Miyakogusa Predicted Gene
- Lj6g3v0216890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0216890.1 Non Chatacterized Hit- tr|G0QQ98|G0QQ98_ICHMG
Putative uncharacterized protein OS=Ichthyophthirius
m,40.74,5e-19,ATPASE, AAA FAMILY PROTEIN,NULL; AAA ATPASE,NULL; no
description,NULL; P-loop containing nucleoside
,NODE_29990_length_921_cov_139.524429.path2.1
(126 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 199 3e-52
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 199 3e-52
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 75 1e-14
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 75 1e-14
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 67 4e-12
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 62 1e-10
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 62 1e-10
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 62 1e-10
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 61 2e-10
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 61 2e-10
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 60 3e-10
AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosph... 58 2e-09
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 57 2e-09
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 57 4e-09
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 56 5e-09
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 54 3e-08
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 54 3e-08
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 50 3e-07
AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH pro... 50 5e-07
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 47 3e-06
AT1G62130.1 | Symbols: | AAA-type ATPase family protein | chr1:... 47 4e-06
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 47 4e-06
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 46 5e-06
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 46 6e-06
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 199 bits (507), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 109/126 (86%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
MLRRLEKRILVPLP+PEAR MFE L+P QP +E +P+D+LV ++EGYSGSDIR+LCKE
Sbjct: 268 MLRRLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEA 327
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADY 120
AMQPLRR ++ LE RED+VPE+ELPK+GPI PEDI AL NTRPSAHLHAH YDKFN DY
Sbjct: 328 AMQPLRRTLAILEDREDVVPEDELPKIGPILPEDIDRALSNTRPSAHLHAHLYDKFNDDY 387
Query: 121 GSQILQ 126
GSQIL+
Sbjct: 388 GSQILK 393
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 199 bits (507), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 109/126 (86%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
MLRRLEKRILVPLP+PEAR MFE L+P QP +E +P+D+LV ++EGYSGSDIR+LCKE
Sbjct: 259 MLRRLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEA 318
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYDKFNADY 120
AMQPLRR ++ LE RED+VPE+ELPK+GPI PEDI AL NTRPSAHLHAH YDKFN DY
Sbjct: 319 AMQPLRRTLAILEDREDVVPEDELPKIGPILPEDIDRALSNTRPSAHLHAHLYDKFNDDY 378
Query: 121 GSQILQ 126
GSQIL+
Sbjct: 379 GSQILK 384
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 13/127 (10%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEES-IPYDLLVNQTEGYSGSDIRLLCKE 59
+LRRL KRI VPLP+ R +F+ L QP S D +V +TEGYSGSD++ LC+E
Sbjct: 370 VLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEE 429
Query: 60 VAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKY---DKF 116
AM P+R L + + + KV +R +D + ++ RPS L K+ +++
Sbjct: 430 AAMMPIRELGAN-------ILTIQANKVRSLRYDDFRKSMAVIRPS--LSKSKWEELERW 480
Query: 117 NADYGSQ 123
N+++GS
Sbjct: 481 NSEFGSN 487
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 13/127 (10%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEES-IPYDLLVNQTEGYSGSDIRLLCKE 59
+LRRL KRI VPLP+ R +F+ L QP S D +V +TEGYSGSD++ LC+E
Sbjct: 374 VLRRLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEE 433
Query: 60 VAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKY---DKF 116
AM P+R L + + + KV +R +D + ++ RPS L K+ +++
