Miyakogusa Predicted Gene
- Lj6g3v0184050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0184050.1 Non Chatacterized Hit- tr|F6I261|F6I261_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.35,1e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; PPR_2,P,CUFF.57775.1
(259 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 3e-84
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 8e-59
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 1e-58
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 2e-57
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 212 2e-55
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 8e-54
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 2e-53
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 205 3e-53
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 4e-53
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 202 2e-52
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 201 4e-52
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 201 5e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 2e-51
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 7e-51
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 7e-51
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 1e-50
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 196 1e-50
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 4e-50
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 5e-50
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 8e-50
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 8e-50
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 8e-50
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 193 1e-49
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 1e-49
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 192 1e-49
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 192 1e-49
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 2e-49
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 3e-49
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 191 3e-49
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 191 4e-49
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 4e-49
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 1e-48
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 3e-48
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 187 4e-48
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 4e-48
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 5e-48
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 7e-48
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 7e-48
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 9e-48
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 2e-47
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 2e-47
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 3e-47
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 4e-47
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 5e-47
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 184 6e-47
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 7e-47
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 1e-46
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 2e-46
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 181 6e-46
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 1e-45
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 1e-45
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 179 1e-45
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 2e-45
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 178 4e-45
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 177 7e-45
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 8e-45
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 1e-44
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 176 1e-44
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 176 1e-44
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 2e-44
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 3e-44
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 175 3e-44
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 4e-44
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 4e-44
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 174 6e-44
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 7e-44
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 8e-44
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 173 1e-43
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 1e-43
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 2e-43
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 5e-43
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 6e-43
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 9e-43
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 1e-42
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 3e-42
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 4e-42
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 167 5e-42
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 5e-42
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 6e-42
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 167 6e-42
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 7e-42
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 7e-42
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 2e-41
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 2e-41
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 4e-41
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 9e-41
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 163 1e-40
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 2e-40
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 3e-40
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 4e-40
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 4e-40
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 4e-40
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 4e-40
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 5e-40
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 5e-40
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 6e-40
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 7e-40
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 7e-40
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 8e-40
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 1e-39
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 1e-39
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 159 3e-39
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 3e-39
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 5e-39
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 7e-39
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 8e-39
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 1e-38
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 2e-38
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 2e-38
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 3e-38
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 5e-38
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 5e-38
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 5e-38
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 6e-38
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 2e-37
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 7e-37
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 7e-37
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 8e-37
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 3e-36
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 148 3e-36
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 4e-36
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 4e-36
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 5e-36
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 7e-36
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 1e-35
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 145 4e-35
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 144 4e-35
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 5e-35
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 5e-35
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 6e-35
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 6e-35
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 8e-35
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 8e-35
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 9e-35
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 2e-34
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 142 2e-34
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 6e-34
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 9e-34
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 138 4e-33
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 5e-33
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 7e-33
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 136 1e-32
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 2e-32
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 4e-32
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 6e-32
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 132 2e-31
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 5e-31
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 4e-30
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 8e-30
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 1e-29
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 7e-29
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 7e-28
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 6e-27
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 5e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 75 4e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 5e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 8e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 6e-11
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 7e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 63 2e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 62 3e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 62 5e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 7e-10
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 2e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 59 3e-09
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 58 6e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 58 6e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 7e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 8e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 58 8e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 9e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 57 2e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 56 3e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 4e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 4e-08
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 1e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 53 2e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 51 7e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 9e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 50 1e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 3e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 7e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 308 bits (788), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 141/248 (56%), Positives = 186/248 (75%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD F++VSLLT CAQ+GALE G+WIH Y+NENR+ VD VVGTAL+ MYA+ GC+E +
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
LEVF +KE+DTASWTS+I GLAMNG + +AL+L+ ME +G + D +TF+AVL+AC+H
Sbjct: 334 LEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHG 393
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G V EGRK+FHSM+ ++++P EH IDLL RAGLL EAEEL+ K+ ++DE +VP+
Sbjct: 394 GFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPV 453
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
Y +LLSA R YGN+ + ER+A L V+ +YASA+RWEDV VR KMKD
Sbjct: 454 YCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKD 513
Query: 250 LGIKKVPG 257
LGI+K PG
Sbjct: 514 LGIRKFPG 521
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+K D+ +VS L+ C+ LE G I+ +V + +G AL+ M+ + GC++K+
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 71 EVFNGLKEKDTASWTSIICGLA--------------------------MNG-----KTNK 99
VF+ +++K+ WTS++ G MNG + ++
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDE 262
Query: 100 ALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
ALELF M+T G +PD+ +++L+ C+ G +E+G K H + + + +
Sbjct: 263 ALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALV 321
Query: 160 DLLGRAGLLHEAEELVRKLPDQ 181
D+ + G + A E+ ++ ++
Sbjct: 322 DMYAKCGCIETALEVFYEIKER 343
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD F + +L + + G +H Y + + D+ V +L+ MYA G +E +
Sbjct: 41 GLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEIT 100
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
+VF+ + ++D SW +I NG+ A+ +F+ M + K D+ T ++ LSACS
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+E G +++ + + + M + + +D+ + G L +A + + D+ V
Sbjct: 161 LKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVFDSMRDKN----VK 214
Query: 189 LYRALLSACRTYGNID 204
+ +++ + G ID
Sbjct: 215 CWTSMVFGYVSTGRID 230
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 223 bits (569), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 161/247 (65%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+PD + + L+ CAQ GALE G+WIH Y+N+ RI +D+V+G LI MYA+ G +E++L
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
EVF +K+K +WT++I G A +G +A+ F M+ +G KP+ +TF AVL+ACS+ G
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LVEEG+ +F+SM Y++KP +EHYG +DLLGRAGLL EA+ ++++P + + +I +
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI---W 419
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALL ACR + NI++GE + L + I+A +W+ + R MK+
Sbjct: 420 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 479
Query: 251 GIKKVPG 257
G+ KVPG
Sbjct: 480 GVAKVPG 486
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G + D + V SL+ A +G + + D + E D V ++IK Y ++G ++
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP----DDVSWNSVIKGYVKAGKMDI 199
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+L +F + EK+ SWT++I G +AL+LF M+ +PD+V+ LSAC+
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G +E+G K HS + ++ + ID+ + G + EA E+ + + ++ V
Sbjct: 260 LGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS----VQ 314
Query: 189 LYRALLSACRTYGN 202
+ AL+S +G+
Sbjct: 315 AWTALISGYAYHGH 328
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 163/249 (65%), Gaps = 3/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD+F +VS+LT CA G+LE G WI Y+++N+I D VVG ALI MY + GC EK+
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKA 422
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ + ++D +WT+++ GLA NG+ +A+++F M+ + +PDD+T++ VLSAC+H+
Sbjct: 423 QKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHS 482
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G+V++ RK F M S + ++P+L HYG +D+LGRAGL+ EA E++RK+P + I+
Sbjct: 483 GMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIV--- 539
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL A R + + M E A + ++ IYA RW+D+ +VR K+ D
Sbjct: 540 WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVD 599
Query: 250 LGIKKVPGI 258
+ IKK PG
Sbjct: 600 VAIKKTPGF 608
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P ++ +L+ C++ + + +H+YV+E + + AL+ YA G ++ ++
Sbjct: 232 VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKT-------------------------------NK 99
+F +K +D SWTSI+ G G N+
Sbjct: 292 RIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNE 351
Query: 100 ALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
+LE+F M++ G PD+ T ++VL+AC+H G +E G + + +K ++ I
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALI 410
Query: 160 DLLGRAGLLHEAEELVRKLPDQTDEI 185
D+ + G +A+++ + DQ D+
Sbjct: 411 DMYFKCGCSEKAQKVFHDM-DQRDKF 435
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSG-ALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
GV PD LL + G AL G+ +H +V + + + V AL+KMY+ G ++
Sbjct: 129 GVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM 188
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ VF+ ++D SW +I G + +++EL ME P VT + VLSACS
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK 248
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ +++ H S +P+L ++ G + A + R +
Sbjct: 249 VKDKDLCKRV-HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 163/250 (65%), Gaps = 5/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD I+ S+L+ CA GA++HGRW+H+Y+ I D +GTA++ MYA+ G +E +
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
LE+FNG++ K+ +W +++ GLA++G ++L FE M LG KP+ VTF+A L+AC H
Sbjct: 361 LEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 130 GLVEEGRKLFHSMSST-YHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GLV+EGR+ FH M S Y++ P LEHYG IDLL RAGLL EA ELV+ +P + D V
Sbjct: 421 GLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPD---VR 477
Query: 189 LYRALLSACRTYGNI-DMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+ A+LSAC+ G + ++ + + + +++ I+A+ RW+DV ++R M
Sbjct: 478 ICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLM 537
Query: 248 KDLGIKKVPG 257
K GI KVPG
Sbjct: 538 KVKGISKVPG 547
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+P+ V +L + G L G+ IH + + ++ G ALI MY + + ++
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LGAKPDDVTFIAVLSACSHA 129
VF L++KD SW S+I GL ++ +A++LF M+T G KPD +VLSAC+
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G V+ GR + H T +K + +D+ + G + A E+ + + V
Sbjct: 320 GAVDHGRWV-HEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKN----VFT 374
Query: 190 YRALLSACRTYGN 202
+ ALL +G+
Sbjct: 375 WNALLGGLAIHGH 387
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 4/203 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G PD F + C + + G+ IH V + D V +L+ Y G +
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF + +D SWT II G G +AL+ F M+ +P+ T++ VL +
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRV 217
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G + G+ + H + +LE ID+ + L +A + +L + +
Sbjct: 218 GCLSLGKGI-HGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSM 276
Query: 190 YRALLSACRTYGNIDMGERLATT 212
L+ R+ ID+ + T+
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTS 299
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 160/247 (64%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++P+ +VS+L ++ G+LE G W+H Y ++ I +D V+G+ALI MY++ G +EK++
