELNEQPLRAISLFQE-------------------------------MRLSRIQ 345
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLG-YESCVFISNALVDMYAKCSDLVAAK 297
D L L S+ + L + V G + G + + I NA+V MYAK + +A+
Sbjct: 346 -PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 298 YIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNV 356
+F + DV+SW +II G AQ+G A EA+ +Y+ M + N+ T+V ++ ACS
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
G + +G L ++++ G+ + T L D++ + G L++A +L +P P W
Sbjct: 465 GALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNT 522
Query: 417 LLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLS 452
L++ HG+ + AV + ++L +KP+ + LLS
Sbjct: 523 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 194/454 (42%), Gaps = 87/454 (19%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K LHA+++ S Q+ L++ Y G + A FD + +RD+ +W ++S A
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 86 -NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
N S +L G PD+ F +++KAC V G ++H L + D
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT-----VIDGNKIHCLALKFGFMWDV 185
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V ++L+ +Y+++ R +FD E P +
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFD-------------------------------EMPVR 214
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
++ +W A+ISG QSGN +A G+ D + + S++ AC + G +
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H I G ES +F+SN L+D+YA+ L + +F M +D++SW SII + Q
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 325 EEALALYDDMVSARVKPNEVTFVGL---------IYACSNV------------------- 356
A++L+ +M +R++P+ +T + L I AC +V
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 357 --------GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM--- 405
GLV RA+F ++ + + ++ ++++G EA + M
Sbjct: 390 VVVMYAKLGLVDSARAVF-----NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 406 -PVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
++ ++ TW ++L AC G + +++ +LL
Sbjct: 445 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 144/309 (46%), Gaps = 45/309 (14%)
Query: 112 TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS 171
TL + C N+ K +HA ++S + + + LV++Y G R FD I
Sbjct: 59 TLFRYCTNL-----QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 172 SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVK 231
+ + +W MISGY R+G SE +R F +LF
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCF------SLF------------------------ 143
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
M G+T D SV+ AC + G ++H L + G+ V+++ +L+ +Y++
Sbjct: 144 MLSSGLT-PDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYK 199
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
+ A+ +F EM +D+ SW ++I G Q G A+EAL L + + + + VT V L+
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLS 255
Query: 352 ACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDE 411
AC+ G ++G + ++ +G++ L L+DL++ G L + + + M V D
Sbjct: 256 ACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DL 313
Query: 412 PTWAALLSA 420
+W +++ A
Sbjct: 314 ISWNSIIKA 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 6/160 (3%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
KLH +++K+GL +L D YGKCG L+DAL LF +P + V W ++++
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+A+ + + +L +G +PDH F TL+ AC++ G V++G+ + + Y +
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL--VDEGQWCF-EMMQTDYGITPSL 588
Query: 147 K--STLVDMYAKFGLPDYGRAVFDSISSLNSIS-WTAMIS 183
K +VDMY + G + S+S S W A++S
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/591 (35%), Positives = 336/591 (56%), Gaps = 37/591 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L ++H+ K+G H+ + Y KCG ++ LF D+V++ +++
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT 298
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+LS+ + L+ G + +L+ ++ ++ +H + L S + +
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA-----IHGYCLKSNFLSH 353
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + L +Y+K LN I A +LF ESP
Sbjct: 354 ASVSTALTTVYSK----------------LNEIE---------------SARKLFDESPE 382
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
K+L +W A+ISG Q+G DA F +M++ + +P+ ++ ++ ACA L LGK
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS-PNPVTITCILSACAQLGALSLGKW 441
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VH LV +ES +++S AL+ MYAKC + A+ +F M++K+ V+W ++I G HGQ
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+EAL ++ +M+++ + P VTF+ ++YACS+ GLV +G +F SM+ YG +PS++HY
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++D+ R+GHL A I M + P W LL AC+ H +T +A +++KL L P+
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPD 621
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
+ ++LLSN+++ + + VR+ +++ K PGY+ I++G+ HVF +G+ SHP
Sbjct: 622 NVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQ 681
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 563
EI + KL+ +MR+ GY P+T LHD++++E+E + HSERLA+A+GL+ PGT
Sbjct: 682 VKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGT 741
Query: 564 IIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IRI+KNLRVC DCHTV KLIS I R I VRDA R+HHFKDG CSC D+W
Sbjct: 742 EIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 171/411 (41%), Gaps = 45/411 (10%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
+ HAQII G L G + A +F ++ D+ + ++ ++
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 87 LPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
PH +LS+ L +P+ ++ I A + G G+ +H ++ ++ +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS--GFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ S +V MY KF + R VFD + P K+
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRM-------------------------------PEKD 184
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
W +ISG ++ V++ F + E T D L ++ A A L LG Q+H
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
L G S ++ + +Y+KC + +F E + D+V++ ++I G +G+ E
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS-LQHYTC 384
+L+L+ +++ + + T V L+ ++ L+ + Y +K + L H +
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA--------IHGYCLKSNFLSHASV 356
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDE--PTWAALLSACKHHGNTQMAVRI 433
L + L+E E+ + SP++ P+W A++S +G T+ A+ +
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 342/589 (58%), Gaps = 4/589 (0%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+K++A I SG+ ++ + L+D Y KC + A +LFD +L ++ S
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L AL + ++ G +PD + I +C+ + ++ GK H + L + + + D
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL--RNILWGKSCHGYVLRNGFESWDN 373
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ + L+DMY K D +FD +S+ ++W ++++GY +G A F P KN
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMR-QEGITIADPLVLSSVVGACANLAVWELGKQV 264
+ +W +ISGLVQ +A F M+ QEG+ AD + + S+ AC +L +L K +
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN-ADGVTMMSIASACGHLGALDLAKWI 492
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ + G + V + LVDM+++C D +A IF ++ +DV +WT+ I A G A
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E A+ L+DDM+ +KP+ V FVG + ACS+ GLV +G+ +F SM++ +G+ P HY C
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
++DL R+G L+EA LI MP+ P++ W +LL+AC+ GN +MA A+K+ L PE
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER 672
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMK 504
SY+LLSNVYA A W +++KVR M K ++K PG S I + ++H F +G+ SHP
Sbjct: 673 TGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEM 732
Query: 505 DEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTI 564
I ++ ++ G+VPD S VL D+D++EK L HSE+LA+AYGL+ + GT
Sbjct: 733 PNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTT 792
Query: 565 IRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDF 613
IRIVKNLRVC DCH+ K S + +REI +RD R+H+ + GKCSC DF
Sbjct: 793 IRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 201/452 (44%), Gaps = 71/452 (15%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H I+K G ++ N+L+ Y +CG L A ++FD + R++VSW S++ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 87 LPHRALSIS-RSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+ + R + + P+ +I ACA + L G++V+A S +D+
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET--GEKVYAFIRNSGIEVNDL 272
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ S LVDMY K D + +FD + N AM S Y R G EAL +F N
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF------N 326
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
L M G+ D + + S + +C+ L GK H
Sbjct: 327 L-------------------------MMDSGVR-PDRISMLSAISSCSQLRNILWGKSCH 360
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA- 324
G V+ G+ES I NAL+DMY KC A IF MS K VV+W SI+ G ++G+
Sbjct: 361 GYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVD 420
Query: 325 ------------------------------EEALALYDDMVSAR-VKPNEVTFVGLIYAC 353
EEA+ ++ M S V + VT + + AC
Sbjct: 421 AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASAC 480
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
++G + + ++ +E GI+ ++ T L+D+FSR G + A ++ ++ + D
Sbjct: 481 GHLGALDLAKWIYY-YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL-TNRDVSA 538
Query: 414 WAALLSACKHHGNTQMAVRIADKLL--CLKPE 443
W A + A GN + A+ + D ++ LKP+
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 4/213 (1%)
Query: 192 SEALRLFRESP-YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVG 250
S A +F S Y F + +LI G SG +A F++M GI+ D +
Sbjct: 84 SFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLS 142
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
ACA G Q+HGL++ +GY +F+ N+LV YA+C +L +A+ +F EMS ++VVS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 311 WTSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
WTS+I G A+ A++A+ L+ MV V PN VT V +I AC+ + + G ++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-AF 261
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
+ + GI+ + + L+D++ + +D A+ L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 35/346 (10%)
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ L + A+ + +++ G PD + F + ACA G Q+H + YA D
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK--SRAKGNGIQIHGLIVKMGYAKDL 169
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V+++LV YA+ G D R V F E +
Sbjct: 170 FVQNSLVHFYAECGELDSARKV-------------------------------FDEMSER 198
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
N+ +WT++I G + DA F +M ++ + + + V+ ACA L E G++V
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ + G E + +ALVDMY KC+ + AK +F E ++ ++ + G
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
EAL +++ M+ + V+P+ ++ + I +CS + + G++ ++ + G +
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNA 377
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
L+D++ + D A + M + TW ++++ +G A
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAA 422
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K ++ I K+G+ TL+D + +CG + A+ +F++L +RD+ +W + + A
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL-LSPYAN 142
+A RA+ + ++ QG +PD F + AC++ G V QGK++ L L +
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL--VQQGKEIFYSMLKLHGVSP 605
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMISG 184
+DV +VD+ + GL + + + + N + W ++++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 319/571 (55%), Gaps = 35/571 (6%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L++ Y + G L +A ++FD +P R L +W ++++ LS+ R + GF
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD + ++ A G V+ G+Q+H + + D VV S+L MY
Sbjct: 89 PDEYTLGSVFSGSA--GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM--------- 137
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
R+G+ + + R P +NL AW LI G Q+G
Sbjct: 138 ----------------------RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET 175
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
Y + M+ G + + +V+ +C++LA+ G+Q+H I +G S V + ++L+
Sbjct: 176 VLYLYKMMKISGCR-PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 234
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNE 343
MY+KC L A F E +D V W+S+I HGQ +EA+ L++ M ++ NE
Sbjct: 235 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 294
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
V F+ L+YACS+ GL KG LF MVE YG KP L+HYTC++DL R+G LD+AE +IR
Sbjct: 295 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 354
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWEN 463
+MP+ D W LLSAC H N +MA R+ ++L + P D + Y+LL+NV+A A W +
Sbjct: 355 SMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRD 414
Query: 464 VSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGY 523
VS+VRK M K VKKE G S + E H F G+ S EI +++L EM+ +GY
Sbjct: 415 VSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 474
Query: 524 VPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKL 583
PDT+ VLHDMD++EKE L HSE+LAVA+ L+ G IRI+KNLRVC DCH K
Sbjct: 475 KPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKY 534
Query: 584 ISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IS I++REI +RD R+HHF +GKCSC D+W
Sbjct: 535 ISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 177/366 (48%), Gaps = 11/366 (3%)
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT 210
+ MY+K G AV+ + N +S +I+GY R+G A ++F E P + L W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIG 270
A+I+GL+Q + F +M G + D L SV A L +G+Q+HG I
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 271 LGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALAL 330
G E + ++++L MY + L + + M +++V+W ++I+G AQ+G E L L
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFS 390
Y M + +PN++TFV ++ +CS++ + +G+ + ++ G + + L+ ++S
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYS 238
Query: 391 RSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYIL 450
+ G L +A DE W++++SA HG A+ + + + + +
Sbjct: 239 KCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 451 LSNVYAGASMWENVSKVRKL-MMVKEVKKEPG---YSC-IDLGKESHVFYAGET---SHP 502
L+ +YA + + MMV++ +PG Y+C +DL + E S P
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMP 357
Query: 503 MKDEIL 508
+K +I+
Sbjct: 358 IKTDIV 363
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 48/351 (13%)
Query: 1 MSLSRHAYALKSQLS-SVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
+ S Y L S S S +S + +++H IK GL ++L Y + G LQD
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
+ ++P R+LV+W +++ P L + + + G +P+ F T++ +C++
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG-LPDYGRAVFDSISSLNSISW 178
+ QG+Q+HA + ++ V S+L+ MY+K G L D +A F + + W
Sbjct: 205 LAIR--GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA-FSEREDEDEVMW 261
Query: 179 TAMISGYARSGRRSEALRLFRESPYK-----NLFAWTALISGLVQSGNGVDAFYTFVKMR 233
++MIS Y G+ EA+ LF + N A+ L+ SG ++
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG-----------LK 310
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
+G+ + D +V + +G GL + +CV VD+ + L
Sbjct: 311 DKGLELFDMMV------------------EKYGFKPGLKHYTCV------VDLLGRAGCL 346
Query: 294 VAAKYIFCEMSRK-DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
A+ I M K D+V W +++ H AE A ++ +++ ++ PN+
Sbjct: 347 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPND 395
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/596 (37%), Positives = 337/596 (56%), Gaps = 11/596 (1%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD--ALQLFDTLPHRDLVSWASVLSACN 83
K++H +++ GL Q L+ K G+ D A ++ + + R+ W +V+
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH-FLLSPYAN 142
+ A+++ + + P F FS L+KAC M L N G+Q HA F L +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL--NLGRQFHAQTFRLRGFCF 183
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V +T++DMY K D R VFD + + ISWT +I+ YAR G A LF P
Sbjct: 184 V-YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP 242
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
K++ AWTA+++G Q+ +A F +M + GI AD + ++ + ACA L +
Sbjct: 243 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR-ADEVTVAGYISACAQLGASKYAD 301
Query: 263 QVHGLVIGLGYESC--VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
+ + GY V I +AL+DMY+KC ++ A +F M+ K+V +++S+I+G A
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 321 HGQAEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
HG+A+EAL L+ MV+ +KPN VTFVG + ACS+ GLV +GR +F SM + +G++P+
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
HYTC++DL R+G L EA LI+TM V P W ALL AC+ H N ++A A+ L
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS-CIDLGKESHVFYAGE 498
L+P+ +YILLSNVYA A W V +VRKL+ K +KK P S +D + H F+ G
Sbjct: 482 LEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGN 541
Query: 499 TSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLK 558
+HPM ++I + +L + GY PD S V +D+ K L H+E+LA+A+ LL
Sbjct: 542 LNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLT 601
Query: 559 AVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ I I+KNLR+C DCH ++L S + + I +RD R+HHF+ G CSC DFW
Sbjct: 602 TNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 71/370 (19%)
Query: 123 LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP--DYGRAVFDSISSLNSISWTA 180
+++NQ KQ+H H L + + L+ K G+P Y R V + + N WTA
Sbjct: 60 INLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTA 119
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
+I GYA G+ EA+ ++ MR+E IT
Sbjct: 120 VIRGYAIEGKFDEAIAMYG-------------------------------CMRKEEITPV 148
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
S+++ AC + LG+Q H L V++ N ++DMY KC + A+ +F
Sbjct: 149 S-FTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVF 207
Query: 301 CEMSRKDVVSWTSII-------------------------------VGTAQHGQAEEALA 329
EM +DV+SWT +I G AQ+ + +EAL
Sbjct: 208 DEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE 267
Query: 330 LYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY---TCLL 386
+D M + ++ +EVT G I AC+ +G SK + + G PS H + L+
Sbjct: 268 YFDRMEKSGIRADEVTVAGYISACAQLG-ASKYADRAVQIAQKSGYSPS-DHVVIGSALI 325
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
D++S+ G+++EA N+ +M + + T+++++ HG Q A+ + ++ P+
Sbjct: 326 DMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPN 384
Query: 447 SYILLSNVYA 456
+ + + A
Sbjct: 385 TVTFVGALMA 394
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 341/592 (57%), Gaps = 36/592 (6%)
Query: 27 KLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++H I+ +G S +PF T L+ Y G + A ++FD R + W ++ A LA
Sbjct: 98 RVHRHILDNG-SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKAC--ANMGPLHVNQGKQVHAHFLLSPYAND 143
L + + G + D F ++ ++KAC + H+ +GK++HAH Y++
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ +TLVDMYA+FG DY VF + P
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGM-------------------------------PV 245
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKM-RQEGITIADPLVLSSVVGACANLAVWELGK 262
+N+ +W+A+I+ ++G +A TF +M R+ + + + + SV+ ACA+LA E GK
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+HG ++ G +S + + +ALV MY +C L + +F M +DVVSW S+I HG
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
++A+ ++++M++ P VTFV ++ ACS+ GLV +G+ LF +M D+GIKP ++HY
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C++DL R+ LDEA +++ M P W +LL +C+ HGN ++A R + +L L+P
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
++ +Y+LL+++YA A MW+ V +V+KL+ + ++K PG +++ ++ + F + + +P
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNP 545
Query: 503 MKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 562
+ ++I + KL +M+++GY+P T VL++++ +EKER + HSE+LA+A+GL+ G
Sbjct: 546 LMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG 605
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IRI KNLR+C DCH K IS +EI VRD R+H FK+G CSC D+W
Sbjct: 606 EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 51/333 (15%)
Query: 6 HAYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
+ Y LK+ ++S + + K++HA + + G S H TL+D Y + G + A +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQ--GFQPDHFVFSTLIKACANMGP 122
+P R++VSW+++++ AL R ++ + P+ ++++ACA++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 123 LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMI 182
L QGK +H + L + V S LV MY + G + G+ VFD + + +SW ++I
Sbjct: 301 L--EQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLI 358
Query: 183 SGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
S Y G +A+++F E NG P
Sbjct: 359 SSYGVHGYGKKAIQIFEE-----------------MLANGAS---------------PTP 386
Query: 243 LVLSSVVGACANLAVWELGKQV-------HGLVIGLGYESCVFISNALVDMYAKCSDL-V 294
+ SV+GAC++ + E GK++ HG+ + + +C +VD+ + + L
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC------MVDLLGRANRLDE 440
Query: 295 AAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
AAK + + W S++ HG E A
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 328/589 (55%), Gaps = 35/589 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H ++SG L+D Y KCG L+ A QLFD + R++VSW S++ A
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
P A+ I + +L +G +P + ACA++G L +G+ +H
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE--RGRFIH------------- 360
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ + GL ++S +NS +IS Y + A +F + +
Sbjct: 361 ------KLSVELGLDR-------NVSVVNS-----LISMYCKCKEVDTAASMFGKLQSRT 402
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
L +W A+I G Q+G +DA F +MR + D SV+ A A L++ K +H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK-PDTFTYVSVITAIAELSITHHAKWIH 461
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
G+V+ + VF++ ALVDMYAKC ++ A+ IF MS + V +W ++I G HG +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
AL L+++M +KPN VTF+ +I ACS+ GLV G F M E+Y I+ S+ HY +
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDP 445
+DL R+G L+EA + I MPV P + A+L AC+ H N A + A++L L P+D
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
++LL+N+Y ASMWE V +VR M+ + ++K PG S +++ E H F++G T+HP
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTII 565
+I + KL +++ GYVPDT+ VL ++ KE+ L HSE+LA+++GLL GT I
Sbjct: 702 KIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTI 760
Query: 566 RIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ KNLRVC DCH K IS + REI VRD +R+HHFK+G CSC D+W
Sbjct: 761 HVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 205/412 (49%), Gaps = 36/412 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H ++KSG S L + Y KC + +A ++FD +P RDLVSW ++++ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ AL + +S+ + +P +++ A + + + V GK++H + + S + +
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV--GKEIHGYAMRSGFDSLVN 272
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ + LVDMYAK G + R +FD + N +SW +MI Y
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY-------------------- 312
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
VQ+ N +A F KM EG+ D V+ + + ACA+L E G+ +H
Sbjct: 313 -----------VQNENPKEAMLIFQKMLDEGVKPTDVSVMGA-LHACADLGDLERGRFIH 360
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
L + LG + V + N+L+ MY KC ++ A +F ++ + +VSW ++I+G AQ+G+
Sbjct: 361 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 420
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
+AL + M S VKP+ T+V +I A + + + + + +V + ++ T L
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTAL 479
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+D++++ G + A LI M TW A++ HG + A+ + +++
Sbjct: 480 VDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 194/394 (49%), Gaps = 36/394 (9%)
Query: 32 IIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRA 91
+ K+GL Q F L+ + + G + +A ++F+ + + V + ++L + +A
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 92 LSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLV 151
L + + +P + F+ L+K C + L V GK++H + S ++ +
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV--GKEIHGLLVKSGFS---------L 168
Query: 152 DMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTA 211
D++A GL + YA+ + +EA ++F P ++L +W
Sbjct: 169 DLFAMTGLENM----------------------YAKCRQVNEARKVFDRMPERDLVSWNT 206
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
+++G Q+G A M +E + + + SV+ A + L + +GK++HG +
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLK-PSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALY 331
G++S V IS ALVDMYAKC L A+ +F M ++VVSW S+I Q+ +EA+ ++
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 332 DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSR 391
M+ VKP +V+ +G ++AC+++G + +GR + + VE G+ ++ L+ ++ +
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE-LGLDRNVSVVNSLISMYCK 384
Query: 392 SGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
+D A ++ + S +W A++ +G
Sbjct: 385 CKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNG 417
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 140/272 (51%), Gaps = 9/272 (3%)
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
T ++S + R G EA R+F K + ++ G + + A FV+MR + +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV- 131
Query: 239 IADPLV--LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAA 296
+P+V + ++ C + A +GK++HGL++ G+ +F L +MYAKC + A
Sbjct: 132 --EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+ +F M +D+VSW +I+ G +Q+G A AL + M +KP+ +T V ++ A S +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
L+S G+ + + G + T L+D++++ G L+ A L M + + +W +
Sbjct: 250 RLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNS 307
Query: 417 LLSACKHHGNTQMAVRIADKLL--CLKPEDPS 446
++ A + N + A+ I K+L +KP D S
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/592 (36%), Positives = 328/592 (55%), Gaps = 35/592 (5%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K ++ ++K+G N L+D Y KCG + A +F+++ +D VSW S++S
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ A+ + + ++ Q DH + LI + L GK +H++ + S D
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF--GKGLHSNGIKSGICID 442
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + L+DMYAK G ++L++F
Sbjct: 443 LSVSNALIDMYAK-------------------------------CGEVGDSLKIFSSMGT 471
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ W +IS V+ G+ +MR+ + + D + CA+LA LGK+
Sbjct: 472 GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV-VPDMATFLVTLPMCASLAAKRLGKE 530
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H ++ GYES + I NAL++MY+KC L + +F MSR+DVV+WT +I +G+
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
E+AL + DM + + P+ V F+ +IYACS+ GLV +G A F M Y I P ++HY
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++DL SRS + +AE I+ MP+ PD WA++L AC+ G+ + A R++ +++ L P+
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
DP IL SN YA W+ VS +RK + K + K PGYS I++GK HVF +G+ S P
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQ 770
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLF-WHSERLAVAYGLLKAVPG 562
+ I + L + M K GY+PD V +++++E++R+L HSERLA+A+GLL PG
Sbjct: 771 SEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPG 830
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
T ++++KNLRVCGDCH V KLIS I REI VRDA R+H FKDG CSC D W
Sbjct: 831 TPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 199/410 (48%), Gaps = 37/410 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
++ QI+ G N L+D Y + GLL A Q+FD +P RDLVSW S++S +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
AL I L + PD F S+++ A N+ L V QG+ +H L S + VV
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL--LVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
+ LV MY KF P R VFD + +S+S+ MI GY + E++R+F E+
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN------ 299
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+D F D L +SSV+ AC +L L K ++
Sbjct: 300 ---------------LDQFK------------PDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
++ G+ + N L+D+YAKC D++ A+ +F M KD VSW SII G Q G EA
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
+ L+ M+ + + +T++ LI + + + G+ L + ++ GI L L+D
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALID 451
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
++++ G + ++ + +M + D TW ++SAC G+ +++ ++
Sbjct: 452 MYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 209/432 (48%), Gaps = 41/432 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL-PHRDLVSWASVLSACNL 84
+++HA +I GL + F L+D Y +L +F + P +++ W S++ A +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
L AL L PD + F ++IKACA G G V+ L + +D
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA--GLFDAEMGDLVYEQILDMGFESDL 141
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V + LVDMY++ GL + A ++F E P +
Sbjct: 142 FVGNALVDMYSRMGL-------------------------------LTRARQVFDEMPVR 170
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
+L +W +LISG G +A + +++ I + D +SSV+ A NL V + G+ +
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWI-VPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
HG + G S V ++N LV MY K A+ +F EM +D VS+ ++I G +
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYT 383
EE++ ++ + + + KP+ +T ++ AC ++ +S + ++ M++ + ++ ++++
Sbjct: 290 EESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN-- 346
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
L+D++++ G + A ++ +M D +W +++S G+ A+++ ++ ++ +
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 444 -DPSSYILLSNV 454
D +Y++L +V
Sbjct: 406 ADHITYLMLISV 417
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 345/609 (56%), Gaps = 24/609 (3%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGL----LQDALQLFDTLPHRDLVSWASVLSAC 82
++HA IKSG + +L L L A ++F+ +P R+ SW +++
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 83 NLANLPHRALSIS---RSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
+ ++ ++I+ + + +P+ F F +++KACA G + +GKQ+H L
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK--IQEGKQIHGLALKYG 158
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVF-------DSISSLNS-------ISWTAMISGY 185
+ D+ V S LV MY G R +F D + + + W MI GY
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
R G A LF + +++ +W +ISG +G DA F +M++ I + + L
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR-PNYVTL 277
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
SV+ A + L ELG+ +H G + +AL+DMY+KC + A ++F + R
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
++V++W+++I G A HGQA +A+ + M A V+P++V ++ L+ ACS+ GLV +GR
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRY 397
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
F MV G++P ++HY C++DL RSG LDEAE I MP+ PD+ W ALL AC+ G
Sbjct: 398 FSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
N +M R+A+ L+ + P D +Y+ LSN+YA W VS++R M K+++K+PG S I
Sbjct: 458 NVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Query: 486 DLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFW 545
D+ H F + SHP EI ++ ++ ++R GY P T+ VL ++++++KE L +
Sbjct: 518 DIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHY 577
Query: 546 HSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKD 605
HSE++A A+GL+ PG IRIVKNLR+C DCH+ +KLIS + R+I VRD KR+HHF+D
Sbjct: 578 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 637
Query: 606 GKCSCNDFW 614
G CSC D+W
Sbjct: 638 GSCSCMDYW 646
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/636 (34%), Positives = 339/636 (53%), Gaps = 77/636 (12%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLL-------------------------- 57
L K+LH + S + Q+ N L+D Y KCG++
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 58 -----QDALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHF 108
+DA++LF+ + D+V+W++ +S L + AL + R +L G +P+
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 109 VFSTLIKACANMGPLHVNQGKQVHAHFLLSP-------YANDDVVKSTLVDMYAKFGLPD 161
+++ CA++G L GK++H + + P + ++++V + L+DMYAK D
Sbjct: 367 TLISVLSGCASVGALM--HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 162 YGRAVFDSIS--SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS 219
RA+FDS+S + ++WT MI GY++ G ++AL L E
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE------------------- 465
Query: 220 GNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC-VF 278
F + R TI+ LV ACA+LA +GKQ+H + + +F
Sbjct: 466 -----MFEEDCQTRPNAFTISCALV------ACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
+SN L+DMYAKC + A+ +F M K+ V+WTS++ G HG EEAL ++D+M
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 339 VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEA 398
K + VT + ++YACS+ G++ +G F M +G+ P +HY CL+DL R+G L+ A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 399 ENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGA 458
LI MP+ P W A LS C+ HG ++ A+K+ L SY LLSN+YA A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 459 SMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEM 518
W++V+++R LM K VKK PG S ++ K + F+ G+ +HP EI ++ +
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 519 RKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCH 578
+ GYVP+T + LHD+D +EK+ LF HSE+LA+AYG+L G IRI KNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 579 TVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
T +S I +I +RD+ R+HHFK+G CSC +W
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 220/427 (51%), Gaps = 24/427 (5%)
Query: 29 HAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLP 88
HA + +G + N L+ Y +C L DA ++FD + D+VSW S++ + P
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 89 HRALSI-SRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
AL + SR G +PD+ ++ CA++G + GKQ+H + S + V
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVG 267
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF----RESPY 203
+ LVDMYAK G+ D VF ++S + +SW AM++GY++ GR +A+RLF E
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
++ W+A ISG Q G G +A +M GI + + L SV+ CA++ GK+
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK-PNEVTLISVLSGCASVGALMHGKE 386
Query: 264 VHGLVI---------GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK--DVVSWT 312
+H I G G E+ V N L+DMYAKC + A+ +F +S K DVV+WT
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVI--NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 313 SIIVGTAQHGQAEEALALYDDMVS--ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
+I G +QHG A +AL L +M + +PN T + AC+++ + G+ + +
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 371 EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
+ L CL+D++++ G + +A + M ++ +E TW +L++ HG + A
Sbjct: 505 RNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 431 VRIADKL 437
+ I D++
Sbjct: 564 LGIFDEM 570
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 217/518 (41%), Gaps = 105/518 (20%)
Query: 6 HAYALKSQLSSVARQ--SPFL--------TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCG 55
H Y S S+ A + PF+ K +H +++ G+ + L+ Y G
Sbjct: 15 HQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLN-LTSHLISTYISVG 73
Query: 56 LLQDALQLFDTLPHRD--LVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTL 113
L A+ L P D + W S++ + ++ L + + + PD++ F +
Sbjct: 74 CLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFV 133
Query: 114 IKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL 173
KAC + V G+ HA L++ + ++ V + LV MY++ R VFD +S
Sbjct: 134 FKACGEISS--VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMR 233
+ +SW ++I YA+ G+ AL +F +M
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFS-------------------------------RMT 220
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
E D + L +V+ CA+L LGKQ+H + +F+ N LVDMYAKC +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 294 VAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD--------------------- 332
A +F MS KDVVSW +++ G +Q G+ E+A+ L++
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 333 --------------DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
M+S+ +KPNEVT + ++ C++VG + G+ + Y IK
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE-----IHCYAIKYP 395
Query: 379 LQH-----------YTCLLDLFSRSGHLDEAENLIRTM-PVSPDEPTWAALLSACKHHGN 426
+ L+D++++ +D A + ++ P D TW ++ HG+
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 427 TQMAVRIADKLLCLKPED----PSSYILLSNVYAGASM 460
A+ + ++ ED P+++ + + A AS+
Sbjct: 456 ANKALELLSEMF---EEDCQTRPNAFTISCALVACASL 490
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/600 (35%), Positives = 339/600 (56%), Gaps = 41/600 (6%)
Query: 23 FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
F K+ H Q G + L+ Y CG L+DA ++FD +P R++VSW S++
Sbjct: 93 FSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVF------STLIKACANMGPLHVNQGKQVHAHFL 136
+L A+S+ + LL D +F ++I AC+ + + + +H+ +
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE--SIHSFVI 210
Query: 137 LSPYANDDVVKSTLVDMYAKFGLPD--YGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
+ V +TL+D YAK G R +FD I + +S+ +++S YA+SG +EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
+FR ++ + + + + LS+V+ A ++
Sbjct: 271 FEVFR-------------------------------RLVKNKVVTFNAITLSTVLLAVSH 299
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
+GK +H VI +G E V + +++DMY KC + A+ F M K+V SWT++
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
I G HG A +AL L+ M+ + V+PN +TFV ++ ACS+ GL +G F +M +G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
++P L+HY C++DL R+G L +A +LI+ M + PD W++LL+AC+ H N ++A
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISV 479
Query: 435 DKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
+L L + Y+LLS++YA A W++V +VR +M + + K PG+S ++L E HVF
Sbjct: 480 ARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVF 539
Query: 495 YAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAY 554
G+ HP +++I + +L+ ++ + GYV +TS V HD+D++EKE L HSE+LA+A+
Sbjct: 540 LIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAF 599
Query: 555 GLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
G++ VPG+ + +VKNLRVC DCH V+KLIS I RE VRDAKR+HHFKDG CSC D+W
Sbjct: 600 GIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 189/408 (46%), Gaps = 40/408 (9%)
Query: 58 QDALQLFDT-LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKA 116
Q+ LF+ + D+ SW SV++ + AL S+ P F IKA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 117 CANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI 176
C+++ + GKQ H + Y +D V S L+ MY+ G + R VFD I N +
Sbjct: 86 CSSL--FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 177 SWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
SWT+MI GY +G +A+ LF++ LV + DA +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDL--------------LVDENDDDDAMFL-------- 181
Query: 237 ITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSD--LV 294
D + L SV+ AC+ + L + +H VI G++ V + N L+D YAK + +
Sbjct: 182 ----DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 295 AAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP-NEVTFVGLIYAC 353
A+ IF ++ KD VS+ SI+ AQ G + EA ++ +V +V N +T ++ A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
S+ G + G+ + ++ G++ + T ++D++ + G ++ A M + + +
Sbjct: 298 SHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRS 355
Query: 414 WAALLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLSNVYAGAS 459
W A+++ HG+ A+ + ++ ++P +YI +V A S
Sbjct: 356 WTAMIAGYGMHGHAAKALELFPAMIDSGVRP----NYITFVSVLAACS 399
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 6 HAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
+A L + L +V+ + K +H Q+I+ GL +++D Y KCG ++ A + F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
D + ++++ SW ++++ + +AL + +++ G +P++ F +++ AC++ G LH
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG-LH 404
Query: 125 VNQGKQVHA---HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSIS 177
V + +A F + P +VD+ + G + + +D I + +SI
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEH---YGCMVDLLGRAG---FLQKAYDLIQRMKMKPDSII 458
Query: 178 WTAMISG 184
W+++++
Sbjct: 459 WSSLLAA 465
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/593 (36%), Positives = 333/593 (56%), Gaps = 37/593 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K +H QI+K+ LL Y + G + DA ++F+ +P D+V W+ +++
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ A+ + + P+ F S+++ CA +G G+Q+H + + D
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA-IGKCS-GLGEQLHGLVVKVGFDLD 382
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + L+D+YAK + A++LF E
Sbjct: 383 IYVSNALIDVYAK-------------------------------CEKMDTAVKLFAELSS 411
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
KN +W +I G G G AF F + + +++ + + SS +GACA+LA +LG Q
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTE-VTFSSALGACASLASMDLGVQ 470
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VHGL I V +SN+L+DMYAKC D+ A+ +F EM DV SW ++I G + HG
Sbjct: 471 VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGL 530
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+AL + D M KPN +TF+G++ CSN GL+ +G+ F SM+ D+GI+P L+HYT
Sbjct: 531 GRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++ L RSG LD+A LI +P P W A+LSA + N + A R A+++L + P+
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK 650
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
D ++Y+L+SN+YAGA W NV+ +RK M VKKEPG S I+ + H F G + HP
Sbjct: 651 DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPD 710
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 563
I G++ L+ + + GYVPD + VL DMD +EK+++L+ HSERLA+AYGL++ +P +
Sbjct: 711 MKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR-MPSS 769
Query: 564 IIRIV--KNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
RI+ KNLR+C DCH+ +K+IS+I R++ +RD R+HHF G CSC D W
Sbjct: 770 RNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 202/413 (48%), Gaps = 46/413 (11%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
LH+ I+K G + L++AY CG + A +F+ + +D+V WA ++S
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+L + + GF P+++ F T +KA +G +G VH L + Y D V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG--VHGQILKTCYVLDPRVG 285
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
L+ +Y + G S+A ++F E P ++
Sbjct: 286 VGLLQLYTQLG-------------------------------DMSDAFKVFNEMPKNDVV 314
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
W+ +I+ Q+G +A F++MR E + + LSS++ CA LG+Q+HGL
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
V+ +G++ +++SNAL+D+YAKC + A +F E+S K+ VSW ++IVG G+ +A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACS-----NVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+++ + + +V EVTF + AC+ ++G+ G A+ + + + S
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS---- 489
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
L+D++++ G + A+++ M + D +W AL+S HG + A+RI D
Sbjct: 490 --LIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHGLGRQALRILD 539
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
S L+ + +++ Y ++G +AL LF E P +N ++ L G D +
Sbjct: 80 SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYS 135
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
++ +EG + +P V +S + +L E+ +H ++ LGY+S F+ AL++ Y+ C
Sbjct: 136 RLHREGHEL-NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
+ +A+ +F + KD+V W I+ ++G E++L L M A PN TF +
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 351 YACSNVGLVSKGRALFRSMVED-YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
A +G + + +++ Y + P + LL L+++ G + +A + MP +
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKND 312
Query: 410 DEPTWAALLSACKHHGNTQMAVRI 433
P W+ +++ +G AV +
Sbjct: 313 VVP-WSFMIARFCQNGFCNEAVDL 335
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/532 (37%), Positives = 319/532 (59%), Gaps = 8/532 (1%)
Query: 89 HRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKS 148
H +S+ + + PD F L+ + N PLH+ G++ HA LL D V++
Sbjct: 44 HSPISVYLRMRNHRVSPDFHTFPFLLPSFHN--PLHLPLGQRTHAQILLFGLDKDPFVRT 101
Query: 149 TLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFA 208
+L++MY+ G + VFD S + +W ++++ YA++G +A +LF E P +N+ +
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVIS 161
Query: 209 WTALISGLVQSGNGVDAFYTFVKMR----QEGITIADPLVLSSVVGACANLAVWELGKQV 264
W+ LI+G V G +A F +M+ E + +S+V+ AC L E GK V
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV 221
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM-SRKDVVSWTSIIVGTAQHGQ 323
H + E + + AL+DMYAKC L AK +F + S+KDV +++++I A +G
Sbjct: 222 HAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGL 281
Query: 324 AEEALALYDDMVSA-RVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+E L+ +M ++ + PN VTFVG++ AC + GL+++G++ F+ M+E++GI PS+QHY
Sbjct: 282 TDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY 341
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C++DL+ RSG + EAE+ I +MP+ PD W +LLS + G+ + +L+ L P
Sbjct: 342 GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDP 401
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
+ +Y+LLSNVYA W V +R M VK + K PG S +++ H F G+ S
Sbjct: 402 MNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQ 461
Query: 503 MKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 562
+ I ++ ++ +R+ GYV DT VL D+++++KE L +HSE+LA+A+ L+K PG
Sbjct: 462 ESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPG 521
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
T +RI+KNLR+CGDCH V+K+IS + SREI VRD R+HHF+DG CSC DFW
Sbjct: 522 TPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 41/293 (13%)
Query: 38 SQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRS 97
S+ P N++++AY K GL+ DA +LFD +P R+++SW+ +++ + AL + R
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 98 LL----HQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVD 152
+ ++ F +P+ F ST++ AC +G L QGK VHA+ D V+ + L+D
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALE--QGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 153 MYAKFGLPDYGRAVFDSISSLNSI-SWTAMISGYARSGRRSEALRLFRESPYKNLFAWTA 211
MYAK G + + VF+++ S + +++AMI A G E +LF E
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSE----------- 291
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI-G 270
+ S N TFV ++GAC + + GK ++I
Sbjct: 292 ----MTTSDNINPNSVTFV----------------GILGACVHRGLINEGKSYFKMMIEE 331
Query: 271 LGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK-DVVSWTSIIVGTAQHG 322
G + +VD+Y + + A+ M + DV+ W S++ G+ G
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 327/560 (58%), Gaps = 5/560 (0%)
Query: 57 LQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG--FQPDHFVFSTLI 114
L A Q+ D L + S++ A + +P ++ R +L G +PD++ + L+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 115 KACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLN 174
+AC G G QVH + + ND V++ L+ +YA+ G D VF+SI +
Sbjct: 116 QACT--GLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 175 SISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQ 234
+ TAM++ AR G A +LF P ++ AW A+ISG Q G +A F M+
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 235 EGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLV 294
EG+ + + + + SV+ AC L + G+ H + + V ++ LVD+YAKC D+
Sbjct: 234 EGVKV-NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDME 292
Query: 295 AAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS 354
A +F M K+V +W+S + G A +G E+ L L+ M V PN VTFV ++ CS
Sbjct: 293 KAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCS 352
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTW 414
VG V +G+ F SM ++GI+P L+HY CL+DL++R+G L++A ++I+ MP+ P W
Sbjct: 353 VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVW 412
Query: 415 AALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVK 474
++LL A + + N ++ V + K+L L+ + +Y+LLSN+YA ++ W+NVS VR+ M K
Sbjct: 413 SSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSK 472
Query: 475 EVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDM 534
V+K+PG S +++ E H F+ G+ SHP +I + + + +R GY DT+ V+ D+
Sbjct: 473 GVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDI 532
Query: 535 DQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYV 594
D++EKE L HSE+ A+A+G++ IRIVKNLRVCGDCH V +IS I +REI V
Sbjct: 533 DEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIV 592
Query: 595 RDAKRYHHFKDGKCSCNDFW 614
RD R+HHFKDG CSCN FW
Sbjct: 593 RDRNRFHHFKDGHCSCNGFW 612
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/609 (36%), Positives = 345/609 (56%), Gaps = 43/609 (7%)
Query: 39 QHEPFP-NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRS 97
Q + FP N ++ + G + AL++F + ++ ++W S+L ++ P R + +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLL--IGISKDPSRMME-AHQ 114
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF 157
L + +PD F ++ ++ +VN K + F P+ D +T++ YA+
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVR----NVNFEK-AQSFFDRMPF-KDAASWNTMITGYARR 168
Query: 158 GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY-------------- 203
G + R +F S+ N +SW AMISGY G +A F+ +P
Sbjct: 169 GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYM 228
Query: 204 ------------------KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
KNL W A+ISG V++ D F M +EGI + L
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR-PNSSGL 287
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
SS + C+ L+ +LG+Q+H +V + V +L+ MY KC +L A +F M +
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
KDVV+W ++I G AQHG A++AL L+ +M+ +++P+ +TFV ++ AC++ GLV+ G A
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
F SMV DY ++P HYTC++DL R+G L+EA LIR+MP P + LL AC+ H
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
N ++A A+KLL L ++ + Y+ L+N+YA + WE+V++VRK M V K PGYS I
Sbjct: 468 NVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Query: 486 DLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFW 545
++ + H F + + HP D I +++L+ +M+ GY P+ + LH++++++KE+ L W
Sbjct: 528 EIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLW 587
Query: 546 HSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKD 605
HSE+LAVA+G +K G+ I++ KNLR+CGDCH +K IS IE REI VRD R+HHFKD
Sbjct: 588 HSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKD 647
Query: 606 GKCSCNDFW 614
G CSC D+W
Sbjct: 648 GSCSCGDYW 656
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 182/452 (40%), Gaps = 86/452 (19%)
Query: 94 ISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ----------VHAHFLLSPYAND 143
+SR +HQ F+ F F +++ N + V V + +L P D
Sbjct: 2 LSRFNIHQPFKRCKFRF--FLRSIGNPDTILVESCSSSSCSSPEPSLVRSDYLTKPSDQD 59
Query: 144 DVVK-STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS-GRRSEALRLFRES 201
+ + ++ + G D VF + + N+I+W +++ G ++ R EA +LF E
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
P + F++ ++S V++ N A F +M D ++++ A E
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM-----PFKDAASWNTMITGYARRGEMEKA 174
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+++ ++ E NA++ Y +C DL A + F + VV+WT++I G +
Sbjct: 175 RELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKA 230
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS--- 378
+ E A A++ DM V N VT+ +I G LFR+M+E+ GI+P+
Sbjct: 231 KKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE-GIRPNSSG 286
Query: 379 --------------------------------LQHYTCLLDLFSRSGHLDEAENLIRTMP 406
+ T L+ ++ + G L +A L M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 407 VSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYI----------LLSNVYA 456
D W A++S HGN ADK LCL E + I LL+ +A
Sbjct: 347 -KKDVVAWNAMISGYAQHGN-------ADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 457 GASMWENVSKVRKLMMVKEVKKEPG---YSCI 485
G N+ MV++ K EP Y+C+
Sbjct: 399 GLV---NIGMAYFESMVRDYKVEPQPDHYTCM 427
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 34/202 (16%)
Query: 31 QIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP---------------------- 68
++ S + ++E N ++ Y +CG L+ A F P
Sbjct: 176 ELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVEL 235
Query: 69 ----------HRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA 118
+++LV+W +++S + P L + R++L +G +P+ S+ + C+
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
+ L + G+Q+H S ND ++L+ MY K G +F+ + + ++W
Sbjct: 296 ELSALQL--GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 179 TAMISGYARSGRRSEALRLFRE 200
AMISGYA+ G +AL LFRE
Sbjct: 354 NAMISGYAQHGNADKALCLFRE 375
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 32/181 (17%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +++H + KS L +L+ Y KCG L DA +LF+ + +D+V+W +++S
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+AL + R ++ +PD F ++ AC + G +++ A+F
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM-----AYF-------- 408
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
++V Y PD+ +T M+ R+G+ EAL+L R P+
Sbjct: 409 ----ESMVRDYKVEPQPDH---------------YTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 204 K 204
+
Sbjct: 450 R 450
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
LH ++ SGL ++ N L+ YGK G + ++ ++ +P RD+V+W +++
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
P +AL+ +++ +G ++ +++ AC G L + +GK +HA+ + + + +D+ VK
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVK 502
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
++L+ MYAK G + +F+ + + N I+W AM++ A G E L+L
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS-------- 554
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
KMR G+++ D S + A A LAV E G+Q+HGL
Sbjct: 555 -----------------------KMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGL 590
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
+ LG+E FI NA DMY+KC ++ + + + SW +I +HG EE
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 650
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
A + +M+ +KP VTFV L+ ACS+ GLV KG A + + D+G++P+++H C++D
Sbjct: 651 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
L RSG L EAE I MP+ P++ W +LL++CK HGN + A+ L L+PED S
Sbjct: 711 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770
Query: 448 YILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEI 507
Y+L SN++A WE+V VRK M K +KK+ S + L + F G+ +HP EI
Sbjct: 771 YVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 830
Query: 508 LGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRI 567
+ + +++ GYV DTS L D D+++KE L+ HSERLA+AY L+ G+ +RI
Sbjct: 831 YAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRI 890
Query: 568 VKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
KNLR+C DCH+V K +S + R I +RD R+HHF+ G CSC D+W
Sbjct: 891 FKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 177/389 (45%), Gaps = 39/389 (10%)
Query: 51 YGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVF 110
Y K G ++ A LFD +P R+ VSW +++S L + R + G +P FV
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 111 STLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI 170
++L+ AC G + +G QVH S +D V + ++ +Y +GL R VF+ +
Sbjct: 62 ASLVTACGRSGSM-FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
N +SWT+++ GY+ G E + +++
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYK------------------------------- 149
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
MR EG+ + +S V+ +C L LG+Q+ G V+ G ES + + N+L+ M
Sbjct: 150 GMRGEGVGCNEN-SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 208
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
++ A YIF +MS +D +SW SI AQ+G EE+ ++ M + N T L+
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 351 YACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD 410
+V GR + +V G + LL +++ +G EA + + MP + D
Sbjct: 269 SVLGHVDHQKWGRGI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKD 326
Query: 411 EPTWAALLSACKHHGNTQMAVRIADKLLC 439
+W +L+++ + G + A+ LLC
Sbjct: 327 LISWNSLMASFVNDGRSLDAL----GLLC 351
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 220/503 (43%), Gaps = 76/503 (15%)
Query: 7 AYALKSQLSSVARQSPFLTK--KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
++ + S +++ R + ++H + KSGL +L YG GL+ + ++F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ +P R++VSW S++ + P + I + + +G + S +I +C +
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
+ G+Q+ + S + V+++L+ M G DY +FD +S ++ISW ++ +
Sbjct: 178 L--GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 185 YARSGRRSEALRLF----------RESPYKNLFA---------WTALISGLV-------- 217
YA++G E+ R+F + L + W I GLV
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 218 ------------QSGNGVDAFYTFVKMRQEGITIADPLVLSSV----------------- 248
+G V+A F +M + + + L+ S V
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 249 -------------VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
+ AC +E G+ +HGLV+ G I NALV MY K ++
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 296 AKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSN 355
++ + +M R+DVV+W ++I G A+ ++ALA + M V N +T V ++ AC
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 356 VG-LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTW 414
G L+ +G+ L +V G + L+ ++++ G L +++L + + + TW
Sbjct: 476 PGDLLERGKPLHAYIV-SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITW 533
Query: 415 AALLSACKHHGNTQMAVRIADKL 437
A+L+A HHG+ + +++ K+
Sbjct: 534 NAMLAANAHHGHGEEVLKLVSKM 556
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 35/198 (17%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++LH +K G N D Y KCG + + +++ +R L SW ++SA
Sbjct: 585 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 644
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ +L G +P H F +L+ AC++ G V++G L+ Y
Sbjct: 645 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGL--VDKG--------LAYY----- 689
Query: 146 VKSTLVDMYAK-FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
DM A+ FGL A+ I +I RSGR +EA + P K
Sbjct: 690 ------DMIARDFGLEP---AIEHCI---------CVIDLLGRSGRLAEAETFISKMPMK 731
Query: 205 -NLFAWTALISGLVQSGN 221
N W +L++ GN
Sbjct: 732 PNDLVWRSLLASCKIHGN 749
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/579 (35%), Positives = 325/579 (56%), Gaps = 35/579 (6%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+HA I++S NTLL+ Y KCG L++A ++F+ +P RD V+W +++S + +
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
P AL +L G+ P+ F S++IKA A G Q+H + + ++ V
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAA--AERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
S L+D+Y ++GL D + VFD++ S N +S
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVS------------------------------ 229
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
W ALI+G + A F M ++G + +S+ GAC++ E GK VH
Sbjct: 230 -WNALIAGHARRSGTEKALELFQGMLRDGFRPSH-FSYASLFGACSSTGFLEQGKWVHAY 287
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
+I G + F N L+DMYAK + A+ IF ++++DVVSW S++ AQHG +EA
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
+ +++M ++PNE++F+ ++ ACS+ GL+ +G + M +D GI P HY ++D
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVD 406
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
L R+G L+ A I MP+ P W ALL+AC+ H NT++ A+ + L P+DP
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 448 YILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEI 507
+++L N+YA W + ++VRK M VKKEP S +++ H+F A + HP ++EI
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Query: 508 LGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRI 567
++ A++++ GYVPDTS+V+ +DQQE+E L +HSE++A+A+ LL PG+ I I
Sbjct: 527 ARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHI 586
Query: 568 VKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDG 606
KN+RVCGDCHT +KL S + REI VRD R+HHFKD
Sbjct: 587 KKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 164/341 (48%), Gaps = 37/341 (10%)
Query: 92 LSISRSLLHQGFQP-DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
L S + L + P D ++TL+K C L QG+ VHAH L S + +D V+ +TL
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLL--IQGRIVHAHILQSIFRHDIVMGNTL 101
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT 210
++MYAK G EA ++F + P ++ WT
Sbjct: 102 LNMYAK-------------------------------CGSLEEARKVFEKMPQRDFVTWT 130
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIG 270
LISG Q DA F +M + G + + LSSV+ A A G Q+HG +
Sbjct: 131 TLISGYSQHDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 271 LGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALAL 330
G++S V + +AL+D+Y + + A+ +F + ++ VSW ++I G A+ E+AL L
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFS 390
+ M+ +P+ ++ L ACS+ G + +G+ + M++ G K LLD+++
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS-GEKLVAFAGNTLLDMYA 308
Query: 391 RSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
+SG + +A + + D +W +LL+A HG + AV
Sbjct: 309 KSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAV 348
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 138/300 (46%), Gaps = 35/300 (11%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
+LH +K G + + LLD Y + GL+ DA +FD L R+ VSW ++++ +
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+AL + + +L GF+P HF +++L AC++ G L QGK VHA+ + S
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL--EQGKWVHAYMIKSGEKLVAFA 299
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
+TL+DMYAK G R +FD ++ + +SW ++++ YA
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA-------------------- 339
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
Q G G +A + F +MR+ GI + + SV+ AC++ + + G +
Sbjct: 340 -----------QHGFGKEAVWWFEEMRRVGIR-PNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS-WTSIIVGTAQHGQAE 325
L+ G + +VD+ + DL A EM + + W +++ H E
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 2/199 (1%)
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
AD ++++ C + G+ VH ++ + + + N L++MYAKC L A+ +
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 300 FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
F +M ++D V+WT++I G +QH + +AL ++ M+ PNE T +I A +
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
G L V+ G ++ + LLDL++R G +D+A+ L+ S ++ +W AL++
Sbjct: 178 CCGHQLHGFCVK-CGFDSNVHVGSALLDLYTRYGLMDDAQ-LVFDALESRNDVSWNALIA 235
Query: 420 ACKHHGNTQMAVRIADKLL 438
T+ A+ + +L
Sbjct: 236 GHARRSGTEKALELFQGML 254
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 325/570 (57%), Gaps = 36/570 (6%)
Query: 47 LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPD 106
L+ Y G +++A +LFD +P +D+VSW +++S AL + + ++ +PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 107 HFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAV 166
T++ ACA G + + G+QVH + D+G
Sbjct: 266 ESTMVTVVSACAQSGSIEL--GRQVH------------------------LWIDDHGFG- 298
Query: 167 FDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAF 226
S+L ++ A+I Y++ G A LF PYK++ +W LI G +A
Sbjct: 299 ----SNLKIVN--ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 227 YTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL--GYESCVFISNALV 284
F +M + G T D +LS ++ ACA+L ++G+ +H + G + + +L+
Sbjct: 353 LLFQEMLRSGETPNDVTMLS-ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
DMYAKC D+ AA +F + K + SW ++I G A HG+A+ + L+ M ++P+++
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
TFVGL+ ACS+ G++ GR +FR+M +DY + P L+HY C++DL SG EAE +I
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
M + PD W +LL ACK HGN ++ A+ L+ ++PE+P SY+LLSN+YA A W V
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591
Query: 465 SKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYV 524
+K R L+ K +KK PG S I++ H F G+ HP EI G++ +++ + K G+V
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651
Query: 525 PDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLI 584
PDTS VL +M+++ KE L HSE+LA+A+GL+ PGT + IVKNLRVC +CH KLI
Sbjct: 652 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLI 711
Query: 585 STIESREIYVRDAKRYHHFKDGKCSCNDFW 614
S I REI RD R+HHF+DG CSCND+W
Sbjct: 712 SKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 173/381 (45%), Gaps = 70/381 (18%)
Query: 112 TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS 171
+L+ C + L + + + + YA +++ ++ + + GLP Y +VF +I
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE-GLP-YAISVFKTIQ 95
Query: 172 SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALIS-GLVQSGNGVDAFYTFV 230
N + W M G+A S AL+L+ +IS GL+ + YTF
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLY-----------VCMISLGLLPNS------YTF- 137
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
P VL S CA ++ G+Q+HG V+ LG + +++ +L+ MY +
Sbjct: 138 -----------PFVLKS----CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQN 182
Query: 291 S---------------DLVA----------------AKYIFCEMSRKDVVSWTSIIVGTA 319
D+V+ A+ +F E+ KDVVSW ++I G A
Sbjct: 183 GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYA 242
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
+ G +EAL L+ DM+ V+P+E T V ++ AC+ G + GR + ++D+G +L
Sbjct: 243 ETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNL 301
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
+ L+DL+S+ G L+ A L +P D +W L+ H + A+ + ++L
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGGYTHMNLYKEALLLFQEML- 359
Query: 440 LKPEDPSSYILLSNVYAGASM 460
E P+ +LS + A A +
Sbjct: 360 RSGETPNDVTMLSILPACAHL 380
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/613 (34%), Positives = 342/613 (55%), Gaps = 46/613 (7%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSACNLANLPHRALSISRSLLH 100
N++L +Y K G + DA+ L D + D+V+W S+LS L A+++ + +
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
G +P S+L++A A P H+ GK +H + L + D V++TL+DMY K G
Sbjct: 219 AGLKPSTSSISSLLQAVAE--PGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 161 DYGRAVFDSISSLN-----------------------------------SISWTAMISGY 185
Y R VFD + + N +I+W ++ SGY
Sbjct: 277 PYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 186 ARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
A G+ +AL + + K N+ +WTA+ SG ++GN +A F+KM++EG+ +
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG-PN 395
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
+S+++ L++ GK+VHG + +++ ALVDMY K DL +A IF
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
+ K + SW +++G A G+ EE +A + M+ A ++P+ +TF ++ C N GLV +
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
G F M YGI P+++H +C++DL RSG+LDEA + I+TM + PD W A LS+C
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575
Query: 422 KHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG 481
K H + ++A +L L+P + ++Y+++ N+Y+ + WE+V ++R LM V+ +
Sbjct: 576 KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDL 635
Query: 482 YSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKER 541
+S I + + H+FYA +HP + +I + KL +EM+K GYVPDTS + D+ EKE+
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEK 695
Query: 542 QLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYH 601
L H+E+LA+ YGL+K IR+VKN +C D HTV K +S + +REI +++ R H
Sbjct: 696 LLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVH 755
Query: 602 HFKDGKCSCNDFW 614
HF+DGKCSCND W
Sbjct: 756 HFRDGKCSCNDSW 768
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 191/404 (47%), Gaps = 12/404 (2%)
Query: 23 FLTKKLHAQIIKSGLSQHEP-FPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA 81
FL +H +IK GL + + + YG+C L A +LFD +P RD ++W ++
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ +A+ + R + G + L++ C+N +G+Q+H + L
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFA--EGRQIHGYVLRLGLE 121
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
++ + ++L+ MY++ G + R VF+S+ N SW +++S Y + G +A+ L E
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 202 PY----KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
++ W +L+SG G DA +M+ G+ + + SS++ A A
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI-SSLLQAVAEPGH 240
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
+LGK +HG ++ V++ L+DMY K L A+ +F M K++V+W S++ G
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 318 TAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
+ ++A AL M +KP+ +T+ L + +G K + M E G+ P
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAP 359
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALL 418
++ +T + S++G+ A + M V P+ T + LL
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 124/243 (51%), Gaps = 2/243 (0%)
Query: 153 MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTAL 212
MY GL +G + + + ++ +A + Y R A +LF E P ++ AW +
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
+ ++SGN A F +M+ G D ++ ++ C+N + G+Q+HG V+ LG
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVK-LLQVCSNKEGFAEGRQIHGYVLRLG 119
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
ES V + N+L+ MY++ L ++ +F M +++ SW SI+ + G ++A+ L D
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
+M +KP+ VT+ L+ ++ GL A+ + M + G+KPS + LL +
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEP 238
Query: 393 GHL 395
GHL
Sbjct: 239 GHL 241
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H ++ L L+D YGK G LQ A+++F + ++ L SW +L +
Sbjct: 416 KEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
++ +L G +PD F++++ C N G V +G + + + S Y
Sbjct: 476 GRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGL--VQEGWK-YFDLMRSRYGIIPT 532
Query: 146 VK--STLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMIS 183
++ S +VD+ + G D ++S ++ W A +S
Sbjct: 533 IEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLS 573
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/623 (34%), Positives = 334/623 (53%), Gaps = 54/623 (8%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L+ Y K ++ +A +F+ +P R++VSW +++ + A S+ + +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 105 PDHFVFSTLIK--------------------ACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+F LI A NM +G+ A + +
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 145 VVK-STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
VV +T++ Y + D R +F+ + +SWT+M+ GY SGR +A F P
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 204 KNLFA-------------------------------WTALISGLVQSGNGVDAFYTFVKM 232
K + A W +I + G ++A F +M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 233 RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSD 292
+++G+ + P ++S ++ CA LA + G+QVH ++ ++ V++++ L+ MY KC +
Sbjct: 323 QKQGVRPSFPSLIS-ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGE 381
Query: 293 LVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA 352
LV AK +F S KD++ W SII G A HG EEAL ++ +M S+ PN+VT + ++ A
Sbjct: 382 LVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEP 412
CS G + +G +F SM + + P+++HY+C +D+ R+G +D+A LI +M + PD
Sbjct: 442 CSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 413 TWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMM 472
W ALL ACK H +A A KL +P++ +Y+LLS++ A S W +V+ VRK M
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMR 561
Query: 473 VKEVKKEPGYSCIDLGKESHVFY-AGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVL 531
V K PG S I++GK+ H+F G +HP + IL ++ K D +R+ GY PD S+VL
Sbjct: 562 TNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVL 621
Query: 532 HDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESRE 591
HD+D++EK L HSERLAVAYGLLK G IR++KNLRVCGDCH +KLIS + RE
Sbjct: 622 HDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTERE 681
Query: 592 IYVRDAKRYHHFKDGKCSCNDFW 614
I +RDA R+HHF +G+CSC D+W
Sbjct: 682 IILRDANRFHHFNNGECSCRDYW 704
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 176/414 (42%), Gaps = 71/414 (17%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLS----------ACNLANL-PHRALS 93
N+++ Y GL ++A QLFD + R++VSW ++S A N+ L P R +
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV- 110
Query: 94 ISRSLLHQGFQPDHFVFS-----------TLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+S + + +G+ + V + G L ++ G+ A L
Sbjct: 111 VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGL-IDDGRIDKARKLYDMMPV 169
Query: 143 DDVVKST-LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
DVV ST ++ + G D R +FD + N ++WT MI+GY ++ R A +LF
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 202 PYKNLFAWTALISGLVQSGNGVDA--FYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
P K +WT+++ G SG DA F+ + M+ P++ AC
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK--------PVI------AC------- 268
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
NA++ + + ++ A+ +F M +D +W +I
Sbjct: 269 ---------------------NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
+ G EAL L+ M V+P+ + + ++ C+ + + GR + +V +
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQFDDDV 366
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+ L+ ++ + G L +A+ L+ S D W +++S HG + A++I
Sbjct: 367 YVASVLMTMYVKCGELVKAK-LVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 193/478 (40%), Gaps = 79/478 (16%)
Query: 53 KCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFST 112
+ G + +A + FD+L + + SW S++S LP A R L +
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA----RQLFDE----------- 73
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
+++ V + L+S Y + ++ R VF+ +
Sbjct: 74 ------------MSERNVVSWNGLVSGYIKNRMIVE--------------ARNVFELMPE 107
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKM 232
N +SWTAM+ GY + G EA LF P +N +WT + GL+ G +D M
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGR-IDKARKLYDM 166
Query: 233 RQEGITIADPLVLSSVVGA-CANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
+ + D + ++++G C V E L+ E V ++ Y + +
Sbjct: 167 ----MPVKDVVASTNMIGGLCREGRVDE-----ARLIFDEMRERNVVTWTTMITGYRQNN 217
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
+ A+ +F M K VSWTS+++G G+ E+A ++ M V VG
Sbjct: 218 RVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF-- 275
Query: 352 ACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VS 408
VG +SK R +F ++ED + ++ + R G EA +L M V
Sbjct: 276 --GEVGEISKARRVF-DLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVR 468
P P+ ++LS C + Q ++ L+ + +D +VY + + K
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD--------DVYVASVLMTMYVKCG 380
Query: 469 KLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPD 526
+L+ K V +S D+ + + +G SH + +E L K+ EM G +P+
Sbjct: 381 ELVKAKLVFDR--FSSKDIIMWNSII-SGYASHGLGEEAL----KIFHEMPSSGTMPN 431
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 155 AKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALIS 214
++ G + R FDS+ SW +++SGY +G EA +LF E +N+ +W L+S
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLV----LSSVVGACANLAVWELGK--QVHGLV 268
G +++ V+A F M + + +V +VG +L W + + +V V
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESL-FWRMPERNEVSWTV 146
Query: 269 IGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEAL 328
+ G I + +D K D+ M KDVV+ T++I G + G+ +EA
Sbjct: 147 MFGG-----LIDDGRIDKARKLYDM---------MPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 329 ALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDL 388
++D+M + N VT+ +I V R LF M E + +T +L
Sbjct: 193 LIFDEM----RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WTSMLLG 243
Query: 389 FSRSGHLDEAENLIRTMPVSP 409
++ SG +++AE MP+ P
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKP 264
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 10/184 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++HA +++ + L+ Y KCG L A +FD +D++ W S++S
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH--VNQGKQVHAHFLLSPYAND 143
L AL I + G P+ ++ AC+ G L + + + + F ++P
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMISGYARSGR----RSEALRLF 198
S VDM + G D + +S++ ++ W A++ R A +LF
Sbjct: 471 ---YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 199 RESP 202
P
Sbjct: 528 ENEP 531
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 332/617 (53%), Gaps = 39/617 (6%)
Query: 3 LSRHAYALKSQLSSVARQS---PFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
L++ K LS + R S P KK+HA ++++G S+ LL+ G +
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCY 61
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
A Q+FD + + W ++ LP +L + + + G +PD F + ++KA +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
+G G +HAH + + +V + LV MY KFG
Sbjct: 122 LGDFSC--GFALHAHVVKYGFGCLGIVATELVMMYMKFG--------------------- 158
Query: 180 AMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
S A LF K+L AW A ++ VQ+GN A F KM + +
Sbjct: 159 ----------ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF 208
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
D + S++ AC L E+G++++ + + + NA +DM+ KC + AA+ +
Sbjct: 209 -DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 300 FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
F EM +++VVSW+++IVG A +G + EAL L+ M + ++PN VTF+G++ ACS+ GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 360 SKGRALFRSMVE--DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAAL 417
++G+ F MV+ D ++P +HY C++DL RSG L+EA I+ MPV PD W AL
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 418 LSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVK 477
L AC H + + ++AD L+ P+ S ++LLSN+YA A W+ V KVR M K
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 478 KEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQ 537
K YS ++ + H F G+ SHP I + ++ ++RK GYVPDT V HD++ +
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME 507
Query: 538 EKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDA 597
EKE L HSE+LA+A+GL+K PG IR++KNLR C DCH K +S++ S EI +RD
Sbjct: 508 EKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDK 567
Query: 598 KRYHHFKDGKCSCNDFW 614
R+HHF++G CSC +FW
Sbjct: 568 NRFHHFRNGVCSCKEFW 584
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/631 (32%), Positives = 335/631 (53%), Gaps = 45/631 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ +H++II L + L+ AY + A ++FD +P R+++ ++ +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ + ++ +PDH+ F ++KAC+ G + + G+++H ++
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVI--GRKIHGSATKVGLSSTLF 176
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP--- 202
V + LV MY K G R V D +S + +SW +++ GYA++ R +AL + RE
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 203 ----------------------------------YKNLFAWTALISGLVQSGNGVDAFYT 228
K+L +W +I +++ V+A
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA 288
+ +M +G D + ++SV+ AC + + LGK++HG + + + NAL+DMYA
Sbjct: 297 YSRMEADGFE-PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
KC L A+ +F M +DVVSWT++I G+ +A+AL+ + + + P+ + FV
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
+ ACS+ GL+ +GR+ F+ M + Y I P L+H C++DL R+G + EA I+ M +
Sbjct: 416 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME 475
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVR 468
P+E W ALL AC+ H +T + + ADKL L PE Y+LLSN+YA A WE V+ +R
Sbjct: 476 PNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIR 535
Query: 469 KLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTS 528
+M K +KK PG S +++ + H F G+ SHP DEI + L +M++ GYVPD+
Sbjct: 536 NIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSE 595
Query: 529 YVLHDMDQQEKERQLFWHSERLAVAYGLLKAVP-----GTIIRIVKNLRVCGDCHTVLKL 583
LHD+++++KE L HSE+LA+ + L+ IRI KNLR+CGDCH KL
Sbjct: 596 SALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKL 655
Query: 584 ISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IS I SREI +RD R+H F+ G CSC D+W
Sbjct: 656 ISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L KK+H I + L + N L+D Y KCG L+ A +F+ + RD+VSW +++SA
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG--KQVHAHFLLSPYA 141
+ A+++ L G PD F T + AC++ G L + K + H+ ++P
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 142 NDDVVKSTLVDMYAKFG-LPDYGRAVFDSISSLNSISWTAMI 182
+ +VD+ + G + + R + D N W A++
Sbjct: 447 EH---LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/627 (33%), Positives = 351/627 (55%), Gaps = 45/627 (7%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGL-LQDAL----QLFDTLPHRDLVSWASVLSA 81
++H IK G+ F L+ C + + DAL +L P D + +++
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLIL---HCAISISDALPYARRLLLCFPEPDAFMFNTLVRG 79
Query: 82 CNLANLPHRALSISRSLLHQGFQ-PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY 140
+ ++ PH ++++ ++ +GF PD F F+ +IKA N L G Q+H L
Sbjct: 80 YSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT--GFQMHCQALKHGL 137
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTA-------------------- 180
+ V +TL+ MY G ++ R VFD + N ++W A
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 181 -----------MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
M++GY ++G A R+F E P+++ +W+ +I G+ +G+ ++F F
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
++++ G++ + + L+ V+ AC+ +E GK +HG V GY V ++NAL+DMY++
Sbjct: 258 RELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 290 CSDLVAAKYIFCEMSRKD-VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
C ++ A+ +F M K +VSWTS+I G A HGQ EEA+ L+++M + V P+ ++F+
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
L++ACS+ GL+ +G F M Y I+P ++HY C++DL+ RSG L +A + I MP+
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVR 468
P W LL AC HGN ++A ++ +L L P + +LLSN YA A W++V+ +R
Sbjct: 437 PTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIR 496
Query: 469 KLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMR-KRGYVPDT 527
K M+V+ +KK +S +++GK + F AGE + E ++++ ++ + GY P+
Sbjct: 497 KSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEV 556
Query: 528 SYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTI 587
+ L+D++++EKE Q+ HSE+LA+A+ L + G IRIVKNLR+C DCH V+KL S +
Sbjct: 557 ASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKV 616
Query: 588 ESREIYVRDAKRYHHFKDGKCSCNDFW 614
EI VRD R+H FKDG CSC D+W
Sbjct: 617 YGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 3 LSRHAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDAL 61
+S + +L LS+ ++ F K LH + K+G S N L+D Y +CG + A
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMAR 324
Query: 62 QLFDTLPH-RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
+F+ + R +VSW S+++ + A+ + + G PD F +L+ AC++
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHA 384
Query: 121 GPLHVNQGKQVHAHFLLSPYANDDVVK-STLVDMYAKFG 158
G + +G+ + + ++ +VD+Y + G
Sbjct: 385 GL--IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 327/590 (55%), Gaps = 36/590 (6%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K H +II+ L N L++AY KCG ++ A Q+FD + R LVSW +++
Sbjct: 81 KACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACA-NMGPLHVNQGKQVHAHFLLSPYANDD 144
+ AL I + ++GF+ F S+++ AC N L + K++H
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL---ECKKLHC----------- 186
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
+ T +D+ G TA++ YA+ G +A+++F K
Sbjct: 187 LSVKTCIDLNLYVG--------------------TALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
+ W+++++G VQ+ N +A + + ++ + + LSSV+ AC+NLA GKQ+
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE-QNQFTLSSVICACSNLAALIEGKQM 285
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H ++ G+ S VF++++ VDMYAKC L + IF E+ K++ W +II G A+H +
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
+E + L++ M + PNEVTF L+ C + GLV +GR F+ M YG+ P++ HY+C
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
++D+ R+G L EA LI+++P P W +LL++C+ + N ++A A+KL L+PE+
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPEN 465
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMK 504
+++LLSN+YA WE ++K RKL+ +VKK G S ID+ + H F GE+ HP
Sbjct: 466 AGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRI 525
Query: 505 DEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTI 564
EI + L + RK GY P + LHD++ +KE L HSE+LA+ +GL+ +
Sbjct: 526 REICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSP 585
Query: 565 IRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+RI+KNLR+C DCH +K S R I VRD R+HHF DG CSC DFW
Sbjct: 586 VRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 248 VVGACA-NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
++ CA N AV E K HG +I + E V + N L++ Y+KC + A+ +F M +
Sbjct: 67 ILQLCARNGAVME-AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
+VSW ++I ++ EAL ++ +M + K +E T ++ AC V +
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG-VNCDALECKKL 184
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
+ I +L T LLDL+++ G + +A + +M TW+++++ + N
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKN 243
Query: 427 TQMAV 431
+ A+
Sbjct: 244 YEEAL 248
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 316/559 (56%), Gaps = 41/559 (7%)
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
A LF+ + D+V + S+ + P S+ +L G PD++ F +L+KACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
L +G+Q+H + ++ V TL++MY + D R VFD I + +
Sbjct: 142 AKALE--EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYN 199
Query: 180 AMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
AMI+GYAR R +EAL LFRE K L
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYL--------------------------------K 227
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
+ + L SV+ +CA L +LGK +H + V ++ AL+DM+AKC L A I
Sbjct: 228 PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSI 287
Query: 300 FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
F +M KD +W+++IV A HG+AE+++ +++ M S V+P+E+TF+GL+ ACS+ G V
Sbjct: 288 FEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRV 347
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
+GR F MV +GI PS++HY ++DL SR+G+L++A I +P+SP W LL+
Sbjct: 348 EEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLA 407
Query: 420 ACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE 479
AC H N +A ++++++ L Y++LSN+YA WE V +RK+M ++ K
Sbjct: 408 ACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV 467
Query: 480 PGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDA---EMRKRGYVPDTSYVLH-DMD 535
PG S I++ H F++G+ +K L R LD E++ GYVPDTS V+H +M+
Sbjct: 468 PGCSSIEVNNVVHEFFSGDG---VKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 536 QQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVR 595
QEKE L +HSE+LA+ +GLL PGT IR+VKNLRVC DCH KLIS I R++ +R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 596 DAKRYHHFKDGKCSCNDFW 614
D +R+HHF+DGKCSC DFW
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++LH +K GL + TL++ Y +C + A +FD + +V + ++++
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
N P+ ALS+ R + + +P+ +++ +CA +G L + GK +H + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL--GKWIHKYAKKHSFCKYVK 266
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V + L+DM+AK G D ++F+ + ++ +W+AMI YA G+ +++ +F +N
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 206 L 206
+
Sbjct: 327 V 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 3 LSRHAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDAL 61
L + L S LSS A L K +H K ++ L+D + KCG L DA+
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 62 QLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
+F+ + ++D +W++++ A +++ + + + QPD F L+ AC++ G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 122 PLHVNQGKQVHAHFLLSPYANDDVVK--STLVDMYAKFG 158
V +G++ + ++S + +K ++VD+ ++ G
Sbjct: 346 --RVEEGRKYFSQ-MVSKFGIVPSIKHYGSMVDLLSRAG 381
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 335/613 (54%), Gaps = 63/613 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD-------ALQLFDTLPHRDLVSWASV 78
K+LHA +++ + P TL YGK L A ++FD++ + W ++
Sbjct: 65 KQLHAFTLRTTYPEE---PATLF-LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTL 120
Query: 79 LSAC-NLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL 136
+ AC + + A + R +L +G PD F ++KACA + ++GKQVH +
Sbjct: 121 IRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI--FGFSEGKQVHCQIV 178
Query: 137 LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR 196
+ D V + L+ +Y G D R VFD
Sbjct: 179 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD---------------------------- 210
Query: 197 LFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA 256
E P ++L +W ++I LV+ G A F +M++ D + SV+ ACA L
Sbjct: 211 ---EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLG 265
Query: 257 VWELGKQVHGLVI---GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
LG H ++ + V + N+L++MY KC L A+ +F M ++D+ SW +
Sbjct: 266 SLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNA 325
Query: 314 IIVGTAQHGQAEEALALYDDMVSAR--VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
+I+G A HG+AEEA+ +D MV R V+PN VTFVGL+ AC++ G V+KGR F MV
Sbjct: 326 MILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR 385
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC-KHHGNTQMA 430
DY I+P+L+HY C++DL +R+G++ EA +++ +MP+ PD W +LL AC K + +++
Sbjct: 386 DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELS 445
Query: 431 VRIADKLLCLKPEDPSS-------YILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS 483
IA ++ K ++ SS Y+LLS VYA AS W +V VRKLM ++KEPG S
Sbjct: 446 EEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505
Query: 484 CIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSY--VLHDMDQQEKER 541
I++ SH F+AG+TSHP +I ++ +D +R GY+PD S ++ + KE
Sbjct: 506 SIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEY 565
Query: 542 QLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYH 601
L HSERLA+A+GL+ P T IRI KNLRVC DCH V KLIS + + EI VRD R+H
Sbjct: 566 SLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFH 625
Query: 602 HFKDGKCSCNDFW 614
HFKDG CSC D+W
Sbjct: 626 HFKDGSCSCLDYW 638
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/592 (35%), Positives = 331/592 (55%), Gaps = 26/592 (4%)
Query: 26 KKLHAQIIKSG-LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
K+LHA +K+G L ++ + L+D Y C + ++FD + R + W ++++ +
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 85 ANLPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
AL + + G + + ++ AC G ++ + +H + D
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF--SRKEAIHGFVVKRGLDRD 439
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V++TL+DMY++ G D +F + + ++W MI+GY S +AL L +
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK--M 497
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+NL V + V ++ IT L +++ +CA L+ GK+
Sbjct: 498 QNL-------------ERKVSKGASRVSLKPNSIT------LMTILPSCAALSALAKGKE 538
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H I + V + +ALVDMYAKC L ++ +F ++ +K+V++W II+ HG
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+EA+ L M+ VKPNEVTF+ + ACS+ G+V +G +F M DYG++PS HY
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEP-TWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C++DL R+G + EA L+ MP ++ W++LL A + H N ++ A L+ L+P
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
S Y+LL+N+Y+ A +W+ ++VR+ M + V+KEPG S I+ G E H F AG++SHP
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 778
Query: 503 MKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 562
+++ G + L MRK GYVPDTS VLH++++ EKE L HSE+LA+A+G+L PG
Sbjct: 779 QSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPG 838
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
TIIR+ KNLRVC DCH K IS I REI +RD +R+H FK+G CSC D+W
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 195/425 (45%), Gaps = 43/425 (10%)
Query: 8 YALKSQLSSVAR-QSPFLTKKLHAQIIKSGLSQHE-PFPNTLLDAYGKCGLLQDALQLFD 65
YA + L +VA Q L K++HA + K G NTL++ Y KCG ++FD
Sbjct: 98 YAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD 157
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG-PLH 124
+ R+ VSW S++S+ AL R +L + +P F +++ AC+N+ P
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
+ GKQVHA+ L N ++ +TLV MY K G + + S + ++W ++S
Sbjct: 218 LMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
++ + EAL RE M EG+ D
Sbjct: 277 LCQNEQLLEALEYLRE-------------------------------MVLEGVE-PDEFT 304
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLG-YESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
+SSV+ AC++L + GK++H + G + F+ +ALVDMY C +++ + +F M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 304 SRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNVGLVSKG 362
+ + W ++I G +Q+ +EAL L+ M SA + N T G++ AC G S+
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA-- 420
A+ V G+ L+D++SR G +D A + M D TW +++
Sbjct: 425 EAI-HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYV 482
Query: 421 -CKHH 424
+HH
Sbjct: 483 FSEHH 487
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 138/297 (46%), Gaps = 43/297 (14%)
Query: 75 WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH 134
W +L + +NL A+ ++ G +PD++ F L+KA A++ + + GKQ+HAH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL--GKQIHAH 122
Query: 135 FLLSPYANDDV-VKSTLVDMYAKFGLPDYGRA--VFDSISSLNSISWTAMISGYARSGRR 191
Y D V V +TLV++Y K G D+G VFD IS N +S
Sbjct: 123 VYKFGYGVDSVTVANTLVNLYRKCG--DFGAVYKVFDRISERNQVS-------------- 166
Query: 192 SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA 251
W +LIS L A F M E + L SVV A
Sbjct: 167 -----------------WNSLISSLCSFEKWEMALEAFRCMLDENVE-PSSFTLVSVVTA 208
Query: 252 CANLAVWE---LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV 308
C+NL + E +GKQVH + G E FI N LV MY K L ++K + +D+
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
V+W +++ Q+ Q EAL +MV V+P+E T ++ ACS++ ++ G+ L
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 209 WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLV 268
W L+ V+S +A T+V M GI D +++ A A+L ELGKQ+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIK-PDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 269 IGLGYE-SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
GY V ++N LV++Y KC D A +F +S ++ VSW S+I + E A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGL--------------VSKGRA---LFRSMV 370
L + M+ V+P+ T V ++ ACSN+ + + KG + ++V
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLV 243
Query: 371 EDYGIKPSLQHYTCLLDLFS---------------RSGHLDEAENLIRTM---PVSPDEP 412
YG L LL F ++ L EA +R M V PDE
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 413 TWAALLSACKH 423
T +++L AC H
Sbjct: 304 TISSVLPACSH 314
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 1 MSLSRHAYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
+SL ++ L + L S A S K++HA IK+ L+ + L+D Y KCG LQ
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
+ ++FD +P +++++W ++ A + A+ + R ++ QG +P+ F ++ AC++
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
G V++G ++ V+K PDYG +S +
Sbjct: 631 SG--MVDEGLRIFY-----------VMK------------PDYG-------VEPSSDHYA 658
Query: 180 AMISGYARSGRRSEALRLFRESP--YKNLFAWTALI 213
++ R+GR EA +L P + AW++L+
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/610 (33%), Positives = 330/610 (54%), Gaps = 35/610 (5%)
Query: 6 HAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
H + L + R S L LH+ ++K G + +LL Y G L DA +LF
Sbjct: 110 HGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLF 169
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
D +P R +V+W ++ S + A+ + + ++ G +PD + ++ AC ++G L
Sbjct: 170 DEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDL- 228
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
+ G+ + + + V++TLV++Y
Sbjct: 229 -DSGEWIVKYMEEMEMQKNSFVRTTLVNLY------------------------------ 257
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
A+ G+ +A +F K++ W+ +I G + + F++M QE + D
Sbjct: 258 -AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK-PDQFS 315
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS 304
+ + +CA+L +LG+ L+ + + +F++NAL+DMYAKC + +F EM
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
KD+V + I G A++G + + A++ + P+ TF+GL+ C + GL+ G
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435
Query: 365 LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHH 424
F ++ Y +K +++HY C++DL+ R+G LD+A LI MP+ P+ W ALLS C+
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLV 495
Query: 425 GNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSC 484
+TQ+A + +L+ L+P + +Y+ LSN+Y+ W+ ++VR +M K +KK PGYS
Sbjct: 496 KDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSW 555
Query: 485 IDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLF 544
I+L + H F A + SHP+ D+I + L EMR G+VP T +V D++++EKER L
Sbjct: 556 IELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLG 615
Query: 545 WHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFK 604
+HSE+LAVA GL+ G +IR+VKNLRVCGDCH V+KLIS I REI VRD R+H F
Sbjct: 616 YHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFT 675
Query: 605 DGKCSCNDFW 614
+G CSCND+W
Sbjct: 676 NGSCSCNDYW 685
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 11/262 (4%)
Query: 197 LFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD---PLVLSSVVGACA 253
LF + + N+F + +LI+G V + + F+ +R+ G+ + PLVL AC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLK----ACT 122
Query: 254 NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
+ +LG +H LV+ G+ V +L+ +Y+ L A +F E+ + VV+WT+
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDY 373
+ G G+ EA+ L+ MV VKP+ V ++ AC +VG + G + + M E
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 374 GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
K S T L++L+++ G +++A ++ +M V D TW+ ++ + + + +
Sbjct: 243 MQKNSFVR-TTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 434 ADKLL--CLKPEDPSSYILLSN 453
++L LKP+ S LS+
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSS 322
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 321/579 (55%), Gaps = 33/579 (5%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
LH ++ SGL ++ N L+ YGK G + ++ ++ +P RD+V+W +++
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
P +AL+ +++ +G ++ +++ AC G L + +GK +HA+ + + + +D+ VK
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVK 485
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
++L+ MYAK G + +F+ + + N I+W AM++ A G E L+L
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS-------- 537
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
KMR G+++ D S + A A LAV E G+Q+HGL
Sbjct: 538 -----------------------KMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGL 573
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
+ LG+E FI NA DMY+KC ++ + + + SW +I +HG EE
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 633
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
A + +M+ +KP VTFV L+ ACS+ GLV KG A + + D+G++P+++H C++D
Sbjct: 634 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 693
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
L RSG L EAE I MP+ P++ W +LL++CK HGN + A+ L L+PED S
Sbjct: 694 LLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 753
Query: 448 YILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEI 507
Y+L SN++A WE+V VRK M K +KK+ S + L + F G+ +HP EI
Sbjct: 754 YVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 813
Query: 508 LGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRI 567
+ + +++ GYV DTS L D D+++KE L+ HSERLA+AY L+ G+ +RI
Sbjct: 814 YAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRI 873
Query: 568 VKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDG 606
KNLR+C DCH+V K +S + R I +RD R+HHF+ G
Sbjct: 874 FKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 220/503 (43%), Gaps = 76/503 (15%)
Query: 7 AYALKSQLSSVARQSPFLTK--KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
++ + S +++ R + ++H + KSGL +L YG GL+ + ++F
Sbjct: 41 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 100
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ +P R++VSW S++ + P + I + + +G + S +I +C +
Sbjct: 101 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 160
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
+ G+Q+ + S + V+++L+ M G DY +FD +S ++ISW ++ +
Sbjct: 161 L--GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 218
Query: 185 YARSGRRSEALRLF----------RESPYKNLFA---------WTALISGLV-------- 217
YA++G E+ R+F + L + W I GLV
Sbjct: 219 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 278
Query: 218 ------------QSGNGVDAFYTFVKMRQEGITIADPLVLSSV----------------- 248
+G V+A F +M + + + L+ S V
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 338
Query: 249 -------------VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
+ AC +E G+ +HGLV+ G I NALV MY K ++
Sbjct: 339 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Query: 296 AKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSN 355
++ + +M R+DVV+W ++I G A+ ++ALA + M V N +T V ++ AC
Sbjct: 399 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 458
Query: 356 VG-LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTW 414
G L+ +G+ L +V G + L+ ++++ G L +++L + + + TW
Sbjct: 459 PGDLLERGKPLHAYIV-SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITW 516
Query: 415 AALLSACKHHGNTQMAVRIADKL 437
A+L+A HHG+ + +++ K+
Sbjct: 517 NAMLAANAHHGHGEEVLKLVSKM 539
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 168/373 (45%), Gaps = 39/373 (10%)
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
+P R+ VSW +++S L + R + G +P FV ++L+ AC G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM-FR 59
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
+G QVH S +D V + ++ +Y +GL R VF+ + N +SWT+++ GY+
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
G E + +++ MR EG+ + +S
Sbjct: 120 DKGEPEEVIDIYK-------------------------------GMRGEGVGCNEN-SMS 147
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
V+ +C L LG+Q+ G V+ G ES + + N+L+ M ++ A YIF +MS +
Sbjct: 148 LVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER 207
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
D +SW SI AQ+G EE+ ++ M + N T L+ +V GR +
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI- 266
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
+V G + LL +++ +G EA + + MP + D +W +L+++ + G
Sbjct: 267 HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDGR 325
Query: 427 TQMAVRIADKLLC 439
+ A+ LLC