Sbjct: 434 AAMMPIRELGAN-------ILTIQANKVRSLRYDDFRKSMAVIRPS--LSKSKWEELERW 484
Query: 117 NADYGSQ 123
N+++GS
Sbjct: 485 NSEFGSN 491
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +RI V LP+ E R+ + + L P+ E +D L +TEGYSGSD++ LC
Sbjct: 861 VIRRLPRRIYVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAA 920
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYD---KFN 117
A +P++ L+ E+ +D V P + P+ +D + PS A + K+N
Sbjct: 921 AYRPVQELLQ--EENKDSVTNAS-PDLRPLSLDDFIQSKAKVSPSVAYDATTMNELRKWN 977
Query: 118 ADYG 121
YG
Sbjct: 978 EQYG 981
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E R + LL + +E++ Y L TEGY+GSD++ LC
Sbjct: 675 IIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTA 734
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 735 AYRPVRELIQQ 745
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E R + LL + +E++ Y L TEGY+GSD++ LC
Sbjct: 672 IIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTA 731
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 732 AYRPVRELIQQ 742
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E R + LL + +E++ Y L TEGY+GSD++ LC
Sbjct: 677 IIRRFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTA 736
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 737 AYRPVRELIQQ 747
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +RI V LP+ E R+ + + L P+ E ++ L +TEGYSGSD++ LC
Sbjct: 871 VIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAA 930
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYD---KFN 117
A +P++ L L++ + E P + + +D + PS A + K+N
Sbjct: 931 AYRPVQEL---LQEEQKGARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWN 987
Query: 118 ADYG 121
YG
Sbjct: 988 EQYG 991
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +RI V LP+ E R+ + + L P+ E ++ L +TEGYSGSD++ LC
Sbjct: 849 VIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAA 908
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHKYD---KFN 117
A +P++ L+ Q EQ+ E P + + +D + PS A + K+N
Sbjct: 909 AYRPVQELL-QEEQKG--ARAEASPGLRSLSLDDFIQSKAKVSPSVAYDATTMNELRKWN 965
Query: 118 ADYG 121
YG
Sbjct: 966 EQYG 969
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDEESIP-YDLLVNQTEGYSGSDIRLLCKEVA 61
RR +KRI +PLPE +AR MF+ L P + P ++ L +TEG+SGSD+ + K+V
Sbjct: 288 RRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVKDVL 347
Query: 62 MQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKN 101
+P+R+ + + P+ GP P IQ +++
Sbjct: 348 FEPVRKTQDAMFFFKS--PDGTWMPCGPRHPGAIQTTMQD 385
>AT3G27120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:10000248-10003265
REVERSE LENGTH=476
Length = 476
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQ-----PDEESIPYDLLVNQTEGYSGSDIRLLC 57
RRL KR+ +PLP EAR + + LL D++ +++ N TEGYSGSD++ L
Sbjct: 355 RRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDD---MNIICNLTEGYSGSDMKNLV 411
Query: 58 KEVAMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAHLHAHK-YDKF 116
K+ M PLR + + +L ++ + + +D + AL+ RPS + Y+ +
Sbjct: 412 KDATMGPLREALKRGIDITNLTKDD----MRLVTLQDFKDALQEVRPSVSQNELGIYENW 467
Query: 117 NADYGS 122
N +GS
Sbjct: 468 NNQFGS 473
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E+R + LL + E ++ + L T+GYSGSD++ C
Sbjct: 674 IIRRFERRIMVGLPSVESREKILRTLLSKEKTE-NLDFQELAQMTDGYSGSDLKNFCTTA 732
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 733 AYRPVRELIKQ 743
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 3 RRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAM 62
RRLEKRI +PLP+ E+R A+ L + + + +TEGYSG D+ +C++ +M
Sbjct: 402 RRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASM 461
Query: 63 QPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDKFNADYG 121
+RR ++ + E ++ P+ D + A++ +PS + K++K+ +++G
Sbjct: 462 NGMRRKIAGKTRDEIKNMSKDDISNDPVAMCDFEEAIRKVQPSVSSSDIEKHEKWLSEFG 521
Query: 122 S 122
S
Sbjct: 522 S 522
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RR E+RI+V LP E+R + LL + E ++ + L TEGYSGSD++ LC
Sbjct: 673 IIRRFERRIMVGLPSIESREKILRTLLSKEKTE-NLDFHELGQITEGYSGSDLKNLCITA 731
Query: 61 AMQPLRRLMSQ 71
A +P+R L+ Q
Sbjct: 732 AYRPVRELIQQ 742