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF L ++ +W+++I G A++G+ A++ F M G +P DV +I +L+ACSH G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LVEEGR+ F M S ++P +EHYG +DLLGR+GLL EAEE + +P + D++I +
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI---W 446
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
+ALL ACR GN++MG+R+A L ++ +YAS W +V+++R +MK+
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 251 GIKKVPG 257
I+K PG
Sbjct: 507 DIRKDPG 513
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 46/217 (21%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG------ 64
V+P++F S+L CA++G ++ G+ IH + D V + L++MY G
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDAR 183
Query: 65 ------CVEKSLEV---------------------------------FNGLKEKDTASWT 85
+EK + V F+ ++++ SW
Sbjct: 184 VLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWN 243
Query: 86 SIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSST 145
++I G ++NG A+E+F M+ +P+ VT ++VL A S G +E G L H +
Sbjct: 244 TMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL-HLYAED 302
Query: 146 YHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
++ + ID+ + G++ +A + +LP +
Sbjct: 303 SGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 207 bits (526), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 149/237 (62%), Gaps = 3/237 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KPD F +VS+L+ CA G+L G W+H Y++++ I ++ + TAL+ MY++ G ++K+LE
Sbjct: 301 KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALE 360
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VF ++D ++W SII L+++G ALE+F M G KP+ +TFI VLSAC+H G+
Sbjct: 361 VFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGM 420
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
+++ RKLF MSS Y ++P +EHYG +DLLGR G + EAEELV ++P DE + L
Sbjct: 421 LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP--ADEASI-LLE 477
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+LL AC+ +G ++ ER+A L + +YAS RWE V R M+
Sbjct: 478 SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PDK+ +L CA E GR IH ++ ++ D V L+ +Y +SG E +
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIAR 195
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+V + + +D SW S++ G ++A LF+ ME + ++ ++S + AG
Sbjct: 196 KVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAG 251
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRK-LPDQTDEIIVPL 189
LV+E +++F SM ++ + + G +E E+ K L D T++
Sbjct: 252 LVKEAKEVFDSMPVR-----DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 190 YRALLSACRTYGNIDMGE 207
++LSAC + G++ GE
Sbjct: 307 LVSVLSACASLGSLSQGE 324
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 205 bits (521), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 157/248 (63%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV ++ ++VS+++ CA GALE G ++YV ++ + V+ ++GTAL+ M+ + G +EK+
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ VF GL E D+ SW+SII GLA++G +KA+ F M +LG P DVTF AVLSACSH
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLVE+G +++ +M + ++P LEHYG +D+LGRAG L EAE + K+ + + P+
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN---API 420
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
ALL AC+ Y N ++ ER+ L VK IYA A +W+ + +R MK+
Sbjct: 421 LGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Query: 250 LGIKKVPG 257
+KK PG
Sbjct: 481 KLVKKPPG 488
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D V T+++ Y + G VE + E+F+ + ++ +W+ +I G A N KA++LFE M+
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G ++ ++V+S+C+H G +E G + + + + HM NL +D+ R G +
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS-HMTVNLILGTALVDMFWRCGDI 300
Query: 169 HEAEELVRKLPDQTDEI 185
+A + LP +TD +
Sbjct: 301 EKAIHVFEGLP-ETDSL 316
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 153/247 (61%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
KPD+ ++ L+ C+Q GAL+ G WIH Y+ + + ++ +GT+L+ MYA+ G + ++L
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+G++ +++ ++T+II GLA++G + A+ F M G PD++TFI +LSAC H G
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
+++ GR F M S +++ P L+HY +DLLGRAGLL EA+ L+ +P + D + +
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV---W 561
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALL CR +GN+++GE+ A L + +Y A+ WED + R M +
Sbjct: 562 GALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNER 621
Query: 251 GIKKVPG 257
G++K+PG
Sbjct: 622 GVEKIPG 628
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GVKPD ++ L++ C+ G L G+ ++YV EN + + + AL+ M+++ G + ++
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNG-------------------------------KTN 98
+F+ L+++ SWT++I G A G +
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 99 KALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF 158
AL LF+ M+T KPD++T I LSACS G ++ G H Y + N+
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSLNVALGTSL 430
Query: 159 IDLLGRAGLLHEA 171
+D+ + G + EA
Sbjct: 431 VDMYAKCGNISEA 443
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD F L CA G I +V + R+ + + V A I M+A G +E + +
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VF+ +D SW +I G G+ KA+ +++ ME+ G KPDDVT I ++S+CS G
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
+ G++ F+ ++ + +D+ + G +HEA R++ D ++ + +
Sbjct: 273 LNRGKE-FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA----RRIFDNLEKRTIVSWT 327
Query: 192 ALLSACRTYGNIDMGERL 209
++S G +D+ +L
Sbjct: 328 TMISGYARCGLLDVSRKL 345
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 151/248 (60%), Gaps = 4/248 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KPD+ VV+ L+ C+Q GALE GRWIH +V +RI ++ V T LI MY++ G +E+++
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVLSACSHAG 130
VFN KD +W ++I G AM+G + AL LF M+ + G +P D+TFI L AC+HAG
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LV EG ++F SM Y +KP +EHYG + LLGRAG L A E ++ + D + L+
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSV---LW 432
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
++L +C+ +G+ +G+ +A L + IYAS +E V KVR+ MK+
Sbjct: 433 SSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEK 492
Query: 251 GIKKVPGI 258
GI K PGI
Sbjct: 493 GIVKEPGI 500
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G+ D ++ L+ A+ G + + + D + E + V TA+I YA+ G VE
Sbjct: 155 FGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL----VSSTAMITCYAKQGNVEA 210
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLSACS 127
+ +F+ + E+D SW +I G A +G N AL LF+ + G KPD++T +A LSACS
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
G +E GR + H + ++ N++ G ID+ + G L EA + P
Sbjct: 271 QIGALETGRWI-HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 4/252 (1%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
+ GVKPD +++ L C GAL G W+H YV + V +LI +Y + GCVE
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +VF ++++ SW S+I G A NG +++L F M+ G KPD VTF L+ACS
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
H GLVEEG + F M Y + P +EHYG +DL RAG L +A +LV+ +P + +E+++
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI 378
Query: 188 PLYRALLSACRTYG-NIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
+LL+AC +G NI + ERL LT++ +YA+ +WE +K+R K
Sbjct: 379 G---SLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRK 435
Query: 247 MKDLGIKKVPGI 258
MK LG+KK PG
Sbjct: 436 MKGLGLKKQPGF 447
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 43/215 (20%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQ--SGALEHGRWIHDY-----VNENRIMVDAVVGTALIK 58
+ + GV+P+ ++LL+ C SG+ G +H Y ++ N +MV GTA+I
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMV----GTAIIG 117
Query: 59 MYA-------------------------------QSGCVEKSLEVFNGLKEKDTASWTSI 87
MY+ +SG V+ + ++F+ + E+D SWT++
Sbjct: 118 MYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAM 177
Query: 88 ICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYH 147
I G G +AL F M+ G KPD V IA L+AC++ G + G + H +
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWV-HRYVLSQD 236
Query: 148 MKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
K N+ IDL R G + A ++ + +T
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 155/248 (62%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V ++F V +L+ C+ GALE GRW+H +V R+ + VG ALI MY++ G + ++
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF +++KD S+ ++I GLAM+G + +A+ F M G +P+ VT +A+L+ACSH
Sbjct: 310 RRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL++ G ++F+SM ++++P +EHYG +DLLGR G L EA + +P + D I++
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLG- 428
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
LLSAC+ +GN+++GE++A L + +YAS+ +W++ ++R M+D
Sbjct: 429 --TLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 250 LGIKKVPG 257
GI+K PG
Sbjct: 487 SGIEKEPG 494
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G + + + ++ +SG L + + + D + + D V T +I Y++ G +++
Sbjct: 152 LGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDR----DHVAATVMINCYSECGFIKE 207
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+LE+F +K KDT WT++I GL N + NKALELF M+ ++ T + VLSACS
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDLLGRAGLLHEAEELVRKLPDQTDEII 186
G +E GR + HS M+ L ++ G I++ R G ++EA + R + D+
Sbjct: 268 LGALELGRWV-HSFVENQRME--LSNFVGNALINMYSRCGDINEARRVFRVMRDKD---- 320
Query: 187 VPLYRALLSACRTYG 201
V Y ++S +G
Sbjct: 321 VISYNTMISGLAMHG 335
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 158/250 (63%), Gaps = 5/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENR--IMVDAVVGTALIKMYAQSGCVE 67
G P+ ++S+L CA GA++ GRWIH Y+++ + + + T+LI MYA+ G +E
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +VFN + K +SW ++I G AM+G+ + + +LF M +G +PDD+TF+ +LSACS
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
H+G+++ GR +F +M+ Y M P LEHYG IDLLG +GL EAEE++ + + D +I
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVI- 540
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+ +LL AC+ +GN+++GE A L ++ IYASA RW +V K R+ +
Sbjct: 541 --WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALL 598
Query: 248 KDLGIKKVPG 257
D G+KKVPG
Sbjct: 599 NDKGMKKVPG 608
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 50/246 (20%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+PD+ +V++++ CAQSG++E GR +H +++++ + + ALI +Y++ G +E +
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F L KD SW ++I G +AL LF+ M G P+DVT +++L AC+H G
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 131 LVEEGR-------KLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL--------- 174
++ GR K +++ ++ +L ID+ + G + A ++
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSL------IDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 175 -------------------------VRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
+RK+ Q D+I + LLSAC G +D+G +
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT---FVGLLSACSHSGMLDLGRHI 492
Query: 210 ATTLTN 215
T+T
Sbjct: 493 FRTMTQ 498
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHD--------------------YVNENR 45
+I +G+ P+ + +L CA+S A + G+ IH YV R
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 46 I-----------MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMN 94
+ D V TALIK YA G +E + ++F+ + KD SW ++I G A
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAET 244
Query: 95 GKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH 154
G +ALELF+ M +PD+ T + V+SAC+ +G +E GR++ H + NL+
Sbjct: 245 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKI 303
Query: 155 YGGFIDLLGRAGLLHEAEELVRKLP 179
IDL + G L A L +LP
Sbjct: 304 VNALIDLYSKCGELETACGLFERLP 328
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
++ VF ++E + W ++ G A++ AL+L+ M +LG P+ TF VL +C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+ +EG+++ H +L + I + + G L +A ++ K P + V
Sbjct: 147 SKAFKEGQQI-HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD----VV 201
Query: 189 LYRALLSACRTYGNIDMGERL 209
Y AL+ + G I+ ++L
Sbjct: 202 SYTALIKGYASRGYIENAQKL 222
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 152/255 (59%), Gaps = 2/255 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +G+KPD +VS L+ CAQSG + G+ IHDY R+ +D+ + T L+ YA+ G
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ ++E+F +K +W ++I GLAM+G ++ F M + G KPD VTFI+VL
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP-DQTDE 184
CSH+GLV+E R LF M S Y + ++HYG DLLGRAGL+ EA E++ ++P D +
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
+ + LL CR +GNI++ E+ A + + +YA+A+RWE+V KVR
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Query: 245 SKM-KDLGIKKVPGI 258
+ +D +KK G
Sbjct: 480 EIIDRDKKVKKNVGF 494
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C + G+ D F + +L+ + ++ + D N R D V LI ++
Sbjct: 141 CQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE-NPQR---DVVTYNVLIDGLVKA 196
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+ ++ E+F+ + +D SW S+I G A +A++LF+ M LG KPD+V ++ L
Sbjct: 197 REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTL 256
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
SAC+ +G ++G+ + H + + + G +D + G + A E+ D+T
Sbjct: 257 SACAQSGDWQKGKAI-HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKT- 314
Query: 184 EIIVPLYRALLSACRTYGN 202
+ + A+++ +GN
Sbjct: 315 ---LFTWNAMITGLAMHGN 330
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 151/252 (59%), Gaps = 2/252 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +GVKPD S+L C+Q ALE G+ IH ++E+R+ D ++ +AL+ MY++ G
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+++ +FN + +KD SWT +I +G+ +AL F+ M+ G KPD VT +AVLSA
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C HAGL++EG K F M S Y ++P +EHY ID+LGRAG L EA E++++ P+ +D
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDN- 579
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
L L SAC + +G+R+A L +YAS + W+ +VR
Sbjct: 580 -AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 246 KMKDLGIKKVPG 257
KMK++G++K PG
Sbjct: 639 KMKEMGLRKKPG 650
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 5/179 (2%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
CS+ V PD F +++ G GR IH V ++ + D VV ++L+ MYA+
Sbjct: 100 CSICV----PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKF 155
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
E SL+VF+ + E+D ASW ++I +G+ KALELF ME+ G +P+ V+ +
Sbjct: 156 NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI 215
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
SACS +E G+++ H + + +D+ G+ L A E+ +K+P ++
Sbjct: 216 SACSRLLWLERGKEI-HRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS 273
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I+ G +P + + S+L C++S L HG++IH YV + + D V +LI +Y + G
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ VF+ ++ SW +I G KA+E+++ M ++G KPD VTF +VL A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
CS +E+G+++ S+S + ++ + +D+ + G EA + +P +
Sbjct: 420 CSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P+ + ++ C++ LE G+ IH + +D V +AL+ MY + C+E +
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
EVF + K +W S+I G G + +E+ M G +P T ++L ACS +
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
+ G K H + ++ IDL + G + AE + K T + +
Sbjct: 323 RNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK----TQKDVAES 377
Query: 190 YRALLSACRTYGN 202
+ ++S+ + GN
Sbjct: 378 WNVMISSYISVGN 390
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKPD F +VSLL CA GA E GRWIH+Y+ NR ++++V TALI MY + GC+E+ L
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF +K + W S+I GLA NG +A++LF +E G +PD V+FI VL+AC+H+G
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
V + F M Y ++P+++HY +++LG AGLL EAE L++ +P + D +I +
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVI---W 430
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
+LLSACR GN++M +R A L + YAS +E+ + R MK+
Sbjct: 431 SSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
Query: 251 GIKKVPG 257
++K G
Sbjct: 491 QMEKEVG 497
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D FI ++L G L W + I D V ++I +A+ G ++++
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEA-W---RIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + +++ SW S+I G NG+ AL++F M+ KPD T +++L+AC++
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
G E+GR + H + N ID+ + G + E + P +
Sbjct: 272 GASEQGRWI-HEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 197 bits (501), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 161/252 (63%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+++ V+PD+ ++++L+ CA G+LE G I YV+ + + A+I MYA+SG
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ K+L+VF + E++ +WT+II GLA +G +AL +F M G +P+DVTFIA+LSA
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSH G V+ G++LF+SM S Y + PN+EHYG IDLLGRAG L EA+E+++ +P + +
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA 420
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
I + +LL+A + ++++GER + L ++ +Y++ RW++ +R+
Sbjct: 421 I---WGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRN 477
Query: 246 KMKDLGIKKVPG 257
MK +G+KK+ G
Sbjct: 478 MMKGIGVKKMAG 489
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 38/242 (15%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++V G +V L+ G L R + D + ++ D V AL+ Y + G
Sbjct: 141 QVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVG 196
Query: 65 CVEKSLEVFNGLK--EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
++++ + + ++ SWT +I G A +G+ ++A+E+F+ M +PD+VT +AV
Sbjct: 197 EMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAV 256
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
LSAC+ G +E G ++ S M + ID+ ++G + +A ++ + ++
Sbjct: 257 LSACADLGSLELGERIC-SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 183 ----DEIIVPL---------------------------YRALLSACRTYGNIDMGERLAT 211
II L + A+LSAC G +D+G+RL
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 375
Query: 212 TL 213
++
Sbjct: 376 SM 377
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 197 bits (500), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 152/248 (61%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GVK + ++S+L+ C Q GAL+ GRW H Y+ N+I + + T L+ +YA+ G +EK+
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+EVF G++EK+ +W+S + GLAMNG K LELF M+ G P+ VTF++VL CS
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G V+EG++ F SM + + ++P LEHYG +DL RAG L +A +++++P + +
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV--- 411
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ +LL A R Y N+++G + + ++ IYA ++ W++V+ VR MK
Sbjct: 412 WSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKS 471
Query: 250 LGIKKVPG 257
G++K PG
Sbjct: 472 KGVRKQPG 479
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KPD + V L+ C E G +H D V T LI +YA+ GC++
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 71 EVFN-------------------------------GLKEKDTASWTSIICGLAMNGKTNK 99