Sbjct: 326 SLDAL----GLLC 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 35/198 (17%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++LH +K G N D Y KCG + + +++ +R L SW ++SA
Sbjct: 568 QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRH 627
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ +L G +P H F +L+ AC++ G V++G L+ Y
Sbjct: 628 GYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGL--VDKG--------LAYY----- 672
Query: 146 VKSTLVDMYAK-FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
DM A+ FGL A+ I +I RSGR +EA + P K
Sbjct: 673 ------DMIARDFGLEP---AIEHCI---------CVIDLLGRSGRLAEAETFISKMPMK 714
Query: 205 -NLFAWTALISGLVQSGN 221
N W +L++ GN
Sbjct: 715 PNDLVWRSLLASCKIHGN 732
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/627 (35%), Positives = 350/627 (55%), Gaps = 50/627 (7%)
Query: 2 SLSRH-----AYALKSQLSSVAR-QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCG 55
S+ RH ++ L S LSS A + L +++H + +K G+ + N L+ Y + G
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 56 LLQDALQLFDTLPHRDLVSWASVLSACNLA--NLPHRALS-ISRSLLHQGFQPDHFVFST 112
L + ++F ++P D VSW S++ A + +LP + ++ Q F
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
+ + G L GKQ+H L + A++ ++ L+ Y K G D +F ++
Sbjct: 525 SAVSSLSFGEL----GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAE 580
Query: 173 L-NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVK 231
++++W +MISGY + ++AL L W ++Q+G +D+F
Sbjct: 581 RRDNVTWNSMISGYIHNELLAKALDL----------VWF-----MLQTGQRLDSF----- 620
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
+ ++V+ A A++A E G +VH + ES V + +ALVDMY+KC
Sbjct: 621 ------------MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLI 350
L A F M ++ SW S+I G A+HGQ EEAL L++ M + + P+ VTFVG++
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 351 YACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD 410
ACS+ GL+ +G F SM + YG+ P ++H++C+ D+ R+G LD+ E+ I MP+ P+
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788
Query: 411 EPTWAALLSAC-KHHG-NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVR 468
W +L AC + +G ++ + A+ L L+PE+ +Y+LL N+YA WE++ K R
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 469 KLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTS 528
K M +VKKE GYS + + H+F AG+ SHP D I +++L+ +MR GYVP T
Sbjct: 849 KKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTG 908
Query: 529 YVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTI-IRIVKNLRVCGDCHTVLKLISTI 587
+ L+D++Q+ KE L +HSE+LAVA+ L T+ IRI+KNLRVCGDCH+ K IS I
Sbjct: 909 FALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKI 968
Query: 588 ESREIYVRDAKRYHHFKDGKCSCNDFW 614
E R+I +RD+ R+HHF+DG CSC+DFW
Sbjct: 969 EGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 204/470 (43%), Gaps = 79/470 (16%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
H+++ K+ L + N L++AY + G A ++FD +P R+ VSWA ++S +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
AL R ++ +G + + F ++++AC +G + + G+Q+H YA D VV
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 148 STLVDMYAK-FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY--- 203
+ L+ MY K G Y F I NS+SW ++IS Y+++G + A R+F Y
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 204 --------------------------------------KNLFAWTALISGLVQSGNGVDA 225
+LF + L+S +SG+ A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 226 FYTFVKMRQEGITIADPLVLS--------------------------SVVGACANLAVWE 259
F +M + L++ S V ++ +
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 260 LGKQV--------HGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
L ++V HG VI G + V I N LV+MYAKC + A+ +F M+ KD VS
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
W S+I G Q+G EA+ Y M + P T + + +C+++ G+ + +
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 371 EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
+ GI ++ L+ L++ +G+L+E + +MP D+ +W +++ A
Sbjct: 443 K-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 39/406 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +++ I KSGL + L+ A+ K G L A ++F+ + R+ V+ ++
Sbjct: 226 LLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 84 LANLPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANMG---PLHVNQGKQVHAHFLLSP 139
A + + P+ +V L+ + + + +G++VH H
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGH----- 338
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
V+ + LVD G +++ YA+ G ++A R+F
Sbjct: 339 -----VITTGLVDFMVGIG--------------------NGLVNMYAKCGSIADARRVFY 373
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
K+ +W ++I+GL Q+G ++A + MR+ I + L S + +CA+L +
Sbjct: 374 FMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI-LPGSFTLISSLSSCASLKWAK 432
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
LG+Q+HG + LG + V +SNAL+ +YA+ L + IF M D VSW SII A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 320 QHGQA-EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
+ ++ EA+ + + A K N +TF ++ A S++ G+ + +++ I
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADE 551
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHH 424
L+ + + G +D E + M D TW +++S H+
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 150/361 (41%), Gaps = 49/361 (13%)
Query: 112 TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS 171
+ +++C H + H+ + D + + L++ Y + G R VFD +
Sbjct: 8 SFVQSCVG----HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 172 SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVK 231
N +SW ++SGY+R+G EAL R+
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRD------------------------------- 92
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWEL--GKQVHGLVIGLGYESCVFISNALVDMYAK 289
M +EGI ++ SV+ AC + + G+Q+HGL+ L Y +SN L+ MY K
Sbjct: 93 MVKEGI-FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 290 CSDLVA-AKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
C V A F ++ K+ VSW SII +Q G A ++ M +P E TF
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 349 LI-YACS----NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
L+ ACS +V L+ + ++ G+ L + L+ F++SG L A +
Sbjct: 212 LVTTACSLTEPDVRLLEQ----IMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFN 267
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWEN 463
M + + T L+ + A ++ + + P SY++L + + S+ E
Sbjct: 268 QME-TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEE 326
Query: 464 V 464
V
Sbjct: 327 V 327
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 331/591 (56%), Gaps = 36/591 (6%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++HA +IK+ LL YGKC L+DA ++ D +P +++VSW +++S +
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
AL++ ++ +P+ F F+T++ +C L + GKQ+H + Y +
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL--GKQIHGLIVKWNYDSHIF 189
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V S+L+DMYAK +G+ EA +F P ++
Sbjct: 190 VGSSLLDMYAK-------------------------------AGQIKEAREIFECLPERD 218
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ + TA+I+G Q G +A F ++ EG++ + + +S++ A + LA+ + GKQ H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS-PNYVTYASLLTALSGLALLDHGKQAH 277
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
V+ + N+L+DMY+KC +L A+ +F M + +SW +++VG ++HG
Sbjct: 278 CHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGR 337
Query: 326 EALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYT 383
E L L+ M RVKP+ VT + ++ CS+ + G +F MV +YG KP +HY
Sbjct: 338 EVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYG 397
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++D+ R+G +DEA I+ MP P +LL AC+ H + + + +L+ ++PE
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE 457
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
+ +Y++LSN+YA A W +V+ VR +MM K V KEPG S I + H F+A + +HP
Sbjct: 458 NAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPR 517
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 563
++E+L M+++ +M++ GYVPD S VL+D+D+++KE+ L HSE+LA+ +GL+ G
Sbjct: 518 REEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGI 577
Query: 564 IIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IR+ KNLR+C DCH K+ S + RE+ +RD R+H DG CSC D+W
Sbjct: 578 PIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 184/386 (47%), Gaps = 51/386 (13%)
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS 169
+ L+ AC + L G++VHAH + + Y +++ L+ Y K + R V D
Sbjct: 55 YDALLNACLDKRAL--RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 170 ISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
+ N +SWTAMIS Y+++G SEAL +F E
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAE----------------------------- 143
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
MR +G + ++V+ +C + LGKQ+HGL++ Y+S +F+ ++L+DMYAK
Sbjct: 144 -MMRSDG--KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200
Query: 290 CSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
+ A+ IF + +DVVS T+II G AQ G EEAL ++ + S + PN VT+ L
Sbjct: 201 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASL 260
Query: 350 IYACSNVGLVSKGRA----LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
+ A S + L+ G+ + R + Y + LQ+ L+D++S+ G+L A L M
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAV---LQN--SLIDMYSKCGNLSYARRLFDNM 315
Query: 406 PVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGAS---MWE 462
P +W A+L HG + + + + K P + LL+ V +G S M +
Sbjct: 316 P-ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA-VLSGCSHGRMED 373
Query: 463 NVSKVRKLMMVKEVKKEPG---YSCI 485
+ M+ E +PG Y CI
Sbjct: 374 TGLNIFDGMVAGEYGTKPGTEHYGCI 399
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 3/193 (1%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
+ + L+S R S L K++H I+K H ++LLD Y K G +++A ++F+
Sbjct: 154 FTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFEC 213
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
LP RD+VS ++++ L AL + L +G P++ +++L+ A + + L +
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL--D 271
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
GKQ H H L V++++L+DMY+K G Y R +FD++ +ISW AM+ GY+
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 187 RSGRRSEALRLFR 199
+ G E L LFR
Sbjct: 332 KHGLGREVLELFR 344
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 196 RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQE-GITIADPLVLSSVVGACAN 254
R F SP + IS L +G +A + E G D L+ AC +
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALL-----NACLD 64
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
G++VH +I Y ++ L+ Y KC L A+ + EM K+VVSWT++
Sbjct: 65 KRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAM 124
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
I +Q G + EAL ++ +M+ + KPNE TF ++ +C + G+ + ++ +
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWN 183
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
+ + LLD+++++G + EA + +P D + A+++ G + A+ +
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 435 DKL 437
+L
Sbjct: 243 HRL 245
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 322/596 (54%), Gaps = 43/596 (7%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD--TLPHRDLVSWASVLSA 81
+ + +HAQ+ + G N L+ Y KC L A +F+ LP R +VSW +++SA
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
P AL I + +PD +++ A + L QG+ +HA +
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL--KQGRSIHASVV----- 249
Query: 142 NDDVVKSTLVDMYAKFGL---PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF 198
K GL PD + SLN++ YA+ G+ + A LF
Sbjct: 250 --------------KMGLEIEPDL-------LISLNTM--------YAKCGQVATAKILF 280
Query: 199 RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
+ NL W A+ISG ++G +A F +M + + D + ++S + ACA +
Sbjct: 281 DKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR-PDTISITSAISACAQVGSL 339
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
E + ++ V Y VFIS+AL+DM+AKC + A+ +F +DVV W+++IVG
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
HG+A EA++LY M V PN+VTF+GL+ AC++ G+V +G F M D+ I P
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQ 458
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
QHY C++DL R+GHLD+A +I+ MPV P W ALLSACK H + ++ A +L
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGE 498
+ P + Y+ LSN+YA A +W+ V++VR M K + K+ G S +++ F G+
Sbjct: 519 SIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGD 578
Query: 499 TSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLK 558
SHP +EI + +++ +++ G+V + LHD++ +E E L HSER+A+AYGL+
Sbjct: 579 KSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLIS 638
Query: 559 AVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
GT +RI KNLR C +CH KLIS + REI VRD R+HHFKDG CSC D+W
Sbjct: 639 TPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 196/412 (47%), Gaps = 42/412 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++HA+++ GL L+ A G + A Q+FD LP + W +++ +
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
N AL + ++ PD F F L+KAC+ + H+ G+ VHA + D
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS--HLQMGRFVHAQVFRLGFDADVF 155
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDS--ISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V++ L+ +YAK R VF+ + +SWTA++S YA++G EAL +F +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 204 KNLFA-WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
++ W AL+S L +AF ++Q G+
Sbjct: 216 MDVKPDWVALVSVL-------NAFTCLQDLKQ--------------------------GR 242
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+H V+ +G E + +L MYAKC + AK +F +M +++ W ++I G A++G
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM-VEDYGIKPSLQH 381
A EA+ ++ +M++ V+P+ ++ I AC+ VG + + R+++ + DY + +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY--RDDVFI 360
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+ L+D+F++ G + E L+ + D W+A++ HG + A+ +
Sbjct: 361 SSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 54/379 (14%)
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
+ G D F +++LI + H Q KQ+HA L+ + + L+ + FG
Sbjct: 15 NSGIHSDSF-YASLIDSAT-----HKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGD 68
Query: 160 PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS 219
+ R VFD + P +F W A+I G ++
Sbjct: 69 ITFARQVFDDL-------------------------------PRPQIFPWNAIIRGYSRN 97
Query: 220 GNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFI 279
+ DA + M+ ++ D ++ AC+ L+ ++G+ VH V LG+++ VF+
Sbjct: 98 NHFQDALLMYSNMQLARVS-PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 280 SNALVDMYAKCSDLVAAKYIF--CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSA 337
N L+ +YAKC L +A+ +F + + +VSWT+I+ AQ+G+ EAL ++ M
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 338 RVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYTCLLDLFSRSGHLD 396
VKP+ V V ++ A + + + +GR++ S+V+ I+P L L ++++ G +
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQVA 274
Query: 397 EAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYA 456
A+ L M SP+ W A++S +G + A+ + +++ K P + + S + A
Sbjct: 275 TAKILFDKMK-SPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVRPDTISITSAISA 332
Query: 457 GA---------SMWENVSK 466
A SM+E V +
Sbjct: 333 CAQVGSLEQARSMYEYVGR 351
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/571 (34%), Positives = 320/571 (56%), Gaps = 37/571 (6%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N+++ Y + G + DAL+LF +P ++++SW +++ + AL + +++L +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
F+ +I ACAN H+ G QVH + + ++ V ++L
Sbjct: 223 STSRPFTCVITACANAPAFHM--GIQVHGLIIKLGFLYEEYVSASL-------------- 266
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
I+ YA R ++ ++F E ++ + WTAL+SG + D
Sbjct: 267 -----------------ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A F M + I + + +S + +C+ L + GK++HG+ + LG E+ F+ N+LV
Sbjct: 310 ALSIFSGMLRNSI-LPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLV 368
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
MY+ ++ A +F ++ +K +VSW SIIVG AQHG+ + A ++ M+ +P+E+
Sbjct: 369 VMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI 428
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYG-IKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
TF GL+ ACS+ G + KGR LF M I +QHYTC++D+ R G L EAE LI
Sbjct: 429 TFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIE 488
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWEN 463
M V P+E W ALLSAC+ H + + A + L + ++Y+LLSN+YA A W N
Sbjct: 489 RMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSN 548
Query: 464 VSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGY 523
VSK+R M + K+PG S + + + H F++G+ H + I + L ++++ GY
Sbjct: 549 VSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSR--IYEKLEFLREKLKELGY 606
Query: 524 VPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKL 583
PD LHD++ ++KE L++HSERLA+A+GL+ V G+ + ++KNLRVC DCHTV+KL
Sbjct: 607 APDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKL 666
Query: 584 ISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IS + REI +RD R+HHFK+G CSC D+W
Sbjct: 667 ISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 202/436 (46%), Gaps = 50/436 (11%)
Query: 38 SQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRS 97
S H ++ Y + L DAL LFD +P RD+VSW S++S C
Sbjct: 63 SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC--------------- 107
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST-LVDMYAK 156
C +M A L VV T +V+ +
Sbjct: 108 -----------------VECGDMNT----------AVKLFDEMPERSVVSWTAMVNGCFR 140
Query: 157 FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGL 216
G D +F + ++ +W +M+ GY + G+ +AL+LF++ P KN+ +WT +I GL
Sbjct: 141 SGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200
Query: 217 VQSGNGVDAFYTFVKMRQEGI-TIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYES 275
Q+ +A F M + I + + P + V+ ACAN + +G QVHGL+I LG+
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPF--TCVITACANAPAFHMGIQVHGLIIKLGFLY 258
Query: 276 CVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV 335
++S +L+ YA C + ++ +F E + V WT+++ G + + + E+AL+++ M+
Sbjct: 259 EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML 318
Query: 336 SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHL 395
+ PN+ TF + +CS +G + G+ + V+ G++ L+ ++S SG++
Sbjct: 319 RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNV 377
Query: 396 DEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVY 455
++A ++ + +W +++ C HG + A I +++ L E I + +
Sbjct: 378 NDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDE--ITFTGLL 434
Query: 456 AGASMWENVSKVRKLM 471
+ S + K RKL
Sbjct: 435 SACSHCGFLEKGRKLF 450
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 141/338 (41%), Gaps = 70/338 (20%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H IIK G E +L+ Y C + D+ ++FD H + W ++LS +L
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
ALSI +L P+ F++ + +C+ +G L + GK++H + D V
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL--DWGKEMHGVAVKLGLETDAFV 363
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++LV MY+ G + +VF I + +SW ++I G A+ GR A +F +
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQ------ 417
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV-H 265
+++ +E D + + ++ AC++ E G+++ +
Sbjct: 418 ----------------------MIRLNKE----PDEITFTGLLSACSHCGFLEKGRKLFY 451
Query: 266 GLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ G+ + + + +VD+ +C G+
Sbjct: 452 YMSSGINHIDRKIQHYTCMVDILGRC-------------------------------GKL 480
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
+EA L + MV VKPNE+ ++ L+ AC V +G
Sbjct: 481 KEAEELIERMV---VKPNEMVWLALLSACRMHSDVDRG 515
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 123/300 (41%), Gaps = 55/300 (18%)
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
+I + S R EA +F + P ++ +T +I+G +S VDA F +M +
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIG-------------------LGYESCVFIS- 280
+ ++ V N AV + V+ L Y+ V +
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 281 --NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
N++V Y + + A +F +M K+V+SWT++I G Q+ ++ EAL L+ +M+
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 339 VKPNEVTFVGLIYACSNV----------GLVSKGRALFRSMVE----------------- 371
+K F +I AC+N GL+ K L+ V
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 372 ---DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHG 425
D + + +T LL +S + ++A ++ M + P++ T+A+ L++C G
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H +K GL N+L+ Y G + DA+ +F + + +VSW S++ C
Sbjct: 346 KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQH 405
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A I ++ +PD F+ L+ AC++ G L +G+++ + D
Sbjct: 406 GRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLE--KGRKLFYYMSSGINHIDRK 463
Query: 146 VK--STLVDMYAKFG-LPDYGRAVFDSISSLNSISWTAMISG---YARSGRRSEALRLFR 199
++ + +VD+ + G L + + + N + W A++S ++ R +A
Sbjct: 464 IQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGI 237
K+ A+ L + +G + VKM++ GI
Sbjct: 524 NLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGI 561
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/599 (35%), Positives = 333/599 (55%), Gaps = 41/599 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH-RDLVSWASVLSAC 82
L K+LH + G + N + Y K GLL++A+ +F + RD VSW S++ A
Sbjct: 156 LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAY 215
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+AL++ + ++ +GF+ D F ++++ A ++ H+ G+Q H + + +
Sbjct: 216 GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD--HLIGGRQFHGKLIKAGFHQ 273
Query: 143 DDVVKSTLVDMYAKFGLPDY---GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
+ V S L+D Y+K G D VF I S + + W MISGY+ + SE
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE------ 327
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
+A +F +M++ G D V AC+NL+
Sbjct: 328 ------------------------EAVKSFRQMQRIGHR-PDDCSFVCVTSACSNLSSPS 362
Query: 260 LGKQVHGLVIGLGYESC-VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
KQ+HGL I S + ++NAL+ +Y K +L A+++F M + VS+ +I G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
AQHG EAL LY M+ + + PN++TFV ++ AC++ G V +G+ F +M E + I+P
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+HY+C++DL R+G L+EAE I MP P WAALL AC+ H N +A R A++L+
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELM 542
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGE 498
++P + Y++L+N+YA A WE ++ VRK M K ++K+PG S I++ K+ HVF A +
Sbjct: 543 VMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAED 602
Query: 499 TSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVL---HDMDQQEKERQLFWHSERLAVAYG 555
SHPM E+ + ++ +M+K GYV D + + + + ++E +L HSE+LAVA+G
Sbjct: 603 WSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFG 662
Query: 556 LLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
L+ G + +VKNLR+CGDCH +K +S + REI VRD R+H FKDGKCSC D+W
Sbjct: 663 LMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 9/297 (3%)
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
GK +HA ++ S A+ + + V++Y+K G Y RA F S N S+ ++ YA+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
+ A +LF E P + ++ LISG + A F +MR+ G + D LS
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEV-DGFTLSG 145
Query: 248 VVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR-K 306
++ AC + +L KQ+H + G++S ++NA V Y+K L A +F M +
Sbjct: 146 LIAACCDRV--DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
D VSW S+IV QH + +ALALY +M+ K + T ++ A +++ + GR
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLD---EAENLIRTMPVSPDEPTWAALLSA 420
+++ G + + L+D +S+ G D ++E + + + +SPD W ++S
Sbjct: 264 GKLIKA-GFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISG 318
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 195/486 (40%), Gaps = 114/486 (23%)
Query: 14 LSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLV 73
L SVA + F K LHA +KS ++ N ++ Y KCG
Sbjct: 16 LKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCG------------------ 57
Query: 74 SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN------- 126
LS +R+ + +P+ F ++ ++KA A +H+
Sbjct: 58 -----------------RLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEI 100
Query: 127 -QGKQVHAHFLLSPYAN--DDVVKSTLVDMYAKFGLPDYGRAV----------------- 166
Q V + L+S YA+ + L K G G +
Sbjct: 101 PQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQL 160
Query: 167 --------FDSISSLNSISWTAMISGYARSGRRSEALRLFRE-SPYKNLFAWTALISGLV 217
FDS SS+N+ A ++ Y++ G EA+ +F ++ +W ++I
Sbjct: 161 HCFSVSGGFDSYSSVNN----AFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYG 216
Query: 218 QSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCV 277
Q G A + +M +G I D L+SV+ A +L G+Q HG +I G+
Sbjct: 217 QHKEGAKALALYKEMIFKGFKI-DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS 275
Query: 278 FISNALVDMYAKCS---DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ-AEEALALYDD 333
+ + L+D Y+KC + ++ +F E+ D+V W ++I G + + + +EEA+ +
Sbjct: 276 HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQ 335
Query: 334 MVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSG 393
M +P++ +FV + ACSN+ S+ + + ++ + + L+ L+ +SG
Sbjct: 336 MQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSG 395
Query: 394 HLDEAENLIRTMP----------------------------------VSPDEPTWAALLS 419
+L +A + MP ++P++ T+ A+LS
Sbjct: 396 NLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLS 455
Query: 420 ACKHHG 425
AC H G
Sbjct: 456 ACAHCG 461
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 21 SPFLTKKLHAQIIKSGL-SQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
SP K++H IKS + S N L+ Y K G LQDA +FD +P + VS+ ++
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ----VHAHF 135
AL + + +L G P+ F ++ ACA+ G V++G++ + F
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK--VDEGQEYFNTMKETF 477
Query: 136 LLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMI 182
+ P A S ++D+ + G + D++ S++W A++
Sbjct: 478 KIEPEAEH---YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 311/595 (52%), Gaps = 36/595 (6%)
Query: 22 PFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA 81
P K++HA +K G + D Y K L DA +LFD +P R+L +W + +S
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
P A+ P+ F + AC++ LH+N G Q+H L S +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW--LHLNLGMQLHGLVLRSGFD 241
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
D V + L+D Y K + R SE + F E
Sbjct: 242 TDVSVCNGLIDFYGK-----------------------------CKQIRSSEII--FTEM 270
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
KN +W +L++ VQ+ A +++ R++ + +D ++SSV+ ACA +A ELG
Sbjct: 271 GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD-FMISSVLSACAGMAGLELG 329
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+ +H + E +F+ +ALVDMY KC + ++ F EM K++V+ S+I G A
Sbjct: 330 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 389
Query: 322 GQAEEALALYDDMV--SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
GQ + ALAL+++M PN +TFV L+ ACS G V G +F SM YGI+P
Sbjct: 390 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 449
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
+HY+C++D+ R+G ++ A I+ MP+ P W AL +AC+ HG Q+ + A+ L
Sbjct: 450 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGET 499
L P+D +++LLSN +A A W + VR+ + +KK GYS I + + H F A +
Sbjct: 510 LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDR 569
Query: 500 SHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKA 559
SH + EI + KL EM GY PD L+D++++EK ++ HSE+LA+A+GLL
Sbjct: 570 SHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSL 629
Query: 560 VPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IRI KNLR+CGDCH+ K +S REI VRD R+H FKDG CSC D+W
Sbjct: 630 PLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
+I+ Y++ A + R +P +N+ +WT+LISGL Q+G+ A F +MR+EG+ +
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGV-VP 106
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
+ A A+L + GKQ+H L + G VF+ + DMY K A+ +F
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
E+ +++ +W + I + G+ EA+ + + PN +TF + ACS+ ++
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
G L +V G + L+D + + + +E +I T + + +W +L++A
Sbjct: 227 LGMQL-HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE-IIFTEMGTKNAVSWCSLVAA 284
Query: 421 -CKHHGNTQMAV 431
++H + + +V
Sbjct: 285 YVQNHEDEKASV 296
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 260 LGKQVHGLVI-GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
LG+ VH ++ L F++N L++MY+K +A+ + ++VVSWTS+I G
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
AQ+G AL + +M V PN+ TF A +++ L G+ + V+ I
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
+ D++ ++ D+A L +P E TW A +S G + A+
Sbjct: 144 FVGCSA-FDMYCKTRLRDDARKLFDEIPERNLE-TWNAFISNSVTDGRPREAI 194
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/598 (33%), Positives = 326/598 (54%), Gaps = 46/598 (7%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H +K G N+L+D Y KCG + +A ++F + R L+SW ++++ A
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 87 LPHRALSISRSLLHQGFQ--PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY--AN 142
+AL + + PD F ++L+KAC++ G ++ GKQ+H + S + +
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA--GKQIHGFLVRSGFHCPS 245
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
+ +LVD+Y K G R FD I
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKE------------------------------ 275
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
K + +W++LI G Q G V+A F ++ QE + D LSS++G A+ A+ GK
Sbjct: 276 -KTMISWSSLILGYAQEGEFVEAMGLFKRL-QELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 263 QVHGLVIGL--GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
Q+ L + L G E+ V N++VDMY KC + A+ F EM KDV+SWT +I G +
Sbjct: 334 QMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
HG ++++ ++ +M+ ++P+EV ++ ++ ACS+ G++ +G LF ++E +GIKP ++
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
HY C++DL R+G L EA++LI TMP+ P+ W LLS C+ HG+ ++ + LL +
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETS 500
++P++Y+++SN+Y A W R+L +K +KKE G S +++ +E H F +GE S
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 571
Query: 501 HPMKDEILGLMRKLDAEMRKR-GYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKA 559
HP+ I +++ + +R+ GYV + LHD+D + KE L HSE+LA+ L
Sbjct: 572 HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 631
Query: 560 ---VPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
G IR+ KNLRVC DCH +K +S I VRDA R+H F+DG CSC D+W
Sbjct: 632 GLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 231/465 (49%), Gaps = 41/465 (8%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H ++KSG + N L+D Y KC A ++FD++P R++VSW++++S L
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+LS+ + QG P+ F FST +KAC + L +G Q+H L + V
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE--KGLQIHGFCLKIGFEMMVEV 144
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++LVDMY+K G + VF I + ISW AMI+G+ +G S+AL F
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF-------- 196
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
G++Q N +K R D L+S++ AC++ + GKQ+HG
Sbjct: 197 --------GMMQEAN--------IKER------PDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 267 LVIGLGYE--SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
++ G+ S I+ +LVD+Y KC L +A+ F ++ K ++SW+S+I+G AQ G+
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYT 383
EA+ L+ + + + +I ++ L+ +G+ + V+ G++ S+
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LN 352
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLK 441
++D++ + G +DEAE M + D +W +++ HG + +VRI ++L ++
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVK-KEPGYSCI 485
P++ +LS + E KL+ +K + Y+C+
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 38/329 (11%)
Query: 112 TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS 171
++++ C G +QG QVH + L S + + + L+DMY K P VFDS+
Sbjct: 11 SILRVCTRKGL--SDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM- 67
Query: 172 SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVK 231
P +N+ +W+AL+SG V +G+ + F +
Sbjct: 68 ------------------------------PERNVVSWSALMSGHVLNGDLKGSLSLFSE 97
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
M ++GI + S+ + AC L E G Q+HG + +G+E V + N+LVDMY+KC
Sbjct: 98 MGRQGI-YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 156
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK--PNEVTFVGL 349
+ A+ +F + + ++SW ++I G G +AL + M A +K P+E T L
Sbjct: 157 RINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSL 216
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT-CLLDLFSRSGHLDEAENLIRTMPVS 408
+ ACS+ G++ G+ + +V PS T L+DL+ + G+L A +
Sbjct: 217 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-E 275
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKL 437
+W++L+ G A+ + +L
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS 304
L S++ C + + G QVH ++ G + SN L+DMY KC + + A +F M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
++VVSW++++ G +G + +L+L+ +M + PNE TF + AC + + KG
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 365 LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHH 424
+ G + ++ L+D++S+ G ++EAE + R + V +W A+++ H
Sbjct: 129 I-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVHA 186
Query: 425 G 425
G
Sbjct: 187 G 187
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 1 MSLSRHAYALKSQLSSVARQSPF----------LTKKLHAQIIKSGLSQHEPFPNTLLDA 50
M L + L SQ+ S A S K++ A +K N+++D
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDM 357
Query: 51 YGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVF 110
Y KCGL+ +A + F + +D++SW V++ L +++ I +L +PD +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 111 STLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK-STLVDMYAKFGLPDYGRAVFDS 169
++ AC++ G + +G+++ + L + V + +VD+ + G + + D+
Sbjct: 418 LAVLSACSHSG--MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDT 475
Query: 170 ISSLNSIS-WTAMIS 183
+ ++ W ++S
Sbjct: 476 MPIKPNVGIWQTLLS 490
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/553 (37%), Positives = 316/553 (57%), Gaps = 40/553 (7%)
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF 157
+L G +PD F ++K+ + +G + G+ +HA L + D V+ +LVDMYAK
Sbjct: 117 MLRLGVKPDRLTFPFVLKSNSKLGFRWL--GRALHAATLKNFVDCDSFVRLSLVDMYAKT 174
Query: 158 GL-----------PD----------------YGRA--------VFDSISSLNSISWTAMI 182
G PD Y RA +F S+ NS SW+ +I
Sbjct: 175 GQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLI 234
Query: 183 SGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
GY SG + A +LF P KN+ +WT LI+G Q+G+ A T+ +M ++G+ +
Sbjct: 235 KGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK-PNE 293
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
+++V+ AC+ G ++HG ++ G + I ALVDMYAKC +L A +F
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 303 MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
M+ KD++SWT++I G A HG+ +A+ + M+ + KP+EV F+ ++ AC N V G
Sbjct: 354 MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK 422
F SM DY I+P+L+HY ++DL R+G L+EA L+ MP++PD TWAAL ACK
Sbjct: 414 LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACK 473
Query: 423 HHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEP-G 481
H + A ++ LL L PE SYI L +A ++V K R+L + K +K+ G
Sbjct: 474 AHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEK-RRLSLQKRIKERSLG 532
Query: 482 YSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKER 541
+S I+L + + F AG+ SH + EI + ++ + ++GY P + +HD++++EKE
Sbjct: 533 WSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKEN 592
Query: 542 QLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYH 601
HSE+LA+ G L+ PGT IRI+KNLR+CGDCH+++K +S I R+I +RDA+++H
Sbjct: 593 VTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFH 652
Query: 602 HFKDGKCSCNDFW 614
HFKDG+CSC D+W
Sbjct: 653 HFKDGRCSCGDYW 665
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 2/159 (1%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
+TL+ Y G L A QLF+ +P +++VSW ++++ + A+S +L +G +
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
P+ + + ++ AC+ G L G ++H + L + D + + LVDMYAK G D
Sbjct: 291 PNEYTIAAVLSACSKSGAL--GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
VF +++ + +SWTAMI G+A GR +A++ FR+ Y
Sbjct: 349 TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 151/418 (36%), Gaps = 107/418 (25%)
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD F +LI AC + L + VHA L + V + LV + PDY
Sbjct: 27 PDESHFISLIHACKDTASL-----RHVHAQILRRGVLSSRVA-AQLVSCSSLLKSPDY-- 78
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
+L +FR S +N F ALI GL ++
Sbjct: 79 -----------------------------SLSIFRNSEERNPFVLNALIRGLTENARFES 109
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
+ F+ M + G+ D L V+ + + L LG+ +H + + F+ +LV
Sbjct: 110 SVRHFILMLRLGVK-PDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLV 168
Query: 285 DMYAK-----------------------------------CSDLVAAKYIFCEMSRKDVV 309
DMYAK D+ A +F M ++
Sbjct: 169 DMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG 228
Query: 310 SWTSIIVGTAQHGQA-------------------------------EEALALYDDMVSAR 338
SW+++I G G+ E A++ Y +M+
Sbjct: 229 SWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 339 VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEA 398
+KPNE T ++ ACS G + G + + D GIK T L+D++++ G LD A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRI-HGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 399 ENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYA 456
+ M D +W A++ HG A++ +++ E P + L+ + A
Sbjct: 348 ATVFSNMN-HKDILSWTAMIQGWAVHGRFHQAIQCFRQMM-YSGEKPDEVVFLAVLTA 403
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 3 LSRHAYALKSQLSSVARQSPFLTK-KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDAL 61
L + Y + + LS+ ++ + ++H I+ +G+ L+D Y KCG L A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 62 QLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
+F + H+D++SW +++ + H+A+ R +++ G +PD VF ++ AC N
Sbjct: 349 TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 325/601 (54%), Gaps = 35/601 (5%)
Query: 14 LSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLV 73
LSS +S +LH ++KSGLS N L++ Y K L D+ + F+ P +
Sbjct: 23 LSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSST 82
Query: 74 SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
+W+S++S LP +L + ++ +PD V + K+CA + + G+ VH
Sbjct: 83 TWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI--GRSVHC 140
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
+ + Y D V S+LVDMYAK G Y R
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYAR----------------------------- 171
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
++F E P +N+ W+ ++ G Q G +A + F + E + + D SSV+ CA
Sbjct: 172 --KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND-YSFSSVISVCA 228
Query: 254 NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
N + ELG+Q+HGL I ++S F+ ++LV +Y+KC A +F E+ K++ W +
Sbjct: 229 NSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNA 288
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDY 373
++ AQH ++ + L+ M + +KPN +TF+ ++ ACS+ GLV +GR F M E
Sbjct: 289 MLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR 348
Query: 374 GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
I+P+ +HY L+D+ R+G L EA +I MP+ P E W ALL++C H NT++A
Sbjct: 349 -IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFA 407
Query: 434 ADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHV 493
ADK+ L P +I LSN YA +E+ +K RKL+ + KKE G S ++ + H
Sbjct: 408 ADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHT 467
Query: 494 FYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVA 553
F AGE H EI + +L EM K GY+ DTSYVL ++D EK + + +HSERLA+A
Sbjct: 468 FAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIA 527
Query: 554 YGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDF 613
+GL+ IR++KNLRVCGDCH +K +S R I VRD R+H F+DGKCSCND+
Sbjct: 528 FGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDY 587
Query: 614 W 614
W
Sbjct: 588 W 588
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 303/526 (57%), Gaps = 36/526 (6%)
Query: 91 ALSISRSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST 149
A S+ R + G +PD + LIKA M V G+ +H+ + S + + V+++
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA--DVRLGETIHSVVIRSGFGSLIYVQNS 161
Query: 150 LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAW 209
L+ +YA G + A ++F + P K+L AW
Sbjct: 162 LLHLYAN-------------------------------CGDVASAYKVFDKMPEKDLVAW 190
Query: 210 TALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI 269
++I+G ++G +A + +M +GI D + S++ ACA + LGK+VH +I
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIK-PDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALA 329
+G + SN L+D+YA+C + AK +F EM K+ VSWTS+IVG A +G +EA+
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 330 LYDDMVSAR-VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDL 388
L+ M S + P E+TFVG++YACS+ G+V +G FR M E+Y I+P ++H+ C++DL
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 389 FSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSY 448
+R+G + +A I++MP+ P+ W LL AC HG++ +A ++L L+P Y
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 449 ILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEIL 508
+LLSN+YA W +V K+RK M+ VKK PG+S +++G H F G+ SHP D I
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY 489
Query: 509 GLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIV 568
++++ +R GYVP S V D++++EKE + +HSE++A+A+ L+ + I +V
Sbjct: 490 AKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVV 549
Query: 569 KNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
KNLRVC DCH +KL+S + +REI VRD R+HHFK+G CSC D+W
Sbjct: 550 KNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
N+F W LI G + GN + AF + +MR G+ D ++ A +A LG+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H +VI G+ S +++ N+L+ +YA C D+ +A +F +M KD+V+W S+I G A++G+
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
EEALALY +M S +KP+ T V L+ AC+ +G ++ G+ + M++ G+ +L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNV 262
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
LLDL++R G ++EA+ L M V + +W +L+ +G + A+ +
Sbjct: 263 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIEL 310
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + +H+ +I+SG N+LL Y CG + A ++FD +P +DLV+W SV++
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
P AL++ + +G +PD F +L+ ACA +G L + GK+VH + + +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL--GKRVHVYMIKVGLTRN 256
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR--ES 201
+ L+D+YA+ G + + +FD + NS+SWT++I G A +G EA+ LF+ ES
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 202 PYKNL---FAWTALISGLVQSGNGVDAFYTFVKMRQE 235
L + ++ G + F F +MR+E
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/659 (33%), Positives = 350/659 (53%), Gaps = 75/659 (11%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K + A ++KSG E + L+DA KCG + A Q+FD + R +V+W S+++
Sbjct: 85 KTIQAHMLKSGFPA-EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG------------------------ 121
A+ + R ++ PD + S++ KA +++
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 122 -----PLHVNQGKQVHAHFLLSPYANDDVVKST-LVDMYAKFGLPDYGRAVFDSI----- 170
++V GK A +L DVV T L+ Y++ G F S+
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 171 --------------SSLNSI--------------------SWTAMISGYARSGRRSEALR 196
+L I S T++++ Y R ++LR
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 197 LFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA 256
+F+ Y N +WT+LISGLVQ+G A F KM ++ I + LSS + C+NLA
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK-PNSFTLSSALRGCSNLA 382
Query: 257 VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIV 316
++E G+Q+HG+V G++ + + L+D+Y KC A+ +F +S DV+S ++I
Sbjct: 383 MFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
AQ+G EAL L++ M++ ++PN+VT + ++ AC+N LV +G LF S +D I
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIM 501
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADK 436
+ HY C++DL R+G L+EAE ++ T ++PD W LLSACK H +MA RI K
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEAE-MLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRK 560
Query: 437 LLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYA 496
+L ++P D + IL+SN+YA W V +++ M ++KK P S +++ KE+H F A
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMA 620
Query: 497 GET-SHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYG 555
G+ SHP ++IL + +L + + GYV D S V DM++ KER L HSE+LA+A+
Sbjct: 621 GDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFA 680
Query: 556 LLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ + V G+ IRI+KNLRVC DCH+ +K++S + REI RD+KR+HHF+DG CSC D+W
Sbjct: 681 VWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 2 SLSRHAYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDA 60
S+ +++ L S L + + F +++H + K G + + + L+D YGKCG A
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 61 LQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
+FDTL D++S +++ + AL + +++ G QP+ +++ AC N
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN- 481
Query: 121 GPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTA 180
V +G + L + D ++ + D YA
Sbjct: 482 -SRLVEEGCE-----LFDSFRKDKIMLTN--DHYA------------------------C 509
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISG 215
M+ R+GR EA L E +L W L+S
Sbjct: 510 MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/431 (40%), Positives = 271/431 (62%), Gaps = 2/431 (0%)
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
YA G + A ++F + P K+L AW ++I+G ++G +A + +M +GI D
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK-PDGFT 91
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS 304
+ S++ ACA + LGK+VH +I +G + SN L+D+YA+C + AK +F EM
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR-VKPNEVTFVGLIYACSNVGLVSKGR 363
K+ VSWTS+IVG A +G +EA+ L+ M S + P E+TFVG++YACS+ G+V +G
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 364 ALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKH 423
FR M E+Y I+P ++H+ C++DL +R+G + +A I++MP+ P+ W LL AC
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 424 HGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS 483
HG++ +A ++L L+P Y+LLSN+YA W +V K+RK M+ VKK PG+S
Sbjct: 272 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 484 CIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQL 543
+++G H F G+ SHP D I ++++ +R GYVP S V D++++EKE +
Sbjct: 332 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAV 391
Query: 544 FWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHF 603
+HSE++A+A+ L+ + I +VKNLRVC DCH +KL+S + +REI VRD R+HHF
Sbjct: 392 VYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHF 451
Query: 604 KDGKCSCNDFW 614
K+G CSC D+W
Sbjct: 452 KNGSCSCQDYW 462
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 108/174 (62%), Gaps = 2/174 (1%)
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
LG+ +H +VI G+ S +++ N+L+ +YA C D+ +A +F +M KD+V+W S+I G A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
++G+ EEALALY +M S +KP+ T V L+ AC+ +G ++ G+ + M++ G+ +L
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNL 124
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
LLDL++R G ++EA+ L M V + +W +L+ +G + A+ +
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 114/217 (52%), Gaps = 7/217 (3%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + +H+ +I+SG N+LL Y CG + A ++FD +P +DLV+W SV++
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
P AL++ + +G +PD F +L+ ACA +G L + GK+VH + + +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL--GKRVHVYMIKVGLTRN 123
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR--ES 201
+ L+D+YA+ G + + +FD + NS+SWT++I G A +G EA+ LF+ ES
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 202 PYKNL---FAWTALISGLVQSGNGVDAFYTFVKMRQE 235
L + ++ G + F F +MR+E
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 220
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/602 (36%), Positives = 328/602 (54%), Gaps = 43/602 (7%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
T LH +K G + N L+ +Y K + A +LFD + ++VSW SV+S N
Sbjct: 47 FTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYN 106
Query: 84 LANLPHRALSISRSLLHQG--FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
P ALS+ + + H+ P+ + F+++ KAC+ + + GK +HA +S
Sbjct: 107 DMGKPQNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESRI--GKNIHARLEISGLR 163
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+ VV S+LVDMY K + R VFDS MI GY R
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDS-----------MI-GYGR-------------- 197
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT-IADPLVLSSVVGACANLAVWEL 260
N+ +WT++I+ Q+ G +A F + A+ +L+SV+ AC++L +
Sbjct: 198 ---NVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
GK HGLV GYES ++ +L+DMYAKC L A+ IF + V+S+TS+I+ A+
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
HG E A+ L+D+MV+ R+ PN VT +G+++ACS+ GLV++G M E YG+ P +
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT--WAALLSACKHHGNTQMAVRIADKLL 438
HYTC++D+ R G +DEA L +T+ V ++ W ALLSA + HG ++ + +L+
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLI 434
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGE 498
+ S+YI LSN YA + WE+ +R M KE S I+ +VF+AG+
Sbjct: 435 QSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGD 494
Query: 499 TSHPMKDEILGLMRKLDAEMRKRGY------VPDTSYVLHDMDQQEKERQLFWHSERLAV 552
S EI ++ L+ M++RG+ + +S V D+D++ K+ + H ERLA+
Sbjct: 495 LSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLAL 554
Query: 553 AYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCND 612
AYGLL G+ IRI+ NLR+C DCH KLIS I REI VRD R+H FK+G C+C D
Sbjct: 555 AYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRD 614
Query: 613 FW 614
+W
Sbjct: 615 YW 616
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 329/594 (55%), Gaps = 37/594 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + LH +++KS +H + L+ Y + G A +LFD +P RDLVSW S++S +
Sbjct: 49 LCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYS 108
Query: 84 LANLPHRALSI-SRSLLHQ-GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ + SR ++ + GF+P+ F ++I AC G +G+ +H
Sbjct: 109 GRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS--KEEGRCIHG-------- 158
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+ KFG V + + +N A I+ Y ++G + + +LF +
Sbjct: 159 -----------LVMKFG-------VLEEVKVVN-----AFINWYGKTGDLTSSCKLFEDL 195
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
KNL +W +I +Q+G F R+ G D +V+ +C ++ V L
Sbjct: 196 SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE-PDQATFLAVLRSCEDMGVVRLA 254
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+ +HGL++ G+ I+ AL+D+Y+K L + +F E++ D ++WT+++ A H
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G +A+ ++ MV + P+ VTF L+ ACS+ GLV +G+ F +M + Y I P L H
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
Y+C++DL RSG L +A LI+ MP+ P W ALL AC+ + +TQ+ + A++L L+
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSH 501
P D +Y++LSN+Y+ + +W++ S++R LM K + + G S I+ G + H F G+ SH
Sbjct: 435 PRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSH 494
Query: 502 PMKDEILGLMRKLDAEMRKR-GYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAV 560
P ++I ++++ +M+ GY T +VLHD+ + KE + HSE++A+A+GLL
Sbjct: 495 PESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVS 554
Query: 561 PGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
P I I KNLR+CGDCH K IS IE R I +RD+KR+HHF DG CSC+D+W
Sbjct: 555 PMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/618 (33%), Positives = 329/618 (53%), Gaps = 51/618 (8%)
Query: 4 SRHAYALKSQLSSVARQS-PFLTKKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDAL 61
S A++ L S A S P ++LH + K G + EPF T L+ Y KCGL+ DA
Sbjct: 50 SPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGG-CETEPFVLTALISMYCKCGLVADAR 108
Query: 62 QLFDTLPHRDLVS--WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
++F+ P +S + +++S + A + R + G D L+ C
Sbjct: 109 KVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTV 168
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
P ++ G+ +H + ++ V ++ + MY K G + GR +FD + I+W
Sbjct: 169 --PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWN 226
Query: 180 AMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
A+ISGY+++G + L L+ + M+ G+
Sbjct: 227 AVISGYSQNGLAYDVLELYEQ-------------------------------MKSSGVC- 254
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
DP L SV+ +CA+L ++G +V LV G+ VF+SNA + MYA+C +L A+ +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 300 FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
F M K +VSWT++I HG E L L+DDM+ ++P+ FV ++ ACS+ GL
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
KG LFR+M +Y ++P +HY+CL+DL R+G LDEA I +MPV PD W ALL
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLG 434
Query: 420 ACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE 479
ACK H N MA K++ +P + Y+L+SN+Y+ + E + ++R +M + +K+
Sbjct: 435 ACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 494
Query: 480 PGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMD---Q 536
PGYS ++ H+F AG+ SH +E+ ++ +L+ + + + +MD
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME---------LAGNMDCDRG 545
Query: 537 QEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRD 596
+E HSERLA+A+G+L ++PGT I ++KNLRVC DCH LK +S I R+ VRD
Sbjct: 546 EEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRD 605
Query: 597 AKRYHHFKDGKCSCNDFW 614
A R+H+FKDG CSC D+W
Sbjct: 606 ASRFHYFKDGVCSCKDYW 623
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 200/419 (47%), Gaps = 47/419 (11%)
Query: 75 WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG-PLHVNQGKQVHA 133
W L +L ++S+ RS+L G PD F F ++K+CA++ P+ G+Q+H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV---SGQQLHC 77
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS--ISSLNSISWTAMISGYARSGRR 191
H + V + L+ MY K GL R VF+ SS S+ + A+ISGY + +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 192 SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA 251
+ DA Y F +M++ G+++ D + + +V
Sbjct: 138 T-------------------------------DAAYMFRRMKETGVSV-DSVTMLGLVPL 165
Query: 252 CANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSW 311
C LG+ +HG + G +S V + N+ + MY KC + A + +F EM K +++W
Sbjct: 166 CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITW 225
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
++I G +Q+G A + L LY+ M S+ V P+ T V ++ +C+++G G + + +VE
Sbjct: 226 NAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK-LVE 284
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
G P++ + +++R G+L +A + MPV +W A++ HG ++ +
Sbjct: 285 SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGL 343
Query: 432 RIADKLL--CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG---YSCI 485
+ D ++ ++P+ ++LS + + R M +E K EPG YSC+
Sbjct: 344 MLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRA--MKREYKLEPGPEHYSCL 400
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 318/590 (53%), Gaps = 35/590 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+LH +K +E N + +Y KCG L A ++F + + + SW +++ +
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
N P +L + G PD F +L+ AC+ + L + GK+VH + + D
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL--GKEVHGFIIRNWLERDLF 532
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V +++ +Y G +A+FD++ K+
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMED-------------------------------KS 561
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
L +W +I+G +Q+G A F +M GI + + + V GAC+ L LG++ H
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG-ISMMPVFGACSLLPSLRLGREAH 620
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+ E FI+ +L+DMYAK + + +F + K SW ++I+G HG A+
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EA+ L+++M P+++TF+G++ AC++ GL+ +G M +G+KP+L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 386 LDLFSRSGHLDEAENLI-RTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
+D+ R+G LD+A ++ M D W +LLS+C+ H N +M ++A KL L+PE
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMK 504
P +Y+LLSN+YAG WE+V KVR+ M ++K+ G S I+L ++ F GE
Sbjct: 801 PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGF 860
Query: 505 DEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTI 564
+EI L L+ ++ K GY PDT V HD+ ++EK QL HSE+LA+ YGL+K GT
Sbjct: 861 EEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTT 920
Query: 565 IRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
IR+ KNLR+C DCH KLIS + REI VRD KR+HHFK+G CSC D+W
Sbjct: 921 IRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 206/485 (42%), Gaps = 59/485 (12%)
Query: 3 LSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSG-LSQHEPFPNTLLDAYGKCGLLQDAL 61
L R A L Q S R+ + +K+H + S L + ++ Y CG D+
Sbjct: 82 LVREALGLLLQASG-KRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSR 140
Query: 62 QLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANM 120
+FD L ++L W +V+S+ + L L ++ PDHF + +IKACA M
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200
Query: 121 GPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTA 180
+ + G VH + + D V + LV Y G +FD + N +SW +
Sbjct: 201 SDVGI--GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
MI ++ +G E+ L+ G + NG AF +
Sbjct: 259 MIRVFSDNGFSEESF----------------LLLGEMMEENGDGAF------------MP 290
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
D L +V+ CA LGK VHG + L + + ++NAL+DMY+KC + A+ IF
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSA--RVKPNEVTFVGLIYACSNVGL 358
+ K+VVSW +++ G + G + M++ VK +EVT + + C +
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLF----SRSGHLDEAENL---IRTMPVSPDE 411
+ + L Y +K + + + F ++ G L A+ + IR+ V+
Sbjct: 411 LPSLKEL-----HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN--- 462
Query: 412 PTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLM 471
+W AL+ + ++++ D L +K LL + + S+ SK++ L
Sbjct: 463 -SWNALIGGHAQSNDPRLSL---DAHLQMKISG-----LLPDSFTVCSLLSACSKLKSLR 513
Query: 472 MVKEV 476
+ KEV
Sbjct: 514 LGKEV 518
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 177/415 (42%), Gaps = 38/415 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H ++K+GL + N L+ YG G + DALQLFD +P R+LVSW S++ +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 88 PHRALSISRSLLHQ----GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ + ++ + F PD T++ CA + GK VH + +
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR--EREIGLGKGVHGWAVKLRLDKE 326
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V+ + L+DMY+K G + +F ++ N +SW M+ G++ G + R+
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ--- 383
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
++ G V AD + + + V C + + K+
Sbjct: 384 ------------MLAGGEDVK---------------ADEVTILNAVPVCFHESFLPSLKE 416
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H + + ++NA V YAKC L A+ +F + K V SW ++I G AQ
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+L + M + + P+ T L+ ACS + + G+ + ++ ++ ++ L Y
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYL 535
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+L L+ G L + L M +W +++ +G A+ + +++
Sbjct: 536 SVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 3/195 (1%)
Query: 7 AYALKSQLSSVAR-QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
++ + S LS+ ++ +S L K++H II++ L + ++L Y CG L LFD
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV 125
+ + LVSW +V++ P RAL + R ++ G Q + AC+ + L +
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
G++ HA+ L +D + +L+DMYAK G VF+ + ++ SW AMI GY
Sbjct: 616 --GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 673
Query: 186 ARSGRRSEALRLFRE 200
G EA++LF E
Sbjct: 674 GIHGLAKEAIKLFEE 688
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L ++ HA +K L +L+D Y K G + + ++F+ L + SW +++
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH--VNQGKQVHAHFLLSPYA 141
+ L A+ + + G PD F ++ AC + G +H + Q+ + F L P
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 142 NDDVVKSTLVDMYAKFGLPDYG-RAVFDSISSLNSIS-WTAMIS 183
+ ++DM + G D R V + +S + W +++S
Sbjct: 735 KH---YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/605 (32%), Positives = 329/605 (54%), Gaps = 41/605 (6%)
Query: 16 SVARQSPFLTK--KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLV 73
++ R P + + ++HA +I +G + L+ + LF ++P D
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDF 73
Query: 74 SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
+ SV+ + + LP ++ R +L P ++ F+++IK+CA++ L + GK VH
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI--GKGVHC 131
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
H ++S + D V++ LV Y+K G + R V
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV--------------------------- 164
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
F P K++ AW +L+SG Q+G +A F +MR+ G D S++ ACA
Sbjct: 165 ----FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE-PDSATFVSLLSACA 219
Query: 254 NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
LG VH +I G + V + AL+++Y++C D+ A+ +F +M +V +WT+
Sbjct: 220 QTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTA 279
Query: 314 IIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
+I HG ++A+ L++ M PN VTFV ++ AC++ GLV +GR++++ M +
Sbjct: 280 MISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT---WAALLSACKHHGNTQM 429
Y + P ++H+ C++D+ R+G LDEA I + + W A+L ACK H N +
Sbjct: 340 YRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDL 399
Query: 430 AVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGK 489
V IA +L+ L+P++P +++LSN+YA + + VS +R MM ++K+ GYS I++
Sbjct: 400 GVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Query: 490 ESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSER 549
++++F G+ SH EI + L + ++ GY P + V+H ++++EKE L +HSE+
Sbjct: 460 KTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEK 519
Query: 550 LAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCS 609
LAVA+GLLK V I IVKNLR+C DCH+ K IS + +R+I VRD R+HHF++G CS
Sbjct: 520 LAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCS 578
Query: 610 CNDFW 614
C D+W
Sbjct: 579 CLDYW 583
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 305/524 (58%), Gaps = 33/524 (6%)
Query: 91 ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
AL ++ +G +PD+F + L+KAC + + +GKQ+H D V+++L
Sbjct: 116 ALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS--IREGKQIHGQVFKLGLEADVFVQNSL 173
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT 210
++MY + G + AVF+ + S + SW++M+S A G SE L LFR
Sbjct: 174 INMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR----------- 222
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIG 270
G+ N +K + G+ S + ACAN LG +HG ++
Sbjct: 223 ----GMCSETN--------LKAEESGMV--------SALLACANTGALNLGMSIHGFLLR 262
Query: 271 LGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALAL 330
E + + +LVDMY KC L A +IF +M +++ ++++++I G A HG+ E AL +
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFS 390
+ M+ ++P+ V +V ++ ACS+ GLV +GR +F M+++ ++P+ +HY CL+DL
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 382
Query: 391 RSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYIL 450
R+G L+EA I+++P+ ++ W LS C+ N ++ A +LL L +P Y+L
Sbjct: 383 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 442
Query: 451 LSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGL 510
+SN+Y+ MW++V++ R + +K +K+ PG+S ++L ++H F + + SHP EI +
Sbjct: 443 ISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKM 502
Query: 511 MRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKN 570
+ +++ +++ GY PD + +L ++D++EK+ +L HS+++A+A+GLL PG+II+I +N
Sbjct: 503 LHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARN 562
Query: 571 LRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
LR+C DCHT K IS I REI VRD R+H FK G CSC D+W
Sbjct: 563 LRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 55/385 (14%)
Query: 113 LIKACANMGPLHVNQGKQVHAHFL-LSPYANDDVVKSTLVDMYAKFGLPD---YGRAVFD 168
L+K C N +++ KQVHA F+ LS + + S+++ A G + Y ++F
Sbjct: 36 LLKRCHN-----IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFR 90
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYT 228
I + + MI GY EAL + E ++Q GN D F T
Sbjct: 91 GIDDPCTFDFNTMIRGYVNVMSFEEALCFYNE---------------MMQRGNEPDNF-T 134
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA 288
+ P +L AC L GKQ+HG V LG E+ VF+ N+L++MY
Sbjct: 135 Y------------PCLLK----ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYG 178
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFV 347
+C ++ + +F ++ K SW+S++ A G E L L+ M S +K E V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV 407
+ AC+N G ++ G ++ ++ + + ++ T L+D++ + G LD+A ++ + M
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKME- 296
Query: 408 SPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLSNVYAGASMWENVS 465
+ T++A++S HG + A+R+ K++ L+P D Y+ + N + + + V
Sbjct: 297 KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP-DHVVYVSVLNACSHSGL---VK 352
Query: 466 KVRKLM--MVKEVKKEPG---YSCI 485
+ R++ M+KE K EP Y C+
Sbjct: 353 EGRRVFAEMLKEGKVEPTAEHYGCL 377
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H Q+ K GL N+L++ YG+CG ++ + +F+ L + SW+S++SA
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 86 NLPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ L + R + + + + + + ACAN G L N G +H L + +
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL--NLGMSIHGFLLRNISELNI 269
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF----RE 200
+V+++LVDMY K G D +F + N+++++AMISG A G ALR+F +E
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
+ + ++++ SG + F +M +EG
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 46 TLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQP 105
+L+D Y KCG L AL +F + R+ +++++++S L AL + ++ +G +P
Sbjct: 274 SLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP 333
Query: 106 DHFVFSTLIKACANMGPLHVNQGKQVHAHFL----LSPYANDDVVKSTLVDMYAKFGLPD 161
DH V+ +++ AC++ G V +G++V A L + P A LVD+ + GL +
Sbjct: 334 DHVVYVSVLNACSHSGL--VKEGRRVFAEMLKEGKVEPTAEH---YGCLVDLLGRAGLLE 388
Query: 162 YGRAVFDSIS-SLNSISWTAMIS 183
SI N + W +S
Sbjct: 389 EALETIQSIPIEKNDVIWRTFLS 411
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 324/589 (55%), Gaps = 34/589 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+ H +K GL HE NTL+ Y C +A+++ D LP+ DL ++S LS
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L + R ++ F ++ + + ++ +N+ L N QVH+ +
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDL--NLALQVHSRMV--------- 264
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+FG A A+I+ Y + G+ A R+F ++ +N
Sbjct: 265 ----------RFGFNAEVEAC------------GALINMYGKCGKVLYAQRVFDDTHAQN 302
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+F T ++ Q + +A F KM + + + + ++ + A L++ + G +H
Sbjct: 303 IFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVP-PNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
GLV+ GY + V + NALV+MYAK + A+ F M+ +D+V+W ++I G + HG
Sbjct: 362 GLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGR 421
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EAL +D M+ PN +TF+G++ ACS++G V +G F +++ + ++P +QHYTC+
Sbjct: 422 EALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDP 445
+ L S++G +AE+ +RT P+ D W LL+AC N ++ ++A+ + P D
Sbjct: 482 VGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDS 541
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
Y+LLSN++A + WE V+KVR LM + VKKEPG S I + ++HVF A + HP
Sbjct: 542 GVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEIT 601
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTII 565
I ++++ ++++ GY PD + HD+D++++E L +HSE+LAVAYGL+K + +
Sbjct: 602 LIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPL 661
Query: 566 RIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ KN+R+C DCH+ +KLIS I R I +RD+ R+HHF DG+CSC D+W
Sbjct: 662 YVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 206/433 (47%), Gaps = 42/433 (9%)
Query: 12 SQLSSVARQSPFLT--KKLHAQII---KSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
++L V S +L + +HA +I +S ++ N+L++ Y KC A +LFD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLHV 125
+P R++VSW +++ + L + +S+ G +P+ FV + + K+C+N G +
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG--RI 152
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
+GKQ H FL + + V++TLV MY ++ SG
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMY-------------------------SLCSG- 186
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
EA+R+ + PY +L +++ +SG ++ G + K E + L
Sbjct: 187 -----NGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYL 241
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
SS + +NL L QVH ++ G+ + V AL++MY KC ++ A+ +F +
Sbjct: 242 SS-LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHA 300
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
+++ T+I+ Q EEAL L+ M + V PNE TF L+ + + + L+ +G L
Sbjct: 301 QNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-DL 359
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
+V G + + L++++++SG +++A M D TW ++S C HHG
Sbjct: 360 LHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Query: 426 NTQMAVRIADKLL 438
+ A+ D+++
Sbjct: 419 LGREALEAFDRMI 431
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 6 HAYALKSQLSSVARQSPFLTKK---LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQ 62
+ Y L+S+A S L K+ LH ++KSG H N L++ Y K G ++DA +
Sbjct: 337 NEYTFAILLNSIAELS--LLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARK 394
Query: 63 LFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP 122
F + RD+V+W +++S C+ L AL ++ G P+ F +++AC+++G
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG- 453
Query: 123 LHVNQG----KQVHAHFLLSP 139
V QG Q+ F + P
Sbjct: 454 -FVEQGLHYFNQLMKKFDVQP 473
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESCV---FISNALVDMYAKCSDLVAAKYIFC 301
L+ ++ CAN + +G+ +H +I S + N+L+++Y KC + V A+ +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNVGLVS 360
M ++VVSW +++ G G E L L+ M S +PNE + +CSN G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 361 KGRALFRSMVEDYGI 375
+G+ F YG+
Sbjct: 154 EGKQ-FHGCFLKYGL 167
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 311/592 (52%), Gaps = 46/592 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++HA +I++GL + +++ Y KCG L A ++FD + + V+ ++ A
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
AL + L+ +G + D FVFS ++KACA++ L N GKQ+HA ++
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL--NLGKQIHACVAKLGLESEVS 321
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V + LVD Y K + F I N +SW+A+ISGY + + EA++
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK--------- 372
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
TF +R + +I + +S+ AC+ LA +G QVH
Sbjct: 373 ----------------------TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
I + +AL+ MY+KC L A +F M D+V+WT+ I G A +G A
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EAL L++ MVS +KPN VTF+ ++ ACS+ GLV +G+ +M+ Y + P++ HY C+
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDP 445
+D+++RSG LDEA ++ MP PD +W LS C H N ++ ++L L PED
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDT 590
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
+ Y+L N+Y A WE +++ KLM + +KKE S I + H F G+ HP
Sbjct: 591 AGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQ 650
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTI- 564
EI +++ D M + + E+ QL HSERLA+A+GL+ +V G
Sbjct: 651 EIYEKLKEFDGFMEGD---------MFQCNMTERREQLLDHSERLAIAFGLI-SVHGNAP 700
Query: 565 --IRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
I++ KNLR C DCH K +S + EI +RD++R+HHFK+GKCSCND+W
Sbjct: 701 APIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 197/407 (48%), Gaps = 51/407 (12%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N +L Y +C L+DA +LFD + + VS +++SA + +A+ + +L G +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
P +++TL+K+ N P ++ G+Q+HAH + + ++ +++ +V+MY K G
Sbjct: 182 PPSSMYTTLLKSLVN--PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG------ 233
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
W A R+F + K A T L+ G Q+G D
Sbjct: 234 -------------WLV------------GAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A FV + EG+ D V S V+ ACA+L LGKQ+H V LG ES V + LV
Sbjct: 269 ALKLFVDLVTEGVEW-DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP-NE 343
D Y KCS +A F E+ + VSW++II G Q Q EEA+ + + S N
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 344 VTFVGLIYACS-----NVGLVSKGRALFRSMV-EDYGIKPSLQHYTCLLDLFSRSGHLDE 397
T+ + ACS N+G A+ RS++ YG + L+ ++S+ G LD+
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG-------ESALITMYSKCGCLDD 440
Query: 398 AENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC--LKP 442
A + +M +PD W A +S ++GN A+R+ +K++ +KP
Sbjct: 441 ANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKP 486
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 165/354 (46%), Gaps = 42/354 (11%)
Query: 89 HRALSISRSLLHQ----GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
HR L+ + L + G + + L +AC + L + G+ +H +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSL--SHGRLLHDRMRMGIENPSV 118
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
++++ ++ MY + + +FD +S LN++S T MIS YA G +A+ LF
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF------ 172
Query: 205 NLFAWTALISGLVQSGNG-VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
SG++ SG+ + YT +L S+V N + G+Q
Sbjct: 173 ---------SGMLASGDKPPSSMYT--------------TLLKSLV----NPRALDFGRQ 205
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H VI G S I +V+MY KC LV AK +F +M+ K V+ T ++VG Q G+
Sbjct: 206 IHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR 265
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
A +AL L+ D+V+ V+ + F ++ AC+++ ++ G+ + + V G++ + T
Sbjct: 266 ARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI-HACVAKLGLESEVSVGT 324
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
L+D + + + A + + P++ +W+A++S + AV+ L
Sbjct: 325 PLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 39/306 (12%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-C 82
L K++HA + K GL L+D Y KC + A + F + + VSW++++S C
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 83 NLANLPHRALSISRSLLHQGFQP-DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
++ A+ +SL + + F ++++ +AC+ + N G QVHA +
Sbjct: 363 QMSQF-EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD--CNIGGQVHADAIKRSLI 419
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+S L+ MY+K G D VF+S+ + + ++WTA ISG+A G SEALRLF +
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK- 478
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
+V G M+ +T +V+ AC++ + E G
Sbjct: 479 --------------MVSCG-----------MKPNSVTFI------AVLTACSHAGLVEQG 507
Query: 262 KQ-VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS-RKDVVSWTSIIVGTA 319
K + ++ + + ++D+YA+ L A M D +SW + G
Sbjct: 508 KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCW 567
Query: 320 QHGQAE 325
H E
Sbjct: 568 THKNLE 573
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 361 bits (926), Expect = e-99, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 319/593 (53%), Gaps = 39/593 (6%)
Query: 27 KLHAQIIKSGLSQHEP-FPNTLLDAYGKCGLLQDALQLFDTLPHRDLVS---WASVLSAC 82
K+ + I+ + +H P + L+ + C L A ++FD + L++ WA++
Sbjct: 152 KICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGY 211
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ P AL + +L +P +F S +KAC ++ L V +G +HA +
Sbjct: 212 SRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRG--IHAQIVKRKEKV 269
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
D VV + L+ +Y + GL D R VFD +S
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSE------------------------------ 299
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
+N+ W +LIS L + + F F KM++E I + L++++ AC+ +A GK
Sbjct: 300 -RNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWA-TLTTILPACSRVAALLTGK 357
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
++H ++ + V + N+L+DMY KC ++ ++ +F M KD+ SW ++ A +G
Sbjct: 358 EIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAING 417
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
EE + L++ M+ + V P+ +TFV L+ CS+ GL G +LF M ++ + P+L+HY
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHY 477
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
CL+D+ R+G + EA +I TMP P W +LL++C+ HGN + A +L L+P
Sbjct: 478 ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGET-SH 501
+P +Y+++SN+YA A MW+NV K+R++M + VKKE G S + + + +F AG
Sbjct: 538 HNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEF 597
Query: 502 PMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVP 561
DE + +L + K GY P+TS VLHD+D++ K + HSERLA Y L+
Sbjct: 598 RNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGE 657
Query: 562 GTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
G IRI KNLRVC DCH+ +K++S + R I +RD KR+HHF DG CSC D+W
Sbjct: 658 GVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 9 ALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL 67
L + L + +R + LT K++HAQI+KS P N+L+D YGKCG ++ + ++FD +
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 68 PHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQ 127
+DL SW +L+ + +++ ++ G PD F L+ C++
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT------- 451
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSIS-----WTAMI 182
GL +YG ++F+ + + +S + ++
Sbjct: 452 ------------------------------GLTEYGLSLFERMKTEFRVSPALEHYACLV 481
Query: 183 SGYARSGRRSEALRLFRESPYK-NLFAWTALISGLVQSGN 221
R+G+ EA+++ P+K + W +L++ GN
Sbjct: 482 DILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 352 bits (904), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 319/595 (53%), Gaps = 37/595 (6%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD---ALQLFDTLPHRDLVSWASVLSAC 82
+++HA ++++ L ++ + L + +D + ++F + L +++ A
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTL-IKACANMGPLHVNQGKQVHAHFLLSPYA 141
+L+ P + RSL P + + S+ +K C G L G Q+H +
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL--GGLQIHGKIFSDGFL 145
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+D ++ +TL+D+Y+ VFD I +++SW + S Y R+ R + L LF +
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
N VD ++ +G+T L ACANL + G
Sbjct: 206 K------------------NDVDGC-----VKPDGVTCLLAL------QACANLGALDFG 236
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
KQVH + G + +SN LV MY++C + A +F M ++VVSWT++I G A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQ 380
G +EA+ +++M+ + P E T GL+ ACS+ GLV++G F M ++ IKP+L
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
HY C++DL R+ LD+A +LI++M + PD W LL AC+ HG+ ++ R+ L+ L
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETS 500
K E+ Y+LL N Y+ WE V+++R LM K + +PG S I+L H F + S
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 501 HPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMD-QQEKERQLFWHSERLAVAYGLLKA 559
HP K+EI ++ +++ +++ GYV + + LH+++ ++EK L +HSE+LA+A+G+L
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVT 536
Query: 560 VPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
PGT IR+ KNLR C DCH K +S + R + VRD R+HHFK G CSCNDFW
Sbjct: 537 PPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 321/595 (53%), Gaps = 40/595 (6%)
Query: 25 TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-CN 83
K+++ ++ +G + N +L + KCG++ DA +LFD +P R+L S+ S++S N
Sbjct: 142 VKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN 201
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
N A + + + + + F+ +++A A +G ++V GKQ+H L ++
Sbjct: 202 FGNYVE-AFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV--GKQLHVCALKLGVVDN 258
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V L+DMY+K G + R F+ + P
Sbjct: 259 TFVSCGLIDMYSKCGDIEDARCAFECM-------------------------------PE 287
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
K AW +I+G G +A MR G++I D LS ++ LA EL KQ
Sbjct: 288 KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAKLELTKQ 346
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
H +I G+ES + + ALVD Y+K + A+Y+F ++ RK+++SW +++ G A HG+
Sbjct: 347 AHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGR 406
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+A+ L++ M++A V PN VTF+ ++ AC+ GL +G +F SM E +GIKP HY
Sbjct: 407 GTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYA 466
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C+++L R G LDEA IR P+ WAALL+AC+ N ++ +A+KL + PE
Sbjct: 467 CMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPE 526
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGET---- 499
+Y+++ N+Y + V + + K + P + +++G ++H F +G+
Sbjct: 527 KLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSY 586
Query: 500 SHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKA 559
+ +K +I + +L E+ + GY + ++L D+D++E+ER +HSE+LA+AYGL+
Sbjct: 587 NETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNT 646
Query: 560 VPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
++I +N R+C +CH V++ IS + RE+ VRDA R+HHFK+GKCSC +W
Sbjct: 647 PEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 7/233 (3%)
Query: 6 HAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
H +A+ + +S S ++ K+LH +K G+ + L+D Y KCG ++DA F+
Sbjct: 225 HTFAVMLR-ASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE 283
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV 125
+P + V+W +V++ L AL + + G D F S +I+ + L +
Sbjct: 284 CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLEL 343
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
KQ HA + + + ++ V + LVD Y+K+G D R VFD + N ISW A++ GY
Sbjct: 344 T--KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 186 ARSGRRSEALRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQ 234
A GR ++A++LF + N+ + A++S SG + F+ M +
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSE 454
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 236 GITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
G++ D LV AC L K+V+G ++ G+E ++ N ++ M+ KC ++
Sbjct: 122 GVSTYDALV-----EACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID 176
Query: 296 AKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSN 355
A+ +F E+ +++ S+ SII G G EA L+ M TF ++ A +
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 356 VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWA 415
+G + G+ L ++ G+ + L+D++S+ G +++A MP W
Sbjct: 237 LGSIYVGKQLHVCALK-LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWN 294
Query: 416 ALLSACKHHGNTQMAV 431
+++ HG ++ A+
Sbjct: 295 NVIAGYALHGYSEEAL 310
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 287/501 (57%), Gaps = 12/501 (2%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H+ I KS + L+D Y KCG + DA ++FD + R++VSW S+++ C N
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLIT-CFEQN 231
Query: 87 LPH-RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
P AL + + +L +PD +++I ACA++ + V G++VH + + +D+
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKV--GQEVHGRVVKNDKLRNDI 289
Query: 146 VKST-LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
+ S VDMYAK R +FDS+ N I+ T+MISGYA + A +F + +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
N+ +W ALI+G Q+G +A F +++E + ++++ ACA+LA LG Q
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVC-PTHYSFANILKACADLAELHLGMQA 408
Query: 265 H------GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
H G G E +F+ N+L+DMY KC + +F +M +D VSW ++I+G
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
AQ+G EAL L+ +M+ + KP+ +T +G++ AC + G V +GR F SM D+G+ P
Sbjct: 469 AQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL 528
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
HYTC++DL R+G L+EA+++I MP+ PD W +LL+ACK H N + +A+KLL
Sbjct: 529 RDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLL 588
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGE 498
++P + Y+LLSN+YA WE+V VRK M + V K+PG S I + HVF +
Sbjct: 589 EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKD 648
Query: 499 TSHPMKDEILGLMRKLDAEMR 519
SHP K +I L+ L AEMR
Sbjct: 649 KSHPRKKQIHSLLDILIAEMR 669
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 233/523 (44%), Gaps = 152/523 (29%)
Query: 10 LKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH 69
+KS+LS++ + +HA +IKSG S N L+DAY KCG L+D Q+FD +P
Sbjct: 30 IKSKLSAI------YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ 83
Query: 70 RDLVSWASVLSACNLANLPHRALSISRS------------------------------LL 99
R++ +W SV++ A S+ RS ++
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 100 H-QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG 158
H +GF + + F++++ AC+ + + N+G QVH+ SP+ +D + S LVDMY+K G
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDM--NKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 159 LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQ 218
+ + VFD + N +SW ++I+ + ++G EAL
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL----------------------- 238
Query: 219 SGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI-GLGYESCV 277
D F ++ R E D + L+SV+ ACA+L+ ++G++VHG V+ + +
Sbjct: 239 -----DVFQMMLESRVE----PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 278 FISNALVDMYAKCSDLVAAKYI-------------------------------FCEMSRK 306
+SNA VDMYAKCS + A++I F +M+ +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV---------- 356
+VVSW ++I G Q+G+ EEAL+L+ + V P +F ++ AC+++
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 357 -------------------------------GLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
G V +G +FR M+E + + +
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS-----WNAM 464
Query: 386 LDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKHHG 425
+ F+++G+ +EA L R M S PD T +LSAC H G
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 170/300 (56%), Gaps = 6/300 (2%)
Query: 110 FSTLIKAC--ANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVF 167
F+ L+ +C + + ++V + VHA + S ++N+ +++ L+D Y+K G + GR VF
Sbjct: 22 FAKLLDSCIKSKLSAIYV---RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 168 DSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFY 227
D + N +W ++++G + G EA LFR P ++ W +++SG Q +A
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
F M +EG + + +SV+ AC+ L G QVH L+ + S V+I +ALVDMY
Sbjct: 139 YFAMMHKEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 288 AKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFV 347
+KC ++ A+ +F EM ++VVSW S+I Q+G A EAL ++ M+ +RV+P+EVT
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV 407
+I AC+++ + G+ + +V++ ++ + +D++++ + EA + +MP+
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 319/602 (52%), Gaps = 17/602 (2%)
Query: 26 KKLHAQIIKSGLSQ--HEPFPNTLLDAYGKCGLLQDALQLFDTLP--HRDLVSWASVLSA 81
K+LHA + SGL + N L Y G + A +LFD +P +D V W ++LS+
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ L ++ + + + + D L CA + L Q Q H +
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ--QGHGVAVKMGVL 143
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
V + L+DMY K GL + +F+ + + +SWT ++ + +F E
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
P +N AWT +++G + +G + +M + + L S++ ACA +G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 262 KQVHGLVIG----LGYESC---VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
+ VH + +G E+ V + ALVDMYAKC ++ ++ +F M +++VV+W ++
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
G A HG+ + ++ M+ VKP+++TF ++ ACS+ G+V +G F S+ YG
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYG 381
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
++P + HY C++DL R+G ++EAE L+R MPV P+E +LL +C HG ++A RI
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 435 DKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
+L+ + P + IL+SN+Y + +R + + ++K PG S I + H F
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 495 YAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVL--HDMDQQEKERQLFWHSERLAV 552
+G+ SHP EI + ++ +R GYVPD S ++ + D +EKE+ L HSE+LAV
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAV 561
Query: 553 AYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCND 612
+GLL+ P T + + KNLR+C DCH+ +K++S + REI +RD R+H FK G CSC+D
Sbjct: 562 CFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSD 621
Query: 613 FW 614
+W
Sbjct: 622 YW 623
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 305/590 (51%), Gaps = 39/590 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + +HA +I +G + N+L Y G ++A +LF + +D+VSW +++S
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
LP +A+ R + +PD + ++ ACA +G L + G ++H + + +
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL--DTGVELHKLAIKARLISY 432
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+V + L++MY+K D +AL +F P
Sbjct: 433 VIVANNLINMYSKCKCID-------------------------------KALDIFHNIPR 461
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA-DPLVLSSVVGACANLAVWELGK 262
KN+ +WT++I+GL + F + +RQ +T+ + + L++ + ACA + GK
Sbjct: 462 KNVISWTSIIAGLRLNNR---CFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGK 518
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
++H V+ G F+ NAL+DMY +C + A F +KDV SW ++ G ++ G
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERG 577
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
Q + L+D MV +RV+P+E+TF+ L+ CS +V +G F M EDYG+ P+L+HY
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHY 636
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C++DL R+G L EA I+ MPV+PD W ALL+AC+ H + A + L
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDK 696
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
+ YILL N+YA W V+KVR++M + + G S +++ + H F + + HP
Sbjct: 697 KSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHP 756
Query: 503 MKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPG 562
EI ++ +M + G + D + ++ HSER A+A+GL+ VPG
Sbjct: 757 QTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPG 816
Query: 563 TIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCND 612
I + KNL +C +CH +K IS REI VRDA+ +HHFKDG+CSC D
Sbjct: 817 MPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 197/414 (47%), Gaps = 40/414 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H +++ G N L+ Y KCG ++ A LFD +P RD++SW +++S
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ H L + ++ PD +++I AC +G + G+ +HA+ + + +A D
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL--GRDIHAYVITTGFAVDIS 333
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V ++L MY LN+ SW EA +LF K+
Sbjct: 334 VCNSLTQMY------------------LNAGSW-------------REAEKLFSRMERKD 362
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ +WT +ISG + A T+ M Q+ + D + +++V+ ACA L + G ++H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK-PDEITVAAVLSACATLGDLDTGVELH 421
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
L I S V ++N L++MY+KC + A IF + RK+V+SWTSII G + +
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED-YGIKPSLQHYTC 384
EAL M ++PN +T + AC+ +G + G+ + ++ G+ L +
Sbjct: 482 EALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--A 538
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
LLD++ R G ++ A + + D +W LL+ G M V + D+++
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 172/383 (44%), Gaps = 45/383 (11%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSI-SRSLLHQGF 103
N L + + G L DA +F + R+L SW ++ A+ + R L G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+PD + F +++ C + L +GK+VH H + Y D V + L+ MY K G
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLA--RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
R +FD + + ISW AMISGY +G E L LF G V
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF-----------------FAMRGLSV 293
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
D D + L+SV+ AC L LG+ +H VI G+ + + N+L
Sbjct: 294 D---------------PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSL 338
Query: 284 VDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
MY A+ +F M RKD+VSWT++I G + ++A+ Y M VKP+E
Sbjct: 339 TQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDE 398
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC----LLDLFSRSGHLDEAE 399
+T ++ AC+ +G + G L + IK L Y L++++S+ +D+A
Sbjct: 399 ITVAAVLSACATLGDLDTGVELHK-----LAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 400 NLIRTMPVSPDEPTWAALLSACK 422
++ +P + +W ++++ +
Sbjct: 454 DIFHNIP-RKNVISWTSIIAGLR 475
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 38/319 (11%)
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYT 228
S+SSL A ++ + R G +A +F + +NLF+W L+ G + G +A
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA 288
+ +M G D V+ C + GK+VH V+ GYE + + NAL+ MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
KC D+ +A+ +F M R+D++SW ++I G ++G E L L+ M V P+ +T
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP-- 406
+I AC +G GR + + V G + L ++ +G EAE L M
Sbjct: 303 VISACELLGDRRLGRDI-HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 407 --------------------------------VSPDEPTWAALLSACKHHGNTQMAVRIA 434
V PDE T AA+LSAC G+ V +
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 435 DKLLCLKPEDPSSYILLSN 453
L +K SY++++N
Sbjct: 422 K--LAIKAR-LISYVIVAN 437
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 324/602 (53%), Gaps = 53/602 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLD--AYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K+L + + +G Q + LL+ A G L A+Q+F +P W +++
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFA 79
Query: 84 LANLPHRALSISRSLLHQGF------QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
++ P A S RS+L Q + D S +KACA L + Q+H
Sbjct: 80 GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACAR--ALCSSAMDQLHCQINR 137
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
+ D ++ +TL+D Y+K G +IS Y +L
Sbjct: 138 RGLSADSLLCTTLLDAYSKNG---------------------DLISAY----------KL 166
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
F E P +++ +W ALI+GLV +A + +M EGI ++ V++++ GAC++L
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAAL-GACSHL-- 223
Query: 258 WELGKQVHGLVIGLGYES-CVFISNALVDMYAKCSDLVAAKYIFCEMS-RKDVVSWTSII 315
G G I GY + V +SNA +DMY+KC + A +F + + +K VV+W ++I
Sbjct: 224 ---GDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G A HG+A AL ++D + +KP++V+++ + AC + GLV G ++F +M G+
Sbjct: 281 TGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GV 339
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
+ +++HY C++DL SR+G L EA ++I +M + PD W +LL A + + + +MA +
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASR 399
Query: 436 KLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFY 495
++ + + ++LLSNVYA W++V +VR M K+VKK PG S I+ H FY
Sbjct: 400 EIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFY 459
Query: 496 AGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYG 555
+ SH EI + ++ ++R+ GYV T VLHD+ ++EKE L +HSE+LAVAYG
Sbjct: 460 NSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYG 519
Query: 556 LL---KAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCND 612
L+ A + +R++ NLR+CGDCH V K IS I REI VRD R+H FKDG CSC D
Sbjct: 520 LMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRD 579
Query: 613 FW 614
FW
Sbjct: 580 FW 581
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 46/342 (13%)
Query: 112 TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS 171
T+I+ C + +Q KQ+ +HFL + + ++S L++ A IS
Sbjct: 8 TMIQKCVSF-----SQIKQLQSHFLTAGHFQSSFLRSRLLERCA--------------IS 48
Query: 172 SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVK 231
+S+ A+++FR P W A+I G S + AF +
Sbjct: 49 PFGDLSF---------------AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRS 93
Query: 232 M-----RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDM 286
M I D L S + ACA Q+H + G + + L+D
Sbjct: 94 MLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDA 153
Query: 287 YAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTF 346
Y+K DL++A +F EM +DV SW ++I G +A EA+ LY M + ++ +EVT
Sbjct: 154 YSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTV 213
Query: 347 VGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP 406
V + ACS++G V +G +F D I + +D++S+ G +D+A +
Sbjct: 214 VAALGACSHLGDVKEGENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFT 268
Query: 407 VSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPEDPS 446
TW +++ HG A+ I DKL +KP+D S
Sbjct: 269 GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVS 310
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 282/483 (58%), Gaps = 4/483 (0%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
KK++A II GLSQ ++D K + A +LF+ + + ++ + S++ A
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 86 NLPHRALSISRSLLHQGFQ-PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+L + I + LL + F+ PD F F + K+CA++G ++ GKQVH H
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL--GKQVHGHLCKFGPRFHV 144
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V ++ L+DMY KF VFD + + ISW +++SGYAR G+ +A LF K
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
+ +WTA+ISG G V+A F +M+ GI D + L SV+ +CA L ELGK +
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE-PDEISLISVLPSCAQLGSLELGKWI 263
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H G+ + NAL++MY+KC + A +F +M KDV+SW+++I G A HG A
Sbjct: 264 HLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNA 323
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
A+ +++M A+VKPN +TF+GL+ ACS+VG+ +G F M +DY I+P ++HY C
Sbjct: 324 HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC 383
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
L+D+ +R+G L+ A + +TMP+ PD W +LLS+C+ GN +A+ D L+ L+PED
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPED 443
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMK 504
+Y+LL+N+YA WE+VS++RK++ + +KK PG S I++ F +G+ S P
Sbjct: 444 MGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFW 503
Query: 505 DEI 507
EI
Sbjct: 504 TEI 506
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 172/439 (39%), Gaps = 98/439 (22%)
Query: 21 SPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLS 80
S +L K++H + K G H N L+D Y K L DA ++FD + RD++SW S+LS
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 81 A-CNLANLPH------------------------------RALSISRSLLHQGFQPDHFV 109
L + A+ R + G +PD
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS 169
+++ +CA +G L + GK +H + + V + L++MY+K G+ +F
Sbjct: 244 LISVLPSCAQLGSLEL--GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 170 ISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
+ + ISW+ MISGYA G A+ F E
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR-------------------------- 335
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELG-------KQVHGLVIGLGYESCVFISNA 282
K++ GIT ++ AC+++ +W+ G +Q + + + + C
Sbjct: 336 AKVKPNGITFL------GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC------ 383
Query: 283 LVDMYAKCSDLVAAKYIFCEMSRK-DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP 341
L+D+ A+ L A I M K D W S++ G + AL D +V ++P
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV--ELEP 441
Query: 342 NEV-TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
++ +V L +++G L R M+ + +K + G L E N
Sbjct: 442 EDMGNYVLLANIYADLGKWEDVSRL-RKMIRNENMKK------------TPGGSLIEVNN 488
Query: 401 LIRTMPVSPD--EPTWAAL 417
+++ VS D +P W +
Sbjct: 489 IVQEF-VSGDNSKPFWTEI 506
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 279/505 (55%), Gaps = 19/505 (3%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
+++ IKS LS N +D YGKC L +A ++FD + RD VSW ++++A
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+ L + S+L +PD F F +++KAC G L G ++H+ + S A++ V
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSL--GYGMEIHSSIVKSGMASNSSV 519
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
+L+DMY+K G+ + + ++S G E ++ + +
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMC 568
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
+W ++ISG V DA F +M + GIT D ++V+ CANLA LGKQ+H
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT-PDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
VI +S V+I + LVDMY+KC DL ++ +F + R+D V+W ++I G A HG+ EE
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
A+ L++ M+ +KPN VTF+ ++ AC+++GL+ KG F M DYG+ P L HY+ ++
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK-HHGNTQMAVRIADKLLCLKPEDP 445
D+ +SG + A LIR MP D+ W LL C H N ++A LL L P+D
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 807
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
S+Y LLSNVYA A MWE VS +R+ M ++KKEPG S ++L E HVF G+ +HP +
Sbjct: 808 SAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWE 867
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYV 530
EI + + +EM+ D+S+V
Sbjct: 868 EIYEELGLIYSEMKP---FDDSSFV 889
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 192/378 (50%), Gaps = 36/378 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L ++H +++ G + LLD Y K ++L++F +P ++ VSW+++++ C
Sbjct: 198 LGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
NL AL + + ++++++++CA + L + G Q+HAH L S +A D
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL--GGQLHAHALKSDFAAD 315
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+V++ +DMYAK + +FD+ +LN S+ AMI+GY++ +AL LF
