Miyakogusa Predicted Gene

Lj6g3v0217000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0217000.1 Non Chatacterized Hit- tr|I1MN15|I1MN15_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43057
PE,70.79,0,UNCHARACTERIZED,NULL; seg,NULL; NUC153,NUC153;
coiled-coil,NULL,NODE_28261_length_2378_cov_50.870480.path2.1
         (710 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01160.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   310   3e-84

>AT3G01160.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cytosol, nucleus; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast
           hits to 21323 proteins in 1057 species: Archae - 109;
           Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants -
           1657; Viruses - 489; Other Eukaryotes - 13360 (source:
           NCBI BLink). | chr3:54655-57449 REVERSE LENGTH=713
          Length = 713

 Score =  310 bits (793), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 171/287 (59%), Positives = 203/287 (70%), Gaps = 6/287 (2%)

Query: 192 ETHRLAVVNMDWRYVKAVDLYVLLSSFVPPNGMIKSVTVYPSEFGIQRMKEEEVHGPV-- 249
           ETHRLA+VNMDWR+V A DLYV+L+SF+P +G I SV VYPSEFG++RMKEEE+HGPV  
Sbjct: 198 ETHRLAIVNMDWRHVSAKDLYVVLNSFLPKDGRILSVAVYPSEFGLERMKEEEIHGPVID 257

Query: 250 --GLFXXXXXXXXXXXXXXXXXXXKLRAYEKSRMRYYFAVVECESSTTAGYIYKECDGLE 307
                                   KLRAYE SR++YYFAV EC+SS TA Y+YK CDG+E
Sbjct: 258 GDKKNDASDDEDEEEEEDEDVINQKLRAYEISRLKYYFAVAECDSSATADYLYKSCDGIE 317

Query: 308 FLHSSNPLDLRFIPDDMEFKQPPRDVVTEAPANYECKDFYSRALQHSKVHLSWDEDEPLR 367
           F  SSN LDLRFIPD MEFK PPRD+ +EAPA YE  DF SRALQ SKV+LSWDEDEP R
Sbjct: 318 FERSSNKLDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQMSKVNLSWDEDEPHR 377

Query: 368 AKTLKRKFTDEQLAQMELKEFLTSDESESDGGED-NNETDDQPDKKEKKRDKYRAXXXXX 426
            KTL +KF  EQLA +E+KEFL SDES+SD  +D  NE  +Q  KK+KK+DKYRA     
Sbjct: 378 IKTLNQKFNPEQLANLEMKEFLASDESDSDEEDDLGNEVINQSKKKDKKKDKYRALIEAE 437

Query: 427 XXXXXXXXXXXV-QDMEVTFNTGLEDLSRHIMEKKDKKAETVWDAYL 472
                        QDMEVTFNTGLEDLS+ I++KKD ++E+VW+ YL
Sbjct: 438 DVDSDKDLEEENDQDMEVTFNTGLEDLSKEILKKKDNQSESVWETYL 484



 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 79/134 (58%), Gaps = 19/134 (14%)

Query: 550 DDKGTDTGLKGFNLKHKKGKGKNTENAIDEGKIPNSAYEDPRFAALYR-PDFAIDPTSPQ 608
           ++ G   GLKG+N+K K  KGK     I E KIP +  +DPRF+AL+  P +A+DPT PQ
Sbjct: 564 ENAGDGNGLKGYNIKRKAKKGKTD---ISEDKIPAAELDDPRFSALFSSPYYALDPTDPQ 620

Query: 609 FKWSASYARQLAQKQQKGHMEPPAEREPTKLPKGTQLPSDDSGMMQKGEEGLDVSKSKKD 668
           FK SA+YARQLA KQ+    E P   E  K PK  Q  + D  +            SKK+
Sbjct: 621 FKRSATYARQLALKQK----EDPKGHEDVKAPKEKQELNSDGNL-----------GSKKE 665

Query: 669 EYELSSLVKSIKMK 682
            +EL+S VKS+KMK
Sbjct: 666 RHELTSTVKSLKMK 679



 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/73 (49%), Positives = 45/73 (61%)

Query: 35  HGKAVIDDPRFSRVHTDPRFRDAPKRKTKVAIDSRFDRMFTEKNFLPSSAPIDKRGKPKN 94
            G  +I DPRFS  HTDP+FR   +R +KVAIDSRF  MF +K F   SAP+DKRGK + 
Sbjct: 26  EGNEMIKDPRFSSAHTDPKFRRMRRRDSKVAIDSRFQPMFNDKRFATGSAPVDKRGKRRT 85

Query: 95  NTNAASQLHHYYK 107
                  L  +Y+
Sbjct: 86  GGTGKDSLREFYR 98