+VFN G+ E+D +W ++I G A G++ +
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 100 ALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
AL +F M+ G K + V I+VLSAC+ G +++GR HS +K + +
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGR-WAHSYIERNKIKITVRLATTLV 282
Query: 160 DLLGRAGLLHEAEEL 174
DL + G + +A E+
Sbjct: 283 DLYAKCGDMEKAMEV 297
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 146/247 (59%), Gaps = 6/247 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KP+KF S L CA+ G L H +W+H + ++ I ++A++ +AL+ +YA+ G + S
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
EVF +K D + W ++I G A +G +A+ +F ME PD +TF+ +L+ CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
L+EEG++ F MS + ++P LEHYG +DLLGRAG + EA EL+ +P + D +I +
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVI---W 337
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
R+LLS+ RTY N ++GE + N+ IY+S +WE KVR M
Sbjct: 338 RSLLSSSRTYKNPELGE---IAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKE 394
Query: 251 GIKKVPG 257
GI+K G
Sbjct: 395 GIRKAKG 401
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 151/248 (60%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+K ++ +VS L+ CAQ GALE GRWIH Y+ ++ I ++ V +ALI MY++ G +EKS
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
EVFN ++++D W+++I GLAM+G N+A+++F M+ KP+ VTF V ACSH
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV+E LFH M S Y + P +HY +D+LGR+G L +A + + +P +
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS---TSV 536
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL AC+ + N+++ E T L ++ IYA +WE+V+++R M+
Sbjct: 537 WGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRV 596
Query: 250 LGIKKVPG 257
G+KK PG
Sbjct: 597 TGLKKEPG 604
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+K+ L+ A+ +L G+ +H ++ + D V +LI Y G ++ + +V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F +KEKD SW S+I G G +KALELF+ ME+ K VT + VLSAC+ +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
E GR++ + + NL +D+ + G + +A+ L + ++ +
Sbjct: 249 EFGRQVCSYIEEN-RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 33/200 (16%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VK +V +L+ CA+ LE GR + Y+ ENR+ V+ + A++ MY + G +E +
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 71 EVFNGLKEKDTASWTSIICGLAM-------------------------------NGKTNK 99
+F+ ++EKD +WT+++ G A+ NGK N+
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 100 ALELFEAME-TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF 158
AL +F ++ K + +T ++ LSAC+ G +E GR + HS + ++ N
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI-HSYIKKHGIRMNFHVTSAL 406
Query: 159 IDLLGRAGLLHEAEELVRKL 178
I + + G L ++ E+ +
Sbjct: 407 IHMYSKCGDLEKSREVFNSV 426
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 155/248 (62%), Gaps = 3/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+P++ +V+L+ CA G G W H YV +N + ++ VGT+LI +Y++ GC+ +
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ + ++D + + ++I GLA++G + +EL++++ + G PD TF+ +SACSH+G
Sbjct: 272 KVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSG 331
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LV+EG ++F+SM + Y ++P +EHYG +DLLGR+G L EAEE ++K+P + + L+
Sbjct: 332 LVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPN---ATLW 388
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
R+ L + +T+G+ + GE L ++ IYA +RW DV K R MKD
Sbjct: 389 RSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDH 448
Query: 251 GIKKVPGI 258
+ K PGI
Sbjct: 449 RVNKSPGI 456
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 11 VKPDKFIVVSLLTCCAQSGALE-HGRWIHDYVNE--NRIMVDAVVGTALIKMYAQSGCVE 67
V+P++F SL HGR +H +V + + D V AL+ YA G +
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
++ +F ++E D A+W +++ A + + + E+ + +P++++ +A++ +C+
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPN--LEHYGG--FIDLLGRAGLLHEAEELVRKLPDQTD 183
+ G G + Y +K N L + G IDL + G L RK+ D+
Sbjct: 228 NLGEFVRG-----VWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL----SFARKVFDEMS 278
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTL 213
+ V Y A++ +G G L +L
Sbjct: 279 QRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 152/253 (60%), Gaps = 3/253 (1%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++ G+K D V+S+L C +SG L G IH + + + +A V AL+ MYA+ G
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
++K+ +VFN + +KD SW +++ GL ++G +A+ELF M G +PD VTFIAVL
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
+C+HAGL++EG F+SM Y + P +EHYG +DLLGR G L EA ++V+ +P + +
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
+I + ALL ACR + +D+ + + L + IYA+A+ WE V +R
Sbjct: 485 VI---WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIR 541
Query: 245 SKMKDLGIKKVPG 257
SKMK +G++K G
Sbjct: 542 SKMKSMGVEKPSG 554
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 32/234 (13%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC--V 66
G+ D F LL C+ L + +H+++ + + D V ALI Y++ G V
Sbjct: 111 FGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGV 170
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE--------------------- 105
++++F + E+DT SW S++ GL G+ A LF+
Sbjct: 171 RDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCR 230
Query: 106 ----AMETLGAKP--DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
A E P + V++ ++ S AG +E R +F M N+ + I
Sbjct: 231 EMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP---AKNVVTWTIII 287
Query: 160 DLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 213
GLL EA+ LV ++ + ++L+AC G + +G R+ + L
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFN--GLKEKDTASWTSIICGLAMNGKTNKALELFEA 106
+ V + ++ Y+++G +E + +F+ L K+ +WT II G A G +A L +
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 107 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 166
M G K D I++L+AC+ +GL+ G ++ HS+ ++ N +D+ + G
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 167 LLHEAEELVRKLPDQ 181
L +A ++ +P +
Sbjct: 365 NLKKAFDVFNDIPKK 379
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 151/252 (59%), Gaps = 4/252 (1%)
Query: 7 IVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCV 66
IV VKPD+ +VSL++ A +G L HGRW+H V ++ DA + +ALI MY + G +
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
E++ VF EKD A WTS+I GLA +G +AL+LF M+ G P++VT +AVL+AC
Sbjct: 420 ERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTAC 479
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV-RKLPDQTDEI 185
SH+GLVEEG +F+ M + P EHYG +DLL RAG + EA+++V +K+P + +
Sbjct: 480 SHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQ- 538
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
++ ++LSACR +I+ E T L ++ IYA+ RW +K R
Sbjct: 539 --SMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTRE 596
Query: 246 KMKDLGIKKVPG 257
M++ G+KK G
Sbjct: 597 AMENRGVKKTAG 608
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV---DAVVGTALIKMYAQSGCV 66
G++PD++ V+SLL CC + G+ +H ++ E R V + ++ AL+ MY + C
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI-ERRGPVYSSNLILSNALLDMYFK--CK 283
Query: 67 EKSL--EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
E L F+ +K+KD SW +++ G G A +F+ M K D V++ ++L
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQM----PKRDLVSWNSLLF 339
Query: 125 ACSHAGLVEEG-RKLFHSMSSTYHMKPN 151
S G + R+LF+ M+ +KP+
Sbjct: 340 GYSKKGCDQRTVRELFYEMTIVEKVKPD 367
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 193 bits (491), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 148/248 (59%), Gaps = 4/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKPD + L CA GAL+ G+ +HD+++EN + + L+ MY++ G ++K+
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAY 272
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF G++E++ SWT++I GLAMNG +A+E F M G P++ T +LSACSH+G
Sbjct: 273 QVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSG 332
Query: 131 LVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
LV EG F M S + +KPNL HYG +DLLGRA LL +A L++ + + D I
Sbjct: 333 LVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTI--- 389
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+R LL ACR +G++++GER+ + L +K Y++ +WE V ++RS MK+
Sbjct: 390 WRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKE 449
Query: 250 LGIKKVPG 257
I PG
Sbjct: 450 KRIHTKPG 457
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 22 LTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDT 81
L CC +SG L G IH + + + D+++ T L+ +Y+ + +VF+ + ++DT
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 82 ASWTSIICGLAMNGKTNKALELFEAMETL---GAKPDDVTFIAVLSACSHAGLVEEGRKL 138
SW + N +T L LF+ M+ KPD VT + L AC++ G ++ G+++
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 139 FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
H + L + + R G + +A ++
Sbjct: 240 -HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 193 bits (491), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 159/253 (62%), Gaps = 2/253 (0%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
+++ G++ ++ + C+ +L GR H Y ++ + DA + +LI MYA++G
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ +S +VFNGLKEK TASW ++I G ++G +A++LFE M+ G PDD+TF+ VL+
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
AC+H+GL+ EG + M S++ +KPNL+HY ID+LGRAG L +A +V + + ++E
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE--EMSEE 764
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
V ++++LLS+CR + N++MGE++A L ++ +YA +WEDV KVR
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 245 SKMKDLGIKKVPG 257
+M ++ ++K G
Sbjct: 825 QRMNEMSLRKDAG 837
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
+ G+ PD F V SLL+ C++ +L G+ +H ++ N + D V +++ +Y G +
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+F+ +++K SW ++I G NG ++AL +F M G + ++ + V ACS
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ GR+ H+ + + ++ + ID+ + G + ++ ++ L +++
Sbjct: 609 LLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 662
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD +V++L CA+ + G+ +H + + R+ + V+ AL+ MY++ GC+ + +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG--AKPDDVTFIAVLSACSHAG 130
F K+ SW +++ G + G T+ ++ M G K D+VT + + C H
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ ++L H S N F+ + G L A+ + + +T
Sbjct: 410 FLPSLKEL-HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 14 DKFIVVS-----LLTCCAQSGALEHGRWIHDYVN-ENRIMVDAVVGTALIKMYAQSGCVE 67
D F++V LL + +E GR IH V+ R+ D V+ T +I MYA G +
Sbjct: 78 DAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPD 137
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLGAKPDDVTFIAVLSAC 126
S VF+ L+ K+ W ++I + N ++ LE F E + T PD T+ V+ AC
Sbjct: 138 DSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197
Query: 127 SHAGLVEEGRKL-FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
AG+ + G L H + + ++ + G G + +A +L +P++
Sbjct: 198 --AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VK D+ +++ + C L + +H Y + + + +V A + YA+ G + +
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+G++ K SW ++I G A + +L+ M+ G PD T ++LSACS
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ G+++ H ++ +L Y + L G L + L + D++
Sbjct: 511 SLRLGKEV-HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD F ++ CA + G +H V + ++ D VG AL+ Y G V +L++
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLG---AKPDDVTFIAVLSACSH 128
F+ + E++ SW S+I + NG + ++ L E ME G PD T + VL C+
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 176
+ G+ + H + + L +D+ + G + A+ + +
Sbjct: 305 EREIGLGKGV-HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 193 bits (491), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 150/248 (60%), Gaps = 3/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P++ + S+L+ CA GAL GR +H Y+ +N I ++ GT LI +Y + GC+E+++
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF L EK+ +WT++I G A +G A +LF M + P++VTF+AVLSAC+H G
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LVEEGR+LF SM ++M+P +HY +DL GR GLL EA+ L+ ++P + ++ +
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV---W 478
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
AL +C + + ++G+ A+ + ++ +Y+ + W++V +VR +MKD
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 251 GIKKVPGI 258
+ K PG
Sbjct: 539 QVVKSPGF 546
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHD-YVNENRIMVDAVVGTALIKMYAQSGCVEK 68
GV ++ VVS+L + + GR +H Y+ R+ D +G++L+ MY + C +
Sbjct: 199 GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDD 258
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +VF+ + ++ +WT++I G + +K + +FE M P++ T +VLSAC+H
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
G + GR++ H ++ N IDL + G L EA + +L ++
Sbjct: 319 VGALHRGRRV-HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%)
Query: 37 IHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 96
H ++ + + D V +LI Y+ SG + + +F+G ++KD +WT++I G NG
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 97 TNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG 156
++A+ F M+ G +++T ++VL A V GR + T +K ++
Sbjct: 185 ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGS 244
Query: 157 GFIDLLGRAGLLHEAEELVRKLPDQT 182
+D+ G+ +A+++ ++P +
Sbjct: 245 SLVDMYGKCSCYDDAQKVFDEMPSRN 270
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 152/248 (61%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D ++S+ + C GAL+ +WI+ Y+ +N I +D +GT L+ M+++ G E +
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ +FN L +D ++WT+ I +AM G +A+ELF+ M G KPD V F+ L+ACSH
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV++G+++F+SM + + P HYG +DLLGRAGLL EA +L+ +P + +++I
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI--- 641
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ +LL+ACR GN++M A + + +YASA RW D+ KVR MK+
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 250 LGIKKVPG 257
G++K PG
Sbjct: 702 KGLRKPPG 709
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PDK+ L+ CA+S A +G IH + + D V +L+ YA+ G ++ +
Sbjct: 129 GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
+VF+ + E++ SWTS+ICG A A++LF M P+ VT + V+SAC+
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 129 AGLVEEGRKLF 139
+E G K++
Sbjct: 249 LEDLETGEKVY 259
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+PD+ ++S ++ C+Q + G+ H YV N + ALI MY + + +
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + K +W SI+ G NG+ + A E FE M + + V++ ++S
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQG 447
Query: 130 GLVEEGRKLFHSMSS 144
L EE ++F SM S
Sbjct: 448 SLFEEAIEVFCSMQS 462
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P+ +V +++ CA+ LE G ++ ++ + I V+ ++ +AL+ MY + ++ +
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+F+ + ++ G T +AL +F M G +PD ++ ++ +S+CS
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 152/249 (61%), Gaps = 3/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD + S+++ CA G L+ +W+H ++ N + + + ALI MYA+ G ++ +
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF + ++ SW+S+I L+M+G+ + AL LF M+ +P++VTF+ VL CSH+
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLVEEG+K+F SM+ Y++ P LEHYG +DL GRA LL EA E++ +P ++ +I
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI--- 515
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ +L+SACR +G +++G+ A + ++ IYA RWEDV +R M++
Sbjct: 516 WGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEE 575
Query: 250 LGIKKVPGI 258
+ K G+
Sbjct: 576 KNVFKEKGL 584
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 32/204 (15%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V PD+ I+ ++++ C ++G + + R I++++ EN + +D + TAL+ MYA +GC++ +
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 70 LE-------------------------------VFNGLKEKDTASWTSIICGLAMNGKTN 98
E +F+ ++KD WT++I +
Sbjct: 267 REFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQ 326
Query: 99 KALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF 158
+AL +FE M G KPD V+ +V+SAC++ G++++ K HS ++ L
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNAL 385
Query: 159 IDLLGRAGLLHEAEELVRKLPDQT 182
I++ + G L ++ K+P +
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRN 409
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G + D+F + +L ++ AL G +H + + D V T + MYA G +
Sbjct: 105 VGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 164
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ VF+ + +D +W ++I G ++A +LFE M+ PD++ ++SAC
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 129 AGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G + R ++ + + M +L + + AG + A E RK+
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHL--LTALVTMYAGAGCMDMAREFFRKM 273
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 152/248 (61%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D ++S+ + C GAL+ +WI+ Y+ +N I +D +GT L+ M+++ G E +
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ +FN L +D ++WT+ I +AM G +A+ELF+ M G KPD V F+ L+ACSH
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV++G+++F+SM + + P HYG +DLLGRAGLL EA +L+ +P + +++I
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI--- 641
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ +LL+ACR GN++M A + + +YASA RW D+ KVR MK+
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKE 701
Query: 250 LGIKKVPG 257
G++K PG
Sbjct: 702 KGLRKPPG 709
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PDK+ L+ CA+S A +G IH + + D V +L+ YA+ G ++ +
Sbjct: 129 GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
+VF+ + E++ SWTS+ICG A A++LF M P+ VT + V+SAC+
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 129 AGLVEEGRKLF 139
+E G K++
Sbjct: 249 LEDLETGEKVY 259
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+PD+ ++S ++ C+Q + G+ H YV N + ALI MY + + +
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + K +W SI+ G NG+ + A E FE M + + V++ ++S
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQG 447
Query: 130 GLVEEGRKLFHSMSS 144
L EE ++F SM S
Sbjct: 448 SLFEEAIEVFCSMQS 462
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P+ +V +++ CA+ LE G ++ ++ + I V+ ++ +AL+ MY + ++ +
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+F+ + ++ G T +AL +F M G +PD ++ ++ +S+CS
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 151/247 (61%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KP++ ++S+L+ CA G+L+ G+WIH Y ++ V TALI M+A+ G ++ ++
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F ++ KDT +W+++I A +GK K++ +FE M + +PD++TF+ +L+ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
VEEGRK F M S + + P+++HYG +DLL RAG L +A E + KLP + L+
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPM---LW 402
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
R LL+AC ++ N+D+ E+++ + + +YA +WE V+ +R MKD
Sbjct: 403 RILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDR 462
Query: 251 GIKKVPG 257
KVPG
Sbjct: 463 KAVKVPG 469
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + SLL CA + ALE GR +H + + + V LI MY + V+ +