Sbjct: 316 GIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR--- 372
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
L+ SG G D + LS V ACA + G Q
Sbjct: 373 ------------LMSSGLGF-----------------DEISLSGVFRACALVKGLSEGLQ 403
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
++GL I V ++NA +DMY KC L A +F EM R+D VSW +II Q+G+
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
E L L+ M+ +R++P+E TF ++ AC+ G + G + S+V+ G+ +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGC 521
Query: 384 CLLDLFSRSGHLDEAENL 401
L+D++S+ G ++EAE +
Sbjct: 522 SLIDMYSKCGMIEEAEKI 539
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS 169
FS + K CA G L + GKQ HAH ++S + V + L+ +Y VFD
Sbjct: 51 FSFVFKECAKQGALEL--GKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 170 ISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
+ + +SW MI+GY++S +A F P +++ +W +++SG +Q+G + + F
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
V M +EGI D + ++ C+ L LG Q+HG+V+ +G ++ V ++AL+DMYAK
Sbjct: 169 VDMGREGIEF-DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 290 CSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
V + +F + K+ VSW++II G Q+ AL + +M ++ + +
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 350 IYACSNVGLVSKGRALF-RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
+ +C+ + + G L ++ D+ ++ T LD++++ ++ +A+ L
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQDAQILF 339
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 182/386 (47%), Gaps = 46/386 (11%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N +++ Y K + A F+ +P RD+VSW S+LS +++ + + +G +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D F+ ++K C+ + + G Q+H + D V S L+DMYAK
Sbjct: 178 FDGRTFAIILKVCSFLEDTSL--GMQIHGIVVRVGCDTDVVAASALLDMYAK-------- 227
Query: 165 AVFDSISSLNSISWTAMISGYARSGRR-SEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
G+R E+LR+F+ P KN +W+A+I+G VQ+
Sbjct: 228 ------------------------GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
A F +M++ ++ + +SV+ +CA L+ LG Q+H + + + + A
Sbjct: 264 LALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 284 VDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
+DMYAKC ++ A+ +F + S+ ++I G +Q +AL L+ ++S+ + +E
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL----LDLFSRSGHLDEAE 399
++ G+ AC+ V +S+G ++ IK SL C+ +D++ + L EA
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIY-----GLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 400 NLIRTMPVSPDEPTWAALLSACKHHG 425
+ M D +W A+++A + +G
Sbjct: 438 RVFDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 21 SPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLS 80
S L K++HAQ+IK L +TL+D Y KCG L D+ +F+ RD V+W +++
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 81 ACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY 140
A+ + ++ + +P+H F ++++ACA+MG +++G + + + + Y
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGL--IDKGLE-YFYMMKRDY 734
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
D LP Y + M+ +SG+ AL L RE
Sbjct: 735 GLDP-------------QLPHY----------------SNMVDILGKSGKVKRALELIRE 765
Query: 201 SPYK 204
P++
Sbjct: 766 MPFE 769
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 309/597 (51%), Gaps = 45/597 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLD--AYGKCGLLQDALQLFDTLPHRDLVS-WASVLSAC 82
+K+H+ +I +GL H N LL A G L A LFD S W ++
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 83 NLANLP-HRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ ++ P + L +R LL +PD F F+ +K+C + + + ++H + S +
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS--IPKCLEIHGSVIRSGFL 139
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+D +V ++LV Y+ +G A ++F E
Sbjct: 140 DDAIVATSLVRCYSA-------------------------------NGSVEIASKVFDEM 168
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
P ++L +W +I G A + +M EG+ D L +++ +CA+++ +G
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMG 227
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+H + + ESCVF+SNAL+DMYAKC L A +F M ++DV++W S+I+G H
Sbjct: 228 VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH 287
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G EA++ + MV++ V+PN +TF+GL+ CS+ GLV +G F M + + P+++H
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKH 347
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
Y C++DL+ R+G L+ + +I D W LL +CK H N ++ KL+ L+
Sbjct: 348 YGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE 407
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSH 501
+ Y+L++++Y+ A+ + + +RKL+ +++ PG+S I++G + H F + H
Sbjct: 408 AFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMH 467
Query: 502 PMKDEILGLMRKLDAEMRKRGYVPD----TSYVLHDMDQQEKERQLFWHSERLAVAYGLL 557
P I + ++ GY P+ T+ L D + HSE+LA+AYGL+
Sbjct: 468 PESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTS---HSEKLAIAYGLM 524
Query: 558 KAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+ GT +RI KNLRVC DCH+ K +S +REI VRD R+HHF DG CSCND+W
Sbjct: 525 RTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 302/558 (54%), Gaps = 44/558 (7%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
Y+ + LS+ A +K+ + +I+SG P N+L+D YGKC A ++F
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 67 L--PHRDLVSWASVLSACNLAN-----------LPHRA--------------------LS 93
+ R+ V+W S+L A A +P R LS
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 94 ISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDM 153
+ + +L F+PD + FS+L+ AC+ +V G+ VHA L + +++ K++++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACS-ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 154 YAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALI 213
Y K G D +SI L +SW ++I + G +AL +F +P KN+ WT +I
Sbjct: 250 YTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMI 309
Query: 214 SGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGY 273
+G ++G+G A FV+M + G+ +D +V+ AC+ LA+ GK +HG +I G+
Sbjct: 310 TGYGRNGDGEQALRFFVEMMKSGVD-SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGF 368
Query: 274 ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDD 333
+ ++ NALV++YAKC D+ A F +++ KD+VSW +++ HG A++AL LYD+
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDN 428
Query: 334 MVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSG 393
M+++ +KP+ VTF+GL+ CS+ GLV +G +F SMV+DY I + H TC++D+F R G
Sbjct: 429 MIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGG 488
Query: 394 HLDEAENLIRT----MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYI 449
HL EA++L T + S + +W LL AC H +T++ ++ L +P + S++
Sbjct: 489 HLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFV 548
Query: 450 LLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILG 509
LLSN+Y W+ VR+ M+ + +KK PG S I++G + F G++SHP +E+
Sbjct: 549 LLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSE 608
Query: 510 LMRKLDAEMRKRGYVPDT 527
+ L EMR P+T
Sbjct: 609 TLNCLQHEMRN----PET 622
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 202/440 (45%), Gaps = 49/440 (11%)
Query: 53 KCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFST 112
K G + A Q+FD +P D V+W ++L++ + L A+++ L +PD + F+
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI-- 170
++ CA++G +V G+++ + + S + V ++L+DMY K VF +
Sbjct: 76 ILSTCASLG--NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
S N ++W +++ Y + + AL +F E P + FAW +ISG G F
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 231 KMRQEGITIADPLVLSSVVGAC-ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA- 288
+M + D SS++ AC A+ + G+ VH +++ G+ S V N+++ Y
Sbjct: 194 EMLESEFK-PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 289 ------------------------------KCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
K + A +F K++V+WT++I G
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
++G E+AL + +M+ + V + + +++ACS + L+ G+ M+ I
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK-----MIHGCLIHCG 367
Query: 379 LQHY----TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
Q Y L++L+++ G + EA+ + + D +W +L A HG A+++
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 435 DKLLC--LKPEDPSSYILLS 452
D ++ +KP++ + LL+
Sbjct: 427 DNMIASGIKPDNVTFIGLLT 446
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 139/289 (48%), Gaps = 37/289 (12%)
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
T+ I+ A+SGR + A ++F P + AW +++ + G +A F ++R
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
D ++++ CA+L + G+++ LVI G+ + + ++N+L+DMY KCSD ++A
Sbjct: 68 -PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 299 ---------------------------------IFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+F EM ++ +W +I G A G+ E
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACS-NVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
L+L+ +M+ + KP+ TF L+ ACS + V GR + M+++ G +++
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNS 245
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+L +++ G D+A + ++ V + +W +++ AC G T+ A+ +
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLT-QVSWNSIIDACMKIGETEKALEV 293
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 190/583 (32%), Positives = 292/583 (50%), Gaps = 69/583 (11%)
Query: 6 HAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
+ Y S L++ A S + ++H I+KSG + + L+D Y KC ++ A L
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL 285
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ + D+VSW S++ C L ALS+ + + + D F +++ C +
Sbjct: 286 EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSRTE 344
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
+ H + + YA +V + LVDMYAK G+ D
Sbjct: 345 MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMD----------------------- 381
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
AL++F K++ +WTAL++G +G+ +A F MR GIT D +V
Sbjct: 382 --------SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT-PDKIV 432
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS 304
+SV+ A A L + E G+QVHG I G+ S + ++N+LV MY KC L A IF M
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
+D+++WT +IVG A++G L+ +
Sbjct: 493 IRDLITWTCLIVGYAKNG-----------------------------------LLEDAQR 517
Query: 365 LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHH 424
F SM YGI P +HY C++DLF RSG + E L+ M V PD W A+L+A + H
Sbjct: 518 YFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKH 577
Query: 425 GNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSC 484
GN + R A L+ L+P + Y+ LSN+Y+ A + + VR+LM + + KEPG S
Sbjct: 578 GNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSW 637
Query: 485 IDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLF 544
++ + H F + + HP EI + ++ +++ GY D S+ LHD+D++ KE L
Sbjct: 638 VEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLA 697
Query: 545 WHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTI 587
+HSE+LAVA+GLL G IRI+KNLRVCGDCH+ +KL+ T
Sbjct: 698 YHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLLVTF 740
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 199/415 (47%), Gaps = 40/415 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP-HRDLVSWASVLSACNL 84
+++H IK+G N LL Y +C + +A LF+T+ ++ V+W S+L+ +
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+A+ R L +G Q + + F +++ ACA++ V G QVH + S + +
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV--GVQVHCCIVKSGFKTNI 262
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V+S L+DMYAK + RA+ + + + +SW +MI G R G EAL +F
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFG----- 317
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL--GK 262
+M + + I D + S++ C L+ E+
Sbjct: 318 --------------------------RMHERDMKI-DDFTIPSILN-CFALSRTEMKIAS 349
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
H L++ GY + ++NALVDMYAK + +A +F M KDV+SWT+++ G +G
Sbjct: 350 SAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNG 409
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+EAL L+ +M + P+++ ++ A + + L+ G+ + + ++ G SL
Sbjct: 410 SYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS-GFPSSLSVN 468
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
L+ ++++ G L++A + +M + D TW L+ +G + A R D +
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 152/272 (55%), Gaps = 4/272 (1%)
Query: 155 AKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALIS 214
+K G D R +FD + + +W MI Y+ S R S+A +LFR +P KN +W ALIS
Sbjct: 39 SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALIS 98
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYE 274
G +SG+ V+AF F +M+ +GI + L SV+ C +L + G+Q+HG I G++
Sbjct: 99 GYCKSGSKVEAFNLFWEMQSDGIK-PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD 157
Query: 275 SCVFISNALVDMYAKCSDLVAAKYIFCEMS-RKDVVSWTSIIVGTAQHGQAEEALALYDD 333
V + N L+ MYA+C + A+Y+F M K+ V+WTS++ G +Q+G A +A+ + D
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 334 MVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSG 393
+ + N+ TF ++ AC++V G + +V+ G K ++ + L+D++++
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCR 276
Query: 394 HLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
++ A L+ M V D +W +++ C G
Sbjct: 277 EMESARALLEGMEVD-DVVSWNSMIVGCVRQG 307
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 198/394 (50%), Gaps = 44/394 (11%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
NT++ AY L DA +LF + P ++ +SW +++S + A ++ + G +
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
P+ + ++++ C ++ L +G+Q+H H + + + D V + L+ MYA+
Sbjct: 123 PNEYTLGSVLRMCTSLVLLL--RGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 165 AVFDSIS-SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
+F+++ N+++WT+M++GY+++G +A+ FR+ L + GN
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD---------------LRREGNQS 225
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
+ YTF SV+ ACA+++ +G QVH ++ G+++ +++ +AL
Sbjct: 226 NQ-YTF----------------PSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL 268
Query: 284 VDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
+DMYAKC ++ +A+ + M DVVSW S+IVG + G EAL+++ M +K ++
Sbjct: 269 IDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDD 328
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY----TCLLDLFSRSGHLDEAE 399
T ++ N +S+ S +K Y L+D++++ G +D A
Sbjct: 329 FTIPSIL----NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 400 NLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+ M + D +W AL++ H+G+ A+++
Sbjct: 385 KVFEGM-IEKDVISWTALVTGNTHNGSYDEALKL 417
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/465 (35%), Positives = 257/465 (55%), Gaps = 34/465 (7%)
Query: 150 LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAW 209
+++ K G + V + S N I+W MI GY R+ + EAL+ KN+ ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL-----KNMLSF 158
Query: 210 TALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI 269
T + + +S + ACA L K VH L+I
Sbjct: 159 TDIK--------------------------PNKFSFASSLAACARLGDLHHAKWVHSLMI 192
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALA 329
G E +S+ALVD+YAKC D+ ++ +F + R DV W ++I G A HG A EA+
Sbjct: 193 DSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIR 252
Query: 330 LYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
++ +M + V P+ +TF+GL+ CS+ GL+ +G+ F M + I+P L+HY ++DL
Sbjct: 253 VFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLL 312
Query: 390 SRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYI 449
R+G + EA LI +MP+ PD W +LLS+ + + N ++ L K D Y+
Sbjct: 313 GRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGD---YV 369
Query: 450 LLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILG 509
LLSN+Y+ WE+ KVR+LM + ++K G S ++ G H F AG+TSH I
Sbjct: 370 LLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYK 429
Query: 510 LMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVK 569
++ L + + +G+V DT VL D+ ++EKE L +HSE+LA+AY +LK+ PGT IRI K
Sbjct: 430 VLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQK 489
Query: 570 NLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
N+R+C DCH +K +S + +R I +RD R+H F+DG CSC D+W
Sbjct: 490 NIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLH-QGF 103
N ++++ K G A ++ +++++W ++ AL +++L
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+P+ F F++ + ACA +G LH K VH+ + S + ++ S LVD+YAK G
Sbjct: 162 KPNKFSFASSLAACARLGDLH--HAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
R VF S+ + W AMI+G+A G +EA+R+F E
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSE 256
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/513 (34%), Positives = 286/513 (55%), Gaps = 11/513 (2%)
Query: 8 YALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
+ L L S+ R + +K+H +K+GL N+L+ Y G ++ ++FD
Sbjct: 47 FTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDE 106
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANMGPLHV 125
+P RD+VSW ++S+ A+ + + + + + D + + AC+ + L +
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
G++++ F+++ + + + LVDM+ K G D RAVFDS+ N WT+M+ GY
Sbjct: 167 --GERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGY 223
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
+GR EA LF SP K++ WTA+++G VQ +A F M+ GI D VL
Sbjct: 224 VSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR-PDNFVL 282
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
S++ CA E GK +HG + + ALVDMYAKC + A +F E+
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE 342
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
+D SWTS+I G A +G + AL LY +M + V+ + +TFV ++ AC++ G V++GR +
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKI 402
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDE---PTWAALLSACK 422
F SM E + ++P +H +CL+DL R+G LDEAE LI M DE P + +LLSA +
Sbjct: 403 FHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAAR 462
Query: 423 HHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGY 482
++GN ++A R+A+KL ++ D S++ LL++VYA A+ WE+V+ VR+ M ++K PG
Sbjct: 463 NYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGC 522
Query: 483 SCIDLGKESHVFYAGET--SHPMKDEILGLMRK 513
S I++ H F G+ SHP DEI ++ +
Sbjct: 523 SSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 162/373 (43%), Gaps = 67/373 (17%)
Query: 90 RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST 149
+ L++ L QG PD+F ++K+ + V +G++VH + + + D V ++
Sbjct: 29 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK--VIEGEKVHGYAVKAGLEFDSYVSNS 86
Query: 150 LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAW 209
L+ MYA G + VFD + + +SW +IS Y +GR +A+ +F+
Sbjct: 87 LMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFK---------- 136
Query: 210 TALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI 269
+M QE D + S + AC+ L E+G++++ V+
Sbjct: 137 ---------------------RMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV 175
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR------------------------ 305
+E V I NALVDM+ KC L A+ +F M
Sbjct: 176 -TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARV 234
Query: 306 -------KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
KDVV WT+++ G Q + +EAL L+ M +A ++P+ V L+ C+ G
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
+ +G+ + + + + T L+D++++ G ++ A + + D +W +L+
Sbjct: 295 LEQGKWI-HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
Query: 419 SACKHHGNTQMAV 431
+G + A+
Sbjct: 353 YGLAMNGMSGRAL 365
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 263/477 (55%), Gaps = 10/477 (2%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWAS-VLSACNLANLPHRALSISRSLLHQGF 103
N ++ Y K G+L A +FD++P RD+VSW + V+ NL H AL + G
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNL-HEALWFYKEFRRSGI 175
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+ + F F+ L+ AC L +N +Q H L++ + ++ V+ +++D YAK G +
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLN--RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA 233
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
+ FD ++ + WT +ISGYA+ G A +LF E P KN +WTALI+G V+ G+G
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGN 293
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
A F KM G+ + SS + A A++A GK++HG +I + ++L
Sbjct: 294 RALDLFRKMIALGVK-PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352
Query: 284 VDMYAKCSDLVAAKYIF--CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP 341
+DMY+K L A++ +F C+ + D V W ++I AQHG +AL + DDM+ RV+P
Sbjct: 353 IDMYSKSGSLEASERVFRICD-DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 342 NEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL 401
N T V ++ ACS+ GLV +G F SM +GI P +HY CL+DL R+G E
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 402 IRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMW 461
I MP PD+ W A+L C+ HGN ++ + AD+L+ L PE + YILLS++YA W
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKW 531
Query: 462 ENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYA--GETSHPMKDEILGLMRKLDA 516
E V K+R +M + V KE S I++ K+ F G +H K+EI ++ L A
Sbjct: 532 ELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAA 588
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 211/434 (48%), Gaps = 40/434 (9%)
Query: 90 RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST 149
+A+S SL QG + + ++L++ C + L QGK +H H ++ + + + S
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSL--KQGKWIHRHLKITGFKRPNTLLSN 86
Query: 150 -LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFA 208
L+ MY K G P VFD + N SW M+SGY +SG A +F P +++ +
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVS 146
Query: 209 WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLV 268
W ++ G Q GN +A + + + R+ GI + + ++ AC +L +Q HG V
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIKF-NEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 269 IGLGYESCVFISNALVDMYAKC-------------------------------SDLVAAK 297
+ G+ S V +S +++D YAKC D+ AA+
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 298 YIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVG 357
+FCEM K+ VSWT++I G + G AL L+ M++ VKP + TF + A +++
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 358 LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAAL 417
+ G+ + M+ ++P+ + L+D++S+SG L+ +E + R D W +
Sbjct: 326 SLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTM 384
Query: 418 LSACKHHGNTQMAVRIADKLLCLKPE-DPSSYILLSNVYAGASMWENVSKVRKLMMVKE- 475
+SA HG A+R+ D ++ + + + ++ +++ N + + + E + + M V+
Sbjct: 385 ISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHG 444
Query: 476 -VKKEPGYSC-IDL 487
V + Y+C IDL
Sbjct: 445 IVPDQEHYACLIDL 458
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 279/499 (55%), Gaps = 14/499 (2%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+LHA +++G+ + + LL L A +LFD + + ++ A +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPN----LVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG---PLHVNQGKQVHAHFLLSPYAN 142
+ PH ++ + L G +P H F+ + A A+ PL + +H+ F S + +
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRL-----LHSQFFRSGFES 115
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
D +TL+ YAK G R VFD +S + W AMI+GY R G A+ LF P
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
KN+ +WT +ISG Q+GN +A F+ M ++ + + + SV+ ACANL E+G+
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM-SRKDVVSWTSIIVGTAQH 321
++ G G+ +++ NA ++MY+KC + AK +F E+ +++++ SW S+I A H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G+ +EAL L+ M+ KP+ VTFVGL+ AC + G+V KG+ LF+SM E + I P L+H
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
Y C++DL R G L EA +LI+TMP+ PD W LL AC HGN ++A ++ L L+
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS-CIDLGKESHVFYAGETS 500
P +P + +++SN+YA W+ V ++RKLM + + K GYS +++G + H F + S
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS 475
Query: 501 HPMKDEILGLMRKLDAEMR 519
HP EI ++ ++ M+
Sbjct: 476 HPRSYEIYQVLEEIFRRMK 494
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 198/646 (30%), Positives = 315/646 (48%), Gaps = 72/646 (11%)
Query: 7 AYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKC----------- 54
++ L + LSS S L ++LH + I+ GL Q N L+ Y K
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYE 344
Query: 55 --------------------GLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSI 94
G++ A+++F + ++ +++ ++++ +AL +
Sbjct: 345 MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKL 404
Query: 95 SRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMY 154
+L +G + F ++ + AC + V++ Q+H + A + +++ L+DM
Sbjct: 405 FTDMLQRGVELTDFSLTSAVDACGLVSEKKVSE--QIHGFCIKFGTAFNPCIQTALLDMC 462
Query: 155 AKFGLPDYGRAVFDSISSL--NSISWTAMISGYARSGRRSEALRLF-RESPYKNLFAWTA 211
+ +FD S +S + T++I GYAR+G +A+ LF R + LF
Sbjct: 463 TRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL--- 519
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
D + L+ ++ C L E+G Q+H +
Sbjct: 520 -----------------------------DEVSLTLILAVCGTLGFREMGYQIHCYALKA 550
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALY 331
GY S + + N+L+ MYAKC D A IF M DV+SW S+I +EALAL+
Sbjct: 551 GYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALW 610
Query: 332 DDMVSARVKPNEVTFVGLIYAC--SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
M +KP+ +T +I A + +S R LF SM Y I+P+ +HYT + +
Sbjct: 611 SRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVL 670
Query: 390 SRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYI 449
G L+EAE+ I +MPV P+ ALL +C+ H NT +A R+A +L KPE PS YI
Sbjct: 671 GHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYI 730
Query: 450 LLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILG 509
L SN+Y+ + W +R+ M + +K P S I + H F+A +TSHP + +I
Sbjct: 731 LKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYR 790
Query: 510 LMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKA-VPGTIIRIV 568
+ L E K GY P+T YVL ++D+ K+ LF HS +LAV YG+L + G +R++
Sbjct: 791 GLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVM 850
Query: 569 KNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
KN+ +CGDCH K IS + REI +RD+ +HHF +GKCSC D W
Sbjct: 851 KNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 209/435 (48%), Gaps = 14/435 (3%)
Query: 6 HAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGK--CGLLQDALQ 62
+ Y + L++ R S F L ++H I+KSG N+L+ Y K D L+
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 63 LFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLH-QGFQPDHFVFSTLIKACANMG 121
LFD +P RD+ SW +V+S+ H+A + + +GF D F STL+ +C +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 122 PLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAM 181
L +G+++H + + V + L+ Y+KF ++++ + + +++++T M
Sbjct: 300 VLL--RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
I+ Y G A+ +F KN + AL++G ++G+G+ A F M Q G+ + D
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
L+S V AC ++ ++ +Q+HG I G I AL+DM +C + A+ +F
Sbjct: 418 -FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 302 EMSRK--DVVSWTSIIVGTAQHGQAEEALALYD-DMVSARVKPNEVTFVGLIYACSNVGL 358
+ + TSII G A++G ++A++L+ + ++ +EV+ ++ C +G
Sbjct: 477 QWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGF 536
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
G + G + L+ ++++ D+A + TM D +W +L+
Sbjct: 537 REMGYQI-HCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLI 594
Query: 419 SA--CKHHGNTQMAV 431
S + +G+ +A+
Sbjct: 595 SCYILQRNGDEALAL 609
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 203/456 (44%), Gaps = 80/456 (17%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+TK +HA +K + N L+ Y K G ++A+ +F +L +VS+ +++S +
Sbjct: 98 VTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFS 156
Query: 84 LANLPHRALSISRSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
NL AL + + G QP+ + F ++ AC + + G Q+H + S + N
Sbjct: 157 RLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL--GIQIHGLIVKSGFLN 214
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V ++L+ +Y K DS SS + + L+LF E P
Sbjct: 215 SVFVSNSLMSLYDK-----------DSGSSCDDV------------------LKLFDEIP 245
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKM-RQEGITIADPLVLSSVVGACANLAVWELG 261
+++ +W ++S LV+ G AF F +M R EG + D LS+++ +C + +V G
Sbjct: 246 QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV-DSFTLSTLLSSCTDSSVLLRG 304
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLV--------------------------- 294
+++HG I +G + ++NAL+ Y+K D+
Sbjct: 305 RELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSF 364
Query: 295 ----AAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
+A IF ++ K+ +++ +++ G ++G +AL L+ DM+ V+ + + +
Sbjct: 365 GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAV 424
Query: 351 YACSNVGLVSKGRALFRSMVEDYGIK------PSLQHYTCLLDLFSRSGHLDEAENLIRT 404
AC GLVS+ + + + IK P +Q T LLD+ +R + +AE +
Sbjct: 425 DAC---GLVSEKKV--SEQIHGFCIKFGTAFNPCIQ--TALLDMCTRCERMADAEEMFDQ 477
Query: 405 MPVSPD-EPTWAALLSACKHHGNTQMAVRIADKLLC 439
P + D +++ +G AV + + LC
Sbjct: 478 WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLC 513
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 269/482 (55%), Gaps = 9/482 (1%)
Query: 7 AYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
A AL+ ++S A P KK+HA IIK+G LL + KCG L A Q+FD
Sbjct: 38 AGALQEHINSPA---PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDE 94
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV- 125
LP L ++ ++S L L + + + + G + D + S ++KA + G +
Sbjct: 95 LPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMIL 154
Query: 126 --NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMIS 183
+ + VHA + DDV+ + LVD Y K G + R VF+++ N + T+MIS
Sbjct: 155 PRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMIS 214
Query: 184 GYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD-AFYTFVKMRQEGITIADP 242
GY G +A +F + K++ + A++ G +SG + ++ M++ G +
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFH-PNI 273
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
+SV+GAC+ L E+G+QVH ++ G + + + ++L+DMYAKC + A+ +F +
Sbjct: 274 STFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQ 333
Query: 303 MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
M K+V SWTS+I G ++G EEAL L+ M R++PN VTF+G + ACS+ GLV KG
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK 422
+F SM DY +KP ++HY C++DL R+G L++A R MP PD WAALLS+C
Sbjct: 394 YEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCN 453
Query: 423 HHGNTQMAVRIADKLLCLKPED-PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG 481
HGN ++A A +L L + P +Y+ LSNVYA W+NVSK+R++M + + K G
Sbjct: 454 LHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIG 513
Query: 482 YS 483
S
Sbjct: 514 RS 515
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+F +T++ ++ S + Y+ ++Q +++ ++ + N + GK++H
Sbjct: 3 IFRFTSISPRILPSNH-----YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIH 57
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+I G++ + IS L+ ++ KC L A+ +F E+ + + ++ +I G +HG +
Sbjct: 58 ADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVK 117
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVG-LVSKGRALFRSMVEDYGIKPSLQ---- 380
E L L M + K + T ++ A ++ G + R+L R +V IK ++
Sbjct: 118 ELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR-LVHARIIKCDVELDDV 176
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTM 405
T L+D + +SG L+ A + TM
Sbjct: 177 LITALVDTYVKSGKLESARTVFETM 201
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 282/540 (52%), Gaps = 40/540 (7%)
Query: 7 AYALKSQLSSVAR-QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
A S L SV++ ++ K++H I++ +S + L+DAY KC + A +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV 125
D+V + +++S L +L + R L+ P+ +++ + L +
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL--LAL 457
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
G+++H + + N + ++DMYAK
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAK----------------------------- 488
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
GR + A +F +++ +W ++I+ QS N A F +M GI D + +
Sbjct: 489 --CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSI 545
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
S+ + ACANL GK +HG +I S V+ + L+DMYAKC +L AA +F M
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRA 364
K++VSW SII HG+ +++L L+ +MV + ++P+++TF+ +I +C +VG V +G
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 365 LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHH 424
FRSM EDYGI+P +HY C++DLF R+G L EA +++MP PD W LL AC+ H
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 425 GNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSC 484
N ++A + KL+ L P + Y+L+SN +A A WE+V+KVR LM +EV+K PGYS
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 485 IDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLF 544
I++ K +H+F +G+ +HP I L+ L E+R GY+P LH E R+++
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH----PESSRKVY 841
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 200/405 (49%), Gaps = 36/405 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +LH ++ SG+ N+LL Y KCG DA +LF + D V+W ++S
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ L +L+ ++ G PD FS+L+ + + L KQ+H + + + D
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE--YCKQIHCYIMRHSISLD 374
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ S L+D Y K + +F +S++ + +TAMISGY +G ++L +FR
Sbjct: 375 IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR---- 430
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
W LV+ VK+ IT L S++ L +LG++
Sbjct: 431 -----W------LVK-----------VKISPNEIT------LVSILPVIGILLALKLGRE 462
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+HG +I G+++ I A++DMYAKC + A IF +S++D+VSW S+I AQ
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
A+ ++ M + + + V+ + AC+N+ S G+A+ M++ + + + +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSES 581
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
L+D++++ G+L A N+ +TM + +W ++++AC +HG +
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 185/401 (46%), Gaps = 42/401 (10%)
Query: 36 GLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA---CNLANLPHRAL 92
G+ +E ++L+ AY + G + +LFD + +D V W +L+ C + +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 93 SISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVD 152
S+ R P+ F ++ CA+ L ++ G Q+H ++S + +K++L+
Sbjct: 228 SVMR---MDQISPNAVTFDCVLSVCAS--KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS 282
Query: 153 MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTAL 212
MY+K G D +F +S ++++W MISGY +SG E+L F E
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE------------ 330
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
++ SG + D + SS++ + + E KQ+H ++
Sbjct: 331 ---MISSG-----------------VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
+F+++AL+D Y KC + A+ IF + + DVV +T++I G +G ++L ++
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
+V ++ PNE+T V ++ + + GR L +++ G ++D++++
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKC 489
Query: 393 GHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
G ++ A + + D +W ++++ C N A+ I
Sbjct: 490 GRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDI 529
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 184/403 (45%), Gaps = 40/403 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR--DLVSWASVLSACN 83
K++HA +I + +S +L Y CG D ++F L R + W S++S+
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFV 114
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN- 142
L ++AL+ +L G PD F L+KAC + +G + + S +
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF---KGIDFLSDTVSSLGMDC 171
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
++ V S+L+ Y ++G D +FD + + + W M++GYA+ G
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG------------- 218
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
A ++I G F MR + I+ + + V+ CA+ + +LG
Sbjct: 219 -----ALDSVIKG-------------FSVMRMDQIS-PNAVTFDCVLSVCASKLLIDLGV 259
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
Q+HGLV+ G + I N+L+ MY+KC A +F MSR D V+W +I G Q G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
EE+L + +M+S+ V P+ +TF L+ + S + + + + + I +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI-HCYIMRHSISLDIFLT 378
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
+ L+D + + + A+N I + S D + A++S H+G
Sbjct: 379 SALIDAYFKCRGVSMAQN-IFSQCNSVDVVVFTAMISGYLHNG 420
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 46/369 (12%)
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG-LPDYGRAVFD 168
S L++AC+N P + QGKQVHA +++ + D ++ MYA G D G+ +
Sbjct: 38 LSLLLQACSN--PNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 169 SISSLNSI-SWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFY 227
+SI W ++IS + R+G ++AL AFY
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQAL-----------------------------AFY 126
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
KM G++ D +V AC L ++ + V LG + F++++L+ Y
Sbjct: 127 --FKMLCFGVS-PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAY 183
Query: 288 AKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFV 347
+ + +F + +KD V W ++ G A+ G + + + M ++ PN VTF
Sbjct: 184 LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFD 243
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV 407
++ C++ L+ G L +V G+ LL ++S+ G D+A L R M
Sbjct: 244 CVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS- 301
Query: 408 SPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKV 467
D TW ++S G + ++ +++ S +L + +S+ +VSK
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEMI--------SSGVLPDAITFSSLLPSVSKF 353
Query: 468 RKLMMVKEV 476
L K++
Sbjct: 354 ENLEYCKQI 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF- 300
P LS ++ AC+N + GKQVH +I + ++ MYA C +F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 301 -CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYAC------ 353
++ R + W SII ++G +ALA Y M+ V P+ TF L+ AC
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 354 ----------SNVGL--------------VSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
S++G+ + G+ S + D ++ + +L+ +
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 390 SRSGHLD---EAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
++ G LD + +++R +SP+ T+ +LS C + V++ L+ + D
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFE 273
Query: 447 SYIL--LSNVYAGASMWENVSKVRKLM 471
I L ++Y+ +++ SK+ ++M
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMM 300
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 275/510 (53%), Gaps = 36/510 (7%)
Query: 23 FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
+TK +HA I SG + N L+ +Y KCG +FD + HR++++ +V+S
Sbjct: 172 LVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 83 NLANLPHRALSISRSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
L L + SL+ +G P+ + + + AC+ G + +G+Q+HA
Sbjct: 232 IENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACS--GSQRIVEGQQIHALLWKYGIE 288
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
++ ++S L+DMY+K G + +F+S + ++ +S T ++ G A++G EA++
Sbjct: 289 SELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQF---- 344
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
F++M Q G+ I D V+S+V+G LG
Sbjct: 345 ---------------------------FIRMLQAGVEI-DANVVSAVLGVSFIDNSLGLG 376
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
KQ+H LVI + F++N L++MY+KC DL ++ +F M +++ VSW S+I A+H
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G AL LY++M + VKP +VTF+ L++ACS+VGL+ KGR L M E +GI+P +H
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH 496
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
YTC++D+ R+G L EA++ I ++P+ PD W ALL AC HG+T++ A++L
Sbjct: 497 YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA 556
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSH 501
P+ S++IL++N+Y+ W+ +K K M V KE G S I++ ++H F + H
Sbjct: 557 PDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLH 616
Query: 502 PMKDEILGLMRKLDAEMRKRGYVPDTSYVL 531
P + I ++ L M GY PD ++L
Sbjct: 617 PQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 229/485 (47%), Gaps = 66/485 (13%)
Query: 22 PFLTKKLHAQIIKSGLSQHEPFP-----------NTLLDAYGKCGLLQDALQLFDTLPHR 70
P L LHA IIK+ EP N+LL Y KCG L DA++LFD +P R
Sbjct: 61 PHLGPCLHASIIKNP-EFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMR 119
Query: 71 DLVSWASVLSACNLANLPHRA--LSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
D++S V L N + + + R L GF DH + ++ C P
Sbjct: 120 DVISQNIVFYGF-LRNRETESGFVLLKRMLGSGGF--DHATLTIVLSVCDT--PEFCLVT 174
Query: 129 KQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS 188
K +HA +LS Y + V + L+ Y K G GR VFD +S N I+ TA+ISG +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 189 GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSV 248
+ LRLF + + G+ + + S
Sbjct: 235 ELHEDGLRLF--------------------------------SLMRRGLVHPNSVTYLSA 262
Query: 249 VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV 308
+ AC+ G+Q+H L+ G ES + I +AL+DMY+KC + A IF + D
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE 322
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVK--PNEVTFV-GLIYACSNVGLVSKGRAL 365
VS T I+VG AQ+G EEA+ + M+ A V+ N V+ V G+ + +++GL G+ L
Sbjct: 323 VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL---GKQL 379
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
S+V + L++++S+ G L +++ + R MP + +W ++++A HG
Sbjct: 380 -HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHG 437
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLM-MVKEVKK-EPG-- 481
+ A+++ +++ L+ + P+ LS ++A S + K R+L+ +KEV EP
Sbjct: 438 HGLAALKLYEEMTTLEVK-PTDVTFLSLLHA-CSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 482 -YSCI 485
Y+CI
Sbjct: 496 HYTCI 500
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/601 (29%), Positives = 301/601 (50%), Gaps = 49/601 (8%)
Query: 21 SPFLTKKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
SP + K++H ++S + + T +LD Y K G + A ++F+ + R++V+W +V+
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW-NVM 304
Query: 80 SACNLAN--LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
C N + L + G QPD L+ A A + +G+ +H + +
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA------ILEGRTIHGYAMR 358
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
+ V+++ L+DMY + G +FD ++
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE------------------------- 393
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
KN+ +W ++I+ VQ+G A F ++ + + D ++S++ A A
Sbjct: 394 ------KNVISWNSIIAAYVQNGKNYSALELFQELWDSSL-VPDSTTIASILPAYAESLS 446
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
G+++H ++ Y S I N+LV MYA C DL A+ F + KDVVSW SII+
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 318 TAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
A HG ++ L+ +M+++RV PN+ TF L+ ACS G+V +G F SM +YGI P
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 566
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
++HY C+LDL R+G+ A+ + MP P W +LL+A ++H + +A A+++
Sbjct: 567 GIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 626
Query: 438 LCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAG 497
++ ++ Y+LL N+YA A WE+V++++ LM K + + S ++ +SHVF G
Sbjct: 627 FKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNG 686
Query: 498 ETSHPMKDEILGLMRKLDAEMRKRG----YVPDTSYVLHDMDQQEKERQLFWHSERLAVA 553
+ SH ++I + LD R G YV S + + + + HS RLA
Sbjct: 687 DRSHVATNKIYEV---LDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATC 743
Query: 554 YGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDF 613
+GL+ G + + N R+C CH L+ S + REI V D+K +HHF +G+CSC ++
Sbjct: 744 FGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNY 803
Query: 614 W 614
W
Sbjct: 804 W 804
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 203/418 (48%), Gaps = 48/418 (11%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
KK+HA +IK G N+L+ Y K G DA ++F+ +P RD+VSW S++S
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+L + + +L GF+PD F + + AC+++ GK++H H + S DV
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV--YSPKMGKEIHCHAVRSRIETGDV 267
Query: 146 -VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V ++++DMY+K+G Y +F+ + N ++W MI YAR+GR +
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT------------ 315
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
DAF F KM ++ D + +++ A A L G+ +
Sbjct: 316 -------------------DAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTI 352
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
HG + G+ + + AL+DMY +C L +A+ IF M+ K+V+SW SII Q+G+
Sbjct: 353 HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
AL L+ ++ + + P+ T ++ A + +S+GR + Y +K T
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE-----IHAYIVKSRYWSNTI 467
Query: 385 LLD----LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+L+ +++ G L++A + + D +W +++ A HG +++V + +++
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILL-KDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 185/401 (46%), Gaps = 44/401 (10%)
Query: 40 HEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLL 99
++P L + L++DALQLFD + D W ++ L A+ ++
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
G + D F + +IK+ A + L +GK++HA + + +D V ++L+ +Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLE--EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 160 PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS 219
VF+ + + +SW +MISGY G +L LF+E +++
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKE---------------MLKC 225
Query: 220 GNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC-VF 278
G D F T S +GAC+++ ++GK++H + E+ V
Sbjct: 226 GFKPDRFSTM-----------------SALGACSHVYSPKMGKEIHCHAVRSRIETGDVM 268
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
+ +++DMY+K ++ A+ IF M ++++V+W +I A++G+ +A + M
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 339 -VKPNEVTFVGLIYACSNV-GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
++P+ +T + L+ A + + G G A+ R G P + T L+D++ G L
Sbjct: 329 GLQPDVITSINLLPASAILEGRTIHGYAMRR------GFLPHMVLETALIDMYGECGQLK 382
Query: 397 EAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
AE + M + +W ++++A +G A+ + +L
Sbjct: 383 SAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 8/278 (2%)
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
R + +N + T + G+A S +AL+LF E + F W +I G G +
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
+A + +M G+ AD V+ + A ++ E GK++H +VI LG+ S V++ N+L
Sbjct: 113 EAVQFYSRMVFAGVK-ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSL 171
Query: 284 VDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
+ +Y K A+ +F EM +D+VSW S+I G G +L L+ +M+ KP+
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
+ + + ACS+V G+ + V + T +LD++S+ G + AE +
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
M + + W ++ +G R+ D LC +
Sbjct: 292 GM-IQRNIVAWNVMIGCYARNG------RVTDAFLCFQ 322
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/634 (30%), Positives = 325/634 (51%), Gaps = 61/634 (9%)
Query: 2 SLSRHAYALKSQLSSV---ARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKC---G 55
S+ H + + LSSV R P K++H +K GL N ++ YG+C
Sbjct: 152 SMLSHCFPNEFTLSSVLTSCRYEP--GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 56 LLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIK 115
+A +F+ + ++LV+W S+++A NL +A+ + + G D +TL+
Sbjct: 210 AAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR---ATLLN 266
Query: 116 ACA------NMGPLHVNQG-KQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFD 168
C+ ++ P V++ Q+H+ + S V + L+ +Y++ L DY
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM-LEDY------ 319
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFRE-SPYKNLFAWTALISGLVQSGNGVDAFY 227
++ +LF E S +++ AW +I+ + A +
Sbjct: 320 -----------------------TDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIH 355
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
F ++RQE ++ D SSV+ ACA L +H VI G+ + ++N+L+ Y
Sbjct: 356 LFGQLRQEKLS-PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414
Query: 288 AKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFV 347
AKC L +F +M +DVVSW S++ + HGQ + L ++ M + P+ TF+
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFI 471
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV 407
L+ ACS+ G V +G +FRSM E P L HY C++D+ SR+ EAE +I+ MP+
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531
Query: 408 SPDEPTWAALLSACKHHGNTQMAVRIADKLLCL-KPEDPSSYILLSNVYAGASMWENVSK 466
PD W ALL +C+ HGNT++ ADKL L +P + SYI +SN+Y + +
Sbjct: 532 DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANL 591
Query: 467 VRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPD 526
K M V+KEP S ++G + H F +G P K+ + +++L + +++ GYVP+
Sbjct: 592 SIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPE 651
Query: 527 T-SYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT-----IIRIVKNLRVCGDCHTV 580
S D++++E L HSE+LA+A+ +++ + +I+I+KN R+C DCH
Sbjct: 652 MRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNF 711
Query: 581 LKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
+KL S + +EI +RD+ R+HHFKD CSCND+W
Sbjct: 712 MKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 190/445 (42%), Gaps = 78/445 (17%)
Query: 38 SQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRS 97
SQ+ N L++ Y KCG + A Q+FDT+P R++VSW ++++ A + S
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF 157
+L F P+ F S+++ +C GKQVH L V + ++ MY
Sbjct: 153 MLSHCF-PNEFTLSSVLTSC------RYEPGKQVHGLALKLGLHCSIYVANAVISMY--- 202
Query: 158 GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLV 217
G G A ++ +WT +F +KNL W ++I+
Sbjct: 203 GRCHDGAAAYE--------AWT-----------------VFEAIKFKNLVTWNSMIAAFQ 237
Query: 218 QSGNGVDAFYTFVKMRQEGITI--ADPLVLSSVVGACANLAVWELGK---QVHGLVIGLG 272
G A F++M +G+ A L + S + ++L E+ K Q+H L + G
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG 297
Query: 273 YESCVFISNALVDMYAK-CSDLVAAKYIFCEMSR-KDVVSWTSIIVGTAQHGQAEEALAL 330
+ ++ AL+ +Y++ D +F EMS +D+V+W II A + E A+ L
Sbjct: 298 LVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHL 356
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF-----------------RSMVEDY 373
+ + ++ P+ TF ++ AC+ GLV+ AL S++ Y
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACA--GLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414
Query: 374 GIKPSLQ---------------HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
SL + +L +S G +D + + M ++PD T+ ALL
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALL 474
Query: 419 SACKHHGNTQMAVRIADKLLCLKPE 443
SAC H G + +RI + KPE
Sbjct: 475 SACSHAGRVEEGLRIFRSMF-EKPE 498
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 143/322 (44%), Gaps = 50/322 (15%)
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPY--ANDDVVKSTLVDMYAKFGLPDYGRAVF 167
++ L +ACA L G +H H L PY + + ++ + L++MYAK G Y R VF
Sbjct: 62 YAALFQACAEQRNLL--DGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 168 DSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFY 227
D++ N +SWTA+I+GY VQ+GN + F
Sbjct: 120 DTMPERNVVSWTALITGY-------------------------------VQAGNEQEGFC 148
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
F M + LSSV+ +C +E GKQVHGL + LG ++++NA++ MY
Sbjct: 149 LFSSMLSH--CFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMY 202
Query: 288 AKCSDLVAAK---YIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
+C D AA +F + K++V+W S+I ++A+ ++ M S V +
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRA 262
Query: 345 TFVGL---IYACSNV--GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS-GHLDEA 398
T + + +Y S++ VSK S+ G+ + T L+ ++S +
Sbjct: 263 TLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC 322
Query: 399 ENLIRTMPVSPDEPTWAALLSA 420
L M D W +++A
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITA 344
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/639 (29%), Positives = 319/639 (49%), Gaps = 63/639 (9%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAY---GKCGLLQDALQLFDTLP-HRDLVSWASVLSAC 82
+L ++ K G+S N L+ Y GKC D +Q +T D+ +W +++S
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ ++AL + R + G P+ + + AC+ + +NQG +VH+ + + +
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV--INQGSEVHSIAVKMGFID 385
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----------------------------- 173
D +V ++LVDMY+K G + R VFDS+ +
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 174 ------NSISWTAMISGYARSGRRSEALRLFRESP-----YKNLFAWTALISGLVQSGNG 222
N I+W MISGY ++G EA+ LF+ +N W +I+G +Q+G
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 223 VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNA 282
+A F KM Q + + + + S++ ACANL ++ +++HG V+ ++ + NA
Sbjct: 506 DEALELFRKM-QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA 564
Query: 283 LVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPN 342
L D YAK D+ ++ IF M KD+++W S+I G HG ALAL++ M + + PN
Sbjct: 565 LTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPN 624
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
T +I A +G V +G+ +F S+ DY I P+L+H + ++ L+ R+ L+EA I
Sbjct: 625 RGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFI 684
Query: 403 RTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYA-----G 457
+ M + + P W + L+ C+ HG+ MA+ A+ L L+PE+ ++ ++S +YA G
Sbjct: 685 QEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLG 744
Query: 458 ASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAE 517
S+ N + L+ KK G S I++ H F G+ S D + L+ K+
Sbjct: 745 RSLEGNKPRRDNLL-----KKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRL 799
Query: 518 MRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKA--VPGTIIRIVKNLRVCG 575
+ ++ +++ +E HSE+ A+A+GL+ + T IRI+KNLR+C
Sbjct: 800 DNRSDQYNGELWI----EEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCR 855
Query: 576 DCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
DCH K +S +I + D + HHFK+G CSC D+W
Sbjct: 856 DCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 229/475 (48%), Gaps = 51/475 (10%)
Query: 3 LSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSGL-SQHEPFPNT-LLDAYGKCGLLQDA 60
+ R Y LK S + S L + LHA+ GL ++ + F T LL Y KCG + DA
Sbjct: 79 VKRSTY-LKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETKLLSMYAKCGCIADA 134
Query: 61 LQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
++FD++ R+L +W++++ A + N + R ++ G PD F+F +++ CAN
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 121 GPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTA 180
G V GK +H+ + ++ V ++++ +YAK G D+ F + + I+W +
Sbjct: 195 G--DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 181 MISGYARSGRRSEALRLFRE------SP-----------YKNL----------------- 206
++ Y ++G+ EA+ L +E SP Y L
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 207 -----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
F WTA+ISGL+ +G A F KM G+ + + + + S V AC+ L V G
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV-VPNAVTIMSAVSACSCLKVINQG 371
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+VH + + +G+ V + N+LVDMY+KC L A+ +F + KDV +W S+I G Q
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G +A L+ M A ++PN +T+ +I G + LF+ M +D ++ +
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKHHGNTQMAVRI 433
+ ++ + ++G DEA L R M S P+ T +LL AC + +M I
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREI 546
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 39/328 (11%)
Query: 97 SLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK 156
SL QG + + L+++C + G +H+ G+ +HA F L
Sbjct: 71 SLFQQGSKVKRSTYLKLLESCIDSGSIHL--GRILHARFGL------------------- 109
Query: 157 FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGL 216
F PD VF T ++S YA+ G ++A ++F +NLF W+A+I
Sbjct: 110 FTEPD----VFVE---------TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
+ + F M ++G+ + D + ++ CAN E GK +H +VI LG SC
Sbjct: 157 SRENRWREVAKLFRLMMKDGV-LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC 215
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS 336
+ +SN+++ +YAKC +L A F M +DV++W S+++ Q+G+ EEA+ L +M
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 337 ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
+ P VT+ LI + +G L + M E +GI + +T ++ +G
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRY 334
Query: 397 EAENLIRTM---PVSPDEPTWAALLSAC 421
+A ++ R M V P+ T + +SAC
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSAC 362
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 279/508 (54%), Gaps = 3/508 (0%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
KKLH ++K GL + N L+ Y CGL+ A +FD D+ SW ++S N
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
++ + + P ++ AC+ + + K+VH +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL--CKRVHEYVSECKTEPSLR 272
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+++ LV+ YA G D +F S+ + + ISWT+++ GY G A F + P ++
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+WT +I G +++G ++ F +M+ G+ I D + SV+ ACA+L E+G+ +
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREMQSAGM-IPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+ ++ V + NAL+DMY KC A+ +F +M ++D +WT+++VG A +GQ +
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EA+ ++ M ++P+++T++G++ AC++ G+V + R F M D+ I+PSL HY C+
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDP 445
+D+ R+G + EA ++R MP++P+ W ALL A + H + MA A K+L L+P++
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
+ Y LL N+YAG W+++ +VR+ ++ +KK PG+S I++ +H F AG+ SH +
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYVLHD 533
EI + +L E Y+PDTS +L +
Sbjct: 632 EIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 208/462 (45%), Gaps = 70/462 (15%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGK--CGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K+LH+Q I G++ + F L + G + A +LF +P D+V W +++ +
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ + + ++L +G PD F L+ G + GK++H H + ++
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG-ALACGKKLHCHVVKFGLGSN 169
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V++ LV MY+ GL D R VFD + SW MISGY R E++ L E
Sbjct: 170 LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME- 228
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+NL + T+ + L V+ AC+ + +L K+
Sbjct: 229 RNLVSPTS-------------------------------VTLLLVLSACSKVKDKDLCKR 257
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VH V E + + NALV+ YA C ++ A IF M +DV+SWTSI+ G + G
Sbjct: 258 VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGN 317
Query: 324 AE-------------------------------EALALYDDMVSARVKPNEVTFVGLIYA 352
+ E+L ++ +M SA + P+E T V ++ A
Sbjct: 318 LKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTA 377
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEP 412
C+++G + G + ++ ++ IK + L+D++ + G ++A+ + M D+
Sbjct: 378 CAHLGSLEIGEWI-KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKF 435
Query: 413 TWAALLSACKHHGNTQMAVRIADKL--LCLKPEDPSSYILLS 452
TW A++ ++G Q A+++ ++ + ++P+D + +LS
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 203/470 (43%), Gaps = 72/470 (15%)
Query: 92 LSISRSLLH----QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
LSI ++LL + D+ F +++ C +Q KQ+H+ + A +
Sbjct: 15 LSIFKALLMSTITESISNDYSRFISILGVCKT-----TDQFKQLHSQSITRGVAPN---- 65
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
P + + +F + W + + G+ S A +LF + P ++
Sbjct: 66 ------------PTFQKKLF--------VFWCSRLGGHV-----SYAYKLFVKIPEPDVV 100
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD---PLVLSSVVGACANLAVWELGKQV 264
W +I G + + ++ M +EG+T P +L+ + LA GK++
Sbjct: 101 VWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC---GKKL 157
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H V+ G S +++ NALV MY+ C + A+ +F ++DV SW +I G + +
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM---VEDYGIKPSLQH 381
EE++ L +M V P VT + ++ ACS V K + L + + V + +PSL+
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKV----KDKDLCKRVHEYVSECKTEPSLRL 273
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
L++ ++ G +D A + R+M + D +W +++ GN ++A D+ +
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNLKLARTYFDQ---MP 329
Query: 442 PEDPSSYILLSNVYAGASMW-ENVSKVRKLMMVKEVKKEPGY-----SCIDLGKESHVFY 495
D S+ ++ + Y A + E++ R++ + E +C LG
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS----LE 385
Query: 496 AGE------TSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEK 539
GE + +K++++ +D K G V HDMDQ++K
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYF-KCGCSEKAQKVFHDMDQRDK 434
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 37/247 (14%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASV----- 78
L K++H + + N L++AY CG + A+++F ++ RD++SW S+
Sbjct: 254 LCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYV 313
Query: 79 ------LSACNLANLPHR--------------------ALSISRSLLHQGFQPDHFVFST 112
L+ +P R +L I R + G PD F +
Sbjct: 314 ERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVS 373
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
++ ACA++G L + G+ + + + ND VV + L+DMY K G + + VF +
Sbjct: 374 VLTACAHLGSLEI--GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRE----SPYKNLFAWTALISGLVQSGNGVDAFYT 228
+ +WTAM+ G A +G+ EA+++F + S + + ++S SG A
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKF 491
Query: 229 FVKMRQE 235
F KMR +
Sbjct: 492 FAKMRSD 498
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 261/475 (54%), Gaps = 3/475 (0%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N + + CG +++A ++FD P RDLVSW +++ +A+ + + + +G +
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD L+ +C+ +G L N+GK+ + + + + + L+DM++K G R
Sbjct: 255 PDDVTMIGLVSSCSMLGDL--NRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEAR 312
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
+FD++ +SWT MISGYAR G + +LF + K++ W A+I G VQ+ G D
Sbjct: 313 RIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD 372
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A F +M Q T D + + + AC+ L ++G +H + V + +LV
Sbjct: 373 ALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
DMYAKC ++ A +F + ++ +++T+II G A HG A A++ +++M+ A + P+E+
Sbjct: 432 DMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
TF+GL+ AC + G++ GR F M + + P L+HY+ ++DL R+G L+EA+ L+ +
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
MP+ D W ALL C+ HGN ++ + A KLL L P D Y+LL +Y A+MWE+
Sbjct: 552 MPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDA 611
Query: 465 SKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMR 519
+ R++M + V+K PG S I++ F + S P ++I + L MR
Sbjct: 612 KRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 228/470 (48%), Gaps = 38/470 (8%)
Query: 4 SRHAYALKSQLSSVARQSPFLT--KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGL----- 56
S H++ L + L S+ + L K++ AQ+I +GL +PF ++ L A+ C L
Sbjct: 46 STHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLIL-DPFASSRLIAF--CALSESRY 102
Query: 57 LQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGF---QPDHFVFSTL 113
L ++++ + + ++ SW + + + P + + + +L G +PDHF + L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 114 IKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL 173
K CA++ + G + H L V + + M+A G + R VFD
Sbjct: 163 FKVCADLRLSSL--GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR 220
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSG------NGVDAFY 227
+ +SW +I+GY + G +A+ +++ + + + GLV S N FY
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 228 TFVKMRQEGITIADPLV--LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFIS-NALV 284
+VK + G+ + PLV L + C + + E + L E +S ++
Sbjct: 281 EYVK--ENGLRMTIPLVNALMDMFSKCGD--IHEARRIFDNL------EKRTIVSWTTMI 330
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
YA+C L ++ +F +M KDVV W ++I G+ Q + ++ALAL+ +M ++ KP+E+
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEI 390
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
T + + ACS +G + G + R +E Y + ++ T L+D++++ G++ EA ++
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHR-YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLS 452
+ + + T+ A++ HG+ A+ ++++ + P++ + LLS
Sbjct: 450 IQ-TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 31/315 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+ + + ++GL P N L+D + KCG + +A ++FD L R +VSW +++S
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN--- 142
L L +SR L + D +++ +I G + +G+ A F +N
Sbjct: 337 GL----LDVSRKLFDDMEEKDVVLWNAMIG-----GSVQAKRGQDALALFQEMQTSNTKP 387
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALRLF 198
D++ + ++ G D G + I SLN T+++ YA+ G SEAL +F
Sbjct: 388 DEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Query: 199 RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
+N +TA+I GL G+ A F +M GI D + ++ AC + +
Sbjct: 448 HGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA-PDEITFIGLLSACCHGGMI 506
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR--------KDVVS 310
+ G+ + F N + Y+ DL+ + E R D
Sbjct: 507 QTGRDYFSQM------KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 560
Query: 311 WTSIIVGTAQHGQAE 325
W +++ G HG E
Sbjct: 561 WGALLFGCRMHGNVE 575
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 256/457 (56%), Gaps = 3/457 (0%)
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
VSW S ++ A + G +P+H F L+ C + G +H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 133 AHFL-LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRR 191
+ L N +V + ++ MY+K G R VFD + NS++W MI GY RSG+
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 192 SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA 251
A ++F + P ++L +WTA+I+G V+ G +A F +M+ G+ D + + + + A
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK-PDYVAIIAALNA 215
Query: 252 CANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSW 311
C NL G VH V+ +++ V +SN+L+D+Y +C + A+ +F M ++ VVSW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
S+IVG A +G A E+L + M KP+ VTF G + ACS+VGLV +G F+ M
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNT-QMA 430
DY I P ++HY CL+DL+SR+G L++A L+++MP+ P+E +LL+AC +HGN +A
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 431 VRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKE 490
R+ L L + S+Y++LSN+YA WE SK+R+ M +KK+PG+S I++
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Query: 491 SHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDT 527
HVF AG+ +H I ++ + +++R +G V +T
Sbjct: 456 MHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 158/363 (43%), Gaps = 72/363 (19%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
NT++D Y + G + +A ++FD +P RDL+SW ++++ AL R + G +
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD+ + AC N+G L G VH + L + N+ V ++L+D+Y + G ++ R
Sbjct: 204 PDYVAIIAALNACTNLGALSF--GLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
VF ++ +SW ++I G+A +G E+L FR
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR------------------------- 296
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
KM+++G D + + + AC+++ + E G + ++ C + + +
Sbjct: 297 ------KMQEKGFK-PDAVTFTGALTACSHVGLVEEGLRYFQIM------KCDYRISPRI 343
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
+ Y DL ++ G+ E+AL L M +KPNEV
Sbjct: 344 EHYGCLVDLY------------------------SRAGRLEDALKLVQSM---PMKPNEV 376
Query: 345 TFVGLIYACSNVG--LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
L+ ACSN G +V R + + D +K S +Y L ++++ G + A +
Sbjct: 377 VIGSLLAACSNHGNNIVLAERLM--KHLTDLNVK-SHSNYVILSNMYAADGKWEGASKMR 433
Query: 403 RTM 405
R M
Sbjct: 434 RKM 436
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 152/347 (43%), Gaps = 49/347 (14%)
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAF 226
+S ++SWT+ I+ R+GR +EA + F + N + AL+SG +G +A
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 227 YTFVKMR--QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
+ + G+ +V ++++G + ++ + LV + N ++
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKAR----LVFDYMEDKNSVTWNTMI 147
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
D Y + + A +F +M +D++SWT++I G + G EEAL + +M + VKP+ V
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMV-EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
+ + AC+N+G +S G + R ++ +D+ K +++ L+DL+ R G ++ A +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDF--KNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 404 TMP----------------------------------VSPDEPTWAALLSACKHHGNTQM 429
M PD T+ L+AC H G +
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 430 AVRIADKLLCLKPEDP--SSYILLSNVYAGASMWENVSKVRKLMMVK 474
+R + C P Y L ++Y+ A E+ K+ + M +K
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 41/201 (20%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H ++ + N+L+D Y +CG ++ A Q+F + R +VSW SV+
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG----KQVHAHFLLSPYAND 143
H +L R + +GF+PD F+ + AC+++G V +G + + + +SP
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL--VEEGLRYFQIMKCDYRISPR--- 342
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ YG ++ Y+R+GR +AL+L + P
Sbjct: 343 ---------------IEHYG----------------CLVDLYSRAGRLEDALKLVQSMPM 371
Query: 204 K-NLFAWTALISGLVQSGNGV 223
K N +L++ GN +
Sbjct: 372 KPNEVVIGSLLAACSNHGNNI 392
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 24/199 (12%)
Query: 304 SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR 363
+ + VSWTS I ++G+ EA + DM A V+PN +TF+ L+ C G + G
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGS 88
Query: 364 ALFRSMVEDYGIKPSLQHY-----TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
++ Y K L T ++ ++S+ G +A + M + TW ++
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNTMI 147
Query: 419 SACKHHGNTQMAVRIADKLLCLKPE-DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVK 477
G A ++ DK+ PE D S+ + N + E + M + VK
Sbjct: 148 DGYMRSGQVDNAAKMFDKM----PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 478 KEPGY--------SCIDLG 488
P Y +C +LG
Sbjct: 204 --PDYVAIIAALNACTNLG 220
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 275/504 (54%), Gaps = 37/504 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H +K GL + ++L+D Y KCG+++DA ++F +LP +VS ++++ +
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
NL A+ + + +L +G P F+T+++AC P + G Q H
Sbjct: 609 NL-EEAVVLFQEMLTRGVNPSEITFATIVEACHK--PESLTLGTQFHGQI---------- 655
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE-SPYK 204
K G G + IS M Y S +EA LF E S K
Sbjct: 656 ---------TKRGFSSEGEYL--------GISLLGM---YMNSRGMTEACALFSELSSPK 695
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
++ WT ++SG Q+G +A + +MR +G+ + D +V+ C+ L+ G+ +
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV-LPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK-DVVSWTSIIVGTAQHGQ 323
H L+ L ++ SN L+DMYAKC D+ + +F EM R+ +VVSW S+I G A++G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
AE+AL ++D M + + P+E+TF+G++ ACS+ G VS GR +F M+ YGI+ + H
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++DL R G+L EA++ I + PD W++LL AC+ HG+ A+KL+ L+P+
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
+ S+Y+LLSN+YA WE + +RK+M + VKK PGYS ID+ + +H+F AG+ SH
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Query: 504 KDEILGLMRKLDAEMRKRGYV-PD 526
+I + L M+ V PD
Sbjct: 995 IGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 202/452 (44%), Gaps = 42/452 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ K +H++ + G+ N ++D Y KC + A + FD L +D+ +W S+LS +
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
P + L SL P+ F FS ++ CA +V G+Q+H + +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR--ETNVEFGRQIHCSMIKMGLERN 194
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR------- 196
LVDMYAK R VF+ I N++ WT + SGY ++G EA+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 197 ----------------------------LFRESPYKNLFAWTALISGLVQSGNGVDAFYT 228
LF E ++ AW +ISG + G A
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA 288
F MR+ + + L SV+ A +A +LG VH I LG S +++ ++LV MY+
Sbjct: 315 FFNMRKSSVK-STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
KC + AA +F + K+ V W ++I G A +G++ + + L+ DM S+ ++ TF
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
L+ C+ + G + F S++ + +L L+D++++ G L++A + M
Sbjct: 434 LLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CD 491
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKL-LC 439
D TW ++ + N A + ++ LC
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 209/435 (48%), Gaps = 43/435 (9%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
+ S LS+ A + + H+ IIK L+++ N L+D Y KCG L+DA Q+F+
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
+ RD V+W +++ + A + + + G D ++ +KAC ++ L+
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY-- 546
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
QGKQVH + D S+L+DMY+K G+ R VF S+ + +S A+I+GY+
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS 606
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
++ EA+ LF+E M G+ ++ + +
Sbjct: 607 QNNLE-EAVVLFQE-------------------------------MLTRGVNPSE-ITFA 633
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYES-CVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
++V AC LG Q HG + G+ S ++ +L+ MY + A +F E+S
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 306 -KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
K +V WT ++ G +Q+G EEAL Y +M V P++ TFV ++ CS + + +GRA
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 365 LFRSMVEDYGIKPSLQHYT--CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK 422
+ S++ + + L T L+D++++ G + + + M + +W +L++
Sbjct: 754 I-HSLI--FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYA 810
Query: 423 HHGNTQMAVRIADKL 437
+G + A++I D +
Sbjct: 811 KNGYAEDALKIFDSM 825
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 189/427 (44%), Gaps = 36/427 (8%)
Query: 14 LSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDL 72
LS+ AR++ +++H +IK GL ++ L+D Y KC + DA ++F+ + +
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPL--------- 123
V W + S A LP A+ + + +G +PDH F T+I +G L
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
Query: 124 ---------------HVNQGKQVHA--HFLLSPYANDDVVKSTLVDMYAKFGLP---DYG 163
H +G + A +F ++ +STL + + G+ D G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 164 RAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS 219
V L N ++++S Y++ + A ++F KN W A+I G +
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 220 GNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFI 279
G F+ M+ G I D +S++ CA E+G Q H ++I +F+
Sbjct: 407 GESHKVMELFMDMKSSGYNI-DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 280 SNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARV 339
NALVDMYAKC L A+ IF M +D V+W +II Q EA L+ M +
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 340 KPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAE 399
+ + AC++V + +G+ + V+ G+ L + L+D++S+ G + +A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 400 NLIRTMP 406
+ ++P
Sbjct: 585 KVFSSLP 591
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 145/352 (41%), Gaps = 49/352 (13%)
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
GK VH+ L+ ++ + + +VD+YAK Y FD + + +W +M+S Y+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSS 137
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
G+ + LR +FV + + I + S
Sbjct: 138 IGKPGKVLR-------------------------------SFVSLFENQI-FPNKFTFSI 165
Query: 248 VVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD 307
V+ CA E G+Q+H +I +G E + ALVDMYAKC + A+ +F + +
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFR 367
V WT + G + G EEA+ +++ M +P+ + FV +I +G + R LF
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFG 285
Query: 368 SMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL---IRTMPVSPDEPTWAALLSACKHH 424
M P + + ++ + G A +R V T ++LSA
Sbjct: 286 EMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 425 GNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEV 476
N + + + + + L L SN+Y G+S+ SK K+ +V
Sbjct: 341 ANLDLGLVVHAEAIKLG--------LASNIYVGSSLVSMYSKCEKMEAAAKV 384
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 291/539 (53%), Gaps = 42/539 (7%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
Y + LSS+A L +++H IK+GL N L+ Y KC L +A ++FD+
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
R+ ++W+++++ + A+ + + G +P + ++ AC+++ ++
Sbjct: 282 SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI--CYLE 339
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
+GKQ+H+ FLL K G + R +F + TA++ YA
Sbjct: 340 EGKQLHS-FLL------------------KLG---FERHLFAT---------TALVDMYA 368
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
++G ++A + F +++ WT+LISG VQ+ + +A + +M+ GI DP ++
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP-TMA 427
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
SV+ AC++LA ELGKQVHG I G+ V I +AL MY+KC L +F K
Sbjct: 428 SVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK 487
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
DVVSW ++I G + +GQ +EAL L+++M++ ++P++VTFV +I ACS+ G V +G F
Sbjct: 488 DVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYF 547
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
M + G+ P + HY C++DL SR+G L EA+ I + + W LLSACK+HG
Sbjct: 548 NMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGK 607
Query: 427 TQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
++ V +KL+ L + S+Y+ LS +Y +V +V K M V KE G S I+
Sbjct: 608 CELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
Query: 487 LGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVP--DTSYVLHDMDQQEKERQL 543
L + HVF G+T HPM +E L+ + +M + G+V D+S+V ++E+ QL
Sbjct: 668 LKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFV-----EEEEGTQL 721
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 230/450 (51%), Gaps = 40/450 (8%)
Query: 3 LSRHAYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDAL 61
L+ H L +L+ ++Q + + +H QII++G S N L++ Y KCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 62 QLFDTLPHRDLVSWASVLSACNL---ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA 118
+F+ + +D+VSW S+++ + + + + + R + Q P+ + + + KA +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
++ V G+Q HA + D V ++LV MY K GL + G VF + N+ +W
Sbjct: 130 SLQSSTV--GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTW 187
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+ M+SGYA GR EA+++F NLF L + G D+ Y F
Sbjct: 188 STMVSGYATRGRVEEAIKVF------NLF--------LREKEEGSDSDYVFTA------- 226
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
VLSS+ A + V LG+Q+H + I G V +SNALV MY+KC L A
Sbjct: 227 -----VLSSLA---ATIYV-GLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACK 277
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F ++ ++W++++ G +Q+G++ EA+ L+ M SA +KP+E T VG++ ACS++
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
+ +G+ L S + G + L T L+D+++++G L +A + D W +L+
Sbjct: 338 LEEGKQL-HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395
Query: 419 SACKHHGNTQMAVRIADKLLC--LKPEDPS 446
S + + + A+ + ++ + P DP+
Sbjct: 396 SGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 217/438 (49%), Gaps = 42/438 (9%)
Query: 20 QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
QS + ++ HA ++K +L+ Y K GL++D L++F +P R+ +W++++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 80 SACNLANLPHRALSISRSLL---HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL 136
S A+ + L +G D +VF+ ++ + A ++V G+Q+H +
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLA--ATIYVGLGRQIHCITI 248
Query: 137 LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR 196
+ + + LV MY+K SLN EA +
Sbjct: 249 KNGLLGFVALSNALVTMYSK-------------CESLN------------------EACK 277
Query: 197 LFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA 256
+F S +N W+A+++G Q+G ++A F +M GI ++ ++ V+ AC+++
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG-VLNACSDIC 336
Query: 257 VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIV 316
E GKQ+H ++ LG+E +F + ALVDMYAK L A+ F + +DV WTS+I
Sbjct: 337 YLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
G Q+ EEAL LY M +A + PN+ T ++ ACS++ + G+ + ++ +G
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK-HGFG 455
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADK 436
+ + L ++S+ G L++ + R P + D +W A++S H+G A+ + ++
Sbjct: 456 LEVPIGSALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQGDEALELFEE 514
Query: 437 LLC--LKPEDPSSYILLS 452
+L ++P+D + ++S
Sbjct: 515 MLAEGMEPDDVTFVNIIS 532
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
G+ VHG +I G +C+ +N LV+ YAKC L A IF + KDVVSW S+I G +Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 321 HGQAEEA---LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
+G + + L+ +M + + PN T G+ A S++ + GR ++V
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA-HALVVKMSSFG 151
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+ T L+ ++ ++G +++ + MP + TW+ ++S G + A+++ +
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 438 LCLKPEDPSSYILLSNV 454
L K E S + + V
Sbjct: 211 LREKEEGSDSDYVFTAV 227
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 277/542 (51%), Gaps = 37/542 (6%)
Query: 21 SPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLS 80
+P L + A +IK+ L+Q N + A L A+ + ++ + ++
Sbjct: 785 TPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFK 844
Query: 81 ACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY 140
+ P R+L + +L P + +S+L+KA + G+ + AH +
Sbjct: 845 GFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF----GESLQAHIWKFGF 900
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS------------ 188
+++TL+D Y+ G R VFD + + I+WT M+S Y R
Sbjct: 901 GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQ 960
Query: 189 -------------------GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
G +A LF + P K++ +WT +I G Q+ +A F
Sbjct: 961 MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
KM +EGI I D + +S+V+ ACA+L V E+GK+VH + G+ V+I +ALVDMY+K
Sbjct: 1021 YKMMEEGI-IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK 1079
Query: 290 CSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
C L A +F + +K++ W SII G A HG A+EAL ++ M VKPN VTFV +
Sbjct: 1080 CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
AC++ GLV +GR ++RSM++DY I +++HY ++ LFS++G + EA LI M P
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEP 1199
Query: 410 DEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRK 469
+ W ALL C+ H N +A +KL+ L+P + Y LL ++YA + W +V+++R
Sbjct: 1200 NAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRG 1259
Query: 470 LMMVKEVKKE-PGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTS 528
M ++K PG S I + K H+F A + SH DE+ L+ ++ +M GYV +T
Sbjct: 1260 RMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETE 1319
Query: 529 YV 530
V
Sbjct: 1320 NV 1321
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 278/532 (52%), Gaps = 59/532 (11%)
Query: 22 PFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA 81
P ++H IKS L+ + +L D Y +CG L A ++FD + D SW +++
Sbjct: 286 PDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
A+S+ + GF PD +L+ CA P+ ++QG Q+H++ + +
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 142 NDDVVKSTLV-------DMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
D V ++L+ D+Y F L + D ++ +S+SW +++ + + E
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFE------DFRNNADSVSWNTILTACLQHEQPVEM 457
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
LRLF+ L+S D + + +++ C
Sbjct: 458 LRLFK----------LMLVSECE----------------------PDHITMGNLLRGCVE 485
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
++ +LG QVH + G FI N L+DMYAKC L A+ IF M +DVVSW+++
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
IVG AQ G EEAL L+ +M SA ++PN VTFVG++ ACS+VGLV +G L+ +M ++G
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIA 434
I P+ +H +C++DL +R+G L+EAE I M + PD W LLSACK GN +A + A
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAA 665
Query: 435 DKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
+ +L + P + ++++LL +++A + WEN + +R M +VKK PG S I++ + H+F
Sbjct: 666 ENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIF 725
Query: 495 YAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWH 546
+A + HP +D+I ++ + ++M L + + Q K+R F H
Sbjct: 726 FAEDIFHPERDDIYTVLHNIWSQM------------LDECNPQHKKRLQFIH 765
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 203/432 (46%), Gaps = 36/432 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+K+H I+ S N +L YGKCG L+DA ++FD +P R+LVS+ SV++ +
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQN 146
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+ + +L + PD F F ++IKACA+ V GKQ+HA + ++ +
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD--VGLGKQLHAQVIKLESSSHLI 204
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
++ L+ MY +F VF I + ISW+++I+G+++ G EAL +E
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE----- 259
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
M G+ + + S + AC++L + G Q+H
Sbjct: 260 --------------------------MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
GL I +L DMYA+C L +A+ +F ++ R D SW II G A +G A+
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EA++++ M S+ P+ ++ L+ A + +S+G + S + +G L L
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI-HSYIIKWGFLADLTVCNSL 412
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDP 445
L +++ L NL + D +W +L+AC H +R+ KL+ + +P
Sbjct: 413 LTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECEP 471
Query: 446 SSYILLSNVYAG 457
+I + N+ G
Sbjct: 472 -DHITMGNLLRG 482
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 47/418 (11%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
+A S + + A S L K+LHAQ+IK S H N L+ Y + + DA ++F
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYG 228
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLHV 125
+P +DL+SW+S+++ + ALS + +L G F P+ ++F + +KAC+++ L
Sbjct: 229 IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRP 286
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
+ G Q+H + S A + + +L DMYA+ G + R VFD I ++ SW +I+G
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
A +G EA+ +F + MR G I D + L
Sbjct: 347 ANNGYADEAVSVFSQ-------------------------------MRSSGF-IPDAISL 374
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM-S 304
S++ A G Q+H +I G+ + + + N+L+ MY CSDL +F + +
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
D VSW +I+ QH Q E L L+ M+ + +P+ +T L+ C + + G
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG-- 492
Query: 365 LFRSMVEDY----GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
S V Y G+ P L+D++++ G L +A + +M + D +W+ L+
Sbjct: 493 ---SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLI 546
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 45/334 (13%)
Query: 109 VFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFD 168
+ +LI AC++ L QG+++H H L S D ++ + ++ MY K G R VFD
Sbjct: 69 TYISLICACSSSRSL--AQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYT 228
+ N +S+T++I+GY+++G+ +EA+RL
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRL------------------------------- 155
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA 288
++KM QE + + D S++ ACA+ + LGKQ+H VI L S + NAL+ MY
Sbjct: 156 YLKMLQEDL-VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARV-KPNEVTFV 347
+ + + A +F + KD++SW+SII G +Q G EAL+ +M+S V PNE F
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT----CLLDLFSRSGHLDEAENLIR 403
+ ACS++ R + S + IK L L D+++R G L+ A +
Sbjct: 275 SSLKACSSL-----LRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+ PD +W +++ ++G AV + ++
Sbjct: 330 QIE-RPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 140/305 (45%), Gaps = 31/305 (10%)
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
S++ AC++ G+++H ++ + ++N ++ MY KC L A+ +F M +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
++VS+TS+I G +Q+GQ EA+ LY M+ + P++ F +I AC++ V G+ L
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
+++ L L+ ++ R + +A + +P+ D +W+++++ G
Sbjct: 192 AQVIK-LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM-KDLISWSSIIAGFSQLGF 249
Query: 427 TQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMW--ENVSKVRKLMMVKEVKKE--PGY 482
A+ ++L P+ YI S++ A +S+ + S++ L + E+ G
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 483 SCIDLGKES---------------------HVFYAGETSHPMKDEILGLMRKLDAEMRKR 521
S D+ +V AG ++ DE + + ++MR
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF----SQMRSS 365
Query: 522 GYVPD 526
G++PD
Sbjct: 366 GFIPD 370
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/492 (30%), Positives = 270/492 (54%), Gaps = 7/492 (1%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+HA+II++ Q L+ + A +F + + ++ + +++ +
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+S+ ++H PD++V ++++KAC + +++HA L + + V
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC------DLKVCREIHAQVLKLGFGSSRSVG 161
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
++++Y K G + +FD + + ++ T MI+ Y+ G EAL LF++ K+
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
WTA+I GLV++ A F +M+ E ++ A+ V+ AC++L ELG+ VH
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVS-ANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
V E F+ NAL++MY++C D+ A+ +F M KDV+S+ ++I G A HG + EA
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
+ + DMV+ +PN+VT V L+ ACS+ GL+ G +F SM + ++P ++HY C++D
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
L R G L+EA I +P+ PD LLSACK HGN ++ +IA +L + D +
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT 460
Query: 448 YILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEI 507
Y+LLSN+YA + W+ +++R+ M ++KEPG S I++ + H F G+ +HP K+ I
Sbjct: 461 YVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAI 520
Query: 508 LGLMRKLDAEMR 519
+++L+ +R
Sbjct: 521 YQRLQELNRILR 532
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGK------------------------------ 53
+ +++HAQ++K G +++ YGK
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 54 -CGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFST 112
CG +++AL+LF + +D V W +++ ++AL + R + + + F
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
++ AC+++G L + G+ VH+ + V + L++MY++ G + R VF +
Sbjct: 261 VLSACSDLGALEL--GRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRE 200
+ IS+ MISG A G EA+ FR+
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRD 346
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 260/499 (52%), Gaps = 36/499 (7%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + +H +I+ G S N+LL+ Y K ++A+ LF + +D++SW++V+ AC
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI-ACY 239
Query: 84 LAN-LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ N AL + ++ G +P+ +++ACA L QG++ H +
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE--QGRKTHELAIRKGLET 297
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
+ V + LVDMY K P+ AVF I P
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRI-------------------------------P 326
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
K++ +W ALISG +G + F M E T D +++ V+G+C+ L E K
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
H VI G++S FI +LV++Y++C L A +F ++ KD V WTS+I G HG
Sbjct: 387 CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHG 446
Query: 323 QAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
+ +AL ++ MV S+ VKPNEVTF+ ++ ACS+ GL+ +G +F+ MV DY + P+L+H
Sbjct: 447 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 506
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
Y L+DL R G LD A + + MP SP LL AC+ H N +MA +A KL L+
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSH 501
Y+L+SNVY WENV K+R + + +KK S I++ ++ H F A + H
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 626
Query: 502 PMKDEILGLMRKLDAEMRK 520
P K+ + GL+++LD M++
Sbjct: 627 PEKEPVYGLLKELDLHMKE 645
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 38/410 (9%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSL-LHQGF 103
++L+ Y KCG + +AL++FD L D+V+W+S++S P++A+ R + +
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
PD TL+ AC + + G+ VH + ++ND + ++L++ YAK
Sbjct: 160 TPDRVTLITLVSACTKLSNSRL--GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
+F I+ + ISW+ +I+ Y ++G +EAL +F +
Sbjct: 218 VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND----------------------- 254
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
M +G VL V+ ACA E G++ H L I G E+ V +S AL
Sbjct: 255 --------MMDDGTEPNVATVL-CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 284 VDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPN 342
VDMY KC A +F + RKDVVSW ++I G +G A ++ + M + +P+
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
+ V ++ +CS +G + + + F S V YG + L++L+SR G L A +
Sbjct: 366 AILMVKVLGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 403 RTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLS 452
+ + D W +L++ HG A+ + ++ P+ LS
Sbjct: 425 NGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 473
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 181/393 (46%), Gaps = 34/393 (8%)
Query: 59 DALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA 118
DA Q+F + R L W ++L + + L + +PD+F +KAC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 119 NMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
+ VN G+ +H + DV + D+Y
Sbjct: 72 ELR--EVNYGEMIHG------FVKKDVTLGS--DLYVG---------------------- 99
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+++I Y + GR EALR+F E ++ W++++SG ++G+ A F +M
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
D + L ++V AC L+ LG+ VHG VI G+ + + + N+L++ YAK A
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F ++ KDV+SW+++I Q+G A EAL +++DM+ +PN T + ++ AC+
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
+ +GR + G++ ++ T L+D++ + +EA + +P D +W AL+
Sbjct: 280 LEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALI 337
Query: 419 SACKHHGNTQMAVRIADKLLCLKPEDPSSYILL 451
S +G ++ +L P + +++
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 289 KCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
K S V A+ +F EM+++ + W +++ ++ Q EE L + M KP+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
+ AC + V+ G + + +D + L + L+ ++ + G + EA + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-K 124
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYA 456
PD TW++++S + +G+ AV +++ P L++ V A
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA 172
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 269/505 (53%), Gaps = 12/505 (2%)
Query: 14 LSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLV 73
L + Q L +K H+ + L P L + L+++A ++FD +P D++
Sbjct: 2 LHMILSQRVILLRKYHSS--ANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVI 59
Query: 74 SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
S +V+ + A + LL G +P+ F F T+I + V GKQ+H
Sbjct: 60 SATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT--SRDVKLGKQLHC 117
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
+ L A++ V S +++ Y K R FD N +S T +ISGY + E
Sbjct: 118 YALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEE 177
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
AL LFR P +++ W A+I G Q+G +A TFV M +EG+ I + + A +
Sbjct: 178 ALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAIS 237
Query: 254 NLAVWELGKQVHGLVIG-LGYESCVFISNALVDMYAKCSDLVAAKYIF--CEMSRKDVVS 310
N+A GK +H I LG VF+ N+L+ Y+KC ++ + F E ++++VS
Sbjct: 238 NIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVS 297
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
W S+I G A +G+ EEA+A+++ MV ++PN VT +G+++AC++ GL+ +G F
Sbjct: 298 WNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKA 357
Query: 370 VEDYGIKPSL---QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
V DY P+L +HY C++D+ SRSG EAE LI++MP+ P W ALL C+ H N
Sbjct: 358 VNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
Query: 427 TQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
++A A K+L L P D SSY++LSN Y+ W+NVS +R+ M +K+ G S I+
Sbjct: 417 KRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIE 476
Query: 487 LGKESHVFYAGETSHPMKDEILGLM 511
+ + VF + ++ +KDE+ ++
Sbjct: 477 VRDQIRVFVNADKNNELKDEVYRML 501
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/519 (33%), Positives = 282/519 (54%), Gaps = 20/519 (3%)
Query: 10 LKSQLSSVARQSPFLT--KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGL----LQDALQL 63
L +S+V +S L K++ + +I SGLS LL C L L A +
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRF---CTLRLCNLSYARFI 79
Query: 64 FDTLPHRDLVSWASVLSACNLANLP---HRALSISRSLLHQGF-QPDHFVFSTLIKACAN 119
FD + +A+VL+A + ++LP A S R ++++ +P+HF++ ++K+
Sbjct: 80 FDRFSFPNTHLYAAVLTAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPY 138
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK-FGLPDYGRAVFDSISSLNSISW 178
+ VH H S + VV++ L+ YA R +FD +S N +SW
Sbjct: 139 LSS--AFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSW 196
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
TAM+SGYARSG S A+ LF + P +++ +W A+++ Q+G ++A F +M E
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+ + + V+ ACA +L K +H S VF+SN+LVD+Y KC +L A
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARV---KPNEVTFVGLIYACSN 355
+F S+K + +W S+I A HG++EEA+A++++M+ + KP+ +TF+GL+ AC++
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 356 VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWA 415
GLVSKGR F M +GI+P ++HY CL+DL R+G DEA ++ TM + DE W
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWG 436
Query: 416 ALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
+LL+ACK HG+ +A L+ L P + +++N+Y WE + RK++ +
Sbjct: 437 SLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Query: 476 VKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKL 514
K PG+S I++ E H FY+ + SHP +EI ++ L
Sbjct: 497 AYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 276/501 (55%), Gaps = 8/501 (1%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+ H +I +GL++ ++A G L+ A +F P + +++ A +L
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 86 NLPHR---ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ P+ A+++ R L +PD F F ++K + + G+Q+H ++ + +
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWF--GRQIHGQVVVFGFDS 149
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V + L+ MY G R +FD + + W A+++GY + G EA L P
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 203 --YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
+N +WT +ISG +SG +A F +M E + D + L +V+ ACA+L EL
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE-PDEVTLLAVLSACADLGSLEL 268
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
G+++ V G V ++NA++DMYAK ++ A +F ++ ++VV+WT+II G A
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
HG EALA+++ MV A V+PN+VTF+ ++ ACS+VG V G+ LF SM YGI P+++
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
HY C++DL R+G L EA+ +I++MP + W +LL+A H + ++ R +L+ L
Sbjct: 389 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL 448
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETS 500
+P + +Y+LL+N+Y+ W+ +R +M VKK G S I++ + F +G+ +
Sbjct: 449 EPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLT 508
Query: 501 HPMKDEILGLMRKLDAEMRKR 521
HP + I +++++D +++ +
Sbjct: 509 HPQVERIHEILQEMDLQIQSK 529
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +++ + + G+++ N ++D Y K G + AL +F+ + R++V+W ++++
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
AL++ ++ G +P+ F ++ AC+++G +
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWV-------------------- 367
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
D+ K M +K+G+ N + MI R+G+ EA + + P+
Sbjct: 368 DLGKRLFNSMRSKYGIHP------------NIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Query: 204 K-NLFAWTALIS 214
K N W +L++
Sbjct: 416 KANAAIWGSLLA 427
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 283/570 (49%), Gaps = 77/570 (13%)
Query: 39 QHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSL 98
+H L+ +Y + GL+++A LFD +P RD+V+W ++++ +N RA +
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 99 LHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA--------------HFLLSPYAN-- 142
+ QG P+ F S+++K+C NM L G VH + +++ YA
Sbjct: 103 VKQGTSPNEFTLSSVLKSCRNMKVLAY--GALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 143 ----------------DDVVKSTLVDMYAKFG-----LPDYGR----------------- 164
+DV +TL+ + G L Y +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 165 ---AVFDSISSLNSISWTAMISG--------------YARSGRRSEALRLFRESPYKNLF 207
A DS+++ I + + G Y R G SEA F E K+L
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
W LIS L +S + +A F + +G + + +S+V ACAN+A G+Q+HG
Sbjct: 281 TWNTLISELERS-DSSEALLMFQRFESQGF-VPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM-SRKDVVSWTSIIVGTAQHGQAEE 326
+ G+ V ++NAL+DMYAKC ++ ++ +F E+ R+++VSWTS+++G HG E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
A+ L+D MVS+ ++P+ + F+ ++ AC + GLV KG F M +YGI P Y C++
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI-ADKLLCLKPEDP 445
DL R+G + EA L+ MP PDE TW A+L ACK H + + R+ A K++ LKP+
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
Query: 446 SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKD 505
+Y++LS +YA W + ++VRK+M + KKE G S I + + F + P
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNAS 578
Query: 506 EILGLMRKLDAEMRKRGYVPDTSYVLHDMD 535
+ ++ L E R+ GYVP+ +++D +
Sbjct: 579 SVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++HA +IK G + P N++LD Y +CG L +A F + +DL++W +++S +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ AL + + QGF P+ + F++L+ ACAN+ L N G+Q+H + +