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + +L + E + + + N T+GYSGSD++ LC
Sbjct: 1073 VIRRLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTA 1132
Query: 61 AMQPLRRLMSQLEQREDLVPEEE 83
A P+R ++ + E++E V + E
Sbjct: 1133 AHLPIREILEK-EKKERSVAQAE 1154
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + +L + E + + + N T+GYSGSD++ LC
Sbjct: 1101 VIRRLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTA 1160
Query: 61 AMQPLRRLMSQLEQREDLVPEEE 83
A P+R ++ + E++E V + E
Sbjct: 1161 AHLPIREILEK-EKKERSVAQAE 1182
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + +L + + + + N T+GYSGSD++ LC
Sbjct: 1120 VIRRLPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTA 1179
Query: 61 AMQPLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSAH 107
A P+R ++ + ++ + E P D+++ N +AH
Sbjct: 1180 AHFPIREILEKEKKEKTAAQAENRPTPPLYSCTDVRSLTMNDFKAAH 1226
>AT1G79560.1 | Symbols: EMB156, EMB36, EMB1047, FTSH12 | FTSH
protease 12 | chr1:29926976-29932308 FORWARD LENGTH=1008
Length = 1008
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
R+++R+ + LP+ + RV +F + E I + LV +T G+SG+DIR L E A+
Sbjct: 657 RIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIM 716
Query: 64 PLRRLMSQLEQRE--DLVPEEELPKVGPIRPEDIQ 96
+R+ S + Q++ D++ ++ L +G + E+ Q
Sbjct: 717 SVRKGRSYIYQQDIVDVLDKQLLEGMGVLLTEEEQ 751
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL +R++V LP+ R + + +L + + + + T GYSGSD++ LC
Sbjct: 977 VIRRLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTA 1036
Query: 61 AMQPLRRLMSQLEQRE 76
A +P++ ++ + E+RE
Sbjct: 1037 AHRPIKEILEK-EKRE 1051
>AT1G62130.1 | Symbols: | AAA-type ATPase family protein |
chr1:22962365-22968920 REVERSE LENGTH=1043
Length = 1043
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
++RRL R++V LP+ +R + + +L + D + + T GYSG+D++ LC
Sbjct: 898 VIRRLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEVASMTNGYSGNDLKNLCVTA 957
Query: 61 AMQPLRRLMSQLE----QREDLVPEEELPKVGP-------IRPEDIQAALK---NTRPSA 106
A RR++ +E +R+ V E +P G ++ ED + AL+ + S
Sbjct: 958 AR---RRIIEIVEKEKSERDAAVAEGRVPPAGSGGSDLRVLKMEDFRNALELVSMSISSK 1014
Query: 107 HLHAHKYDKFNADYG 121
++ ++N DYG
Sbjct: 1015 SVNMTALRQWNEDYG 1029
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
RL++ I +PLP+ ++R+ +F+ L P + + L T+G+SG+DI +C+
Sbjct: 642 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKY 701
Query: 64 PLRRLMSQLEQRE-------DLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHAHKYDK 115
+R + + ++E + + E+ + +V I+ + ++K R S + KY
Sbjct: 702 AIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQA 761
Query: 116 F 116
F
Sbjct: 762 F 762
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
R ++ I + +P+ R+ + E + + + T GY G+D+ LC E A+Q
Sbjct: 365 RFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQ 424
Query: 64 PLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 106
+R M ++ +D + E L + + E AL N+ PSA
Sbjct: 425 CIREKMDVIDLEDDSIDAEILNSMA-VTNEHFHTALGNSNPSA 466
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
RL++ I +PLP+ ++R+ +F+ L P + + L T+G+SG+DI +C+
Sbjct: 641 RLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKY 700
Query: 64 PLRRLMS---QLEQR---------EDLVPEEELPKVGPIRPEDIQAALKNTRPS-AHLHA 110
+R + + E+R ED+V +E V IR + ++K R S +
Sbjct: 701 AIRENIEKDIENERRRSQNPEAMEEDMVDDE----VSEIRAAHFEESMKYARRSVSDADI 756
Query: 111 HKYDKF 116
KY F
Sbjct: 757 RKYQAF 762
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 4 RLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEVAMQ 63
R ++ I + +P+ R+ + E + + + T GY G+D+ LC E A+Q
Sbjct: 365 RFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQ 424
Query: 64 PLRRLMSQLEQREDLVPEEELPKVGPIRPEDIQAALKNTRPSA 106
+R M ++ +D + E L + + E AL N+ PSA
Sbjct: 425 CIREKMDVIDLEDDSIDAEILNSMA-VSNEHFHTALGNSNPSA 466
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 1 MLRRLEKRILVPLPEPEARVAMFEELLPPQPDEESIPYDLLVNQTEGYSGSDIRLLCKEV 60
+LRR + + +P+ + R + + +L + E I YD + E Y+GSDI LCK+
Sbjct: 243 ILRRFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKA 302
Query: 61 AMQPLRRLM 69
A P+R ++
Sbjct: 303 AYFPIREIL 311