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + E + ++I G A + N+AL LF M+ KP+++T ++VLS+C+
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G ++ G K H + + ++ ID+ + G L +A + K+
Sbjct: 244 GSLDLG-KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 153/249 (61%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD F +VSLL+ CA+ GAL G+ +H Y+ + + + L+ +YA+ G VE++
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-TLGAKPDDVTFIAVLSACSH 128
+F+ + +K++ SWTS+I GLA+NG +A+ELF+ ME T G P ++TF+ +L ACSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G+V+EG + F M Y ++P +EH+G +DLL RAG + +A E ++ +P Q + +I
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI-- 394
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+R LL AC +G+ D+ E + ++ +YAS RW DV K+R +M
Sbjct: 395 -WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 249 DLGIKKVPG 257
G+KKVPG
Sbjct: 454 RDGVKKVPG 462
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+PD L+ + G IH V + V +L+ +YA G V +
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ + EKD +W S+I G A NGK +AL L+ M + G KPD T +++LSAC+ G
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+ G+++ H + NL +DL R G + EA+ L ++ D+
Sbjct: 237 ALTLGKRV-HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 133/208 (63%), Gaps = 5/208 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KP+ V LL+ CA S A GR + D + E RI +DA++GTAL+ MYA+ G +EK++
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAV 383
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK--PDDVTFIAVLSACSH 128
E+FN +K+KD SWT++I G +G +A+ LF ME K P+++TF+ VL+ACSH
Sbjct: 384 EIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSH 443
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GLV EG + F M Y P +EHYG +DLLGRAG L EA EL+R LP +D
Sbjct: 444 GGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDS---T 500
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNV 216
+RALL+ACR YGN D+GE + L +
Sbjct: 501 AWRALLAACRVYGNADLGESVMMRLAEM 528
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 21/174 (12%)
Query: 18 VVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
++S L+ + G L H + + +D + TALI MY ++G + + +F+
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH--------- 128
KD +W +I A G + + L M+ KP+ TF+ +LS+C++
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT 349
Query: 129 -AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
A L+EE R ++ T +D+ + GLL +A E+ ++ D+
Sbjct: 350 VADLLEEERIALDAILGT-----------ALVDMYAKVGLLEKAVEIFNRMKDK 392
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 192 bits (487), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 153/249 (61%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD F +VSLL+ CA+ GAL G+ +H Y+ + + + L+ +YA+ G VE++
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-TLGAKPDDVTFIAVLSACSH 128
+F+ + +K++ SWTS+I GLA+NG +A+ELF+ ME T G P ++TF+ +L ACSH
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G+V+EG + F M Y ++P +EH+G +DLL RAG + +A E ++ +P Q + +I
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI-- 261
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+R LL AC +G+ D+ E + ++ +YAS RW DV K+R +M
Sbjct: 262 -WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 320
Query: 249 DLGIKKVPG 257
G+KKVPG
Sbjct: 321 RDGVKKVPG 329
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 34 GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 93
G IH V + V +L+ +YA G V + +VF+ + EKD +W S+I G A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 94 NGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLE 153
NGK +AL L+ M + G KPD T +++LSAC+ G + G+++ H + NL
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV-HVYMIKVGLTRNLH 125
Query: 154 HYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+DL R G + EA+ L ++ D+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKN 154
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 154/254 (60%), Gaps = 9/254 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNE-----NRIMVDAVVGTALIKMYAQSG 64
G PD ++SLL+ CA G LE G+ +H Y+ E + I V + ALI MYA+ G
Sbjct: 270 GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCG 329
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+++++EVF G+K++D ++W ++I GLA++ ++E+FE M+ L P++VTFI V+
Sbjct: 330 SIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH+G V+EGRK F M Y+++PN++HYG +D+LGRAG L EA V + + +
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNA 448
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
I+ +R LL AC+ YGN+++G+ L +++ IYAS +W+ V KVR
Sbjct: 449 IV---WRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVR 505
Query: 245 SKMKDLGIKKVPGI 258
D +KK G+
Sbjct: 506 KMFDDTRVKKPTGV 519
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD++ +L C++ +G H V + +++ V ALI +A G + +
Sbjct: 107 GVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIA 166
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
E+F+ + +W+S+ G A GK ++A+ LF+ M D V + +++ C
Sbjct: 167 SELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKC 222
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
++ R+LF + + ++ + I G EA + +++ D + V
Sbjct: 223 KEMDSARELFDRFT-----EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT 277
Query: 190 YRALLSACRTYGNIDMGERL 209
+LLSAC G+++ G+RL
Sbjct: 278 ILSLLSACAVLGDLETGKRL 297
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 63 SGCV-----EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDV 117
+GC+ + + E+F+ EKD +W ++I G G +AL +F+ M G PD V
Sbjct: 217 TGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVV 276
Query: 118 TFIAVLSACSHAGLVEEGRKLF------HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
T +++LSAC+ G +E G++L S+SS+ ++ + + ID+ + G + A
Sbjct: 277 TILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI--WNALIDMYAKCGSIDRA 334
Query: 172 EELVRKLPDQ 181
E+ R + D+
Sbjct: 335 IEVFRGVKDR 344
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 155/249 (62%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD+ + ++++ CA G LE G+ +H Y +N ++D +G+AL+ MY++ G +E++
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L VF L +K+ W SII GLA +G +AL++F ME KP+ VTF++V +AC+HA
Sbjct: 1087 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHA 1146
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV+EGR+++ SM Y + N+EHYGG + L +AGL++EA EL+ + + + +I
Sbjct: 1147 GLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI--- 1203
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL CR + N+ + E L ++ +YA +RW DV ++R +M++
Sbjct: 1204 WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRE 1263
Query: 250 LGIKKV-PG 257
LGI+K+ PG
Sbjct: 1264 LGIEKICPG 1272
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 56 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 115
LI Y G +E++ +FN + KD SWT++I G + N + +A+ +F M G PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 116 DVTFIAVLSACSHAGLVEEGRKL-FHSMSSTYHM-------------------------- 148
+VT V+SAC+H G++E G+++ +++ + + +
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 149 ---KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDM 205
K NL + I+ L G EA ++ K+ ++ + + ++ +AC G +D
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 206 GERLATTLTN 215
G R+ ++ +
Sbjct: 1152 GRRIYRSMID 1161
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 148/248 (59%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD+ ++S+L CAQ G+LE G+WIH Y + V ALI+MY++ G + ++
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+++F ++ KD SW+++I G A +G + A+E F M+ KP+ +TF+ +LSACSH
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G+ +EG + F M Y ++P +EHYG ID+L RAG L A E+ + +P + D I
Sbjct: 356 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI--- 412
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ +LLS+CRT GN+D+ L ++ IYA +WEDV+++R +++
Sbjct: 413 WGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRN 472
Query: 250 LGIKKVPG 257
+KK PG
Sbjct: 473 ENMKKTPG 480
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 32/197 (16%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD+F + CA G+ G+ +H ++ + V ALI MY + + + +V
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKA-------------------------------L 101
F+ + E+D SW S++ G A G+ KA +
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAM 226
Query: 102 ELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDL 161
+ F M+ G +PD+++ I+VL +C+ G +E G K H + I++
Sbjct: 227 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEM 285
Query: 162 LGRAGLLHEAEELVRKL 178
+ G++ +A +L ++
Sbjct: 286 YSKCGVISQAIQLFGQM 302
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 152/248 (61%), Gaps = 5/248 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V+ D F VVS+L+ C Q G+LE G I+D + I + +V A + M+ + G E +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F +K+++ SW+++I G AMNG + +AL LF M+ G +P+ VTF+ VLSACSHA
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 130 GLVEEGRKLFHSM--SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
GLV EG++ F M S+ +++P EHY +DLLGR+GLL EA E ++K+P + D
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD---T 381
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
++ ALL AC + ++ +G+++A L IYA+A +W+ V+KVRSKM
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 248 KDLGIKKV 255
+ LG KKV
Sbjct: 442 RKLGTKKV 449
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+GV+PD+F ++ +Q G G +H +V + +V T L+ MY + G +
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSS 162
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +F ++ KD +W + + G + ALE F M + D T +++LSAC
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQ 222
Query: 129 AGLVEEGRKLF 139
G +E G +++
Sbjct: 223 LGSLEIGEEIY 233
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
++L + SGAL G+ IHD V + D +VGT++I MY + G VE + + F+ +K K
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
+ SWT++I G M+G KALELF AM G +P+ +TF++VL+ACSHAGL EG + F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
++M + ++P LEHYG +DLLGRAG L +A +L++++ + D II + +LL+ACR
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII---WSSLLAACRI 468
Query: 200 YGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGI 258
+ N+++ E L + IYA A RW+DV +VR MK+ G+ K PG
Sbjct: 469 HKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGF 527
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 1 MGMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMY 60
+ S+ + + P + + C+ + G+ H D V +ALI MY
Sbjct: 62 LAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMY 121
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF- 119
+ G +E + +VF+ + +++ SWTS+I G +NG A+ LF+ + DD F
Sbjct: 122 STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL 181
Query: 120 -----IAVLSACSHA---GLVE 133
++V+SACS GL E
Sbjct: 182 DSMGLVSVISACSRVPAKGLTE 203
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ--SGCVEKSLE 71
D +VS+++ C++ A IH +V + VG L+ YA+ G V + +
Sbjct: 182 DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARK 241
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA-----VLSAC 126
+F+ + +KD S+ SI+ A +G +N+A E+F + K VTF A VL A
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL----VKNKVVTFNAITLSTVLLAV 297
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
SH+G + G K H ++ ++ ID+ + G + A + ++ ++
Sbjct: 298 SHSGALRIG-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 150/258 (58%), Gaps = 9/258 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENR-IMVDAVVGTALIKMYAQSG 64
++V G++PD+F V + LT CAQ GAL G+WIH++V + I D VGTAL+ MYA+ G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVL 123
C+E ++EVF L ++ SW ++I G A G KA+ E +E G KPD V + VL
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL 328
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+AC+H G +EEGR + +M + Y + P EHY +DL+ RAG L +A L+ K+P +
Sbjct: 329 AACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKP- 387
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVKX----XXXXXXXXXXXIYASADRWED 239
+ ++ ALL+ CRT+ N+++GE L +++ IY S R +
Sbjct: 388 --LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPE 445
Query: 240 VNKVRSKMKDLGIKKVPG 257
+KVR ++ G++K PG
Sbjct: 446 ASKVRGMIEQRGVRKTPG 463
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV-DAVVGTALIKMYAQSGCVEKS 69
+ P L+ C ++ G+ IH +V +N + + D+ V T ++++Y + + +
Sbjct: 112 IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDA 171
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ + + D W ++ G G ++ LE+F M G +PD+ + L+AC+
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 231
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G + +G+ + + ++ ++ +D+ + G + A E+ +KL + V
Sbjct: 232 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRN----VFS 287
Query: 190 YRALLSACRTYG 201
+ AL+ YG
Sbjct: 288 WAALIGGYAAYG 299
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 141/248 (56%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +PD + S+L C + AL G+ IH Y+ +++ + ++ ALI MYA+ GC+EK+
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF +K +D SWT++I +G+ A+ LF ++ G PD + F+ L+ACSHA
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL+EEGR F M+ Y + P LEH +DLLGRAG + EA ++ + + +E +
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV--- 480
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL ACR + + D+G A L + IYA A RWE+V +R+ MK
Sbjct: 481 WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKS 540
Query: 250 LGIKKVPG 257
G+KK PG
Sbjct: 541 KGLKKNPG 548
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V+PD + +L C+ SG + GR IH + + VG L+ MY + G + ++
Sbjct: 135 NVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
V + + +D SW S++ G A N + + ALE+ ME++ D T ++L A S+
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Query: 130 GL--VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
V + +F M K +L + I + + + EA EL ++ E
Sbjct: 255 TTENVMYVKDMFFKMG-----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDA 309
Query: 188 PLYRALLSACRTYGNIDMGERL 209
++L AC + +G+++
Sbjct: 310 VSITSVLPACGDTSALSLGKKI 331
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 35 RWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMN 94
R +H + + ++ +G L++ YA V + +VF+ + E++ +I N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 95 GKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH 154
G + +++F M +PD TF VL ACS +G + GRK+ H ++ + L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI-HGSATKVGLSSTLFV 177
Query: 155 YGGFIDLLGRAGLLHEA----EELVRK 177
G + + G+ G L EA +E+ R+
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRR 204
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 150/258 (58%), Gaps = 9/258 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENR-IMVDAVVGTALIKMYAQSG 64
++V G++PD+F V + LT CAQ GAL G+WIH++V + R I D VGTAL+ MYA+ G
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVL 123
C+E ++EVF L ++ SW ++I G A G KA + +E G KPD V + VL
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL 328
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+AC+H G +EEGR + +M + Y + P EHY +DL+ RAG L +A +L+ K+P +
Sbjct: 329 AACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKP- 387
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVKX----XXXXXXXXXXXIYASADRWED 239
+ ++ ALL+ CRT+ N+++GE L +++ IY S R +
Sbjct: 388 --LASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPE 445
Query: 240 VNKVRSKMKDLGIKKVPG 257
KVR ++ GI+K PG
Sbjct: 446 AFKVRGMIEQRGIRKTPG 463
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV-DAVVGTALIKMYAQSGCVEKS 69
+ P L+ C ++ G+ IH +V +N + + D V T ++++Y + + +
Sbjct: 112 ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDA 171
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ + + D W ++ G G ++ LE+F+ M G +PD+ + L+AC+
Sbjct: 172 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQV 231
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G + +G+ + + ++ ++ +D+ + G + A E+ KL + V
Sbjct: 232 GALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRN----VFS 287
Query: 190 YRALLSACRTYG 201
+ AL+ YG
Sbjct: 288 WAALIGGYAAYG 299
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 146/250 (58%), Gaps = 3/250 (1%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
V GVKP+ + S+L C AL HGR H + ++ + VG+ALI MYA+ G +
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRIN 440
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
S VFN + K+ W S++ G +M+GK + + +FE++ KPD ++F ++LSAC
Sbjct: 441 LSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
GL +EG K F MS Y +KP LEHY ++LLGRAG L EA +L++++P + D +
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV- 559
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+ ALL++CR N+D+ E A L +++ IYA+ W +V+ +R+KM
Sbjct: 560 --WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 248 KDLGIKKVPG 257
+ LG+KK PG
Sbjct: 618 ESLGLKKNPG 627
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG---- 64
+G PD+ V S+L S L GR IH YV + ++ D V +A+I MY +SG
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 65 ---------------------------CVEKSLEVFNGLKEK----DTASWTSIICGLAM 93
V+K+LE+F KE+ + SWTSII G A
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 94 NGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLE 153
NGK +ALELF M+ G KP+ VT ++L AC + + GR H + H+ N+
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST-HGFAVRVHLLDNVH 424
Query: 154 HYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
ID+ + G ++ ++ + +P +
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 40/233 (17%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C V G+ D F+ S+ + G + R + D +++ D V +AL+ YA+
Sbjct: 140 CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARK 195
Query: 64 GCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
GC+E+ + + + ++ E + SW I+ G +G +A+ +F+ + LG PD VT
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 120 IAVLSACSHAGLVEEGRKLFHS-------------MSSTYHMKPNLEHYGGFIDL----- 161
+VL + + ++ GR L H +S+ M H G I L
Sbjct: 256 SSVLPSVGDSEMLNMGR-LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 162 -------------LGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 201
L R GL+ +A E+ +QT E+ V + ++++ C G
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 70/133 (52%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD ++ +L CA+ A + G+ IH + + +DA V ++ MY + G + +
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ + +KD + ++++C A G + + + ME+ G + + V++ +LS + +
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 130 GLVEEGRKLFHSM 142
G +E +F +
Sbjct: 231 GYHKEAVVMFQKI 243
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 149/249 (59%), Gaps = 2/249 (0%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ +KP+ ++++L CA AL G+ IH Y +N + D VG+AL+ MYA+ GC++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
S +VF+ + +K+ +W II M+G +A++L M G KP++VTFI+V +ACSH
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+G+V+EG ++F+ M Y ++P+ +HY +DLLGRAG + EA +L+ +P ++
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK--AG 688