Sbjct: 293 D-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAAL--NCGQQLHGRIFRRGFNKNVE 349
Query: 146 VKSTLVDMYAKFG-LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF 198
+ + L+DMYAK G +PD R + + N +SWT+M+ GY G +EA+ LF
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 249/440 (56%), Gaps = 4/440 (0%)
Query: 47 LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPD 106
L+ Y CG + ++ LFD +R ++ W S++S N+ AL + + ++ + D
Sbjct: 259 LISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET-RED 317
Query: 107 HFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAV 166
+ +I AC +G L GKQ+H H +D VV STL+DMY+K G P +
Sbjct: 318 SRTLAAVINACIGLGFLET--GKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 167 FDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAF 226
F + S ++I +MI Y GR +A R+F K+L +W ++ +G Q+G V+
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 227 YTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDM 286
F +M + + D + LSSV+ ACA+++ ELG+QV +G +S +S++L+D+
Sbjct: 436 EYFHQMHKLDLP-TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 287 YAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTF 346
Y KC + + +F M + D V W S+I G A +GQ EA+ L+ M A ++P ++TF
Sbjct: 495 YCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITF 554
Query: 347 VGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP 406
+ ++ AC+ GLV +GR LF SM D+G P +H++C++DL +R+G+++EA NL+ MP
Sbjct: 555 MVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 407 VSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSK 466
D W+++L C +G M + A+K++ L+PE+ +Y+ LS ++A + WE+ +
Sbjct: 615 FDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSAL 674
Query: 467 VRKLMMVKEVKKEPGYSCID 486
VRKLM V K PG S D
Sbjct: 675 VRKLMRENNVTKNPGSSWTD 694
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 42/425 (9%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N ++ + K G L A +LF+ +P +D+V+ S+L L AL + + L F
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFS 184
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D +T++KACA + L GKQ+HA L+ D + S+LV++YAK G
Sbjct: 185 ADAITLTTVLKACAELEALKC--GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
+ + I + S +A+ISGYA GR +E+ LF + + W ++ISG + + ++
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A F +MR E T D L++V+ AC L E GKQ+H G + +++ L+
Sbjct: 303 ALVLFNEMRNE--TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 285 DMYAKCSD-------------------------------LVAAKYIFCEMSRKDVVSWTS 313
DMY+KC + AK +F + K ++SW S
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 420
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF-RSMVED 372
+ G +Q+G E L + M + +EV+ +I AC+++ + G +F R+ +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI-- 478
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
G+ + L+DL+ + G ++ + TM V DE W +++S +G A+
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQGFEAID 537
Query: 433 IADKL 437
+ K+
Sbjct: 538 LFKKM 542
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 60/312 (19%)
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
+V + L+ MY++ G R +FD + N SW MI GY SG + +LR F P +
Sbjct: 63 IVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER 122
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI------------------------- 239
+ ++W ++SG ++G A F M ++ +
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 240 --ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAK 297
AD + L++V+ ACA L + GKQ+H ++ G E ++++LV++YAKC DL A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 298 Y-------------------------------IFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
Y +F S + V+ W S+I G + E
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
AL L+++M + + + T +I AC +G + G+ + + +G+ + + LL
Sbjct: 303 ALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACK-FGLIDDIVVASTLL 360
Query: 387 DLFSRSGHLDEA 398
D++S+ G EA
Sbjct: 361 DMYSKCGSPMEA 372
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 33/206 (16%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGK-------------------------------C 54
K++H K GL +TLLD Y K C
Sbjct: 338 KQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSC 397
Query: 55 GLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLI 114
G + DA ++F+ + ++ L+SW S+ + + L + D S++I
Sbjct: 398 GRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVI 457
Query: 115 KACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLN 174
ACA++ L + G+QV A + +D VV S+L+D+Y K G ++GR VFD++ +
Sbjct: 458 SACASISSLEL--GEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 175 SISWTAMISGYARSGRRSEALRLFRE 200
+ W +MISGYA +G+ EA+ LF++
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKK 541
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 129/299 (43%), Gaps = 53/299 (17%)
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
++ Y+RSG+ A LF E P +N F+W +I G + SG + F M +
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERD---- 123
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
GY N +V +AK +L A+ +F
Sbjct: 124 -------------------------------GYSW-----NVVVSGFAKAGELSVARRLF 147
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
M KDVV+ S++ G +G AEEAL L+ ++ + +T ++ AC+ + +
Sbjct: 148 NAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALK 204
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
G+ + ++ G++ + + L++++++ G L A ++ + PD+ + +AL+S
Sbjct: 205 CGKQIHAQILIG-GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISG 262
Query: 421 CKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE 479
+ G + + D+ + IL +++ +G N K+ L++ E++ E
Sbjct: 263 YANCGRVNESRGLFDR------KSNRCVILWNSMISG--YIANNMKMEALVLFNEMRNE 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 13/209 (6%)
Query: 251 ACANLAVWELGKQVHGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV 309
+C++ L +Q +GL++ G+ S V ++N L+ MY++ + A+ +F EM ++
Sbjct: 35 SCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYF 94
Query: 310 SWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
SW ++I G G+ +L +D M V G A G +S R LF +M
Sbjct: 95 SWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKA----GELSVARRLFNAM 150
Query: 370 VE-DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
E D SL H L +G+ +EA L + + S D T +L AC +
Sbjct: 151 PEKDVVTLNSLLHGYIL------NGYAEEALRLFKELNFSADAITLTTVLKACAELEALK 204
Query: 429 MAVRIADKLLCLKPE-DPSSYILLSNVYA 456
+I ++L E D L NVYA
Sbjct: 205 CGKQIHAQILIGGVECDSKMNSSLVNVYA 233
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 12/246 (4%)
Query: 1 MSLSRHAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
+ L +L S +S+ A S L +++ A+ GL + ++L+D Y KCG ++
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
++FDT+ D V W S++S A+ + + + G +P F ++ AC
Sbjct: 504 GRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNY 563
Query: 120 MGPLHVNQGKQVHAHFLLS-PYANDDVVKSTLVDMYAKFGLPDYGRAV-----FDSISSL 173
G V +G+++ + + D S +VD+ A+ G + + FD S+
Sbjct: 564 CGL--VEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSM 621
Query: 174 -NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKM 232
+SI + +GY G+++ A ++ P +N A+ L + SG+ + M
Sbjct: 622 WSSILRGCVANGYKAMGKKA-AEKIIELEP-ENSVAYVQLSAIFATSGDWESSALVRKLM 679
Query: 233 RQEGIT 238
R+ +T
Sbjct: 680 RENNVT 685
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 275/555 (49%), Gaps = 46/555 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + H Q+I+ GL ++ N LL Y K G + DA LF +P R+ +SW ++ +
Sbjct: 176 LCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFS 235
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIK---------------------------- 115
A+ I + + F+PD +++++
Sbjct: 236 QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 116 -------ACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFD 168
CA + L + ++VH + + + ++ L+ +Y K G +F
Sbjct: 296 ALAVFFSVCAELEALSI--AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFR 353
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFRE--------SPYKNLFAWTALISGLVQSG 220
I + SW ++I+ + +G+ EAL LF E + N+ WT++I G G
Sbjct: 354 QIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG 413
Query: 221 NGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFIS 280
G D+ F +M Q +A+ + + ++ CA L LG+++HG VI + +
Sbjct: 414 RGDDSLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ 472
Query: 281 NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
NALV+MYAKC L +F + KD++SW SII G HG AE+AL+++D M+S+
Sbjct: 473 NALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH 532
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
P+ + V ++ ACS+ GLV KGR +F SM + +G++P +HY C++DL R G L EA
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Query: 401 LIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASM 460
+++ MP+ P ALL++C+ H N +A IA +L L+PE SY+LLSN+Y+
Sbjct: 593 IVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGR 652
Query: 461 WENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRK 520
WE + VR L K++KK G S I++ K+ + F +G + I ++ L + M K
Sbjct: 653 WEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLK 712
Query: 521 RGYVPDTSYVLHDMD 535
+G D + D+D
Sbjct: 713 KGPTHDGNNYEDDLD 727
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 218/513 (42%), Gaps = 61/513 (11%)
Query: 26 KKLHAQIIKSG-LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP---HRDLVSWASVLSA 81
+++HAQ++ S + + L+ Y + GLL DA +F+T+ DL W S+L A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
L AL + R + +G D ++ +++AC +G + + H +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL--CRAFHTQVIQIGLK 190
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF--- 198
+ V + L+ +Y K G +F + N +SW MI G+++ A+++F
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 199 -RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
RE + WT+++S Q G D F MR G ++ L+ CA L
Sbjct: 251 QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE-ALAVFFSVCAELEA 309
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
+ ++VHG VI G+E + NAL+ +Y K + A+++F ++ K + SW S+I
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 318 TAQHGQAEEALALYDDMVS----ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM---- 369
G+ +EAL+L+ ++ VK N VT+ +I C+ G FR M
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK 429
Query: 370 --------------------------VEDYGIKPSLQH----YTCLLDLFSRSGHLDEAE 399
+ + I+ S+ L++++++ G L E
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEG- 488
Query: 400 NLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC--LKPEDPSSYILLSNVYAG 457
+L+ D +W +++ HG + A+ + D+++ P+ I L V +
Sbjct: 489 SLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG----IALVAVLSA 544
Query: 458 ASMWENVSKVRKLM--MVKEVKKEPG---YSCI 485
S V K R++ M K EP Y+CI
Sbjct: 545 CSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI 577
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 248/466 (53%), Gaps = 40/466 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFP-NTLLDAYGKCGLLQDALQLF---DTLPHRDLVSWASVL 79
+ K+LH ++KSGL + PF + L+D Y CG L A +F + + W S+L
Sbjct: 256 MGKQLHCCVVKSGL-ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
S + AL + + D + S +K C N L + G QVH+ ++S
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL--GLQVHSLVVVSG 372
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
Y D +V S LVD++A G +A +LF
Sbjct: 373 YELDYIVGSILVDLHANVG-------------------------------NIQDAHKLFH 401
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
P K++ A++ LI G V+SG AFY F ++ + G+ AD ++S+++ C++LA
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLD-ADQFIVSNILKVCSSLASLG 460
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
GKQ+HGL I GYES + ALVDMY KC ++ +F M +DVVSWT IIVG
Sbjct: 461 WGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFG 520
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
Q+G+ EEA + M++ ++PN+VTF+GL+ AC + GL+ + R+ +M +YG++P L
Sbjct: 521 QNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYL 580
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
+HY C++DL ++G EA LI MP+ PD+ W +LL+AC H N + IA+KLL
Sbjct: 581 EHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK 640
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
P+DPS Y LSN YA MW+ +SKVR+ K KE G S I
Sbjct: 641 GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSWI 685
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 10/419 (2%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ + A +IK G+SQ+ N ++ Y LL DA ++FD + R++V+W +++S
Sbjct: 25 ESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSD 84
Query: 86 NLPHRALSISRSLLHQGFQP-DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
P++A+ + R +L + + F++S ++KAC +G + + G V+ D
Sbjct: 85 GKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL--GILVYERIGKENLRGDV 142
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V+ +++VDMY K G + F I +S SW +ISGY ++G EA+ LF P
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP 202
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
N+ +W LISG V G+ A V+M++EG+ + D L + AC+ + +GKQ+
Sbjct: 203 NVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVL-DGFALPCGLKACSFGGLLTMGKQL 260
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS---RKDVVSWTSIIVGTAQH 321
H V+ G ES F +AL+DMY+ C L+ A +F + V W S++ G +
Sbjct: 261 HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
+ E AL L + + + + T G + C N + G + S+V G +
Sbjct: 321 EENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLVVVSGYELDYIV 379
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
+ L+DL + G++ +A L +P + D ++ L+ C G +A + +L+ L
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 136/326 (41%), Gaps = 64/326 (19%)
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
+G+ + AH + + + + + ++ MY F L VFD +S N ++WT M+SGY
Sbjct: 23 RGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
G+ ++A+ L+R +M A+ + S
Sbjct: 83 SDGKPNKAIELYR-------------------------------RMLDSEEEAANEFMYS 111
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
+V+ AC + +LG V+ + V + N++VDMY K L+ A F E+ R
Sbjct: 112 AVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRP 171
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARV--------------KPNEVTFV----- 347
SW ++I G + G +EA+ L+ M V P + F+
Sbjct: 172 SSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQR 231
Query: 348 -GLIY----------ACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
GL+ ACS GL++ G+ L +V+ G++ S + L+D++S G L
Sbjct: 232 EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLI 290
Query: 397 EAENLI--RTMPVSPDEPTWAALLSA 420
A ++ + V+ W ++LS
Sbjct: 291 YAADVFHQEKLAVNSSVAVWNSMLSG 316
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 252 CANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSW 311
C + ++ G+ + VI G VFI+N ++ MY L A +F EMS +++V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 312 TSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
T+++ G G+ +A+ LY M+ S NE + ++ AC VG + G ++ +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 371 EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA-CK 422
++ ++ + ++D++ ++G L EA + + + + P +W L+S CK
Sbjct: 135 KE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCK 185
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 172/606 (28%), Positives = 295/606 (48%), Gaps = 49/606 (8%)
Query: 7 AYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQ-DALQLFD 65
Y+ L S R F K++H+Q IK G N L+D Y KC + +A ++F
Sbjct: 327 TYSAILSLCSAVRSLDF-GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV 125
+ ++VSW +++ + ++ + +P+ S +++AC+ + HV
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL--RHV 443
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
+ ++HA+ L + VV ++LVD YA DY V S+ ++I++T++++ +
Sbjct: 444 RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
G+ AL + M +GI + D L L
Sbjct: 504 NELGKHEMALSVIN-------------------------------YMYGDGIRM-DQLSL 531
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
+ A ANL E GK +H + G+ + N+LVDMY+KC L AK +F E++
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT 591
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
DVVSW ++ G A +G AL+ +++M +P+ VTF+ L+ ACSN L G
Sbjct: 592 PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEY 651
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
F+ M + Y I+P ++HY L+ + R+G L+EA ++ TM + P+ + LL AC++ G
Sbjct: 652 FQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRG 711
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
N + +A+K L L P DP+ YILL+++Y + E K R LM K + K+ G S +
Sbjct: 712 NLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
Query: 486 DLGKESHVFYAGETSHPMK-DEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLF 544
++ + H F + + + K + I + + E+++ G
Sbjct: 772 EVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG------------SPYRGNENAS 819
Query: 545 WHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFK 604
+HS + AV YG + A P + +VKN +C DCH + +++ + ++I VRD + H FK
Sbjct: 820 FHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFK 879
Query: 605 DGKCSC 610
+G+CSC
Sbjct: 880 NGECSC 885
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 203/410 (49%), Gaps = 38/410 (9%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H +IK+G + ++L D Y KCG ++A +LF +L + D +SW ++S+ A
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
AL ++ G P+ F F L+ A + +G + GK +H++ ++ + V+
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG---LEFGKTIHSNIIVRGIPLNVVL 261
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
K++LVD Y++F + V +S + WT+++SG+ R+ R EA+
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVG---------- 311
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
TF++MR G+ + S+++ C+ + + GKQ+H
Sbjct: 312 ---------------------TFLEMRSLGLQ-PNNFTYSAILSLCSAVRSLDFGKQIHS 349
Query: 267 LVIGLGYESCVFISNALVDMYAKCS-DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
I +G+E + NALVDMY KCS V A +F M +VVSWT++I+G HG +
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
+ L +MV V+PN VT G++ ACS + V + + ++ + + + L
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSL 468
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
+D ++ S +D A N+IR+M D T+ +L++ G +MA+ + +
Sbjct: 469 VDAYASSRKVDYAWNVIRSMK-RRDNITYTSLVTRFNELGKHEMALSVIN 517
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 215/444 (48%), Gaps = 40/444 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H +IK GL ++ N LL Y K + +A +LFD + HR + +W ++SA +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
ALS+ ++ G P+ F FS+++++CA G ++ G +VH + + + + VV
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCA--GLRDISYGGRVHGSVIKTGFEGNSVVG 162
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
S+L D+Y+K G +F S+ + ++ISWT MIS + + EAL+ + E
Sbjct: 163 SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE------- 215
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+V++G + F TFVK+ +GA + L + E GK +H
Sbjct: 216 --------MVKAGVPPNEF-TFVKL----------------LGASSFLGL-EFGKTIHSN 249
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
+I G V + +LVD Y++ S + A + +DV WTS++ G ++ +A+EA
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
+ + +M S ++PN T+ ++ CS V + G+ + ++ G + S L+D
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVD 368
Query: 388 LFSR-SGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
++ + S EA + M VSP+ +W L+ HG Q + ++ +K E
Sbjct: 369 MYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEM--VKREVEP 425
Query: 447 SYILLSNVYAGASMWENVSKVRKL 470
+ + LS V S +V +V ++
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEI 449
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 196/427 (45%), Gaps = 38/427 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K +H+ II G+ + +L+D Y + ++DA+++ ++ +D+ W SV+S
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+ + G QP++F +S ++ C+ + L GKQ+H+ + + +
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF--GKQIHSQTIKVGFEDSTD 361
Query: 146 VKSTLVDMYAKFGLPDY-GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
V + LVDMY K + VF ++ S N +SW
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW-------------------------- 395
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
T LI GLV G D F ++M + + + + LS V+ AC+ L ++
Sbjct: 396 -----TTLILGLVDHGFVQDCFGLLMEMVKREVE-PNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H ++ + + + N+LVD YA + A + M R+D +++TS++ + G+
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKH 509
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E AL++ + M ++ ++++ G I A +N+G + G+ L V+ G +
Sbjct: 510 EMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS-GFSGAASVLNS 568
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
L+D++S+ G L++A+ + + +PD +W L+S +G A+ +++ +K +
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMR-MKETE 626
Query: 445 PSSYILL 451
P S L
Sbjct: 627 PDSVTFL 633
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
+G +H VI G + + N L+ +Y K + A+ +F EMS + V +WT +I
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
+ + AL+L+++M+++ PNE TF ++ +C+ + +S G + S+++ G + +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT-GFEGNS 159
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
+ L DL+S+ G EA L ++ + D +W ++S+
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISS 199
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 255/496 (51%), Gaps = 48/496 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLL--QDALQLFDTLPHRDLVSWASVLSA 81
+ K +H I K GLS PN L+D Y +CG L +DA++LF+ + RD VSW S+L
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
L+KA G+ A L
Sbjct: 195 -------------------------------LVKA-----------GELRDARRLFDEMP 212
Query: 142 NDDVVK-STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
D++ +T++D YA+ +F+ + N++SW+ M+ GY+++G A +F +
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272
Query: 201 SPY--KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
P KN+ WT +I+G + G +A +M G+ D + S++ AC +
Sbjct: 273 MPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-DAAAVISILAACTESGLL 331
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
LG ++H ++ S ++ NAL+DMYAKC +L A +F ++ +KD+VSW +++ G
Sbjct: 332 SLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGL 391
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
HG +EA+ L+ M ++P++VTF+ ++ +C++ GL+ +G F SM + Y + P
Sbjct: 392 GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
++HY CL+DL R G L EA +++TMP+ P+ W ALL AC+ H +A + D L+
Sbjct: 452 VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLV 511
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGE 498
L P DP +Y LLSN+YA A WE V+ +R M V+K G S ++L H F +
Sbjct: 512 KLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFD 571
Query: 499 TSHPMKDEILGLMRKL 514
SHP D+I ++ L
Sbjct: 572 KSHPKSDQIYQMLGSL 587
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/495 (31%), Positives = 261/495 (52%), Gaps = 36/495 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K +HA++ K + + LL Y KCG DA +F ++ +D+V+W S++S
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 86 NLPHRALSISRSLLHQ--GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
AL + + +PD + +++ ACA + L G QVH + + +
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF--GLQVHGSMIKTGLVLN 510
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V S+L+D+Y+K GLP+ AL++F
Sbjct: 511 VFVGSSLIDLYSKCGLPEM-------------------------------ALKVFTSMST 539
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+N+ AW ++IS ++ + F M +GI D + ++SV+ A ++ A GK
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI-FPDSVSITSVLVAISSTASLLKGKS 598
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+HG + LG S + NAL+DMY KC A+ IF +M K +++W +I G HG
Sbjct: 599 LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGD 658
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
AL+L+D+M A P++VTF+ LI AC++ G V +G+ +F M +DYGI+P+++HY
Sbjct: 659 CITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYA 718
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
++DL R+G L+EA + I+ MP+ D W LLSA + H N ++ + A+KLL ++PE
Sbjct: 719 NMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPE 778
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
S+Y+ L N+Y A + +K+ LM K + K+PG S I++ ++VF++G +S PM
Sbjct: 779 RGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPM 838
Query: 504 KDEILGLMRKLDAEM 518
K EI ++ +L + M
Sbjct: 839 KAEIFNVLNRLKSNM 853
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 203/432 (46%), Gaps = 37/432 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++H ++K GL +LL Y KCG++ +A +F + + L W ++++A
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ + AL + + + PD F S +I C+ +G N GK VHA P +
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLY--NYGKSVHAELFKRPIQSTST 409
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
++S L+ +Y+K G VF S+ + ++W ++ISG ++G+ EAL++F +
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGD----- 464
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA-DPLVLSSVVGACANLAVWELGKQV 264
M+ + ++ D +++SV ACA L G QV
Sbjct: 465 --------------------------MKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
HG +I G VF+ ++L+D+Y+KC A +F MS +++V+W S+I +++
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLP 558
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E ++ L++ M+S + P+ V+ ++ A S+ + KG++L + GI
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR-LGIPSDTHLKNA 617
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
L+D++ + G AEN+ + M TW ++ HG+ A+ + D++ E
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEMK-KAGES 675
Query: 445 PSSYILLSNVYA 456
P LS + A
Sbjct: 676 PDDVTFLSLISA 687
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 195/448 (43%), Gaps = 51/448 (11%)
Query: 26 KKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDT-------LPHRDLVSWAS 77
K +H ++ G +++PF T L++ Y KCG L A+Q+FD + RD+ W S
Sbjct: 80 KTIHGSVVVLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 78 VLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
++ + R +L G +PD F S ++ G +GKQ+H L
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 138 SPYANDDVVKSTLVDMYAKFGLP-DYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR 196
+ D +K+ L+DMY KFGL D R + N + W MI G+ SG +L
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 197 LFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA 256
L+ ++ N V T + +GAC+
Sbjct: 259 LY-----------------MLAKNNSVKLVST---------------SFTGALGACSQSE 286
Query: 257 VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIV 316
G+Q+H V+ +G + ++ +L+ MY+KC + A+ +F + K + W +++
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVA 346
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
A++ AL L+ M V P+ T +I CS +GL + G+++ + + I+
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQ 405
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADK 436
+ + LL L+S+ G +A + ++M D W +L+S +G + A+++
Sbjct: 406 STSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGD 464
Query: 437 LLCLKPED----PSSYILLSNVYAGASM 460
+K +D P S I+ S A A +
Sbjct: 465 ---MKDDDDSLKPDSDIMTSVTNACAGL 489
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 197/438 (44%), Gaps = 42/438 (9%)
Query: 7 AYALKSQLSSVARQSPFLT---KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQL 63
A++L +S + ++ F K++H ++++ L L+D Y K GL DA ++
Sbjct: 168 AFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRV 227
Query: 64 FDTLPHR-DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP 122
F + + ++V W ++ + + +L + + + F+ + AC+
Sbjct: 228 FVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ--S 285
Query: 123 LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMI 182
+ G+Q+H + ND V ++L+ MY+K
Sbjct: 286 ENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSK-------------------------- 319
Query: 183 SGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
G EA +F K L W A+++ ++ G A F MRQ+ + + D
Sbjct: 320 -----CGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV-LPDS 373
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
LS+V+ C+ L ++ GK VH + +S I +AL+ +Y+KC A +F
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 303 MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV--SARVKPNEVTFVGLIYACSNVGLVS 360
M KD+V+W S+I G ++G+ +EAL ++ DM +KP+ + AC+ + +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
G + SM++ G+ ++ + L+DL+S+ G + A + +M + + W +++S
Sbjct: 494 FGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISC 551
Query: 421 CKHHGNTQMAVRIADKLL 438
+ ++++ + + +L
Sbjct: 552 YSRNNLPELSIDLFNLML 569
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 147/336 (43%), Gaps = 53/336 (15%)
Query: 100 HQGFQP---DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK 156
H G P F F +L+KAC+ + L + GK +H ++ + D + ++LV+MY K
Sbjct: 50 HDGSSPFWTSVFTFPSLLKACSALTNL--SYGKTIHGSVVVLGWRYDPFIATSLVNMYVK 107
Query: 157 FGLPDYGRAVFD-------SISSLNSISWTAMISGYARSGRRSEALRLFRE----SPYKN 205
G DY VFD +S+ + W +MI GY + R E + FR +
Sbjct: 108 CGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPD 167
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
F+ + ++S + + GN R+E GKQ+H
Sbjct: 168 AFSLSIVVSVMCKEGN----------FRREE------------------------GKQIH 193
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK-DVVSWTSIIVGTAQHGQA 324
G ++ ++ F+ AL+DMY K + A +F E+ K +VV W +IVG G
Sbjct: 194 GFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGIC 253
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E +L LY + VK +F G + ACS GR + +V+ G+ T
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK-MGLHNDPYVCTS 312
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
LL ++S+ G + EAE + + V W A+++A
Sbjct: 313 LLSMYSKCGMVGEAETVFSCV-VDKRLEIWNAMVAA 347
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
I L+Q G + A + + K S++ AC+ L GK +HG V+ LG
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIF-------CEMSRKDVVSWTSIIVGTAQHGQAE 325
+ FI+ +LV+MY KC L A +F +S +DV W S+I G + + +
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 326 EALALYDDMVSARVKPN 342
E + + M+ V+P+
Sbjct: 151 EGVGCFRRMLVFGVRPD 167
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/505 (30%), Positives = 271/505 (53%), Gaps = 12/505 (2%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD---ALQLFDTLPHRDLVSWASVLSAC 82
K++HA +IK+GL + +L A+ C D A +F + H++ W +++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVL-AFC-CASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 83 NLANLPHRALSISRSLL--HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY 140
+ ++ P A+SI +L +P + ++ KA +G G+Q+H +
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG--QARDGRQLHGMVIKEGL 157
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
+D +++T++ MY G +F + + ++W +MI G+A+ G +A LF E
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
P +N +W ++ISG V++G DA F +M+++ + D + S++ ACA L E
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK-PDGFTMVSLLNACAYLGASEQ 276
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
G+ +H ++ +E + AL+DMY KC + +F +K + W S+I+G A
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
+G E A+ L+ ++ + ++P+ V+F+G++ AC++ G V + FR M E Y I+PS++
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
HYT ++++ +G L+EAE LI+ MPV D W++LLSAC+ GN +MA R A L L
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETS 500
P++ Y+LLSN YA ++E + R LM ++++KE G S I++ E H F + +
Sbjct: 457 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGT 516
Query: 501 HPMKDEILGLMRKL--DAEMRKRGY 523
HP EI L+ L D K G+
Sbjct: 517 HPKSAEIYSLLDILNWDVSTIKSGF 541
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 262/502 (52%), Gaps = 48/502 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLL--DAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K++HA ++ +GL + L+ + G L+ A +LFD +P D+ VL
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM---GPLHVNQGKQVHAHFLLSPY 140
+ P + +S+ + +G PD + F+ ++KAC+ + GK V F+L+ Y
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
VK+ L+ +A G +FD + + ++W++M SGYA+ G+ EA+RLF E
Sbjct: 149 -----VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 201 SPYKNLFAWT-------------------------------ALISGLVQSGNGVDAFYTF 229
PYK+ AW A+ISG V G +A F
Sbjct: 204 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG-YESCVFIS----NALV 284
+MR G D + + S++ ACA L E GK++H ++ S +++ NAL+
Sbjct: 264 KEMRDAG-EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALI 322
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
DMYAKC + A +F + +D+ +W ++IVG A H AE ++ ++++M +V PNEV
Sbjct: 323 DMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEV 381
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
TF+G+I ACS+ G V +GR F M + Y I+P+++HY C++D+ R+G L+EA + +
Sbjct: 382 TFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVES 441
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
M + P+ W LL ACK +GN ++ +KLL ++ ++ Y+LLSN+YA W+ V
Sbjct: 442 MKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGV 501
Query: 465 SKVRKLMMVKEVKKEPGYSCID 486
KVRK+ VKK G S I+
Sbjct: 502 QKVRKMFDDTRVKKPTGVSLIE 523
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 264/511 (51%), Gaps = 53/511 (10%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +++H IK G N L+ Y KCG+L+ +F + R++VSW +++S+
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN- 352
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKA--CANMGPLHVNQGKQVHAHFLLSPYA 141
A+SI ++ G P+ F LI A C + +G ++H + + +
Sbjct: 353 ----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE----QIKEGLKIHGLCIKTGFV 404
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
++ V ++ + +YAKF + + F+ I+ FRE
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDIT--------------------------FRE- 437
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA---NLAVW 258
+ +W A+ISG Q+G +A F+ E T+ + SV+ A A +++V
Sbjct: 438 ----IISWNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYTFGSVLNAIAFAEDISVK 491
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
+ G++ H ++ LG SC +S+AL+DMYAK ++ ++ +F EMS+K+ WTSII
Sbjct: 492 Q-GQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAY 550
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
+ HG E + L+ M+ V P+ VTF+ ++ AC+ G+V KG +F M+E Y ++PS
Sbjct: 551 SSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPS 610
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+HY+C++D+ R+G L EAE L+ +P P E ++L +C+ HGN +M ++A+ +
Sbjct: 611 HEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAM 670
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKES-----HV 493
+KPE SY+ + N+YA W+ +++RK M K V KE G+S ID+G
Sbjct: 671 EMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQG 730
Query: 494 FYAGETSHPMKDEILGLMRKLDAEMRKRGYV 524
F +G+ SHP DEI ++ + EM G V
Sbjct: 731 FSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 238/524 (45%), Gaps = 78/524 (14%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H SG + N ++ Y K G +AL +F+ L D+VSW ++LS +
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ 156
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+ AL+ + G D F +ST + C +G G Q+ + + + +D VV
Sbjct: 157 I---ALNFVVRMKSAGVVFDAFTYSTALSFC--VGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++ + MY+ RSG A R+F E +K++
Sbjct: 212 GNSFITMYS-------------------------------RSGSFRGARRVFDEMSFKDM 240
Query: 207 FAWTALISGLVQSGN-GVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+W +L+SGL Q G G +A F M +EG+ + D + +SV+ C + +L +Q+H
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVEL-DHVSFTSVITTCCHETDLKLARQIH 299
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
GL I GYES + + N L+ Y+KC L A K +F +MS ++VVSWT++I +
Sbjct: 300 GLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKD 354
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED-YGIKPSLQHYTC 384
+A++++ +M V PNEVTFVGLI A + +G + ++ + +PS+ +
Sbjct: 355 DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--S 412
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
+ L+++ L++A+ + + +W A++S +G + A+++ L E
Sbjct: 413 FITLYAKFEALEDAKKAFEDITFR-EIISWNAMISGFAQNGFSHEALKM---FLSAAAET 468
Query: 445 -PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
P+ Y S + A + +++ + G C +H+ G S P+
Sbjct: 469 MPNEYTFGSVLNA-------------IAFAEDISVKQGQRC-----HAHLLKLGLNSCPV 510
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHS 547
L LD KRG + ++ V ++M Q+ Q W S
Sbjct: 511 VSSAL-----LDM-YAKRGNIDESEKVFNEMSQK---NQFVWTS 545
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 208/436 (47%), Gaps = 46/436 (10%)
Query: 7 AYALKSQLS-SVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
A+ + LS V + L +L + ++K+GL N+ + Y + G + A ++FD
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 66 TLPHRDLVSWASVLSACNL-ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ +D++SW S+LS + A+ I R ++ +G + DH F+++I C + L
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
+ +Q+H + Y + V + L+ Y+K G+ + ++VF +S N +SWT MI
Sbjct: 294 L--ARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-- 349
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
S N DA F+ MR +G+ +
Sbjct: 350 ----------------------------------SSNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS 304
+ + N + E G ++HGL I G+ S + N+ + +YAK L AK F +++
Sbjct: 376 VGLINAVKCNEQIKE-GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS--KG 362
++++SW ++I G AQ+G + EAL ++ +A PNE TF ++ A + +S +G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK 422
+ +++ G+ + LLD++++ G++DE+E + M ++ W +++SA
Sbjct: 494 QRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYS 551
Query: 423 HHGNTQMAVRIADKLL 438
HG+ + + + K++
Sbjct: 552 SHGDFETVMNLFHKMI 567
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
G Q+HG G+ S V +SNA++ MY K A IF + DVVSW +I+ G
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL---FRSMVEDYGIKP 377
+ + AL M SA V + T+ + C VG S+G L +S V G++
Sbjct: 155 N---QIALNFVVRMKSAGVVFDAFTYSTALSFC--VG--SEGFLLGLQLQSTVVKTGLES 207
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
L + ++SRSG A + M D +W +LLS G
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSF-KDMISWNSLLSGLSQEG 254
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 260/517 (50%), Gaps = 41/517 (7%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
YA S L+S A ++HA IK+ L N+L+D Y KC L DA ++FD
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 67 LPHRDLVSWASVLSACNLANLP---HRALSISRSLLHQGFQPDHFVFSTLIKACANMGPL 123
D+V + +++ + H AL+I R + + +P F +L++A A++ L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 124 HVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK-FGLPDYGRAVFDSISSLNSISWTAMI 182
++ KQ+H D S L+D+Y+ + L D R VFD
Sbjct: 471 GLS--KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD-SRLVFD-------------- 513
Query: 183 SGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
E K+L W ++ +G VQ +A F+++ Q D
Sbjct: 514 -----------------EMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL-QLSRERPDE 555
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
+++V A NLA +LG++ H ++ G E +I+NAL+DMYAKC A F
Sbjct: 556 FTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 303 MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
+ +DVV W S+I A HG+ ++AL + + M+S ++PN +TFVG++ ACS+ GLV G
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK 422
F M+ +GI+P +HY C++ L R+G L++A LI MP P W +LLS C
Sbjct: 676 LKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA 734
Query: 423 HHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGY 482
GN ++A A+ + P+D S+ +LSN+YA MW KVR+ M V+ V KEPG
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGR 794
Query: 483 SCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMR 519
S I + KE H+F + + SH ++I ++ L ++R
Sbjct: 795 SWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 229/437 (52%), Gaps = 42/437 (9%)
Query: 7 AYALKSQLSSVARQSPFLT--KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
Y L + LS+ + PFL K++HA I++ GL N L+D+Y KCG + A +LF
Sbjct: 249 GYILSTVLSACSIL-PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ +P+++++SW ++LS L A+ + S+ G +PD + S+++ +CA++ L
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
G QVHA+ + + ND V ++L+DMYAK R VFD ++ + + + AMI G
Sbjct: 368 F--GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 185 YARSGRR---SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
Y+R G + EAL +FR+ ++ L++ + TFV
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFR-----------LIRP-----SLLTFV----------- 458
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
S++ A A+L L KQ+HGL+ G +F +AL+D+Y+ C L ++ +F
Sbjct: 459 -----SLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
EM KD+V W S+ G Q + EEAL L+ ++ +R +P+E TF ++ A N+ V
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
G+ F + G++ + LLD++++ G ++A + S D W +++S+
Sbjct: 574 GQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISSY 631
Query: 422 KHHGNTQMAVRIADKLL 438
+HG + A+++ +K++
Sbjct: 632 ANHGEGKKALQMLEKMM 648
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 186/382 (48%), Gaps = 46/382 (12%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H QII GL N L++ Y + G + A ++F+ +P R+LVSW++++SACN +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 88 PHRALSISRSLLH-QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+L + + P+ ++ S+ I+AC+ + Q+ + + S + D V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
+ L+D Y K G DY R VFD++ ++++WT MISG + GR +L+LF + N+
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
+ D +LS+V+ AC+ L E GKQ+H
Sbjct: 246 --------------------------------VPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
++ G E + N L+D Y KC ++AA +F M K+++SWT+++ G Q+ +E
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNV--GLVSKGRALFRSMVEDYGIKPSLQH--- 381
A+ L+ M +KP+ +YACS++ S F + V Y IK +L +
Sbjct: 334 AMELFTSMSKFGLKPD-------MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 382 -YTCLLDLFSRSGHLDEAENLI 402
L+D++++ L +A +
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVF 408
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 207/441 (46%), Gaps = 40/441 (9%)
Query: 23 FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
++ +L + ++KSG + L+D Y K G + A +FD LP + V+W +++S C
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ +L + L+ PD ++ ST++ AC+ + L GKQ+HAH L
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLE--GGKQIHAHIL------ 276
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
++GL +++ +I Y + GR A +LF P
Sbjct: 277 -------------RYGL------------EMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
KN+ +WT L+SG Q+ +A F M + G+ D SS++ +CA+L G
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK-PDMYACSSILTSCASLHALGFGT 370
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
QVH I + +++N+L+DMYAKC L A+ +F + DVV + ++I G ++ G
Sbjct: 371 QVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 323 ---QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
+ EAL ++ DM ++P+ +TFV L+ A +++ + + + M + YG+ +
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDI 489
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
+ L+D++S L ++ + M V D W ++ + + A+ + +L
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFAGYVQQSENEEALNLFLELQ- 547
Query: 440 LKPEDPSSYILLSNVYAGASM 460
L E P + + V A ++
Sbjct: 548 LSRERPDEFTFANMVTAAGNL 568
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 131/268 (48%), Gaps = 8/268 (2%)
Query: 181 MISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA 240
+I+ Y+R+G A ++F + P +NL +W+ ++S G ++ F++ +
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 241 DPLVLSSVVGACANL---AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAK 297
+ +LSS + AC+ L W + Q+ ++ G++ V++ L+D Y K ++ A+
Sbjct: 145 NEYILSSFIQACSGLDGRGRW-MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 298 YIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVG 357
+F + K V+WT++I G + G++ +L L+ ++ V P+ ++ ACS +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 358 LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAAL 417
+ G+ + ++ YG++ L+D + + G + A L MP + + +W L
Sbjct: 264 FLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTL 321
Query: 418 LSACKHHGNTQMAVRIADKL--LCLKPE 443
LS K + + A+ + + LKP+
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPD 349
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VHG +I G E ++SN L+++Y++ +V A+ +F +M +++VSW++++ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 324 AEEALALYDDMVSARV-KPNEVTFVGLIYACSNVGLVSKGRAL---FRSMVEDYGIKPSL 379
EE+L ++ + R PNE I ACS GL +GR + +S + G +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
T L+D + + G++D A + +P TW ++S C G + +++++ +L+
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLM- 241
Query: 440 LKPED---PSSYILLSNVYAGASM 460
ED P YI LS V + S+
Sbjct: 242 ---EDNVVPDGYI-LSTVLSACSI 261
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 260/484 (53%), Gaps = 16/484 (3%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRA-LSISRSLLHQGF 103
NT++D Y + G + AL+LFD +P R++VSW S++ A L R + + +L +
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKA-----LVQRGRIDEAMNLFERMP 198
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK-STLVDMYAKFGLPDY 162
+ D ++ ++ A GK A L +++ + ++ YA+ D
Sbjct: 199 RRDVVSWTAMVDGLAK-------NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 163 GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNG 222
+F + + SW MI+G+ R+ ++A LF P KN+ +WT +I+G V++
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 223 VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNA 282
+A F KM ++G + S++ AC++LA G+Q+H L+ ++ +++A
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 283 LVDMYAKCSDLVAAKYIFCE--MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
L++MY+K +L+AA+ +F + ++D++SW S+I A HG +EA+ +Y+ M K
Sbjct: 372 LLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFK 431
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
P+ VT++ L++ACS+ GLV KG F+ +V D + +HYTCL+DL R+G L + N
Sbjct: 432 PSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTN 491
Query: 401 LIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASM 460
I + A+LSAC H +A + K+L +D +Y+L+SN+YA
Sbjct: 492 FINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGK 551
Query: 461 WENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRK 520
E +++R M K +KK+PG S + +GK++H+F G+ SHP + + ++ L +MRK
Sbjct: 552 REEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Query: 521 RGYV 524
V
Sbjct: 612 NKNV 615
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 184/426 (43%), Gaps = 77/426 (18%)
Query: 42 PFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQ 101
P P L+ K G + +A +LFD LP RD+V+W V++
Sbjct: 47 PQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVIT--------------------- 85
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
G + + ++ F + V + +V Y +
Sbjct: 86 -------------------GYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLS 126
Query: 162 YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGN 221
+F + N +SW MI GYA+SGR +AL LF E P +N+ +W +++ LVQ G
Sbjct: 127 IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGR 186
Query: 222 GVDAFYTFVKMRQEGIT----IADPLVLSSVVGAC---------ANLAVWELGKQVHGLV 268
+A F +M + + + D L + V N+ W + ++
Sbjct: 187 IDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISW------NAMI 240
Query: 269 IGLGYESCV--------------FIS-NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
G + + F S N ++ + + ++ A +F M K+V+SWT+
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTT 300
Query: 314 IIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
+I G ++ + EEAL ++ M+ VKPN T+V ++ ACS++ + +G+ + + + +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT-MPVSPDEPTWAALLSACKHHGNTQMAV 431
K + + LL+++S+SG L A + + D +W ++++ HHG+ + A+
Sbjct: 361 VHQKNEIV-TSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 432 RIADKL 437
+ +++
Sbjct: 420 EMYNQM 425
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 245/462 (53%), Gaps = 34/462 (7%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K++H +KSGL ++L Y KCG L+++ +LF +P +D WAS++S N
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
A+ + +L G PD + ++ C++ L +GK++H + L +
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLP--RGKEIHGYTLRAGIDKG 585
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ S LV+MY+K G R V+D + L+ +S +++ISGY++ G + LFR+
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRD--- 642
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+V SG +D+F +SS++ A A LG Q
Sbjct: 643 ------------MVMSGFTMDSF-----------------AISSILKAAALSDESSLGAQ 673
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VH + +G + + ++L+ MY+K + F +++ D+++WT++I AQHG+
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
A EAL +Y+ M KP++VTFVG++ ACS+ GLV + SMV+DYGI+P +HY
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++D RSG L EAE+ I M + PD W LL+ACK HG ++ A K + L+P
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPS 853
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
D +YI LSN+ A W+ V + RKLM V+KEPG+S +
Sbjct: 854 DAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 190/407 (46%), Gaps = 47/407 (11%)
Query: 26 KKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
K + A++IK G + F T ++D Y KCG + +A+++F +P+ +VSW +LS
Sbjct: 271 KVVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK 328
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+N AL I + + H G + ++ +++I AC P V + QVHA S + D
Sbjct: 329 SNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR--PSMVCEASQVHAWVFKSGFYLDS 386
Query: 145 VVKSTLVDMYAKFGLPDYGRAVF---DSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
V + L+ MY+K G D VF D I N ++ MI+ +++S + +A+RL
Sbjct: 387 SVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRL---- 440
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
F +M QEG+ D + S++ L LG
Sbjct: 441 ---------------------------FTRMLQEGLR-TDEFSVCSLLSV---LDCLNLG 469
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
KQVHG + G + + ++L +Y+KC L + +F + KD W S+I G ++
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G EA+ L+ +M+ P+E T ++ CS+ + +G+ + + GI +
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDL 588
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
+ L++++S+ G L A + +P D + ++L+S HG Q
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQHGLIQ 634
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 186/416 (44%), Gaps = 39/416 (9%)
Query: 25 TKKLHAQIIKSGLSQHEPF-PNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
TK L A +++ L + F +LL Y G + DA +LFDT+P D+VS ++S
Sbjct: 67 TKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM-GPLHVNQGKQVHAHFLLSPYAN 142
L +L + GF+ + + ++I AC+ + PL + V H + Y
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLF---SELVCCHTIKMGYFF 183
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
+VV+S L+D+++K + R +A ++FR+S
Sbjct: 184 YEVVESALIDVFSK-------------------------------NLRFEDAYKVFRDSL 212
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
N++ W +I+G +++ N F F +M G D SSV+ ACA+L GK
Sbjct: 213 SANVYCWNTIIAGALRNQNYGAVFDLFHEMCV-GFQKPDSYTYSSVLAACASLEKLRFGK 271
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
V VI G E VF+ A+VD+YAKC + A +F + VVSWT ++ G +
Sbjct: 272 VVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
A AL ++ +M + V+ N T +I AC +V + + + V G
Sbjct: 331 DAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV-HAWVFKSGFYLDSSVA 389
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
L+ ++S+SG +D +E + + + ++++ A+R+ ++L
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRML 445
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 200/430 (46%), Gaps = 57/430 (13%)
Query: 18 ARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWAS 77
A Q+P ++ + IK G +E + L+D + K +DA ++F ++ W +
Sbjct: 162 ALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNT 221
Query: 78 VLSACNLANLPHRALSISRSLLHQ---GFQ-PDHFVFSTLIKACANMGPLHVNQGKQVHA 133
+++ L N + A+ L H+ GFQ PD + +S+++ ACA++ L GK V A
Sbjct: 222 IIAGA-LRNQNYGAV---FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRF--GKVVQA 275
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
++ A D V + +VD+YAK G VF I + + +SWT M+SGY +S
Sbjct: 276 R-VIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFS 334
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
AL +F+E MR G+ I + V +SV+ AC
Sbjct: 335 ALEIFKE-------------------------------MRHSGVEINNCTV-TSVISACG 362
Query: 254 NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM---SRKDVVS 310
++ QVH V G+ ++ AL+ MY+K D+ ++ +F ++ R+++V+
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN 422
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL--IYACSNVGLVSKGRALFRS 368
+I +Q + +A+ L+ M+ ++ +E + L + C N+G G L
Sbjct: 423 --VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSG 480
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
+V D + S L L+S+ G L+E+ L + +P D WA+++S +G +
Sbjct: 481 LVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPF-KDNACWASMISGFNEYGYLR 533
Query: 429 MAVRIADKLL 438
A+ + ++L
Sbjct: 534 EAIGLFSEML 543
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 249/478 (52%), Gaps = 42/478 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ LHA ++ SG+++ L+ Y +CG + DA ++FD +P RD+ ++ AC
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARN 95
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+L R + G + D F+ +L+KA N+ L GK +H L Y +D
Sbjct: 96 GYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNL--LDREFGKMIHCLVLKFSYESDAF 153
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE----- 200
+ S+L+DMY+KFG R VF + + + + AMISGYA + + EAL L ++
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 201 ---------------------------------SPYK-NLFAWTALISGLVQSGNGVDAF 226
YK ++ +WT++ISGLV + AF
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 227 YTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDM 286
F +M G+ + + +++ AC LA + GK++HG + G E F+ +AL+DM
Sbjct: 274 DAFKQMLTHGL-YPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDM 332
Query: 287 YAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTF 346
Y KC + A +F + +K V++ S+I A HG A++A+ L+D M + K + +TF
Sbjct: 333 YGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTF 392
Query: 347 VGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP 406
++ ACS+ GL G+ LF M Y I P L+HY C++DL R+G L EA +I+ M
Sbjct: 393 TAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMR 452
Query: 407 VSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
+ PD W ALL+AC++HGN ++A A L L+PE+ + +LL+++YA A WE+V
Sbjct: 453 MEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 36/298 (12%)
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
+G+ +HAH + S A + + LV Y + G R VFD + + MI A
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
R+G E+L FRE M ++G+ + D ++
Sbjct: 94 RNGYYQESLDFFRE-------------------------------MYKDGLKL-DAFIVP 121
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
S++ A NL E GK +H LV+ YES FI ++L+DMY+K ++ A+ +F ++ +
Sbjct: 122 SLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ 181
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
D+V + ++I G A + QA+EAL L DM +KP+ +T+ LI S++ K +
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSAC 421
M D G KP + +T ++ + ++A + + M + P+ T LL AC
Sbjct: 242 ELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 258/506 (50%), Gaps = 35/506 (6%)
Query: 6 HAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
+ +A+ + + RQ + K +H +I G N+L Y +CG +QD L LF+
Sbjct: 210 YTFAIALKACAGLRQVKY-GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFE 268
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV 125
+ RD+VSW S++ A +A+ + + P+ F+++ ACA++ L
Sbjct: 269 NMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV- 327
Query: 126 NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGY 185
G+Q+H + L GL D S+S NS M+ Y
Sbjct: 328 -WGEQLHCNVL-------------------SLGLND-------SLSVSNS-----MMKMY 355
Query: 186 ARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
+ G A LF+ +++ +W+ +I G Q+G G + F F MRQ G D L
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD-FAL 414
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
+S++ N+AV E G+QVH L + G E + ++L++MY+KC + A IF E R
Sbjct: 415 ASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDR 474
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
D+VS T++I G A+HG+++EA+ L++ + +P+ VTF+ ++ AC++ G + G
Sbjct: 475 DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHY 534
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
F M E Y ++P+ +HY C++DL R+G L +AE +I M D+ W LL ACK G
Sbjct: 535 FNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKG 594
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
+ + R A+++L L P ++ + L+N+Y+ E + VRK M K V KEPG+S I
Sbjct: 595 DIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSI 654
Query: 486 DLGKESHVFYAGETSHPMKDEILGLM 511
+ F +G+ HP ++I ++
Sbjct: 655 KIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 185/378 (48%), Gaps = 40/378 (10%)
Query: 44 PNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSL--LHQ 101
PN+ L + G L+ A Q+FD +PH D+VSW S++ AN AL + ++ +
Sbjct: 43 PNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDH 102
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
PD V S ++KAC ++ G+ +HA+ + + + V S+L+DMY + G D
Sbjct: 103 AVSPDTSVLSVVLKACGQSS--NIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 162 YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGN 221
++ R+F E P++N WTA+I+GLV +G
Sbjct: 161 -------------------------------KSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 222 GVDAFYTFVKM-RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFIS 280
+ F +M R E ++D + + ACA L + GK +H VI G+ + + ++
Sbjct: 190 YKEGLTYFSEMSRSE--ELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 281 NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
N+L MY +C ++ +F MS +DVVSWTS+IV + GQ +A+ + M +++V
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
PNE TF + AC+++ + G L V G+ SL ++ ++S G+L A
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQL-HCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 401 LIRTMPVSPDEPTWAALL 418
L + M D +W+ ++
Sbjct: 367 LFQGMRCR-DIISWSTII 383
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA-DPLVLS 246
+G A ++F + P+ ++ +WT++I V + N +A F MR ++ D VLS
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
V+ AC + G+ +H + S V++ ++L+DMY + + + +F EM +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
+ V+WT+II G G+ +E L + +M + + TF + AC+ + V G+A+
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
++ G +L L +++ G + + L M D +W +L+ A K G
Sbjct: 233 THVIVR-GFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQ 290
Query: 427 TQMAVRIADKL 437
AV K+
Sbjct: 291 EVKAVETFIKM 301
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 274/522 (52%), Gaps = 43/522 (8%)
Query: 3 LSRHAYALKSQLSS--VARQSPFLTK--KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQ 58
L+ YAL S L + + F+ K +H K G+ LLD Y K G L+
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 59 DALQLFDTLPHRDLVSWASVLSA-CNLANLPHRALSISRSLL----HQGFQPDHFVFSTL 113
+A++LF +P +++V++ +++S + + A S + L +G +P FS +
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 114 IKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL 173
+KAC+ L G+Q+HA + + +D+ + S L+++YA G + G F S S
Sbjct: 365 LKACSAAKTLEY--GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMR 233
+ SWT+MI + ++ + A LFR+ LF+ +R
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQ-----LFS---------------------SHIR 456
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
E T+ S ++ ACA+ A G+Q+ G I G ++ + + + MYAK ++
Sbjct: 457 PEEYTV------SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 294 VAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYAC 353
A +F E+ DV +++++I AQHG A EAL +++ M + +KPN+ F+G++ AC
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
+ GLV++G F+ M DY I P+ +H+TCL+DL R+G L +AENLI + T
Sbjct: 571 CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT 630
Query: 414 WAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMV 473
W ALLS+C+ + ++ + R+A++L+ L+PE SY+LL N+Y + + + +VR+LM
Sbjct: 631 WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRD 690
Query: 474 KEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLD 515
+ VKKEP S I +G ++H F + SHP I ++ +D
Sbjct: 691 RGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 200/424 (47%), Gaps = 48/424 (11%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + LH ++ +GLSQ N L+D Y KCG L A+ LFD RD VSW S++S
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA-NMGPLHVNQGKQVHAHFLLSPYAN 142
L++ + G + +++KAC N+ + +G +H +
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
D VV++ L+DMYAK +G EA++LF P
Sbjct: 286 DIVVRTALLDMYAK-------------------------------NGSLKEAIKLFSLMP 314
Query: 203 YKNLFAWTALISGLVQSGNGVD-----AFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
KN+ + A+ISG +Q D AF F+ M++ G+ P S V+ AC+
Sbjct: 315 SKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE-PSPSTFSVVLKACSAAKT 373
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
E G+Q+H L+ ++S FI +AL+++YA F S++D+ SWTS+I
Sbjct: 374 LEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDC 433
Query: 318 TAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
Q+ Q E A L+ + S+ ++P E T ++ AC++ +S G ++ Y IK
Sbjct: 434 HVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE-----QIQGYAIKS 488
Query: 378 SLQHYTCL----LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+ +T + + ++++SG++ A N + +PD T++A++S+ HG+ A+ I
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLA-NQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 434 ADKL 437
+ +
Sbjct: 548 FESM 551
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 191/442 (43%), Gaps = 75/442 (16%)
Query: 21 SPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLS 80
S L K H +IKS L+ N LL+ Y KC L A QLFD +P R+++S+ S++S
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 81 ACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY 140
+A+ + + D F ++ + C L + G+ +H +++
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDL--GELLHGLVVVNGL 179
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
+ + + L+DMY+K G D ++FD + +SW ++ISGY R G E L L
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNL--- 236
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA---NLAV 257
KM ++G+ + L SV+ AC N
Sbjct: 237 ----------------------------LAKMHRDGLNLT-TYALGSVLKACCINLNEGF 267
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
E G +H LG E + + AL+DMYAK L A +F M K+VV++ ++I G
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 318 TAQHGQ-----AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL------- 365
Q + + EA L+ DM ++P+ TF ++ ACS + GR +
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 366 -FRS-------MVEDYGI---------------KPSLQHYTCLLDLFSRSGHLDEAENLI 402
F+S ++E Y + K + +T ++D ++ L+ A +L
Sbjct: 388 NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Query: 403 RTM---PVSPDEPTWAALLSAC 421
R + + P+E T + ++SAC
Sbjct: 448 RQLFSSHIRPEEYTVSLMMSAC 469
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 240/462 (51%), Gaps = 35/462 (7%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H +K+GL + + +L++ Y + G ++ A ++FD +P R+ V W ++ +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND-DVV 146
+ + G D L+KAC N+ V GK VH + + + D +
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKV--GKCVHGVSIRRSFIDQSDYL 248
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
+++++DMY K L D R +LF S +N+
Sbjct: 249 QASIIDMYVKCRLLDNAR-------------------------------KLFETSVDRNV 277
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
WT LISG + V+AF F +M +E I + + L++++ +C++L GK VHG
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESI-LPNQCTLAAILVSCSSLGSLRHGKSVHG 336
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
+I G E + +DMYA+C ++ A+ +F M ++V+SW+S+I +G EE
Sbjct: 337 YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEE 396
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
AL + M S V PN VTFV L+ ACS+ G V +G F SM DYG+ P +HY C++
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
DL R+G + EA++ I MPV P W ALLSAC+ H +A IA+KLL ++PE S
Sbjct: 457 DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSS 516
Query: 447 SYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLG 488
Y+LLSN+YA A MWE V+ VR+ M +K +K G S ++G
Sbjct: 517 VYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 203/448 (45%), Gaps = 84/448 (18%)
Query: 25 TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP--HRDLVSWASVLSA- 81
T+++HA++I G ++L +AY + L A F+ +P R+ SW ++LS
Sbjct: 23 TQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGY 82
Query: 82 -----CNLANLPHRALSISRSLLH-QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHF 135
C +++ L +R H G + VF+ IKAC +G L G +H
Sbjct: 83 SKSKTCCYSDV---LLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLE--NGILIHGLA 135
Query: 136 LLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEAL 195
+ + DD V +LV+MYA+ G + + VFD I NS+ W ++ GY + + E
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 196 RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
RL F MR G+ + D L L +V AC N+
Sbjct: 196 RL-------------------------------FCLMRDTGLAL-DALTLICLVKACGNV 223
Query: 256 AVWELGKQVHGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
++GK VHG+ I + + ++ +++DMY KC L A+ +F ++VV WT++
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
I G A+ +A EA L+ M+ + PN+ T ++ +CS++G + G+++ M+ + G
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-G 342
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---------------------------- 406
I+ ++T +D+++R G++ A + MP
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 407 ------VSPDEPTWAALLSACKHHGNTQ 428
V P+ T+ +LLSAC H GN +
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 33/298 (11%)
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS--SLNSISWTAMI 182
+N +QVHA ++ + ++ V+ S+L + Y + D+ + F+ I N SW ++
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 183 SGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
SGY++S + Y ++ L + + + +GVD+F
Sbjct: 80 SGYSKS----------KTCCYSDVLL---LYNRMRRHCDGVDSFN--------------- 111
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
L + AC L + E G +HGL + G + +++ +LV+MYA+ + +A+ +F E
Sbjct: 112 --LVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDE 169
Query: 303 MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
+ ++ V W ++ G ++ + E L+ M + + +T + L+ AC NV G
Sbjct: 170 IPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVG 229
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
+ + + I S ++D++ + LD A L T V + W L+S
Sbjct: 230 KCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISG 286
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K +H +I++G+ + +D Y +CG +Q A +FD +P R+++SW+S+++A +
Sbjct: 332 KSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGIN 391
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG-KQVHAHFLLSPYANDD 144
L AL + Q P+ F +L+ AC++ G +V +G KQ + ++
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG--NVKEGWKQFESMTRDYGVVPEE 449
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSIS-WTAMISG 184
+ +VD+ + G ++ D++ S W A++S
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 246/447 (55%), Gaps = 15/447 (3%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N +L+ Y K GL++ A +LFD + +D+VSW +++ C N AL +L G +
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYA-----KFGL 159
P + L+ A A + ++G Q+H + + D +++T++ YA K L
Sbjct: 303 PSEVMMVDLLSASAR--SVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLAL 360
Query: 160 PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQS 219
+ +V D I+S N A+I+G+ ++G +A +F ++ K++F+W A+ISG QS
Sbjct: 361 QQFEASVKDHIASRN-----ALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 220 GNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFI 279
+ A + F +M D + + SV A ++L E GK+ H + +
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 280 SNALVDMYAKCSDLVAAKYIFCE---MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS 336
+ A++DMYAKC + A IF + +S + W +II G+A HG A+ AL LY D+ S
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 337 ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
+KPN +TFVG++ AC + GLV G+ F SM D+GI+P ++HY C++DL ++G L+
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 595
Query: 397 EAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYA 456
EA+ +I+ MPV D W LLSA + HGN ++A A +L + P ++LSNVYA
Sbjct: 596 EAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYA 655
Query: 457 GASMWENVSKVRKLMMVKEVKKEPGYS 483
A WE+V+ VR+ M ++V+ +S
Sbjct: 656 DAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 231/513 (45%), Gaps = 87/513 (16%)
Query: 9 ALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDA------- 60
AL S L S A + +++H +++KSGL + N++L+ Y KC LL DA
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 61 ------------------------LQLFDTLPHRDLVSWASVLSACNLANLPHRALSISR 96
L+LFD +P R VS+ +++ N A+ + R
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 97 SLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAK 156
+ + G + +T+I AC+++G + + + + + V + L+ MY
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIW--DCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 157 FGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGL 216
R +FD + N ++W M++GY+++G +A LF + K++ +W +I G
Sbjct: 221 CLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGC 280
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
++ +A + +M + G+ ++ +++ ++ A A G Q+HG ++ G++
Sbjct: 281 LRKNQLDEALVYYTEMLRCGMKPSEVMMV-DLLSASARSVGSSKGLQLHGTIVKRGFDCY 339
Query: 277 VFISNALVDMYAKCSD---------------------LVA----------AKYIFCEMSR 305
F+ ++ YA +D L+A A+ +F +
Sbjct: 340 DFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRA 364
KD+ SW ++I G AQ + AL L+ +M+ S++VKP+ +T V + A S++G + +G+
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 365 LFRSMVEDY----GIKPSLQHYTCLLDLFSRSGHLDEAENL------IRTMPVSPDEPTW 414
DY I P+ ++D++++ G ++ A N+ I + +SP W
Sbjct: 460 -----AHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----W 510
Query: 415 AALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
A++ HG+ ++A+ + L L P P+S
Sbjct: 511 NAIICGSATHGHAKLALDLYSDLQSL-PIKPNS 542
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 268/500 (53%), Gaps = 38/500 (7%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL-PHRDLVSWASVLSAC 82
L K++HA+++K GL N ++ +Y CG + DA ++FD L +DL+SW S+++
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGF 280
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ L A + + + D + ++ L+ AC+ G H GK +H +
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS--GEEHQIFGKSLHGMVIKKGLEQ 338
Query: 143 DDVVKSTLVDMYAKF--GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
+ L+ MY +F G + ++F+S+ S + ISW ++I+G+A+ G +A++ F
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS- 397
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
+R I + D S+++ +C++LA +L
Sbjct: 398 ------------------------------YLRSSEIKV-DDYAFSALLRSCSDLATLQL 426
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK-DVVSWTSIIVGTA 319
G+Q+H L G+ S F+ ++L+ MY+KC + +A+ F ++S K V+W ++I+G A
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
QHG + +L L+ M + VK + VTF ++ ACS+ GL+ +G L M Y I+P +
Sbjct: 487 QHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRM 546
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
+HY +DL R+G +++A+ LI +MP++PD L C+ G +MA ++A+ LL
Sbjct: 547 EHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE 606
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGET 499
++PED +Y+ LS++Y+ WE + V+K+M + VKK PG+S I++ + F A +
Sbjct: 607 IEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDR 666
Query: 500 SHPMKDEILGLMRKLDAEMR 519
S+P+ +I +++ L EM+
Sbjct: 667 SNPLCQDIYMMIKDLTQEMQ 686
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 38/408 (9%)
Query: 29 HAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLP 88
H IK G N +LD+Y K G L A LFD +P RD VSW +++S
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 89 HRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKS 148
A + + G D + FS L+K A++ + G+QVH + Y + V S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDL--GEQVHGLVIKGGYECNVYVGS 140
Query: 149 TLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFA 208
+LVDMYAK R +A F+E N +
Sbjct: 141 SLVDMYAK-------------------------------CERVEDAFEAFKEISEPNSVS 169
Query: 209 WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLV 268
W ALI+G VQ + AF+ M + D + ++ + L KQVH V
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV 229
Query: 269 IGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM-SRKDVVSWTSIIVGTAQHGQAEEA 327
+ LG + + I NA++ YA C + AK +F + KD++SW S+I G ++H E A
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
L+ M V+ + T+ GL+ ACS G++L MV G++ L+
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL-HGMVIKKGLEQVTSATNALIS 348
Query: 388 LFSR--SGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
++ + +G +++A +L ++ S D +W ++++ G ++ AV+
Sbjct: 349 MYIQFPTGTMEDALSLFESLK-SKDLISWNSIITGFAQKGLSEDAVKF 395
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 194/436 (44%), Gaps = 40/436 (9%)
Query: 7 AYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
Y+ L +A F L +++H +IK G + ++L+D Y KC ++DA + F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 66 TLPHRDLVSWASVLSA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ + VSW ++++ + ++ + + D F+ L+ + P+
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDD--PMF 218
Query: 125 VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI-SSLNSISWTAMIS 183
N KQVHA L ++ + + ++ YA G + VFD + S + ISW +MI+
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 184 GYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
G+++ + A L F++M++ + D
Sbjct: 279 GFSKHELKESAFEL-------------------------------FIQMQRHWVE-TDIY 306
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK--CSDLVAAKYIFC 301
+ ++ AC+ GK +HG+VI G E +NAL+ MY + + A +F
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE 366
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
+ KD++SW SII G AQ G +E+A+ + + S+ +K ++ F L+ +CS++ +
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
G+ + ++ G + + L+ ++S+ G ++ A + + W A++
Sbjct: 427 GQQI-HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 422 KHHGNTQMAVRIADKL 437
HG Q+++ + ++
Sbjct: 486 AQHGLGQVSLDLFSQM 501
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGR 190
H + + +D V + ++D Y KFG Y +FD + +S+SW MISGY G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 191 RSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVG 250
+A LF + + +SG+ VD Y+F S ++
Sbjct: 82 LEDAWCLF---------------TCMKRSGSDVDG-YSF----------------SRLLK 109
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
A++ ++LG+QVHGLVI GYE V++ ++LVDMYAKC + A F E+S + VS
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 311 WTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
W ++I G Q + A L M + A V + TF L+ + + + + +
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV-HAK 228
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHH 424
V G++ + ++ ++ G + +A+ + + S D +W ++++ H
Sbjct: 229 VLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 249/497 (50%), Gaps = 38/497 (7%)
Query: 15 SSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH--RDL 72
S+ +S L + +HA I+ G+ NT + YGKCG L A +F+ + R +
Sbjct: 162 SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV 221
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
VSW S+ A ++ A + +L + F+PD F L +C N P + QG+ +H
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN--PETLTQGRLIH 279
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
+H + D +T + MY+K R +FD ++S +S
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS--------------- 324
Query: 193 EALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
WT +ISG + G+ +A F M + G D + L S++ C
Sbjct: 325 ----------------WTVMISGYAEKGDMDEALALFHAMIKSG-EKPDLVTLLSLISGC 367
Query: 253 ANLAVWELGKQVHGLVIGLGYE-SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSW 311
E GK + G + V I NAL+DMY+KC + A+ IF K VV+W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
T++I G A +G EAL L+ M+ KPN +TF+ ++ AC++ G + KG F M +
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
Y I P L HY+C++DL R G L+EA LIR M PD W ALL+ACK H N ++A
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 432 RIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKES 491
+ A+ L L+P+ + Y+ ++N+YA A MW+ +++R +M + +KK PG S I + ++
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 492 HVFYAGETSHPMKDEIL 508
H F GE H +++E++
Sbjct: 608 HSFTVGEHGH-VENEVI 623
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 181/398 (45%), Gaps = 48/398 (12%)
Query: 66 TLPHRDL--VSWASVLSACNLA-------NLPHRALSISRSLLHQGFQPDHFVFSTLIKA 116
+L HR L +S S ++A NL N P +L + R + GF+P++F F + KA
Sbjct: 2 SLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKA 61
Query: 117 CANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI 176
CA + V + VHAH + SP+ +D V + VDM+ K DY VF+ + ++
Sbjct: 62 CARLAD--VGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 177 SWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
+W AM+SG+ +SG +A LFRE MR
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFRE-------------------------------MRLNE 148
Query: 237 ITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAA 296
IT D + + +++ + + +L + +H + I LG + V ++N + Y KC DL +A
Sbjct: 149 IT-PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA 207
Query: 297 KYIFCEMSRKD--VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS 354
K +F + R D VVSW S+ + G+A +A LY M+ KP+ TF+ L +C
Sbjct: 208 KLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ 267
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTW 414
N +++GR L S G ++ + ++S+S A L M S +W
Sbjct: 268 NPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIM-TSRTCVSW 325
Query: 415 AALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLS 452
++S G+ A+ + ++ E P LLS
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMI-KSGEKPDLVTLLS 362
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 217/503 (43%), Gaps = 65/503 (12%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+HA +IKS +D + KC + A ++F+ +P RD +W ++LS +
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+A S+ R + PD TLI++ + L + + +HA + V
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA--MHAVGIRLGVDVQVTVA 191
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNS--ISWTAMISGYARSGRRSEALRLFRESPYKN 205
+T + Y K G D + VF++I + +SW +M Y+ +F
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS----------VF------- 234
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
G DAF + M +E D ++ +C N G+ +H
Sbjct: 235 --------------GEAFDAFGLYCLMLREEFK-PDLSTFINLAASCQNPETLTQGRLIH 279
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
I LG + + N + MY+K D +A+ +F M+ + VSWT +I G A+ G +
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK-PSLQHYTC 384
EALAL+ M+ + KP+ VT + LI C G + G+ + + + YG K ++
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI-DARADIYGCKRDNVMICNA 398
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL--KP 442
L+D++S+ G + EA ++ P TW +++ +G A+++ K++ L KP
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 443 EDPSSYILLSNVYAGASM---WENVSKVRKLMMVKEVKKEPG---YSC-ID-LGKESHVF 494
+ +L S+ WE ++++ + PG YSC +D LG++ +
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS-----PGLDHYSCMVDLLGRKGKL- 511
Query: 495 YAGETSHPMKDEILGLMRKLDAE 517
+E L L+R + A+
Sbjct: 512 ----------EEALELIRNMSAK 524
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 257/496 (51%), Gaps = 7/496 (1%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLD--AYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
K+H +I GLS+ EPF + L A G + A + L W V+ +
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ P +++S+ +L G PDH + L+K+ + + + G +H + S D
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKL--GGSLHCSVVKSGLEWDL 143
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
+ +TL+ MY F R +FD + N ++W +++ YA+SG A +F E +
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
++ W+++I G V+ G A F +M + G + A+ + + SV+ ACA+L GK V
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV 263
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK--DVVSWTSIIVGTAQHG 322
H ++ + V + +L+DMYAKC + A +F S K D + W +II G A HG
Sbjct: 264 HRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
E+L L+ M +++ P+E+TF+ L+ ACS+ GLV + F+S+ E G +P +HY
Sbjct: 324 FIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHY 382
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C++D+ SR+G + +A + I MP+ P ALL+ C +HGN ++A + KL+ L+P
Sbjct: 383 ACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQP 442
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
+ Y+ L+NVYA + +R+ M K VKK G+S +DL H F A + +H
Sbjct: 443 HNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHF 502
Query: 503 MKDEILGLMRKLDAEM 518
D+I +++ A M
Sbjct: 503 HSDKIYAVLQLTGAWM 518
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 271/518 (52%), Gaps = 40/518 (7%)
Query: 9 ALKSQLSSVARQSPFLTK-KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL 67
++ S +++ R S L +LHA +IK G + NTL+D Y KC L + F +
Sbjct: 388 SMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM 447
Query: 68 PHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQ 127
+DL+SW +V++ + AL + R + + + D + ++++A + + + +
Sbjct: 448 HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV- 506
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
K++H H L D V+++ LVD+Y K Y VF+SI + +SWT+MIS A
Sbjct: 507 -KEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
+G SEA+ LFR +M + G++ AD + L
Sbjct: 565 NGNESEAVELFR-------------------------------RMVETGLS-ADSVALLC 592
Query: 248 VVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD 307
++ A A+L+ G+++H ++ G+ I+ A+VDMYA C DL +AK +F + RK
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFR 367
++ +TS+I HG + A+ L+D M V P+ ++F+ L+YACS+ GL+ +GR +
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712
Query: 368 SMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNT 427
M +Y ++P +HY CL+D+ R+ + EA ++ M P W ALL+AC+ H
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEK 772
Query: 428 QMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDL 487
++ A +LL L+P++P + +L+SNV+A W +V KVR M ++K PG S I++
Sbjct: 773 EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Query: 488 GKESHVFYAGETSHPMKDEIL----GLMRKLDAEMRKR 521
+ H F A + SHP EI + RKL+ E KR
Sbjct: 833 DGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKGKR 870
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 181/369 (49%), Gaps = 38/369 (10%)
Query: 26 KKLHAQIIKSGLSQHEPF-PNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
++LH++I K+ S F L+ YGKCG L DA ++FD +P R +W +++ A
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
P AL++ ++ +G F L+KACA + + G ++H+ + Y +
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL--RDIRSGSELHSLLVKLGYHSTG 217
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSL-NSISWTAMISGYARSGRRSEALRLFRESPY 203
+ + LV MYAK R +FD +++ W +++S Y+ SG+ E L LFRE
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFRE--- 274
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ +G ++ YT V S + AC + +LGK+
Sbjct: 275 ------------MHMTGPAPNS-YTIV----------------SALTACDGFSYAKLGKE 305
Query: 264 VHGLVI-GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+H V+ + S +++ NAL+ MY +C + A+ I +M+ DVV+W S+I G Q+
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+EAL + DM++A K +EV+ +I A + + G L +++ +G +LQ
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK-HGWDSNLQVG 424
Query: 383 TCLLDLFSR 391
L+D++S+
Sbjct: 425 NTLIDMYSK 433
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 134/299 (44%), Gaps = 41/299 (13%)
Query: 125 VNQGKQVHAH-FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMIS 183
V+QG+Q+H+ F P D + LV MY K G D VFD
Sbjct: 96 VSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD--------------- 140
Query: 184 GYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
E P + FAW +I V +G A + MR EG+ PL
Sbjct: 141 ----------------EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV----PL 180
Query: 244 VLSS---VVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
LSS ++ ACA L G ++H L++ LGY S FI NALV MYAK DL AA+ +F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 301 CEMSRK-DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
K D V W SI+ + G++ E L L+ +M PN T V + AC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
G+ + S+++ L L+ +++R G + +AE ++R M + D TW +L+
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 188/413 (45%), Gaps = 37/413 (8%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR-DLVSWASVLSACNLA 85
+LH+ ++K G N L+ Y K L A +LFD + D V W S+LS+ + +
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L + R + G P+ + + + AC G + GK++HA L S
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACD--GFSYAKLGKEIHASVLKS------- 313
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
S S A+I+ Y R G+ +A R+ R+ +
Sbjct: 314 -----------------------STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNAD 350
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ W +LI G VQ+ +A F M G +D + ++S++ A L+ G ++H
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK-SDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
VI G++S + + N L+DMY+KC+ F M KD++SWT++I G AQ+
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EAL L+ D+ R++ +E+ ++ A S + + + + ++ + +Q+ L
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE--L 527
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+D++ + ++ A + ++ D +W +++S+ +GN AV + +++
Sbjct: 528 VDVYGKCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMV 579
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 30/293 (10%)
Query: 248 VVGACANLAVWELGKQVHGLVIGL--GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
V+ C G+Q+H + +E F++ LV MY KC L A+ +F EM
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFE-LDFLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
+ +W ++I +G+ ALALY +M V +F L+ AC+ + + G L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
S++ G + L+ +++++ L A L D W ++LS+ G
Sbjct: 205 -HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
+ + + ++ P P+SY ++S + A G+S
Sbjct: 264 KSLETLELFREMHMTGPA-PNSYTIVSALTAC----------------------DGFSYA 300
Query: 486 DLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQE 538
LGKE H ++H + L + L A + G +P +L M+ +
Sbjct: 301 KLGKEIHASVLKSSTHSSE---LYVCNALIAMYTRCGKMPQAERILRQMNNAD 350
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 269/527 (51%), Gaps = 7/527 (1%)
Query: 2 SLSRHAYALKSQ-LSSVARQSPFLT--KKLHAQIIKSG-LSQHEPFPNTLLDAYGKCGLL 57
S+ RH + Q + + S FL+ K++H II SG LS N+L+ Y + G
Sbjct: 123 SMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNF 182
Query: 58 QDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKAC 117
A ++F +PH D+ S+ ++ AL + ++ G +PD + +L+ C
Sbjct: 183 GVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCC 242
Query: 118 ANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSIS 177
++ + + +G Y+++ ++ + L+DMY K + FD++ + S
Sbjct: 243 GHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRS 302
Query: 178 WTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSG-NGVDAFYTFVKMRQEG 236
W M+ G+ R G A +F + P ++L +W +L+ G + G + F +M
Sbjct: 303 WNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVE 362
Query: 237 ITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAA 296
D + + S++ AN G+ VHGLVI L + F+S+AL+DMY KC + A
Sbjct: 363 KVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERA 422
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+F + KDV WTS+I G A HG ++AL L+ M V PN VT + ++ ACS+
Sbjct: 423 FMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHS 482
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI-RTMPVSPDEPTWA 415
GLV +G +F M + +G P +HY L+DL R+G ++EA++++ + MP+ P + W
Sbjct: 483 GLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWG 542
Query: 416 ALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
++LSAC+ + + A +LL L+PE Y+LLSN+YA W K R+ M +
Sbjct: 543 SILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRG 602
Query: 476 VKKEPGYSCIDLGKESHVFYAGE-TSHPMKDEILGLMRKLDAEMRKR 521
VKK GYS + + H F A E +HP EI +++ L EM+ +
Sbjct: 603 VKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPK 649
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 244/437 (55%), Gaps = 8/437 (1%)
Query: 54 CGLLQD---ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVF 110
CG L + A ++F + + +++ + +++ +L P +LS S+ +G D + +
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 111 STLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI 170
+ L+K+C+++ L GK VH + + + ++ +V++Y G + VFD +
Sbjct: 106 APLLKSCSSLSDLRF--GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
S N + W MI G+ SG L LF++ +++ +W ++IS L + G +A F
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG-YESCVFISNALVDMYAK 289
+M +G D + +V+ A+L V + GK +H G ++ + + NALVD Y K
Sbjct: 224 EMIDQGFD-PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCK 282
Query: 290 CSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVG 348
DL AA IF +M R++VVSW ++I G+A +G+ E + L+D M+ +V PNE TF+G
Sbjct: 283 SGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLG 342
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
++ CS G V +G LF M+E + ++ +HY ++DL SRSG + EA ++ MPV+
Sbjct: 343 VLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN 402
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVR 468
+ W +LLSAC+ HG+ ++A A +L+ ++P + +Y+LLSN+YA W++V KVR
Sbjct: 403 ANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVR 462
Query: 469 KLMMVKEVKKEPGYSCI 485
LM ++K G S I
Sbjct: 463 TLMKKNRLRKSTGQSTI 479
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 139/341 (40%), Gaps = 66/341 (19%)
Query: 130 QVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSG 189
++HAH L +++ + + + DY VF I + N + + AMI Y+ G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 190 RRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV 249
E+L F M+ GI AD + ++
Sbjct: 82 PPLESLSFFS-------------------------------SMKSRGIW-ADEYTYAPLL 109
Query: 250 GACANLAVWELGKQVHGLVIGLGY-------------------------------ESCVF 278
+C++L+ GK VHG +I G+ E V
Sbjct: 110 KSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVV 169
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
+ N ++ + D+ ++F +MS + +VSW S+I ++ G+ EAL L+ +M+
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 339 VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI-KPSLQHYTCLLDLFSRSGHLDE 397
P+E T V ++ +++G++ G+ + S E G+ K + L+D + +SG L+
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWI-HSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 398 AENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
A + R M + +W L+S +G + + + D ++
Sbjct: 289 ATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDAMI 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 38/300 (12%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N ++ + G ++ L LF + R +VSW S++S+ + AL + ++ QGF
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV-VKSTLVDMYAKFGLPDYG 163
PD T++ A++G L + GK +H+ S D + V + LVD Y K G +
Sbjct: 232 PDEATVVTVLPISASLGVL--DTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
A+F + N +SW +ISG A +G+ + LF
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLF------------------------- 324
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIG-LGYESCVFISNA 282
DA M +EG + V+ C+ E G+++ GL++ E+ A
Sbjct: 325 DA------MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 283 LVDMYAKCSDLVAA-KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP 341
+VD+ ++ + A K++ + W S++ HG + LA M +++P
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVK--LAEVAAMELVKIEP 436
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 245/465 (52%), Gaps = 40/465 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + H +I G + +TL YG DA ++FD +P D++ W +VLSA +
Sbjct: 181 LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFS 240
Query: 84 LANLPHRALSISRSLLH-QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+L AL + ++ +G PD F T++ AC N+ L QGK++H + + +
Sbjct: 241 KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRL--KQGKEIHGKLITNGIGS 298
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
+ VV+S+L+DMY K G EA ++F
Sbjct: 299 NVVVESSLLDMYGK-------------------------------CGSVREARQVFNGMS 327
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
KN +W+AL+ G Q+G A F +M ++ D +V+ ACA LA LGK
Sbjct: 328 KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK-----DLYCFGTVLKACAGLAAVRLGK 382
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
++HG + G V + +AL+D+Y K + +A ++ +MS +++++W +++ AQ+G
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+ EEA++ ++DMV +KP+ ++F+ ++ AC + G+V +GR F M + YGIKP +HY
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY 502
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN-TQMAVRIADKLLCLK 441
+C++DL R+G +EAENL+ D W LL C + + +++A RIA +++ L+
Sbjct: 503 SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELE 562
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
P+ SY+LLSN+Y + +RKLM+ + V K G S ID
Sbjct: 563 PKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 222/480 (46%), Gaps = 48/480 (10%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGL-LQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ HA ++KSGL N+LL Y K G +++ ++FD +D +SW S++S
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+AL + ++ G + F S+ +KAC+ +G V G+ H + + +
Sbjct: 142 KEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELG--EVRLGRCFHGVVITHGFEWNHF 199
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ STL +Y P R VFD E P +
Sbjct: 200 ISSTLAYLYGVNREPVDARRVFD-------------------------------EMPEPD 228
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ WTA++S ++ +A F M + + D +V+ AC NL + GK++H
Sbjct: 229 VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIH 288
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
G +I G S V + ++L+DMY KC + A+ +F MS+K+ VSW++++ G Q+G+ E
Sbjct: 289 GKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHE 348
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
+A+ ++ +M + + F ++ AC+ + V G+ + V G ++ + L
Sbjct: 349 KAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESAL 403
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPE 443
+DL+ +SG +D A + M + + TW A+LSA +G + AV + ++ +KP
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKP- 461
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG---YSC-IDLGKESHVFYAGET 499
D S+I + M + + ++M K +PG YSC IDL + +F E
Sbjct: 462 DYISFIAILTACGHTGMVDE-GRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAEN 520
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 164/357 (45%), Gaps = 37/357 (10%)
Query: 78 VLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
+L C L L A+ I S ++++L++ C + G Q HAH +
Sbjct: 33 ILELCKLGQLTE-AIRILNSTHSSEIPATPKLYASLLQTCNKV--FSFIHGIQFHAHVVK 89
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
S D V ++L+ +Y K G G R E R+
Sbjct: 90 SGLETDRNVGNSLLSLYFKLG-----------------------------PGMR-ETRRV 119
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
F K+ +WT+++SG V V A FV+M G+ A+ LSS V AC+ L
Sbjct: 120 FDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLD-ANEFTLSSAVKACSELGE 178
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
LG+ HG+VI G+E FIS+ L +Y + V A+ +F EM DV+ WT+++
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSA 238
Query: 318 TAQHGQAEEALALYDDMVSAR-VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
+++ EEAL L+ M + + P+ TF ++ AC N+ + +G+ + ++ + GI
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIG 297
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
++ + LLD++ + G + EA + M + +W+ALL +G + A+ I
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEI 353
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/488 (31%), Positives = 247/488 (50%), Gaps = 38/488 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCG----LLQDALQLFDTLPHRDLVSWASVLSA 81
++ HA ++K+GL H+ F + L A+ + A + + + + + SV+ A
Sbjct: 56 QQAHAFMLKTGLF-HDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
++ P AL++ R +L PD + F+ ++KACA +G+Q+H F+ S
Sbjct: 115 YANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE--EGRQIHGLFIKSGLV 172
Query: 142 NDDVVKSTLVDMYAKFG-------------------------------LPDYGRAVFDSI 170
D V++TLV++Y + G L D RA+FD +
Sbjct: 173 TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM 232
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
N SW MISGYA +G EA +F P +++ +W A+++ G + F
Sbjct: 233 EERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN 292
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
KM + D L SV+ ACA+L G+ VH + G E F++ ALVDMY+KC
Sbjct: 293 KMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC 352
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
+ A +F S++DV +W SII + HG ++AL ++ +MV KPN +TF+G++
Sbjct: 353 GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVL 412
Query: 351 YACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD 410
AC++VG++ + R LF M Y ++P+++HY C++DL R G ++EAE L+ +P
Sbjct: 413 SACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA 472
Query: 411 EPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKL 470
+LL ACK G + A RIA++LL L D S Y +SN+YA WE V R+
Sbjct: 473 SILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRN 532
Query: 471 MMVKEVKK 478
M + V +
Sbjct: 533 MRAERVNR 540
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 265/502 (52%), Gaps = 4/502 (0%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L +++H +I+ G N ++ Y KC ++ A ++FD + RD+VSW S++S +
Sbjct: 150 LARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 84 LANLPHRALSISRSLLH-QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ + +++L F+P+ ++ +AC L G +VH + +
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF--GLEVHKKMIENHIQM 267
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
D + + ++ YAK G DY RA+FD +S +S+++ A+ISGY G EA+ LF E
Sbjct: 268 DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
L W A+ISGL+Q+ + + +F +M + G + + + LSS++ + + + GK
Sbjct: 328 SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG-SRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
++H I G ++ ++++ +++D YAK L+ A+ +F + +++WT+II A HG
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
++ A +L+D M KP++VT ++ A ++ G + +F SM+ Y I+P ++HY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C++ + SR+G L +A I MP+ P W ALL+ G+ ++A D+L ++P
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
E+ +Y +++N+Y A WE VR M +KK PG S I+ K F A ++S
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCE 626
Query: 503 MKDEILGLMRKLDAEMRKRGYV 524
E+ ++ L M + Y+
Sbjct: 627 RSKEMYEIIEGLVESMSDKEYI 648
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 158/319 (49%), Gaps = 23/319 (7%)
Query: 136 LLSPYANDDVVKSTLVDMYAKFGLPDY-----GRAVFDSISSLNSISWTAMISGYARSGR 190
LL+ A D L+ + + LP + R V SI N ++ + +IS Y R R
Sbjct: 14 LLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLA-SKLISFYTRQDR 72
Query: 191 RSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVK-----------MRQEGITI 239
+AL +F E +N F++ AL+ DAF F+ R + I+I
Sbjct: 73 FRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISI 132
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
+ VL ++ G C + + L +QVHG VI G++S VF+ N ++ Y KC ++ +A+ +
Sbjct: 133 S--CVLKALSG-CDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKV 189
Query: 300 FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGL 358
F EMS +DVVSW S+I G +Q G E+ +Y M++ + KPN VT + + AC
Sbjct: 190 FDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSD 249
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
+ G + + M+E++ I+ L ++ +++ G LD A L M D T+ A++
Sbjct: 250 LIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDSVTYGAII 307
Query: 419 SACKHHGNTQMAVRIADKL 437
S HG + A+ + ++
Sbjct: 308 SGYMAHGLVKEAMALFSEM 326
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 216/509 (42%), Gaps = 82/509 (16%)
Query: 22 PFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA 81
P +LHA+I+ + + L+ Y + + AL +FD + R+ S+ ++L A
Sbjct: 38 PLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIA 97
Query: 82 CNLANLPHRALSISRSLL------HQGFQPDHFVFSTLIKACANMGPLHVNQ-GKQVHAH 134
+ A S+ S + +PD S ++KA + + +QVH
Sbjct: 98 YTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
+ + +D V + ++ Y K + R VFD +S + +SW +MISGY++SG +
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDC 217
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
++ YK + A + + G+T+ SV AC
Sbjct: 218 KKM-----YKAMLACS--------------------DFKPNGVTVI------SVFQACGQ 246
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
+ G +VH +I + + + NA++ YAKC L A+ +F EMS KD V++ +I
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAI 306
Query: 315 IVGTAQHGQAEEALALYDDMVSARV-------------------------------KPNE 343
I G HG +EA+AL+ +M S + +PN
Sbjct: 307 ISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNT 366
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