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ +LL A R + N+++GE A L ++ IY+SA W+ +VR MK
Sbjct: 689 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748
Query: 249 DLGIKKVPG 257
+ G++K PG
Sbjct: 749 EQGVRKEPG 757
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSG 64
+IV+G+KPD + +LL A +E G+ IH +V + VD+V V L+ +Y + G
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+VF+ + E++ SW S+I L K ALE F M +P T ++V++
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 125 ACSHAGLVE 133
ACS+ + E
Sbjct: 208 ACSNLPMPE 216
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ + + ++ C +SGA IH +V + + D V L+ MY++ G ++ +
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL------GA-----KPDDVT 118
+ +F ++++D +W ++I G + AL L M+ L GA KP+ +T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 119 FIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ +L +C+ + +G+++ H+ + ++ ++ +D+ + G L ++ RK+
Sbjct: 520 LMTILPSCAALSALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAKCGCL----QMSRKV 574
Query: 179 PDQTDEIIVPLYRALLSACRTYGN 202
DQ + V + ++ A +GN
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGN 598
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 3/178 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNEN-RIMVDAVVGTALIKMYAQSG 64
+++ GV+PD+F + S+L C+ L G+ +H Y +N + ++ VG+AL+ MY
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVL 123
V VF+G+ ++ W ++I G + N +AL LF M E+ G + T V+
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
AC +G ++ H + + +D+ R G + A + K+ D+
Sbjct: 413 PACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 11 VKPDKFIVVSLLTCCAQ---SGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
V+P F +VS++T C+ L G+ +H Y + +++ + L+ MY + G +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINTLVAMYGKLGKLA 253
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
S + +D +W +++ L N + +ALE M G +PD+ T +VL ACS
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 128 HAGLVEEGRKL 138
H ++ G++L
Sbjct: 314 HLEMLRTGKEL 324
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 148/251 (58%), Gaps = 3/251 (1%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
++GV PD+F + +L + ALE GR IH + D VGT+L+ MYA+ G ++
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +F ++ + +W +++ GLA +G+ + L+LF+ M++LG KPD VTFI VLSACS
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
H+GLV E K SM Y +KP +EHY D LGRAGL+ +AE L+ + + E
Sbjct: 731 HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM---SMEASA 787
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+YR LL+ACR G+ + G+R+AT L ++ +YA+A +W+++ R+ M
Sbjct: 788 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 248 KDLGIKKVPGI 258
K +KK PG
Sbjct: 848 KGHKVKKDPGF 858
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G + D F + ++ C A+ G+ +H Y ++ +D V + ++ MY + G + +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
F+ + D +WT++I G NG+ +A +F M +G PD+ T + A S
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 130 GLVEEGRKL 138
+E+GR++
Sbjct: 632 TALEQGRQI 640
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQ-SGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
L+ G+KPD++ + S+L + L + +H + + + D+ V TALI Y+++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
C+ K E+ D +W +++ G + +K L+LF M G + DD T V
Sbjct: 467 CM-KEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 125 ACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
C + +G+++ +++ S Y + +L G +D+ + G + A+ +P D
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+ D+ + +L + +L G+ +H + + + V +LI MY + +
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
VF+ + E+D SW S+I G+A NG +A+ LF + G KPD T +VL A S
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 148/249 (59%), Gaps = 5/249 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+P++F + ++L+ C + GALE G+W+H Y+++ + +D V+GTALI MYA+ G +E++
Sbjct: 195 VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAK 254
Query: 71 EVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVLSACSH 128
VFN L +KD +++++IC LAM G T++ +LF M T P+ VTF+ +L AC H
Sbjct: 255 RVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVH 314
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GL+ EG+ F M + + P+++HYG +DL GR+GL+ EAE + +P + D +I
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI-- 372
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ +LLS R G+I E L + +YA RW +V +R +M+
Sbjct: 373 -WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Query: 249 DLGIKKVPG 257
GI KVPG
Sbjct: 432 VKGINKVPG 440
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 13/215 (6%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
+++ G+ D F+ SLL + G L + + D D +++ YA++G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK----DLPAWNSVVNAYAKAG 142
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-----TLGAKPDDVTF 119
++ + ++F+ + E++ SW+ +I G M GK +AL+LF M+ +P++ T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 120 IAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
VLSAC G +E+G K H+ YH++ ++ ID+ + G L A+ + L
Sbjct: 203 STVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 180 DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 214
+ D V Y A++ YG D +L + +T
Sbjct: 262 SKKD---VKAYSAMICCLAMYGLTDECFQLFSEMT 293
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 187 bits (474), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 153/250 (61%), Gaps = 3/250 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +PD VSLL+ CAQ+GA+ G W+H Y+ + ++ +GTALI +Y++ G V K+
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LGAKPDDVTFIAVLSACSH 128
EVF+ +KE + A+WT++I +G +A+ELF ME G P++VTF+AVLSAC+H
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAH 322
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AGLVEEGR ++ M+ +Y + P +EH+ +D+LGRAG L EA + + +L D T + P
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL-DATGKATAP 381
Query: 189 -LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
L+ A+L AC+ + N D+G +A L ++ IYA + + ++V+ +R M
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Query: 248 KDLGIKKVPG 257
++K G
Sbjct: 442 MRNNLRKQVG 451
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 5/191 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P + S++ CA AL G+ +H + + +D V AL+ Y++ G +E +
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR 162
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ + EK +W S++ G NG ++A+++F M G +PD TF+++LSAC+ G
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
V G H + + N++ I+L R G + +A E+ D+ E V +
Sbjct: 223 AVSLG-SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF----DKMKETNVAAW 277
Query: 191 RALLSACRTYG 201
A++SA T+G
Sbjct: 278 TAMISAYGTHG 288
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 187 bits (474), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 141/261 (54%), Gaps = 9/261 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV------DAVVGTAL 56
C L V P + ++L CA L G H +V ++ D VG +L
Sbjct: 374 FCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 57 IKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDD 116
I MY + GCVE+ VF + E+D SW ++I G A NG N+ALELF M G KPD
Sbjct: 434 IDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDH 493
Query: 117 VTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 176
+T I VLSAC HAG VEEGR F SM+ + + P +HY +DLLGRAG L EA+ ++
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Query: 177 KLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADR 236
++P Q D +I + +LL+AC+ + NI +G+ +A L V+ +YA +
Sbjct: 554 EMPMQPDSVI---WGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGK 610
Query: 237 WEDVNKVRSKMKDLGIKKVPG 257
WEDV VR M+ G+ K PG
Sbjct: 611 WEDVMNVRKSMRKEGVTKQPG 631
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 89/170 (52%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +++ S+L+ C+ + G +H + ++ + D +G+AL+ MY++ G V +
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDA 206
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + +++ SW S+I NG +AL++F+ M +PD+VT +V+SAC+
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
++ G+++ + ++ ++ F+D+ + + EA + +P
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S+I G + FI L+ ++ G+LE GR + D + + I V T L K+ G
Sbjct: 45 SVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL----G 100
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
++++ +F + E+D +W S++ G A + + +AL F M G ++ +F +VLS
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
ACS + +G ++ HS+ + ++ +D+ + G +++A+ + ++ D+
Sbjct: 161 ACSGLNDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 37/208 (17%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNEN-RIMVDAVVGTALIKMYAQSGCVEKS 69
V+PD+ + S+++ CA A++ G+ +H V +N ++ D ++ A + MYA+ ++++
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA 308
Query: 70 LEVFNGLK-------------------------------EKDTASWTSIICGLAMNGKTN 98
+F+ + E++ SW ++I G NG+
Sbjct: 309 RFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 99 KALELFEAMETLGAKPDDVTFIAVLSACS-----HAGLVEEGRKLFHSMSSTYHMKPNLE 153
+AL LF ++ P +F +L AC+ H G+ L H + ++
Sbjct: 369 EALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIF 428
Query: 154 HYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
ID+ + G + E + RK+ ++
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKMMER 456
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 140/246 (56%), Gaps = 4/246 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KP +V+LL C +G+LE G+ IH Y+ E ++ + ALI MYA+ G +EKS E
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRE 589
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+F+ +KD W +I G M+G A+ LF+ ME KP TF+A+LSAC+HAGL
Sbjct: 590 LFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
VE+G+KLF M Y +KPNL+HY +DLL R+G L EAE V +P D +I +
Sbjct: 650 VEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVI---WG 705
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
LLS+C T+G +MG R+A +Y++A +WE+ + R M++ G
Sbjct: 706 TLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESG 765
Query: 252 IKKVPG 257
+ K G
Sbjct: 766 VGKRAG 771
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 37/234 (15%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G++ D S+++ C+ GA+ G+ +H YV + + + V +LI +Y + G +
Sbjct: 427 LGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTV 486
Query: 69 SLEVFNGLKEKDT--ASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+ +F E DT +W ++I ++ KA+ LF+ M + KP +T + +L AC
Sbjct: 487 AWRMFC---EADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR---------- 176
+ G +E G+ + ++ T H + NL ID+ + G L ++ EL
Sbjct: 544 VNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCW 602
Query: 177 -----------------KLPDQTDEIIV----PLYRALLSACRTYGNIDMGERL 209
L DQ +E V P + ALLSAC G ++ G++L
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KP+ + C+ GAL+ GR +H + +N + V +++ Y++SG ++
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F L ++D SWTSII LA +G ++ ++F M+ G PD V +++ L
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
V +G K FH + + + + + LL AE+L ++ ++ ++
Sbjct: 347 VPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYV-NENRIMVDAVVGTALIKMYAQS 63
S+++ G PD F +++ CA+ G ++H V + VG + + Y++
Sbjct: 115 SMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKC 174
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA---KPDDVTFI 120
G ++ + VF+ + ++D +WT+II G NG++ L M + G+ KP+ T
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLE 234
Query: 121 AVLSACSHAGLVEEGRKL 138
ACS+ G ++EGR L
Sbjct: 235 CGFQACSNLGALKEGRCL 252
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD ++ L+ + + G+ H +V + +D+ V +L+ MY + + +
Sbjct: 326 GMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVA 385
Query: 70 LEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
++F + E+ + +W +++ G K +ELF ++ LG + D + +V+S+CSH
Sbjct: 386 EKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSH 445
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G V G+ L H + + IDL G+ G L
Sbjct: 446 IGAVLLGKSL-HCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 13/173 (7%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D+ I V L C QS +LE R + + + + V + LI YA G S VF
Sbjct: 26 DRHISVIL---CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVF 82
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS-----H 128
+ + +D W SII NG ++L F +M G PD T V+SAC+ H
Sbjct: 83 HLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFH 142
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
G G L H N F+ + G L +A + ++PD+
Sbjct: 143 VGTFVHGLVLKHG-----GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR 190
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G + ++ S L+ CA ALE G+ +H + + VG AL+ MY + G +E++
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F + KD SW ++I G + +G AL FE+M+ G KPDD T +AVLSACSH
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV++GR+ F++M+ Y + PN +HY +DLLGRAGLL +A L++ +P + D I
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI--- 580
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LL A R +GN ++ E A + ++ +YAS+ RW DV K+R +M+D
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 250 LGIKKVPG 257
G+KKVPG
Sbjct: 641 KGVKKVPG 648
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
+++T AQSG ++ R + D + D TA++ Y Q+ VE++ E+F+ + E+
Sbjct: 255 TIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER 310
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
+ SW +++ G + A ELF+ M T+ +++ + G + E + LF
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLF 366
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
M K + + I ++G EA L ++ + + + + LS C
Sbjct: 367 DKMP-----KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 200 YGNIDMGERLATTL 213
+++G++L L
Sbjct: 422 VVALELGKQLHGRL 435
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D V +I YAQSG ++++ ++F+ +D +WT+++ G N +A ELF+ M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM- 307
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
+ ++V++ A+L+ +E ++LF M N+ + I + G +
Sbjct: 308 ---PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKI 359
Query: 169 HEAEELVRKLPDQ 181
EA+ L K+P +
Sbjct: 360 SEAKNLFDKMPKR 372
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 27 QSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTS 86
++G E R + D + E D V +IK Y ++ + K+ E+F + E+D SW +
Sbjct: 107 RNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNT 162
Query: 87 IICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS 141
++ G A NG + A +F+ M + +DV++ A+LSA +EE LF S
Sbjct: 163 MLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKS 213
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D ++ YAQ+GCV+ + VF+ + EK+ SW +++ N K +A LF++ E
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
V++ +L + E R+ F SM+ ++ + I ++G +
Sbjct: 216 NWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYAQSGKI 266
Query: 169 HEAEELVRKLPDQ 181
EA +L + P Q
Sbjct: 267 DEARQLFDESPVQ 279
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 156/257 (60%), Gaps = 5/257 (1%)
Query: 2 GMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYA 61
GMCS +K ++ +VS L CA +GAL G IH ++ N ++ +V T+L+ MY
Sbjct: 223 GMCS--ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYV 280
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+ GC++K+L +F +++++ +++++I GLA++G+ AL +F M G +PD V +++
Sbjct: 281 KCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVS 340
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
VL+ACSH+GLV+EGR++F M ++P EHYG +DLLGRAGLL EA E ++ +P +
Sbjct: 341 VLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIE 400
Query: 182 TDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVN 241
+++I +R LS CR NI++G+ A L + +Y+ W+DV
Sbjct: 401 KNDVI---WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVA 457
Query: 242 KVRSKMKDLGIKKVPGI 258
+ R+++ G+K+ PG
Sbjct: 458 RTRTEIAIKGLKQTPGF 474
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +PD F LL C + ++ G+ IH V + + D V +LI MY + G +E S
Sbjct: 127 GNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELS 186
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
VF L+ K ASW+S++ A G ++ L LF M K ++ ++ L AC++
Sbjct: 187 SAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACAN 246
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G + G + H + N+ +D+ + G L +A + +K+ + +
Sbjct: 247 TGALNLGMSI-HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNN----L 301
Query: 189 LYRALLSACRTYGNIDMGERLATTL 213
Y A++S +G + R+ + +
Sbjct: 302 TYSAMISGLALHGEGESALRMFSKM 326
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 152/246 (61%), Gaps = 12/246 (4%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMV-------DAVVGTALIKMYAQSGCVEKSLEV 72
S+L+ CAQSG L GRW+H Y + +M+ D +VGTAL+ MYA+ G ++ S+ V
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F +++++ +W ++ GLAM+GK +++F M KPDD+TF AVLSACSH+G+V
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIV 367
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
+EG + FHS+ Y ++P ++HY +DLLGRAGL+ EAE L+R++P +E+++ +
Sbjct: 368 DEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLG---S 423
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LL +C +G +++ ER+ L + +Y + R + + +R ++ GI
Sbjct: 424 LLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
Query: 253 KKVPGI 258
+K+PG+
Sbjct: 484 RKIPGL 489
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNEN--RIMVDAVVGTALIKMYAQSGCVEKSLEVFN--GL 76
LL CA L G+ +H + + + + + AL + YA SG + + ++F+ L
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 77 KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH---AGLVE 133
EKD WT+++ + G +++LF M + DDV+ + + C+ G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+G H ++ + +++ +D+ G+ GL+ E + + +L +++
Sbjct: 132 QG----HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKS 176
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 4/254 (1%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQS 63
++I G KPD ++SL++ C + G+LE G+WI + D V + ALI MY++
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
G + ++ ++F+ EK +WT++I G A+NG +AL+LF M L KP+ +TF+AVL
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
AC+H+G +E+G + FH M Y++ P L+HY +DLLGR G L EA EL+R + + D
Sbjct: 467 QACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
++ ALL+AC+ + N+ + E+ A +L N++ IYA+A W+ ++
Sbjct: 527 ---AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARI 583
Query: 244 RSKMKDLGIKKVPG 257
RS MK IKK PG
Sbjct: 584 RSIMKQRNIKKYPG 597
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C ++ KPD ++L C L GR IH + D I MY++S
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+ +F+ + + SWT +I G A G ++AL LF AM G KPD VT ++++
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMK-PNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
S C G +E G K + + Y K N+ ID+ + G +HEA ++ P++T