VT L+ + + + G+ + + + G ++ T ++D +++ G L A+ R
Sbjct: 367 VTLSSLLPSLTYSSNLKGGKEIHAFAIRN-GADNNIYVTTSIIDNYAKLGFLLGAQ---R 422
Query: 404 TMPVSPDEP--TWAALLSACKHHGNTQMAVRIADKLLCL--KPEDPSSYILLSNVYAGAS 459
D W A+++A HG++ A + D++ CL KP+D + +LS +A +
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS-AFAHSG 481
Query: 460 MWENVSKVRKLMMVKEVKKEPG---YSCI 485
+ + M+ K EPG Y+C+
Sbjct: 482 DSDMAQHIFDSMLTK-YDIEPGVEHYACM 509
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 216/382 (56%), Gaps = 2/382 (0%)
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
+F LSP D V+ +T++ Y + G R++FD + + +SW ++ GYA G
Sbjct: 81 YFDLSP-ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEA 139
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
R+F + P +N+F+W LI G Q+G + +F +M EG + + ++ V+ ACA
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA 199
Query: 254 NLAVWELGKQVHGLVIGLGYESC-VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
L ++ GK VH LGY V + NAL+DMY KC + A +F + R+D++SW
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWN 259
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
++I G A HG EAL L+ +M ++ + P++VTFVG++ AC ++GLV G A F SM D
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
+ I P ++H C++DL SR+G L +A I MPV D WA LL A K + +
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 433 IADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESH 492
++L+ L+P +P+++++LSN+Y A +++ ++++ M KKE G S I+
Sbjct: 380 ALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLV 439
Query: 493 VFYAGETSHPMKDEILGLMRKL 514
FY+ HP +E+ ++R+L
Sbjct: 440 KFYSSGEKHPRTEELQRILREL 461
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 35/189 (18%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL---------SACN--LANLPHRAL- 92
NT++ Y + G + +A LFD +P RD++SW +VL AC ++P R +
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 93 --------------------SISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
S R + P+ + ++ ACA +G GK VH
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF--GKWVH 211
Query: 133 AHFLLSPYANDDV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRR 191
+ Y DV VK+ L+DMY K G + VF I + ISW MI+G A G
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 192 SEALRLFRE 200
+EAL LF E
Sbjct: 272 TEALNLFHE 280
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 126/294 (42%), Gaps = 51/294 (17%)
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYT 228
S SLN + M+ G + A ++F E KN+ WT++I+G + + + V A
Sbjct: 25 STESLNQMFLFGML---CLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRY 81
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC--VFISNALVDM 286
F + I + + ++ + E+G + + C V N +++
Sbjct: 82 FDLSPERDIVLWNTMISGYI----------EMGNMLEARSL-FDQMPCRDVMSWNTVLEG 130
Query: 287 YAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVT 345
YA D+ A + +F +M ++V SW +I G AQ+G+ E L + MV V PN+ T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 346 FVGLIYACSNVGLVSKGRALFR----------------SMVEDYG--------------- 374
++ AC+ +G G+ + + ++++ YG
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHHG 425
+ L + +++ + GH EA NL M +SPD+ T+ +L ACKH G
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMG 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 39/213 (18%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L+D YGKCG ++ A+++F + RDL+SW ++++ AL++ + + G
Sbjct: 228 NALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGIS 287
Query: 105 PDHFVFSTLIKACANMG-------------------PLHVNQGKQV----HAHFLLS--- 138
PD F ++ AC +MG P + G V A FL
Sbjct: 288 PDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVE 347
Query: 139 -----PYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL---NSISWTAMISGYARSGR 190
P D V+ +TL+ + D G + + L N ++ + + Y +GR
Sbjct: 348 FINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGR 407
Query: 191 RSEALRL---FRESPYKNL--FAWTALISGLVQ 218
+A RL R++ +K +W GLV+
Sbjct: 408 FDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 247/475 (52%), Gaps = 35/475 (7%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
+++L+ Y KCG + +A LF + RD++ W ++++ A +A+ R + ++GF
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D V L++A ++G G+ VH + + + VV+++LVDMYAK G +
Sbjct: 215 RDRVVMLGLLQASGDLGD--TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV-- 270
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
A R+F +K +W +LISG Q+G
Sbjct: 271 -----------------------------ASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
AF V+M+ G D + L V+ AC+ + + G+ VH ++ V + AL+
Sbjct: 302 AFEAVVEMQSLGFQ-PDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALM 359
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
DMY+KC L +++ IF + RKD+V W ++I HG +E ++L+ M + ++P+
Sbjct: 360 DMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHA 419
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
TF L+ A S+ GLV +G+ F M+ Y I+PS +HY CL+DL +R+G ++EA ++I +
Sbjct: 420 TFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINS 479
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
+ P W ALLS C +H N + A+K+L L P+ L+SN +A A+ W+ V
Sbjct: 480 EKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEV 539
Query: 465 SKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMR 519
+KVRKLM ++K PGYS I++ E F + SH +L ++R L E+R
Sbjct: 540 AKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 210/445 (47%), Gaps = 47/445 (10%)
Query: 14 LSSVARQSPFLTKKLHAQIIKSG-LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDL 72
L S+++ +T+ +HA +I +G L L+ + G+ G + A ++FD LP R +
Sbjct: 23 LQSISKLKRHITQ-IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGV 81
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
+ S++ + P L + ++ + QPD F+ IKAC + L + +G+ V
Sbjct: 82 SVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC--LSGLVLEKGEAVW 139
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
+ Y ND V S+++++Y K G D +F ++ + I WT M++G+A++G+
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSL 199
Query: 193 EALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
+A+ +RE M+ EG D +V+ ++ A
Sbjct: 200 KAVEFYRE-------------------------------MQNEGFG-RDRVVMLGLLQAS 227
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
+L ++G+ VHG + G V + +LVDMYAK + A +F M K VSW
Sbjct: 228 GDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWG 287
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
S+I G AQ+G A +A +M S +P+ VT VG++ ACS VG + GR +V
Sbjct: 288 SLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR-----LVHC 342
Query: 373 YGIKPSLQHY---TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQM 429
Y +K + T L+D++S+ G L + + + D W ++S HGN Q
Sbjct: 343 YILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQE 401
Query: 430 AVRIADKLL--CLKPEDPSSYILLS 452
V + K+ ++P+ + LLS
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLS 426
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 7/201 (3%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ + +H + ++GL + +L+D Y K G ++ A ++F + + VSW S++S
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
L ++A + GFQPD ++ AC+ +G L G+ VH ++L + D
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL--KTGRLVHC-YILKRHVLD 351
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + L+DMY+K G R +F+ + + + W MIS Y G E + LF +
Sbjct: 352 RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTE 411
Query: 204 KNL----FAWTALISGLVQSG 220
N+ + +L+S L SG
Sbjct: 412 SNIEPDHATFASLLSALSHSG 432
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 273/526 (51%), Gaps = 40/526 (7%)
Query: 18 ARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWAS 77
A Q L ++ H + K+ N+L+ Y +CG + + +F ++ RD+VSW +
Sbjct: 330 ALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNT 389
Query: 78 VLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
++SA L L + + QGF+ D+ + L+ A +N+ + GKQ HA FL+
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI--GKQTHA-FLI 446
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFD--SISSLNSISWTAMISGYARSGRRSEAL 195
+ + S L+DMY+K GL + +F+ + + +W +MISGY ++G +
Sbjct: 447 RQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 196 RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
+FR+ +N+ R +T+A S++ AC+ +
Sbjct: 507 LVFRKMLEQNI--------------------------RPNAVTVA------SILPACSQI 534
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSII 315
+LGKQ+HG I + VF+++ALVDMY+K + A+ +F + ++ V++T++I
Sbjct: 535 GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMI 594
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
+G QHG E A++L+ M + +KP+ +TFV ++ ACS GL+ +G +F M E Y I
Sbjct: 595 LGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNI 654
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPD-EPTWAALLSACKHHGNTQMAVRIA 434
+PS +HY C+ D+ R G ++EA ++ + + W +LL +CK HG ++A ++
Sbjct: 655 QPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVS 714
Query: 435 DKLLCL-KPEDPSSY-ILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESH 492
++L K ++ S Y +LLSN+YA W++V KVR+ M K +KKE G S I++ +
Sbjct: 715 ERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVN 774
Query: 493 VFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQQE 538
F + + HP EI ++ L +MR ++ V ++ E
Sbjct: 775 CFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 175/400 (43%), Gaps = 47/400 (11%)
Query: 37 LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSI-S 95
L+ P + L + G Q A QLFD +P V W +++ NLPH AL S
Sbjct: 35 LTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS 94
Query: 96 RSLLHQGFQP-DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMY 154
R F D + +S+ +KACA L GK VH H + + VV ++L++MY
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKA--GKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 155 AK-FGLPD-----YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFA 208
PD R VFD++ N ++W +IS Y ++GR +EA R F
Sbjct: 153 VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG--------- 203
Query: 209 WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLV 268
+ MR E P+ +V A + + +GL+
Sbjct: 204 ---------------------IMMRME--VKPSPVSFVNVFPAVSISRSIKKANVFYGLM 240
Query: 269 IGLG--YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
+ LG Y +F+ ++ + MYA+ D+ +++ +F +++ W ++I Q+ E
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 327 ALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
++ L+ + + S + +EVT++ A S + V GR + +++ P + L
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP-IVIVNSL 359
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
+ ++SR G + ++ + +M D +W ++SA +G
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNG 398
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 182/444 (40%), Gaps = 49/444 (11%)
Query: 7 AYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQ--- 62
AY S L + A K +H +I+ + N+L++ Y C D +
Sbjct: 107 AYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDV 166
Query: 63 ---LFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
+FD + +++V+W +++S A ++ +P F + A +
Sbjct: 167 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSI 226
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
+ K+ + + L D+ VK V +
Sbjct: 227 SRSI-----KKANVFYGLMLKLGDEYVKDLFV--------------------------VS 255
Query: 180 AMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
+ IS YA G + R+F +N+ W +I VQ+ V++ F++ +
Sbjct: 256 SAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIV 315
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
+D + A + L ELG+Q HG V E + I N+L+ MY++C + + +
Sbjct: 316 SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 300 FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
F M +DVVSW ++I Q+G +E L L +M K + +T L+ A SN+
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 360 SKGRA----LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP-DEPTW 414
G+ L R ++ G+ + L+D++S+SG + ++ L + D+ TW
Sbjct: 436 EIGKQTHAFLIRQGIQFEGMN------SYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 415 AALLSACKHHGNTQMAVRIADKLL 438
+++S +G+T+ + K+L
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKML 513
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/526 (30%), Positives = 259/526 (49%), Gaps = 44/526 (8%)
Query: 4 SRHAYA-LKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQ 62
SRH + L + + +PF + HA I+K GL N+L+ Y GL A +
Sbjct: 103 SRHTFPPLLKAVFKLRDSNPF---QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASR 159
Query: 63 LFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP 122
LFD +D+V+W +++ A+ + G + +++KA +
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 123 LHVNQGKQVHAHFLLSPYANDDV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAM 181
V G+ VH +L + DV + S+LVDMY K D + VFD
Sbjct: 220 --VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD------------- 264
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
E P +N+ WTALI+G VQS F +M + + +
Sbjct: 265 ------------------EMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA-PN 305
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
LSSV+ ACA++ G++VH +I E L+D+Y KC L A +F
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
+ K+V +WT++I G A HG A +A L+ M+S+ V PNEVTF+ ++ AC++ GLV +
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
GR LF SM + ++P HY C++DLF R G L+EA+ LI MP+ P W AL +C
Sbjct: 426 GRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSC 485
Query: 422 KHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG 481
H + ++ A +++ L+P Y LL+N+Y+ + W+ V++VRK M ++V K PG
Sbjct: 486 LLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPG 545
Query: 482 YSCIDLGKESHVFYAGETSHPMK-DEILGLMRKLDAEMRKRGYVPD 526
+S I++ + F A + P++ D++ + + +MR +PD
Sbjct: 546 FSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR----LPD 587
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 185/396 (46%), Gaps = 73/396 (18%)
Query: 75 WASVLSACNLANLPHRALSI--SRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
W S++ + +R LS R + G P F L+KA L + Q H
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK---LRDSNPFQFH 126
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
AH + +D V+++L+ Y+ GL D+ +FD + ++WTAMI G+ R+G S
Sbjct: 127 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 193 EALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
EA+ FV+M++ G+ A+ + + SV+ A
Sbjct: 187 EAM-------------------------------VYFVEMKKTGVA-ANEMTVVSVLKAA 214
Query: 253 ANLAVWELGKQVHGLVIGLGYESC-VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSW 311
+ G+ VHGL + G C VFI ++LVDMY KCS A+ +F EM ++VV+W
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTW 274
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
T++I G Q ++ + ++++M+ + V PNE T ++ AC++VG + +GR + M++
Sbjct: 275 TALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK 334
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDE-------------------------------AEN 400
+ I+ + T L+DL+ + G L+E A +
Sbjct: 335 N-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 401 LIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRI 433
L TM VSP+E T+ A+LSAC H G + R+
Sbjct: 394 LFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 256/499 (51%), Gaps = 35/499 (7%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ + LH QI+K+G L+ Y KCG + + ++ +T+P++D+V W ++S
Sbjct: 263 MGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+AL + +L G ++++ +CA +G + G VH + L Y D
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL--GASVHGYVLRHGYTLD 380
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
++L+ MYAK G D +F+ ++ + +SW A+ISGYA++ +AL LF E +
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
K + VD+F T V + Q AC++ +GK
Sbjct: 441 KTV--------------QQVDSF-TVVSLLQ----------------ACSSAGALPVGKL 469
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H +VI C + ALVDMY+KC L AA+ F +S KDVVSW +I G HG+
Sbjct: 470 IHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGK 529
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+ AL +Y + + + ++PN V F+ ++ +CS+ G+V +G +F SMV D+G++P+ +H
Sbjct: 530 GDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLA 589
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++DL R+ +++A + P +L AC+ +G T++ I + ++ LKP
Sbjct: 590 CVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPG 649
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM 503
D Y+ L + +A W++VS+ M +KK PG+S I++ ++ F+ TSH
Sbjct: 650 DAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS- 708
Query: 504 KDEILGLMRKLDAEMRKRG 522
D+ + L++ L EM + G
Sbjct: 709 -DDTVSLLKLLSREMMQFG 726
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 237/503 (47%), Gaps = 55/503 (10%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N++L+ Y KC + DA LFD + RD+VSW +++S L + + G +
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD F + M L + G+ +H + + + VDM+ K
Sbjct: 243 PDQQTFGASLSVSGTMCDLEM--GRMLHCQIVKTGFD---------VDMHLK-------- 283
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
TA+I+ Y + G+ + R+ P K++ WT +ISGL++ G
Sbjct: 284 --------------TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEK 329
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A F +M Q G ++ ++SVV +CA L ++LG VHG V+ GY N+L+
Sbjct: 330 ALIVFSEMLQSGSDLSSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLI 388
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP-NE 343
MYAKC L + IF M+ +D+VSW +II G AQ+ +AL L+++M V+ +
Sbjct: 389 TMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDS 448
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
T V L+ ACS+ G + G+ + ++ + I+P T L+D++S+ G+L+ A+
Sbjct: 449 FTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFD 507
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWEN 463
++ D +W L++ HG +A+ I + L E P+ I L+ V + S
Sbjct: 508 SISW-KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME-PNHVIFLA-VLSSCSHNGM 564
Query: 464 VSKVRKLM--MVKEVKKEPGY---SC-IDL------GKESHVFYAGETSHPMKDEILGLM 511
V + K+ MV++ EP + +C +DL +++ FY + P D +LG++
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID-VLGII 623
Query: 512 RKLDAEMRKRGYVPDTSYVLHDM 534
LDA R G + DM
Sbjct: 624 --LDA-CRANGKTEVEDIICEDM 643
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 178/393 (45%), Gaps = 39/393 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H Q++ +G S ++L++ Y K GLL A ++F+ + RD+V W +++ + A +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
A S+ + QG +P ++ G L + Q + +H ++ + D V
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVM 182
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
++++++Y K + +FD + + +SW MISGYA G SE L+L
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKL---------- 232
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+MR +G+ D + + + E+G+ +H
Sbjct: 233 ---------------------LYRMRGDGLR-PDQQTFGASLSVSGTMCDLEMGRMLHCQ 270
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
++ G++ + + AL+ MY KC A+ + + KDVV WT +I G + G+AE+A
Sbjct: 271 IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKA 330
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
L ++ +M+ + + ++ +C+ +G G ++ V +G L+
Sbjct: 331 LIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV-HGYVLRHGYTLDTPALNSLIT 389
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
++++ GHLD++ + M D +W A++S
Sbjct: 390 MYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 166/349 (47%), Gaps = 39/349 (11%)
Query: 90 RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST 149
+ LS S+L PD F F +L+KACA++ L G +H L++ +++D + S+
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSF--GLSIHQQVLVNGFSSDFYISSS 86
Query: 150 LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAW 209
LV++YAKFGL + R VF+ + + + WTAMI Y+R+G EA L E
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE--------- 137
Query: 210 TALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI 269
MR +GI +L + G L + +L + +H +
Sbjct: 138 ----------------------MRFQGIKPGPVTLLEMLSGV---LEITQL-QCLHDFAV 171
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALA 329
G++ + + N+++++Y KC + AK +F +M ++D+VSW ++I G A G E L
Sbjct: 172 IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILK 231
Query: 330 LYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
L M ++P++ TF + + + GR L +V+ G + T L+ ++
Sbjct: 232 LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMY 290
Query: 390 SRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+ G + + ++ T+P + D W ++S G + A+ + ++L
Sbjct: 291 LKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 13/223 (5%)
Query: 9 ALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL 67
A+ S ++S A+ F L +H +++ G + P N+L+ Y KCG L +L +F+ +
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 68 PHRDLVSWASVLSA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
RDLVSW +++S +L L Q D F +L++AC++ G L V
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV- 466
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
GK +H + S +V + LVDMY+K G + + FDSIS + +SW +I+GY
Sbjct: 467 -GKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYG 525
Query: 187 RSGRRSEALRLFRESPYK----NLFAWTALIS-----GLVQSG 220
G+ AL ++ E + N + A++S G+VQ G
Sbjct: 526 FHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQG 568
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 109/221 (49%), Gaps = 6/221 (2%)
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
I+ L G+ TF M + + D S++ ACA+L G +H V+ G
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKL-LPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNG 76
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
+ S +IS++LV++YAK L A+ +F EM +DVV WT++I ++ G EA +L +
Sbjct: 77 FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVN 136
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
+M +KP VT + ++ S V +++ + L V YG + +L+L+ +
Sbjct: 137 EMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVI-YGFDCDIAVMNSMLNLYCKC 192
Query: 393 GHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
H+ +A++L M D +W ++S GN +++
Sbjct: 193 DHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKL 232
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 240/472 (50%), Gaps = 38/472 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ + +H + + L N L++ Y KCG + +A +FD + RD+++W +++
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
AL + R + +G +P+ ++L+ C + L VN GK +H + +D
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD--ALKVNDGKCLHGWAVRQQVYSD 353
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+++++L+ MY A+ R R+F +
Sbjct: 354 IIIETSLISMY-------------------------------AKCKRVDLCFRVFSGASK 382
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ W+A+I+G VQ+ DA F +MR+E + + L+S++ A A LA
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE-PNIATLNSLLPAYAALADLRQAMN 441
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTA 319
+H + G+ S + + LV +Y+KC L +A IF + K DVV W ++I G
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
HG AL ++ +MV + V PNE+TF + ACS+ GLV +G LFR M+E Y
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
HYTC++DL R+G LDEA NLI T+P P W ALL+AC H N Q+ A+KL
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE 621
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKES 491
L+PE+ +Y+LL+N+YA W+++ KVR +M ++K+PG+S I++ S
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNS 673
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 184/407 (45%), Gaps = 41/407 (10%)
Query: 18 ARQSPFLTKKLHAQIIKSG-LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWA 76
A QS TK LH +I G +S H +TL Y CG + A +LF+ +P L+S+
Sbjct: 27 ATQSISKTKALHCHVITGGRVSGH--ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYN 84
Query: 77 SVLSACNLANLPHRALSISRSLLHQGFQ--PDHFVFSTLIKACANMGPLHVNQGKQVHAH 134
V+ L H A+S+ ++ +G + PD + + + KA + + + G VH
Sbjct: 85 IVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL--GLVVHGR 142
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
L S + D V++ L+ MY FG + R VFD + +
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN---------------------- 180
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
+++ +W +ISG ++G DA F M E + + D + S++ C +
Sbjct: 181 ---------RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL-DHATIVSMLPVCGH 230
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSI 314
L E+G+ VH LV + + NALV+MY KC + A+++F M R+DV++WT +
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
I G + G E AL L M V+PN VT L+ C + V+ G+ L V
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ- 349
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
+ + T L+ ++++ +D + P W+A+++ C
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP-WSAIIAGC 395
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 183/409 (44%), Gaps = 38/409 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H +I++S + + N LL Y G ++ A +FD + +RD++SW +++S
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+ AL + ++++ DH +++ C ++ L + G+ VH + VK
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM--GRNVHKLVEEKRLGDKIEVK 256
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
+ LV+MY K G D R VFD + + I+WT MI+GY G AL L R
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR-------- 308
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
L+Q F +R +TIA S+V C + GK +HG
Sbjct: 309 --------LMQ----------FEGVRPNAVTIA------SLVSVCGDALKVNDGKCLHGW 344
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
+ S + I +L+ MYAKC + +F S+ W++II G Q+ +A
Sbjct: 345 AVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDA 404
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
L L+ M V+PN T L+ A + + + + + + + G SL T L+
Sbjct: 405 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVH 463
Query: 388 LFSRSGHLDEAE---NLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
++S+ G L+ A N I+ S D W AL+S HG+ A+++
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 134/271 (49%), Gaps = 4/271 (1%)
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT-IADPL 243
YA G + A +LF E P +L ++ +I V+ G DA F++M EG+ + D
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
V A L +LG VHG ++ + ++ NAL+ MY + A+ +F M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 304 SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR 363
+DV+SW ++I G ++G +AL ++D MV+ V + T V ++ C ++ + GR
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 364 ALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKH 423
+ + +VE+ + ++ L++++ + G +DEA + M D TW +++
Sbjct: 239 NVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTE 296
Query: 424 HGNTQMAVRIADKLLCLKPEDPSSYILLSNV 454
G+ + A+ + +L+ + P++ + S V
Sbjct: 297 DGDVENALELC-RLMQFEGVRPNAVTIASLV 326
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/524 (29%), Positives = 266/524 (50%), Gaps = 45/524 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K+ HA I +G+ +LL+ Y K GL++ A +FD + +D+V+W ++S
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L A+ + + + + + D +TL+ A A L + GK+V + + + +D V
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL--GKEVQCYCIRHSFESDIV 411
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF------- 198
+ ST++DMYAK G + VFDS + I W +++ YA SG EALRLF
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 199 --------------------------------RESPYKNLFAWTALISGLVQSGNGVDAF 226
NL +WT +++G+VQ+G +A
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 227 YTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI-GLGYESCVFISNALVD 285
KM++ G+ + ++ + ACA+LA +G+ +HG +I L + S V I +LVD
Sbjct: 532 LFLRKMQESGLR-PNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVD 590
Query: 286 MYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVT 345
MYAKC D+ A+ +F ++ ++I A +G +EA+ALY + +KP+ +T
Sbjct: 591 MYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 346 FVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
++ AC++ G +++ +F +V +KP L+HY ++DL + +G ++A LI M
Sbjct: 651 ITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Query: 406 PVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVS 465
P PD +L+++C T++ ++ KLL +PE+ +Y+ +SN YA W+ V
Sbjct: 711 PFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVV 770
Query: 466 KVRKLMMVKEVKKEPGYSCIDLGKES--HVFYAGETSHPMKDEI 507
K+R++M K +KK+PG S I + E HVF A + +H +EI
Sbjct: 771 KMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 202/401 (50%), Gaps = 38/401 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ +H ++KSGL ++L D YGKCG+L DA ++FD +P R+ V+W +++
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+ + + QG +P ST + A ANMG V +GKQ HA +++ D++
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG--VEEGKQSHAIAIVNGMELDNI 310
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ ++L++ Y K GL +Y VFD + + ++W +ISGY +
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ------------------ 352
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
GLV+ DA Y MR E + D + L++++ A A +LGK+V
Sbjct: 353 --------QGLVE-----DAIYMCQLMRLEKLKY-DCVTLATLMSAAARTENLKLGKEVQ 398
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
I +ES + +++ ++DMYAKC +V AK +F KD++ W +++ A+ G +
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EAL L+ M V PN +T+ +I + G V + + +F M + GI P+L +T +
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTM 517
Query: 386 LDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKH 423
++ ++G +EA +R M S P+ + LSAC H
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 198/415 (47%), Gaps = 48/415 (11%)
Query: 26 KKLHAQIIKSG--LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K++HA+I+K+G +++E L+ Y KC L+ A LF L R++ SWA+++
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQ-GKQVHAHFLLSPYAN 142
L AL +L PD+FV + KAC G L ++ G+ VH + + S +
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC---GALKWSRFGRGVHGYVVKSGLED 206
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V S+L DMY K G+ D VFD I N+++W A++ GY ++G+ EA+RLF +
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD-- 264
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
MR++G+ + +S+ + A AN+ E GK
Sbjct: 265 -----------------------------MRKQGVE-PTRVTVSTCLSASANMGGVEEGK 294
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
Q H + I G E + +L++ Y K + A+ +F M KDVV+W II G Q G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
E+A+ + M ++K + VT L+ A + + G+ V+ Y I+ S +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE-----VQCYCIRHSFESD 409
Query: 383 TCL----LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
L +D++++ G + +A+ + + V D W LL+A G + A+R+
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGEALRL 463
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 48/349 (13%)
Query: 90 RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP--YANDDVVK 147
ALS+ + + + ++ +++ C L + GKQ+HA L + YA ++ ++
Sbjct: 53 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDL--STGKQIHARILKNGDFYARNEYIE 110
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
+ LV YAK + +F LR+ +N+F
Sbjct: 111 TKLVIFYAKCDALEIAEVLFSK-------------------------LRV------RNVF 139
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+W A+I + G A FV+M + I D V+ +V AC L G+ VHG
Sbjct: 140 SWAAIIGVKCRIGLCEGALMGFVEMLENEI-FPDNFVVPNVCKACGALKWSRFGRGVHGY 198
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
V+ G E CVF++++L DMY KC L A +F E+ ++ V+W +++VG Q+G+ EEA
Sbjct: 199 VVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEA 258
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR-----ALFRSMVEDYGIKPSLQHY 382
+ L+ DM V+P VT + A +N+G V +G+ A+ M D + SL ++
Sbjct: 259 IRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNF 318
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
C + G ++ AE + M D TW ++S G + A+
Sbjct: 319 YC------KVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAI 360
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 274/502 (54%), Gaps = 13/502 (2%)
Query: 26 KKLHAQIIK-SGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
K++H+ I++ S L + N L+ Y + G A F + +D++SW ++L A
Sbjct: 350 KEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFAD 409
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ + L++ LL++ D +L+K C N+ + + K+VH + + + +D+
Sbjct: 410 SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQG--IGKVKEVHGYSVKAGLLHDE 467
Query: 145 ---VVKSTLVDMYAKFGLPDYGRAVFDSISSLNS-ISWTAMISGYARSGRRSEALRLFRE 200
+ + L+D YAK G +Y +F +S + +S+ +++SGY SG +A LF E
Sbjct: 468 EEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTE 527
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
+L W+ ++ +S +A F +++ G+ + + + +++ CA LA L
Sbjct: 528 MSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR-PNTVTIMNLLPVCAQLASLHL 586
Query: 261 GKQVHGLVI--GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
+Q HG +I GLG + + L+D+YAKC L A +F +R+D+V +T+++ G
Sbjct: 587 VRQCHGYIIRGGLGD---IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGY 643
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
A HG+ +EAL +Y M + +KP+ V ++ AC + GL+ G ++ S+ +G+KP+
Sbjct: 644 AVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPT 703
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
++ Y C +DL +R G LD+A + + MPV P+ W LL AC + + +A+ LL
Sbjct: 704 MEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLL 763
Query: 439 CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGE 498
+ +D +++L+SN+YA + WE V ++R LM KE+KK G S +++ + +VF +G+
Sbjct: 764 QAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGD 823
Query: 499 TSHPMKDEILGLMRKLDAEMRK 520
SHP +D I L+ L +M++
Sbjct: 824 CSHPRRDSIFDLVNALYLQMKE 845
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 193/441 (43%), Gaps = 48/441 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLL-QDALQLFDTLPHRDLVSWASVLSACNL 84
K +H+ IIK+GL + N L+ Y K G + DA FD + +D+VSW ++++ +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP-LHVNQGKQVHAHFLLSPYAND 143
N+ A +L + +P++ + ++ CA+M + G+Q+H++ + +
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V +++S Y R GR EA LF
Sbjct: 262 HVFVCN------------------------------SLVSFYLRVGRIEEAASLFTRMGS 291
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
K+L +W +I+G + AF F + +G D + + S++ CA L GK+
Sbjct: 292 KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Query: 264 VHGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+H ++ Y + NAL+ YA+ D AA + F MS KD++SW +I+ A
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH- 381
+ + L L +++ + + VT + L+ C NV + K + V Y +K L H
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE-----VHGYSVKAGLLHD 466
Query: 382 ------YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
LLD +++ G+++ A + + ++ +LLS + G+ A +
Sbjct: 467 EEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFT 526
Query: 436 KLLCLKPEDPSSYILLSNVYA 456
+ + D +++ L+ +YA
Sbjct: 527 E---MSTTDLTTWSLMVRIYA 544
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 176/402 (43%), Gaps = 43/402 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ LH + K G ++L+ Y KC + D ++F + D V W VL+ +++
Sbjct: 41 RALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS 100
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+P F+ ++ C +G + GK +H++ + + D +
Sbjct: 101 CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY--NGKSMHSYIIKAGLEKDTL 158
Query: 146 VKSTLVDMYAKFG--LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + LV MYAKFG PD FD I+ + +SW A+I+G++ +
Sbjct: 159 VGNALVSMYAKFGFIFPD-AYTAFDGIADKDVVSWNAIIAGFSEN--------------- 202
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL---AVWEL 260
N+ A DAF +F M +E T + +++V+ CA++
Sbjct: 203 -NMMA---------------DAFRSFCLMLKEP-TEPNYATIANVLPVCASMDKNIACRS 245
Query: 261 GKQVHGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
G+Q+H V+ + ++ VF+ N+LV Y + + A +F M KD+VSW +I G A
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 320 QHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
+ + +A L+ ++V V P+ VT + ++ C+ + ++ G+ + ++ +
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
L+ ++R G A M + D +W A+L A
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDA 406
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 137/328 (41%), Gaps = 43/328 (13%)
Query: 99 LHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH-FLLSPYANDDVVKSTLVDMYAKF 157
L GF DH VF ++KACA++ L G+ +H F L A +V KS L +MYAK
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDL--TSGRALHGCVFKLGHIACSEVSKSVL-NMYAK- 68
Query: 158 GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGL- 216
R + ++FR+ + W +++GL
Sbjct: 69 ------------------------------CRRMDDCQKMFRQMDSLDPVVWNIVLTGLS 98
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
V G F+ + E + + V+ C L GK +H +I G E
Sbjct: 99 VSCGRETMRFFKAMHFADE--PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKD 156
Query: 277 VFISNALVDMYAKCSDLVAAKYI-FCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV 335
+ NALV MYAK + Y F ++ KDVVSW +II G +++ +A + M+
Sbjct: 157 TLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLML 216
Query: 336 SARVKPNEVTFVGLIYACSNVG---LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
+PN T ++ C+++ GR + +V+ ++ + L+ + R
Sbjct: 217 KEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRV 276
Query: 393 GHLDEAENLIRTMPVSPDEPTWAALLSA 420
G ++EA +L M S D +W +++
Sbjct: 277 GRIEEAASLFTRMG-SKDLVSWNVVIAG 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
Query: 241 DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
D V VV ACA+++ G+ +HG V LG+ +C +S ++++MYAKC + + +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNVGLV 359
+M D V W ++ G + E + + M + KP+ VTF ++ C +G
Sbjct: 80 RQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 360 SKGRALFRSMVEDYGIKPSLQHYT----CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWA 415
G+++ Y IK L+ T L+ ++++ G + D +W
Sbjct: 139 YNGKSM-----HSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 416 ALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVY-AGASMWENVS 465
A+++ N MA L LK +Y ++NV ASM +N++
Sbjct: 194 AIIAGFSE--NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 244/473 (51%), Gaps = 38/473 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ +H+ + K GL + ++L+ Y KCG + A +LFD + RD VSW S++S + A
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEA 211
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+ + R + +GF+PD +++ AC+++G L + LL A
Sbjct: 212 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR--------LLEEMA---- 259
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ K GL ++ + +IS Y + G A R+F + K+
Sbjct: 260 -------ITKKIGL--------------STFLGSKLISMYGKCGDLDSARRVFNQMIKKD 298
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
AWTA+I+ Q+G +AF F +M + G++ D LS+V+ AC ++ ELGKQ+
Sbjct: 299 RVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS-PDAGTLSTVLSACGSVGALELGKQIE 357
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
L + ++++ LVDMY KC + A +F M K+ +W ++I A G A+
Sbjct: 358 THASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAK 417
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EAL L+D M V P+++TF+G++ AC + GLV +G F M +G+ P ++HYT +
Sbjct: 418 EALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNI 474
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP-ED 444
+DL SR+G LDEA + P PDE AA+L AC + + + L+ +K ++
Sbjct: 475 IDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKN 534
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAG 497
+Y++ SNV A MW+ +K+R LM + V K PG S I++ E F AG
Sbjct: 535 AGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 212/438 (48%), Gaps = 51/438 (11%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-CNL 84
+++ AQ++ + + PN L+ + G + LF + S+ ++ N
Sbjct: 54 RQIQAQMLLHSVEK----PNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 109
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
N ALS+ R + G +PD F ++ + ACA + + V G+ VH+ D
Sbjct: 110 WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV--GRSVHSSLFKVGLERDV 167
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
+ +L+ MYAK G GYAR +LF E +
Sbjct: 168 HINHSLIMMYAKCGQ-----------------------VGYAR--------KLFDEITER 196
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
+ +W ++ISG ++G DA F KM +EG D L S++GAC++L G+ +
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE-PDERTLVSMLGACSHLGDLRTGRLL 255
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ I F+ + L+ MY KC DL +A+ +F +M +KD V+WT++I +Q+G++
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH--- 381
EA L+ +M V P+ T ++ AC +VG + G+ +E + + SLQH
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-----IETHASELSLQHNIY 370
Query: 382 -YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
T L+D++ + G ++EA + MPV +E TW A+++A H G+ + A+ + D+ + +
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGHAKEALLLFDR-MSV 428
Query: 441 KPEDPSSYILLSN-VYAG 457
P D + +LS V+AG
Sbjct: 429 PPSDITFIGVLSACVHAG 446
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 259/495 (52%), Gaps = 48/495 (9%)
Query: 51 YGKC--GLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQ--GFQPD 106
YG C G +++A +LF +P R++VSW +++S L AL + + P+
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPN 298
Query: 107 HFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA---NDDVVKSTLVDMYAKFGL---- 159
+L AC +G G+Q+HA + + + +D + +LV MYA GL
Sbjct: 299 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 160 -----------------------PDYGRA--VFDSISSL-NSISWTAMISGYARSGRRSE 193
D RA +F+ + SL + +SWT+MI GY +G S
Sbjct: 359 QSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSR 418
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL--VLSSVVGA 251
A LF++ K+ WT +ISGLVQ+ +A M + G+ + VL S GA
Sbjct: 419 AFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 252 CANLAVWELGKQVHGLVIGLG--YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV 309
+NL + GK +H ++ Y+ + + N+LV MYAKC + A IF +M +KD V
Sbjct: 479 TSNL---DQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV 535
Query: 310 SWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
SW S+I+G + HG A++AL L+ +M+ + KPN VTF+G++ ACS+ GL+++G LF++M
Sbjct: 536 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM 595
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC----KHHG 425
E Y I+P + HY ++DL R+G L EAE I +P +PD + ALL C +
Sbjct: 596 KETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKD 655
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
+A R A +LL L P + ++ L NVYAG + ++RK M +K VKK PG S +
Sbjct: 656 AEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWV 715
Query: 486 DLGKESHVFYAGETS 500
+ ++VF +G+ S
Sbjct: 716 VVNGRANVFLSGDKS 730
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 198/464 (42%), Gaps = 84/464 (18%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N +L Y KC + +A LF +P +++VSW +L+A A+ + +
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM------ 164
Query: 105 PDHFVFS--TLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
P+ V S TL+ G + + KQV F P + D V + ++ Y + +
Sbjct: 165 PERNVVSWNTLVTGLIRNGDME--KAKQV---FDAMP-SRDVVSWNAMIKGYIENDGMEE 218
Query: 163 GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNG 222
+ +F +S N ++WT+M+ GY R G EA RLF E P +N+ +WTA+ISG +
Sbjct: 219 AKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 223 VDAFYTFVKMRQEGITIA-DPLVLSSVVGACANLAV--WELGKQVHGLVIGLGYESCVF- 278
+A F++M+++ ++ + L S+ AC L V LG+Q+H VI G+E+
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHD 338
Query: 279 --ISNALVDMYA-----------------------------KCSDLVAAKYIFCEM-SRK 306
++ +LV MYA K DL A+ +F + S
Sbjct: 339 GRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYD-------------------------------DMV 335
D VSWTS+I G + G A L+ DMV
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 336 SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI-KPSLQHYTCLLDLFSRSGH 394
+KP T+ L+ + + +G+ + + + P L L+ ++++ G
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 395 LDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+++A + M V D +W +++ HHG A+ + ++L
Sbjct: 519 IEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 163/377 (43%), Gaps = 65/377 (17%)
Query: 124 HVNQGKQVHAHFLLSPYA-----NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
+++G VHA LL N V ++L+ YAK G D R +F+ + N ++
Sbjct: 52 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 111
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
AM++GY + R +EA LFRE P KN+ +WT +++ L G DA F +M + +
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 239 IADPLVLSSVVGA-------------CANLAVWEL---------GKQVHGLVIGLGYESC 276
+ LV + ++ W G + L+ G E
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKN 230
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM-- 334
V ++V Y + D+ A +FCEM +++VSWT++I G A + EAL L+ +M
Sbjct: 231 VVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Query: 335 -VSARVKPNEVTFVGLIYACSNVG-------------LVSKGRA-------LFRSMVEDY 373
V A V PN T + L YAC +G ++S G L +S+V Y
Sbjct: 291 DVDA-VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 374 ---GIKPS----------LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
G+ S LQ +++ + ++G L+ AE L + D+ +W +++
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 421 CKHHGNTQMAVRIADKL 437
G+ A + KL
Sbjct: 410 YLEAGDVSRAFGLFQKL 426
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 26 KKLHAQIIKSGLSQHEP---FPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
K +H I K+ + ++P N+L+ Y KCG ++DA ++F + +D VSW S++
Sbjct: 486 KHIHCVIAKT-TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
+ L +AL++ + +L G +P+ F ++ AC++ G
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/507 (30%), Positives = 257/507 (50%), Gaps = 35/507 (6%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-F 103
++++ Y K G + DA LFD + R++++W +++ A + + +G
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+ + + + KAC + + +G Q+H P D + ++L+ MY+K G
Sbjct: 272 KVNSNTLAVMFKACRDF--VRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT------------- 210
+AVF + + +S+SW ++I+G + + SEA LF + P K++ +WT
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 211 ------------------ALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
A+IS V +G +A F KM Q+ + + SSV+ A
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC-PNSYTFSSVLSAT 448
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
A+LA G Q+HG V+ + + + + N+LV MY KC + A IF +S ++VS+
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
++I G + +G ++AL L+ + S+ +PN VTF+ L+ AC +VG V G F+SM
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
Y I+P HY C++DL RSG LD+A NLI TMP P W +LLSA K H +A
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 433 IADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESH 492
A KL+ L+P+ + Y++LS +Y+ + ++ + K +KK+PG S I L E H
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVH 688
Query: 493 VFYAGETSHPMKDEILGLMRKLDAEMR 519
F AG+ S +EI ++ + EM
Sbjct: 689 NFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 180/385 (46%), Gaps = 35/385 (9%)
Query: 47 LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-----CNLANLPHRALSISRSLLHQ 101
++ AY + G + A Q+FD +P R S+ ++++A C+L I
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIP------ 140
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA---NDDVVKSTLVDMYAKFG 158
+ + ++T+I V G+ A FL + D V + L+ Y + G
Sbjct: 141 --EKNAVSYATMITG-------FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 159 LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQ 218
+ VF ++ +S ++M+ GY + GR +A LF +N+ WTA+I G +
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK 251
Query: 219 SGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVF 278
+G D F F++MRQEG + L+ + AC + + G Q+HGLV + E +F
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF 311
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
+ N+L+ MY+K + AK +F M KD VSW S+I G Q Q EA L++ M
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG-- 369
Query: 339 VKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEA 398
+ V++ +I S G +SK LF M E I +T ++ F +G+ +EA
Sbjct: 370 --KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEA 422
Query: 399 ENLIRTM---PVSPDEPTWAALLSA 420
M V P+ T++++LSA
Sbjct: 423 LCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 177/468 (37%), Gaps = 71/468 (15%)
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+ IS +AR+G EA +FR+ +++ +W A+IS ++G A+ F +M T
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 239 IADPLVLSSVVGACANLAVWEL------------GKQVHGLVIGLGYESCVFI------- 279
+ ++ + + C +EL + G V ++ F+
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK 173
Query: 280 ------SNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDD 333
SN L+ Y + A +F M+ K+VVS +S++ G + G+ +A +L+D
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDR 233
Query: 334 MVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDL---FS 390
M + N +T+ +I G G LF M ++ +K + + F
Sbjct: 234 M----TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 391 RSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYIL 450
R + L+ MP+ D +L+S G A + +K +D S+
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAV---FGVMKNKDSVSW-- 344
Query: 451 LSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYA-GETSHPMKDEILG 509
+++ G + +S+ +L +K PG + F GE S + E+ G
Sbjct: 345 -NSLITGLVQRKQISEAYELF-----EKMPGKDMVSWTDMIKGFSGKGEISKCV--ELFG 396
Query: 510 LMRKLD--------AEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVP 561
+M + D + GY + H M Q+E + S L+ L +
Sbjct: 397 MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 562 GTII-------RIVKNLRV----------CGDCHTVLKLISTIESREI 592
G I IV +L V CG+ + K+ S I I
Sbjct: 457 GLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 275 SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM 334
+ +F N+ + +A+ +L A+ IF +MS + +VSW ++I A++G+ +A ++D+M
Sbjct: 48 TAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM 107
Query: 335 VSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGH 394
+I ++G K LF + E + Y ++ F R+G
Sbjct: 108 PVRVTTSYNAMITAMIKNKCDLG---KAYELFCDIPEKNAVS-----YATMITGFVRAGR 159
Query: 395 LDEAENLIRTMPVS-PDEPTWAALLSACKHHGNTQMAVRI 433
DEAE L PV D LLS G AVR+
Sbjct: 160 FDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRV 199
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 6 HAYALKSQLSSVARQSPFLTK-KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
++Y S LS+ A + + ++H +++K + N+L+ Y KCG DA ++F
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 65 DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH 124
+ ++VS+ +++S + +AL + L G +P+ F L+ AC ++G +
Sbjct: 497 SCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG--Y 554
Query: 125 VNQG----KQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
V+ G K + + + + P + + +VD+ + GL D
Sbjct: 555 VDLGWKYFKSMKSSYNIEPGPDH---YACMVDLLGRSGLLD 592
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 248/471 (52%), Gaps = 53/471 (11%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H + K + + + LL Y +CG +++A FD++ RDLVSW +++
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+ S+ + +L +G +PD F F +L++A + L +
Sbjct: 194 CADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI--------------------- 232
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
S L + K G +GR+ S ++++ Y + G + A +L + ++L
Sbjct: 233 VSELHGLAIKLG---FGRS---------SALIRSLVNAYVKCGSLANAWKLHEGTKKRDL 280
Query: 207 FAWTALISGLVQSGN----GVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
+ TALI+G Q N D F ++M+ T D +V+SS++ C +A +G+
Sbjct: 281 LSCTALITGFSQQNNCTSDAFDIFKDMIRMK----TKMDEVVVSSMLKICTTIASVTIGR 336
Query: 263 QVHGLVIG---LGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
Q+HG + + ++ V + N+L+DMYAK ++ A F EM KDV SWTS+I G
Sbjct: 337 QIHGFALKSSQIRFD--VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYG 394
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
+HG E+A+ LY+ M R+KPN+VTF+ L+ ACS+ G G ++ +M+ +GI+
Sbjct: 395 RHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEARE 454
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMP--VSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+H +C++D+ +RSG+L+EA LIR+ VS TW A L AC+ HGN Q++ A +L
Sbjct: 455 EHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQL 514
Query: 438 LCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE---VKKEPGYSCI 485
L ++P P +YI L++VYA W+N RKLM KE K PGYS +
Sbjct: 515 LSMEPRKPVNYINLASVYAANGAWDNALNTRKLM--KESGSCNKAPGYSLV 563
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 205/428 (47%), Gaps = 38/428 (8%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H I +G + + L+D Y K G ++ A +LFD + RD+VSW +++S +
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
AL + + + + + + F + +++K+C ++G L +G Q+H A + +V+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCL--KEGMQIHGSVEKGNCAGNLIVR 151
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
S L+ +YA+ G + R FDS+ + +SW AMI GY + + LF+
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQL------- 204
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
++ G D F TF L+ +S+V C E+ ++HGL
Sbjct: 205 --------MLTEGKKPDCF-TF-----------GSLLRASIVVKC-----LEIVSELHGL 239
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ-AEE 326
I LG+ + +LV+ Y KC L A + ++D++S T++I G +Q +
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
A ++ DM+ + K +EV ++ C+ + V+ GR + ++ I+ + L+
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL--LCLKPED 444
D++++SG +++A M D +W +L++ HGN + A+ + +++ +KP D
Sbjct: 360 DMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 445 PSSYILLS 452
+ LLS
Sbjct: 419 VTFLSLLS 426
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 44/310 (14%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-C 82
+ +LH IK G + +L++AY KCG L +A +L + RDL+S ++++
Sbjct: 232 IVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFS 291
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
N A I + ++ + D V S+++K C + + + G+Q+H L S
Sbjct: 292 QQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTI--GRQIHGFALKSSQIR 349
Query: 143 DDV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
DV + ++L+DMYAK G + F+ + + SWT++I+GY R G +A+ L+
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYN-- 407
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
+M E I D L S++ AC++ ELG
Sbjct: 408 -----------------------------RMEHERIKPNDVTFL-SLLSACSHTGQTELG 437
Query: 262 KQVHGLVIGL-GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS-----WTSII 315
+++ +I G E+ + ++DM A+ L A + S++ +VS W + +
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALI--RSKEGIVSLSSSTWGAFL 495
Query: 316 VGTAQHGQAE 325
+HG +
Sbjct: 496 DACRRHGNVQ 505
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 16/227 (7%)
Query: 21 SPFLTKKLHAQIIKSGLSQHE-PFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
S + +++H +KS + + N+L+D Y K G ++DA+ F+ + +D+ SW S++
Sbjct: 331 SVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLI 390
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN---QGKQVHAHFL 136
+ +A+ + + H+ +P+ F +L+ AC++ G + ++ H +
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 137 LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS---ISSLNSISWTAMISGYARSGR--- 190
A ++ + S ++DM A+ G + A+ S I SL+S +W A + R G
Sbjct: 451 ---EAREEHL-SCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQL 506
Query: 191 -RSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
+ A +L P K + + L S +G +A T M++ G
Sbjct: 507 SKVAATQLLSMEPRKPV-NYINLASVYAANGAWDNALNTRKLMKESG 552
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 268/507 (52%), Gaps = 25/507 (4%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L+ Y + + A +LFD + RD VSW +V++ + A + + G +
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLS-----PYANDDV-----VKSTLVDMY 154
++ + C + G V A L+S P + D V +K+ +
Sbjct: 243 VSVITWNIISGGC-------LQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGA 295
Query: 155 AKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALIS 214
+ G +G A+ S ++++ T +I+ Y++ AL +FR++ +L W ++IS
Sbjct: 296 IRLGKEIHGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSIIS 354
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG-Y 273
G Q +A + +M G + + L+S++ CA +A + GK+ H ++ +
Sbjct: 355 GYAQLNKSEEASHLLREMLVAGFQ-PNSITLASILPLCARIANLQHGKEFHCYILRRKCF 413
Query: 274 ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDD 333
+ + N+LVD+YAK +VAAK + MS++D V++TS+I G G+ ALAL+ +
Sbjct: 414 KDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKE 473
Query: 334 MVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSG 393
M + +KP+ VT V ++ ACS+ LV +G LF M +YGI+P LQH++C++DL+ R+G
Sbjct: 474 MTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAG 533
Query: 394 HLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSN 453
L +A+++I MP P TWA LL+AC HGNTQ+ A+KLL +KPE+P Y+L++N
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIAN 593
Query: 454 VYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRK 513
+YA A W +++VR +M VKK+PG + ID +F G+TS P L+
Sbjct: 594 MYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDG 653
Query: 514 LDAEMRKRGYVPDTSYVLHDMDQQEKE 540
L+ M+ + Y ++ + ++E
Sbjct: 654 LNQLMKD-----NAGYAINKVQSSDEE 675
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 215/448 (47%), Gaps = 11/448 (2%)
Query: 12 SQLSSVARQSPFLTK-KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR 70
S LS+ FL ++HA I SG+ H L+ Y L +A + +
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
+ W ++++ L ++ + ++ +G +PD F + +++KAC L V G+
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE--TLDVAFGRV 165
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGR 190
VH +S Y + V + L+ MY +F R +FD + +++SW A+I+ YA G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 191 RSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
SEA LF + + ++ W + G +Q+GN V A +MR ++ DP+ +
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSL-DPVAMI 284
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
+ AC+ + LGK++HGL I Y+ + N L+ MY+KC DL A +F +
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
+ +W SII G AQ ++EEA L +M+ A +PN +T ++ C+ + + G+
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
++ K + L+D++++SG + A+ + M DE T+ +L+ + G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGE 463
Query: 427 TQMAVRIADKLL--CLKPEDPSSYILLS 452
+A+ + ++ +KP+ + +LS
Sbjct: 464 GGVALALFKEMTRSGIKPDHVTVVAVLS 491
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 244/470 (51%), Gaps = 7/470 (1%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H + K+GL N L+ Y KCG L + Q+FD +P RD VS+ S++
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
L A + + + + ++++I A + G + + D +
Sbjct: 202 LIVSARELFDLMPME--MKNLISWNSMISGYAQ-----TSDGVDIASKLFADMPEKDLIS 254
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++++D Y K G + + +FD + + ++W MI GYA+ G A LF + P++++
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
A+ ++++G VQ+ ++A F M +E + D L V+ A A L +H
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
++ + + AL+DMY+KC + A +F + K + W ++I G A HG E
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
A + + +KP+++TFVG++ ACS+ GLV +G F M + I+P LQHY C++
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMV 494
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
D+ SRSG ++ A+NLI MPV P++ W L+AC HH + +A L+ +PS
Sbjct: 495 DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS 554
Query: 447 SYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYA 496
SY+LLSN+YA MW++V +VR +M ++++K PG S I+L H F+
Sbjct: 555 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 204/438 (46%), Gaps = 32/438 (7%)
Query: 25 TKKLHAQIIKSGLSQHEPFPNTLLDAYG-----------KCGLLQDALQLFDTLPHRDLV 73
++H ++IK+G+ ++ ++ A+ +C + + F D
Sbjct: 28 VNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPF 87
Query: 74 SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
W +V+ + + P +AL + +L G D F S ++KAC+ +G V G Q+H
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG--FVKGGMQIHG 145
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
+ +D +++ L+ +Y K G R +FD + +S+S+ +MI GY + G
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 194 ALRLFRESP--YKNLFAWTALISGLVQSGNGVD-AFYTFVKMRQEGITIADPLVLSSVVG 250
A LF P KNL +W ++ISG Q+ +GVD A F M ++ D + +S++
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK-----DLISWNSMID 260
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
E K GL + V + ++D YAK + AK +F +M +DVV+
Sbjct: 261 GYVKHGRIEDAK---GLFDVMPRRDVVTWA-TMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 311 WTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
+ S++ G Q+ EAL ++ DM + + P++ T V ++ A + +G +SK + +
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 370 VE-DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
VE + + L L+D++S+ G + A + + + W A++ HG +
Sbjct: 377 VEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHGLGE 433
Query: 429 MAVRIADKL--LCLKPED 444
A + ++ L LKP+D
Sbjct: 434 SAFDMLLQIERLSLKPDD 451
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 259/498 (52%), Gaps = 45/498 (9%)
Query: 26 KKLHAQIIKSGLS-QHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
K +H ++ L +E L++ Y +CG L D + + R++V+W S++S
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG--PLHVNQGKQVHAHFLLSPYAN 142
+ +AL + R ++ Q +PD F ++ I AC N G PL GKQ+H H + + +
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL----GKQIHGHVIRTD-VS 437
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
D+ V+++L+DMY+K SG A +F +
Sbjct: 438 DEFVQNSLIDMYSK-------------------------------SGSVDSASTVFNQIK 466
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
++++ W +++ G Q+GN V+A F M + + + L+ V+ AC+++ E GK
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLA-VIQACSSIGSLEKGK 525
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
VH +I G + +F AL+DMYAKC DL AA+ +F MS + +VSW+S+I HG
Sbjct: 526 WVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG 584
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+ A++ ++ MV + KPNEV F+ ++ AC + G V +G+ F ++++ +G+ P+ +H+
Sbjct: 585 RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHF 643
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
C +DL SRSG L EA I+ MP D W +L++ C+ H + I + L +
Sbjct: 644 ACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVT 703
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHP 502
+D Y LLSN+YA WE ++R M +KK PGYS I++ ++ F AGE +
Sbjct: 704 DDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRI 763
Query: 503 MKDEI---LGLMRKLDAE 517
DEI LG ++ L E
Sbjct: 764 QTDEIYRFLGNLQNLTNE 781
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 211/428 (49%), Gaps = 52/428 (12%)
Query: 18 ARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWAS 77
+R+ + K+H +IIK G+ +LL YG+ G L DA ++FD +P RDLV+W++
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 78 VLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
++S+C +AL + + ++ G +PD ++++ CA +G L + + VH
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRI--ARSVHGQITR 230
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
+ D+ + ++L+ MY+K G +F+ I+ N++SWTAMIS Y R +ALR
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
F E M + GI + + L SV+ +C + +
Sbjct: 291 FSE-------------------------------MIKSGIE-PNLVTLYSVLSSCGLIGL 318
Query: 258 WELGKQVHGLVI----GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
GK VHG + YES +S ALV++YA+C L + + +S +++V+W S
Sbjct: 319 IREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNS 375
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL----FRSM 369
+I A G +AL L+ MV+ R+KP+ T I AC N GLV G+ + R+
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQM 429
V D ++ S L+D++S+SG +D A + + TW ++L +GN+
Sbjct: 436 VSDEFVQNS------LIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSMLCGFSQNGNSVE 488
Query: 430 AVRIADKL 437
A+ + D +
Sbjct: 489 AISLFDYM 496
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 210/442 (47%), Gaps = 76/442 (17%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ + +H QI + E N+LL Y KCG L + ++F+ + ++ VSW +++S+ N
Sbjct: 220 IARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN 279
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL---LSPY 140
+AL ++ G +P+ +++ +C +G + +GK VH + L P
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL--IREGKSVHGFAVRRELDP- 336
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
N + + LV++YA+ G V +S N ++W ++IS YA G +AL LFR+
Sbjct: 337 -NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
V R + D L+S + AC N + L
Sbjct: 396 ----------------------------MVTQRIK----PDAFTLASSISACENAGLVPL 423
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
GKQ+HG VI S F+ N+L+DMY+K + +A +F ++ + VV+W S++ G +Q
Sbjct: 424 GKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
+G + EA++L+D M + ++ NEVTF+ +I ACS++G + KG+ + ++ G+K L
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS-GLK-DLF 540
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMP---------------------------------- 406
T L+D++++ G L+ AE + R M
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600
Query: 407 VSPDEPTWAALLSACKHHGNTQ 428
P+E + +LSAC H G+ +
Sbjct: 601 TKPNEVVFMNVLSACGHSGSVE 622
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 223/436 (51%), Gaps = 40/436 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
L +LHA ++ +G + +P P T L+++Y G + +F+ P+ D + VL C
Sbjct: 16 LVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYG-VLIKC 74
Query: 83 NL-ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
N+ +L A+ + L+ + Q FVF ++++ACA H++ G +VH +
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSRE-HLSVGGKVHGRIIKGGVD 133
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+D V++++L+ MY + +G S+A ++F
Sbjct: 134 DDAVIETSLLCMYGQ-------------------------------TGNLSDAEKVFDGM 162
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
P ++L AW+ L+S +++G V A F M +G+ D + + SVV CA L +
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE-PDAVTMISVVEGCAELGCLRIA 221
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+ VHG + ++ + N+L+ MY+KC DL++++ IF ++++K+ VSWT++I +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
+E+AL + +M+ + ++PN VT ++ +C +GL+ +G+++ V + P+ +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE-LDPNYES 340
Query: 382 YT-CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
+ L++L++ G L + E ++R + + W +L+S H G A+ + +++
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 441 KPEDPSSYILLSNVYA 456
+ + P ++ L S++ A
Sbjct: 400 RIK-PDAFTLASSISA 414
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 260/530 (49%), Gaps = 71/530 (13%)
Query: 60 ALQLFDTLPHRD--LVSWASVLSACNLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKA 116
A +LFD P RD +S + + + P + ++ R L + F PD+F F+TL K+
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD-SFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 117 CANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI 176
C+ + V QG Q+H+ + D V + +VDMYAKFG R FD + + +
Sbjct: 88 CS--LSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 177 SWTAMISGYARSGRRSEALRLFRESPY-KNLFAWTALISGLVQSGNGVDAFYTFVKMR-- 233
SWTA+ISGY R G A +LF + P+ K++ + A++ G V+SG+ A F +M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
Query: 234 -------------------------------------------------QEGI------- 237
QEGI
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 238 --TIADP--LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
T DP + + SV+ A ++ LG+ H V + V + A++DMY+KC ++
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 294 VAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYAC 353
AK IF EM K V SW ++I G A +G A AL L+ M+ KP+E+T + +I AC
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITAC 384
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
++ GLV +GR F M E G+ ++HY C++DL R+G L EAE+LI MP P+
Sbjct: 385 NHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 414 WAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMV 473
++ LSAC + + + A RI K + L+P++ +Y+LL N+YA W++ V+ +M
Sbjct: 444 LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 474 KEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGY 523
+ KKE G S I++ F +G+T+HP + I ++ L M + Y
Sbjct: 504 NQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 128/279 (45%), Gaps = 20/279 (7%)
Query: 176 ISWTAMISGYARSGRRSEALRLFRESPYKN-LFAWTALISGLVQSGNGVDAFYTFVKMRQ 234
IS +A+ GYAR +LF + P ++ F ++I +++ D+F + +R+
Sbjct: 19 ISASAVGIGYAR--------KLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRK 70
Query: 235 EGITIADPLVLSSVVGACA-NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
E D +++ +C+ ++ V++ G Q+H + G+ + +++S +VDMYAK +
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQ-GLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKM 129
Query: 294 VAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYAC 353
A+ F EM + VSWT++I G + G+ + A L+D M + + V + ++
Sbjct: 130 GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGF 186
Query: 354 SNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPT 413
G ++ R LF M I +T ++ + +D A L MP + +
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFDAMP-ERNLVS 240
Query: 414 WAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLS 452
W ++ + Q +R+ ++ DP +LS
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 49/295 (16%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-CNLAN----------LPHRALS 93
N ++D + K G + A +LFD + H+ +++W +++ CN+ + +P R L
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV 239
Query: 94 ISRSL---------------LHQGFQ------PDHFVFSTLIKACANMGPLHVNQGKQVH 132
++ L Q Q PD +++ A ++ G L + G+ H
Sbjct: 240 SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL--GEWCH 297
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
V + ++DMY+K G + + +FD + SW AMI GYA +G
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 193 EALRLF-----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT--IADPLVL 245
AL LF E P + A+I+ G + F MR+ G+ I +
Sbjct: 358 AALDLFVTMMIEEKP--DEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCM 415
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
++G +L K+ L+ + +E I ++ + + D+ A+ I
Sbjct: 416 VDLLGRAGSL------KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 239/462 (51%), Gaps = 31/462 (6%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H ++K+G + LL Y CG + L++F+ +P ++V+W S++S N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
A+ R + G + + + L+ AC + GK H FL
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCK--DIVTGKWFHG-FL----------- 234
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
G Y F S N I T++I YA+ G A LF P + L
Sbjct: 235 -------QGLGFDPY----FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+W ++I+G Q+G+ +A F+ M GI D + SV+ A +LG+ +H
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAY 342
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
V G+ I ALV+MYAK D +AK F ++ +KD ++WT +I+G A HG EA
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402
Query: 328 LALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
L+++ M P+ +T++G++YACS++GLV +G+ F M + +G++P+++HY C++
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMV 462
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
D+ SR+G +EAE L++TMPV P+ W ALL+ C H N ++ RI + + +PE+
Sbjct: 463 DILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRI--RSMVAEPEELG 520
Query: 447 S--YILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
S Y+LLSN+YA A W +V +R+ M K V K G+S ++
Sbjct: 521 SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 240/519 (46%), Gaps = 83/519 (15%)
Query: 3 LSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGL---LQD 59
+ +H + SQL + +S +LH +IKS + ++ + L+D C L
Sbjct: 2 MKKHYKPILSQLENC--RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSY 59
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
A +F+++ + W S++ + + P +AL + +L +G+ PD+F F ++KAC+
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS- 118
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
G + G VH + + + + V + L+ MY G +YG VF+ I N ++W
Sbjct: 119 -GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWG 177
Query: 180 AMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
++ISG+ + R S+A+ FRE +QS NGV A T +
Sbjct: 178 SLISGFVNNNRFSDAIEAFRE----------------MQS-NGVKANETI---------M 211
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYES--------CVFISNALVDMYAKCS 291
D LV G C ++ GK HG + GLG++ V ++ +L+DMYAKC
Sbjct: 212 VDLLV---ACGRCKDIVT---GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
DL A+Y+F M + +VSW SII G +Q+G AEEAL ++ DM+ + P++VTF+ +I
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 352 A-----CSNVGLVSKGRALFRSMVEDYGIKPSLQH------------------------- 381
A CS +G V+D I +L +
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA 385
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMP----VSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+T ++ + GH +EA ++ + M +PD T+ +L AC H G + R ++
Sbjct: 386 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
Query: 438 LCLKPEDPS--SYILLSNVYAGASMWENVSKVRKLMMVK 474
L +P+ Y + ++ + A +E ++ K M VK
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 256/499 (51%), Gaps = 43/499 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K +HA+II S P N LLD Y CG +++A +F + + +LVSW S++S C+
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 84 LANLPHRALSISRSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+A+ + R LL +PD + FS I A A P GK +H Y
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE--PERFVHGKLLHGQVTKLGYER 435
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V +TL+ MY K + + VFD +
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKE------------------------------ 465
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
+++ WT +I G + GN A F++M +E +D LSSV+GAC+++A+ G+
Sbjct: 466 -RDVVLWTEMIVGHSRLGNSELAVQFFIEMYREK-NRSDGFSLSSVIGACSDMAMLRQGE 523
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
H L I G++ + + ALVDMY K A+ IF S D+ W S++ +QHG
Sbjct: 524 VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHG 583
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
E+AL+ ++ ++ P+ VT++ L+ ACS+ G +G+ L+ M E GIK +HY
Sbjct: 584 MVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHY 642
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPT-WAALLSACKHHGNTQMAVRIADKLLCLK 441
+C+++L S++G +DEA LI P ++ W LLSAC + N Q+ + A+++L L
Sbjct: 643 SCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLD 702
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDL-GKESHVFYAGETS 500
PED +++ILLSN+YA WE+V+++R+ + K+PG S I++ + VF +G+ S
Sbjct: 703 PEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQS 762
Query: 501 HP-----MKDEILGLMRKL 514
+P +DE+ L R +
Sbjct: 763 NPEVVSQAQDELNRLKRNM 781
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 194/416 (46%), Gaps = 35/416 (8%)
Query: 23 FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
+ L++QIIK G S + ++L Y CG L+ A ++FD + +RD V+W +++
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGS 275
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ L R++L G P F +S ++ C+ +G + GK +HA ++S
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL--GKLIHARIIVSDSLA 333
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
D + + L+DMY G EA +F
Sbjct: 334 DLPLDNALLDMYCS-------------------------------CGDMREAFYVFGRIH 362
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
NL +W ++ISG ++G G A + ++ + D S+ + A A + GK
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+HG V LGYE VF+ L+ MY K + +A+ +F M +DVV WT +IVG ++ G
Sbjct: 423 LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLG 482
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+E A+ + +M + + + + +I ACS++ ++ +G +F + G +
Sbjct: 483 NSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVC 541
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
L+D++ ++G + AE + ++ +PD W ++L A HG + A+ +++L
Sbjct: 542 GALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 201/415 (48%), Gaps = 45/415 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFP---NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
+++HA ++ +G P N L+ Y +CG L+ A ++FD +PHR++VS+ ++ SA
Sbjct: 114 RQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY 173
Query: 83 NL-ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ + A ++ + + +P+ F++L++ CA + V G +++ + Y+
Sbjct: 174 SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE--DVLMGSSLNSQIIKLGYS 231
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
++ VV+++++ MY+ G + R +FD +++ ++++W MI G ++ + + L FR
Sbjct: 232 DNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFR-- 289
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP--LVLSSVVGACANLAVWE 259
L+SG+ DP S V+ C+ L +
Sbjct: 290 --------NMLMSGV------------------------DPTQFTYSIVLNGCSKLGSYS 317
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
LGK +H +I + + + NAL+DMY C D+ A Y+F + ++VSW SII G +
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 320 QHGQAEEALALYDDMVSARV-KPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
++G E+A+ +Y ++ +P+E TF I A + G+ L V G + S
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK-LLHGQVTKLGYERS 436
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
+ T LL ++ ++ + A+ + M D W ++ GN+++AV+
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVGHSRLGNSELAVQF 490
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 198/431 (45%), Gaps = 60/431 (13%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSW---ASVLSACNLANLPHRALSISRSLLHQ 101
N L+ Y +C L+ A ++FD +P R++V+ ++V ++ + H + S
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 102 GFQPDHFVFSTLI---KACANMGPLHVNQGKQVHAHFLL--------SPYANDDVVKSTL 150
F P + + S+++ + C ++ L + +Q+HA L SPYAN++
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLK--RARQIHALVLTAGAGAATESPYANNN------ 137
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT 210
+IS Y R G +A ++F + P++N+ ++
Sbjct: 138 ------------------------------LISMYVRCGSLEQARKVFDKMPHRNVVSYN 167
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADP--LVLSSVVGACANLAVWELGKQVHGLV 268
AL S S N A Y F P +S+V CA L +G ++ +
Sbjct: 168 ALYSAY--SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI 225
Query: 269 IGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEAL 328
I LGY V + +++ MY+ C DL +A+ IF ++ +D V+W ++IVG+ ++ + E+ L
Sbjct: 226 IKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGL 285
Query: 329 ALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF-RSMVEDYGIKPSLQHYTCLLD 387
+ +M+ + V P + T+ ++ CS +G S G+ + R +V D L + LLD
Sbjct: 286 MFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN--ALLD 343
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
++ G + EA + + +P+ +W +++S C +G + A+ + +LL + P
Sbjct: 344 MYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 448 YILLSNVYAGA 458
Y + + A A
Sbjct: 403 YTFSAAISATA 413
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 246/465 (52%), Gaps = 40/465 (8%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H IK+G ++ N + Y A ++F++L +DLV+W +++S+ N A
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
L A+S+ + + G +PD F F +L+ ++ L ++V
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL--------------------EMV 408
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++ ++ KFGL SS IS A+IS Y+++G+ +A LF S KNL
Sbjct: 409 QACII----KFGL-----------SSKIEIS-NALISAYSKNGQIEKADLLFERSLRKNL 452
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITI-ADPLVLSSVVGACANLAVWELGKQVH 265
+W A+ISG +G + F + + + I D LS+++ C + + LG Q H
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
V+ G I NAL++MY++C + + +F +MS KDVVSW S+I ++HG+ E
Sbjct: 513 AYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGE 572
Query: 326 EALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
A+ Y M +V P+ TF ++ ACS+ GLV +G +F SMVE +G+ ++ H++C
Sbjct: 573 NAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC 632
Query: 385 LLDLFSRSGHLDEAENLIRT--MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
L+DL R+GHLDEAE+L++ + W AL SAC HG+ ++ +A L+ +
Sbjct: 633 LVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEK 692
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDL 487
+DPS Y+ LSN+YAGA MW+ + R+ + + K+ G S + L
Sbjct: 693 DDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 185/384 (48%), Gaps = 47/384 (12%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVS-WASVLSACNLANLPHRALSISRSLLHQGF 103
TLL A K G ++ A ++FD +P RD V+ W ++++ C + ++ + R + G
Sbjct: 127 TTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+ D F F+T++ C + G L + GKQVH+ + + + V + L+ MY +
Sbjct: 187 RHDKFGFATILSMC-DYGSL--DFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDA 243
Query: 164 RAVFDS--ISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGN 221
VF+ ++ + +++ +I G A +R E+L +FR
Sbjct: 244 CLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFR---------------------- 280
Query: 222 GVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISN 281
KM + + D L SV+G+C+ A +G QVHGL I GYE +SN
Sbjct: 281 ---------KMLEASLRPTD-LTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSN 327
Query: 282 ALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP 341
A + MY+ D AA +F + KD+V+W ++I Q + A+++Y M VKP
Sbjct: 328 ATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKP 387
Query: 342 NEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL 401
+E TF L+ ++ ++ + ++ + +G+ ++ L+ +S++G +++A+ L
Sbjct: 388 DEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAYSKNGQIEKAD-L 442
Query: 402 IRTMPVSPDEPTWAALLSACKHHG 425
+ + + +W A++S H+G
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNG 466
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 163/351 (46%), Gaps = 23/351 (6%)
Query: 103 FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
+PD + S I ++ G QVH + + S V +TL+ +Y + G
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIF--GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLAS 110
Query: 163 GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFA-WTALISGLVQSGN 221
+ FD I + SWT ++S + G A +F + P ++ A W A+I+G +SG
Sbjct: 111 LKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGY 170
Query: 222 GVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISN 281
+ F +M + G+ D ++++ C + + GKQVH LVI G+ + N
Sbjct: 171 HETSVELFREMHKLGVR-HDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVN 228
Query: 282 ALVDMYAKCSDLVAAKYIFCE--MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARV 339
AL+ MY C +V A +F E ++ +D V++ +I G A + +E+L ++ M+ A +
Sbjct: 229 ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF-KRDESLLVFRKMLEASL 287
Query: 340 KPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL----LDLFSRSGHL 395
+P ++TFV ++ +CS + + V IK + YT + + ++S
Sbjct: 288 RPTDLTFVSVMGSCSCAAMGHQ--------VHGLAIKTGYEKYTLVSNATMTMYSSFEDF 339
Query: 396 DEAENLIRTMPVSPDEPTWAALLSACKHH--GNTQMAVRIADKLLCLKPED 444
A + ++ D TW ++S+ G + M+V ++ +KP++
Sbjct: 340 GAAHKVFESLE-EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDE 389
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 7 AYALKSQLS-SVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
AY L + LS V+ S L + HA +++ G + N L++ Y +CG +Q++L++F+
Sbjct: 489 AYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLH 124
+ +D+VSW S++SA + A++ +++ +G PD FS ++ AC++ G
Sbjct: 549 QMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL-- 606
Query: 125 VNQGKQV 131
V +G ++
Sbjct: 607 VEEGLEI 613
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
++GL +SG +A F + + D +S + +L G QVH I G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
+SN L+ +Y + +L + K F E+ DV SWT+++ + + G E A ++D
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
M + + + +I C G LFR M
Sbjct: 148 KMPE---RDDVAIWNAMITGCKESGYHETSVELFREM 181
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 252/467 (53%), Gaps = 16/467 (3%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC---N 83
+LH +KSG +L+ Y +CG A ++F+ +PH+ +V++ + +S
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ NL ++ R + +P+ F I ACA++ L++ G+Q+H + + +
Sbjct: 210 VMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASL--LNLQYGRQLHGLVMKKEFQFE 265
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSIS-SLNSISWTAMISGYARSGRRSEALRLFRESP 202
+V + L+DMY+K VF + + N ISW ++ISG +G+ A+ LF +
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 203 YKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
+ L W +LISG Q G ++AF F +M + + L+S++ AC+++
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV-VMVPSLKCLTSLLSACSDIWTL 384
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF--CEMSRKDVVSWTSIIV 316
+ GK++HG VI E +F+ +L+DMY KC A+ IF E KD V W +I
Sbjct: 385 KNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
G +HG+ E A+ +++ + +V+P+ TF ++ ACS+ G V KG +FR M E+YG K
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADK 436
PS +H C++DL RSG L EA+ +I M ++LL +C+ H + + A K
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMK 563
Query: 437 LLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS 483
L L+PE+P+ +++LS++YA WE+V +R+++ K++ K PG S
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 224/512 (43%), Gaps = 60/512 (11%)
Query: 1 MSLSRHAYALKSQLSSVARQSPFLTKK-LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
+S S + + L S A+ + + LHAQ++K+G L+ Y K + D
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
AL++ D +P R + S + +S A + G + ++++ C +
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD 144
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWT 179
+ G Q+H + S + + V ++LV MY++ G W
Sbjct: 145 -----IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCG------------------EWV 181
Query: 180 AMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSG--NGVDAFYTFVKMRQEGI 237
A R+F + P+K++ + A ISGL+++G N V + + MR+
Sbjct: 182 L-------------AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNL--MRKFSS 226
Query: 238 TIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAK 297
+ + + + ACA+L + G+Q+HGLV+ ++ + AL+DMY+KC +A
Sbjct: 227 EEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAY 286
Query: 298 YIFCEMS-RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+F E+ ++++SW S+I G +GQ E A+ L++ + S +KP+ T+ LI S +
Sbjct: 287 IVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQL 346
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL---IRTMPVSPDEPT 413
G V + F M+ + PSL+ T LL S L + + + D
Sbjct: 347 GKVIEAFKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Query: 414 WAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMV 473
+L+ G + A RI D+ KP+DP + ++ + Y E+ ++ +L+
Sbjct: 406 LTSLIDMYMKCGLSSWARRIFDRFEP-KPKDPVFWNVMISGYGKHGECESAIEIFELL-- 462
Query: 474 KEVKKEPGYS-----------CIDLGKESHVF 494
+E K EP + C ++ K S +F
Sbjct: 463 REEKVEPSLATFTAVLSACSHCGNVEKGSQIF 494
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 64/383 (16%)
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
++NL S+ L H P+ F F L+K+CA +G V QG+ +HA + + + D
Sbjct: 11 VSNLVTGGTSLDVILSHS---PNKFTFPPLLKSCAKLG--DVVQGRILHAQVVKTGFFVD 65
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ LV MY K + ++AL++ E P
Sbjct: 66 VFTATALVSMYMKV-------------------------------KQVTDALKVLDEMPE 94
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+ + + A +SGL+++G DAF F R G + + + ++SV+G C ++ E G Q
Sbjct: 95 RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM-NSVTVASVLGGCGDI---EGGMQ 150
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H L + G+E V++ +LV MY++C + V A +F ++ K VV++ + I G ++G
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 324 AEEALALYDDMVS-ARVKPNEVTFVGLIYACSNV----------GLVSKGRALFRSMVED 372
++++ M + +PN+VTFV I AC+++ GLV K F +MV
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG- 269
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
T L+D++S+ A + + + + +W +++S +G + AV
Sbjct: 270 ----------TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 433 IADKLLC--LKPEDPSSYILLSN 453
+ +KL LKP+ + L+S
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISG 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 20/280 (7%)
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
+S LV G +D + + ++ +CA L G+ +H V+ G
Sbjct: 11 VSNLVTGGTSLDVILSHS---------PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTG 61
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
+ VF + ALV MY K + A + EM + + S + + G ++G +A ++
Sbjct: 62 FFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFG 121
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
D + N VT ++ C ++ +G + G + + T L+ ++SR
Sbjct: 122 DARVSGSGMNSVTVASVLGGCGDI----EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC 177
Query: 393 GHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLS 452
G A + +P T+ A +S +G + + + + E+P+ ++
Sbjct: 178 GEWVLAARMFEKVP-HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVN 236
Query: 453 NVYAGASMWENVSKVRK---LMMVKEVKKEP--GYSCIDL 487
+ A AS+ N+ R+ L+M KE + E G + ID+
Sbjct: 237 AITACASLL-NLQYGRQLHGLVMKKEFQFETMVGTALIDM 275
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 234/463 (50%), Gaps = 38/463 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H + K G N+L+ YG CG ++A ++F +P RD+VSW +++
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L AL + +P+ + ++ + +G L + GK +H L
Sbjct: 186 GLYKEALD---TFSKMDVEPNLATYVCVLVSSGRVGCLSL--GKGIHGLILKRASLISLE 240
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ L+DMY K VF + + +SW +MISG R EA+ LF
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF------- 293
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
L+Q+ +G+ D +L+SV+ ACA+L + G+ VH
Sbjct: 294 ---------SLMQTSSGIK---------------PDGHILTSVLSACASLGAVDHGRWVH 329
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
++ G + I A+VDMYAKC + A IF + K+V +W +++ G A HG
Sbjct: 330 EYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGL 389
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM-VEDYGIKPSLQHYTC 384
E+L +++MV KPN VTF+ + AC + GLV +GR F M +Y + P L+HY C
Sbjct: 390 ESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC 449
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN-TQMAVRIADKLLCLKPE 443
++DL R+G LDEA L++ MPV PD A+LSACK+ G ++ I D L ++ E
Sbjct: 450 MIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFE 509
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
D Y+LLSN++A W++V+++R+LM VK + K PG S I+
Sbjct: 510 DSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 174/374 (46%), Gaps = 44/374 (11%)
Query: 74 SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
S+ ++LS+ + + P + ++ + GF PD F F + KAC + +GKQ+H
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG--IREGKQIHG 130
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
+ +D V+++LV Y G VF + + +SWT +I+G+ R+G E
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 194 ALRLFRESPYK-NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
AL F + + NL + + LV SG
Sbjct: 191 ALDTFSKMDVEPNLATYVCV---LVSSG-------------------------------- 215
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
+ LGK +HGL++ + NAL+DMY KC L A +F E+ +KD VSW
Sbjct: 216 -RVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWN 274
Query: 313 SIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
S+I G +++EA+ L+ M S+ +KP+ ++ AC+++G V GR + ++
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT 334
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
GIK T ++D++++ G+++ A + + S + TW ALL HG+ ++
Sbjct: 335 A-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGHGLESL 392
Query: 432 RIADKL--LCLKPE 443
R +++ L KP
Sbjct: 393 RYFEEMVKLGFKPN 406
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 103 FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG-LPD 161
+ P+ V LI C+++ KQ+ + DD++ + +V K
Sbjct: 2 YLPEKSVLLELISRCSSLRVF-----KQIQTQLITRDLLRDDLIINKVVTFLGKSADFAS 56
Query: 162 YGRAVFDSISS-LNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSG 220
Y + SI S L+S S+ ++S YA + P +FA+ +S
Sbjct: 57 YSSVILHSIRSVLSSFSYNTLLSSYAVC-----------DKPRVTIFAYKTFVS------ 99
Query: 221 NGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFIS 280
NG D V AC + GKQ+HG+V +G+ +++
Sbjct: 100 NGFSP---------------DMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQ 144
Query: 281 NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
N+LV Y C + A +F EM +DVVSWT II G + G +EAL + M V+
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVE 201
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
PN T+V ++ + VG +S G+ + +++ + SL+ L+D++ + L +A
Sbjct: 202 PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL-ISLETGNALIDMYVKCEQLSDAMR 260
Query: 401 LIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASM 460
+ + D+ +W +++S H ++ A+ + + P +IL S + A AS+
Sbjct: 261 VFGELE-KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 3/178 (1%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K +H I+K N L+D Y KC L DA+++F L +D VSW S++S
Sbjct: 222 LGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLV 281
Query: 84 LANLPHRALSI-SRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
A+ + S G +PD + ++++ ACA++G V+ G+ VH + L +
Sbjct: 282 HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA--VDHGRWVHEYILTAGIKW 339
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
D + + +VDMYAK G + +F+ I S N +W A++ G A G E+LR F E
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEE 397
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 245/472 (51%), Gaps = 10/472 (2%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPH-RDLVSWASVLSACNLANLPHRALSISRSLLHQGF 103
N ++ AY + G + AL +F P D +SW ++++ AL ++ S+ G
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+ D F ++ +++ L + GK+VHA L + ++ V S +VD+Y K G Y
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKI--GKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYA 314
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISG---LVQSG 220
+ N S ++MI GY+ G+ EA RLF KNL WTA+ G L Q
Sbjct: 315 ESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPD 374
Query: 221 NGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFIS 280
+ ++ F+ D LV+ SV+GAC+ A E GK++HG + G +
Sbjct: 375 SVLELARAFIANE---TNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 281 NALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
A VDMY+KC ++ A+ IF +D V + ++I G A HG ++ ++DM K
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
P+E+TF+ L+ AC + GLV +G F+SM+E Y I P HYTC++DL+ ++ LD+A
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 401 LIRTM-PVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGAS 459
L+ + V D A L+AC + NT++ + +KLL ++ + S YI ++N YA +
Sbjct: 552 LMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSG 611
Query: 460 MWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLM 511
W+ + ++R M KE++ G S ++ K+ H+F + + SH + I ++
Sbjct: 612 RWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/534 (23%), Positives = 231/534 (43%), Gaps = 80/534 (14%)
Query: 29 HAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLP 88
H + IKSG + N L++ Y K GLL++A +FD + R++ SW +V++A N
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 89 HRALS-----------ISRSLLHQGFQP-------------------------DHFVFST 112
A I+ + L GF D F +T
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDS--I 170
++K A + +V G+Q+H + + S+L+ MY+K G +F+ +
Sbjct: 131 MVKLSAKL--TNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCV 188
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKN-LFAWTALISGLVQSGNGVDAFYTF 229
++S++ AMI+ Y R G +AL +F +P N +W LI+G Q+G +A
Sbjct: 189 EFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMA 248
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
V M + G+ D +V+ ++L ++GK+VH V+ G S F+S+ +VD+Y K
Sbjct: 249 VSMEENGLKW-DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK 307
Query: 290 CSD-------------------------------LVAAKYIFCEMSRKDVVSWTSIIVGT 318
C + +V AK +F +S K++V WT++ +G
Sbjct: 308 CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Query: 319 AQHGQAEEALALYDDMVSARVK-PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
Q + L L ++ P+ + V ++ ACS + G+ + + GI
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILM 426
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+ T +D++S+ G+++ AE + + D + A+++ C HHG+ + + + +
Sbjct: 427 DKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM 485
Query: 438 L--CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG-YSC-IDL 487
KP++ + LLS + E + ++ + E G Y+C IDL
Sbjct: 486 TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDL 539
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H +++G+ + +D Y KCG ++ A ++FD+ RD V + ++++ C A
Sbjct: 413 KEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGC--A 470
Query: 86 NLPHRALSIS--RSLLHQGFQPDHFVFSTLIKACANMG 121
+ H A S + GF+PD F L+ AC + G
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRG 508
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 239/463 (51%), Gaps = 37/463 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K H ++KSG+ +LLD Y KCG + +A ++F+ H DLV W +++
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ ALS+ + + +P+ ++++ C + L + G+ VH + D
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL--GRSVHG-LSIKVGIWDTN 378
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V + LV MYAK + VF+ S + ++W ++ISG++++G EAL LF
Sbjct: 379 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFH------ 432
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+M E +T + + ++S+ ACA+L +G +H
Sbjct: 433 -------------------------RMNSESVT-PNGVTVASLFSACASLGSLAVGSSLH 466
Query: 266 GLVIGLGY--ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+ LG+ S V + AL+D YAKC D +A+ IF + K+ ++W+++I G + G
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+L L+++M+ + KPNE TF ++ AC + G+V++G+ F SM +DY PS +HYT
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C++D+ +R+G L++A ++I MP+ PD + A L C H + + K+L L P+
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD 646
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
D S Y+L+SN+YA W +VR LM + + K G+S ++
Sbjct: 647 DASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/469 (30%), Positives = 225/469 (47%), Gaps = 51/469 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNT----LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA 81
KK+H Q++K F N LLD Y KCG ++ A ++F+ + R++V W S+++
Sbjct: 162 KKIHCQLVKV-----PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+L L + + + + + TLI AC + LH QGK H + S
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH--QGKWFHGCLVKSGIE 274
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+ ++L+DMY K G R VF+ S ++ + WTAMI GY +G +EAL LF++
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK- 333
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
+ G V+++ +TIA SV+ C + ELG
Sbjct: 334 -----------MKG--------------VEIKPNCVTIA------SVLSGCGLIENLELG 362
Query: 262 KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQH 321
+ VHGL I +G ++NALV MYAKC AKY+F S KD+V+W SII G +Q+
Sbjct: 363 RSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQN 421
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
G EAL L+ M S V PN VT L AC+++G ++ G +L V+ + S H
Sbjct: 422 GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVH 481
Query: 382 Y-TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
T LLD +++ G A + T+ + TW+A++ G+T ++ + +++L
Sbjct: 482 VGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEML-K 539
Query: 441 KPEDPSSYILLSNVYA-GASMWENVSKVRKLMMVKEVKKEPG---YSCI 485
K + P+ S + A G + N K M K+ P Y+C+
Sbjct: 540 KQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 191/433 (44%), Gaps = 67/433 (15%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++ H + +GL L+ YG G +DA +FD +P D W +L L
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ + L+ GF+ D VFS +KAC + L + GK++H + P + D+V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL--DNGKKIHCQLVKVP-SFDNV 177
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V + L+DMYAK G VF+ I+ N + WT+MI+GY ++ E L LF
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN------ 231
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+MR+ + + + +++ AC L+ GK H
Sbjct: 232 -------------------------RMRENNV-LGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
G ++ G E + +L+DMY KC D+ A+ +F E S D+V WT++IVG +G
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL----FRSMVEDYGIKPSLQH 381
EAL+L+ M +KPN VT ++ C + + GR++ + + D + +L H
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVH 385
Query: 382 -------------------------YTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPT 413
+ ++ FS++G + EA L M V+P+ T
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 414 WAALLSACKHHGN 426
A+L SAC G+
Sbjct: 446 VASLFSACASLGS 458
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L + +H IK G+ N L+ Y KC +DA +F+ +D+V+W S++S +
Sbjct: 361 LGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL-LSPYAN 142
H AL + + + P+ ++L ACA++G L V G +HA+ + L A+
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV--GSSLHAYSVKLGFLAS 477
Query: 143 DDV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
V V + L+D YAK G P R +FD+I N+I+W+AMI GY + G +L LF E
Sbjct: 478 SSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEM 537
Query: 202 PYK----NLFAWTALISGLVQSG 220
K N +T+++S +G
Sbjct: 538 LKKQQKPNESTFTSILSACGHTG 560
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 214/429 (49%), Gaps = 34/429 (7%)
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF 157
L G Q + ++ L++ C +GK++HA + +A ++ +K L+ +YA
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRK--EYTKGKRIHAQMFVVGFALNEYLKVKLLILYA-- 154
Query: 158 GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLV 217