Sbjct: 365 SGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P+ F + CA+ + +H ++ ++ D VGTA + M+ + V+ +
Sbjct: 47 GFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYA 106
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF + E+D +W +++ G +G T+KA LF M PD VT + ++ + S
Sbjct: 107 AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS-- 164
Query: 130 GLVEEGRKLFHSMSST---YHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
E+ KL +M + + + +I G+ G L A +LV + D+ D +
Sbjct: 165 --FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSA-KLVFEAIDRGDRTV 221
Query: 187 VPLYRALLSACRTYG 201
V + ++ A +G
Sbjct: 222 VS-WNSMFKAYSVFG 235
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 143/246 (58%), Gaps = 4/246 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P++ + +L+ C+QSG+ E G+ +H +V + V ALI MY++ G V +
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 70 LEVFNGLKEKD-TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
VF G++EK SWTS+I GLAM+G+ +A+ LF M G PD ++FI++L ACSH
Sbjct: 324 RLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSH 383
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AGL+EEG F M YH++P +EHYG +DL GR+G L +A + + ++P I+
Sbjct: 384 AGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIV-- 441
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+R LL AC ++GNI++ E++ L + YA+A +W+DV +R M
Sbjct: 442 -WRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMI 500
Query: 249 DLGIKK 254
IKK
Sbjct: 501 VQRIKK 506
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 37/237 (15%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+P+ +++T C + + R I D + ++ + ++ Y ++G +E +
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKR 224
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+F+ + +D SW+++I G+A NG N++ F ++ G P++V+ VLSACS +G
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG------------------------- 166
E G K+ H + ID+ R G
Sbjct: 285 FEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 167 ---LLH-EAEELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGERLATTLTNV 216
+H + EE VR + T + P + +LL AC G I+ GE + + V
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRV 400
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 31/210 (14%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD F ++ +L G +H ++ + VGT LI MY GCVE +
Sbjct: 102 VFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFAR 161
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ + + + +W ++I A E+F+ M + ++ +L+ AG
Sbjct: 162 KVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLV----RNHTSWNVMLAGYIKAG 217
Query: 131 LVEEGRKLFHSMS-----STYHMKPNLEHYGGF------IDLLGRAGLLHEAEELVRKLP 179
+E +++F M S M + H G F L RAG+ P
Sbjct: 218 ELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM----------SP 267
Query: 180 DQTDEIIVPLYRALLSACRTYGNIDMGERL 209
++ +LSAC G+ + G+ L
Sbjct: 268 NEVS------LTGVLSACSQSGSFEFGKIL 291
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 184 bits (466), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 151/241 (62%), Gaps = 6/241 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKPD +VS+ + + G+LE G+ HDY+N + I + + A+I MYA+ G +E +L
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 71 EVFNGLKEKDTAS---WTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+F+ K +++ W +IICG A +G AL+L+ +++L KP+ +TF+ VLSAC
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
HAGLVE G+ F SM S + ++P+++HYG +DLLG+AG L EA+E+++K+P + D V
Sbjct: 554 HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD---V 610
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
++ LLSA RT+GN+++ E AT L + +YA A RWEDV VR +M
Sbjct: 611 MIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Query: 248 K 248
+
Sbjct: 671 R 671
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 34/239 (14%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIH-----------DYVNENRIMVDAVVG----- 53
G+KP + ++V LL+ A+S G +H D++ I AV
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 359
Query: 54 ---------------TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTN 98
ALI + ++G VE++ EVF+ +KD SW ++I G A +
Sbjct: 360 LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQ 419
Query: 99 KALELF-EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG 157
AL LF E + + KPD +T ++V SA S G +EEG++ H + + PN
Sbjct: 420 LALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA-HDYLNFSTIPPNDNLTAA 478
Query: 158 FIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV 216
ID+ + G + A + + + + I P + A++ T+G+ + L + L ++
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISP-WNAIICGSATHGHAKLALDLYSDLQSL 536
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 48/236 (20%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C ++ G+ + +I S+L A+ L + V + +D+ ++ Y +S
Sbjct: 65 CRVLKSGLDSNGYICNSVLNMYAKCRLLADA----ESVFRDHAKLDSASFNIMVDGYVRS 120
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+ +L++F+ + E+ S+T++I G A N + ++A+ELF M LG ++VT V+
Sbjct: 121 RRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVI 180
Query: 124 SACSHAG-----------------------------------LVEEGRKLFHSMSSTYHM 148
SACSH G +++ RKLF M
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP----- 235
Query: 149 KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
+ NL + ++ +AGL+ +AEEL DQ E + + ++ C +D
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELF----DQITEKDIVSWGTMIDGCLRKNQLD 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 16 FIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNG 75
F+ +LL L+ R + D + E + V ++ Y+++G +E++ E+F+
Sbjct: 209 FVSTNLLHMYCLCLCLKDARKLFDEMPERNL----VTWNVMLNGYSKAGLIEQAEELFDQ 264
Query: 76 LKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
+ EKD SW ++I G + ++AL + M G KP +V + +LSA + + +G
Sbjct: 265 ITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKG 324
Query: 136 RKL 138
+L
Sbjct: 325 LQL 327
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 145/246 (58%), Gaps = 4/246 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P++ S L C+ G L+ G+ +H + + DA VG +L+ MY+ SG V ++ V
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F + +K SW SII G A +G+ A +F M L +PD++TF +LSACSH G +
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 133 EEGRKLFHSMSS-TYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
E+GRKLF+ MSS H+ ++HY +D+LGR G L EAEEL+ ++ + +E++ +
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV---WL 500
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
ALLSACR + ++D GE+ A + N+ IYASA RW +V+K+R KMK G
Sbjct: 501 ALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNG 560
Query: 252 IKKVPG 257
I K PG
Sbjct: 561 IMKKPG 566
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
++T CA + A G +H + + + + V +LI YA + S +VF+ +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
A WT+++ G ++N K AL +F M P+ TF + L++CS G ++ G+++
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 13 PDKFIV--VSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
P++ +V +++ C +SG ++ + + + D +++ Y Q G V+ +L
Sbjct: 124 PERSVVSWTAMVNGCFRSGKVDQA----ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDAL 179
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F + K+ SWT++ICGL N ++ +AL+LF+ M K F V++AC++A
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAP 239
Query: 131 LVEEG 135
G
Sbjct: 240 AFHMG 244
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 113
T +I Y +S + +L +F+ + +D SW S+I G G N A++LF+ M
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 114 PDDVTFIAVLSACSHAGLVEEGRKLFHSM 142
V++ A+++ C +G V++ +LF+ M
Sbjct: 129 ---VSWTAMVNGCFRSGKVDQAERLFYQM 154
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 142/251 (56%), Gaps = 8/251 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDY---VNENRIMVDAVVGTALIKMYAQSGCVE 67
V P+ + +L+ CA+ GA + G+W+H Y + N+ VD V ALI MY + G +E
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK--VDVNVKNALIDMYGKCGAIE 241
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
++EVF G+K +D SW ++I GLA +G +AL LF M+ G PD VTF+ VL AC
Sbjct: 242 IAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACK 301
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
H GLVE+G F+SM + + + P +EH G +DLL RAG L +A E + K+P + D +I
Sbjct: 302 HMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI- 360
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+ LL A + Y +D+GE L ++ IY A R++D +++ M
Sbjct: 361 --WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAM 418
Query: 248 KDLGIKKVPGI 258
+D G KK G+
Sbjct: 419 RDTGFKKEAGV 429
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D + +++ YA G +E VF+ + E++ SW +I G A NG+ ++ L F+ M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 109 TLGA-KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 167
G+ P+D T VLSAC+ G + G+ + + + K ++ ID+ G+ G
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 168 LHEAEELVR 176
+ A E+ +
Sbjct: 240 IEIAMEVFK 248
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 145/245 (59%), Gaps = 4/245 (1%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D ++ S++ CA A GR +H V + ALI MYA+ V + ++F
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIF 296
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ ++ +D SWTS+I G+A +G+ KAL L++ M + G KP++VTF+ ++ ACSH G VE
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRAL 193
+GR+LF SM+ Y ++P+L+HY +DLLGR+GLL EAE L+ +P DE P + AL
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDE---PTWAAL 413
Query: 194 LSACRTYGNIDMGERLATTL-TNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LSAC+ G MG R+A L ++ K IYASA W V++ R K+ ++ +
Sbjct: 414 LSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEV 473
Query: 253 KKVPG 257
+K PG
Sbjct: 474 RKDPG 478
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 62/97 (63%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++PD F+ +L+ CA G+++HGR +H + + D VV ++L+ MYA+ G + +
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 107
VF+ ++ K+T SWT+++ G A +G+ +ALELF +
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Query: 22 LTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDT 81
L CA++ L + +H ++ + I+ + L+ +Y + G +L+VF+ + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 82 ASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSACSHAGLVEEGRKLF- 139
+W S++ L + K L +F ++ + +PDD F A++ AC++ G ++ GR++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 172
H + S Y ++ +D+ + GLL+ A+
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAK 160
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 149/253 (58%), Gaps = 4/253 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +G+ PDK +S++ G + G+ IH YV++ + DA + AL+ MYA++G
Sbjct: 308 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLS 124
E + + F L++KDT +WT +I GLA +G N+AL +F+ M+ G A PD +T++ VL
Sbjct: 368 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 427
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH GLVEEG++ F M + ++P +EHYG +D+L RAG EAE LV+ +P + +
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN- 486
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
V ++ ALL+ C + N+++ +R+ + + + IYA A RW DV +R
Sbjct: 487 --VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIR 544
Query: 245 SKMKDLGIKKVPG 257
MK + KV G
Sbjct: 545 ESMKSKRVDKVLG 557
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVN--------ENRIMVDAVVGTALIKMYA 61
GVK ++ I+V LL C + + G+W H ++ ++++ + ++ T+LI MYA
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+ G + + +F+G+ E+ SW SII G + NG +AL +F M LG PD VTF++
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMK 149
V+ A G + G+ + +S T +K
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVK 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G PD F +L C+ ++ G +H +V + V+ V T L+ MY G V
Sbjct: 102 GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYG 161
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L VF + + + +W S+I G N + + A+E F M++ G K ++ + +L AC
Sbjct: 162 LRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRC 221
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGF--------IDLLGRAGLLHEAEELVRKLPDQ 181
+ G K FH P + GF ID+ + G L A L +P++
Sbjct: 222 KDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER 280
Query: 182 T 182
T
Sbjct: 281 T 281
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 145/245 (59%), Gaps = 6/245 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD ++V +L C++ G LE + H YV + + +G +L+++Y++ G + + +
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSHAG 130
VFNG+ KDT WTS+I G ++GK KALE F M ++ KP++VTF+++LSACSHAG
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP-DQTDEIIVPL 189
L+ EG ++F M + Y + PNLEHY +DLLGR G L A E+ +++P T +I+
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL--- 539
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
LL ACR + N +M E +A L ++ +Y WE+V K+R+ +K
Sbjct: 540 -GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQ 598
Query: 250 LGIKK 254
GIKK
Sbjct: 599 RGIKK 603
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P+ V+ +L CA + LE GR H+ + + V TAL+ MY + E++
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
VF+ + KD SW ++I G +NG ++++E F M +PD + + VL +CS
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
G +E+ K FHS Y N ++L R G L A ++
Sbjct: 379 LGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD+ +++L++ C + GR +H +V D + +L+ YA+S ++++
Sbjct: 159 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV 218
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F + EKD SW+++I NG +AL +F M G +P+ T + VL AC+ A
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+E+GRK H ++ ++ ++ +D+ + EA + ++P +
Sbjct: 279 DLEQGRKT-HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIM-VDAVVGTALIKMYAQSGCVEKSL 70
KPD F + L C + + +G IH +V ++ + D VG++LI MY + G + ++L
Sbjct: 57 KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 116
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLSACSHA 129
+F+ L++ D +W+S++ G NG +A+E F M PD VT I ++SAC+
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 130 GLVEEGR 136
GR
Sbjct: 177 SNSRLGR 183
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 143/248 (57%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++P+ + S L C++ AL+ GR IH V+++ + D T+LI MY + G + +
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F +K+KD +W ++I G A +G +KAL LF M +PD +TF+AVL AC+HA
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV G F SM Y ++P +HY +DLLGRAG L EA +L+R +P + +
Sbjct: 399 GLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAV--- 455
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LL ACR + N+++ E A L + IYAS +RWEDV +VR +MK+
Sbjct: 456 FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKE 515
Query: 250 LGIKKVPG 257
+ KVPG
Sbjct: 516 SNVVKVPG 523
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD F +L+C ++ E + D + DA +I YA+ G +EK+ E
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYARRGEMEKARE 176
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+F + EK+ SW ++I G G KA F+ G V + A+++ A
Sbjct: 177 LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKK 232
Query: 132 VEEGRKLFHSMS 143
VE +F M+
Sbjct: 233 VELAEAMFKDMT 244
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 51 VVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMET 109
V TA+I Y ++ VE + +F + K+ +W ++I G N + L+LF AM
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
G +P+ + L CS ++ GR++ H + S + ++ I + + G L
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 170 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
+A +L + + V + A++S +GN D
Sbjct: 337 DAWKLFEVMKKKD----VVAWNAMISGYAQHGNAD 367
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 179 bits (454), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 142/247 (57%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKPD F VS++T A+ H +WIH V + + + V TAL+ MYA+ G + +
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F+ + E+ +W ++I G +G ALELFE M+ KP+ VTF++V+SACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LVE G K F+ M Y ++ +++HYG +DLLGRAG L+EA + + ++P + V +Y
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP---AVNVY 610
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
A+L AC+ + N++ E+ A L + IY +A WE V +VR M
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 251 GIKKVPG 257
G++K PG
Sbjct: 671 GLRKTPG 677
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GVKP V+ L CA G LE GR+IH E + + V +LI MY + V+ +
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F L+ + SW ++I G A NG+ AL F M + KPD T+++V++A +
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
+ K H + + N+ +D+ + G A + R + D E V
Sbjct: 452 SITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCG----AIMIARLIFDMMSERHVTT 506
Query: 190 YRALLSACRTYG 201
+ A++ T+G
Sbjct: 507 WNAMIDGYGTHG 518
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+KP +VS+L + + G+ IH Y + + TAL+ MYA+ G +E +
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETA 290
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+G+ E++ SW S+I N +A+ +F+ M G KP DV+ + L AC+
Sbjct: 291 RQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADL 350
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
G +E GR H +S + N+ I + + + A + KL +T
Sbjct: 351 GDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+P + LL C L G+ IH + ++ +D T L MYA+ V ++
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ + E+D SW +I+ G + NG ALE+ ++M KP +T ++VL A S
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 131 LVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
L+ G+++ ++M S + N+ +D+ + G L A +L
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAKCGSLETARQL 293
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 148/255 (58%), Gaps = 4/255 (1%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S++ G +P+ + + ++L+ + +L HG+ IH ++ + V ALI MYA++G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 65 CVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+ + F+ ++ E+DT SWTS+I LA +G +ALELFE M G +PD +T++ V
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
SAC+HAGLV +GR+ F M + P L HY +DL GRAGLL EA+E + K+P + D
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
V + +LLSACR + NID+G+ A L ++ +Y++ +WE+ K+
Sbjct: 583 ---VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKI 639
Query: 244 RSKMKDLGIKKVPGI 258
R MKD +KK G
Sbjct: 640 RKSMKDGRVKKEQGF 654
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 33/164 (20%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE--- 67
+ PD+F + S+L+ CA L G+ IH ++ + +V ALI MY++ G VE
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETAR 334
Query: 68 ------------------------------KSLEVFNGLKEKDTASWTSIICGLAMNGKT 97
++ +F LK++D +WT++I G +G
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSY 394
Query: 98 NKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHS 141
+A+ LF +M G +P+ T A+LS S + G+++ S
Sbjct: 395 GEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYA- 61
M ++ G++P +F + ++L A + +E G+ +H ++ + + + V +L+ MYA
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 62 ------------------------------QSGCVEKSLEVFNGLKEKDTASWTSIICGL 91
Q G ++ ++ F + E+D +W S+I G
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGF 253
Query: 92 AMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMK 149
G +AL++F M ++L PD T +VLSAC++ + G+++ HS T
Sbjct: 254 NQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQI-HSHIVTTGFD 311
Query: 150 PNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
+ I + R G + A L+ + T ++ + + ALL G+++ + +
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQ--RGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 210 ATTLTN 215
+L +
Sbjct: 370 FVSLKD 375
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C +I G+ +++ +L+ +++G H R + D + + A ++ Y++
Sbjct: 38 CRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP----LRTAFSWNTVLSAYSKR 93
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
G ++ + E F+ L ++D+ SWT++I G G+ +KA+ + M G +P T VL
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 166
++ + +E G+K+ HS ++ N+ +++ + G
Sbjct: 154 ASVAATRCMETGKKV-HSFIVKLGLRGNVSVSNSLLNMYAKCG 195
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 143/245 (58%), Gaps = 3/245 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+ +VS+L CA ALE G+ IH Y+ + V +AL+ MY + G +E V
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + ++D SW S+I ++G KA+++FE M GA P VTF++VL ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
EEG++LF +M + +KP +EHY +DLLGRA L EA ++V+ D E ++ +
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ---DMRTEPGPKVWGS 459
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LL +CR +GN+++ ER + L ++ IYA A W++V +V+ ++ G+
Sbjct: 460 LLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 253 KKVPG 257
+K+PG
Sbjct: 520 QKLPG 524
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 7/179 (3%)
Query: 9 IGVKPDKFIVVSLLTCCAQS----GALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
IGV+ D+F +L C S L G+ IH ++ + T L+ MYA+ G
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAV 122
CV+ + VF G+ ++ SW+++I A NGK +AL F M ET + P+ VT ++V
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
L AC+ +E+G KL H + L + + GR G L + + ++ D+
Sbjct: 292 LQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P + L+ CC +L +H ++ +N D + T LI MY+ G V+ + +V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
F+ +++ W ++ L + G + L L+ M +G + D T+ VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 145/248 (58%), Gaps = 5/248 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G ++ + S+L C LE G H V+ + D ++ AL+ MY + G +E +
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDA 312
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L VFN +KE+D +W+++I GLA NG + +AL+LFE M++ G KP+ +T + VL ACSHA
Sbjct: 313 LRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHA 372
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL+E+G F SM Y + P EHYG IDLLG+AG L +A +L+ ++ + D +
Sbjct: 373 GLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVT--- 429
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+R LL ACR N+ + E A + + IYA++ +W+ V ++R++M+D
Sbjct: 430 WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRD 489
Query: 250 LGIKKVPG 257
GIKK PG
Sbjct: 490 RGIKKEPG 497
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V+P+ + S+L C + R +H + + + D V +ALI ++A+ G E +
Sbjct: 157 NVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L VF+ + D W SII G A N +++ ALELF+ M+ G + T +VL AC+
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 130 GLVEEGRKLFHSMSSTYHM---KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
L+E G M + H+ +L +D+ + G L +A + ++ ++
Sbjct: 274 ALLELG------MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 2 GMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWI--HDYVNENRIMVDAVVGTALIKM 59
M SL G+ D L+ CC + A+ G I H Y N +R M+ V LI M
Sbjct: 48 AMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV--NVLINM 105
Query: 60 YAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
Y + + + ++F+ + +++ SWT++I + KALEL M +P+ T+
Sbjct: 106 YVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTY 165
Query: 120 IAVLSACS--------HAGLVEEG 135
+VL +C+ H G+++EG
Sbjct: 166 SSVLRSCNGMSDVRMLHCGIIKEG 189
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 177 bits (448), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 151/255 (59%), Gaps = 12/255 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +PD V S+L+ CAQSG L+ GR +H +N I ++ V ALI MYA+ G +E +
Sbjct: 269 GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENA 328
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF + + A S+I LA++GK +ALE+F ME+L KPD++TFIAVL+AC H
Sbjct: 329 TSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHG 388
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G + EG K+F M T +KPN++H+G I LLGR+G L EA LV+++ + ++ ++
Sbjct: 389 GFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLG- 446
Query: 190 YRALLSACRTYGNIDMGERL------ATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
ALL AC+ + + +M E++ A ++TN +YA +RW+ +
Sbjct: 447 --ALLGACKVHMDTEMAEQVMKIIETAGSITN--SYSENHLASISNLYAHTERWQTAEAL 502
Query: 244 RSKMKDLGIKKVPGI 258
R +M+ G++K PG+
Sbjct: 503 RVEMEKRGLEKSPGL 517
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
+A V + ++ Y + G V ++ +F + +D W ++I G A NG ++ A++ F M+
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G +PD VT ++LSAC+ +G ++ GR++ HS+ + ++ N ID+ + G L
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 169 HEAEELVRKL 178
A + +
Sbjct: 326 ENATSVFESI 335
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV ++ + L C + G+ +H + + D +VG++LI MY + GCV +
Sbjct: 41 GVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSA 100
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ + E++ A+W ++I G NG A LFE + + VT+I ++
Sbjct: 101 RKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVC---RNTVTWIEMIKGYGKR 157
Query: 130 GLVEEGRKLFHSM 142
+E+ R+LF M
Sbjct: 158 IEIEKARELFERM 170
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 146/247 (59%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V + + +L+ CA+ AL GR IH +V + + +V AL+ MYA+ G + +
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF +++KD SW SII G M+G KAL +F+ M + G PD + +AVLSACSHAG
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LVE+GR++F+SMS + ++P EHY +DLLGR G L EA E+V+ +P + V +
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPK---VCVL 606
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALL++CR + N+D+ E +A+ L+ ++ IY++ RWE+ VR+ K
Sbjct: 607 GALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKK 666
Query: 251 GIKKVPG 257
+KKV G
Sbjct: 667 DLKKVSG 673
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 38/238 (15%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ D +I+ +L C G R H V + + + V L+ +Y ++G + +
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F + ++ SW +I G + A+++FE M+ KPD+VT+ +VLS S
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 130 GLVEEGRKLFHSMSST------------------------------YHMKPNLEHY---- 155
G E+ K FH M + Y +K E Y
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR 332
Query: 156 GGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 213
I + G+ G + +AE L R++ ++ E + +L+++ G +D L + L
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIES----WNSLITSFVDAGKLDEALSLFSEL 386
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
+ CA+ AL +H YV + ALI +Y + G V+ + +F ++ K
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETL----GAKPDDVTFIAVLSACSHAGLVEEGR 136
SW S+I GK ++AL LF +E + K + VT+ +V+ C+ G ++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 137 KLFHSM 142
+ F M
Sbjct: 420 EYFRQM 425
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKE--------KDTASWTSIICGLAMNGKTNKALELFE 105
+LI + +G ++++L +F+ L+E + +WTS+I G + G+ + +LE F
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 106 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 165
M+ + VT +LS C+ + GR++ H M N+ +++ +
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREI-HGHVIRTSMSENILVQNALVNMYAKC 482
Query: 166 GLLHEAEELVRKLPDQ 181
GLL E + + D+
Sbjct: 483 GLLSEGSLVFEAIRDK 498
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 148/247 (59%), Gaps = 4/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+PD + S ++ CAQ G+LE R +++YV + D + +ALI M+A+ G VE +
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ ++D W+++I G ++G+ +A+ L+ AME G P+DVTF+ +L AC+H+G
Sbjct: 379 LVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
+V EG F+ M+ + + P +HY IDLLGRAG L +A E+++ +P Q V ++
Sbjct: 439 MVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG---VTVW 494
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALLSAC+ + ++++GE A L ++ +YA+A W+ V +VR +MK+
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 251 GIKKVPG 257
G+ K G
Sbjct: 555 GLNKDVG 561
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD F LL C+ L+ GR++H V D V LI +YA+ + +
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 71 EVFNGLK--EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
VF GL E+ SWT+I+ A NG+ +ALE+F M + KPD V ++VL+A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 129 AGLVEEGRKLFHSM 142
+++GR + S+
Sbjct: 235 LQDLKQGRSIHASV 248
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKPD +VS+L L+ GR IH V + + ++ + +L MYA+ G V +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F+ +K + W ++I G A NG +A+++F M +PD ++ + +SAC+ G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
+E+ R ++ + + + + ++ ID+ + G + E R + D+T + V ++
Sbjct: 338 SLEQARSMYEYVGRSDY-RDDVFISSALIDMFAKCG----SVEGARLVFDRTLDRDVVVW 392
Query: 191 RALL 194
A++
Sbjct: 393 SAMI 396
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 144/257 (56%), Gaps = 12/257 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIM--VDAVVGTALIKMYAQSGCVE 67
GV+P +V +L+ +Q+G LE G +H Y+ + VD +GTAL+ MY++ GC+
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ VF +K K+ +WTS+ GLA+NG+ N+ L M G KP+++TF ++LSA
Sbjct: 275 NAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYR 334
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
H GLVEEG +LF SM + + + P +EHYG +DLLG+AG + EA + + +P + D I
Sbjct: 335 HIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI-- 392
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIY-------ASADRWEDV 240
L R+L +AC YG MGE + L ++ Y A +W +V
Sbjct: 393 -LLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEV 451
Query: 241 NKVRSKMKDLGIKKVPG 257
K+R +MK+ IK PG
Sbjct: 452 EKLRKEMKERRIKTRPG 468
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 31 LEHGRWIHDYVNENRIMVDA-VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIIC 89
L GR +H V + + ++ ++GT L+ YA++G + + +VF+ + E+ + +W ++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 90 GLAM-----NGKTNKALELFEAMETLGA--KPDDVTFIAVLSACSHAGLVEEGRKLFHSM 142
G N KA+ LF G+ +P D T + VLSA S GL+E G L H
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGY 245
Query: 143 SSTYHMKPNLEHYGG--FIDLLGRAGLLHEA 171
P ++ + G +D+ + G L+ A
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 146/249 (58%), Gaps = 5/249 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD ++ +LT C+ AL HG H Y + V+ + AL+ MY + G ++ +
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + ++D SW +++ G ++G +AL LF +M+ G PD+VT +A+LSACSH+
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHS 523
Query: 130 GLVEEGRKLFHSMS-STYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GLV+EG++LF+SMS +++ P ++HY DLL RAG L EA + V K+P + D +
Sbjct: 524 GLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD---IR 580
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ LLSAC TY N ++G ++ + ++ Y++A+RWED ++R K
Sbjct: 581 VLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLSNT-YSAAERWEDAARIRMIQK 639
Query: 249 DLGIKKVPG 257
G+ K PG
Sbjct: 640 KRGLLKTPG 648
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+P K+ +L CA A++ G+ IH +VN + D V TAL+ YA+ G +E +
Sbjct: 98 GVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMA 157
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVLSACSH 128
++VF+ + ++D +W ++I G +++ + LF M + G P+ T + + A
Sbjct: 158 IKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 165
AG + EG+ + H + +L G +D+ ++
Sbjct: 218 AGALREGKAV-HGYCTRMGFSNDLVVKTGILDVYAKS 253
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 46/232 (19%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
+L CA+ G L GR +H Y + ++D V +I YA+ G + + F+ + KD
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH------------ 128
S+ S+I G +N + ++ LF M T G +PD T + VL+ACSH
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 129 -----------------------AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 165
G ++ +++F +M + N +G G
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFG-----FGIH 488
Query: 166 GLLHEAEELVRKLPD---QTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 214
GL EA L + + DE+ + A+LSAC G +D G++L +++
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTL---LAILSACSHSGLVDEGKQLFNSMS 537
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 17 IVVSLLTCCAQSGALEHGRWIHDYVNENRI-MVDAVVGTALIKMYAQSGCVEKSLEVFNG 75
+ +SLL C +S L G+ IH ++ + + + + V L ++YA VE + VF+
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 76 LKEK--DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ + +W +I A N KAL+L+ M G +P T+ VL AC+ ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+G KL HS + ++ +D + G L A ++ ++P +
Sbjct: 121 DG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR 167
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P+ +V + ++GAL G+ +H Y D VV T ++ +YA+S C+ +
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA------VL 123
VF+ +K+ +W+++I G N +A E+F M D+V + +L
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV----NDNVAMVTPVAIGLIL 315
Query: 124 SACSHAGLVEEGR 136
C+ G + GR
Sbjct: 316 MGCARFGDLSGGR 328
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 140/247 (56%), Gaps = 4/247 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRI-MVDAVVGTALIKMYAQSGCVEKSL 70
+P+ F + L CA AL G+ IH Y N+ V V LI MYA+ G + +
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ + K+ +WTS++ G M+G +AL +F+ M +G K D VT + VL ACSH+G
Sbjct: 534 LVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
++++G + F+ M + + + P EHY +DLLGRAG L+ A L+ ++P + ++ +
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV---W 650
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
A LS CR +G +++GE A +T + +YA+A RW+DV ++RS M+
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710
Query: 251 GIKKVPG 257
G+KK PG
Sbjct: 711 GVKKRPG 717
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G +PD +V++L CA G G+ +H + + ++ + VG L+ MYA+ G +++
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ VF+ + KD SW +++ G + G+ A+ LFE M+ K D VT+ A +S +
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 129 AGLVEEGRKLFHSMSSTYHMKPN 151
GL E + M S+ +KPN
Sbjct: 343 RGLGYEALGVCRQMLSS-GIKPN 364
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 1 MGMC-SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV-------DAVV 52
+G+C ++ G+KP++ ++S+L+ CA GAL HG+ IH Y + I + + +V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 53 GTALIKMYAQSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALELFEAM--E 108
LI MYA+ V+ + +F+ L KE+D +WT +I G + +G NKALEL M E
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
+P+ T L AC+ + G+++
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQI 499
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD + + C + ++ G H + + VG AL+ MY++ + + +V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LGAKPDDVTFIAVLSACSHAGL 131
F+ + D SW SII A GK ALE+F M G +PD++T + VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G++L H + T M N+ +D+ + G++ EA + +
Sbjct: 245 HSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 7/162 (4%)
Query: 56 LIKMYAQSGCVEKSLEVFNGLKEKDTA--SWTSIICGLAMNGKTNKALELFEAMETLGAK 113
LI Y GC+ ++ + D W S+I NG NK L LF M +L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 114 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
PD+ TF V AC V G H++S N+ + + R L +A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESA-HALSLVTGFISNVFVGNALVAMYSRCRSLSDA-- 181
Query: 174 LVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 215
RK+ D+ V + +++ + G + + + +TN
Sbjct: 182 --RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTN 221
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 145/249 (58%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P+ S++ C+ + E G+ +H + ++ + +G++L+ MYA+ G + +
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ ++EK+ SWTS+I G NG +ALELF M+ +P+ VTF+ LSACSH+
Sbjct: 328 RRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV++G ++F SM Y MKP +EHY +DL+GRAG L++A E R +P++ D I
Sbjct: 388 GLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI--- 444
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXX-XXXXXXXIYASADRWEDVNKVRSKMK 248
+ ALLS+C +GN+++ A+ L + +YAS D+W++V+K+R MK
Sbjct: 445 WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMK 504
Query: 249 DLGIKKVPG 257
I K G
Sbjct: 505 RRRISKTIG 513
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 45/237 (18%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I V+ D ++ +L+ +SG LE R + + + + + V T++I Y G
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENV----VCCTSMISGYMNQGF 221
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNK-ALELFEAMETLGAKPDDVTFIAVLS 124
VE + E+FN K KD + +++ G + +G+T K +++++ +M+ G P+ TF +V+
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 125 ACS-----------HAGLVEEG------------------------RKLFHSMSSTYHMK 149
ACS HA +++ G R++F M +
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-----E 336
Query: 150 PNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 206
N+ + ID G+ G EA EL ++ + E + LSAC G +D G
Sbjct: 337 KNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 175 bits (443), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 141/239 (58%), Gaps = 3/239 (1%)
Query: 19 VSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE 78
VS+L C+Q+GAL G +H + +N + +D V T+L MY + G +E +L +F +
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 79 KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
++ W ++I +G KA+ LF+ M G KPD +TF+ +LSACSH+GLV+EG+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 139 FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACR 198
F M + Y + P+L+HYG +D+ GRAG L A + ++ + Q D ++ ALLSACR
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD---ASIWGALLSACR 631
Query: 199 TYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPG 257
+GN+D+G+ + L V+ +YASA +WE V+++RS G++K PG
Sbjct: 632 VHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDY-VNENRIMVDAVVGTALIKMYAQSGCVEKS 69
++PD ++SL + +Q G + R + + + + + D +G A++ MYA+ G V+ +
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSACSH 128