SG A LFR ++L W A+ISG V
Sbjct: 155 -----------------------------LSGDLQTAGILFRSLKIRDLIPWNAMISGYV 185
Query: 218 QSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCV 277
Q G + + + MRQ I + D +SV AC+ L E GK+ H ++I +S +
Sbjct: 186 QKGLEQEGLFIYYDMRQNRI-VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 278 FISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSA 337
+ +ALVDMY KCS +F ++S ++V++WTS+I G HG+ E L ++ M
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 338 RVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDE 397
+PN VTF+ ++ AC++ GLV KG F SM DYGI+P QHY ++D R+G L E
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 398 AENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAG 457
A + P P W +LL AC+ HGN ++ A K L L P + +Y++ +N YA
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 458 ASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAE 517
+ E SKVR+ M VKK+PGYS I+L E H F +TSH + ++I + ++ +
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSF 484
Query: 518 MRKRGYVPD 526
Y PD
Sbjct: 485 FMDIDYYPD 493
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++HAQ+ G + +E LL Y G LQ A LF +L RDL+ W +++S
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQK 187
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L L I + PD + F+++ +AC+ + L GK+ HA + ++ +
Sbjct: 188 GLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRL--EHGKRAHAVMIKRCIKSNII 245
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF------- 198
V S LVDMY K G VFD +S+ N I+WT++ISGY G+ SE L+ F
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG 305
Query: 199 -RESPYKNLFAWTALI-SGLVQSG 220
R +P L TA GLV G
Sbjct: 306 CRPNPVTFLVVLTACNHGGLVDKG 329
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 240/494 (48%), Gaps = 35/494 (7%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H + +K G E + L+D YGKC L+ A ++F +P + LV+W S++
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ I ++ +G +P ++++ AC+ L GK +H + + S D
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLL--HGKFIHGYVIRSVVNADIY 345
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V +L+D+Y K G + VF + SW MIS Y
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY-------------------- 385
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ GN A + +M G+ D + +SV+ AC+ LA E GKQ+H
Sbjct: 386 -----------ISVGNWFKAVEVYDQMVSVGVK-PDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+ E+ + +AL+DMY+KC + A IF + +KDVVSWT +I HGQ
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
EAL +D+M +KP+ VT + ++ AC + GL+ +G F M YGI+P ++HY+C+
Sbjct: 494 EALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPT-WAALLSACKHHGNTQMAVRIADKLLCLKPED 444
+D+ R+G L EA +I+ P + D + L SAC H + RIA L+ P+D
Sbjct: 554 IDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDD 613
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMK 504
S+Y++L N+YA W+ +VR M ++K+PG S I++ + F+A + SH
Sbjct: 614 ASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRA 673
Query: 505 DEILGLMRKLDAEM 518
+ + + L M
Sbjct: 674 ENVYECLALLSGHM 687
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 205/446 (45%), Gaps = 54/446 (12%)
Query: 12 SQLSSVARQSPFLTKKL------HAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
S+L S+ R+ TK L H +I+ GL + +L++ Y C A +F+
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 66 TLPHR-DLVSWASVLSACNLANLPHRALSISRSLLHQGF-QPDHFVFSTLIKACANMGPL 123
R D+ W S++S + ++ H L + + LL+ PD F F +IKA +G
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 124 HVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMIS 183
+ G+ +H + S Y D VV S+LV MYAKF L + VFD
Sbjct: 124 FL--GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFD--------------- 166
Query: 184 GYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
E P +++ +W +IS QSG A F +M G + +
Sbjct: 167 ----------------EMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE-PNSV 209
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
L+ + AC+ L E GK++H + G+E ++++ALVDMY KC L A+ +F +M
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 304 SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR 363
RK +V+W S+I G G ++ + + + M+ +P++ T ++ ACS + G+
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 364 ALFRSMVEDYGIKPSLQ---HYTC-LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
+ Y I+ + + C L+DL+ + G + AE + E +W ++S
Sbjct: 330 -----FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE-SWNVMIS 383
Query: 420 ACKHHGNTQMAVRIADKLLC--LKPE 443
+ GN AV + D+++ +KP+
Sbjct: 384 SYISVGNWFKAVEVYDQMVSVGVKPD 409
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
+++ W +L+SG ++ D F ++ I + D +V+ A L LG+ +
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H LV+ GY V ++++LV MYAK + + +F EM +DV SW ++I Q G+A
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E+AL L+ M S+ +PN V+ I ACS + + +G+ + R V+ G + +
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSA 248
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
L+D++ + L+ A + + MP W +++ G+++ V I ++++ ++
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMI-IEGTR 306
Query: 445 PSSYILLSNVYA 456
PS L S + A
Sbjct: 307 PSQTTLTSILMA 318
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 233/459 (50%), Gaps = 38/459 (8%)
Query: 35 SGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPH--RAL 92
SG +E ++L A + G ++ ++F ++P + +W ++LS +N H A+
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSG--YSNYEHYEEAI 401
Query: 93 SISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVD 152
S R + Q +PD S ++ +CA + L GKQ+H + + + + + S L+
Sbjct: 402 SNFRQMQFQNLKPDKTTLSVILSSCARLRFLE--GGKQIHGVVIRTEISKNSHIVSGLIA 459
Query: 153 MYAKFGLPDYGRAVFDS-ISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTA 211
+Y++ + +FD I+ L+ W +MISG+ N+ A
Sbjct: 460 VYSECEKMEISECIFDDCINELDIACWNSMISGFRH-----------------NMLDTKA 502
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
LI F +M Q + + ++V+ +C+ L G+Q HGLV+
Sbjct: 503 LI--------------LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS 548
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALY 331
GY S F+ AL DMY KC ++ +A+ F + RK+ V W +I G +G+ +EA+ LY
Sbjct: 549 GYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 332 DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSR 391
M+S+ KP+ +TFV ++ ACS+ GLV G + SM +GI+P L HY C++D R
Sbjct: 609 RKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGR 668
Query: 392 SGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILL 451
+G L++AE L P W LLS+C+ HG+ +A R+A+KL+ L P+ ++Y+LL
Sbjct: 669 AGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLL 728
Query: 452 SNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKE 490
SN Y+ W++ + ++ LM V K PG S G +
Sbjct: 729 SNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGND 767
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 208/440 (47%), Gaps = 83/440 (18%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGL----------------------------- 56
K +H I++ G+ N LLD Y +CG
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 57 --LQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLI 114
L +A ++FD +P RD+VSW +++S +AL + + ++ GF P F ++++
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 115 KACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG-LPDYGRAVFDSISSL 173
AC+ + L G + H + + + V + L+ MYAK G + DYG VF+S+S
Sbjct: 146 SACSKV--LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMR 233
N +S+ TA+I GL + ++A F M
Sbjct: 204 NEVSY-------------------------------TAVIGGLARENKVLEAVQMFRLMC 232
Query: 234 QEGITIADPLVLSSVVG------ACANLAVW---ELGKQVHGLVIGLGYESCVFISNALV 284
++G+ + D + LS+++ C +L+ ELGKQ+H L + LG+ + ++N+L+
Sbjct: 233 EKGVQV-DSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
++YAK D+ A+ IF EM +VVSW +IVG Q ++++++ M + +PNEV
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
T + ++ AC G V GR +F S+ + PS+ + +L +S H +EA + R
Sbjct: 352 TCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 405 MP---VSPDEPTWAALLSAC 421
M + PD+ T + +LS+C
Sbjct: 407 MQFQNLKPDKTTLSVILSSC 426
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 58/356 (16%)
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
GK +H + +D + + L+D+Y + G DY R VFD +S + SW A ++ +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
G EA +F P +++ +W +IS LV+ G A + +M +G + L+S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF-LPSRFTLAS 143
Query: 248 VVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA-AKYIFCEMSRK 306
V+ AC+ + G + HG+ + G + +F+ NAL+ MYAKC +V +F +S+
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
+ VS+T++I G A+ + EA+ ++ M V+ + V SN+ +S R
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCL-------SNILSISAPREGC 256
Query: 367 RSMVEDYGIKPSLQHY---------------TCLLDLFSRSGHLDEAENLIRTMP----- 406
S+ E YG + Q + LL++++++ ++ AE + MP
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV 316
Query: 407 -----------------------------VSPDEPTWAALLSACKHHGNTQMAVRI 433
P+E T ++L AC G+ + RI
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 234/447 (52%), Gaps = 45/447 (10%)
Query: 27 KLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+LH ++K GL + FP+T L+ YGKCGL+ +A ++F+ + RDLV W +++S+ L
Sbjct: 163 QLHCLMVKQGL-ESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLN 221
Query: 86 NLPHRALSISRSLL--HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ A + + + F+ D+F FS+L+ AC + QGKQ+HA Y D
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC------RIEQGKQIHAILFKVSYQFD 275
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V + L++MYA +S S+A F
Sbjct: 276 IPVATALLNMYA-------------------------------KSNHLSDARECFESMVV 304
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL-AVWELGK 262
+N+ +W A+I G Q+G G +A F +M E + D L +SV+ +CA A+WE+ K
Sbjct: 305 RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ-PDELTFASVLSSCAKFSAIWEI-K 362
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
QV +V G + ++N+L+ Y++ +L A F + D+VSWTS+I A HG
Sbjct: 363 QVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
AEE+L +++ M+ +++P+++TF+ ++ ACS+ GLV +G F+ M E Y I+ +HY
Sbjct: 423 FAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHY 481
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
TCL+DL R+G +DEA +++ +MP P AA C H + A KLL ++P
Sbjct: 482 TCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEP 541
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRK 469
P +Y +LSN Y W + +RK
Sbjct: 542 TKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 233/491 (47%), Gaps = 49/491 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC--N 83
K+ H ++K G+ N LL AY K DA +LFD +P R++V+W ++
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 84 LANLPHRA----LSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
+ HRA +SR +L DH F LI+ C + ++ G Q+H +
Sbjct: 116 DGDTNHRAHLGFCYLSR-ILFTDVSLDHVSFMGLIRLCTD--STNMKAGIQLHCLMVKQG 172
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
+ ++LV Y K GL R VF+++ + + W A++S Y +G EA L +
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
G D K R G D SS++ AC E
Sbjct: 233 LM--------------------GSD------KNRFRG----DYFTFSSLLSACR----IE 258
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
GKQ+H ++ + Y+ + ++ AL++MYAK + L A+ F M ++VVSW ++IVG A
Sbjct: 259 QGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
Q+G+ EA+ L+ M+ ++P+E+TF ++ +C+ + + + + ++MV G L
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFL 377
Query: 380 QHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLC 439
L+ +SR+G+L EA ++ PD +W +++ A HG + ++++ + +L
Sbjct: 378 SVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQ 436
Query: 440 -LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE-PGYSC-ID-LGKESHVFY 495
L+P+ + +LS G + E + +++ +++ E Y+C ID LG+ +
Sbjct: 437 KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDE 496
Query: 496 AGETSHPMKDE 506
A + + M E
Sbjct: 497 ASDVLNSMPTE 507
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 5/187 (2%)
Query: 12 SQLSSVARQSPFL-TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR 70
S LSS A+ S K++ A + K G + N+L+ +Y + G L +AL F ++
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
DLVSW SV+ A +L + S+L Q QPD F ++ AC++ G V +G +
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGL--VQEGLR 463
Query: 131 VHAHFL-LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSG 189
+D + L+D+ + G D V +S+ + S A +G
Sbjct: 464 CFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIH 523
Query: 190 RRSEALR 196
+ E+++
Sbjct: 524 EKRESMK 530
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 240/461 (52%), Gaps = 37/461 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR-DLVSWASVLSACNL 84
K H +I+ S N+LL Y K LL A +LF + + +W ++L
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ + + R + + G + D +++I +C+++G + + GK +H +
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL--GKSLHCY---------- 458
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
VVK++L D+ +IS +NS +I Y + G + A R+F E+
Sbjct: 459 VVKTSL-DL---------------TISVVNS-----LIDLYGKMGDLTVAWRMFCEAD-T 496
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
N+ W A+I+ V A F +M E + L +++ AC N E G+ +
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFK-PSSITLVTLLMACVNTGSLERGQMI 555
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H + +E + +S AL+DMYAKC L ++ +F ++KD V W +I G HG
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDV 615
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
E A+AL+D M + VKP TF+ L+ AC++ GLV +G+ LF M Y +KP+L+HY+C
Sbjct: 616 ESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSC 674
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPED 444
L+DL SRSG+L+EAE+ + +MP SPD W LLS+C HG +M +R+A++ + P++
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQN 734
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
YI+L+N+Y+ A WE + R++M V K G+S +
Sbjct: 735 DGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 204/429 (47%), Gaps = 42/429 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
LH +K+GL+ + +++ Y K G +A F L D+ SW S++++ +
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+ + + ++G PD V S LI M + V QGK H + ++ D V
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKM--MLVPQGKAFHGFVIRHCFSLDSTVC 369
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSL-NSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
++L+ MY KF L +F IS N +W M+ GY + + + LFR
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR------- 422
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG 266
K++ GI I D +SV+ +C+++ LGK +H
Sbjct: 423 ------------------------KIQNLGIEI-DSASATSVISSCSHIGAVLLGKSLHC 457
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
V+ + + + N+L+D+Y K DL A +FCE + +V++W ++I Q+E+
Sbjct: 458 YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEK 516
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYTCL 385
A+AL+D MVS KP+ +T V L+ AC N G + +G+ + R + E ++ + SL L
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS--AAL 574
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL--LCLKPE 443
+D++++ GHL+++ L D W ++S HG+ + A+ + D++ +KP
Sbjct: 575 IDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPT 633
Query: 444 DPSSYILLS 452
P+ LLS
Sbjct: 634 GPTFLALLS 642
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 183/412 (44%), Gaps = 44/412 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+K +A II GLS++ + L+ +Y G + ++F + RD+ W S++ A + +
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA-HFS 102
Query: 86 NLPH-RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
N + R+L S+L G PDHF ++ ACA + HV G VH L
Sbjct: 103 NGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHV--GTFVHGLVL-------- 152
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
K G D AV S + Y++ G +A +F E P +
Sbjct: 153 -----------KHGGFDRNTAVGASF-----------VYFYSKCGFLQDACLVFDEMPDR 190
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI--ADPLVLSSVVGACANLAVWELGK 262
++ AWTA+ISG VQ+G KM G + +P L AC+NL + G+
Sbjct: 191 DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR 250
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+HG + G S F+ +++ Y+K + A F E+ +D+ SWTSII A+ G
Sbjct: 251 CLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSG 310
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
EE+ ++ +M + + P+ V LI + LV +G+A F V + SL
Sbjct: 311 DMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA-FHGFVIRHCF--SLDST 367
Query: 383 TC--LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
C LL ++ + L AE L + ++ W +L K +G + V+
Sbjct: 368 VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML---KGYGKMKCHVK 416
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 145/325 (44%), Gaps = 54/325 (16%)
Query: 23 FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF---DTLPHRDLVSWASVL 79
L K LH ++K+ L N+L+D YGK G L A ++F DT ++++W +++
Sbjct: 450 LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT----NVITWNAMI 505
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
++ +A+++ ++ + F+P TL+ AC N G L +G+ +H + +
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSL--ERGQMIHRYITETE 563
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
+ + + + L+DMYAK G + R +FD+ + +++ W MISGY G A+ LF
Sbjct: 564 HEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFD 623
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
+ M + + P L +++ AC + + E
Sbjct: 624 Q-------------------------------MEESDVKPTGPTFL-ALLSACTHAGLVE 651
Query: 260 LGKQV------HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS-RKDVVSWT 312
GK++ + + L + SC LVD+ ++ +L A+ M D V W
Sbjct: 652 QGKKLFLKMHQYDVKPNLKHYSC------LVDLLSRSGNLEEAESTVMSMPFSPDGVIWG 705
Query: 313 SIIVGTAQHGQAEEALALYDDMVSA 337
+++ HG+ E + + + V++
Sbjct: 706 TLLSSCMTHGEFEMGIRMAERAVAS 730
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 252/480 (52%), Gaps = 20/480 (4%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++HA++I SG + LL + + G + ++ ++ L V A +++
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSS 97
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLI----KACANMGPLHVNQGKQVHAHFLLSPYAN 142
P +AL +L GF PD + F +LI K C V+ GK H + +
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCC------VDSGKMCHGQAI--KHGC 149
Query: 143 DDV--VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
D V V+++L+ MY G D + +F I + +SW ++I+G R+G A +LF E
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
P KN+ +W +IS + + N + F +M + G + L ++ AC A +
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQ-GNESTLVLLLNACGRSARLKE 268
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
G+ VH +I S V I AL+DMY KC ++ A+ IF +S ++ V+W +I+
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
HG+ E L L++ M++ ++P+EVTFVG++ C+ GLVS+G++ + MV+++ IKP+
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
H C+ +L+S +G +EAE ++ +P V+P+ WA LLS+ + GN + IA L
Sbjct: 389 HQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSL 448
Query: 438 LCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAG 497
+ P + Y LL N+Y+ WE+V++VR+++ +++ + PG +DL + H G
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 173/438 (39%), Gaps = 113/438 (25%)
Query: 7 AYALKSQLSSVARQSPFLTKKL-HAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
+Y S +S + + + K+ H Q IK G Q P N+L+ Y CG L A +LF
Sbjct: 118 SYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV 177
Query: 66 TLPHRDLVSWASV-------------------------------LSACNLANLPHRALSI 94
+P RD+VSW S+ +SA AN P ++S+
Sbjct: 178 EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISL 237
Query: 95 SRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMY 154
R ++ GFQ + L+ AC L +G+ VHA + + + V+ + L+DMY
Sbjct: 238 FREMVRAGFQGNESTLVLLLNACGRSARL--KEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 155 AKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALIS 214
K R +FDS+S N ++W MI + GR L LF A+I+
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE-----------AMIN 344
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI----- 269
G+++ D + V+ CA + G+ + L++
Sbjct: 345 GMLR---------------------PDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 270 --GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
G++ C + ++Y+ F E +AEEA
Sbjct: 384 KPNFGHQWC------MANLYSSAG--------FPE--------------------EAEEA 409
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
L ++ V P + L+ + G + G ++ +S++E + + ++Y L++
Sbjct: 410 L---KNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPL--NYKYYHLLMN 464
Query: 388 LFSRSGHLDEAENLIRTM 405
++S +G ++ N +R M
Sbjct: 465 IYSVTGRWEDV-NRVREM 481
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 30/275 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ +HA +I++ L+ L+D YGKC + A ++FD+L R+ V+W ++ A L
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA----HFLLSPYA 141
P L + ++++ +PD F ++ CA G V+QG+ ++ F + P
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAG--LVSQGQSYYSLMVDEFQIKPNF 387
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVF----DSISSLNSISWTAMISGYARSGR----RSE 193
+ + ++Y+ G P+ D + S W ++S +G S
Sbjct: 388 GH---QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI 444
Query: 194 ALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
A L P + + L+ + V R E + +V +G
Sbjct: 445 AKSLIETDPLN--YKYYHLLMNIYS-----------VTGRWEDVNRVREMVKERKIGRIP 491
Query: 254 NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA 288
+ +L + VHGL +G VF +L Y+
Sbjct: 492 GCGLVDLKEIVHGLRLGCKEAEKVFTETSLEKCYS 526
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 214/411 (52%), Gaps = 36/411 (8%)
Query: 75 WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH 134
W +++ + P A+ + ++ PD + +IKA + + GK++H+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTL--GKELHSV 142
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
+ + D+ +S + +Y K +G A
Sbjct: 143 AVRLGFVGDEFCESGFITLYCK-------------------------------AGEFENA 171
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
++F E+P + L +W A+I GL +G +A FV M++ G+ D + SV +C
Sbjct: 172 RKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE-PDDFTMVSVTASCGG 230
Query: 255 LAVWELGKQVHGLVIGLGYE--SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
L L Q+H V+ E S + + N+L+DMY KC + A +IF EM +++VVSW+
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
S+IVG A +G EAL + M V+PN++TFVG++ AC + GLV +G+ F M +
Sbjct: 291 SMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSE 350
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
+ ++P L HY C++DL SR G L EA+ ++ MP+ P+ W L+ C+ G+ +MA
Sbjct: 351 FELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
Query: 433 IADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS 483
+A ++ L+P + Y++L+NVYA MW++V +VRKLM K+V K P YS
Sbjct: 411 VAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 50/314 (15%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K+LH+ ++ G E + + Y K G ++A ++FD P R L SW +++ N
Sbjct: 135 LGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLN 194
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL--SPYA 141
A + A+ + + G +PD F ++ +C +G L + Q+H L +
Sbjct: 195 HAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSL--AFQLHKCVLQAKTEEK 252
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
+D ++ ++L+DMY K G D +F+ + N +SW++MI GYA +G EAL FR+
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ- 311
Query: 202 PYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELG 261
MR+ G+ + + V+ AC + + E G
Sbjct: 312 ------------------------------MREFGVR-PNKITFVGVLSACVHGGLVEEG 340
Query: 262 KQVHGLVI-------GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK-DVVSWTS 313
K ++ GL + C+ VD+ ++ L AK + EM K +V+ W
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCI------VDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 314 IIVGTAQHGQAEEA 327
++ G + G E A
Sbjct: 395 LMGGCEKFGDVEMA 408
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 10/289 (3%)
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
Y F W ++ ++ + +DA ++ M + + + D L V+ A + + LGK
Sbjct: 79 YPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTV-LPDRYSLPIVIKAAVQIHDFTLGK 137
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
++H + + LG+ F + + +Y K + A+ +F E + + SW +II G G
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE-DYGIKPSLQH 381
+A EA+ ++ DM + ++P++ T V + +C +G +S L + +++ K +
Sbjct: 198 RANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL--LC 439
L+D++ + G +D A ++ M + +W++++ +GNT A+ ++
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPG---YSCI 485
++P + +LS G + E K MM E + EPG Y CI
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEE--GKTYFAMMKSEFELEPGLSHYGCI 363
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 200/366 (54%), Gaps = 33/366 (9%)
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
+CANL E K+VH + + ++N ++ M+ +CS + AK +F M KD+ S
Sbjct: 245 SCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDS 304
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
W ++ + +G ++AL L+++M +KPNE TF+ + AC+ VG + + F SM
Sbjct: 305 WHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMK 364
Query: 371 EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
++GI P +HY +L + + GHL EAE IR +P P W A+ + + HG+ +
Sbjct: 365 NEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLE 424
Query: 431 VRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKE 490
+ + ++ + DPS ++ ++ + V + E +
Sbjct: 425 DYMEELMVDV---DPSKAVINKIPTPPPKSFKETNMVTSKSRILEFR------------- 468
Query: 491 SHVFYAGETSHPMKDEILGLMRKLDAEMRKRG--YVPDTSYVLHDMDQQEKERQLFWHSE 548
+ FY KDE +++ A K+G YVPDT +VLHD+DQ+ KE+ L +HSE
Sbjct: 469 NLTFY--------KDEA----KEMAA---KKGVVYVPDTRFVLHDIDQEAKEQALLYHSE 513
Query: 549 RLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKC 608
RLA+AYG++ P + I+KNLRVCGDCH +K++S I R + VRD KR+HHFKDGKC
Sbjct: 514 RLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKC 573
Query: 609 SCNDFW 614
SC D+W
Sbjct: 574 SCGDYW 579
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 98 LLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKF 157
LL +G PD F L ++CAN+ L K+VH HFL S + D + + ++ M+ +
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSL--EHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 158 GLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE------SPYKNLFAWTA 211
+ VFD + + SW M+ Y+ +G +AL LF E P + F
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 212 LISGLVQSGNGVDAFYTFVKMRQE-GITIADPLVLS--SVVGACANLAVWE 259
L V G +AF F M+ E GI+ L V+G C +L E
Sbjct: 345 LACATV--GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 25 TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
+KK+H ++S N ++ +G+C + DA ++FD + +D+ SW ++ A +
Sbjct: 255 SKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSD 314
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
+ AL + + G +P+ F T+ ACA +G
Sbjct: 315 NGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVG 351
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 248/477 (51%), Gaps = 31/477 (6%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-- 81
L K LH++ IK G+ ++L+ YGKCG + A ++FD +P R++ +W +++
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 82 ----CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP-LHVNQGKQVHAHFL 136
LA+ +S+ R+ + T I+ G + + + +++ F
Sbjct: 124 SNGDAVLASGLFEEISVCRNTV------------TWIEMIKGYGKRIEIEKAREL---FE 168
Query: 137 LSPYANDDVVK-STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEAL 195
P+ +V S ++ +Y + R F+ I N+ W+ M+SGY R G EA
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 196 RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
+F ++L W LI+G Q+G DA F M+ EG D + +SS++ ACA
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYE-PDAVTVSSILSACAQS 287
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSII 315
++G++VH L+ G E F+SNAL+DMYAKC DL A +F +S + V S+I
Sbjct: 288 GRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMI 347
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
A HG+ +EAL ++ M S +KP+E+TF+ ++ AC + G + +G +F M + +
Sbjct: 348 SCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDV 406
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
KP+++H+ CL+ L RSG L EA L++ M V P++ ALL ACK H +T+MA ++
Sbjct: 407 KPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM- 465
Query: 436 KLLCLKPEDPSSY-----ILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDL 487
K++ +SY +SN+YA W+ +R M + ++K PG S + L
Sbjct: 466 KIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 176/368 (47%), Gaps = 14/368 (3%)
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
+++ACA + P V GK +H+ + +D +V S+L+ MY K G R VFD +
Sbjct: 51 ILRACACVVP-RVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE 109
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRE-SPYKNLFAWTALISGLVQSGNGVDAFYTFVK 231
N +W AMI GY +G A LF E S +N W +I G + A F +
Sbjct: 110 RNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFER 169
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
M E + + S ++G N E ++ + E F+ + ++ Y +
Sbjct: 170 MPFE---LKNVKAWSVMLGVYVNNRKMEDARKFFEDI----PEKNAFVWSLMMSGYFRIG 222
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
D+ A+ IF + +D+V W ++I G AQ+G +++A+ + +M +P+ VT ++
Sbjct: 223 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 352 ACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDE 411
AC+ G + GR + S++ GI+ + L+D++++ G L+ A ++ ++ V
Sbjct: 283 ACAQSGRLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR-SV 340
Query: 412 PTWAALLSACKHHGNTQMAVRIADKL--LCLKPEDPSSYILLSNVYAGASMWENVSKVRK 469
+++S HG + A+ + + L LKP++ + +L+ G + E + K+
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGL-KIFS 399
Query: 470 LMMVKEVK 477
M ++VK
Sbjct: 400 EMKTQDVK 407
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 207 FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD--PLVLSSVVGACANLAVWELGKQV 264
F + LI + G+ + A + +R+ G+ PL+L + AC V LGK +
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRAC--ACVVPRV-VLGKLL 68
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H I G S V + ++L+ MY KC +V+A+ +F EM ++V +W ++I G +G A
Sbjct: 69 HSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDA 128
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
A L++++ R N VT++ +I + K R LF M + +K +++ ++
Sbjct: 129 VLASGLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERM--PFELK-NVKAWSV 182
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
+L ++ + +++A +P + W+ ++S G+ A
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEA 227
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 7 AYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
A + S LS+ A+ + +++H+ I G+ ++ N L+D Y KCG L++A +F+
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPL 123
++ R + S++S + AL + ++ +PD F ++ AC + G L
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFL 391
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 227/443 (51%), Gaps = 37/443 (8%)
Query: 45 NTLLDAYGKCG-LLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG- 102
+ L+ AY K L +L +F +P+R++ SW ++ + + +++ + + +
Sbjct: 70 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESC 129
Query: 103 FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
+PD F +++AC+ G +H L +++ V S LV MY G +
Sbjct: 130 VRPDDFTLPLILRACS--ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 163 GRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNG 222
R +FD + +S+ +TAM GY + G L +FRE Y SG
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGY---------------SGFA 232
Query: 223 VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNA 282
+D+ +V+ S++ AC L + GK VHG I + + NA
Sbjct: 233 LDS-----------------VVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNA 275
Query: 283 LVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPN 342
+ DMY KCS L A +F MSR+DV+SW+S+I+G G + L+D+M+ ++PN
Sbjct: 276 ITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN 335
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
VTF+G++ AC++ GLV K FR M ++Y I P L+HY + D SR+G L+EAE +
Sbjct: 336 AVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFL 394
Query: 403 RTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWE 462
MPV PDE A+LS CK +GN ++ R+A +L+ LKP S Y+ L+ +Y+ A ++
Sbjct: 395 EDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFD 454
Query: 463 NVSKVRKLMMVKEVKKEPGYSCI 485
+R+ M K++ K PG S I
Sbjct: 455 EAESLRQWMKEKQISKVPGCSSI 477
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 237/444 (53%), Gaps = 31/444 (6%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
NTL+ YG+ G ++ A LFD +P +L H + F
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIP--------------DLCGDDHGGE------FRERFC 278
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK-STLVDMYAKFGLPDYG 163
+ ++++IKA ++ G V A L + D + +T++D Y +
Sbjct: 279 KNVVSWNSMIKA-------YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
A+F + + ++ SW M+SGYA G A F ++P K+ +W ++I+ ++ +
Sbjct: 332 FALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
+A F++M EG DP L+S++ A L LG Q+H +V+ V + NAL
Sbjct: 392 EAVDLFIRMNIEG-EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNAL 449
Query: 284 VDMYAKCSDLVAAKYIFCEMS-RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPN 342
+ MY++C +++ ++ IF EM +++V++W ++I G A HG A EAL L+ M S + P+
Sbjct: 450 ITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPS 509
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI 402
+TFV ++ AC++ GLV + +A F SM+ Y I+P ++HY+ L+++ S G +EA +I
Sbjct: 510 HITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYII 569
Query: 403 RTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWE 462
+MP PD+ W ALL AC+ + N +A A+ + L+PE + Y+LL N+YA +W+
Sbjct: 570 TSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWD 629
Query: 463 NVSKVRKLMMVKEVKKEPGYSCID 486
S+VR M K +KKE G S +D
Sbjct: 630 EASQVRMNMESKRIKKERGSSWVD 653
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 180/437 (41%), Gaps = 97/437 (22%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L+ + G + +A +F+ L R+ V+W +++S + R ++ +R L +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGY----VKRREMNQARKLFDVMPK 99
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D ++T+I + G + FL + R
Sbjct: 100 RDVVTWNTMISGYVSCGGIR----------FL------------------------EEAR 125
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
+FD + S +S SW MISGYA++ R EAL LF + P +N +W+A+I+G Q+G
Sbjct: 126 KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDS 185
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK-------------QVHGLVIGL 271
A F KM + + LV + + A W LG+ + L++G
Sbjct: 186 AVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGY 245
Query: 272 GYES------CVFIS------------------------NALVDMYAKCSDLVAAKYIFC 301
G C+F N+++ Y K D+V+A+ +F
Sbjct: 246 GQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFD 305
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV--TFVGLIYACSNVGLV 359
+M +D +SW ++I G + E+A AL+ +M PN ++ ++ ++VG V
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNRDAHSWNMMVSGYASVGNV 359
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS---PDEPTWAA 416
R F E + + + ++ + ++ EA +L M + PD T +
Sbjct: 360 ELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 417 LLSACKHHGNTQMAVRI 433
LLSA N ++ +++
Sbjct: 415 LLSASTGLVNLRLGMQM 431
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP-HRDLVSWASVLSAC 82
L ++H ++K+ + P N L+ Y +CG + ++ ++FD + R++++W +++
Sbjct: 427 LGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGY 485
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
AL++ S+ G P H F +++ ACA+ G
Sbjct: 486 AFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 241/498 (48%), Gaps = 54/498 (10%)
Query: 5 RHAYALKSQLSSVARQSPFLT--------KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGL 56
R L LS++ P L K +H + G S +LD Y K
Sbjct: 196 RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC 255
Query: 57 LQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFST---- 112
+ A ++FD ++ V+W++++ + + + + + Q D+ T
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGG----YVENEMIKEAGEVFFQMLVNDNVAMVTPVAI 311
Query: 113 --LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI 170
++ CA G L + G+ VH + + + + D V++T++ YAK+
Sbjct: 312 GLILMGCARFGDL--SGGRCVHCYAVKAGFILDLTVQNTIISFYAKY------------- 356
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
G +A R F E K++ ++ +LI+G V + ++F F
Sbjct: 357 ------------------GSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFH 398
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
+MR GI D L V+ AC++LA G HG + GY I NAL+DMY KC
Sbjct: 399 EMRTSGIR-PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLI 350
L AK +F M ++D+VSW +++ G HG +EAL+L++ M V P+EVT + ++
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAIL 517
Query: 351 YACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
ACS+ GLV +G+ LF SM D+ + P + HY C+ DL +R+G+LDEA + + MP P
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 410 DEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRK 469
D LLSAC + N ++ ++ K+ L E S +LLSN Y+ A WE+ +++R
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRM 636
Query: 470 LMMVKEVKKEPGYSCIDL 487
+ + + K PGYS +D+
Sbjct: 637 IQKKRGLLKTPGYSWVDV 654
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 195/451 (43%), Gaps = 79/451 (17%)
Query: 15 SSVARQSPFLTKKLHAQIIKSGLS-QHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDL- 72
+ + ++ L + +H ++K L+ L Y C ++ A +FD +PH +
Sbjct: 8 TCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRIN 67
Query: 73 -VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQV 131
++W ++ A + +AL + +L+ G +P + + ++KACA G ++ GK +
Sbjct: 68 PIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACA--GLRAIDDGKLI 125
Query: 132 HAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRR 191
H+H S +A D V + LVD YA + G
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYA-------------------------------KCGEL 154
Query: 192 SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQ-EGITIADPLVLSSVVG 250
A+++F E P +++ AW A+ISG D F+ MR+ +G++ LS++VG
Sbjct: 155 EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN----LSTIVG 210
Query: 251 ---ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD 307
A GK VHG +G+ + + + ++D+YAK ++ A+ +F +K+
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDM-VSARVKPNEVTFVGLI-YACSNVGLVSKGR-- 363
V+W+++I G ++ +EA ++ M V+ V +GLI C+ G +S GR
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 364 ---ALFRSMVEDYGIKPSL----QHYTCLLDLFSRSGHL--------------------- 395
A+ + D ++ ++ Y L D F + +
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 396 DEAENL---IRTMPVSPDEPTWAALLSACKH 423
+E+ L +RT + PD T +L+AC H
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 236/469 (50%), Gaps = 42/469 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC--- 82
K++HAQII GLS H +P + L L AL + +P+ + + +++S+
Sbjct: 26 KQIHAQIITIGLSHH-TYPLSKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 83 NLANLPHRALSISRSLLHQG---FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL--L 137
+ + H A S+ +L +P+ F + +L KA H G+ +HAH L L
Sbjct: 85 HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH-RHGRALHAHVLKFL 143
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
P +D V++ LV YA G R++F+ I + +W +++ YA S
Sbjct: 144 EPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEE------- 196
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
+ S V + +++R + L L +++ +CANL
Sbjct: 197 -------------------IDSDEEVLLLFMRMQVR------PNELSLVALIKSCANLGE 231
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
+ G H V+ F+ +L+D+Y+KC L A+ +F EMS++DV + ++I G
Sbjct: 232 FVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRG 291
Query: 318 TAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
A HG +E + LY ++S + P+ TFV I ACS+ GLV +G +F SM YGI+P
Sbjct: 292 LAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEP 351
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
++HY CL+DL RSG L+EAE I+ MPV P+ W + L + + HG+ + L
Sbjct: 352 KVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHL 411
Query: 438 LCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
L L+ E+ +Y+LLSN+YAG + W +V K R+LM V K PG S ++
Sbjct: 412 LGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 203/379 (53%), Gaps = 3/379 (0%)
Query: 106 DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRA 165
D VFS +K+CA G VHAH + S + ++ V L+DMY K + R
Sbjct: 47 DAHVFSLALKSCA--AAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARK 104
Query: 166 VFDSISSLNSISWTAMISGYARSGRRSEALRLFRE-SPYKNLFAWTALISGLVQSGNGVD 224
+FD I N++ W AMIS Y G+ EA+ L+ N ++ A+I GLV + +G
Sbjct: 105 LFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY 164
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
F + E + + L ++V AC+ + + L K++H E + + LV
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLV 224
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
+ Y +C +V + +F M +DVV+W+S+I A HG AE AL + +M A+V P+++
Sbjct: 225 EAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
F+ ++ ACS+ GL + F+ M DYG++ S HY+CL+D+ SR G +EA +I+
Sbjct: 285 AFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQA 344
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENV 464
MP P TW ALL AC+++G ++A A +LL ++PE+P++Y+LL +Y E
Sbjct: 345 MPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEA 404
Query: 465 SKVRKLMMVKEVKKEPGYS 483
++R M VK PG S
Sbjct: 405 ERLRLKMKESGVKVSPGSS 423
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 1 MSLSRHAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDA 60
+ L H ++L + S A P L +HA +KS + LLD YGKC + A
Sbjct: 44 LPLDAHVFSLALK-SCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHA 102
Query: 61 LQLFDTLPHRDLVSWASVLS----------ACNLAN----LP------------------ 88
+LFD +P R+ V W +++S A L +P
Sbjct: 103 RKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDG 162
Query: 89 -HRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+RA+ R ++ F+P+ L+ AC+ +G + K++H++ + +K
Sbjct: 163 SYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI--KEIHSYAFRNLIEPHPQLK 220
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL- 206
S LV+ Y + G Y + VFDS+ + ++W+++IS YA G AL+ F+E +
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 207 ---FAWTALISGLVQSGNGVDAFYTFVKMR 233
A+ ++ +G +A F +M+
Sbjct: 281 PDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 45/278 (16%)
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
L + T +S GN A F++M D V S + +CA LG VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+ + S F+ AL+DMY KC + A+ +F E+ +++ V W ++I G+ +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 326 EALALYD---------------------------------DMVSARVKPNEVTFVGLIYA 352
EA+ LY+ M+ R KPN +T + L+ A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 353 CSNVGLVSKGRAL----FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS 408
CS +G + + FR+++E P Q + L++ + R G + + + +M
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIE-----PHPQLKSGLVEAYGRCGSIVYVQLVFDSME-D 245
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCLK--PED 444
D W++L+SA HG+ + A++ ++ K P+D
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 198/339 (58%), Gaps = 7/339 (2%)
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
++++ Y SG A ++F E P +N+ +WTA+ISG Q + KMR+ +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRK---S 215
Query: 239 IADP--LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAA 296
+DP ++++ AC G+ VH + +G +S + ISN+L+ MY KC DL A
Sbjct: 216 TSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDA 275
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSN 355
IF + S KDVVSW S+I G AQHG A +A+ L++ M+ + KP+ +T++G++ +C +
Sbjct: 276 FRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 356 VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWA 415
GLV +GR F M E +G+KP L HY+CL+DL R G L EA LI MP+ P+ W
Sbjct: 336 AGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 416 ALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
+LL +C+ HG+ +R A++ L L+P+ ++++ L+N+YA W+ + VRKLM K
Sbjct: 395 SLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKG 454
Query: 476 VKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKL 514
+K PG S I++ +F A + S+ EI+ ++ L
Sbjct: 455 LKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCL 493
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 165/391 (42%), Gaps = 71/391 (18%)
Query: 7 AYALKSQLSSVARQSPFLTKK-LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
AY L S + S F T H +K G ++L+ Y G +++A ++F+
Sbjct: 120 AYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFE 179
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV 125
+P R++VSW +++S L + + P+ + F+ L+ AC G L
Sbjct: 180 EMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL-- 237
Query: 126 NQGKQVHA---HFLLSPYANDDVVKSTLVDMYAKFG-LPDYGRAVFDSISSLNSISWTAM 181
QG+ VH H L Y + + ++L+ MY K G L D R +FD S+ + +SW +M
Sbjct: 238 GQGRSVHCQTLHMGLKSYLH---ISNSLISMYCKCGDLKDAFR-IFDQFSNKDVVSWNSM 293
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
I+GYA+ G +A+ LF + M + G T D
Sbjct: 294 IAGYAQHGLAMQAIELFE------------------------------LMMPKSG-TKPD 322
Query: 242 PLVLSSVVGACANLAVWELGKQV------HGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
+ V+ +C + + + G++ HGL L + SC LVD+ + L
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSC------LVDLLGRFGLLQE 376
Query: 296 AKYIFCEMSRK-DVVSWTSIIVGTAQHGQ-------AEEALALYDDMVSARVKPNEVTFV 347
A + M K + V W S++ HG AEE L L D + V+ +
Sbjct: 377 ALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQ------L 430
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
+YA +VG K A R +++D G+K +
Sbjct: 431 ANLYA--SVGYW-KEAATVRKLMKDKGLKTN 458
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 143/312 (45%), Gaps = 21/312 (6%)
Query: 184 GYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA--- 240
G+ + R++++ R FR F L ++ NGV + V + ++
Sbjct: 64 GFVQEFRQTDSWR-FRGQAISEDF-------DLSRTKNGVSSVLEEVMLEDSSSSVKRDG 115
Query: 241 ---DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAK 297
D LSS V +C + G H L + G+ S V++ ++LV +Y ++ A
Sbjct: 116 WSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAY 175
Query: 298 YIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVG 357
+F EM ++VVSWT++I G AQ + + L LY M + PN+ TF L+ AC+ G
Sbjct: 176 KVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSG 235
Query: 358 LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAAL 417
+ +GR++ + G+K L L+ ++ + G L +A + + D +W ++
Sbjct: 236 ALGQGRSVHCQTLH-MGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSM 293
Query: 418 LSACKHHGNTQMAVRIADKLL---CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVK 474
++ HG A+ + + ++ KP D +Y+ + + A + + K LM
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKP-DAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 475 EVKKEPG-YSCI 485
+K E YSC+
Sbjct: 353 GLKPELNHYSCL 364
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 230/482 (47%), Gaps = 39/482 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRD-LVSWASVLSACNL 84
KK+H K G + L+ +Y K ++DA ++FD LP RD V W ++++ +
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQ 239
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
AL + + +G ++++ A G ++ G+ +H + + +D
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD--IDNGRSIHGLAVKTGSGSDI 297
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
VV + L+DMY K S EA +F +
Sbjct: 298 VVSNALIDMYGK-------------------------------SKWLEEANSIFEAMDER 326
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
+LF W +++ G+ F +M GI D + L++V+ C LA G+++
Sbjct: 327 DLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR-PDIVTLTTVLPTCGRLASLRQGREI 385
Query: 265 HGLVIGLGY----ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
HG +I G S FI N+L+DMY KC DL A+ +F M KD SW +I G
Sbjct: 386 HGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGV 445
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
E AL ++ M A VKP+E+TFVGL+ ACS+ G +++GR M Y I P+
Sbjct: 446 QSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSD 505
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
HY C++D+ R+ L+EA L + P+ + W ++LS+C+ HGN +A+ +L L
Sbjct: 506 HYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHEL 565
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETS 500
+PE Y+L+SNVY A +E V VR M + VKK PG S I L H F+ G +
Sbjct: 566 EPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQT 625
Query: 501 HP 502
HP
Sbjct: 626 HP 627
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 201/454 (44%), Gaps = 76/454 (16%)
Query: 12 SQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPH 69
+ L A++ +++ +++H +++ G P T L++ Y KCGL++ A+ +F
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 70 RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGK 129
RD+ + +++S + P A+ R + G PD + F +L+K M ++ K
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM---ELSDVK 180
Query: 130 QVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL-NSISWTAMISGYARS 188
+VH + +D V S LV Y+KF + + VFD + +S+ W A+++GY+
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS-- 238
Query: 189 GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSV 248
++FR DA F KMR+EG+ ++ ++SV
Sbjct: 239 -------QIFRFE----------------------DALLVFSKMREEGVGVSRH-TITSV 268
Query: 249 VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV 308
+ A + G+ +HGL + G S + +SNAL+DMY K L A IF M +D+
Sbjct: 269 LSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDL 328
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
+W S++ G + LAL++ M+ + ++P+ VT ++ C + + +GR +
Sbjct: 329 FTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGY 388
Query: 369 MVEDYGIKPSLQH---YTCLLDLFSRSGHLDEAENLIRTM-------------------- 405
M+ + + + L+D++ + G L +A + +M
Sbjct: 389 MIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSC 448
Query: 406 --------------PVSPDEPTWAALLSACKHHG 425
V PDE T+ LL AC H G
Sbjct: 449 GELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 142/268 (52%), Gaps = 8/268 (2%)
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
T++++ YA+ G A+ +F S +++F + ALISG V +G+ +DA T+ +MR GI
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGI- 157
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+ D S++ + + ++ K+VHGL LG++S ++ + LV Y+K + A+
Sbjct: 158 LPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQK 216
Query: 299 IFCEM-SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVG 357
+F E+ R D V W +++ G +Q + E+AL ++ M V + T ++ A + G
Sbjct: 217 VFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSG 276
Query: 358 LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAAL 417
+ GR++ V+ G + L+D++ +S L+EA ++ M D TW ++
Sbjct: 277 DIDNGRSIHGLAVKT-GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSV 334
Query: 418 LSACKHHGNTQMAVRIADKLLC--LKPE 443
L + G+ + + +++LC ++P+
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPD 362
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 241/519 (46%), Gaps = 68/519 (13%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+ +H KSGL N L+ Y KC L A LF + + VSW +++ A + +
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH--------VNQ---------- 127
L A+++ +++ + + L+ A + PLH VN
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCA 290
Query: 128 ----GKQVHAHFLLSPYANDDVVK-STLVDMYAKFGLPDYGRAVFDSISSL--------- 173
G V A L + D +V +++V YA+ G D F L
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 174 ------------------------------NSISWTAMISGYARSGRRSEALRLFRESPY 203
++ +I+ Y++ L LF +
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
L +W ++ISG VQSG AF F +M G + D + ++S++ C+ L LGK+
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+HG + +E+ F+ AL+DMYAKC + V A+ +F + +W S+I G + G
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
AL+ Y +M +KP+E+TF+G++ AC++ G V +G+ FR+M++++GI P+LQHY
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
++ L R+ EA LI M + PD W ALLSAC H ++ +A K+ L +
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGY 482
+ Y+L+SN+YA +MW++V +VR +M K+ GY
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMM------KDNGY 683
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 194/470 (41%), Gaps = 70/470 (14%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++ + KSGL + +LL+ Y K G + A LFD +P RD V W +++ +
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A + +L QGF P L+ C G V+QG+ VH S D
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCG--FVSQGRSVHGVAAKSGLELDSQ 187
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
VK+ L+ Y+K +F + +++SW MI Y++SG + EA+ +F KN
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVF-----KN 242
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+F IS + T + + ++ +PL H
Sbjct: 243 MFEKNVEISPV-----------TIINLLSAHVS-HEPL---------------------H 269
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
LV+ G + + + +LV Y++C LV+A+ ++ + +V TSI+ A+ G +
Sbjct: 270 CLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMD 329
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
A+ + +K + V VG+++ C + G +L Y IK L T +
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL-----HGYAIKSGLCTKTLV 384
Query: 386 LD-LFSRSGHLDEAENLIRTMPVSPDEP--TWAALLSACKHHGNTQMAVRIADKLLCLKP 442
++ L + D+ E ++ + P +W +++S C G A + +++
Sbjct: 385 VNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGG 444
Query: 443 EDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESH 492
P + I ++++ AG S C++LGKE H
Sbjct: 445 LLPDA-ITIASLLAGCSQ---------------------LCCLNLGKELH 472
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 143/333 (42%), Gaps = 39/333 (11%)
Query: 69 HRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
+RDL + S+L +C + ++I R LL P+HF S ++A Q
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 129 KQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS 188
+QV H S VK++L+++Y K
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLK-------------------------------K 98
Query: 189 GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSV 248
G + A LF E P ++ W ALI G ++G DA+ F+ M Q+G + L ++
Sbjct: 99 GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS-PSATTLVNL 157
Query: 249 VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV 308
+ C G+ VHG+ G E + NAL+ Y+KC++L +A+ +F EM K
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST 217
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
VSW ++I +Q G EEA+ ++ +M V+ + VT + L+ A
Sbjct: 218 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-------HVSHEPLHC 270
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL 401
+V G+ + T L+ +SR G L AE L
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K+LH +++ L+D Y KCG A +F ++ +W S++S +
Sbjct: 467 LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYS 526
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGK 129
L+ L HRALS + +G +PD F ++ AC + G V++GK
Sbjct: 527 LSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG--FVDEGK 570
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 216/419 (51%), Gaps = 20/419 (4%)
Query: 13 QLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDL 72
QL S RQ +H +IK+G N L+D Y KCG L+D+ FD + +++
Sbjct: 330 QLLSCGRQ-------IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
V W ++LS + P LS+ +L GF+P + FST +K+C V + +Q+H
Sbjct: 383 VCWNALLSGYANKDGP-ICLSLFLQMLQMGFRPTEYTFSTALKSCC------VTELQQLH 435
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG-YARSGRR 191
+ + Y ++D V S+L+ YAK L + + D S S+ +++G Y+R G+
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQY 495
Query: 192 SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA 251
E+++L + +W I+ +S + F M Q I D S++
Sbjct: 496 HESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR-PDKYTFVSILSL 554
Query: 252 CANLAVWELGKQVHGLVIGLGYESC--VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV 309
C+ L LG +HGL+ + SC F+ N L+DMY KC + + +F E K+++
Sbjct: 555 CSKLCDLTLGSSIHGLITKTDF-SCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLI 613
Query: 310 SWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
+WT++I HG +EAL + + +S KP+ V+F+ ++ AC + G+V +G LF+ M
Sbjct: 614 TWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM 673
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
+DYG++P + HY C +DL +R+G+L EAE+LIR MP D P W L C Q
Sbjct: 674 -KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQ 731
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 210/494 (42%), Gaps = 83/494 (16%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
++K+LH K GL N+L+ AYGKCG A ++F D+VSW +++ A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ P +AL + S+ GF P+ + +++ + + L G+Q+H + +
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC--GRQIHGMLIKNGCETG 350
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
V+ + L+D YAK G + R FD I N + W A++SGYA
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK--------------- 395
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+G F++M Q G + S+ + +C V EL +Q
Sbjct: 396 -----------------DGPICLSLFLQMLQMGFRPTE-YTFSTALKSC---CVTEL-QQ 433
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCS---------------------DLVAAKY---- 298
+H +++ +GYE ++ ++L+ YAK ++VA Y
Sbjct: 434 LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRG 493
Query: 299 -------IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
+ + + D VSW I ++ EE + L+ M+ + ++P++ TFV ++
Sbjct: 494 QYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILS 553
Query: 352 ACSNVGLVSKGRALFRSMVE-DYGIKPSLQHYTC--LLDLFSRSGHLDEAENLIRTMPVS 408
CS + ++ G ++ + + D+ + + C L+D++ + G + +
Sbjct: 554 LCSKLCDLTLGSSIHGLITKTDFSCADT---FVCNVLIDMYGKCGSIRSVMKVFEETR-E 609
Query: 409 PDEPTWAALLSACKHHGNTQMAVRIADKLLCL--KPEDPSSYILLSNVYAGASMWENVSK 466
+ TW AL+S HG Q A+ + L L KP+ S +L+ G + E +
Sbjct: 610 KNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGL 669
Query: 467 VRKLMMVKEVKKEP 480
+K+ K+ EP
Sbjct: 670 FQKM---KDYGVEP 680
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 182/423 (43%), Gaps = 64/423 (15%)
Query: 27 KLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+LH +K GL + F T LL YG+ LL+ A Q+F+ +P + L +W ++S
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ R L+ G F ++K + + L ++ KQ+H
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDIS--KQLHCS----------- 240
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
K GL IS +NS +IS Y + G A R+F+++ +
Sbjct: 241 --------ATKKGLDC-------EISVVNS-----LISAYGKCGNTHMAERMFQDAGSWD 280
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ +W A+I +S N + A FV M + G + + SV+G + + + G+Q+H
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFS-PNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
G++I G E+ + + NAL+D YAKC +L ++ F + K++V W +++ G A
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGP 398
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE--DYGIKPSLQHYT 383
L+L+ M+ +P E TF + +C L + R E DY + ++ Y
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 384 ---------CLLD----------------LFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
LLD ++SR G E+ LI T+ PD +W +
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAI 517
Query: 419 SAC 421
+AC
Sbjct: 518 AAC 520
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 187/415 (45%), Gaps = 49/415 (11%)
Query: 14 LSSVARQSPFL--TKKLHAQIIK--SGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH 69
L +V R++P TK LHA I S L Q N ++ Y K G + A ++FD +P
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 70 RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGK 129
R+ VS+ +++ + +A + + + G+ P+ S L+ +CA+ L V G
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCAS---LDVRAGT 133
Query: 130 QVHAHFL-LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARS 188
Q+H L + D V + L+ +Y + L + VF+ +
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM------------------ 175
Query: 189 GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSV 248
P+K+L W ++S L G + + F ++ + G ++ + L +
Sbjct: 176 -------------PFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL 222
Query: 249 VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV 308
G + + ++ KQ+H G + + + N+L+ Y KC + A+ +F + D+
Sbjct: 223 KGV-SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDI 281
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
VSW +II TA+ +AL L+ M PN+ T+V ++ S V L+S GR +
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAE---NLIRTMPVSPDEPTWAALLSA 420
++++ G + + L+D +++ G+L+++ + IR + W ALLS
Sbjct: 342 LIKN-GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI----VCWNALLSG 391
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESC------VFISNALVDMYAKCSDLVAAKYIF 300
S++ C + K +H L I L C V++ N ++ +Y K ++ A +F
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITL----CSVLLQPVYVCNNIISLYEKLGEVSLAGKVF 72
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
+M ++ VS+ +II G +++G ++A ++ +M PN+ T GL+ +C+++ V
Sbjct: 73 DQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLD-VR 130
Query: 361 KGRALFRSMVEDYGIKPSLQHY-TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
G L + YG+ + TCLL L+ R L+ AE + MP E TW ++S
Sbjct: 131 AGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE-TWNHMMS 188
Query: 420 ACKHHG 425
H G
Sbjct: 189 LLGHRG 194
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 202/379 (53%), Gaps = 44/379 (11%)
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
G+Q+HA + ++++LV Y+ G DY R VFD
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFD------------------- 124
Query: 188 SGRRSEALRLFRESPYK-NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
E+P K N+ WTA+IS ++ N V+A F +M E I + D ++++
Sbjct: 125 ------------ETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL-DGVIVT 171
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFIS--NALVDMYAKCSDLVAAKYIFCEMS 304
+ ACA+L ++G++++ I + ++ N+L++MY K + A+ +F E
Sbjct: 172 VALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESM 231
Query: 305 RKDVVSWTSIIVGTAQHGQAEEALALYDDMVS------ARVKPNEVTFVGLIYACSNVGL 358
RKDV ++TS+I G A +GQA+E+L L+ M + + PN+VTF+G++ ACS+ GL
Sbjct: 232 RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL 291
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
V +G+ F+SM+ DY +KP H+ C++DLF RSGHL +A I MP+ P+ W LL
Sbjct: 292 VEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLL 351
Query: 419 SACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKK 478
AC HGN ++ + ++ L + Y+ LSN+YA MW+ SK+R + ++
Sbjct: 352 GACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV---RKRR 408
Query: 479 EPGYSCIDLGKESHVFYAG 497
PG S I+LG + F +G
Sbjct: 409 MPGKSWIELGSIINEFVSG 427
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 159/360 (44%), Gaps = 41/360 (11%)
Query: 8 YALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL 67
+A+K +SS + S +++HA + K G + +L+ Y G + A Q+FD
Sbjct: 69 FAIK--VSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDET 126
Query: 68 PHR-DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
P + ++V W +++SA A+ + + + + + D + + + ACA++G V
Sbjct: 127 PEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA--VQ 184
Query: 127 QGKQVHAHFLLSP--YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISG 184
G+++++ + A D ++++L++MY K G + R +FD + ++T+MI G
Sbjct: 185 MGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFG 244
Query: 185 YARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
YA +G+ E+L LF++ + Q+ + + +
Sbjct: 245 YALNGQAQESLELFKKMKT--------------------------IDQSQDTVITPNDVT 278
Query: 245 LSSVVGACANLAVWELGKQ-VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
V+ AC++ + E GK+ +++ + +VD++ + L A +M
Sbjct: 279 FIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM 338
Query: 304 SRK-DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
K + V W +++ + HG E + V R+ + VG A SN+ SKG
Sbjct: 339 PIKPNTVIWRTLLGACSLHGNVE-----LGEEVQRRIFELDRDHVGDYVALSNI-YASKG 392
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPL-VLSSVVGACANLAVWELGKQVHGLVIGLGYES 275
++SG + A F ++ + D VL ++ + A A G+Q+H LV LG+ +
Sbjct: 39 LESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNA 98
Query: 276 CVFISNALVDMYAKCSDLVAAKYIFCEM-SRKDVVSWTSIIVGTAQHGQAEEALALYDDM 334
+ I +LV Y+ D+ A+ +F E ++++V WT++I ++ + EA+ L+ M
Sbjct: 99 VIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM 158
Query: 335 VSARVKPNEVTFVGLIYACSNVGLVSKGRALF-RSMVEDYGIKPSLQHYTCLLDLFSRSG 393
+ +++ + V + AC+++G V G ++ RS+ + L LL+++ +SG
Sbjct: 159 EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSG 218
Query: 394 HLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
++A L + D T+ +++ +G Q ++ + K+
Sbjct: 219 ETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKM 261
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 225/459 (49%), Gaps = 43/459 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H +++ G + + +D YGKC L A ++F +P R+ VSW
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW------------ 179
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+ L+ A G L ++ + F L P N
Sbjct: 180 -----------------------TALVVAYVKSGEL-----EEAKSMFDLMPERNLGSWN 211
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
+ LVD K G + +FD + + IS+T+MI GYA+ G A LF E+ ++
Sbjct: 212 A-LVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHG- 266
AW+ALI G Q+G +AF F +M + + D ++ ++ AC+ + +EL ++V
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVK-PDEFIMVGLMSACSQMGCFELCEKVDSY 329
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
L + S ++ AL+DM AKC + A +F EM ++D+VS+ S++ G A HG E
Sbjct: 330 LHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSE 389
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
A+ L++ MV + P+EV F ++ C LV +G F M + Y I S HY+C++
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIV 449
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
+L SR+G L EA LI++MP W +LL C HGNT++A +A L L+P+
Sbjct: 450 NLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAG 509
Query: 447 SYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
SY+LLSN+YA W +V+ +R M + K G S I
Sbjct: 510 SYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 219/477 (45%), Gaps = 60/477 (12%)
Query: 20 QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQ-LFDTLPHRDLVSWASV 78
+S ++HA+II+ GL Q + + + + +F+ +P W +
Sbjct: 21 KSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHL 80
Query: 79 LSACNLANLPHRALSISRSLLHQGF-QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
+ + L +SI ++ G +PD + F ++K C+N G + V G VH L
Sbjct: 81 IKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRV--GSSVHGLVLR 138
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
+ D VV ++ VD Y K R VF + N++SWTA++ Y +SG EA +
Sbjct: 139 IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSM 198
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
F P +NL +W AL+ GLV+SG+ V+A F +M + I
Sbjct: 199 FDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI-------------------- 238
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
+ Y S ++D YAK D+V+A+ +F E DV +W+++I+G
Sbjct: 239 -------------ISYTS-------MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILG 278
Query: 318 TAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVG---LVSKGRALFRSMVEDYG 374
AQ+GQ EA ++ +M + VKP+E VGL+ ACS +G L K + + +
Sbjct: 279 YAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS 338
Query: 375 IKPSLQHYT--CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
HY L+D+ ++ GH+D A L MP D ++ +++ HG A+R
Sbjct: 339 -----SHYVVPALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYCSMMEGMAIHGCGSEAIR 392
Query: 433 IADKLL--CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVK-EVKKEPG-YSCI 485
+ +K++ + P D ++ ++ V + + E + +LM K + P YSCI
Sbjct: 393 LFEKMVDEGIVP-DEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCI 448
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 132/311 (42%), Gaps = 51/311 (16%)
Query: 25 TKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
KKL ++ K + + +++D Y K G + A LF+ D+ +W++++
Sbjct: 226 AKKLFDEMPKRDIISY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQ 281
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
P+ A + + + +PD F+ L+ AC+ MG + + + H ++ +++
Sbjct: 282 NGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
VV + L+DM AK G D +F+ + + +S+ +M+ G A G SEA+RLF
Sbjct: 342 VVPA-LIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE----- 395
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN-------LAV 257
KM EGI + D + + ++ C L
Sbjct: 396 --------------------------KMVDEGI-VPDEVAFTVILKVCGQSRLVEEGLRY 428
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS-RKDVVSWTSIIV 316
+EL ++ + ++ + SC+ V++ ++ L A + M +W S++
Sbjct: 429 FELMRKKYSILASPDHYSCI------VNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLG 482
Query: 317 GTAQHGQAEEA 327
G + HG E A
Sbjct: 483 GCSLHGNTEIA 493
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 221/429 (51%), Gaps = 43/429 (10%)
Query: 47 LLDAYGKCGLLQDALQLFDTLPHRDL--VSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
L+ Y CG + A ++FD + RD +W S++S A+++ + G +
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK 192
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD F F ++KAC +G + + G+ +H + + D V + LV MYAK G R
Sbjct: 193 PDRFTFPRVLKACGGIGSVQI--GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
VFD I P+K+ +W ++++G + G +
Sbjct: 251 NVFDMI-------------------------------PHKDYVSWNSMLTGYLHHGLLHE 279
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
A F M Q GI D + +SSV+ A + ++ G+Q+HG VI G E + ++NAL+
Sbjct: 280 ALDIFRLMVQNGIE-PDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALI 335
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
+Y+K L A +IF +M +D VSW +II + H + L ++ M A KP+ +
Sbjct: 336 VLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGI 392
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI-R 403
TFV ++ C+N G+V G LF M ++YGI P ++HY C+++L+ R+G ++EA ++I +
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWEN 463
M + W ALL AC HGNT + A +L L+P++ ++ LL +Y+ A E+
Sbjct: 453 EMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAED 512
Query: 464 VSKVRKLMM 472
V +VR++M+
Sbjct: 513 VERVRQMMV 521
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 184/386 (47%), Gaps = 55/386 (14%)
Query: 109 VFSTLIKACANMGPLHVNQGKQVHAHFLLSPY--ANDDVVKSTLVDMYAKFGLPDYGRAV 166
+F++L++ C ++ ++ G V H L+ PY N+ + S LV +YA G + V
Sbjct: 94 IFASLLETCYSLRA--IDHG--VRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEV 149
Query: 167 FDSISSLNS--ISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
FD +S +S +W ++ISGYA G+ +A+ L
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL--------------------------- 182
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
+ +M ++G+ D V+ AC + ++G+ +H ++ G+ V++ NALV
Sbjct: 183 ----YFQMAEDGVK-PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALV 237
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEV 344
MYAKC D+V A+ +F + KD VSW S++ G HG EAL ++ MV ++P++V
Sbjct: 238 VMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKV 297
Query: 345 TFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRT 404
++ + V GR L ++ G++ L L+ L+S+ G L +A +
Sbjct: 298 AISSVL---ARVLSFKHGRQLHGWVIRR-GMEWELSVANALIVLYSKRGQLGQACFIFDQ 353
Query: 405 MPVSPDEPTWAALLSACKHHGNTQMAVRIADKL--LCLKPEDPSSYILLSNVYAGASMWE 462
M + D +W A++SA H ++ +++ KP D +++ + ++ A M E
Sbjct: 354 M-LERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKP-DGITFVSVLSLCANTGMVE 408
Query: 463 NVSKVRKLMMVKEVKKEPG---YSCI 485
+ ++ L M KE +P Y+C+
Sbjct: 409 DGERLFSL-MSKEYGIDPKMEHYACM 433
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
Q+GI++ +P + +S++ C +L + G +VH L+ + + IS+ LV +YA C
Sbjct: 84 QKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYA 143
Query: 294 VAAKYIFCEMSRKDV--VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
A +F MS++D +W S+I G A+ GQ E+A+ALY M VKP+ TF ++
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 352 ACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDE 411
AC +G V G A+ R +V++ G + L+ ++++ G + +A N+ +P D
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDY 261
Query: 412 PTWAALLSACKHHGNTQMAVRI 433
+W ++L+ HHG A+ I
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDI 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ + +H ++K G N L+ Y KCG + A +FD +PH+D VSW S+L+
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
L H AL I R ++ G +PD S+++ L G+Q+H + +
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLARV-----LSFKHGRQLHGWVIRRGMEWE 327
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
V + L+ +Y+K G +FD + +++SW A+IS ++++ S L+ F +
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQ 381
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++LH +I+ G+ N L+ Y K G L A +FD + RD VSW +++SA +
Sbjct: 313 RQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN 372
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ L + +PD F +++ CAN G V G+++ + + Y D
Sbjct: 373 S---NGLKYFEQMHRANAKPDGITFVSVLSLCANTG--MVEDGERLFS-LMSKEYGIDPK 426
Query: 146 VK--STLVDMYAKFGL 159
++ + +V++Y + G+
Sbjct: 427 MEHYACMVNLYGRAGM 442
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 229/498 (45%), Gaps = 60/498 (12%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRA------------- 91
N+++D YGKCGL A LF T HRDLVSW S++SA + H+A
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Query: 92 ----LSISRSLLHQGFQPDHFVF---------------------------------STLI 114
LS ++L D +F +++I
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVI 552
Query: 115 KACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRA----VFDSI 170
CA+ G H+ + A +D + + GL GR S+
Sbjct: 553 SGCASSGH-HLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSL 611
Query: 171 SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFV 230
L++ +I+ Y R A+++F NL +W +IS L Q+ G + F F
Sbjct: 612 RELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR 671
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
++ E + + ++ A L G Q H +I G+++ F+S ALVDMY+ C
Sbjct: 672 NLKLE----PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 291 SDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVGL 349
L +F + +W S+I HG E+A+ L+ ++ S + ++PN+ +F+ L
Sbjct: 728 GMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
+ ACS+ G + +G + ++ M E +G+KP +H ++D+ R+G L EA I +
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ 847
Query: 410 DEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRK 469
W ALLSAC +HG+T++ +A+ L ++P++ S YI L+N Y G WE ++RK
Sbjct: 848 KAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRK 907
Query: 470 LMMVKEVKKEPGYSCIDL 487
++ +KK PGYS ID+
Sbjct: 908 MVEDNALKKLPGYSVIDV 925
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 200/424 (47%), Gaps = 41/424 (9%)
Query: 10 LKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH 69
L+S + ++P + +H +K GL Q + LL YG+ G L + LFD L
Sbjct: 94 LRSFMMRTETETP---RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE 150
Query: 70 RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGK 129
+D++ W S+++A N A+ + ++H+G + D + L+ A A +
Sbjct: 151 KDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD--STTLLLAASALSSLHLSRKCS 208
Query: 130 QVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSG 189
+H + + D + + L+++YAK VF + + +SW +++ +G
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 190 RRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV 249
++L+ F+ +G+G QE AD + S V+
Sbjct: 269 HPRKSLQYFKS-----------------MTGSG-----------QE----ADTVTFSCVI 296
Query: 250 GACANLAVWELGKQVHGLVIGLGY--ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD 307
AC+++ LG+ +HGLVI GY E+ V + N+++ MY+KC D AA+ +F E+ +D
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDMVSA-RVKPNEVTFVGLIYACSNVGLVSKGRALF 366
V+S +I+ G A +G EEA + + M S +++P+ T V + C ++ +GRA+
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
V +L+ ++D++ + G +AE L +T D +W +++SA +G
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT-TTHRDLVSWNSMISAFSQNGF 475
Query: 427 TQMA 430
T A
Sbjct: 476 THKA 479
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 181/408 (44%), Gaps = 54/408 (13%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
LH I++GL N L++ Y K L A +F + HRD+VSW ++++ C
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD--V 145
P ++L +S+ G + D FS +I AC+++ L + G+ +H + S Y+ +
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL--GESLHGLVIKSGYSPEAHVS 327
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V ++++ MY+K G + VF+ + + IS A+++G+A +G EA
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAF---------- 377
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
G++ VD D + S+ C +L+ G+ VH
Sbjct: 378 ---------GILNQMQSVDKIQ------------PDIATVVSITSICGDLSFSREGRAVH 416
Query: 266 GLVIGLGYES-CVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
G + + +S + + N+++DMY KC A+ +F + +D+VSW S+I +Q+G
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
+A L+ ++VS Y+CS L + L D I H C
Sbjct: 477 HKAKNLFKEVVSE-------------YSCSKFSLSTVLAILTSCDSSDSLIFGKSVH--C 521
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
L + G L A + TM + D +W +++S C G+ ++R
Sbjct: 522 WLQ---KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLR 566
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
H IKS NTL+ YG+C ++ A+++F + +L SW V+SA +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+ R+L +P+ F L+ A +G + G Q H H + + + V
Sbjct: 663 GREVFQLFRNL---KLEPNEITFVGLLSASTQLGS--TSYGMQAHCHLIRRGFQANPFVS 717
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSIS-WTAMISGYARSGRRSEALRLFRE------ 200
+ LVDMY+ G+ + G VF + S +NSIS W ++IS + G +A+ LF+E
Sbjct: 718 AALVDMYSSCGMLETGMKVFRN-SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 201 -SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQE 235
P K+ F +L+S SG +D ++ K +E
Sbjct: 777 MEPNKSSF--ISLLSACSHSGF-IDEGLSYYKQMEE 809
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+ +++ Y R+G + LF E K++ W ++I+ L Q+G + A F++M +G
Sbjct: 126 SKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNE 185
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
D L A ++L + +H L I G + NAL+++YAK +L +A+
Sbjct: 186 F-DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAEC 244
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F M +D+VSW +I+ +G ++L + M + + + VTF +I ACS++
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 359 VSKGRALFRSMVED-YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAAL 417
++ G +L +++ Y + + ++ ++S+ G + AE + + V D + A+
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVISSNAI 363
Query: 418 LSACKHHGNTQMAVRIADKLLCLKPEDP 445
L+ +G + A I +++ + P
Sbjct: 364 LNGFAANGMFEEAFGILNQMQSVDKIQP 391
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 29 HAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
H +I+ G Q PF + L+D Y CG+L+ +++F + +W SV+SA +
Sbjct: 702 HCHLIRRGF-QANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGM 760
Query: 88 PHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLHVNQG----KQVHAHFLLSPYAN 142
+A+ + + L +P+ F +L+ AC++ G +++G KQ+ F + P
Sbjct: 761 GEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG--FIDEGLSYYKQMEEKFGVKPVTE 818
Query: 143 DDVVKSTLVDMYAKFG 158
V +VDM + G
Sbjct: 819 HRV---WIVDMLGRAG 831
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 206/399 (51%), Gaps = 6/399 (1%)
Query: 91 ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
+L++ +L QP++ F +LIKA + V+ G +H L + D V+++
Sbjct: 70 SLALFTHMLASHVQPNNLTFPSLIKAACS--SFSVSYGVALHGQALKRGFLWDPFVQTSF 127
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT 210
V Y + G + R +FD I + ++ +++ R+G A F+ P ++ +WT
Sbjct: 128 VRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWT 187
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADP--LVLSSVVGACANL--AVWELGKQVHG 266
+I+G + G A F +M Q + P SV+ +CAN LGKQ+HG
Sbjct: 188 TVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHG 247
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
V+ + AL+DMY K DL A IF ++ K V +W +II A +G+ ++
Sbjct: 248 YVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQ 307
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
AL +++ M S+ V PN +T + ++ AC+ LV G LF S+ +Y I P+ +HY C++
Sbjct: 308 ALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVV 367
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS 446
DL R+G L +A N I+++P PD ALL ACK H NT++ + +L+ L+P+
Sbjct: 368 DLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCG 427
Query: 447 SYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
Y+ LS A S W K+RK M+ ++K P YS +
Sbjct: 428 QYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-- 102
N+LLDA G+ G + A + F +P D+VSW +V++ + L +AL + ++
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 103 -FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
P+ F +++ +CAN + GKQ+H + + + + L+DMY K G +
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLE 275
Query: 162 YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
+FD I +W A+IS A +GR +AL +F
Sbjct: 276 MALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 194/378 (51%), Gaps = 14/378 (3%)
Query: 237 ITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAA 296
+ ++ L L+ + G L + K VHG + + ++ L++MY+ C A
Sbjct: 252 VDLSRLLRLAKICGEAEGL---QEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEA 308
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+F +MS K++ +W II A++G E+A+ ++ P+ F G+ YAC +
Sbjct: 309 ASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGML 368
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
G V +G F SM DYGI PS++ Y L+++++ G LDEA + MP+ P+ W
Sbjct: 369 GDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWET 428
Query: 417 LLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEV 476
L++ + HGN ++ A+ + L P + + AS E S ++ ++ V
Sbjct: 429 LMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILHGV 488
Query: 477 KKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHDMDQ 536
K F AG+T+ P DE+ L+R L M + GYV +T LHD+DQ
Sbjct: 489 KSS-----------MQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQ 537
Query: 537 QEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIYVRD 596
+ KE L HSER+A A +L + P ++KNLRVC DCH LK++S I RE+ RD
Sbjct: 538 ESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRD 597
Query: 597 AKRYHHFKDGKCSCNDFW 614
KR+H K+G C+C D+W
Sbjct: 598 IKRFHQMKNGACTCKDYW 615
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 238/470 (50%), Gaps = 40/470 (8%)
Query: 21 SPFLTKKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
S + + HA ++ Q +T L+D Y K A +FD + ++ VSW +++
Sbjct: 164 SSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI 223
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA--NMGPLHVNQGKQVHAHFLL 137
S C + + R++ + +P+ +++ AC N G V K++H
Sbjct: 224 SGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV---KEIHGFSFR 280
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRL 197
D+ + + + MY R G S + L
Sbjct: 281 HGCHADERLTAAFMTMYC-------------------------------RCGNVSLSRVL 309
Query: 198 FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
F S +++ W+++ISG ++G+ + +MR+EGI A+ + L ++V AC N +
Sbjct: 310 FETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIE-ANSVTLLAIVSACTNSTL 368
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVG 317
VH ++ G+ S + + NAL+DMYAKC L AA+ +F E++ KD+VSW+S+I
Sbjct: 369 LSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINA 428
Query: 318 TAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
HG EAL ++ M+ + +++ F+ ++ AC++ GLV + + +F + Y +
Sbjct: 429 YGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPV 487
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR-IADK 436
+L+HY C ++L R G +D+A + MP+ P W++LLSAC+ HG +A + IA++
Sbjct: 488 TLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANE 547
Query: 437 LLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
L+ +P++P++Y+LLS ++ + + +VR++M +++ K G+S I+
Sbjct: 548 LMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 193/421 (45%), Gaps = 44/421 (10%)
Query: 19 RQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWAS 77
+Q PFL +LH +K+G N+L+ Y K ++FD + HRD VS+ S
Sbjct: 59 QQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCS 118
Query: 78 VLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
++++C L + A+ + + + GF P + ++L+ C MG + HA L+
Sbjct: 119 IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGS-SSKVARMFHALVLV 177
Query: 138 SPYANDDVVKST-LVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR 196
+ V+ ST LVDMY KF + A
Sbjct: 178 DERMQESVLLSTALVDMYLKFD-------------------------------DHAAAFH 206
Query: 197 LFRESPYKNLFAWTALISGLVQSGN---GVDAFYTFVKMRQEGITIADPLVLSSVVGACA 253
+F + KN +WTA+ISG V + N GVD F M++E + + + L SV+ AC
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA---MQRENLR-PNRVTLLSVLPACV 262
Query: 254 NLAVWE-LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
L L K++HG G + ++ A + MY +C ++ ++ +F +DVV W+
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
S+I G A+ G E + L + M ++ N VT + ++ AC+N L+S + S +
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV-HSQILK 381
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
G + L+D++++ G L A + + D +W+++++A HG+ A+
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYEL-TEKDLVSWSSMINAYGLHGHGSEALE 440
Query: 433 I 433
I
Sbjct: 441 I 441
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 244 VLSSVVGACA-NLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
+L SV+ ACA + LG Q+H L + G + +SN+L+ MYAK S A + +F E
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 303 MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
M +D VS+ SII Q G EA+ L +M P L+ C+ +G SK
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 363 RALFRSMV-EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSAC 421
+F ++V D ++ S+ T L+D++ + A ++ M V +E +W A++S C
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV-KNEVSWTAMISGC 226
Query: 422 KHHGNTQMAVRIADKLLCLKPED--PSSYILLSNVYAGASMWENVSKVRKL 470
+ N +M V D ++ E+ P+ LLS + A + S V+++
Sbjct: 227 VANQNYEMGV---DLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEI 274
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 224/479 (46%), Gaps = 27/479 (5%)
Query: 27 KLHAQIIKSG-----LSQHEPFPNTLL-------DAYGKCGLLQDALQLFDTLPHRDLVS 74
+ HAQ I SG Q+ F N L A ++ A +F + +
Sbjct: 22 QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFC 81
Query: 75 WASVLSACNLANLPHRALSISR-----SLLHQGFQPDHFVFSTLIKACANMGPLHVNQGK 129
+ +++ C L H S+S + + PD F + KACA + K
Sbjct: 82 FNTIIRICTL----HEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVK 137
Query: 130 QVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSG 189
+H L +D +TL+ +Y+ D +FD + +++ +I G ++
Sbjct: 138 TLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAR 197
Query: 190 RRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV 249
A LF P ++L +W +LISG Q + +A F +M G+ D + + S +
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK-PDNVAIVSTL 256
Query: 250 GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV 309
ACA W+ GK +H F++ LVD YAKC + A IF S K +
Sbjct: 257 SACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLF 316
Query: 310 SWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
+W ++I G A HG E + + MVS+ +KP+ VTF+ ++ CS+ GLV + R LF M
Sbjct: 317 TWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM 376
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEP----TWAALLSACKHHG 425
Y + ++HY C+ DL R+G ++EA +I MP W+ LL C+ HG
Sbjct: 377 RSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
Query: 426 NTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLM-MVKEVKKEPGYS 483
N ++A + A+++ L PED Y ++ +YA A WE V KVR+++ K+VKK G+S
Sbjct: 437 NIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 37/245 (15%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT----------------- 66
L K LH Q ++ GL NTL+ Y + ALQLFD
Sbjct: 135 LVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLV 194
Query: 67 --------------LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFST 112
+P RDLVSW S++S N A+ + ++ G +PD+ +
Sbjct: 195 KAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVS 254
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
+ ACA G +GK +H + D + + LVD YAK G D +F+ S
Sbjct: 255 TLSACAQSGDWQ--KGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD 312
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYT 228
+W AMI+G A G + FR+ + + +++ G SG +A
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
Query: 229 FVKMR 233
F +MR
Sbjct: 373 FDQMR 377
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 242/483 (50%), Gaps = 54/483 (11%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDA-------LQLFDTLPHRDLVSWASVL 79
++H QI S L Q++ F + L L +D L D+ P +W +
Sbjct: 31 QIHGQIHLSSL-QNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPS----TWNMLS 85
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
+ ++ P ++ + + +G +P+ F L+KACA+ L + G+Q+ L
Sbjct: 86 RGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASF--LGLTAGRQIQVEVLKHG 143
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
+ D V + L+ +Y + S+A ++F
Sbjct: 144 FDFDVYVGNNLIHLYGT-------------------------------CKKTSDARKVFD 172
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACA-NLAVW 258
E +N+ +W ++++ LV++G F F +M + D + ++ AC NL+
Sbjct: 173 EMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC-PDETTMVVLLSACGGNLS-- 229
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGT 318
LGK VH V+ E + ALVDMYAK L A+ +F M K+V +W+++IVG
Sbjct: 230 -LGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGL 288
Query: 319 AQHGQAEEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
AQ+G AEEAL L+ M+ + V+PN VTF+G++ ACS+ GLV G F M + + IKP
Sbjct: 289 AQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKP 348
Query: 378 SLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACK-HHGNTQMAV--RIA 434
+ HY ++D+ R+G L+EA + I+ MP PD W LLSAC HH + ++
Sbjct: 349 MMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVK 408
Query: 435 DKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
+L+ L+P+ + ++++N +A A MW ++VR++M ++KK G SC++LG H F
Sbjct: 409 KRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRF 468
Query: 495 YAG 497
++G
Sbjct: 469 FSG 471
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++ +++K G N L+ YG C DA ++FD + R++VSW S+++A
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
+ ++ + F PD L+ AC +++ GK VH+ ++ +
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG----NLSLGKLVHSQVMVRELELNCR 248
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF----RES 201
+ + LVDMYAK G +Y R VF+ + N +W+AMI G A+ G EAL+LF +ES
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 202 PYK-NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
+ N + ++ +G D + F +M E I P+++
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDDGYKYFHEM--EKIHKIKPMMI 351
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 247/500 (49%), Gaps = 45/500 (9%)
Query: 26 KKLHAQIIKSGLSQHEPFP-NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
+ +H I+ G + F N+L+D Y K + A ++FD R++VSW S+L+
Sbjct: 246 RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM-GPLHVNQGKQVHAHFLLSPYAND 143
AL + ++ + + D +L++ C PL K +H + Y ++
Sbjct: 306 NQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC---KSIHGVIIRRGYESN 362
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+V S+L+D Y L D V DS++ Y
Sbjct: 363 EVALSSLIDAYTSCSLVDDAGTVLDSMT-------------------------------Y 391
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
K++ + + +ISGL +G +A F MR + + + S++ AC+ A K
Sbjct: 392 KDVVSCSTMISGLAHAGRSDEAISIFCHMRD----TPNAITVISLLNACSVSADLRTSKW 447
Query: 264 VHGLVIGLGYE-SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
HG+ I + + + ++VD YAKC + A+ F +++ K+++SWT II A +G
Sbjct: 448 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
++ALAL+D+M PN VT++ + AC++ GLV KG +F+SMVE+ KPSLQHY
Sbjct: 508 LPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHY 566
Query: 383 TCLLDLFSRSGHLDEAENLIRTMP--VSPDEPTWAALLSACKHHGNTQMAV-RIADKLLC 439
+C++D+ SR+G +D A LI+ +P V W A+LS C++ + + ++L
Sbjct: 567 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLE 626
Query: 440 LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGET 499
L+P S Y+L S+ +A WE+V+ +R+L+ ++V+ GYS + G + F AG+
Sbjct: 627 LEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Query: 500 SHPMKDEILGLMRKLDAEMR 519
E+ +++ L M+
Sbjct: 687 LSQSDSELNDVVQSLHRCMK 706
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 230/520 (44%), Gaps = 101/520 (19%)
Query: 23 FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
F +K+H +I+SG N++L Y L A +LFD + RD++SW+ V+ +
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSY 200
Query: 83 NLANLPHRALSISRSLLHQG-FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ P L + + ++H+ +PD ++++KAC M + V G+ VH + +
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV--GRSVHGFSIRRGFD 258
Query: 142 NDDV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
DV V ++L+DMY+K D VFD + N +SW ++++G+ + R EAL +F
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFH- 317
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL 260
M QE + + D + + S++ C
Sbjct: 318 ------------------------------LMVQEAVEV-DEVTVVSLLRVCKFFEQPLP 346
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
K +HG++I GYES ++L+D Y CS + A + M+ KDVVS +++I G A
Sbjct: 347 CKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAH 406
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACS-----NVGLVSKGRALFRSM-VEDYG 374
G+++EA++++ M R PN +T + L+ ACS + G A+ RS+ + D
Sbjct: 407 AGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDIS 463
Query: 375 IKPSLQH-------------------------YTCLLDLFSRSGHLDEAENLIRTMP--- 406
+ S+ +T ++ ++ +G D+A L M
Sbjct: 464 VGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 407 VSPDEPTWAALLSACKHHGNTQMAVRIADKLL------------CL------KPEDPSSY 448
+P+ T+ A LSAC H G + + I ++ C+ E ++
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAV 583
Query: 449 ILLSN----VYAGASMWENV-----SKVRKLMMVKEVKKE 479
L+ N V AGAS W + ++ +KL++ EV E
Sbjct: 584 ELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAE 623
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 242/540 (44%), Gaps = 86/540 (15%)
Query: 29 HAQIIKSGLSQHEPF-----------------PNTLLDAYGKCGLLQDALQLFDTLPHRD 71
+++I ++G+ ++PF N++ D Y KCG L L+ FD + RD
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRD 91
Query: 72 LVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQV 131
VSW ++ L L GF+P+ +I AC ++ G+++
Sbjct: 92 SVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF----DGEKI 147
Query: 132 HAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRR 191
H + + S + V+++++ MYA DS+S
Sbjct: 148 HGYVIRSGFCGISSVQNSILCMYADS----------DSLS-------------------- 177
Query: 192 SEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA 251
A +LF E +++ +W+ +I VQS V F +M E T D + ++SV+ A
Sbjct: 178 --ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKA 235
Query: 252 CANLAVWELGKQVHGLVIGLGYE-SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
C + ++G+ VHG I G++ + VF+ N+L+DMY+K D+ +A +F E + +++VS
Sbjct: 236 CTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS 295
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV 370
W SI+ G + + +EAL ++ MV V+ +EVT V L+ C +++ ++
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 371 EDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMA 430
G + + + L+D ++ +D+A ++ +M D + + ++S H G + A
Sbjct: 356 R-RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY-KDVVSCSTMISGLAHAGRSDEA 413
Query: 431 VRIADKLLCLKPEDPSSYILLSNVYAGA-------SMWENVSKVRKLMMVKEVKKEPGYS 483
+ I C + P++ ++S + A + S W + +R+ + + ++ G S
Sbjct: 414 ISI----FCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDIS--VGTS 467
Query: 484 CID-LGKESHVFYAGETSHPMKDE-------------ILGLMRK---LDAEMRKRGYVPD 526
+D K + A T + ++ I GL K L EM+++GY P+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 15/211 (7%)
Query: 20 QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
+ P K +H II+ G +E ++L+DAY C L+ DA + D++ ++D+VS ++++
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
S A A+SI H P+ +L+ AC+ L + K H +
Sbjct: 402 SGLAHAGRSDEAISI---FCHMRDTPNAITVISLLNACSVSADLRTS--KWAHGIAIRRS 456
Query: 140 YANDDV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF 198
A +D+ V +++VD YAK G + R FD I+ N ISWT +IS YA +G +AL LF
Sbjct: 457 LAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALF 516
Query: 199 RESPYK----NLFAWTALIS-----GLVQSG 220
E K N + A +S GLV+ G
Sbjct: 517 DEMKQKGYTPNAVTYLAALSACNHGGLVKKG 547
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 219 SGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVF 278
SG + + ++++ G+ DP V V ACA L+ W +F
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS-W------------------LF 62
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR 338
N++ D Y KC DL + F M+ +D VSW I+ G +G EE L + +
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 339 VKPNEVTFVGLIYACSNV 356
+PN T V +I+AC ++
Sbjct: 123 FEPNTSTLVLVIHACRSL 140
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 204/388 (52%), Gaps = 7/388 (1%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H +IIK L+ + L+ G Q A +F+ L +W ++ + ++
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 86 NLPHRAL--SISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
+ P AL I + HQ Q D F F +IKAC + + G QVH + + + ND
Sbjct: 97 HKPREALLLFILMMISHQS-QFDKFTFPFVIKAC--LASSSIRLGTQVHGLAIKAGFFND 153
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
++TL+D+Y K G PD GR VFD + + +SWT M+ G + + A +F + P
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+N+ +WTA+I+ V++ +AF F +M+ + + + + +++ A L +G+
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK-PNEFTIVNLLQASTQLGSLSMGRW 272
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
VH G+ F+ AL+DMY+KC L A+ +F M K + +W S+I HG
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGC 332
Query: 324 AEEALALY-DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
EEAL+L+ + A V+P+ +TFVG++ AC+N G V G F M++ YGI P +H
Sbjct: 333 GEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHN 392
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPD 410
C++ L ++ +++A NL+ +M PD
Sbjct: 393 ACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 38/254 (14%)
Query: 17 VARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWA 76
+A S L ++H IK+G F NTL+D Y KCG ++FD +P R +VSW
Sbjct: 130 LASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWT 189
Query: 77 SVL------SACNLANL-------------------------PHRALSISRSLLHQGFQP 105
++L S + A + P A + R + +P
Sbjct: 190 TMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP 249
Query: 106 DHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRA 165
+ F L++A +G L + G+ VH + + + D + + L+DMY+K G R
Sbjct: 250 NEFTIVNLLQASTQLGSLSM--GRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARK 307
Query: 166 VFDSISSLNSISWTAMISGYARSGRRSEALRLFRE-----SPYKNLFAWTALISGLVQSG 220
VFD + + +W +MI+ G EAL LF E S + + ++S +G
Sbjct: 308 VFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
Query: 221 NGVDAFYTFVKMRQ 234
N D F +M Q
Sbjct: 368 NVKDGLRYFTRMIQ 381
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 231/464 (49%), Gaps = 16/464 (3%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K +HAQ +K+GL L+ Y + G ++ A + FD + ++ VSW S+L
Sbjct: 124 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY--- 180
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L L +R + + + D ++ +I + A G + N A L SP + +
Sbjct: 181 -LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMG-NACSLFSAMPLKSPASWN-- 236
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
L+ Y R FD++ N +SW MISGY + G A LFR K+
Sbjct: 237 ---ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIA-DPLVLSSVVGACANLAVWELGKQV 264
+ A+I+ Q+G DA F +M + I D + LSSVV A + L G V
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
+ G + +S +L+D+Y K D A +F +++KD VS++++I+G +G A
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA 413
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
EA +L+ M+ ++ PN VTF GL+ A S+ GLV +G F SM +D+ ++PS HY
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGI 472
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE- 443
++D+ R+G L+EA LI++MP+ P+ W ALL A H N + C+K E
Sbjct: 473 MVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSH--CVKLET 530
Query: 444 DPSSYIL-LSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCID 486
DP+ Y+ L+ +Y+ W++ VR + K++ K G S ++
Sbjct: 531 DPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 188/405 (46%), Gaps = 18/405 (4%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGK---CGLLQDALQLFDTLPHRDLVSWASVLSAC 82
K++HAQ++ + + EP + K ++ ++ D SW ++
Sbjct: 20 KQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFL 79
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ + + + + G P +++++AC M ++ GK +HA L +
Sbjct: 80 SQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME--NMVDGKPIHAQALKNGLCG 137
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
V++ LV +Y++ G + + FD I+ N++SW +++ GY SG EA R+F + P
Sbjct: 138 CVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIP 197
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
K+ +W +IS + G+ +A F M + P + ++G N +L +
Sbjct: 198 EKDAVSWNLIISSYAKKGDMGNACSLFSAM-----PLKSPASWNILIGGYVNCREMKLAR 252
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
+ S + ++ Y K D+ +A+ +F MS+KD + + ++I Q+G
Sbjct: 253 TYFDAMPQKNGVSWI----TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNG 308
Query: 323 QAEEALALYDDMV--SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
+ ++AL L+ M+ ++ ++P+E+T ++ A S +G S G S + ++GIK
Sbjct: 309 KPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDL 367
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
T L+DL+ + G +A + + D +++A++ C +G
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGING 411
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 242/501 (48%), Gaps = 43/501 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L ++LH + K G + N+L+ Y L+DA ++FD +P D++SW S++S
Sbjct: 73 LCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACA--NMGPLHVNQGKQVHAHFL-LSPY 140
+ + + L P+ F F+ + ACA ++ PL G +H+ + L
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPL----GACIHSKLVKLGLE 188
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
+ VV + L+DMY K G D VF + +++SW A+++ +R+G+ L F +
Sbjct: 189 KGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQ 248
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYT-------------------------------F 229
P + + LI V+SG+ +AF F
Sbjct: 249 MPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFF 308
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
KM G+ D LS V+ A A LAV G +H LG +S V +++AL+DMY+K
Sbjct: 309 TKMHSSGVRF-DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSK 367
Query: 290 CSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR-VKPNEVTFVG 348
C L A+ +F M RK+++ W +I G A++G + EA+ L++ + R +KP+ TF+
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 349 LIYACSNVGL-VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV 407
L+ CS+ + + F M+ +Y IKPS++H L+ + G + +A+ +I+
Sbjct: 428 LLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGF 487
Query: 408 SPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS--YILLSNVYAGASMWENVS 465
D W ALL AC + + A +A K++ L D YI++SN+YA W V
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVG 547
Query: 466 KVRKLMMVKEVKKEPGYSCID 486
++RK+M V KE G S ID
Sbjct: 548 QIRKIMRESGVLKEVGSSWID 568
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 144/353 (40%), Gaps = 87/353 (24%)
Query: 74 SWASVLSACNLANLPH-RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
SW++++ A LA L + L++ G +PD L++ N G +V+ +Q+H
Sbjct: 23 SWSTIVPA--LARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYG--YVSLCRQLH 78
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
+ + ++ + ++L+ Y + VFD + + ISW +++SGY +SGR
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 193 EALRLF----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSV 248
E + LF R + N F++TA ++
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALA---------------------------------- 164
Query: 249 VGACANLAVWELGKQVHGLVIGLGYE-SCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD 307
ACA L + LG +H ++ LG E V + N L+DMY KC + A +F M KD
Sbjct: 165 --ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKD 222
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFR 367
VSW +I+ +++G+ E L + M PN
Sbjct: 223 TVSWNAIVASCSRNGKLELGLWFFHQM------PN------------------------- 251
Query: 368 SMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSA 420
P Y L+D F +SG + A ++ MP +P+ +W +L+
Sbjct: 252 ---------PDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTG 294
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 5/225 (2%)
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITI-ADPLVLSSVVGACANLAVWELGKQVHG 266
+W+ ++ L + G+ + V++ +G A PLV ++ N L +Q+HG
Sbjct: 23 SWSTIVPALARFGS-IGVLRAAVELINDGEKPDASPLV--HLLRVSGNYGYVSLCRQLHG 79
Query: 267 LVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEE 326
V G+ S +SN+L+ Y L A +F EM DV+SW S++ G Q G+ +E
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
+ L+ ++ + V PNE +F + AC+ + L G + +V+ K ++ CL+
Sbjct: 140 GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 387 DLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
D++ + G +D+A + + M D +W A++++C +G ++ +
Sbjct: 200 DMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGL 243
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 245/501 (48%), Gaps = 77/501 (15%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L+ Y + G + A +LFD + RD VSW ++++ A + + G +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 105 PDHFVFSTL-----------------------------------IKACANMGPLHVNQGK 129
++T+ +KAC+++G L GK
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGAL--KWGK 340
Query: 130 QVHAHFLLS-PYAND-DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
H + S +++D D V+++L+ MY++ + VF + + + +W ++ISG+A
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
+ R E L +E L+SG IT+A L L +
Sbjct: 401 NERSEETSFLLKE----------MLLSGF----------------HPNHITLASILPLFA 434
Query: 248 VVGACANLAVWELGKQVHGLVIGL-GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
VG NL + GK+ H ++ Y+ C+ + N+LVDMYAK +++AAK +F M ++
Sbjct: 435 RVG---NL---QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
D V++TS+I G + G+ E ALA + DM + +KP+ VT V ++ ACS+ LV +G LF
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
M +GI+ L+HY+C++DL+ R+G+LD+A ++ T+P P A LL AC HGN
Sbjct: 549 TKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
Query: 427 TQMAVRIADKLLC-LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
T + ADKLL KPE Y+LL+++YA W + V+ L+ V+K ++ +
Sbjct: 609 TNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALM 668
Query: 486 DLGKESHVFYAGETSHPMKDE 506
+ E GE + PM D+
Sbjct: 669 ETDSE----LDGENNKPMNDD 685
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 210/435 (48%), Gaps = 19/435 (4%)
Query: 8 YALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
Y+ S LS+ + F+ ++LHA I SGL L+ Y LL +A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
+ W ++ + ++S+ + ++ +G + D F + ++IKACA + L
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL--LDFA 201
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
G+ VH +S + + V + L+ MY +FG D R +FD +S +++SW A+I+ Y
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 187 RSGRRSEAL----RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
+ EA R++ ++ W + G +++GN + A V MR + I
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVF------ISNALVDMYAKCSDLVAA 296
+++ + AC+++ + GK H LVI SC F + N+L+ MY++CSDL A
Sbjct: 322 AMINGL-KACSHIGALKWGKVFHCLVI----RSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+F ++ + +W SII G A + ++EE L +M+ + PN +T ++ + V
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
G + G+ ++ K L + L+D++++SG + A+ + +M D+ T+ +
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTS 495
Query: 417 LLSACKHHGNTQMAV 431
L+ G ++A+
Sbjct: 496 LIDGYGRLGKGEVAL 510
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 50/285 (17%)
Query: 26 KKLHAQIIKSGLSQHE--PFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K H +I+S H+ N+L+ Y +C L+ A +F + L +W S++S
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL-SPYAN 142
+ + +L GF P+H ++++ A +G L GK+ H + L Y +
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQ--HGKEFHCYILRRQSYKD 457
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
++ ++LVDMYAK G + VFDS+ + +++T++I GY R G+ AL
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL------- 510
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV----- 257
AW F M + GI D + + +V+ AC++ +
Sbjct: 511 -----AW-------------------FKDMDRSGIK-PDHVTMVAVLSACSHSNLVREGH 545
Query: 258 WELGKQVH--GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
W K H G+ + L + SC +VD+Y + L A+ IF
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSC------MVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 245/501 (48%), Gaps = 77/501 (15%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N L+ Y + G + A +LFD + RD VSW ++++ A + + G +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 105 PDHFVFSTL-----------------------------------IKACANMGPLHVNQGK 129
++T+ +KAC+++G L GK
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGAL--KWGK 340
Query: 130 QVHAHFLLS-PYAND-DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
H + S +++D D V+++L+ MY++ + VF + + + +W ++ISG+A
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
+ R E L +E L+SG IT+A L L +
Sbjct: 401 NERSEETSFLLKE----------MLLSGF----------------HPNHITLASILPLFA 434
Query: 248 VVGACANLAVWELGKQVHGLVIGL-GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
VG NL + GK+ H ++ Y+ C+ + N+LVDMYAK +++AAK +F M ++
Sbjct: 435 RVG---NL---QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
D V++TS+I G + G+ E ALA + DM + +KP+ VT V ++ ACS+ LV +G LF
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGN 426
M +GI+ L+HY+C++DL+ R+G+LD+A ++ T+P P A LL AC HGN
Sbjct: 549 TKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
Query: 427 TQMAVRIADKLLC-LKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
T + ADKLL KPE Y+LL+++YA W + V+ L+ V+K ++ +
Sbjct: 609 TNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALM 668
Query: 486 DLGKESHVFYAGETSHPMKDE 506
+ E GE + PM D+
Sbjct: 669 ETDSE----LDGENNKPMNDD 685
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 210/435 (48%), Gaps = 19/435 (4%)
Query: 8 YALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
Y+ S LS+ + F+ ++LHA I SGL L+ Y LL +A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
+ W ++ + ++S+ + ++ +G + D F + ++IKACA + L
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL--LDFA 201
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
G+ VH +S + + V + L+ MY +FG D R +FD +S +++SW A+I+ Y
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 187 RSGRRSEAL----RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
+ EA R++ ++ W + G +++GN + A V MR + I
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVF------ISNALVDMYAKCSDLVAA 296
+++ + AC+++ + GK H LVI SC F + N+L+ MY++CSDL A
Sbjct: 322 AMINGL-KACSHIGALKWGKVFHCLVI----RSCSFSHDIDNVRNSLITMYSRCSDLRHA 376
Query: 297 KYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+F ++ + +W SII G A + ++EE L +M+ + PN +T ++ + V
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
G + G+ ++ K L + L+D++++SG + A+ + +M D+ T+ +
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTS 495
Query: 417 LLSACKHHGNTQMAV 431
L+ G ++A+
Sbjct: 496 LIDGYGRLGKGEVAL 510
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 50/285 (17%)
Query: 26 KKLHAQIIKSGLSQHE--PFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
K H +I+S H+ N+L+ Y +C L+ A +F + L +W S++S
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL-SPYAN 142
+ + +L GF P+H ++++ A +G L GK+ H + L Y +
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQ--HGKEFHCYILRRQSYKD 457
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
++ ++LVDMYAK G + VFDS+ + +++T++I GY R G+ AL
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL------- 510
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV----- 257
AW F M + GI D + + +V+ AC++ +
Sbjct: 511 -----AW-------------------FKDMDRSGIK-PDHVTMVAVLSACSHSNLVREGH 545
Query: 258 WELGKQVH--GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIF 300
W K H G+ + L + SC +VD+Y + L A+ IF
Sbjct: 546 WLFTKMEHVFGIRLRLEHYSC------MVDLYCRAGYLDKARDIF 584
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 246/507 (48%), Gaps = 52/507 (10%)
Query: 10 LKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD----ALQLFD 65
L SQ + +Q K H+ I GL ++ + LL A+ L A +FD
Sbjct: 16 LASQRCNTVKQ----IKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFD 71
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLL---HQGFQPDHFVFSTLIKACANMGP 122
++ + + +++ C+ ++ PH L ++ + P + F LI AC +
Sbjct: 72 SIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVAC--LKA 129
Query: 123 LHVNQGKQVHAHFLLSP-YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAM 181
+ GKQ+H + + + +D V++ ++ +Y + L R VFD I
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEI----------- 178
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
P ++ W L++G V+ G G + F +M +G+ D
Sbjct: 179 --------------------PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE-PD 217
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIF 300
+++ + ACA + GK +H V + ES VF+ ALVDMYAKC + A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR-VKPNEVTFVGLIYACSNVGLV 359
+++R++V SW ++I G A +G A++A+ + + +KP+ V +G++ AC++ G +
Sbjct: 278 KKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
+GR++ +M Y I P +HY+C++DL R+G LD+A NLI MP+ P W ALL+
Sbjct: 338 EEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLN 397
Query: 420 ACKHHGNTQMAVRIADKLLCLK----PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
C+ H N ++ LL L+ E+ ++ + LSN+Y SKVR ++ +
Sbjct: 398 GCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRG 457
Query: 476 VKKEPGYSCIDLGKESHVFYAGETSHP 502
V+K PG+S +++ F +G+ SHP
Sbjct: 458 VRKTPGWSVLEVDGNVTKFVSGDVSHP 484
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 215/406 (52%), Gaps = 7/406 (1%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L ++LH ++K G S + +++D YGKC ++ DA ++FD + + VSW ++
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
A+ + +L +P + S+++ AC+ L V GK +HA + D
Sbjct: 240 EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEV--GKVIHAIAVKLSVVAD 297
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
VV +++ DMY K + R VFD S + SWT+ +SGYA SG EA LF P
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+N+ +W A++ G V + +A MRQE I D + L ++ C+ ++ ++GKQ
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE-IENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR-KDVVSWTSIIVGTAQHG 322
HG + GY++ V ++NAL+DMY KC L +A F +MS +D VSW +++ G A+ G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
++E+AL+ ++ M KP++ T L+ C+N+ ++ G+A+ ++ D G K +
Sbjct: 477 RSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVIR 534
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
++D++S+ D A + + + D W +++ C +G ++
Sbjct: 535 GAMVDMYSKCRCFDYAIEVFKE-AATRDLILWNSIIRGCCRNGRSK 579
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 184/393 (46%), Gaps = 38/393 (9%)
Query: 48 LDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDH 107
+ Y GL ++A +LFD +P R++VSW ++L A+ AL + + D+
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 108 FVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVF 167
++ C+ G V GKQ H Y + +V + L+DMY K G F
Sbjct: 396 VTLVWILNVCS--GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 168 DSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFY 227
+S L ++ +W AL++G+ + G A
Sbjct: 454 RQMSEL------------------------------RDEVSWNALLTGVARVGRSEQALS 483
Query: 228 TFVKMRQEGITIADP--LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVD 285
F M+ E A P L++++ CAN+ LGK +HG +I GY+ V I A+VD
Sbjct: 484 FFEGMQVE----AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 286 MYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVT 345
MY+KC A +F E + +D++ W SII G ++G+++E L+ + + VKP+ VT
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 346 FVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
F+G++ AC G V G F SM Y I P ++HY C+++L+ + G L + E + M
Sbjct: 600 FLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
Query: 406 PVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
P P + AC+ + +++ A +L+
Sbjct: 660 PFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 198/461 (42%), Gaps = 77/461 (16%)
Query: 28 LHAQIIKSGLSQHEPFP-----NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
+ A+ ++S L P P N ++AYGKCG + DA +LF+ +P RD SW +V++AC
Sbjct: 78 VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ + R + G + F+ ++K+C + L + +Q+H + Y+
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI--LDLRLLRQLHCAVVKYGYSG 195
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
+ +++++VD+Y K + R VFD I + + +SW ++ Y G EA+ +
Sbjct: 196 NVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM----- 250
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL--VLSSVVGACANLAVWEL 260
F KM + + PL +SSV+ AC+ E+
Sbjct: 251 --------------------------FFKMLELNVR---PLNHTVSSVMLACSRSLALEV 281
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
GK +H + + L + +S ++ DMY KC L +A+ +F + KD+ SWTS + G A
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAM 341
Query: 321 HGQAEEALALYD-----------DMVSARVKPNE--------------------VTFVGL 349
G EA L+D M+ V +E VT V +
Sbjct: 342 SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWI 401
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSP 409
+ CS + V G+ + +G ++ LLD++ + G L A R M
Sbjct: 402 LNVCSGISDVQMGKQA-HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 410 DEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYIL 450
DE +W ALL+ G ++ A+ + + PS Y L
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFEGMQV--EAKPSKYTL 499
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPH-RDLVSWASVLSAC 82
+ K+ H I + G + N LLD YGKCG LQ A F + RD VSW ++L+
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ALS + + +P + +TL+ CAN+ L N GK +H + Y
Sbjct: 473 ARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPAL--NLGKAIHGFLIRDGYKI 529
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF 198
D V++ +VDMY+K DY VF ++ + I W ++I G R+GR E LF
Sbjct: 530 DVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 29/330 (8%)
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
I Y + G +A LF E P ++ +W A+I+ Q+G + F F +M ++G+ A
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR-AT 161
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
+ V+ +C + L +Q+H V+ GY V + ++VD+Y KC + A+ +F
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 302 EMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS-----NV 356
E+ VSW I+ + G +EA+ ++ M+ V+P T ++ ACS V
Sbjct: 222 EIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEV 281
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
G V A+ S+V D + T + D++ + L+ A + S D +W +
Sbjct: 282 GKVIHAIAVKLSVVADTVVS------TSVFDMYVKCDRLESARRVF-DQTRSKDLKSWTS 334
Query: 417 LLSACKHHGNTQMAVRIADKLLCLKPE-DPSSYILLSNVYAGASMW-----------ENV 464
+S G T R A +L L PE + S+ + Y A W + +
Sbjct: 335 AMSGYAMSGLT----REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 465 SKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
+ + +V + G S + +GK++H F
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS 310
+C++ A+ ++V ++ +F+ N ++ Y KC + A+ +F EM +D S
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGS 129
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL--FRS 368
W ++I AQ+G ++E ++ M V+ E +F G++ +C GL+ R L
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQLHC 186
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQ 428
V YG ++ T ++D++ + + +A + + V+P + +W ++ G
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIVRRYLEMGFND 245
Query: 429 MAVRIADKLLCLK 441
AV + K+L L
Sbjct: 246 EAVVMFFKMLELN 258
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
Y L + L+ A L K +H +I+ G ++D Y KC A+++F
Sbjct: 497 YTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE 556
Query: 67 LPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
RDL+ W S++ C + L ++G +PDH F +++AC G HV
Sbjct: 557 AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG--HVE 614
Query: 127 QGKQ----VHAHFLLSPYANDDVVKSTLVDMYAKFG 158
G Q + + +SP ++++Y K+G
Sbjct: 615 LGFQYFSSMSTKYHISPQVEH---YDCMIELYCKYG 647
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 192/386 (49%), Gaps = 25/386 (6%)
Query: 233 RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSD 292
R EG + P + + C + + K VH + S + N++++MY+ C
Sbjct: 173 RNEGYVVDLPRLFW-IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGS 231
Query: 293 LVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA 352
+ A +F M +++ +W +I A++GQ E+A+ + KP+ F + +A
Sbjct: 232 VEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFA 291
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEP 412
C +G +++G F SM ++YGI P ++HY L+ + + G+LDEA + +M P+
Sbjct: 292 CGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVD 349
Query: 413 TWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMM 472
W L++ + HG+ + R D + E + L AG + V+ +
Sbjct: 350 LWETLMNLSRVHGDLILGDRCQDMV-----EQLDASRLNKESKAG------LVPVKSSDL 398
Query: 473 VKE----VKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTS 528
VKE + K P Y AG+ S P E+ ++ L M + GYVP +
Sbjct: 399 VKEKLQRMAKGPNYGI-------RYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSK 451
Query: 529 YVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIE 588
LHD+DQ+ K+ LF H+ER A L ++IR++KNLRVC DCH LKL+S I
Sbjct: 452 LALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIV 511
Query: 589 SREIYVRDAKRYHHFKDGKCSCNDFW 614
RE+ RDAKR+HH KDG CSC ++W
Sbjct: 512 GRELISRDAKRFHHMKDGVCSCREYW 537
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 248/522 (47%), Gaps = 52/522 (9%)
Query: 10 LKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD----ALQLFD 65
L SQ + +Q K H+ I GL ++ + LL A+ L A +FD
Sbjct: 16 LASQRCNTVKQ----IKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFD 71
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLL---HQGFQPDHFVFSTLIKACANMGP 122
++ + + +++ C+ ++ PH L ++ + P + F LI AC
Sbjct: 72 SIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 123 LHVNQGKQVHAHFLLSP-YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAM 181
V GKQ+H + + + +D V++ ++ +Y + L R VFD I
Sbjct: 132 FSV--GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI----------- 178
Query: 182 ISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
P ++ W L++G V+ G G + F +M GI D
Sbjct: 179 --------------------PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE-PD 217
Query: 242 PLVLSSVVGACANLAVWELGKQVHGLVIGLGY-ESCVFISNALVDMYAKCSDLVAAKYIF 300
+++ + ACA + GK +H V + ES VF+ ALVDMYAKC + A +F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 301 CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSAR-VKPNEVTFVGLIYACSNVGLV 359
+++R++V SW ++I G A +G A++A D + +KP+ V +G++ AC++ G +
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFL 337
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLS 419
+GR + +M YGI P +HY+C++DL R+G LD+A +LI MP+ P W ALL+
Sbjct: 338 EEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLN 397
Query: 420 ACKHHGNTQMAVRIADKLLCLK----PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKE 475
C+ H N ++ LL L+ E+ ++ + LSN+Y KVR ++ +
Sbjct: 398 GCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRG 457
Query: 476 VKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAE 517
++K PG+S +++ F +G+ SHP +I L+ L +
Sbjct: 458 IRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVD 499
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 182/342 (53%), Gaps = 4/342 (1%)
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
V++ LV MY G VFD + N ++W MI+G G +AL + P +
Sbjct: 160 VQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRT 219
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ +WT +I G + +A F +M + + + +++ A NL ++ VH
Sbjct: 220 VVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVH 279
Query: 266 GLVIGLGYESC-VFISNALVDMYAKCSDLVAAKYIFCEM--SRKDVVSWTSIIVGTAQHG 322
V G+ C + ++N+L+D YAKC + +A F E+ RK++VSWT++I A HG
Sbjct: 280 AYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHG 339
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG-RALFRSMVEDYGIKPSLQH 381
+EA++++ DM +KPN VT + ++ ACS+ GL + F +MV +Y I P ++H
Sbjct: 340 MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH 399
Query: 382 YTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLK 441
Y CL+D+ R G L+EAE + +P+ W LL AC + + ++A R+ KL+ L+
Sbjct: 400 YGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELE 459
Query: 442 PEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS 483
Y+L+SN++ G + + + RK M V+ V K PG+S
Sbjct: 460 RSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 37/202 (18%)
Query: 34 KSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-----------C 82
K G H L+ Y G + DA ++FD +P R+ V+W +++ C
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 83 NLANLPHRA---------------------LSISRSLLHQGFQPDHFVFSTLIKACANMG 121
L +P+R L SR + +P+ ++ A N+G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 122 PLHVNQGKQVHAHFLLSPYANDDV-VKSTLVDMYAKFGLPDYGRAVFDSISS--LNSISW 178
L + VHA+ + D+ V ++L+D YAK G F I + N +SW
Sbjct: 271 DLKM--CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSW 328
Query: 179 TAMISGYARSGRRSEALRLFRE 200
T MIS +A G EA+ +F++
Sbjct: 329 TTMISAFAIHGMGKEAVSMFKD 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 28 LHAQIIKSGLSQHE-PFPNTLLDAYGKCGLLQDALQLFDTLPH--RDLVSWASVLSACNL 84
+HA + K G + N+L+DAY KCG +Q A + F +P+ ++LVSW +++SA +
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
+ A+S+ + + G +P+ +++ AC++ G
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 238/491 (48%), Gaps = 46/491 (9%)
Query: 3 LSRHAYALKSQLSSVARQ-SPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDAL 61
L+ ++ + L S +R+ + + LH ++SG N L+ Y CG + DA
Sbjct: 121 LTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDAR 180
Query: 62 QLFDTLPHR-DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
++FD +P D V+++++++ + AL + R + + + + A +++
Sbjct: 181 KVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDL 240
Query: 121 GPLHVNQGKQVHAHFLLSPYAND-DV-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISW 178
G L + AH L D D+ + + L+ MY K G R +FD + ++W
Sbjct: 241 GDLSGAES----AHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTW 296
Query: 179 TAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
MI YA++G E + L R+ Y+ + ++ GL+ S +A + G T
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFV-------GRT 349
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+AD L E + ++G ALVDMYAK L A
Sbjct: 350 VADLL---------------EEERIALDAILG----------TALVDMYAKVGLLEKAVE 384
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM--VSARVKPNEVTFVGLIYACSNV 356
IF M KDV SWT++I G HG A EA+ L++ M + +V+PNE+TF+ ++ ACS+
Sbjct: 385 IFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHG 444
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAA 416
GLV +G F+ MVE Y P ++HY C++DL R+G L+EA LIR +P++ D W A
Sbjct: 445 GLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRA 504
Query: 417 LLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEV 476
LL+AC+ +GN + + +L + P+ ILL+ +A A E + +
Sbjct: 505 LLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNE----LNKG 560
Query: 477 KKEPGYSCIDL 487
+KE GYS I++
Sbjct: 561 RKEAGYSAIEI 571
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 242/471 (51%), Gaps = 39/471 (8%)
Query: 26 KKLHAQIIKSGLSQHEPFP-NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
+++H I SG+S++ N+++D Y + G+ AL +F T+ RD+VSW ++ +C+
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSD 212
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+ AL + QPD + S ++ C+++ L ++GKQ A + + ++
Sbjct: 213 SGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLREL--SKGKQALALCIKMGFLSNS 270
Query: 145 VVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK 204
+V +DM++K D +F + +S+ +MI Y+ +ALRLF
Sbjct: 271 IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF------ 324
Query: 205 NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQV 264
I + QS +R + T + VLSS+ N + + G V
Sbjct: 325 --------ILAMTQS------------VRPDKFTFSS--VLSSM-----NAVMLDHGADV 357
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
H LVI LG++ ++ +L++MY K + A +F + KD++ W ++I+G A++ +A
Sbjct: 358 HSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRA 417
Query: 325 EEALALYDDMV-SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
E+LA+++ ++ + +KP+ VT +G++ AC G V++G +F SM + +G+ P +HY
Sbjct: 418 VESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYA 477
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
C+++L R G ++EA+++ +P P W +L A G+T++A +A +L +P+
Sbjct: 478 CIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPK 537
Query: 444 DPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVF 494
Y++L +Y WEN K+R M ++K G S I + ES VF
Sbjct: 538 SSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISI--ESSVF 586
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 210/449 (46%), Gaps = 18/449 (4%)
Query: 16 SVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSW 75
S+ +SP L K +HAQ++++G + + N L Y K G + +ALQLFD +P ++ ++W
Sbjct: 14 SLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITW 73
Query: 76 ASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH--- 132
+ C + L+ + L + + D ++T+I + G H G +V
Sbjct: 74 ----NVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCG-FH-EYGIRVFFDM 127
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
+ + P + ++LV + G +G A+ +S N + W +++ Y R G
Sbjct: 128 QRWEIRPTEFTFSILASLVTC-VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD 186
Query: 193 EALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
AL +F +++ +W LI SGN A F MR+ I D +S VV C
Sbjct: 187 YALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ-PDEYTVSMVVSIC 245
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
++L GKQ L I +G+ S + A +DM++KC+ L + +F E+ + D V
Sbjct: 246 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCN 305
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
S+I + H E+AL L+ ++ V+P++ TF ++ + N ++ G A S+V
Sbjct: 306 SMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHG-ADVHSLVIK 363
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
G T L++++ ++G +D A + D W ++ + ++
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTD-GKDLIFWNTVIMGLARNSRAVESLA 422
Query: 433 IADKLL---CLKPEDPSSY-ILLSNVYAG 457
I ++LL LKP+ + IL++ YAG
Sbjct: 423 IFNQLLMNQSLKPDRVTLMGILVACCYAG 451
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 176/356 (49%), Gaps = 44/356 (12%)
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS-----EALRLF 198
+++ +TL+ YAK G Y R VFD + S++W AMI GY + +A+ LF
Sbjct: 147 ELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLF 206
Query: 199 RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
R G+GV T + V+ A + +
Sbjct: 207 RR---------------FSCCGSGVRPTDT---------------TMVCVLSAISQTGLL 236
Query: 259 ELGKQVHGLVIGLGY--ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIV 316
E+G VHG + LG+ E VFI ALVDMY+KC L A +F M K+V +WTS+
Sbjct: 237 EIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMAT 296
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
G A +G+ E L + M + +KPNE+TF L+ A ++GLV +G LF+SM +G+
Sbjct: 297 GLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVT 356
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADK 436
P ++HY C++DL ++G + EA I MP+ PD +L +AC +G T M I
Sbjct: 357 PVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKA 416
Query: 437 LLCLKPEDP-------SSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
LL ++ ED Y+ LSNV A W V K+RK M + +K PGYS +
Sbjct: 417 LLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 28 LHAQIIKSG-LSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-CNLA 85
+H + K G L + E TLL Y K G L+ A ++FD +P R V+W +++ C+
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 86 NLPH----RALSISR--SLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL--- 136
+ + +A+ + R S G +P ++ A + G L + G VH +
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEI--GSLVHGYIEKLG 250
Query: 137 LSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALR 196
+P D + + LVDMY+K G + +VF+ + N +WT+M +G A +GR +E
Sbjct: 251 FTPEV-DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 197 LFR---ESPYK-NLFAWTALIS-----GLVQSG 220
L ES K N +T+L+S GLV+ G
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 224/457 (49%), Gaps = 35/457 (7%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H I SGL + + ++ AY K GL+ +A +LF ++P DL W ++
Sbjct: 128 IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+ +++ + H+G QP+ + L + L V VHA L + V
Sbjct: 188 WDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLV--AWSVHAFCLKINLDSHSYVG 245
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF 207
LV+MY++ +VF+SIS +L
Sbjct: 246 CALVNMYSRCMCIASACSVFNSISE-------------------------------PDLV 274
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
A ++LI+G + GN +A + F ++R G D ++++ V+G+CA L+ GK+VH
Sbjct: 275 ACSSLITGYSRCGNHKEALHLFAELRMSGKK-PDCVLVAIVLGSCAELSDSVSGKEVHSY 333
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA 327
VI LG E + + +AL+DMY+KC L A +F + K++VS+ S+I+G HG A A
Sbjct: 334 VIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTA 393
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
+ +++ + P+E+TF L+ C + GL++KG+ +F M ++GI+P +HY ++
Sbjct: 394 FEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVK 453
Query: 388 LFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSS 447
L +G L+EA + ++ D ALLS C+ H NT +A +A+ + E S
Sbjct: 454 LMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSV 513
Query: 448 Y-ILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYS 483
Y ++LSNVYA W+ V ++R + K PG S
Sbjct: 514 YKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 192/456 (42%), Gaps = 77/456 (16%)
Query: 20 QSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVL 79
Q+ T+KLH+ + KS L++ F L Y L A +LFD P R + W S++
Sbjct: 19 QTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSII 78
Query: 80 SACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSP 139
A A+ LS+ +L +PD+F ++ L + + + +H ++S
Sbjct: 79 RAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE--SFDTKGLRCIHGIAIVSG 136
Query: 140 YANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFR 199
D + S +V Y+K GL +F SI + W MI GY G + + LF
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 200 ESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
++ N + AL SGL+ DP +L L
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLI-----------------------DPSLL---------L 224
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSII 315
W VH + + +S ++ ALV+MY++C + +A +F +S D+V+ +S+I
Sbjct: 225 VAW----SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLI 280
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G ++ G +EAL L+ ++ + KP+ V ++ +C+ + G+ + S V G+
Sbjct: 281 TGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV-HSYVIRLGL 339
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTMP----------------------------- 406
+ ++ + L+D++S+ G L A +L +P
Sbjct: 340 ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTE 399
Query: 407 -----VSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+ PDE T++ALL C H G I +++
Sbjct: 400 ILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
K++H+ +I+ GL + L+D Y KCGLL+ A+ LF +P +++VS+ S++ L
Sbjct: 328 KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLH 387
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQV----HAHFLLSPYA 141
A +L G PD FS L+ C + G L N+G+++ + F + P
Sbjct: 388 GFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLL--NKGQEIFERMKSEFGIEPQT 445
Query: 142 NDDVVKSTLVDMYAKF 157
V L+ M K
Sbjct: 446 EHYVYMVKLMGMAGKL 461
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 238/496 (47%), Gaps = 75/496 (15%)
Query: 60 ALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
A LFD LP RDL S S LS+ + P+ L++ + F+ ++ AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 120 MGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG-LPDYGRAVFDSISSLNSISW 178
+ + G+QVHA + + K+ L+DMY+K+G L D R VF+S+ + +SW
Sbjct: 97 LS--YPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVR-VFESVEEKDLVSW 153
Query: 179 TAMISGYARSGRRSEAL----RLFRESPYKNLFAWTALIS-------------------- 214
A++SG+ R+G+ EAL ++RE + F ++++
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 215 ---GLVQSGNGVDAFYTFVKMRQEGITIADPL---------------------------- 243
LV G + +FY+ V + E + + + L
Sbjct: 214 TGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 244 ---------VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLV 294
VLSS + C++ + +GKQ+H + + G+ S + N L+DMY KC +V
Sbjct: 274 MSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIV 333
Query: 295 AAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV--SARVKPNEVTFVGLIYA 352
A+ IF + K VVSWTS+I A +G +AL ++ +M + V PN VTF+ +I A
Sbjct: 334 QARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISA 393
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDE- 411
C++ GLV +G+ F M E Y + P +HY C +D+ S++G +E L+ M + ++
Sbjct: 394 CAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQS 453
Query: 412 ---PTWAALLSACKHHGNTQMAVRIADKLL-CLKPEDPSSYILLSNVYAGASMWENVSKV 467
W A+LSAC + + +A +L+ PE+ S Y+L+SN YA W+ V ++
Sbjct: 454 IPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEEL 513
Query: 468 RKLMMVKEVKKEPGYS 483
R + K + K G+S
Sbjct: 514 RGKLKNKGLVKTAGHS 529
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 15/307 (4%)
Query: 153 MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTAL 212
M+A + + R ++ S N + I +A + A LF E P ++L + +
Sbjct: 1 MFACLRIGRFIRLGNVTVKSTNLVLRCVFIRNFA-----THADHLFDELPQRDLSSLNSQ 55
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
+S ++SGN D F+++ + ++ + V+GAC+ L+ E G+QVH L+I G
Sbjct: 56 LSSHLRSGNPNDTLALFLQIHRASPDLSSH-TFTPVLGACSLLSYPETGRQVHALMIKQG 114
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
E+ AL+DMY+K LV + +F + KD+VSW +++ G ++G+ +EAL ++
Sbjct: 115 AETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFA 174
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
M RV+ +E T ++ C+++ ++ +G+ + +MV G + + T ++ +S
Sbjct: 175 AMYRERVEISEFTLSSVVKTCASLKILQQGKQV-HAMVVVTG-RDLVVLGTAMISFYSSV 232
Query: 393 GHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLS 452
G ++EA + ++ V DE +L+S C + N + A L + + P+ +L S
Sbjct: 233 GLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA------FLLMSRQRPNVRVLSS 286
Query: 453 NVYAGAS 459
++ AG S
Sbjct: 287 SL-AGCS 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 46/262 (17%)
Query: 14 LSSVARQSPFLT-----KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP 68
LSSV + L K++HA ++ +G ++ Y GL+ +A++++++L
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 69 -HRDLVSWASVLSAC-NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVN 126
H D V S++S C N L +SR +P+ V S+ + C++ L +
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ------RPNVRVLSSSLAGCSDNSDLWI- 299
Query: 127 QGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYA 186
GKQ+H L + + +D + + L+DMY K G R +F +I S + +SWT+MI YA
Sbjct: 300 -GKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA 358
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
+G +AL +FRE + + G+GV + + +
Sbjct: 359 VNGDGVKALEIFRE---------------MCEEGSGV---------------LPNSVTFL 388
Query: 247 SVVGACANLAVWELGKQVHGLV 268
V+ ACA+ + + GK+ G++
Sbjct: 389 VVISACAHAGLVKEGKECFGMM 410
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 10 LKSQLSSVARQSP-FLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP 68
L S L+ + S ++ K++H +++G N L+D YGKCG + A +F +P
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Query: 69 HRDLVSWASVLSACNLANLPHRALSISRSLLHQ--GFQPDHFVFSTLIKACANMGPLHVN 126
+ +VSW S++ A + +AL I R + + G P+ F +I ACA+ G V
Sbjct: 344 SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL--VK 401
Query: 127 QGKQ 130
+GK+
Sbjct: 402 EGKE 405
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 197/406 (48%), Gaps = 31/406 (7%)
Query: 216 LVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYES 275
L GN +A + +G + D + L + C E + VH +I L
Sbjct: 94 LCIQGNWREAVEVLDYLENKGYAM-DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPC 152
Query: 276 CVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMV 335
V NA+++MY+ C + A +F EM + + ++ +G EEA+ L+
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 336 SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHL 395
KPN F + C+ G V +G F++M +YGI PS++HY + + + SGHL
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 396 DEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD---KLLCLKPEDPSSYILLS 452
DEA N + MP+ P W L++ + HG+ ++ R A+ KL + + SS L++
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGLVA 332
Query: 453 NVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAG----ETSHPMKDEIL 508
+K VKKEP + FY+ ++SHP + I
Sbjct: 333 ------------TKASDF-----VKKEPS------TRSEPYFYSTFRPVDSSHPQMNIIY 369
Query: 509 GLMRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIV 568
+ L +++++ GYVPDT Y + E + Q+F + E +AV LLK+ P + I ++
Sbjct: 370 ETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLL 429
Query: 569 KNLRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
N+R+ GDCH ++KL+S I R++ RDAK YH FK+G C CN+ W
Sbjct: 430 TNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 229/465 (49%), Gaps = 40/465 (8%)
Query: 26 KKLHAQIIKSGLSQHEPF-PNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNL 84
K+LH+ ++KSG + F N L+D Y CG L +++ F+ +P +D++SW S++S C
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 85 ANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDD 144
+L + + G +P F + + C+ + GKQ+H + L +
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD--IQSGKQIHCYVLKMGFDVSS 350
Query: 145 V-VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ V+S L+DMY K N I +A+ L++ P
Sbjct: 351 LHVQSALIDMYGK----------------CNGIENSAL---------------LYQSLPC 379
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWEL--- 260
NL +L++ L+ G D F M EG I D + LS+V+ A +L++ E
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI-DEVTLSTVLKA-LSLSLPESLHS 437
Query: 261 GKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQ 320
VH I GY + V +S +L+D Y K ++ +F E+ ++ TSII G A+
Sbjct: 438 CTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYAR 497
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
+G + + + +M + P+EVT + ++ CS+ GLV +G +F S+ YGI P +
Sbjct: 498 NGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRK 557
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCL 440
Y C++DL R+G +++AE L+ D W++LL +C+ H N + R A+ L+ L
Sbjct: 558 LYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNL 617
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCI 485
+PE+ + YI +S Y +E ++R++ +E+ +E GYS +
Sbjct: 618 EPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 172/385 (44%), Gaps = 36/385 (9%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
N +D K G L A + FD + RD+V++ ++S + RA+ + ++ G +
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
F +++ C++ L +G QVH + + + V+S LV +YA L D
Sbjct: 110 ESASTFPSVLSVCSD--ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV-- 165
Query: 165 AVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD 224
AL+LF E +NL L+ Q+G
Sbjct: 166 -----------------------------ALKLFDEMLDRNLAVCNLLLRCFCQTGESKR 196
Query: 225 AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYE-SCVFISNAL 283
F +++M EG+ + L ++ C++ + GKQ+H LV+ G+ S +F++N L
Sbjct: 197 LFEVYLRMELEGVA-KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVL 255
Query: 284 VDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
VD Y+ C DL + F + KDV+SW SI+ A +G ++L L+ M +P+
Sbjct: 256 VDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSI 315
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
F+ + CS + G+ + +++ SL + L+D++ + ++ + L +
Sbjct: 316 RPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQ 375
Query: 404 TMPVSPDEPTWAALLSACKHHGNTQ 428
++P E +L+++ H G T+
Sbjct: 376 SLPCLNLE-CCNSLMTSLMHCGITK 399
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 187 RSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
+SG A F E +++ + LISG + G + A + +M G+
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR-ESASTFP 116
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLV-AAKYIFCEMSR 305
SV+ C++ G QVH VI LG+ +F+ +ALV +YA C LV A +F EM
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLD 175
Query: 306 KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
+++ ++ Q G+++ +Y M V N +T+ +I CS+ LV +G+ L
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHG 425
+V+ ++ L+D +S G L + +P D +W +++S C +G
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYG 294
Query: 426 NTQMAVRIADKL 437
+ ++ + K+
Sbjct: 295 SVLDSLDLFSKM 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS 336
V+ N +D K +L++A F EMS +DVV++ +I G +++G + A+ LY +MVS
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 337 ARVKPNEVTFVGLIYACSN 355
++ + TF ++ CS+
Sbjct: 106 CGLRESASTFPSVLSVCSD 124
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 230/492 (46%), Gaps = 74/492 (15%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANL 87
+H ++ GL +L+ Y KCG L+ A QLF + RD+VSW++++++ A
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFL----------- 136
A+S+ R ++ +P+ +++++ CA + + GK +H + +
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL--GKSIHCYAIKADIESELETA 439
Query: 137 ---LSPYAN-----------------DDVVKSTLVDMYAKFGLPDYGRAVF--------- 167
+S YA D V + L Y + G + V+
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 168 -DSISSLNSISWTAMISGYARS----------GRRSE-------------------ALRL 197
DS + + + A S YAR G SE A+ L
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 198 FRESPY-KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA 256
F + + K+ +W +++G + G +A TF +M+ E + + ++V A A L+
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ-PNAVTFVNIVRAAAELS 618
Query: 257 VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIV 316
+G VH +I G+ S + N+LVDMYAKC + +++ F E+S K +VSW +++
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK 376
A HG A A++L+ M +KP+ V+F+ ++ AC + GLV +G+ +F M E + I+
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 377 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADK 436
++HY C++DL ++G EA ++R M V W ALL++ + H N ++ +
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQ 798
Query: 437 LLCLKPEDPSSY 448
L+ L+P +PS Y
Sbjct: 799 LVKLEPLNPSHY 810
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 195/409 (47%), Gaps = 45/409 (11%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H +I SGL H N L++AY + +FD++ +V W S++ A
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 87 LPHRALSISRSLLHQ-GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
L AL + + G PD + F+ +KACA G + +G ++H +D
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACA--GSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ + LV+MY K R VFD + + ++W M+SG A++G S AL LF +
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD----- 191
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
MR + I D + L +++ A + L ++ + +H
Sbjct: 192 --------------------------MRSCCVDI-DHVSLYNLIPAVSKLEKSDVCRCLH 224
Query: 266 GLVIGLGYESCVF-ISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQA 324
GLVI G+ +F S+ L+DMY C+DL AA+ +F E+ RKD SW +++ A +G
Sbjct: 225 GLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFF 281
Query: 325 EEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTC 384
EE L L+D M + V+ N+V + A + VG + KG A+ V+ G+ + T
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ-GLIGDVSVATS 340
Query: 385 LLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
L+ ++S+ G L+ AE L + D +W+A++++ + G A+ +
Sbjct: 341 LMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIASYEQAGQHDEAISL 388
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 44/323 (13%)
Query: 113 LIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS 172
+++ C N L QVH ++S + L++ Y+ F D R +FDS+
Sbjct: 11 MLRECKNFRCL-----LQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSVRD 61
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKM 232
+ W +MI GY R+G EAL F G + G+D
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFF----------------GYMSEEKGID-------- 97
Query: 233 RQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSD 292
D + + ACA ++ G ++H L+ +G ES V+I ALV+MY K D
Sbjct: 98 -------PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARD 150
Query: 293 LVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA 352
LV+A+ +F +M KDVV+W +++ G AQ+G + AL L+ DM S V + V+ LI A
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 353 CSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEP 412
S + R L +++ I + L+D++ L AE++ + DE
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFI---FAFSSGLIDMYCNCADLYAAESVFEEVW-RKDES 266
Query: 413 TWAALLSACKHHGNTQMAVRIAD 435
+W +++A H+G + + + D
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFD 289
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 170/410 (41%), Gaps = 44/410 (10%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++H I + GL L++ Y K L A Q+FD + +D+V+W +++S
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQ---GKQVHAHFLLSPYAND 143
AL + + DH LI A + + V + G + F+ +
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA----- 235
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
S L+DMY +VF+ + + SW M++ YA +G E L LF
Sbjct: 236 --FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF----- 288
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
D + +R + A L ++ VG G
Sbjct: 289 --------------------DLMRNY-DVRMNKVAAASALQAAAYVGDLVK------GIA 321
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H + G V ++ +L+ MY+KC +L A+ +F + +DVVSW+++I Q GQ
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+EA++L+ DM+ +KPN VT ++ C+ V G+++ ++ I+ L+ T
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETAT 440
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
++ ++++ G A +P+ D + AL G+ A +
Sbjct: 441 AVISMYAKCGRFSPALKAFERLPI-KDAVAFNALAQGYTQIGDANKAFDV 489
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 190/437 (43%), Gaps = 38/437 (8%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
+ + LH +IK G F + L+D Y C L A +F+ + +D SW ++++A
Sbjct: 219 VCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAA-- 274
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
H GF F +++ M V K A L +
Sbjct: 275 --------------YAHNGF------FEEVLELFDLMRNYDVRMNKVAAASALQAAAYVG 314
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
D+VK G+ + AV + S++ T+++S Y++ G A +LF
Sbjct: 315 DLVK----------GIAIHDYAVQQGLIGDVSVA-TSLMSMYSKCGELEIAEQLFINIED 363
Query: 204 KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQ 263
+++ +W+A+I+ Q+G +A F M + I + + L+SV+ CA +A LGK
Sbjct: 364 RDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK-PNAVTLTSVLQGCAGVAASRLGKS 422
Query: 264 VHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQ 323
+H I ES + + A++ MYAKC A F + KD V++ ++ G Q G
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
A +A +Y +M V P+ T VG++ C+ ++G ++ +++ +G
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAH 541
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE 443
L+++F++ L A L +W +++ HG + AV ++ K +
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ 601
Query: 444 DPSSYILLSNVYAGASM 460
P++ ++ V A A +
Sbjct: 602 -PNAVTFVNIVRAAAEL 617
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 25/381 (6%)
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
I D L + C + E + VH + L S + +++MY+ C A
Sbjct: 109 IVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS----YHTVIEMYSGCRSTDDALN 164
Query: 299 IFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+F EM +++ +W ++I A++G+ E A+ ++ + KP++ F + +AC ++G
Sbjct: 165 VFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGD 224
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALL 418
+++G F SM DYG+ S++ Y ++++ + GHLDEA + + M V P W L+
Sbjct: 225 INEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
Query: 419 SACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSN-----VYAGASMWENVSKVRKLMMV 473
+ C G ++ R A+ +K D S SN A S E + ++R M+
Sbjct: 285 NLCWVQGYLELGDRFAE---LIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMI 341
Query: 474 KEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSYVLHD 533
++ D K H F AG+TSH + R L +M G+VP T
Sbjct: 342 RD----------DPKKRMHEFRAGDTSHL---GTVSAFRSLKVQMLDIGFVPATRVCFVT 388
Query: 534 MDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKNLRVCGDCHTVLKLISTIESREIY 593
++++EKE QL + S +LA A+ ++ + + +++N+R C D H K+IS I R +
Sbjct: 389 VEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALI 448
Query: 594 VRDAKRYHHFKDGKCSCNDFW 614
RD K+YH +K+G CSC D+W
Sbjct: 449 QRDKKKYHFYKNGVCSCKDYW 469
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 193/382 (50%), Gaps = 41/382 (10%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNT-LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC 82
L K++HA ++KS +PF ++ L+D Y KCG + ++F R+ +SW +++S
Sbjct: 334 LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+AL + +GF+PD +T++ CA + + QGK++H + L + +
Sbjct: 394 AANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRA--IKQGKEIHCYALKNLFLP 451
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
+ + ++L+ MY+K G+P+Y +RLF
Sbjct: 452 NVSLVTSLMVMYSKCGVPEY-------------------------------PIRLFDRLE 480
Query: 203 YKNLFAWTALISGLVQSGN---GVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
+N+ AWTA+I V++ + G++ F + + D + + V+ C++L +
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHR----PDSVTMGRVLTVCSDLKALK 536
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTA 319
LGK++HG ++ +ES F+S ++ MY KC DL +A + F ++ K ++WT+II
Sbjct: 537 LGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG 596
Query: 320 QHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSL 379
+ +A+ ++ MVS PN TF ++ CS G V + F M+ Y ++PS
Sbjct: 597 CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 380 QHYTCLLDLFSRSGHLDEAENL 401
+HY+ +++L +R G ++EA+ L
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 160/347 (46%), Gaps = 42/347 (12%)
Query: 91 ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
AL+I L +G + FS L++AC L GKQVH H ++ +++ +++ L
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLL--HGKQVHVHIRINGLESNEFLRTKL 152
Query: 151 VDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT 210
V MY G + VFD ES N+++W
Sbjct: 153 VHMYTACGSVKDAQKVFD-------------------------------ESTSSNVYSWN 181
Query: 211 ALISGLVQSGNG--VDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLV 268
AL+ G V SG D TF +MR+ G+ + + LS+V + A + G + H L
Sbjct: 182 ALLRGTVISGKKRYQDVLSTFTEMRELGVDL-NVYSLSNVFKSFAGASALRQGLKTHALA 240
Query: 269 IGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEAL 328
I G + VF+ +LVDMY KC + A+ +F E+ +D+V W ++I G A + + EAL
Sbjct: 241 IKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEAL 300
Query: 329 ALYDDMVS-ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMV--EDYGIKPSLQHYTCL 385
L+ M+S ++ PN V ++ +V + G+ + ++ ++Y +P + ++ L
Sbjct: 301 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV--HSGL 358
Query: 386 LDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
+DL+ + G + + + +W AL+S +G A+R
Sbjct: 359 IDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFDQALR 404
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 176/380 (46%), Gaps = 37/380 (9%)
Query: 17 VARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWA 76
V R+S K++H I +GL +E L+ Y CG ++DA ++FD ++ SW
Sbjct: 122 VRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWN 181
Query: 77 SVLSACNLANLP--HRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAH 134
++L ++ LS + G + + S + K+ A L QG + HA
Sbjct: 182 ALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALR--QGLKTHAL 239
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEA 194
+ + N +K++LVDMY K G G AR
Sbjct: 240 AIKNGLFNSVFLKTSLVDMYFKCGK-----------------------VGLAR------- 269
Query: 195 LRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
R+F E +++ W A+I+GL + +A F M E + ++L++++ +
Sbjct: 270 -RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGD 328
Query: 255 LAVWELGKQVHGLVI-GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTS 313
+ +LGK+VH V+ Y F+ + L+D+Y KC D+ + + +F +++ +SWT+
Sbjct: 329 VKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTA 388
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDY 373
++ G A +G+ ++AL M +P+ VT ++ C+ + + +G+ + +++
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 374 GIKPSLQHYTCLLDLFSRSG 393
+ P++ T L+ ++S+ G
Sbjct: 449 FL-PNVSLVTSLMVMYSKCG 467
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
+ Q GI + + S+++ AC GKQVH + G ES F+ LV MY C
Sbjct: 102 LEQRGIPV-NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACG 160
Query: 292 DLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
+ A+ +F E + +V SW +++ GT G+ Y D++S + E+ +Y
Sbjct: 161 SVKDAQKVFDESTSSNVYSWNALLRGTVISGKKR-----YQDVLSTFTEMRELGVDLNVY 215
Query: 352 ACSNVGLVSKGRALFRSMVEDY------GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
+ SNV G + R ++ + G+ S+ T L+D++ + G + A + +
Sbjct: 216 SLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI 275
Query: 406 PVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLS 452
V D W A+++ H+ A+ + ++ + P+S IL +
Sbjct: 276 -VERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 212/425 (49%), Gaps = 38/425 (8%)
Query: 14 LSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDL 72
L+ +R++ F L +++H ++K G+ + ++L+ Y +CG L AL+ FD + +D+
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 73 VSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVH 132
+SW +V+SAC+ +A+ + +L+ F P+ F +++KAC+ L G+QVH
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF--GRQVH 307
Query: 133 AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRS 192
+ + D V ++L+DMYAK G S
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAK-------------------------------CGEIS 336
Query: 193 EALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
+ ++F +N WT++I+ + G G +A F M++ + IA+ L + S++ AC
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL-IANNLTVVSILRAC 395
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWT 312
++ LGK++H +I E V+I + LV +Y KC + A + ++ +DVVSWT
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT 455
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
++I G + G EAL +M+ V+PN T+ + AC+N + GR++ ++
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVR 432
+ + + L+ ++++ G + EA + +MP + +W A++ +G + A++
Sbjct: 516 HALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALK 573
Query: 433 IADKL 437
+ ++
Sbjct: 574 LMYRM 578
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 210/427 (49%), Gaps = 39/427 (9%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACN 83
L K++HA +K Q F N L+ + + G L A ++FD++P ++ V+W +++
Sbjct: 100 LIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYL 159
Query: 84 LANLPHRALSISRSLLHQGFQ-PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
L A ++ + G + + +F L+ C+ + G+QVH + +
Sbjct: 160 KYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL--GRQVHGNMV------ 211
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESP 202
K G+ N I ++++ YA+ G + ALR F
Sbjct: 212 -------------KVGVG-------------NLIVESSLVYFYAQCGELTSALRAFDMME 245
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
K++ +WTA+IS + G+G+ A F+ M + + + S++ AC+ G+
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF-LPNEFTVCSILKACSEEKALRFGR 304
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHG 322
QVH LV+ ++ VF+ +L+DMYAKC ++ + +F MS ++ V+WTSII A+ G
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 323 QAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
EEA++L+ M + N +T V ++ AC +VG + G+ L ++++ I+ ++
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIG 423
Query: 383 TCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
+ L+ L+ + G +A N+++ +P S D +W A++S C G+ A+ +++
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV 482
Query: 443 E-DPSSY 448
E +P +Y
Sbjct: 483 EPNPFTY 489
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 164/333 (49%), Gaps = 34/333 (10%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
+++H+ ++K + +L+D Y KCG + D ++FD + +R+ V+W S+++A
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
A+S+ R + + ++ ++++AC ++G L + GK++HA + + +
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL--GKELHAQIIKNSIEKNVY 421
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN 205
+ STLV +Y K G +A + ++ P ++
Sbjct: 422 IGSTLVWLYCK-------------------------------CGESRDAFNVLQQLPSRD 450
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+ +WTA+ISG G+ +A +M QEG+ +P SS + ACAN +G+ +H
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVE-PNPFTYSSALKACANSESLLIGRSIH 509
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAE 325
+ S VF+ +AL+ MYAKC + A +F M K++VSW ++I+G A++G
Sbjct: 510 SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCR 569
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
EAL L M + + ++ F ++ C ++ L
Sbjct: 570 EALKLMYRMEAEGFEVDDYIFATILSTCGDIEL 602
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 6 HAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
++ ALK+ +S +S + + +H+ K+ + + L+ Y KCG + +A ++FD
Sbjct: 489 YSSALKACANS---ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 66 TLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
++P ++LVSW +++ AL + + +GF+ D ++F+T++ C ++
Sbjct: 546 SMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 36/354 (10%)
Query: 47 LLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPD 106
++ + K L++A + FD +P + +VSW ++LS AL + +L G +P+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 107 HFVFSTLIKACANMGPLHVNQG-------KQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
+ +I AC+ + + K+V + VK+ L+DM+AK
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCF---------VKTALLDMHAKCRD 314
Query: 160 PDYGRAVFDSI-SSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQ 218
R +F+ + + N ++W AMISGY R G S A +LF P +N+ +W +LI+G
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 219 SGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLV----IGL--- 271
+G A F M G + D + + SV+ AC ++A ELG + + I L
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDS 434
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALY 331
GY S +F MYA+ +L AK +F EM +DVVS+ ++ A +G E L L
Sbjct: 435 GYRSLIF-------MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 332 DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
M ++P+ VT+ ++ AC+ GL+ +G+ +F+S+ P HY C+
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 189/469 (40%), Gaps = 107/469 (22%)
Query: 63 LFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP 122
+FD++ ++ S+ + ++ + L + G PD F F +IK+ G
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 123 LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL--------- 173
L Q F PY V++ ++DMY K + R VFD IS
Sbjct: 122 LF--QALVEKLGFFKDPY-----VRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMI 174
Query: 174 ----------------------NSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTA 211
+ +SWT MI+G+A+ A + F P K++ +W A
Sbjct: 175 SGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
++SG Q+G DA F M + G+ + V+ AC+ A L + + L+
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVR-PNETTWVIVISACSFRADPSLTRSLVKLIDEK 293
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCE----------------------------- 302
F+ AL+DM+AKC D+ +A+ IF E
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 303 ---MSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS-ARVKPNEVTFVGLIYACSNVGL 358
M +++VVSW S+I G A +GQA A+ ++DM+ KP+EVT + ++ AC ++
Sbjct: 354 FDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMAD 413
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAE------------------- 399
+ G + + IK + Y L+ +++R G+L EA+
Sbjct: 414 LELGDCIV-DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFT 472
Query: 400 ------------NLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVRI 433
NL+ M + PD T+ ++L+AC G + RI
Sbjct: 473 AFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 47/251 (18%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQG-F 103
N ++ Y + G + A QLFDT+P R++VSW S+++ A+ ++ G
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 394
Query: 104 QPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG 163
+PD +++ AC +M L + +VD K +
Sbjct: 395 KPDEVTMISVLSACGHMADLELGD---------------------CIVDYIRKNQI---- 429
Query: 164 RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGV 223
LN + ++I YAR G EA R+F E +++ ++ L + +G+GV
Sbjct: 430 --------KLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGV 481
Query: 224 DAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNAL 283
+ KM+ EGI D + +SV+ AC + + G+++ ++S I N L
Sbjct: 482 ETLNLLSKMKDEGIE-PDRVTYTSVLTACNRAGLLKEGQRI--------FKS---IRNPL 529
Query: 284 VDMYAKCSDLV 294
D YA C DL+
Sbjct: 530 ADHYA-CMDLL 539
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 83/104 (79%)
Query: 511 MRKLDAEMRKRGYVPDTSYVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTIIRIVKN 570
++ L E+R GYVP+T YVLHD+D++ KE+ L HSERLA+A+G++ PGT IR++KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 571 LRVCGDCHTVLKLISTIESREIYVRDAKRYHHFKDGKCSCNDFW 614
LR+CGDCH +K++S+IE REI VRD KR+HHF+DG CSC D+W
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 59/395 (14%)
Query: 46 TLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLANLP-HRALSISRSLLH 100
+L+ A+ G ++A+ +F + L+++ +L+ P ++ S+ +
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
G PD + ++TLI C G LH + QV + ++ D V + L+D+Y K P
Sbjct: 273 DGIAPDAYTYNTLI-TCCKRGSLH-QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 161 DYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTAL 212
V + + S + +++ ++IS YAR G EA+ L + K ++F +T L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
+SG ++G A F +MR G P +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAG---CKPNI---------------------------- 419
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMS----RKDVVSWTSIIVGTAQHGQAEEAL 328
C F NA + MY IF E++ D+V+W +++ Q+G E
Sbjct: 420 ---CTF--NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 329 ALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDL 388
++ +M A P TF LI A S G + ++R M+ D G+ P L Y +L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAA 533
Query: 389 FSRSGHLDEAENLIRTMP---VSPDEPTWAALLSA 420
+R G +++E ++ M P+E T+ +LL A
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 183/419 (43%), Gaps = 35/419 (8%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
K+ +++ +G S N+L+ AY + G+L +A++L + + + D+ ++ ++LS
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
A A+SI + + G +P+ F+ IK N G + ++ + +
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF--TEMMKIFDEINVCGLSP 452
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI----SWTAMISGYARSGRRSEALRLF 198
D V +TL+ ++ + G+ VF + + ++ +IS Y+R G +A+ ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 199 RE------SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
R +P +L + +++ L + G + +M ++G + L S++ A
Sbjct: 513 RRMLDAGVTP--DLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAY 569
Query: 253 ANLA----VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK-- 306
AN + L ++V+ VI E + LV + +KC L A+ F E+ +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVI----EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 307 --DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRA 364
D+ + S++ + +A + D M P+ T+ L+Y S K
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 365 LFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL---IRTMPVSPDEPTWAALLSA 420
+ R ++ GIKP + Y ++ + R+ + +A + +R + PD T+ + +
Sbjct: 686 ILREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 165/378 (43%), Gaps = 22/378 (5%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSACNLANLPHRALSISRSLLH 100
N + YG G + +++FD + D+V+W ++L+ + + + +
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
GF P+ F+TLI A + G Q V+ L + D +T++ A+ G+
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFE--QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 161 DYGRAVF----DSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWTA-LISG 215
+ V D N +++ +++ YA +G+ + E Y + A L+
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 216 LVQSGNGVD----AFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
LV + D A F ++++ G + D L+S+V + V +
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFS-PDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEA 327
G+ + N+L+ M+++ +D ++ I E+ K D++S+ ++I ++ + +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
++ +M ++ + P+ +T+ I + + + + + R M++ +G +P+ Y ++D
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVD 777
Query: 388 LFSRSGHLDEAENLIRTM 405
+ + DEA+ + +
Sbjct: 778 GYCKLNRKDEAKLFVEDL 795
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 163/351 (46%), Gaps = 19/351 (5%)
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
G++PD FSTL+ G V++ + + D V STL++ G
Sbjct: 135 GYEPDTITFSTLVNGFCLEG--RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 162 YGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYKNLFA----WTALI 213
+ D + + +++ +++ +SG + AL LFR+ +N+ A ++ +I
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 214 SGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGY 273
L + G+ DA F +M +GI AD + SS++G N W+ G ++ +IG
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIK-ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 274 ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALA 329
V +AL+D++ K L+ AK ++ EM + D +++ S+I G + EA
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 330 LYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
++D MVS +P+ VT+ LI + V G LFR + G+ P+ Y L+ F
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE-ISSKGLIPNTITYNTLVLGF 430
Query: 390 SRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+SG L+ A+ L + M V P T+ LL +G A+ I +K+
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 192/441 (43%), Gaps = 64/441 (14%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLH 100
+TL++ + G + +A+ L D + DLV+ +++++ L AL + ++
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 101 QGFQPDHFVFSTLIKACANMG--PLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG 158
GFQPD + ++ G L ++ +++ + + V S ++D K G
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASV----VQYSIVIDSLCKDG 259
Query: 159 LPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF----AWT 210
D ++F+ + + ++++++I G G+ + ++ RE +N+ ++
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV-GACANLAVWELGKQVHGLVI 269
ALI V+ G ++A + +M GI D + +S++ G C + E Q+ L++
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIA-PDTITYNSLIDGFCKENCLHE-ANQMFDLMV 377
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAE 325
G E + + L++ Y K + +F E+S K + +++ ++++G Q G+
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM---------------- 369
A L+ +MVS V P+ VT+ L+ + G ++K +F M
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 370 ------------------VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VS 408
+ D G+KP + Y ++ + G L EA+ L R M +
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 409 PDEPTWAALLSACKHHGNTQM 429
PD+ T+ L+ A H G + +
Sbjct: 558 PDDFTYNILIRA--HLGGSGL 576
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 271 LGYESCVFISNALVDMY---AKCSDLVAAKYIFCEM-SRKDVVSWTSIIVGTAQHGQAEE 326
LGYE + LV+ + + S+ VA EM R D+V+ +++I G G+ E
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLL 386
AL L D MV +P+EVT+ ++ G + LFR M E+ IK S+ Y+ ++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVI 252
Query: 387 DLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHHG 425
D + G D+A +L M + D T+++L+ + G
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 101/228 (44%), Gaps = 14/228 (6%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA 81
K+L+ ++I G++ N+L+D + K L +A Q+FD + + D+V+++ ++++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
A + + R + +G P+ ++TL+ G L N K++ +
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL--NAAKELFQEMVSRGVP 452
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALRL 197
V L+D G + +F+ + +L + +I G + + +A L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 198 FRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIAD 241
F K ++ + +I GL + G+ +A F KM+++G T D
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 141/328 (42%), Gaps = 46/328 (14%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSAC-NLA 85
+L I+KS + F N LL + CG L Q+FD +PHRD SWA V C +
Sbjct: 109 ELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 86 NLPHRALSISRSLLHQ---GFQPDHFVFSTLIKACANMGPLHVNQGKQVHA--HFLLSPY 140
+ A L H F+ ++ ++KACA + + GKQVHA H L
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFEL--GKQVHALCHKLGFID 226
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE 200
D + +L+ Y +F + V +S+ N+++W A ++ R G E +R
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIR---- 282
Query: 201 SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA-VWE 259
F++M GI + V S+V+ AC+ ++
Sbjct: 283 ---------------------------DFIEMGNHGIK-KNVSVFSNVLKACSWVSDGGR 314
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS---WTSIIV 316
G+QVH I LG+ES I L++MY K + A+ +F S KD S W +++
Sbjct: 315 SGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVF--KSSKDETSVSCWNAMVA 372
Query: 317 GTAQHGQAEEALALYDDMVSARVKPNEV 344
Q+G EA+ L M + +K ++
Sbjct: 373 SYMQNGIYIEAIKLLYQMKATGIKAHDT 400
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 117/250 (46%), Gaps = 5/250 (2%)
Query: 189 GRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKM---RQEGITIADPLVL 245
GR ++F P+++ +W + G ++ G+ DA + FV M Q+G +L
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWIL 196
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGY--ESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
V+ ACA + +ELGKQVH L LG+ E ++S +L+ Y + L A + ++
Sbjct: 197 GCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQL 256
Query: 304 SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR 363
S + V+W + + + G+ +E + + +M + +K N F ++ ACS V +
Sbjct: 257 SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSG 316
Query: 364 ALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVSPDEPTWAALLSACKH 423
+ G + L++++ + G + +AE + ++ W A++++
Sbjct: 317 QQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ 376
Query: 424 HGNTQMAVRI 433
+G A+++
Sbjct: 377 NGIYIEAIKL 386
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 4/194 (2%)
Query: 24 LTKKLHAQIIKSGLSQHEP--FPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA 81
L K++HA K G E +L+ YG+ L+DA + L + + V+WA+ ++
Sbjct: 211 LGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTN 270
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ + + G + + VFS ++KAC+ + G+QVHA+ + +
Sbjct: 271 DYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSD-GGRSGQQVHANAIKLGFE 329
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSIS-WTAMISGYARSGRRSEALRLFRE 200
+D +++ L++MY K+G VF S S+S W AM++ Y ++G EA++L +
Sbjct: 330 SDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQ 389
Query: 201 SPYKNLFAWTALIS 214
+ A L++
Sbjct: 390 MKATGIKAHDTLLN 403
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 176/368 (47%), Gaps = 19/368 (5%)
Query: 47 LLDAYGKCGLLQDALQLFDTL----PHRDLVSWASVLSACNLANLPHRALSISRSLLHQG 102
++ G+ G + A ++F+T + ++++++SA + L A+S+ S+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 103 FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
+P+ ++ +I AC G + Q + + D + ++L+ + ++ GL +
Sbjct: 299 LRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 163 GRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTALIS 214
R +FD +++ + S+ ++ + G+ A + + P K N+ +++ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYE 274
G ++G +A F +MR GI + D + ++++ + E + + +G +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIAL-DRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 275 SCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALAL 330
V NAL+ Y K K +F EM R+ ++++++++I G ++ G +EA+ +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFS 390
+ + SA ++ + V + LI A GLV +L M ++ GI P++ Y ++D F
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFG 595
Query: 391 RSGHLDEA 398
RS +D +
Sbjct: 596 RSATMDRS 603
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 16/301 (5%)
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSL---NSI-SWTAMISGYARSGRRSEALRLFRESP- 202
S ++ ++G + +F++ + N++ +++A+IS Y RSG EA+ +F
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 203 ---YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
NL + A+I + G F Q D + +S++ C+ +WE
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSII 315
+ + + E VF N L+D K + A I +M K +VVS++++I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G A+ G+ +EAL L+ +M + + V++ L+ + VG + + R M GI
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA-SVGI 475
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVR 432
K + Y LL + + G DE + + M V P+ T++ L+ G + A+
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 433 I 433
I
Sbjct: 536 I 536
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 149/373 (39%), Gaps = 56/373 (15%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
K ++ ++G+ N+LL + GL + A LFD + +R D+ S+ ++L A
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
A I + + P+ +ST+I A G ++ + A
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG--RFDEALNLFGEMRYLGIAL 442
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLF 198
D V +TL+ +Y K G + + ++S+ + +++ A++ GY + G+ E ++F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 199 ----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGI--------TIADPLVLS 246
RE NL ++ LI G + G +A F + + G+ + D L +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL------------- 293
+VG+ +L + E+ K+ G V N+++D + + + +
Sbjct: 563 GLVGSAVSL-IDEMTKE--------GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLP 613
Query: 294 --VAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEA----------LALYDDMVSARVKP 341
+A E V+ + + + ++ L ++ M +KP
Sbjct: 614 FSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKP 673
Query: 342 NEVTFVGLIYACS 354
N VTF ++ ACS
Sbjct: 674 NVVTFSAILNACS 686
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 279 ISNALVDMYAKCSDLVAAKYIF----CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDM 334
+++A++ + + AK IF V +++++I + G EEA+++++ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 335 VSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGH 394
++PN VT+ +I AC G+ K A F ++ G++P + LL + SR G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 395 LDEAENLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVRI 433
+ A NL M + D ++ LL A G +A I
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 226/540 (41%), Gaps = 82/540 (15%)
Query: 14 LSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP---- 68
LS++A+ + F L L Q+ G+S + + L++ + + L AL + +
Sbjct: 88 LSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGY 147
Query: 69 HRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
D+V+ S+L+ N A+S+ ++ G+QPD F F+TLI G N+
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH-----GLFRHNRA 202
Query: 129 KQVHAHFLLSPYANDDVVKSTLVD-MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
+ A LVD M K PD +++ +++G +
Sbjct: 203 SEAVA----------------LVDRMVVKGCQPDL-------------VTYGIVVNGLCK 233
Query: 188 SGRRSEALRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
G AL L ++ + + +I L N DA F +M +GI + +
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR-PNVV 292
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
+S++ N W ++ +I V +AL+D + K LV A+ ++ EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 304 SRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
++ D+ +++S+I G H + +EA +++ M+S PN VT+ LI V
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAA 416
+G LFR M + G+ + YT L+ F ++ D A+ + + M V PD T++
Sbjct: 413 DEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 417 LLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEV 476
LL ++G + A+ + + L K E ++Y M E M K
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKME--------PDIYTYNIMIEG--------MCKAG 515
Query: 477 KKEPGYS-----CIDLGKESHVFY----AGETSHPMKDEILGLMRKLDAEMRKRGYVPDT 527
K E G+ + K + V Y +G +K+E L R EM++ G +PD+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR----EMKEEGPLPDS 571
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 55/396 (13%)
Query: 24 LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVL 79
L KK+ I+ G+ + NT++DA + DAL LF + ++ ++V++ S++
Sbjct: 243 LLKKMEQGKIEPGVVIY----NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 80 SA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLS 138
CN + +S ++ + P+ FS LI A G L + ++++ +
Sbjct: 299 RCLCNYGRWSDASRLLS-DMIERKINPNVVTFSALIDAFVKEGKLV--EAEKLYDEMIKR 355
Query: 139 PYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEA 194
D S+L++ + D + +F+ + S N +++ +I G+ ++ R E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 195 LRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV- 249
+ LFRE + N +T LI G Q+ +A F +M +G+ + D + S ++
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV-LPDIMTYSILLD 474
Query: 250 GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV 309
G C N V + LV +Y+ D+
Sbjct: 475 GLCNNGKVE--------------------------------TALVVFEYLQRSKMEPDIY 502
Query: 310 SWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSM 369
++ +I G + G+ E+ L+ + VKPN VT+ ++ GL + ALFR M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 370 VEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
E+ G P Y L+ R G + LIR M
Sbjct: 563 KEE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 162/362 (44%), Gaps = 19/362 (5%)
Query: 91 ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
A S ++ G++P+ FSTLI G V++ ++ + + D + +TL
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEG--RVSEALELVDRMVEMGHKPDLITINTL 199
Query: 151 VDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
V+ G + D + N++++ +++ +SG+ + A+ L R+ +N+
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 207 ----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
++ +I GL + G+ +AF F +M +GIT + + + ++G N W+ G
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT-TNIITYNILIGGFCNAGRWDDGA 318
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGT 318
++ +I V + L+D + K L A+ + EM + D +++TS+I G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
+ ++A + D MVS PN TF LI + G LFR M G+
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVAD 437
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
Y L+ F G L+ A+ L + M V P+ T+ LL +G ++ A+ I +
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 436 KL 437
K+
Sbjct: 498 KI 499
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 196/466 (42%), Gaps = 66/466 (14%)
Query: 30 AQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD---TLPHR-DLVSWASVLSACNLA 85
+IIK G + +TL++ G + +AL+L D + H+ DL++ ++++ L+
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN--- 142
A+ + ++ G QP+ + ++ + G+ A LL
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLN-------VMCKSGQTALAMELLRKMEERNI 259
Query: 143 --DDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALR 196
D V S ++D K G D +F+ + + N I++ +I G+ +GR + +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 197 LFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
L R+ + N+ ++ LI V+ G +A +M GI D + +S++
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA-PDTITYTSLIDGF 378
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DV 308
+ Q+ L++ G + + N L++ Y K + + +F +MS + D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFR- 367
V++ ++I G + G+ A L+ +MVS +V PN VT+ L+ + G K +F
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 368 -----------------------SMVED----------YGIKPSLQHYTCLLDLFSRSGH 394
S V+D G+KP ++ Y ++ + G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 395 LDEAENLIRTMPV---SPDEPTWAALLSACKHHGNTQMAVRIADKL 437
L EAE L R M +PD T+ L+ A G+ +V++ ++L
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 51/316 (16%)
Query: 174 NSISWTAMISGYARSGRRSEAL----RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTF 229
N+I+++ +I+G GR SEAL R+ +L L++GL SG +A
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
KM E G Q + + G ++++ K
Sbjct: 217 DKM-------------------------VEYGCQPNAVTYG-----------PVLNVMCK 240
Query: 290 CSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVT 345
A + +M + D V ++ II G +HG + A L+++M + N +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 346 FVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
+ LI N G G L R M++ I P++ ++ L+D F + G L EAE L + M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 406 ---PVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPS--SYILLSNVYAGASM 460
++PD T+ +L+ + A ++ D L+ K DP+ ++ +L N Y A+
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVD-LMVSKGCDPNIRTFNILINGYCKANR 418
Query: 461 WENVSKVRKLMMVKEV 476
++ ++ + M ++ V
Sbjct: 419 IDDGLELFRKMSLRGV 434
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 182/425 (42%), Gaps = 32/425 (7%)
Query: 39 QHEPFP-----NTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-----CNLANLP 88
Q P P N L A K + L L + + + LS C L
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 89 HRALSISRSLLHQGFQPDHFVFSTLIKA-CANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
+ A S ++ G++PD +F+TL+ C V++ ++ + + +
Sbjct: 141 Y-AFSTMGKIMKLGYEPDTVIFNTLLNGLCL---ECRVSEALELVDRMVEMGHKPTLITL 196
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPY 203
+TLV+ G + D + N +++ +++ +SG+ + A+ L R+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 204 KNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
+N+ ++ +I GL + G+ +AF F +M +G AD + ++++G N W+
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK-ADIITYNTLIGGFCNAGRWD 315
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV----VSWTSII 315
G ++ +I V + L+D + K L A + EM ++ + +++ S+I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G + + EEA+ + D M+S P+ +TF LI + G LFR M G+
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-SLRGV 434
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVR 432
+ Y L+ F +SG L+ A+ L + M V PD ++ LL +G + A+
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 433 IADKL 437
I K+
Sbjct: 495 IFGKI 499
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 189/457 (41%), Gaps = 72/457 (15%)
Query: 30 AQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD---TLPHR-DLVSWASVLSACNLA 85
+I+K G NTLL+ + +AL+L D + H+ L++ ++++ L
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN--- 142
A+ + ++ GFQP+ + ++ + G+ A LL
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLN-------VMCKSGQTALAMELLRKMEERNI 259
Query: 143 --DDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALR 196
D V S ++D K G D +F+ + + I++ +I G+ +GR + +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 197 LFRE------SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVG 250
L R+ SP N+ ++ LI V+ G +A +M Q GI + + +S++
Sbjct: 320 LLRDMIKRKISP--NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA-PNTITYNSLID 376
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV-- 308
E Q+ L+I G + + N L++ Y K + + +F EMS + V
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 309 --VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
V++ +++ G Q G+ E A L+ +MVS RV+P+ V++ L+ + G + K +F
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 367 ------------------------RSMVED----------YGIKPSLQHYTCLLDLFSRS 392
S V+D G+K + Y ++ R
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556
Query: 393 GHLDEAENLIRTMPV---SPDEPTWAALLSACKHHGN 426
L +A+ L R M +PDE T+ L+ A H G+
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILIRA--HLGD 591
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 164/409 (40%), Gaps = 51/409 (12%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSA-CNLANLPHRALSISRSLL 99
N+++D +GK G L D + F+ + D++++ ++++ C LP L R +
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI-GLEFYREMK 359
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG- 158
G +P+ +STL+ A G + Q + + ++ ++L+D K G
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQ--QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 159 LPD---YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE----SPYKNLFAWTA 211
L D G + N +++TA+I G + R EA LF + NL ++ A
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
LI G V++ N A +++ GI D L+ + + +L E K V +
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIK-PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALY 331
G ++ I L+D Y K G E L L
Sbjct: 537 GIKANSLIYTTLMDAYFK-------------------------------SGNPTEGLHLL 565
Query: 332 DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSR 391
D+M ++ VTF LI LVSK F + D+G++ + +T ++D +
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 392 SGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
++ A L M + PD + +L+ GN A+ + DK+
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 116/238 (48%), Gaps = 9/238 (3%)
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+ AL S L+ G +A F KM++ + + ++ A L + K+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRV-FPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQ 323
+IG G VF N ++D K D+ AA+ +F EM + D V++ S+I G + G+
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
++ + +++M +P+ +T+ LI G + G +R M + G+KP++ Y+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNGLKPNVVSYS 371
Query: 384 CLLDLFSRSGHLDEAENL---IRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
L+D F + G + +A +R + + P+E T+ +L+ A GN A R+ +++L
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 186/424 (43%), Gaps = 28/424 (6%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
+L + K+GL + N ++D K L +A +F+ + ++ D +++ S++
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
A + +L + + V+++LIK N G G +++ + +
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG--RKEDGHKIYKDMINQNCSP 515
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI----SWTAMISGYARSGRRSEALRLF 198
D + +T +D K G P+ GRA+F+ I + + S++ +I G ++G +E LF
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 199 ----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS--SVVGAC 252
+ + A+ +I G + G A+ +M+ +G +P V++ SV+
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF---EPTVVTYGSVIDGL 632
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DV 308
A + + + E V I ++L+D + K + A I E+ +K ++
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
+W S++ + + EAL + M + PN+VT+ LI V +K ++
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKHHG 425
M + G+KPS YT ++ +++G++ EA L + PD + A++ +G
Sbjct: 753 M-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL-SNG 810
Query: 426 NTQM 429
N M
Sbjct: 811 NRAM 814
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 157/373 (42%), Gaps = 31/373 (8%)
Query: 59 DALQLFDTLPHRDLVS-WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKAC 117
D +Q+ R S + +++ A + N L++ + + G++P +F+TLI+
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 118 ANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS----L 173
A G V+ + S D V+ + +D + K G D F I +
Sbjct: 214 AKEG--RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKN-----LFAWTALISGLVQSGNGVDAFYT 228
+ +++T+MI ++ R EA+ +F E KN +A+ +I G +G +A+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMF-EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 229 FVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI--GLGYESCVFIS--NALV 284
+ R +G + S + C + ++GK L + + ++ +S N L+
Sbjct: 331 LERQRAKGS------IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILI 384
Query: 285 DMYAKCSDLVAAKYIFCEMSRKDV---VSWTSIIVGTAQHGQA-EEALALYDDMVSARVK 340
DM + L A + M + + V +I+V Q +EA A++++M
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAEN 400
P+E+TF LI VG V ++ M+ D + + YT L+ F G ++
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 401 LIRTM---PVSPD 410
+ + M SPD
Sbjct: 504 IYKDMINQNCSPD 516
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 16/273 (5%)
Query: 178 WTAMISGYARSGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVD----AFYTFVKMR 233
+T +I G+A+ GR AL L E +L A L + + S V A+ F ++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
G+ D + +S++G + ++ + C + N ++ Y
Sbjct: 266 ANGLK-PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 294 VAAKYIFCEMSRK-----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVG 348
A Y E R V+++ I+ + G+ +EAL ++++M PN T+
Sbjct: 325 DEA-YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNI 382
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP-- 406
LI G + L SM + G+ P+++ ++D +S LDEA + M
Sbjct: 383 LIDMLCRAGKLDTAFELRDSM-QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 407 -VSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+PDE T+ +L+ G A ++ +K+L
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 33/342 (9%)
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
G P+ + +S +I G +V Q ++ L++ + VV TLVD + K
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTG--NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Query: 161 DYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYKNL----FAWTAL 212
R++F + N + +I G+ +SG EA+ L E NL F +T L
Sbjct: 321 VTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
I+GL +A F KM+ E I + S + G C + E + + G
Sbjct: 381 INGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM-EQALDLCSEMTASG 439
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEAL 328
E + + L+D Y D+ AA ++ EM+ K DVV++T++I + +EAL
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 329 ALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH------- 381
LY DM+ A + PN+ TF AC G +GR S+ D+ + + Q
Sbjct: 500 RLYSDMLEAGIHPNDHTF-----ACLVDGFWKEGRL---SVAIDFYQENNQQRSCWNHVG 551
Query: 382 YTCLLDLFSRSGHLDEAENL---IRTMPVSPDEPTWAALLSA 420
+TCL++ ++G++ A +R+ ++PD ++ ++L
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 188/441 (42%), Gaps = 53/441 (12%)
Query: 14 LSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP---- 68
LS+VA+ + F L L Q+ G+S + ++ + + L AL + +
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 69 HRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
D+V+ +S+L+ + A+++ ++ G++PD F F+TLI
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI-------------- 195
Query: 129 KQVHAHFLLSPYANDDVVKSTLVDMYAKFGL-PDYGRAVFDSISSLNSISWTAMISGYAR 187
H FL N LVD + G PD +++ +++G +
Sbjct: 196 ---HGLFL----HNKASEAVALVDQMVQRGCQPDL-------------VTYGTVVNGLCK 235
Query: 188 SGRRSEALRLFRESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
G AL L ++ + A + +I GL + + DA F +M +GI D
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR-PDVF 294
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
SS++ N W ++ +I V +AL+D + K LV A+ ++ EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 304 SRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLV 359
++ D+ +++S+I G H + +EA +++ M+S PN VT+ LI V
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 360 SKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAA 416
+G LFR M + G+ + YT L+ F ++ D A+ + + M V P+ T+
Sbjct: 415 EEGMELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 417 LLSACKHHGNTQMAVRIADKL 437
LL +G A+ + + L
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYL 494
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 214/510 (41%), Gaps = 60/510 (11%)
Query: 1 MSLSRHAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
+ +S Y ++ R+S L + A+++K G ++LL+ Y + D
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 60 ALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIK 115
A+ L D + D ++ +++ L N A+++ ++ +G QPD + T++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 116 ACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL-- 173
G ++ + D V+ +T++D K+ D +F + +
Sbjct: 232 GLCKRG--DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 174 --NSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFY 227
+ +++++IS GR S+A RL + + N+ ++ALI V+ G V+A
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 228 TFVKMRQEGITIADPLVLSSVV-GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDM 286
+ +M + I D SS++ G C + + E K + L+I V + L+
Sbjct: 350 LYDEMIKRSID-PDIFTYSSLINGFCMHDRLDE-AKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 287 YAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPN 342
+ K + +F EMS++ + V++T++I G Q + A ++ MVS V PN
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 343 EVTFVGLIYACSNVGLVSKGRALFRSM------------------------VED------ 372
+T+ L+ G ++K +F + VED
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 373 ----YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKHHG 425
G+ P++ Y ++ F R G +EA++L++ M P+ T+ L+ A G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 426 NTQMAVRIADKLL-CLKPEDPSSYILLSNV 454
+ + + + ++ C D S+ L++N+
Sbjct: 588 DREASAELIKEMRSCGFAGDASTIGLVTNM 617
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 154/341 (45%), Gaps = 34/341 (9%)
Query: 105 PDHFVFSTLIKACANMGP--LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDY 162
P F+ L+ A A M L ++ G+Q+ + ++D S ++ + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI----SHDLYTYSIFINCFCRRSQLSL 136
Query: 163 GRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFR---ESPYK-NLFAWTALIS 214
AV + L + ++ +++++GY S R S+A+ L E YK + F +T LI
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV-GACA----NLAVWELGKQVHGLVI 269
GL +A +M Q G D + +VV G C +LA+ L K G +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQ-PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI- 254
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS----RKDVVSWTSIIVGTAQHGQAE 325
E+ V I N ++D K + A +F EM R DV +++S+I +G+
Sbjct: 255 ----EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
+A L DM+ ++ PN VTF LI A G + + L+ M++ I P + Y+ L
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSL 369
Query: 386 LDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSA-CK 422
++ F LDEA+++ M P+ T++ L+ CK
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 193/453 (42%), Gaps = 64/453 (14%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHRDLV----SWASVLSACNLANLPHRALSISRSLLH 100
NTL+D Y + G + +AL+L D + +++V ++ +L + H LS+ + +L
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
+G D STL++A +G N+ ++ + L D + + ++ K
Sbjct: 465 RGVNADEISCSTLLEALFKLGDF--NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 161 DYGRAVFDSISSLNSI----SWTAMISGYARSGRRSEALRLFRESPYKNLF----AWTAL 212
+ + + D+++ ++ A+ GY + G EA + K +F + L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC-------ANLAVWELGKQVH 265
ISG + + +++R G+T + + G C A +E+ ++
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK-- 640
Query: 266 GLVIGLGY---------------ESCVFIS-----NALVDMYAKCSDLVAAKYIFCEMSR 305
G+ + + E+C+ + + L+ Y + + A C ++
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 306 K----------------DVVSWTSIIVGTAQHGQAEEALALYDDMVSA-RVKPNEVTFVG 348
K + + + I G + G+ E+A L+ D++S+ R P+E T+
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 349 LIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP-- 406
LI+ C+ G ++K L R + GI P++ Y L+ + G++D A+ L+ +P
Sbjct: 761 LIHGCAIAGDINKAFTL-RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 407 -VSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
++P+ T+ L+ GN A+R+ +K++
Sbjct: 820 GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 173/412 (41%), Gaps = 36/412 (8%)
Query: 135 FLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISS-----LNSISWTAMISGYARSG 189
F +SP D S +V+ Y + G D S LN +++ ++I+GYA G
Sbjct: 219 FEVSP---DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 190 R---RSEALRLFRESPY-KNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
+ LRL E +N+ +T+LI G + G +A + F ++++ + +AD +
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL-VADQHMY 334
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS- 304
++ +VH +I +G + I N+L++ Y K LV A+ IF M+
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 305 ---RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
+ D ++ +++ G + G +EAL L D M V P +T+ L+ S +G
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL---IRTMPVSPDEPTWAALL 418
+L++ M++ G+ + LL+ + G +EA L + + D T ++
Sbjct: 455 VLSLWKMMLKR-GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 419 SACKHHGNTQMAVRIADKLLCLKPEDP-SSYILLSNVYAGASMWENVSKVRKLMMVKEVK 477
S A I D + + + +Y LS+ Y V +++ VKE
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY------KVGNLKEAFAVKEYM 567
Query: 478 KEPG-YSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTS 528
+ G + I++ Y S K L + L E+R RG P +
Sbjct: 568 ERKGIFPTIEM-------YNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 27/314 (8%)
Query: 130 QVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI----SWTAMISGY 185
+V F SP D ++K +YA+ GL VFD++ + I S +++S
Sbjct: 146 RVFKEFSFSPTVFDMILK-----VYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 186 ARSGRRSEALRL------FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
R G AL + F SP ++F + +++ +SGN VD F K + + +
Sbjct: 201 VRKGENFVALHVYDQMISFEVSP--DVFTCSIVVNAYCRSGN-VDKAMVFAKETESSLGL 257
Query: 240 A-DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+ + +S++ A + E +V L+ G V +L+ Y K + A++
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 299 IFCEMSRKDVVS----WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS 354
+F + K +V+ + ++ G + GQ +A+ ++D+M+ V+ N LI
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDE 411
G + + +F M D+ +KP Y L+D + R+G++DEA L M V P
Sbjct: 378 KSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 412 PTWAALLSACKHHG 425
T+ LL G
Sbjct: 437 MTYNILLKGYSRIG 450
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/409 (18%), Positives = 169/409 (41%), Gaps = 28/409 (6%)
Query: 6 HAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
+ YA+ + + R ++++ G+S++ +L+ Y K GL+++A +F+
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSER--------GVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 66 TLPHRDLVS----WASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMG 121
L + LV+ + ++ A+ + +++ G + + + ++LI G
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 122 PLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI----S 177
L + +Q+ + D +TLVD Y + G D + D + + +
Sbjct: 381 QLV--EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 178 WTAMISGYARSGRRSEALRLFRESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMR 233
+ ++ GY+R G + L L++ + + A + L+ L + G+ +A + +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
G+ + D + L+ ++ + K++ V + V AL Y K +L
Sbjct: 499 ARGL-LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 294 VAAKYIFCEMSRKDVVS----WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
A + M RK + + ++I G ++ + L ++ + + P T+ L
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGAL 617
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEA 398
I N+G++ K A M+E GI ++ + + + R +DEA
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEK-GITLNVNICSKIANSLFRLDKIDEA 665
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 187/429 (43%), Gaps = 36/429 (8%)
Query: 37 LSQHEPFP-----NTLLDAYGKCGLLQDALQLFDTLPH----RDLVSWASVLSA-CNLAN 86
+ Q P P N LL A K + L + + + DL S+ +++ C +
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH---VNQGKQVHAHFLLSPYAND 143
LP AL++ ++ G++PD S+L+ G H +++ + + Y +
Sbjct: 131 LPL-ALAVLGKMMKLGYEPDIVTLSSLLN-----GYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFR 199
V +TL+ A+ D + + + ++ +++G + G AL L +
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
Query: 200 ESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
+ + A +T +I L N DA F +M +GI + + +S++ N
Sbjct: 245 KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR-PNVVTYNSLIRCLCNY 303
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSW 311
W ++ +I V +AL+D + K LV A+ ++ EM ++ D+ ++
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
+S+I G H + +EA +++ M+S PN VT+ LI V +G LFR M +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQ 428
+ ++ + T + LF ++G D A+ + + M V PD T++ LL +G +
Sbjct: 424 RGLVGNTVTYNTLIQGLF-QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 429 MAVRIADKL 437
A+ + + L
Sbjct: 483 KALVVFEYL 491
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 170/382 (44%), Gaps = 32/382 (8%)
Query: 46 TLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSA-CNLANLPHRALSISRSLLH 100
T+++ K G + AL L + D+V + +++ A CN N+ + AL++ + +
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV-NDALNLFTEMDN 283
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA----NDDVVK-STLVDMYA 155
+G +P+ +++LI+ N G+ A LLS N +VV S L+D +
Sbjct: 284 KGIRPNVVTYNSLIRCLCN-------YGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 156 KFGLPDYGRAVFDSI--SSLNS--ISWTAMISGYARSGRRSEALRLFR----ESPYKNLF 207
K G ++D + S++ +++++I+G+ R EA +F + + N+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+ LI G ++ + F +M Q G+ + + + ++++ ++ +++
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQ 323
++ G + + L+D K L A +F + + D+ ++ +I G + G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
E+ L+ + VKPN + + +I GL + ALFR M ED G P+ Y
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYN 574
Query: 384 CLLDLFSRSGHLDEAENLIRTM 405
L+ R G + LI+ M
Sbjct: 575 TLIRARLRDGDKAASAELIKEM 596
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 190/444 (42%), Gaps = 66/444 (14%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
++ H + +SG + N L++ Y K GL DA W
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA--------------WG--------- 329
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
++ +L+ G P ++ I A + G + A LLS A DV
Sbjct: 330 --------VTDEMLNAGIYPTTSTYNIYICALCDFGRID-------DARELLSSMAAPDV 374
Query: 146 VK-STLVDMYAKFGLPDYGRAVFDSISSLNS----ISWTAMISGYARSGRRSEALRLFRE 200
V +TL+ Y K G +FD + + + +++ +I G SG A RL E
Sbjct: 375 VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEE 434
Query: 201 SPYKNLF----AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLA 256
+ +F +T L+ G V++GN A + +M ++GI + VG L
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLG 493
Query: 257 VWELGKQVHGLVIGLGYESC-VFISNALVDMYAKCSDLVAAKYIFCEMSRK--------D 307
+ ++H ++ + + + I N +D K +LV A E RK D
Sbjct: 494 DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA----IEFQRKIFRVGLVPD 549
Query: 308 VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFR 367
V++T++I G ++GQ + A LYD+M+ R+ P+ +T+ LIY + G + + +
Sbjct: 550 HVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ-YS 608
Query: 368 SMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHH 424
+ ++ G++P++ + LL ++G++DEA + M + P++ ++ L+S
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDF 668
Query: 425 GNTQMAVRIADKLLCLKPEDPSSY 448
+ V++ ++L K +P Y
Sbjct: 669 EKWEEVVKLYKEMLD-KEIEPDGY 691
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 170/397 (42%), Gaps = 56/397 (14%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA-CNLANLPHRALSISRSLL 99
NTL+D Y K + D +L ++ + +L+S+ V++ C + + ++ +
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE-MN 302
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
+G+ D ++TLIK G H Q +HA L + ++L+ K G
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFH--QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 160 PDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRE------SPYKNLFAW 209
+ D + N ++T ++ G+++ G +EA R+ RE SP ++ +
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP--SVVTY 418
Query: 210 TALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVI 269
ALI+G +G DA M+++G++ D + S+V+
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLS-PDVVSYSTVLSG------------------ 459
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALA 329
F + VD + + K I + D ++++S+I G + + +EA
Sbjct: 460 --------FCRSYDVDEALRVKREMVEKGI-----KPDTITYSSLIQGFCEQRRTKEACD 506
Query: 330 LYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
LY++M+ + P+E T+ LI A G + K L MVE G+ P + Y+ L++
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGL 565
Query: 390 SRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKH 423
++ EA+ L+ + P + T+ L+ C +
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 155/373 (41%), Gaps = 67/373 (17%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLH 100
N L++ + G ++DA+ + + + + D+VS+++VLS + AL + R ++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
+G +PD +S+LI+ G + K+ L + + GLP
Sbjct: 479 KGIKPDTITYSSLIQ-----GFCEQRRTKEA----------------CDLYEEMLRVGLP 517
Query: 161 DYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTALISGL 216
+ ++TA+I+ Y G +AL+L E K ++ ++ LI+GL
Sbjct: 518 P------------DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
+ +A +K+ E ++ + +++ C+N+ K V L+ G +
Sbjct: 566 NKQSRTREAKRLLLKLFYEE-SVPSDVTYHTLIENCSNIEF----KSVVSLIKGFCMKGM 620
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYD 332
+ A +F M K D ++ +I G + G +A LY
Sbjct: 621 ----------------MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
+MV + + VT + L+ A G V++ ++ ++ + + Q L+++ R
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA-KVLVEINHRE 723
Query: 393 GHLDEAENLIRTM 405
G++D +++ M
Sbjct: 724 GNMDVVLDVLAEM 736
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 164/345 (47%), Gaps = 15/345 (4%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
D+V+ +S+++ N A+ + + GF+PD +++T+I +G VN +
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG--LVNDAVE 195
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFG-LPDYGRAVFDSISS---LNSISWTAMISGYA 186
+ D V ++LV G D R + D + N I++TA+I +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 187 RSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
+ G+ SEA++L+ E + ++F + +LI+GL G +A M +G + D
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG-CLPDV 314
Query: 243 LVLSSVV-GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
+ ++++ G C + V E G ++ + G N ++ Y + AA+ IF
Sbjct: 315 VTYNTLINGFCKSKRVDE-GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 302 EM-SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
M SR ++ +++ ++ G + + E+AL L+++M + ++ + T+ +I+ +G V
Sbjct: 374 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
LFRS+ G+KP + YT ++ F R D+++ L R M
Sbjct: 434 DAWDLFRSL-SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 176/374 (47%), Gaps = 40/374 (10%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
DL S+ V++ + ALS+ ++ G++PD S+LI QG +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC--------QGNR 154
Query: 131 V-HAHFLLSP-----YANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTA 180
V A L+S + D V+ +T++D K GL + +FD + +++++ +
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 181 MISGYARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
+++G SGR S+A RL R+ + N+ +TA+I V+ G +A + +M +
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 237 ITIADPLVL---SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
+ DP V S + G C + V E KQ+ L++ G V N L++ + K +
Sbjct: 275 V---DPDVFTYNSLINGLCMHGRVDE-AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 294 VAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
+F EM+++ D +++ +II G Q G+ + A ++ M S +PN T+ L
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSIL 387
Query: 350 IYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP--- 406
+Y V K LF +M + I+ + Y ++ + G++++A +L R++
Sbjct: 388 LYGLCMNWRVEKALVLFENM-QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 407 VSPDEPTWAALLSA 420
+ PD ++ ++S
Sbjct: 447 LKPDVVSYTTMISG 460
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 138/349 (39%), Gaps = 58/349 (16%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLH 100
NT++D K GL+ DA++LFD + D V++ S+++ + A + R ++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
+ P+ F+ +I G ++ +++ D ++L++ G
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKF--SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRV 295
Query: 161 DYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYKNL----FAWTAL 212
D + + D + + + +++ +I+G+ +S R E +LFRE + L + +
Sbjct: 296 DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLG 272
I G Q+G A F +M ++L G C N W + K
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILL---YGLCMN---WRVEK---------- 399
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEAL 328
ALV +F M + D+ ++ +I G + G E+A
Sbjct: 400 ---------ALV--------------LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 329 ALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKP 377
L+ + +KP+ V++ +I K L+R M ED G+ P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED-GLLP 484
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 194/428 (45%), Gaps = 37/428 (8%)
Query: 37 LSQHEPFPN-----TLLDAYGKCGLLQDALQLFDTLPHRDLVSWAS-----VLSACNLAN 86
+++H PN TL+ + KC + +ALQL + + V A +L C
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
+ A ++R L+ +GF PD + L+ +G V+ K + F P + V+
Sbjct: 303 INEAAKMVNRMLI-RGFAPDDITYGYLMNGLCKIG--RVDAAKDL---FYRIPKP-EIVI 355
Query: 147 KSTLVDMYAKFGLPDYGRAVF-DSISSLNSI----SWTAMISGYARSGRRSEALRLFRES 201
+TL+ + G D +AV D ++S + ++ ++I GY + G AL + +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 202 PYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA-CANLA 256
K N++++T L+ G + G +A+ +M +G+ + + + ++ A C
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHR 474
Query: 257 VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV----SWT 312
+ E ++ + G + V+ N+L+ + ++ A ++ +M + VV ++
Sbjct: 475 IPE-AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 313 SIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
++I + G+ +EA L ++MV +E+T+ LI G V K R+LF M+ D
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 373 YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV---SPDEPTWAALLSACKHHGNTQM 429
G PS L++ RSG ++EA + M + +PD T+ +L++ G +
Sbjct: 594 -GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 430 AVRIADKL 437
+ + KL
Sbjct: 653 GLTMFRKL 660
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 169/416 (40%), Gaps = 17/416 (4%)
Query: 72 LVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQV 131
L ++ V+ A N ALS+ R + G P+ ++ TLI + + VN+ Q+
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN--RVNEALQL 274
Query: 132 HAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSI----SSLNSISWTAMISGYAR 187
L D + ++ KF + + + + + + I++ +++G +
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 188 SGRRSEALRLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS 247
GR A LF P + + LI G V G DA M + D +S
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 248 VVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS--- 304
++ + L +V + G + V+ LVD + K + A + EMS
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 305 -RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGR 363
+ + V + +I + + EA+ ++ +M KP+ TF LI V +
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 364 ALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV--SP-DEPTWAALLSA 420
L R M+ + G+ + Y L++ F R G + EA L+ M SP DE T+ +L+
Sbjct: 515 WLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 421 CKHHGNTQMAVRIADKLL--CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVK 474
G A + +K+L P + S IL+ N + M E + +K M+++
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILI-NGLCRSGMVEEAVEFQKEMVLR 628
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 167/382 (43%), Gaps = 19/382 (4%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
+L + + +++ C A S ++ G++PD FSTLI G V++ +
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG--RVSEALE 163
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYA 186
+ + + + + LV+ G + D + N +++ ++
Sbjct: 164 LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 187 RSGRRSEALRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
+SG+ + A+ L R+ + + ++ +I GL + G+ +AF F +M +G AD
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK-ADI 282
Query: 243 LVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCE 302
++ ++++ W+ G ++ +I V +AL+D + K L A+ + E
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 303 MSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
M ++ D V++TS+I G + Q ++A + D MVS PN TF LI L
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWA 415
+ G LFR M G+ Y L+ F G L+ A+ L + M V PD ++
Sbjct: 403 IDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 416 ALLSACKHHGNTQMAVRIADKL 437
LL +G + A+ I +K+
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKI 483
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 197/466 (42%), Gaps = 66/466 (14%)
Query: 30 AQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD---TLPHR-DLVSWASVLSACNLA 85
+IIK G +TL++ G + +AL+L D + H+ L++ ++++ L
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN--- 142
A+ + ++ GFQP+ + ++K + G+ A LL
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLK-------VMCKSGQTALAMELLRKMEERKI 243
Query: 143 --DDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALR 196
D V S ++D K G D +F+ + + I +T +I G+ +GR + +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 197 LFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
L R+ + ++ A++ALI V+ G +A +M Q GI+ D + +S++
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS-PDTVTYTSLIDGF 362
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DV 308
+ + L++ G + N L++ Y K + + +F +MS + D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFR- 367
V++ ++I G + G+ E A L+ +MVS RV+P+ V++ L+ + G K +F
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 368 -----------------------SMVED----------YGIKPSLQHYTCLLDLFSRSGH 394
S V+D G+KP ++ Y ++ + G
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 395 LDEAENLIRTMPV---SPDEPTWAALLSACKHHGNTQMAVRIADKL 437
L EA+ L R M SP+ T+ L+ A G+ + ++ +++
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 154/392 (39%), Gaps = 57/392 (14%)
Query: 162 YGRAVFDSIS-SLNSISWTAMISGYARSGRRSEALRLFRE----SPYKNLFAWTALISGL 216
YGR VF S+S +S+ + + +A+ LF+E P L ++ L S +
Sbjct: 24 YGR-VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS-V 81
Query: 217 VQSGNGVDAFYTFVK-MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYES 275
V D K M +GI + LS ++ C L G +I LGYE
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIA-HNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140
Query: 276 CVFISNALVD---MYAKCSDLVAAKYIFCEMSRK-DVVSWTSIIVGTAQHGQAEEALALY 331
+ L++ + + S+ + EM K +++ +++ G +G+ +A+ L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 332 DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSR 391
D MV +PNEVT+ ++ G + L R M E+ IK Y+ ++D +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCK 259
Query: 392 SGHLDEAENLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILL 451
G LD A NL M + + AD ++ Y L
Sbjct: 260 DGSLDNAFNLFNEMEIKGFK----------------------ADIII---------YTTL 288
Query: 452 SNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPMKDEILGLM 511
+ A W++ +K+ + M+ +++ + V ++ +K+ L
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDV------------VAFSALIDCFVKEGKLREA 336
Query: 512 RKLDAEMRKRGYVPDTSYVLHDMDQQEKERQL 543
+L EM +RG PDT +D KE QL
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 14/223 (6%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA 81
++LH ++I+ G+S +L+D + K L A + D + + ++ ++ +++
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
ANL L + R + +G D ++TLI+ +G L V K++ +
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV--AKELFQEMVSRRVR 454
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALRL 197
D V L+D G P+ +F+ I L+ + +I G + + +A L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 198 FRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
F P K ++ + +I GL + G+ +A F KM ++G
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/445 (20%), Positives = 194/445 (43%), Gaps = 32/445 (7%)
Query: 3 LSRHAYALKSQLSSVARQSPFLT-KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDAL 61
L +A+ + +S S F + K ++ + G+ ++ L++ Y K G + +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 62 QLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKAC 117
+ ++ + D ++ +++ + A I R + +G PD F + LI
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 118 ANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL---- 173
+ +G + + + + + ++ + L+ + + G + + + D +S
Sbjct: 638 SKLGNMQ--KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 174 NSISWTAMISGYARSGRRSEALRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYTF 229
N++++ +I GY +SG +EA RLF E K L F +T L+ G + N V+ T
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL-NDVERAITI 754
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCV----FISNALVD 285
++G + ++++ EL +V ++ ++ N ++D
Sbjct: 755 FGTNKKGCA-SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 286 MYAKCSDLVAAKYIFCEMSRKD----VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKP 341
K +L AAK +F +M + V+++TS++ G + G+ E ++D+ ++A ++P
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 342 NEVTFVGLIYACSNVGLVSKGRALFRSMVE----DYGIKPSLQHYTCLLDLFSRSGHLDE 397
+ + + +I A G+ +K L M D G K S+ LL F++ G ++
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 398 AENLIRTM---PVSPDEPTWAALLS 419
AE ++ M PD T L++
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELIN 958
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 194/466 (41%), Gaps = 52/466 (11%)
Query: 90 RALSISRSLLHQ----GFQPDHFVFSTLI-------KACANMGPLHVNQGKQVHAHFLLS 138
+ L ++SLL + G D+ +S LI A A G +H + V +
Sbjct: 291 KRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH----EMVSHGINIK 346
Query: 139 PYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI----SWTAMISGYARSGRRSEA 194
PY D + + +K G+ + +A+FD + + I ++ ++I GY R +
Sbjct: 347 PYMYD-----CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 195 LRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVG 250
L E +N+ + + ++ G+ SG+ +D Y VK + ++ ++++
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGD-LDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 251 ACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS----RK 306
+ + +V + G +F N+L+ +K + A+ EM +
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
+ ++ + I G + + A +M V PN+V GLI G V + + +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKH 423
RSMV D GI + YT L++ ++ +D+AE + R M ++PD ++ L++
Sbjct: 581 RSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 424 HGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWE-NVSKVRKLMMVKEVKK-EPG 481
GN Q A I D+++ E + +++ N+ G + K ++L+ VK P
Sbjct: 640 LGNMQKASSIFDEMV---EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP- 695
Query: 482 YSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDT 527
+ V Y K L +L EM+ +G VPD+
Sbjct: 696 ---------NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 192/457 (42%), Gaps = 52/457 (11%)
Query: 8 YALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDT 66
+ LS++A+ F L L ++ + G+S + N L++ + + + AL L
Sbjct: 86 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 145
Query: 67 LP----HRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP 122
+ +V+ +S+L+ A+++ ++ G++PD F+TLI
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI-------- 197
Query: 123 LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMI 182
H FL N LVD + G N +++ ++
Sbjct: 198 ---------HGLFL----HNKASEAVALVDRMVQRGCQP------------NLVTYGVVV 232
Query: 183 SGYARSGRRSEALRLFRESP----YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+G + G A L + N+ ++ +I L + + DA F +M +G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+ + SS++ N W ++ +I V NAL+D + K LV A+
Sbjct: 293 -PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 299 IFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS 354
++ EM ++ D+ +++S+I G H + +EA +++ M+S PN VT+ LI
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDE 411
+ +G LFR M + G+ + YT L+ F ++ D A+ + + M V P+
Sbjct: 412 KAKRIDEGVELFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 412 PTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSY 448
T+ LL +G + A+ + + L K E P+ Y
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME-PTIY 506
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 192/459 (41%), Gaps = 60/459 (13%)
Query: 1 MSLSRHAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQD 59
+ +S + Y ++ R+S L L +++K G ++LL+ Y + D
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 60 ALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIK 115
A+ L D + D +++ +++ L N A+++ ++ +G QP+ + ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 116 ACANMGPLHV--NQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL 173
G + + N ++ A + + V+ ST++D K+ D +F + +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEA----AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 174 ----NSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDA 225
N I+++++IS R S+A RL + + N+ + ALI V+ G V+A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 226 FYTFVKMRQEGITIADPLVLSSVV-GACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
+ +M + I D SS++ G C + + E K + L+I V N L+
Sbjct: 350 EKLYDEMIKRSID-PDIFTYSSLINGFCMHDRLDE-AKHMFELMISKDCFPNVVTYNTLI 407
Query: 285 DMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
+ + K + +F EMS++ + V++T++I G Q + A ++ MVS V
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 341 PNEVTFVGLIYACSNVGLVSKGRALFRSM------------------------VED---- 372
PN +T+ L+ G + K +F + VED
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 373 ------YGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
G+KP + Y ++ F R G +EA+ L R M
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 145/345 (42%), Gaps = 56/345 (16%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA-CNLANLPHRALSISRSLL 99
+T++D+ K DAL LF + ++ ++++++S++S CN + +S ++
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS-DMI 322
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
+ P+ F+ LI A G L + ++++ + D S+L++ +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLV--EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 160 PDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTA 211
D + +F+ + S N +++ +I+G+ ++ R E + LFRE + N +T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
LI G Q+ + +A F +M +G+ P +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGV---HPNIMTY------------------------ 473
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD----VVSWTSIIVGTAQHGQAEEA 327
N L+D K L A +F + R + ++ +I G + G+ E+
Sbjct: 474 ---------NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
L+ + VKP+ + + +I GL + ALFR M ED
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 22/350 (6%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKA-CANMGPLHVNQGK 129
DLV++ S+L+ N A+++ +L GF+P+ ++TLI+ C N H+N
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR---HLNHAV 208
Query: 130 QVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYG------RAVFDSISSLNSISWTAMIS 183
++ + + V + LV + G +G R + N I++TA+I
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIG--RWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 184 GYARSGRRSEALRLF----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
+ + G+ EA L+ + S Y ++F + +LI+GL G +A F M + G
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
+ + + + G C + V E G ++ + G + L+ Y A+ +
Sbjct: 327 NEVIYTTLIHGFCKSKRV-EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 300 FCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSN 355
F +MS + D+ ++ ++ G +G+ E+AL +++ M + N VT+ +I
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 356 VGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
+G V LF S+ G+KP++ YT ++ F R G + EA++L + M
Sbjct: 446 LGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 174/399 (43%), Gaps = 40/399 (10%)
Query: 6 HAYALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFD 65
H L SQ R S FL K ++K G +LL+ Y ++DA+ LFD
Sbjct: 126 HCVCLSSQ---PCRASCFLGK-----MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 66 TLP----HRDLVSWASVLSA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
+ ++V++ +++ C +L H A+ + + G +P+ ++ L+ +
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNH-AVELFNQMGTNGSRPNVVTYNALVTGLCEI 236
Query: 121 GPLHVNQGKQVHAHFLLSPYAN-----DDVVKSTLVDMYAKFGLPDYGRAVFDSISSL-- 173
G + A +LL + + + L+D + K G + +++ + +
Sbjct: 237 G-------RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 174 --NSISWTAMISGYARSGRRSEALRLF----RESPYKNLFAWTALISGLVQSGNGVDAFY 227
+ ++ ++I+G G EA ++F R Y N +T LI G +S D
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 228 TFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
F +M Q+G+ +A+ + + ++ + ++ ++V + + N L+D
Sbjct: 350 IFYEMSQKGV-VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 288 AKCSDLVAAKYIFCEMSRKD----VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
+ A IF M +++ +V++T II G + G+ E+A L+ + S +KPN
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
+T+ +I GL+ + +LF+ M ED G P+ Y
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKED-GFLPNESVY 506
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM----SRKDVVSWTSIIVGTAQHGQ 323
++G+G++ V L+ K L A +F +M SR +VV++ +++ G + G+
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
+A L DM+ R++PN +TF LI A VG + + + L+ M++ + P + Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ-MSVYPDVFTYG 297
Query: 384 CLLDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSA-CK 422
L++ G LDEA + M + P+E + L+ CK
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 46/339 (13%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
D+V++ S+++ L N A+S+ ++ G +PD +++T+I + G
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG--------- 191
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGL-PDYGRAVFDSISSLNSISWTAMISGYARSG 189
H ++ LS L D +G+ PD + +T++++G SG
Sbjct: 192 -HVNYALS-----------LFDQMENYGIRPDV-------------VMYTSLVNGLCNSG 226
Query: 190 RRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
R +A L R + ++ + ALI V+ G +DA + +M + I
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
S + G C V E +Q+ L+ G V +L++ + KC + A IF EMS+
Sbjct: 287 SLINGFCMEGCVDE-ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 306 K----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
K + +++T++I G Q G+ A ++ MVS V PN T+ L++ G V K
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 362 GRALFRSMV--EDYGIKPSLQHYTCLLDLFSRSGHLDEA 398
+F M E G+ P++ Y LL +G L++A
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 167/390 (42%), Gaps = 50/390 (12%)
Query: 31 QIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLAN 86
Q+++ G+ T++D+ K G + AL LFD + + D+V + S+++ +
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
A S+ R + + +PD F+ LI A V +GK + A L
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDA-------FVKEGKFLDAEEL---------- 269
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL 206
Y + SI+ N ++T++I+G+ G EA ++F K
Sbjct: 270 ---------------YNEMIRMSIAP-NIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 207 F----AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
F A+T+LI+G + DA F +M Q+G+T + + ++++ + + +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT-GNTITYTTLIQGFGQVGKPNVAQ 372
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD-------VVSWTSII 315
+V ++ G + N L+ + A IF +M +++ + ++ ++
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G +G+ E+AL +++DM + +T+ +I G V LF S+ G+
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GV 491
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
KP++ YT ++ R G EA L R M
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 110/220 (50%), Gaps = 12/220 (5%)
Query: 265 HGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR----KDVVSWTSIIVGTAQ 320
H ++G+ ++ ++ N L++ + + S A +M + D+V++TS+I G
Sbjct: 97 HLQIMGVSHD--LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 321 HGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQ 380
+ EEA+++ + MV +KP+ V + +I + G V+ +LF M E+YGI+P +
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVV 213
Query: 381 HYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
YT L++ SG +A++L+R M + PD T+ AL+ A G A + +++
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 438 LCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVK 477
++ + +++ G M V + R++ + E K
Sbjct: 274 --IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 22/376 (5%)
Query: 47 LLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSACNLANLPHRALSISRSLLHQG 102
L+ + +C L AL + + +V++ S+L L N A S+ ++ G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 103 FQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL-PD 161
++P+ V++TLI G L++ ++ D V +TL+ G D
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNI--ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 162 YGRAVFDSIS-SLNS--ISWTAMISGYARSGRRSEALRLFRE----SPYKNLFAWTALIS 214
R + D + S+N +++TA+I + + G EA L++E S N + ++I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYE 274
GL G DA TF M +G + + ++++ + + G ++ + G+
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 275 SCVFISNALVDMYAKCSDLVAAKYIFCEM-SRK---DVVSWTSIIVGTAQHGQAEEALAL 330
+ +F N L+ Y + L A IFC M SR+ D+++ ++ G +G+ E AL
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF-RSMVEDYGIKPSLQHYTCLLDLF 389
+DDM + V + +I+ V K LF R VE G+KP + YT ++
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE--GVKPDARTYTIMILGL 466
Query: 390 SRSGHLDEAENLIRTM 405
++G EA+ LIR M
Sbjct: 467 CKNGPRREADELIRRM 482
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 163/373 (43%), Gaps = 28/373 (7%)
Query: 71 DLVSWASVLSA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGK 129
DL S+ ++ C + L ALS+ ++ G++P F +L+ G VN+
Sbjct: 105 DLYSFTILIHCFCRCSRLSF-ALSVLGKMMKLGYEPSIVTFGSLLH-----GFCLVNRIG 158
Query: 130 QVHAHFLL---SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMI 182
+ +L S Y + VV +TL+D K G + + + + + +++ ++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 183 SGYARSGRRSEALRLFRE----SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGIT 238
+G SGR S+A R+ R+ S ++ +TALI V+ GN +A + +M Q +
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 239 IADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
+ S + G C + +++ K+ L+ G V N L+ + K +
Sbjct: 279 PNNVTYNSIINGLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 299 IF----CEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS 354
+F CE D+ ++ ++I G Q G+ AL ++ MVS RV P+ +T L++
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS---PDE 411
G + F M E + Y ++ ++ +++A L +PV PD
Sbjct: 398 VNGEIESALVKFDDMRESEKY-IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 412 PTWAAL-LSACKH 423
T+ + L CK+
Sbjct: 457 RTYTIMILGLCKN 469
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 48/354 (13%)
Query: 32 IIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLANL 87
++KSG + NTL+D K G L AL+L + + + D+V++ ++L+ +
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
A + R ++ + PD F+ LI G L ++ ++++ + S ++V
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL--DEAQELYKEMIQSSVDPNNVTY 284
Query: 148 STLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFR---- 199
+++++ G + FD ++S N +++ +ISG+ + E ++LF+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 200 ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
E ++F + LI G Q G A F M +T P +++ +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT---PDIITHCI---------- 391
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL-VAAKYIFCEMSRKDVVSWTSIIVGT 318
+HGL + ES ALV K D+ + KYI +V++ +I G
Sbjct: 392 ---LLHGLCVNGEIES------ALV----KFDDMRESEKYI-------GIVAYNIMIHGL 431
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVED 372
+ + E+A L+ + VKP+ T+ +I G + L R M E+
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 13/267 (4%)
Query: 176 ISWTAMISGYARSGRRSEALRL---FRESPYK-NLFAWTALISGLVQSGNGVDAFYTFVK 231
+++ +++ G+ R +A L +S Y+ N+ + LI GL ++G A +
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 232 MRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCS 291
M ++G+ AD + ++++ W ++ ++ V AL+D++ K
Sbjct: 202 MEKKGLG-ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 292 DLVAAKYIFCEMSRKDV----VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFV 347
+L A+ ++ EM + V V++ SII G HG+ +A +D M S PN VT+
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 348 GLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM-- 405
LI +V +G LF+ M + G + Y L+ + + G L A ++ M
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 406 -PVSPDEPTWAALLSACKHHGNTQMAV 431
V+PD T LL +G + A+
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESAL 406
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 13/275 (4%)
Query: 174 NSISWTAMISGYARSGRRSEALRLFR---ESPYK-NLFAWTALISGLVQSGNGVDAFYTF 229
+ ++ ++++G+ R R S+A+ L E YK ++ A+ A+I L ++ DAF F
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 230 VKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAK 289
++ ++GI + + +++V N + W ++ +I V +AL+D + K
Sbjct: 214 KEIERKGIR-PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 290 CSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVT 345
++ AK +F EM R D+V+++S+I G H + +EA ++D MVS + V+
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 346 FVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
+ LI V G LFR M + G+ + Y L+ F ++G +D+A+ M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 406 P---VSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
+SPD T+ LL +G + A+ I + +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 171/428 (39%), Gaps = 62/428 (14%)
Query: 35 SGLSQHEPFP-----NTLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSACNLA 85
S + + PFP N LL A K + L + DL ++ V++
Sbjct: 74 SDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV 145
ALSI +L G++PD +L+ V+ + + Y D V
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN--RVSDAVSLVDKMVEIGYKPDIV 191
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFRES 201
+ ++D K + F I N +++TA+++G S R S+A RL +
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 202 PYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV-GACANLA 256
K N+ ++AL+ V++G ++A F +M + I D + SS++ G C +
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIVTYSSLINGLCLHDR 310
Query: 257 VWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS------ 310
+ E Q+ L++ G + V N L++ + K + +F EMS++ +VS
Sbjct: 311 IDE-ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 311 -------------------------------WTSIIV--GTAQHGQAEEALALYDDMVSA 337
WT I+ G +G+ E+AL +++DM
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 338 RVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDE 397
+ + VT+ +I G V + +LF S+ G+KP + YT ++ G L E
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 398 AENLIRTM 405
E L M
Sbjct: 489 VEALYTKM 496
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 139/328 (42%), Gaps = 39/328 (11%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA-CNLANLPHRALSISRSLL 99
N ++D+ K + DA F + + ++V++ ++++ CN + A +S ++
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS-DMI 252
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
+ P+ +S L+ A G V + K++ + D V S+L++
Sbjct: 253 KKKITPNVITYSALLDAFVKNG--KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 160 PDYGRAVFDSISS----LNSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTA 211
D +FD + S + +S+ +I+G+ ++ R + ++LFRE + N +
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA-CANLAVWELGKQVHGLVIG 270
LI G Q+G+ A F +M GI+ D + ++G C N G+ LVI
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGIS-PDIWTYNILLGGLCDN------GELEKALVI- 422
Query: 271 LGYESC--------VFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGT 318
+E + ++ K + A +FC +S K D+V++T+++ G
Sbjct: 423 --FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTF 346
G E ALY M + N+ T
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 153/359 (42%), Gaps = 48/359 (13%)
Query: 91 ALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTL 150
A S+ ++ G++PD F+TLIK L ++ VV L
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKG------------------LFLEGKVSEAVV---L 180
Query: 151 VDMYAKFGL-PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKN---- 205
VD + G PD +++ ++++G RSG S AL L R+ +N
Sbjct: 181 VDRMVENGCQPDV-------------VTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 206 LFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVH 265
+F ++ +I L + G A F +M +GI + + +S+V W G +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 266 GLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQH 321
++ V N L+D++ K L A ++ EM + +++++ +++ G
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 322 GQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQH 381
+ EA + D MV + P+ VTF LI V V G +FR+ + G+ +
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN-ISKRGLVANAVT 405
Query: 382 YTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
Y+ L+ F +SG + AE L + M V PD T+ LL +G + A+ I + L
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 163/391 (41%), Gaps = 20/391 (5%)
Query: 31 QIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLAN 86
+++++G N++++ + G AL L + R D+ ++++++ +
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
A+S+ + + +G + +++L++ G N G + + + +
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW--NDGALLLKDMVSREIVPNVIT 300
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALRLF---- 198
+ L+D++ K G ++ + S N I++ ++ GY R SEA +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 199 RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
R ++ +T+LI G D F + + G+ +A+ + S +V
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL-VANAVTYSILVQGFCQSGKI 419
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD----VVSWTSI 314
+L +++ ++ G V L+D L A IF ++ + +V +T+I
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
I G + G+ E+A L+ + VKPN +T+ +I G +S+ L R M ED G
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED-G 538
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
P+ Y L+ R G L + LI M
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 186/429 (43%), Gaps = 27/429 (6%)
Query: 30 AQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLA 85
+++K G NTL+ G + +A+ L D + D+V++ S+++ +
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLH--VNQGKQVHAHFLLSPYAND 143
AL + R + + + D F +ST+I + G + ++ K++ + S
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV--- 263
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFR 199
V ++LV K G + G + + S N I++ ++ + + G+ EA L++
Sbjct: 264 -VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 200 ESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
E + N+ + L+ G +A M + + D + +S++ +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-PDIVTFTSLIKGYCMV 381
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR----KDVVSW 311
+ G +V + G + + LV + + + A+ +F EM DV+++
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 312 TSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVE 371
++ G +G+ E+AL +++D+ +++ V + +I G V LF S+
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-P 500
Query: 372 DYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPV---SPDEPTWAALLSACKHHGNTQ 428
G+KP++ YT ++ + G L EA L+R M +P++ T+ L+ A G+
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 429 MAVRIADKL 437
+ ++ +++
Sbjct: 561 ASAKLIEEM 569
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
+L+ ++I G+S + NTL+D Y L +A + D + D+V++ S++
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG--KQVHAHFLLSPY 140
+ + + R++ +G + +S L++ G + + + +++ +H +L
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-- 436
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLNSISWTAMISGYARSGRRSEALR 196
D + L+D G + +F+ + L + +T +I G + G+ +A
Sbjct: 437 --DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 197 LFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEG 236
LF P K N+ +T +ISGL + G+ +A KM ++G
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 186/437 (42%), Gaps = 52/437 (11%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA 81
K++ A++++SGLS +LL K G + + ++F + R DLV ++S++S
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 82 CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYA 141
+ +AL S+ G PD+ +++ LI+ G + V +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR----------- 433
Query: 142 NDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRES 201
N+ + + +D+ +++ ++ G + EA +LF E
Sbjct: 434 NEMLQQGCAMDV----------------------VTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 202 PYKNLF----AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAV 257
+ LF T LI G + GN +A F KM+++ I + D + ++++ +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-DVVTYNTLLDGFGKVGD 530
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD----VVSWTS 313
+ K++ ++ + LV+ L A ++ EM K+ V+ S
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDY 373
+I G + G A + + + M+S P+ +++ LIY +SK L + M E+
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 374 -GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQM 429
G+ P + Y +L F R + EAE ++R M V+PD T+ +++ N
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 430 AVRIADKLL--CLKPED 444
A RI D++L P+D
Sbjct: 711 AFRIHDEMLQRGFSPDD 727
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/530 (21%), Positives = 223/530 (42%), Gaps = 50/530 (9%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACN 83
++ +I +SG+ + N +++A K G ++ + + D+V++ +++SA +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
L A + ++ +GF P + ++T+I G + K+V A L S + D
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE--RAKEVFAEMLRSGLSPD 339
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSI----SWTAMISGYARSGRRSEALRLFR 199
+L+ K G VF + S + + +++M+S + RSG +AL F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 200 ESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV-GACAN 254
L +T LI G + G A +M Q+G + D + ++++ G C
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM-DVVTYNTILHGLCKR 458
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISN----ALVDMYAKCSDLVAAKYIFCEMSRK---- 306
+ E K + + E +F + L+D + K +L A +F +M K
Sbjct: 459 KMLGEADKLFNEMT-----ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 307 DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALF 366
DVV++ +++ G + G + A ++ DMVS + P +++ L+ A + G +++ ++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 367 RSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKH 423
M+ IKP++ ++ + RSG+ + E+ + M PD ++ L+
Sbjct: 574 DEMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 424 HGNTQMAVRIADKLL----CLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE 479
N A + K+ L P+ + +L M E +RK++
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 480 PGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDTSY 529
Y+C+ G S +D + R D EM +RG+ PD +
Sbjct: 693 STYTCMINGFVS------------QDNLTEAFRIHD-EMLQRGFSPDDKF 729
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 151/388 (38%), Gaps = 48/388 (12%)
Query: 175 SISWTAMISGYARSGRRSEA----LRLFRESPYKNL-----------------FAWTALI 213
S+S +AMI RSGR S+A LR+ R S L + LI
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 214 SGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGY 273
VQ+ +A F +R +G T++ ++++G+ + EL V+ + G
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSID-ACNALIGSLVRIGWVELAWGVYQEISRSGV 231
Query: 274 ESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALA 329
V+ N +V+ K + ++ K D+V++ ++I + G EEA
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 330 LYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLF 389
L + M P T+ +I G + + +F M+ G+ P Y LL
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEA 350
Query: 390 SRSGHLDEAENL---IRTMPVSPDEPTWAALLSACKHHGNTQMAVRIAD--KLLCLKPED 444
+ G + E E + +R+ V PD +++++S GN A+ + K L P D
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP-D 409
Query: 445 PSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETSHPM- 503
Y +L Y M +R M+ + G V H +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQ-------------GCAMDVVTYNTILHGLC 456
Query: 504 KDEILGLMRKLDAEMRKRGYVPDTSYVL 531
K ++LG KL EM +R PD SY L
Sbjct: 457 KRKMLGEADKLFNEMTERALFPD-SYTL 483
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 175/389 (44%), Gaps = 58/389 (14%)
Query: 106 DHFVFSTLIKACANMGPLHVNQGKQVH-AHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
D + F LIK C G + + + F SP + V+ +TL+D K G + +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP---NVVIYTTLIDGCCKKGEIEKAK 218
Query: 165 AVFDSISSL----NSISWTAMISGYARSGRRSEALRLFR----ESPYKNLFAWTALISGL 216
+F + L N ++T +I+G ++G + + ++ + + NL+ + +++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
+ G DAF F +MR+ G++ N+ + + L+ GL E
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVS--------------CNIVTY------NTLIGGLCREMK 318
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS 336
+ +N +VD SD + +++++ ++I G G+ +AL+L D+ S
Sbjct: 319 LNEANKVVDQMK--SDGI----------NPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 337 ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
+ P+ VT+ L+ G S + + M E+ GIKPS YT L+D F+RS +++
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIKPSKVTYTILIDTFARSDNME 425
Query: 397 EAENL---IRTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL---CLKPEDPSSYIL 450
+A L + + + PD T++ L+ G A R+ ++ C E + ++
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 451 LSNVYAGASMWENVSKVRKLMMVKEVKKE 479
L G+S R L ++KE++++
Sbjct: 486 LGYCKEGSS-------YRALKLLKEMEEK 507
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 157/378 (41%), Gaps = 46/378 (12%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
D+ S+ ++ C A ++ + L GF P+ +++TLI C G +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI------- 214
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGR 190
+ K +M K GL N ++T +I+G ++G
Sbjct: 215 -------------EKAKDLFFEM-GKLGLV------------ANERTYTVLINGLFKNGV 248
Query: 191 RSEALRLF----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
+ + ++ + + NL+ + +++ L + G DAF F +MR+ G++ +
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
+ G C + + E K V + G + N L+D + L A + ++ +
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 307 ----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
+V++ ++ G + G A + +M +KP++VT+ LI + + K
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLS 419
L SM E+ G+ P + Y+ L+ F G ++EA L ++M P+E + ++
Sbjct: 428 IQLRLSM-EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 420 ACKHHGNTQMAVRIADKL 437
G++ A+++ ++
Sbjct: 487 GYCKEGSSYRALKLLKEM 504
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 56/334 (16%)
Query: 146 VKSTLVDMYAKFGLPDYGRAVFDSISSLN----SISWTAMISGYARSGRRSEALRL---- 197
V + L++ + K G + VFD I+ + +S+ +I+GY + G E RL
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 198 --FRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANL 255
R P ++F ++ALI+ L + A F +M + G+ I + ++ ++++ +
Sbjct: 302 EKSRTRP--DVFTYSALINALCKENKMDGAHGLFDEMCKRGL-IPNDVIFTTLIHGHSRN 358
Query: 256 AVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSW 311
+L K+ + ++ G + + + N LV+ + K DLVAA+ I M R+ D +++
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 312 TSIIVGTAQHGQAEEALALYDDM-----------------------------------VS 336
T++I G + G E AL + +M +
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 337 ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
A +KP++VT+ ++ A G G L + M D G PS+ Y LL+ + G +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLLNGLCKLGQMK 537
Query: 397 EAENLIRTM---PVSPDEPTWAALLSACKHHGNT 427
A+ L+ M V PD+ T+ LL H N+
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 281 NALVDMYAKCSDLVAAKYIFCEM----SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVS 336
N L++ Y K +L + +M +R DV +++++I + + + A L+D+M
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 337 ARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLD 396
+ PN+V F LI+ S G + + ++ M+ G++P + Y L++ F ++G L
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLVNGFCKNGDLV 397
Query: 397 EAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
A N++ M + PD+ T+ L+ G+ + A+ I ++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 49/405 (12%)
Query: 72 LVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQV 131
+V+ S+L+ N A+++ ++ G+QPD F+TL+ G N+ +
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKASEA 189
Query: 132 HAHFLLSPYANDDVVKSTLVD-MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGR 190
A LV+ M K PD +++ A+I+G + G
Sbjct: 190 VA----------------LVERMVVKGCQPDL-------------VTYGAVINGLCKRGE 220
Query: 191 RSEALRLFRESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLS 246
AL L + + A ++ +I L + + DA F +M +GI D S
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR-PDVFTYS 279
Query: 247 SVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK 306
S++ N W ++ ++ V N+L+D +AK L+ A+ +F EM ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 307 ----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
++V++ S+I G H + +EA ++ MVS P+ VT+ LI V G
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLS 419
LFR M G+ + YT L+ F ++ D A+ + + M V P+ T+ LL
Sbjct: 400 MELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 420 ACKHHGNTQMAVRIADKLLCLKPE-DPSSYILLSNVYAGASMWEN 463
+G + A+ + + L K E D +Y ++S A E+
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 31/272 (11%)
Query: 169 SISSLNSISWTAMISGYARSGRRSEALRLFR---ESPYK-NLFAWTALISGLVQSGNGVD 224
SI +LNS +++G+ R SEA+ L E Y+ + +T L+ GL Q +
Sbjct: 134 SIVTLNS-----LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 188
Query: 225 AFYTFVKMRQEGITIADPLVLSSVV-GACA----NLAVWELGKQVHGLVIGLGYESCVFI 279
A +M +G D + +V+ G C +LA+ L K G + E+ V I
Sbjct: 189 AVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI-----EADVVI 242
Query: 280 SNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMV 335
+ ++D K + A +F EM K DV +++S+I +G+ +A L DM+
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 336 SARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHL 395
++ PN VTF LI A + G + + LF M++ I P++ Y L++ F L
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCMHDRL 361
Query: 396 DEAENLIRTMPVS----PDEPTWAALLSA-CK 422
DEA+ I T+ VS PD T+ L++ CK
Sbjct: 362 DEAQQ-IFTLMVSKDCLPDVVTYNTLINGFCK 392
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 177/401 (44%), Gaps = 22/401 (5%)
Query: 71 DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQ 130
DLV++ +V++ P AL++ + + D ++ST+I + HV+
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR--HVDDALN 261
Query: 131 VHAHFLLSPYANDDVVKSTLVDMYAKFGL-PDYGRAVFDSIS---SLNSISWTAMISGYA 186
+ D S+L+ +G D R + D + + N +++ ++I +A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 187 RSGRRSEALRLFRE----SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADP 242
+ G+ EA +LF E S N+ + +LI+G +A F M + + D
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDV 380
Query: 243 LVLSSVV-GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFC 301
+ ++++ G C V + G ++ + G L+ + + SD A+ +F
Sbjct: 381 VTYNTLINGFCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 302 EMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVG 357
+M +++++ +++ G ++G+ E+A+ +++ + ++++P+ T+ + G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 358 LVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS---PDEPTW 414
V G LF S+ G+KP + Y ++ F + G +EA L M PD T+
Sbjct: 500 KVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 415 AALLSACKHHGNTQMAVRIADKLL-CLKPEDPSSYILLSNV 454
L+ A G+ + + ++ C D S+Y L++++
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 153/351 (43%), Gaps = 21/351 (5%)
Query: 19 RQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVS 74
R P L L ++ K + +T++D+ K + DAL LF + ++ D+ +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 75 WASVLSA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
++S++S CN + +S +L + P+ F++LI A A G L + +++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLS-DMLERKINPNVVTFNSLIDAFAKEGKLI--EAEKLFD 334
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNS----ISWTAMISGYARSG 189
+ + V ++L++ + D + +F + S + +++ +I+G+ ++
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 190 RRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
+ + + LFR+ + N +T LI G Q+ + +A F +M +G+
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
+ + G C N E V + E ++ N + + K + +FC +S
Sbjct: 455 TLLDGLCKN-GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 306 K----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA 352
K DV+++ ++I G + G EEA L+ M P+ T+ LI A
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 180/428 (42%), Gaps = 55/428 (12%)
Query: 14 LSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR-- 70
LS++A+ + F L L Q+ G+S + + ++ + + L AL + +
Sbjct: 82 LSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGY 141
Query: 71 --DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
+V+ S+L+ N A+++ ++ G+QPD F+TL+ G N+
Sbjct: 142 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKA 196
Query: 129 KQVHAHFLLSPYANDDVVKSTLVD-MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYAR 187
+ A LV+ M K PD +++ A+I+G +
Sbjct: 197 SEAVA----------------LVERMVVKGCQPDL-------------VTYGAVINGLCK 227
Query: 188 SGRRSEALRLFRESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPL 243
G AL L + + A + +I GL + + DAF F KM +GI D
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK-PDVF 286
Query: 244 VLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM 303
+ ++ N W ++ ++ + NAL+D + K LV A+ ++ EM
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 304 SRK-----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGL 358
+ DVV++ ++I G ++ + EE + ++ +M + N VT+ LI+
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 359 VSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWA 415
+ +F+ MV D G+ P + Y LLD +G+++ A + M + D T+
Sbjct: 407 CDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 416 ALLSA-CK 422
++ A CK
Sbjct: 466 TMIEALCK 473
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 157/400 (39%), Gaps = 83/400 (20%)
Query: 19 RQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVS 74
R P L L ++ K + NT++D K + DA LF+ + + D+ +
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 75 WASVLSA-CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHA 133
+ ++S CN + +S +L + PD F+ LI A V +GK V A
Sbjct: 288 YNPLISCLCNYGRWSDASRLLS-DMLEKNINPDLVFFNALIDA-------FVKEGKLVEA 339
Query: 134 HFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSE 193
L D++VKS K PD +++ +I G+ + R E
Sbjct: 340 EKLY-----DEMVKS-------KHCFPDV-------------VAYNTLIKGFCKYKRVEE 374
Query: 194 ALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV 249
+ +FRE + N +T LI G Q+ + +A F +M +G+ P +++
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV---HPDIMTY-- 429
Query: 250 GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD-- 307
N L+D ++ A +F M ++D
Sbjct: 430 -------------------------------NILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 308 --VVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
+V++T++I + G+ E+ L+ + VKPN VT+ ++ GL + AL
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
F M ED G P+ Y L+ R G + LI+ M
Sbjct: 519 FVEMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 15/261 (5%)
Query: 190 RRSEALRLF----RESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVL 245
+ +A+ LF + P+ ++ ++ L+S + + N D + + Q + I+ L
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQN-LGISHNLYT 112
Query: 246 SSV-VGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYA---KCSDLVAAKYIFC 301
S+ + + L + G ++ LGY + N+L++ + + S+ VA
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 302 EMS-RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVS 360
EM + D V++T+++ G QH +A EA+AL + MV +P+ VT+ +I G
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 361 KGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAAL 417
L M E I+ + Y ++D + H+D+A +L M + PD T+ L
Sbjct: 233 LALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 418 LSACKHHGNTQMAVRIADKLL 438
+S ++G A R+ +L
Sbjct: 292 ISCLCNYGRWSDASRLLSDML 312
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 177/448 (39%), Gaps = 59/448 (13%)
Query: 45 NTLLDAYGKCGL-LQDALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLL 99
N +LD +GK G + L + D + + D + ++VLSAC L A L
Sbjct: 249 NVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
G++P ++ L++ G + V + D V + LV Y + G
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGV--YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 160 PDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLF----RESPYKNLFAWTA 211
V + ++ N+I++T +I Y ++G+ EAL+LF N + A
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 212 LISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
++S L + + M+ G + + ++++ C N + + +V +
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCS-PNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKD----VVSWTSIIVGTAQHGQAEEA 327
G+E N L+ Y +C V A ++ EM+R V ++ +++ A+ G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVG----------------------------LV 359
+ DM S KP E ++ L+ C G L+
Sbjct: 546 ENVISDMKSKGFKPTETSY-SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 360 S--KGRALFRS-----MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL---IRTMPVSP 409
+ K RAL S + + +G KP + + +L +F+R+ D+AE + IR +SP
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 410 DEPTWAALLSACKHHGNTQMAVRIADKL 437
D T+ +L+ G A I L
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 14/273 (5%)
Query: 173 LNSISWTAMISGYARSGRRSEALRLFRE----SPYKNLFAWTALISGLVQSGNGVDAFYT 228
L+ ++T ++ Y+R+G+ +A+ LF P L + ++ + G
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 229 FV-KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMY 287
+ +MR +G+ D S+V+ ACA + K+ + GYE NAL+ ++
Sbjct: 268 VLDEMRSKGLKF-DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVF 326
Query: 288 AKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNE 343
K A + EM D V++ ++ + G ++EA + + M V PN
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNA 386
Query: 344 VTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIR 403
+T+ +I A G + LF SM E G P+ Y +L L + +E ++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKE-AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 404 TMP---VSPDEPTWAALLSACKHHGNTQMAVRI 433
M SP+ TW +L+ C + G + R+
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 182/437 (41%), Gaps = 37/437 (8%)
Query: 32 IIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLV----SWASVLSACNLANL 87
+ K G+ + T++DAYGK G +AL+LF ++ V ++ +VLS +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMG-PLHVNQGKQVHAHFLLSPYANDDVV 146
+ + + + G P+ ++T++ C N G VN +V + D
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN---RVFREMKSCGFEPDRDT 493
Query: 147 KSTLVDMYAKFG--------LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF 198
+TL+ Y + G + RA F++ + ++ A+++ AR G +
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT----TYNALLNALARKGDWRSGENVI 549
Query: 199 RESPYKNL----FAWTALISGLVQSGN--GVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
+ K +++ ++ + GN G++ +K EG ++L +++ A
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK---EGQIFPSWMLLRTLLLAN 606
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DV 308
++ L GY+ + I N+++ ++ + + A+ I + D+
Sbjct: 607 FKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDL 666
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
V++ S++ + G+ +A + + +++KP+ V++ +I GL+ + +
Sbjct: 667 VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKHHG 425
M E GI+P + Y + ++ G E E++I M + P+E T+ ++ G
Sbjct: 727 MTER-GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Query: 426 NTQMAVRIADKLLCLKP 442
A+ K+ P
Sbjct: 786 KYSEAMDFVSKIKTFDP 802
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 219/514 (42%), Gaps = 70/514 (13%)
Query: 6 HAYALKSQLSSVARQSPF-LTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
H Y + + S+ Q F ++L Q+++ GL + N L++ Y K G+++DA+ +
Sbjct: 359 HTYTV--LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 65 DTLPHRDLV----SWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANM 120
+ + R L ++ ++ +N+ H+A+ + +L + PD +++LI
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDG---- 471
Query: 121 GPLHVNQGKQVHAHFLLSPYANDDVVK-----STLVDMYAKFGLPDYGRAVFDSIS---- 171
G A+ LLS + +V ++++D K + +FDS+
Sbjct: 472 ---QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 172 SLNSISWTAMISGYARSGRRSEA----LRLFRESPYKNLFAWTALISGLVQSGNGVDAFY 227
+ N + +TA+I GY ++G+ EA ++ ++ N + ALI GL G +A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 228 TFVKMRQEGI--TIA-DPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALV 284
KM + G+ T++ D +++ ++ + +Q+ + G + +
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM----LSSGTKPDAHTYTTFI 644
Query: 285 DMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVK 340
Y + L+ A+ + +M D+ +++S+I G GQ A + M +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 341 PNEVTFVGLIY------------------ACSNVGLVSKGRALFRSMVEDYGIKPSLQHY 382
P++ TF+ LI A SN+ L MVE + + P+ + Y
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE-HSVTPNAKSY 763
Query: 383 TCLLDLFSRSGHLDEAENLI----RTMPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
L+ G+L AE + R +SP E + ALLS C A ++ D ++
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Query: 439 CLK--PEDPSSYILLSNVYA------GASMWENV 464
C+ P+ S +L+ +Y G S+++N+
Sbjct: 824 CVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 158/377 (41%), Gaps = 19/377 (5%)
Query: 90 RALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST 149
AL++ + + G +P+ ++ LI + + + +++ L + + +
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE--KARELLGQMLEKGLMPNVITYNA 398
Query: 150 LVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEA---LRLFRESP 202
L++ Y K G+ + V + + S N+ ++ +I GY +S ++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKV 458
Query: 203 YKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGK 262
++ + +LI G +SGN A+ M G+ + D +S++ + E
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL-VPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 263 QVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVV----SWTSIIVGT 318
+ + G V + AL+D Y K + A + +M K+ + ++ ++I G
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 319 AQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPS 378
G+ +EA L + MV ++P T LI+ G + F+ M+ G KP
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPD 636
Query: 379 LQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIAD 435
YT + + R G L +AE+++ M VSPD T+++L+ G T A +
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 436 KLLCLKPEDPSSYILLS 452
++ E PS + LS
Sbjct: 697 RMRDTGCE-PSQHTFLS 712
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 150/334 (44%), Gaps = 31/334 (9%)
Query: 110 FSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG----LPDYGRA 165
++TL+ + A G V++ KQV+ L + + +V+ Y K G Y
Sbjct: 186 YNTLLNSLARFG--LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 166 VFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGN 221
+ ++ + ++T++I GY + A ++F E P K N A+T LI GL +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 222 GVDAFYTFVKMRQEGI--TIADPLVL-SSVVGACANLAVWELGKQVHGLVIGLGYESCVF 278
+A FVKM+ + T+ VL S+ G+ L K++ G + +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME----ETGIKPNIH 359
Query: 279 ISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDM 334
L+D A+ + +M K +V+++ ++I G + G E+A+ + + M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 335 VSARVKPNEVTFVGLI--YACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
S ++ PN T+ LI Y SN V K + M+E + P + Y L+D RS
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN---VHKAMGVLNKMLE-RKVLPDVVTYNSLIDGQCRS 475
Query: 393 GHLDEAENLIRTMP---VSPDEPTWAALL-SACK 422
G+ D A L+ M + PD+ T+ +++ S CK
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 246 SSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSR 305
++++ + A + + KQV+ ++ ++ N +V+ Y K ++ A ++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 306 K----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
D ++TS+I+G Q + A ++++M + NEV + LI+ + +
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 362 GRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALL 418
LF M +D P+++ YT L+ S EA NL++ M + P+ T+ L+
Sbjct: 307 AMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 419 ----SACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLM 471
S CK ++ ++ +K L + +Y L N Y M E+ V +LM
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLM---PNVITYNALINGYCKRGMIEDAVDVVELM 419
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 188/446 (42%), Gaps = 36/446 (8%)
Query: 28 LHAQIIKSGLSQHEPFPNT-----LLDAYGKCGLLQDALQLFDTL-----PHRDLVSWAS 77
L +++KS PFP+ LL A K + L + + PH
Sbjct: 68 LFGEMVKS-----RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 78 VLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLL 137
+ C + LP AL++ ++ G++P+ S+L+ + +++ + +
Sbjct: 123 INCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSSLLNGYCH--SKRISEAVALVDQMFV 179
Query: 138 SPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNS----ISWTAMISGYARSGRRSE 193
+ Y + V +TL+ A+ D + + +++ +++G + G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 194 ALRLFRESPYKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV 249
A L + L + +I GL + + DA F +M +GI + + SS++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR-PNVVTYSSLI 298
Query: 250 GACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV- 308
N W ++ +I VF +AL+D + K LV A+ ++ EM ++ +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 309 ---VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRAL 365
V+++S+I G H + +EA +++ MVS P+ VT+ LI V +G +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 366 FRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACK 422
FR M + G+ + Y L+ ++G D A+ + + M V P+ T+ LL
Sbjct: 419 FREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 423 HHGNTQMAVRIADKLLCLKPEDPSSY 448
+G + A+ + + L K E P+ Y
Sbjct: 478 KNGKLEKAMVVFEYLQRSKME-PTIY 502
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 160/374 (42%), Gaps = 49/374 (13%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSA-CNLANLPHRALSISRSLL 99
NT++D K + DAL LF + + ++V+++S++S CN + +S ++
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS-DMI 318
Query: 100 HQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL 159
+ PD F FS LI A V +GK V A L D++VK
Sbjct: 319 ERKINPDVFTFSALIDA-------FVKEGKLVEAEKLY-----DEMVK------------ 354
Query: 160 PDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLF----AWTALISG 215
R++ SI ++++++I+G+ R EA ++F K+ F + LI G
Sbjct: 355 ----RSIDPSI-----VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 216 LVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYES 275
+ + F +M Q G+ + + + + ++ ++ +++ ++ G
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGL-VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 276 CVFISNALVDMYAKCSDLVAAKYIFCEMSRKD----VVSWTSIIVGTAQHGQAEEALALY 331
+ N L+D K L A +F + R + ++ +I G + G+ E+ L+
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 332 DDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSR 391
++ VKP+ V + +I G + ALF+ M ED G P+ Y L+ R
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPNSGCYNTLIRARLR 583
Query: 392 SGHLDEAENLIRTM 405
G + + LI+ M
Sbjct: 584 DGDREASAELIKEM 597
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 154/357 (43%), Gaps = 29/357 (8%)
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKST-----LVDMYA 155
+G +P+ + ++T+I A +V Q +L D VV + L+++
Sbjct: 253 KGIKPEAYTYNTIINA-------YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 156 KFGLPDYGRAVFDSISSLNSIS----WTAMISGYARSGRRSEALRLFRESPYKNL----F 207
K G +FD + S +T++IS R G A LF E K L +
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 208 AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGL 267
+ ALI G+ + G A +M+ +G+ I + + + G C V E ++ +
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE-ASMIYDV 424
Query: 268 VIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV----VSWTSIIVGTAQHGQ 323
+ G+++ VF N + + + AK M V VS+T++I + G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 324 AEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYT 383
EEA L+ +M S V+PN +T+ +IYA G + + R L R+ +E G+ P YT
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL-RANMEANGMDPDSYTYT 543
Query: 384 CLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIADKL 437
L+ + ++DEA L M + + T+ ++S G + A + D++
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 157/348 (45%), Gaps = 24/348 (6%)
Query: 6 HAYALKSQLSSVARQSPFLTKKLHAQIIKS-GLSQHEPFPNTLLDAYGKCGLLQDALQLF 64
AY + +++ +Q F + +++K G+ ++ L++ K G + DA +LF
Sbjct: 258 EAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLF 317
Query: 65 DTLPHRDLVS----WASVLS-ACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACAN 119
D + R + S + S++S C N+ RA + L +G P + + LI
Sbjct: 318 DEMRERGIESDVHVYTSLISWNCRKGNM-KRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 120 MGPLHVNQGKQVHAHFLLSPYAN-DDVVKSTLVDMYAKFGLPDYGRAVFDSIS----SLN 174
+G + ++ + + S N VV +TL+D Y + G+ D ++D + +
Sbjct: 377 VGEMG---AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 175 SISWTAMISGYARSGRRSEALR-LFR--ESPYK-NLFAWTALISGLVQSGNGVDAFYTFV 230
+ + S + R R EA + LFR E K + ++T LI + GN +A FV
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 231 KMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKC 290
+M +G+ + + + ++ A + +++ + G + + +L+
Sbjct: 494 EMSSKGVQ-PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 291 SDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEALALYDDM 334
++ A +F EM K + V++T +I G ++ G+++EA LYD+M
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACN 83
L ++ G++ + NTL+D Y + G++ +A ++D + + D+ + ++ S N
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
Query: 84 LANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAND 143
A ++ G + ++ LI G +V + K++ +
Sbjct: 446 RLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG--NVEEAKRLFVEMSSKGVQPN 503
Query: 144 DVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLFR 199
+ + ++ Y K G R + ++ + +S ++T++I G + EA+RLF
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 200 ESPYKNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA 251
E K L +T +ISGL ++G +AF + +M+++G TI D V ++++G+
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI-DNKVYTALIGS 618
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 194/480 (40%), Gaps = 64/480 (13%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSACNLANLPHRALSISRSLLH 100
+TL+D Y K G+L +LF H+ D+V ++S + + A + + +L
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 101 QGFQPDHFVFSTLIKACANMGPLH---------------------------------VNQ 127
QG P+ ++ LIK G ++ +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 128 GKQVHAHFLLSPYANDDVVKSTLVDMYAKFGL----PDYGRAVFDSISSLNSISWTAMIS 183
G ++ + Y D V+ LVD +K GL + + LN + + ++I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 184 GYARSGRRSEALRLFR----ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
G+ R R EAL++FR ++ +T ++ + G +A + F +M + G+
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE- 563
Query: 240 ADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYI 299
D L +++ A +G Q+ L+ + + + N ++ + KC + A
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 300 FCEM----SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA-CS 354
F + D+V++ ++I G + +EA +++ + PN VT LI+ C
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDE 411
N + R S++ + G KP+ Y CL+D FS+S ++ + L M +SP
Sbjct: 684 NNDMDGAIRMF--SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741
Query: 412 PTWAALLSACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLM 471
+++ ++ G A I + + K LL +V A A + KV +L+
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAK--------LLPDVVAYAILIRGYCKVGRLV 793
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 190/475 (40%), Gaps = 62/475 (13%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
KL +Q + G+ ++ +D Y K G L A ++ + + ++V++ ++
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+ A + +L +G +P +S+LI G L G ++ + Y
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR--SGFALYEDMIKMGYPP 459
Query: 143 DDVVKSTLVDMYAKFGLP----DYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF 198
D V+ LVD +K GL + + LN + + ++I G+ R R EAL++F
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 199 R----ESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
R ++ +T ++ + G +A + F +M + G+ D L +++ A
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE-PDALAYCTLIDAFCK 578
Query: 255 LAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEM----SRKDVVS 310
+G Q+ L+ + + + N ++ + KC + A F + D+V+
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 311 WTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYA-CSNVGLVSKGRALFRSM 369
+ ++I G + +EA +++ + PN VT LI+ C N + R S+
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF--SI 696
Query: 370 VEDYGIKPSLQHYTCLLDLFSRS-----------------------------------GH 394
+ + G KP+ Y CL+D FS+S G
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 756
Query: 395 LDEAENLIRT---MPVSPDEPTWAALLSACKHHGNTQMAVRIADKLL--CLKPED 444
+DEA N+ + PD +A L+ G A + + +L +KP+D
Sbjct: 757 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 173/422 (40%), Gaps = 56/422 (13%)
Query: 63 LFDTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGP 122
+ D P ++V++ ++++ RA + + + +G +PD +STLI G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 123 LHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG-----LPDYGRAVFDSISSLNSIS 177
L G ++ + L D VV S+ +D+Y K G Y R + IS N ++
Sbjct: 337 L--GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-NVVT 393
Query: 178 WTAMISGYARSGRRSEAL----RLFRESPYKNLFAWTALISGLVQSGNGVDAFYTFVKMR 233
+T +I G + GR EA ++ + ++ +++LI G + GN F + M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 234 QEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDL 293
+ G D ++ +V + + + ++G V + N+L+D + + +
Sbjct: 454 KMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 294 VAAKYIFCEMS----RKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGL 349
A +F M + DV ++T+++ + G+ EEAL L+ M ++P+ + + L
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 350 IYA-CS----NVGL------------------------------VSKGRALFRSMVEDYG 374
I A C +GL + F +++E
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG-K 631
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAE---NLIRTMPVSPDEPTWAALLSACKHHGNTQMAV 431
++P + Y ++ + LDEAE L++ P P+ T L+ + + A+
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 432 RI 433
R+
Sbjct: 692 RM 693
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 181/433 (41%), Gaps = 38/433 (8%)
Query: 9 ALKSQLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP 68
A+ Q+ SV +L +++ Q G E +++ Y + GL + A+++F +
Sbjct: 87 AMDGQVDSVQ----YLLQQMKLQ----GFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138
Query: 69 H----RDLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKA-CANMGPL 123
+ + VL N + R + GF+P+ F ++ L+KA C N
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN--- 195
Query: 124 HVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMIS 183
V+ K++ D V +T++ + GL GR + + + S+ + A+I+
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV-YNALIN 254
Query: 184 GYARSGRRSEALRLFRESPYK----NLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
G + A L RE K N+ +++ LI+ L SG AF +M + G
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH- 313
Query: 240 ADPLVLSSVVGAC----ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVA 295
+ LSS+V C +L Q ++ G G + V N LV + ++V
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQ---MIRGFGLQPNVVAYNTLVQGFCSHGNIVK 370
Query: 296 AKYIFCEMSR----KDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIY 351
A +F M ++ ++ S+I G A+ G + A+ +++ M+++ PN V + ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 352 ACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP----V 407
A + +L M ++ PS+ + + +G LD AE + R M
Sbjct: 431 ALCRHSKFKEAESLIEIMSKE-NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 408 SPDEPTWAALLSA 420
P+ T+ LL
Sbjct: 490 PPNIVTYNELLDG 502
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 171/439 (38%), Gaps = 59/439 (13%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLA 85
KKL ++ G T++ + + GL+++ +L + V A + C
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEH 260
Query: 86 NLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHV-----NQGKQVHAH---FLL 137
+ A + R ++ +G P+ +STLI N G + + Q + H + L
Sbjct: 261 DYKG-AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTL 319
Query: 138 SPYANDDVVKSTLVD-------MYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGR 190
S ++ T D M FGL N +++ ++ G+ G
Sbjct: 320 SSLVKGCFLRGTTFDALDLWNQMIRGFGLQP------------NVVAYNTLVQGFCSHGN 367
Query: 191 RSEALRLFRE------SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLV 244
+A+ +F SP N+ + +LI+G + G+ A Y + KM G + +V
Sbjct: 368 IVKAVSVFSHMEEIGCSP--NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC-PNVVV 424
Query: 245 LSSVVGACANLAVWELGKQVHGLVIGLGYESC---VFISNALVDMYAKCSDLVAAKYIFC 301
+++V A + + K+ L+ + E+C V NA + L A+ +F
Sbjct: 425 YTNMVEALCRHSKF---KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 302 EMSRK-----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNV 356
+M ++ ++V++ ++ G A+ + EEA L ++ V+ + T+ L++ N
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 357 GLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLI----------RTMP 406
GL L M+ D G P ++ + + G + A ++ R
Sbjct: 542 GLPGIALQLVGKMMVD-GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Query: 407 VSPDEPTWAALLSACKHHG 425
+S W S C+ G
Sbjct: 601 ISYTNVIWGLCRSNCREDG 619
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEA 327
G+E VF N L+ K + + AK + EMS K D VS+T++I + G +E
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
L + R +P + LI L R MVE GI P++ Y+ L++
Sbjct: 236 REL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEK-GISPNVISYSTLIN 289
Query: 388 LFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVRIADKLL 438
+ SG ++ A + + M P+ T ++L+ C G T A+ + ++++
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 112/528 (21%), Positives = 217/528 (41%), Gaps = 50/528 (9%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
KL +++ ++G++ + NT++D G CG +A + + R L++++ ++
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
A A + + + +GF P+ V++ LI + G L N+ ++ + +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL--NKAIEIKDLMVSKGLSL 398
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLF 198
+TL+ Y K G D + + S+ N S+T++I ALR
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 199 RESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
E +N+ T LISGL + G A + + +G + + + G C
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-- 516
Query: 255 LAVWELGK-----QVHGLVIGLGYESCVFIS---NALVDMYAKCSDLVAAKYIFCEMSRK 306
E GK ++ ++G G CV N L+ L A EM ++
Sbjct: 517 ----EAGKLDEAFRIQKEILGRG---CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 307 ----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
D +++ +I G + EEA+ +DD + P+ T+ +I C +G
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLS 419
+ F M+ ++P+ Y L+ + RSG L A L M +SP+ T+ +L+
Sbjct: 630 QEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 420 ACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE 479
+ R+ + L E+ L NV+ ++ + K+ +++ V+ + +E
Sbjct: 689 G------MSIISRVEEAKLLF--EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 480 PGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDT 527
+ K ++ G + +D + +L EMR++G VPD+
Sbjct: 741 MHSKNVHPNKITYTVMIGGYA---RDGNVTEASRLLNEMREKGIVPDS 785
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 170/424 (40%), Gaps = 23/424 (5%)
Query: 32 IIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSACNLANL 87
++ GLS NTL+ Y K G +A +L + + + S+ SV+ +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
AL +L + P + +TLI G H ++ ++ FL + D
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK-H-SKALELWFQFLNKGFVVDTRTS 508
Query: 148 STLVDMYAKFGLPDYG----RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ L+ + G D + + ++ +S+ +ISG + EA E
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 204 KNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
+ L + ++ LI GL +A + ++ G+ + D S ++ C E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM-LPDVYTYSVMIDGCCKAERTE 627
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV----VSWTSII 315
G++ ++ + + N L+ Y + L A + +M K + ++TS+I
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G + + EEA L+++M ++PN + LI +G + K L R M +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-HSKNV 746
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVR 432
P+ YT ++ ++R G++ EA L+ M + PD T+ + G A +
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 433 IADK 436
+D+
Sbjct: 807 GSDE 810
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 275 SCVFISNALV--DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
+C + +LV + + KC + A + C+ DV +T+ I + G+ EEA+ L+
Sbjct: 228 TCNILLTSLVRANEFQKCCE---AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFS 284
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
M A V PN VTF +I G + MVE G++P+L Y+ L+ +R+
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-GMEPTLITYSILVKGLTRA 343
Query: 393 GHLDEAENLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE-DPSSY 448
+ +A +++ M P+ + L+ + G+ A+ I D ++ S+Y
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Query: 449 ILLSNVYAGASMWENVSKVRKLMM 472
L Y +N ++ K M+
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEML 427
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 112/528 (21%), Positives = 217/528 (41%), Gaps = 50/528 (9%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR----DLVSWASVLSAC 82
KL +++ ++G++ + NT++D G CG +A + + R L++++ ++
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
A A + + + +GF P+ V++ LI + G L N+ ++ + +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL--NKAIEIKDLMVSKGLSL 398
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALRLF 198
+TL+ Y K G D + + S+ N S+T++I ALR
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 199 RESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACAN 254
E +N+ T LISGL + G A + + +G + + + G C
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC-- 516
Query: 255 LAVWELGK-----QVHGLVIGLGYESCVFIS---NALVDMYAKCSDLVAAKYIFCEMSRK 306
E GK ++ ++G G CV N L+ L A EM ++
Sbjct: 517 ----EAGKLDEAFRIQKEILGRG---CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 307 ----DVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKG 362
D +++ +I G + EEA+ +DD + P+ T+ +I C +G
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 363 RALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLS 419
+ F M+ ++P+ Y L+ + RSG L A L M +SP+ T+ +L+
Sbjct: 630 QEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 420 ACKHHGNTQMAVRIADKLLCLKPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKE 479
+ R+ + L E+ L NV+ ++ + K+ +++ V+ + +E
Sbjct: 689 G------MSIISRVEEAKLLF--EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 480 PGYSCIDLGKESHVFYAGETSHPMKDEILGLMRKLDAEMRKRGYVPDT 527
+ K ++ G + +D + +L EMR++G VPD+
Sbjct: 741 MHSKNVHPNKITYTVMIGGYA---RDGNVTEASRLLNEMREKGIVPDS 785
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 170/424 (40%), Gaps = 23/424 (5%)
Query: 32 IIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLP----HRDLVSWASVLSACNLANL 87
++ GLS NTL+ Y K G +A +L + + + S+ SV+ +
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 88 PHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVK 147
AL +L + P + +TLI G H ++ ++ FL + D
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK-H-SKALELWFQFLNKGFVVDTRTS 508
Query: 148 STLVDMYAKFGLPDYG----RAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPY 203
+ L+ + G D + + ++ +S+ +ISG + EA E
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 204 KNL----FAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWE 259
+ L + ++ LI GL +A + ++ G+ + D S ++ C E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM-LPDVYTYSVMIDGCCKAERTE 627
Query: 260 LGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDV----VSWTSII 315
G++ ++ + + N L+ Y + L A + +M K + ++TS+I
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 316 VGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGI 375
G + + EEA L+++M ++PN + LI +G + K L R M +
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM-HSKNV 746
Query: 376 KPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALLSACKHHGNTQMAVR 432
P+ YT ++ ++R G++ EA L+ M + PD T+ + G A +
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 433 IADK 436
+D+
Sbjct: 807 GSDE 810
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 275 SCVFISNALV--DMYAKCSDLVAAKYIFCEMSRKDVVSWTSIIVGTAQHGQAEEALALYD 332
+C + +LV + + KC + A + C+ DV +T+ I + G+ EEA+ L+
Sbjct: 228 TCNILLTSLVRANEFQKCCE---AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFS 284
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
M A V PN VTF +I G + MVE G++P+L Y+ L+ +R+
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVER-GMEPTLITYSILVKGLTRA 343
Query: 393 GHLDEAENLIRTMP---VSPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKPE-DPSSY 448
+ +A +++ M P+ + L+ + G+ A+ I D ++ S+Y
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403
Query: 449 ILLSNVYAGASMWENVSKVRKLMM 472
L Y +N ++ K M+
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEML 427
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 178/409 (43%), Gaps = 31/409 (7%)
Query: 49 DAYGKC---GLLQDALQLFDTLPHRDLVSW-----ASVLSACNLANLPHRALSISRSLLH 100
DAY + G ++D + L + L RDL+ AS AC A ++ +L+
Sbjct: 405 DAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILN 464
Query: 101 QGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLP 160
P F+ L+ CA+ + +G V S D + +TL+ AK G
Sbjct: 465 ----PTMSTFNMLMSVCASSQDIEGARG--VLRLVQESGMTADCKLYTTLISSCAKSGKV 518
Query: 161 DYGRAVFDSISS----LNSISWTAMISGYARSGRRSEALRLFRESPYKNL----FAWTAL 212
D VF +S+ N ++ A+I G AR+G+ ++A + KN+ + AL
Sbjct: 519 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 213 ISGLVQSGNGVDAFYTFVKMRQEGITI-ADPLVLSSVVGACANLAVWELGKQVHGLVIGL 271
IS QSG AF +M+ E I D + + +++ AC N E K+V+ ++
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 272 GYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRKDVVS---WTSIIVGTAQHGQA-EEA 327
G + V+ +K D A I+ +M KDV + S ++ A H + +EA
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 328 LALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLD 387
+ D S ++ +++ L+ AC N K L+ ++ ++P++ L+
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK-IKSIKLRPTISTMNALIT 757
Query: 388 LFSRSGHLDEAE---NLIRTMPVSPDEPTWAALLSACKHHGNTQMAVRI 433
L +A + I+T+ + P+ T++ L+ A + + +++ ++
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKL 806
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 188/435 (43%), Gaps = 31/435 (7%)
Query: 45 NTLLDAYGKCGLLQDALQLFDTLPHR---DLVSWASVLSACNLANLPHRALSISRSLLHQ 101
NT++ YG G L + L T+ D ++ ++S N RA + + +
Sbjct: 337 NTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDD 396
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDV-----VKSTLVDMYAK 156
G +PD + TL+ A + + +G L++ +D+V +S L MY +
Sbjct: 397 GLKPDPVSYRTLLYAFSIRHMVEEAEG-------LIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 157 FGLPDYGRAVFDSI---SSLNSISWTAMISGYARSGRRSEALRLF---RESPYKNLFAWT 210
+ + + F +++S ++A I Y G SEA R+F +E + + +
Sbjct: 450 AEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYN 509
Query: 211 ALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIG 270
+I S + A F M G+T D +++V A+ + G+ +
Sbjct: 510 VMIKAYGISKSCEKACELFESMMSYGVT-PDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 271 LGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS----RKDVVSWTSIIVGTAQHGQAEE 326
GY S A++ + K L A+ ++ EM DVV + +I A G ++
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 327 ALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIK--PSLQHYTC 384
A++ + M A + N V + LI + VG + + A++R +++ P + C
Sbjct: 629 AMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC 688
Query: 385 LLDLFSRSGHLDEAENLIRTMPV--SPDEPTWAALLSACKHHGNTQMAVRIADKLLCLKP 442
+++L+S + +AE + +M +E T+A +L K +G + A +IA ++ +K
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKI 748
Query: 443 -EDPSSYILLSNVYA 456
DP SY + ++A
Sbjct: 749 LTDPLSYNSVLGLFA 763
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 144/331 (43%), Gaps = 20/331 (6%)
Query: 48 LDAYGKCGLLQDALQLF---DTLPHRDLVSWASVLSACNLANLPHRALSISRSLLHQGFQ 104
+DAYG+ G L +A ++F + R ++ + ++ A ++ +A + S++ G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 105 PDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPDYGR 164
PD ++TL++ A+ H +G+ + Y +D + ++ + K G +
Sbjct: 538 PDKCTYNTLVQILASADMPH--KGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 165 AVFDSISSLN----SISWTAMISGYARSGRRSEAL---RLFRESPYK-NLFAWTALISGL 216
V+ + N + + +I+ +A +G +A+ +E+ N + +LI
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSS--VVGACANLAVWELGKQVHGLVIGLGYE 274
+ G +A + K+ Q P V +S ++ + ++ + + + G E
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-E 714
Query: 275 SCVFISNALVDMYAKCSDLVAAKYIFCEMSR----KDVVSWTSIIVGTAQHGQAEEALAL 330
+ F ++ MY K A I +M D +S+ S++ A G+ +EA+
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 331 YDDMVSARVKPNEVTFVGLIYACSNVGLVSK 361
+ +MVS+ ++P++ TF L +G+ K
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGTILMKLGMSKK 805
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 161/392 (41%), Gaps = 48/392 (12%)
Query: 27 KLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSACNLAN 86
++ Q+++ G S N ++ + K G ++DAL + ++D
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD--------------- 289
Query: 87 LPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVV 146
GF PD + F+TL+ G HV ++ L Y D
Sbjct: 290 ---------------GFFPDQYTFNTLVNGLCKAG--HVKHAIEIMDVMLQEGYDPDVYT 332
Query: 147 KSTLVDMYAKFGLPDYGRAVFDSI----SSLNSISWTAMISGYARSGRRSEALRLFRESP 202
++++ K G V D + S N++++ +IS + + EA L R
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 203 YKNLF----AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGA-CANLAV 257
K + + +LI GL + N A F +MR +G D + ++ + C+ +
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE-PDEFTYNMLIDSLCSKGKL 451
Query: 258 WELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMS----RKDVVSWTS 313
E + + + G V N L+D + K + A+ IF EM ++ V++ +
Sbjct: 452 DEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 314 IIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDY 373
+I G + + E+A L D M+ KP++ T+ L+ G + K + ++M +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN- 569
Query: 374 GIKPSLQHYTCLLDLFSRSGHLDEAENLIRTM 405
G +P + Y L+ ++G ++ A L+R++
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 122/316 (38%), Gaps = 44/316 (13%)
Query: 102 GFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFGLPD 161
G +PD F+ LIKA + Q+ L+ L DM P
Sbjct: 184 GIKPDVSTFNVLIKALC--------RAHQLRPAILM------------LEDM------PS 217
Query: 162 YGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNLFAWT-----ALISGL 216
YG + ++T ++ GY G ALR+ RE + +W+ ++ G
Sbjct: 218 YGLVP-------DEKTFTTVMQGYIEEGDLDGALRI-REQMVEFGCSWSNVSVNVIVHGF 269
Query: 217 VQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVWELGKQVHGLVIGLGYESC 276
+ G DA +M + D +++V + ++ +++ GY+
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 277 VFISNALVDMYAKCSDLVAAKYIFCEMSRKD----VVSWTSIIVGTAQHGQAEEALALYD 332
V+ N+++ K ++ A + +M +D V++ ++I + Q EEA L
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 333 DMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRS 392
+ S + P+ TF LI LF M G +P Y L+D
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSK 448
Query: 393 GHLDEAENLIRTMPVS 408
G LDEA N+++ M +S
Sbjct: 449 GKLDEALNMLKQMELS 464
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 191/463 (41%), Gaps = 34/463 (7%)
Query: 13 QLSSVARQSPFLTKKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHR-- 70
+LS V + + H +I S N L+D K + DA QLFD + R
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVF-----IYNVLIDGLCKGKRMNDAEQLFDEMLARRL 245
Query: 71 --DLVSWASVLSACNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQG 128
L+++ +++ A P ++ + + +P F+TL+K G V
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG--MVEDA 303
Query: 129 KQVHAHFLLSPYANDDVVKSTLVDMY-----AKFGLPDYGRAVFDSISSLNSISWTAMIS 183
+ V + D S L D Y A+ L Y AV DS +N+ + + +++
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV-DSGVKMNAYTCSILLN 362
Query: 184 GYARSGRRSEALRLFRESPYKNLFA----WTALISGLVQSGNGVDAFYTFVKMRQEGITI 239
+ G+ +A + K L + +I G + G+ V A M ++G+
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK- 421
Query: 240 ADPLVLSSVVGACANLAVWELG-KQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKY 298
D L + ++ L E K+V+ + + G V N L+ Y + +
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLK-GVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 299 IFCEM----SRKDVVSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACS 354
I EM + +VVS+ ++I + + EA + DM V P + LI C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 355 NVGLVSKGRALFRSMVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENL---IRTMPVSPDE 411
+ G + + M++ GI+ +L Y L+D S +G L EAE+L I + PD
Sbjct: 541 SKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 412 PTWAALLSACKHHGNTQMAVRIADKLL--CLKPEDPSSYILLS 452
T+ +L+S GN Q + + +++ +KP + ++L+S
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 168/407 (41%), Gaps = 56/407 (13%)
Query: 28 LHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTLPHRDLVSWASVLSA-----C 82
++ + SG+ + + LL+A K G ++ A ++ + LV + + C
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 83 NLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYAN 142
+L + I ++ QG +PDH ++ LI+ +G + N K+V+ L
Sbjct: 401 RKGDLVGARMKIE-AMEKQGMKPDHLAYNCLIRRFCELGEME-NAEKEVNKMKL------ 452
Query: 143 DDVVKSTLVDMYAKFGLPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRE-- 200
+ V S+ + N +I GY R + + +E
Sbjct: 453 ---------------------KGVSPSVETYN-----ILIGGYGRKYEFDKCFDILKEME 486
Query: 201 --SPYKNLFAWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGACANLAVW 258
N+ ++ LI+ L + ++A M G++ + + ++ C +
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS-PKVRIYNMLIDGCCSKGKI 545
Query: 259 ELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSI 314
E + ++ G E + N L+D + L A+ + E+SRK DV ++ S+
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 315 IVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYG 374
I G G + +ALY++M + +KP T+ LI C+ G+ R LF M
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER-LFGEM----S 660
Query: 375 IKPSLQHYTCLLDLFSRSGHLDEAENLIRTM---PVSPDEPTWAALL 418
+KP L Y +L ++ G +++A NL + M + D+ T+ +L+
Sbjct: 661 LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 133/318 (41%), Gaps = 58/318 (18%)
Query: 45 NTLLDAYG------KCGLLQDALQLFDTLPHRDLVSWASVLSACNLANLPHRALSISRSL 98
N L+ YG KC + ++ T+P+ +VS+ ++++ + A + R +
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPN--VVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 99 LHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG 158
+G P +++ LI C + G + +D +
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKI-------------------EDAFR----------- 550
Query: 159 LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLFRESPYKNL----FAWTALIS 214
+ + + LN +++ +I G + +G+ SEA L E K L F + +LIS
Sbjct: 551 ---FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSS--VVGACANLAVWELGKQVHGLVIGLG 272
G +GN + +M++ GI P + + ++ C + EL +++ G +
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIK---PTLKTYHLLISLCTKEGI-ELTERLFG---EMS 660
Query: 273 YESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAEEAL 328
+ + + N ++ YA D+ A + +M K D ++ S+I+G + G+ E
Sbjct: 661 LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR 720
Query: 329 ALYDDMVSARVKPNEVTF 346
+L D+M + ++P T+
Sbjct: 721 SLIDEMNAREMEPEADTY 738
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 206/506 (40%), Gaps = 50/506 (9%)
Query: 48 LDAYGKCGLLQDALQLFDTLPHRD----LVSWASVLSACNLANLPHRALSISRSLLHQGF 103
+ YG+ G +Q+A+ +F+ + D + S+ +++S + +A + + +G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 104 QPDHFVFSTLIKACANMGPLH-----VNQGKQVHAHFLLSPYANDDVVKSTLVDMYAKFG 158
PD + F+ +K+ H +N + Y VV + + G
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT--VVGGFYEENFKAEG 200
Query: 159 LPDYGRAVFDSISSLNSISWTAMISGYARSGRRSEALRLF----RESPYKNLFAWTALIS 214
+G+ + +S S ++ ++ + G E +L + NLF + I
Sbjct: 201 YELFGKMLASGVSLCLS-TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ 259
Query: 215 GLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVV-GACANLAVWE----LGKQVHGLVI 269
GL Q G +D V E D + ++++ G C N E LGK V+
Sbjct: 260 GLCQRGE-LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE--- 315
Query: 270 GLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DVVSWTSIIVGTAQHGQAE 325
G E + N L+ Y K + A+ I + D ++ S+I G G+
Sbjct: 316 --GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 326 EALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRSMVEDYGIKPSLQHYTCL 385
ALAL+++ + +KPN + + LI SN G++ + L M E G+ P +Q + L
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNIL 432
Query: 386 LDLFSRSGHLDEAENLIRTMPVS---PDEPTWAALLSACKHHGNTQMAVRIADKLL--CL 440
++ + G + +A+ L++ M PD T+ L+ + A+ I D +L +
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 441 KPEDPSSYILLSNVYAGASMWENVSKVRKLMMVKEVKKEPGYSCIDLGKESHVFYAGETS 500
P D +Y L N S +E+V + K M+ K P ++ ES Y
Sbjct: 493 DP-DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA--PNLFTFNILLESLCRYR---- 545
Query: 501 HPMKDEILGLMRKLDAEMRKRGYVPD 526
DE LGL+ EM+ + PD
Sbjct: 546 --KLDEALGLLE----EMKNKSVNPD 565
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/428 (20%), Positives = 179/428 (41%), Gaps = 24/428 (5%)
Query: 26 KKLHAQIIKSGLSQHEPFPNTLLDAYGKCGLLQDALQLFDTL----PHRDLVSWASVLSA 81
+KL ++IK G+ + N + + G L A+++ L P D++++ +++
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 82 -CNLANLPHRALSISRSLLHQGFQPDHFVFSTLIKACANMGPLHVNQGKQVHAHFLLSPY 140
C + + + + ++++G +PD + ++TLI G V +++ + + +
Sbjct: 296 LCKNSKFQEAEVYLGK-MVNEGLEPDSYTYNTLIAGYCKGG--MVQLAERIVGDAVFNGF 352
Query: 141 ANDDVVKSTLVDMYAKFGLPDYGRAVFDSISSL----NSISWTAMISGYARSGRRSEALR 196
D +L+D G + A+F+ N I + +I G + G EA +
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 197 LFRESPYKNLF----AWTALISGLVQSGNGVDAFYTFVKMRQEGITIADPLVLSSVVGAC 252
L E K L + L++GL + G DA M +G D + ++
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY-FPDIFTFNILIHGY 471
Query: 253 ANLAVWELGKQVHGLVIGLGYESCVFISNALVDMYAKCSDLVAAKYIFCEMSRK----DV 308
+ E ++ +++ G + V+ N+L++ K S + M K ++
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 309 VSWTSIIVGTAQHGQAEEALALYDDMVSARVKPNEVTFVGLIYACSNVGLVSKGRALFRS 368
++ ++ ++ + +EAL L ++M + V P+ VTF LI G + LFR
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 369 MVEDYGIKPSLQHYTCLLDLFSRSGHLDEAENLIRTMP---VSPDEPTWAALLSACKHHG 425
M E Y + S Y ++ F+ ++ AE L + M + PD T+ ++ G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 426 NTQMAVRI 433
N + +
Sbjct: 652 NVNLGYKF 659