VFN L D SW +II G A NG ++A+E++ ME G + T+++VL ACS
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
AG + +G KL H + ++ D+ G+ G L +A L ++P
Sbjct: 464 AGALRQGMKL-HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D VVSLL+ C ++G G IH Y ++ + + V LI +YA+ G + +VF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ + +D SW SII +N + +A+ LF+ M +PD +T I++ S S G +
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 134 EGRKL 138
R +
Sbjct: 366 ACRSV 370
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 149/255 (58%), Gaps = 6/255 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G + D F+ ++L+ A LE G +H + D VVG+AL+ MY++ G
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLS 124
++ +L FN + +++ SW S+I G A +G+ +AL+LFE M+ G PD VTF+ VLS
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSHAGL+EEG K F SMS +Y + P +EH+ D+LGRAG L + E+ + K+P + +
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 185 IIVPLYRALLSA-CRTYGN-IDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNK 242
+I +R +L A CR G ++G++ A L ++ +YA+ RWED+ K
Sbjct: 790 LI---WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVK 846
Query: 243 VRSKMKDLGIKKVPG 257
R KMKD +KK G
Sbjct: 847 ARKKMKDADVKKEAG 861
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 8 VIGVKPDKFIVVSLLTC-----CAQSGALEHGRWIHDYVNENRIMVDAVVG--TALIKMY 60
+I V P+ +++ LL+ A+ L+ GR +H +V +VD +VG L+ MY
Sbjct: 303 MIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTG-LVDFMVGIGNGLVNMY 359
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
A+ G + + VF + +KD+ SW S+I GL NG +A+E +++M P T I
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
+ LS+C+ + G+++ H S + N+ + L G L+E ++ +P+
Sbjct: 420 SSLSSCASLKWAKLGQQI-HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 181 Q 181
Sbjct: 479 H 479
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALE--HGRWIHDYVNENRIMVDAVVGTALIKMYAQS-GCV 66
G+ +++ VS+L C + G++ GR IH + + VDAVV LI MY + G V
Sbjct: 97 GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSV 156
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA-VLSA 125
+L F ++ K++ SW SII + G A +F +M+ G++P + TF + V +A
Sbjct: 157 GYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTA 216
Query: 126 CSHAGLVEEGRKLFHSMSSTYH---MKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
CS L E +L + T + +L G + ++G L A ++ ++
Sbjct: 217 CS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P F ++S L+ CA + G+ IH + I ++ V AL+ +YA++G + + ++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 73 FNGLKEKDTASWTSIICGLAMNGKT-NKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F+ + E D SW SII LA + ++ +A+ F + G K + +TF +VLSA S
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
E G+++ H ++ ++ I G+ G + E++ ++ ++ D +
Sbjct: 533 GELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 32 EHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK-DTASWTSIICG 90
E G+ IH +N I +A ALI Y + G ++ ++F+ + E+ D +W S+I G
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 91 LAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKP 150
N KAL+L M G + D + VLSA + +E G ++ H+ S ++
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV-HACSVRACLES 652
Query: 151 NLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
++ +D+ + G L A +P
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 23 TCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA 82
+C GA R+ H + +NR+ D + LI Y ++G + +VF+ + ++
Sbjct: 12 SCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCV 68
Query: 83 SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
SW I+ G + NG+ +AL M G + F++VL AC G V
Sbjct: 69 SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 139/249 (55%), Gaps = 3/249 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
LI +G+ D+FIV ++L C+ +L G+ IH + + V TAL+ MY + G
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ + +F+G+ E+D SWT II G NG+ +A F M +G +P+ VTF+ +LSA
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C H+GL+EE R +M S Y ++P LEHY +DLLG+AGL EA EL+ K+P + D+
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
I + +LL+AC T+ N + +A L YA+ W+ ++KVR
Sbjct: 614 I---WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 246 KMKDLGIKK 254
K LG K+
Sbjct: 671 AAKKLGAKE 679
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D ++ + L C + A + G I +V + I + + +I MY + + +VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSHAGLV 132
+ + E++ +WT+++ G +GK NKA+EL+ M ++ ++ + AVL AC G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL--PDQT 182
+ G ++ + +++ ++ +D+ + G L EA +++ P T
Sbjct: 124 QLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSST 174
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 92/239 (38%), Gaps = 43/239 (17%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D + + L C L G +H V + +D +VG+ L+ ++A G ++ + ++F
Sbjct: 341 DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLF 400
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS------ 127
+ L KD +++ +I G +G + A LF + LG D +L CS
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLG 460
Query: 128 -----------------------------HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF 158
G ++ G LF M ++ ++ + G
Sbjct: 461 WGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-----LERDVVSWTGI 515
Query: 159 IDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 217
I G+ G + EA K+ + E + LLSACR G + E +TL +K
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG---LLEEARSTLETMK 571
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 142/249 (57%), Gaps = 5/249 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+ F++ S+L+ CA LE GR IH + + + VG+AL+ MY + GC+E S
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET--LGAKPDDVTFIAVLSACSH 128
+ F+ + EK+ + S+I G A G+ + AL LFE M G P+ +TF+++LSACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AG VE G K+F SM STY ++P EHY +D+LGRAG++ A E ++K+P Q +
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP---TIS 482
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
++ AL +ACR +G +G A L + +A+A RW + N VR ++K
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Query: 249 DLGIKKVPG 257
+GIKK G
Sbjct: 543 GVGIKKGAG 551
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 1/163 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV P+ F A G+ IH + ++D VG + MY ++ + +
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+ + E++ +W + I +G+ +A+E F + P+ +TF A L+ACS
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 172
+ G +L H + ++ G ID G+ + +E
Sbjct: 223 LHLNLGMQL-HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE 264
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+ + L C+ L G +H V + D V LI Y + + S +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F + K+ SW S++ N + KA L+ + D +VLSAC+ +
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGL 326
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
E GR + H+ + ++ + +D+ G+ G + ++E+ ++P++
Sbjct: 327 ELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 174 bits (440), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 142/248 (57%), Gaps = 5/248 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+ PD ++S+L + +GAL G W H +V ++ V TA++ MY++ G +EK+
Sbjct: 269 SLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKA 328
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + EK ASW ++I G A+NG AL+LF M + KPD++T +AV++AC+H
Sbjct: 329 KRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITACNHG 387
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLVEEGRK FH M + +EHYG +DLLGRAG L EAE+L+ +P + + II+
Sbjct: 388 GLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILS- 445
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LSAC Y +I+ ER+ ++ +YA+ RW+D V++ M+
Sbjct: 446 --SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRK 503
Query: 250 LGIKKVPG 257
KK G
Sbjct: 504 NQAKKEVG 511
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D I +++ +SG + R + D + + + T +I Y ++ + ++F
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLF 230
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-TLGAKPDDVTFIAVLSACSHAGLV 132
+ + E++ SW ++I G N + + + LF+ M+ T PDDVT ++VL A S G +
Sbjct: 231 DAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGAL 290
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
G + H + ++ +D+ + G + +A+ + ++P++
Sbjct: 291 SLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD F +L C+ S + G +H + D V T ++ MYA+ G + +
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + + SWT++I G G+ + A +LF+ M + D V + A++ +G +
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDM 192
Query: 133 EEGRKLFHSMS 143
R+LF M+
Sbjct: 193 TSARRLFDEMT 203
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 174 bits (440), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 136/247 (55%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KPD+F +V L+ CA GAL+ G W ++ + + + + ALI MYA+ G + +
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
EVF +KEKD + I GLA NG + +F E LG PD TF+ +L C HAG
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
L+++G + F+++S Y +K +EHYG +DL GRAG+L +A L+ +P + + I+ +
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV---W 485
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALLS CR + + E + L ++ IY+ RW++ +VR M
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
Query: 251 GIKKVPG 257
G+KK+PG
Sbjct: 546 GMKKIPG 552
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 1/176 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +GVKPD + +V +L+ C G L+ G WI Y+ E + ++ V T L+ +YA+ G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+EK+ VF+ + EKD +W+++I G A N + +ELF M KPD + + LS+
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
C+ G ++ G S+ + NL ID+ + G + E+ +++ ++
Sbjct: 323 CASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ F +L C ++ + + G +H V + D T+L+ +Y+ SG + +
Sbjct: 106 GLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDA 165
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+ + ++ +WT++ G +G+ +A++LF+ M +G KPD + VLSAC H
Sbjct: 166 HKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHV 225
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA----EELVRK-------- 177
G ++ G + M M+ N ++L + G + +A + +V K
Sbjct: 226 GDLDSGEWIVKYMEEM-EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTM 284
Query: 178 --------LPDQTDEIIVPLYR-----------ALLSACRTYGNIDMGE 207
P + E+ + + + LS+C + G +D+GE
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGE 333
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 143/247 (57%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+ P++ + ++L C+ G+L HG+ +H Y+ N I +DAV T+ I MYA+ G ++ +
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ + E++ SW+S+I +NG +AL+ F M++ P+ VTF+++LSACSH+G
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
V+EG K F SM+ Y + P EHY +DLLGRAG + EA+ + +P + + +
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKP---MASAW 484
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALLSACR + +D+ +A L +++ IYA A WE VN VR KM
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIK 544
Query: 251 GIKKVPG 257
G +K G
Sbjct: 545 GYRKHVG 551
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDA--VVGTALIKMY 60
C + G+ D ++ L+ C A + G+ +H V+ R +D + ++I MY
Sbjct: 198 FCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG-VSIRRSFIDQSDYLQASIIDMY 256
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
+ ++ + ++F +++ WT++I G A + +A +LF M P+ T
Sbjct: 257 VKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLA 316
Query: 121 AVLSACSHAGLVEEGRKLFHSM----------------------------SSTYHMKP-- 150
A+L +CS G + G+ + M + + M P
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 151 NLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGE 207
N+ + I+ G GL EA + K+ Q +VP + +LLSAC GN+ G
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQN---VVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 208 RLATTLT 214
+ ++T
Sbjct: 434 KQFESMT 440
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D F +V + C G LE+G IH +N + D V +L++MYAQ G +E + +VF
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF 167
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ + +++ W ++ G K + LF M G D +T I ++ AC + +
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK 227
Query: 134 EGRKLFHSMSSTYHMKPNLEHY-GGFIDLLGRAGLLHEAEELVRKLPDQT 182
G K H +S ++ ID+ + LL A +L D+
Sbjct: 228 VG-KCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRN 276
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 147/250 (58%), Gaps = 5/250 (2%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ ++ ++F + S++ C+ AL G+ +H + ++ + V ++ + MYA+ G + +
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
S +F+ ++EK+ W +II G A + + + + LFE M+ G P++VTF ++LS C H
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP-DQTDEIIV 187
GLVEEGR+ F M +TY + PN+ HY +D+LGRAGLL EA EL++ +P D T I
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI-- 434
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+ +LL++CR Y N+++ E A L ++ IYA+ +WE++ K R +
Sbjct: 435 --WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 492
Query: 248 KDLGIKKVPG 257
+D +KKV G
Sbjct: 493 RDCDVKKVRG 502
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G K +F + S+L+ C + + +H + I ++ VGTAL+ +YA+ G ++ +
Sbjct: 157 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++VF +++K + +W+S++ G N +AL L+ + + + + T +V+ ACS+
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+ EG+++ H++ N+ +D+ + G L E+ + ++ ++ E+
Sbjct: 277 AALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
++ +V +L CA++GA+ + H + + D + LI Y++ G VE + +VF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+G+ E+ SW ++I N ++AL++F M G K + T +VLSAC
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
E +KL H +S + NL +DL + G++ +A ++ + D++
Sbjct: 180 ECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS 227
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Query: 16 FIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNG 75
F SLL+ A G++ G IH V + + + V ALI MY++ G ++ + VFN
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 76 LKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
++ ++ SWTS+I G A +G + LE F M G KP++VT++A+LSACSH GLV EG
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 136 RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLS 195
+ F+SM + +KP +EHY +DLL RAGLL +A E + +P Q D V ++R L
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD---VLVWRTFLG 651
Query: 196 ACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKV 255
ACR + N ++G+ A + + IYA A +WE+ ++R KMK+ + K
Sbjct: 652 ACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Query: 256 PG 257
G
Sbjct: 712 GG 713
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 10 GVKP-DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++P D SLL C ++ G+ +H + E I D+V+ +LI +Y++SG K
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAK 115
Query: 69 SLEVFNGLK---EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ +VF ++ ++D SW++++ NG+ A+++F LG P+D + AV+ A
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRA 175
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CS++ V GR + T H + ++ ID+ + + E K+ D+ E+
Sbjct: 176 CSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG---ENSFENAYKVFDKMSEL 232
Query: 186 IVPLYRALLSACRTYG 201
V + +++ C G
Sbjct: 233 NVVTWTLMITRCMQMG 248
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 47/251 (18%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ--- 62
+++ G + DKF + S+ + CA+ L G+ +H + + ++ D V +L+ MYA+
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSA 317
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK-TNKALELFEAMETLG-AKPDDVTFI 120
G V+ +VF+ +++ SWT++I G N +A+ LF M T G +P+ TF
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 121 AVLSACSH-----------------------------------AGLVEEGRKLFHSMSST 145
+ AC + + +E+ ++ F S+S
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-- 435
Query: 146 YHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDM 205
+ NL Y F+D R +A +L+ ++ ++ + + +LLS G+I
Sbjct: 436 ---EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 206 GERLATTLTNV 216
GE++ + + +
Sbjct: 493 GEQIHSQVVKL 503
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNEN-RIMVDAVVGTALIKMYAQ-S 63
+ +G+ P+ + +++ C+ S + GR ++ + D VG +LI M+ +
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
E + +VF+ + E + +WT +I G +A+ F M G + D T +V
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
SAC+ + G++L HS + + ++E +D+ + ++ RK+ D+ +
Sbjct: 277 SACAELENLSLGKQL-HSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDD-CRKVFDRME 332
Query: 184 EIIVPLYRALLS 195
+ V + AL++
Sbjct: 333 DHSVMSWTALIT 344
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 141/246 (57%), Gaps = 3/246 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+P+++ +L CA E G+ +H Y+ + ++L+ MY + G +E +
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
V +G + D SWTS+I G A NG+ ++AL+ F+ + G KPD VTF+ VLSAC+HAGL
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
VE+G + F+S++ + + +HY +DLL R+G + + ++ ++P + + L+
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF---LWA 492
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
++L C TYGNID+ E A L ++ IYA+A +WE+ K+R +M+++G
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 252 IKKVPG 257
+ K PG
Sbjct: 553 VTKRPG 558
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 5/197 (2%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
V +P+ F V + A + G+ IH ++ + D V+ ++L+ MY + GC++
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
++ +F+ + EKD SWTS+I + + + LF + +P++ TF VL+AC+
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
E G+++ H + P +D+ + G + A+ +V P +
Sbjct: 331 DLTTEELGKQV-HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD----L 385
Query: 188 PLYRALLSACRTYGNID 204
+ +L+ C G D
Sbjct: 386 VSWTSLIGGCAQNGQPD 402
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KP +L+ C+Q+ ALE G+ +H+++ + + V+ L++MYA+ G + + +
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VF+ + +D SW ++ G A G +A +LF+ M + D ++ A+++
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQ 197
Query: 132 VEEGRKLFHSMSSTYHMKPNL 152
EE L+ M + +PN+
Sbjct: 198 PEEALVLYSLMQRVPNSRPNI 218
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 143/249 (57%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+P ++S+L+ CA +L HG+ +H + + VD V + L+ MY + G + KS
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSACSH 128
+F+ KD W SII G A +G +AL++F M G+ KP++VTF+A LSACS+
Sbjct: 386 KLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSY 445
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AG+VEEG K++ SM S + +KP HY +D+LGRAG +EA E++ + + D +
Sbjct: 446 AGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAV-- 503
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ +LL ACRT+ +D+ E A L ++ +YAS RW DV ++R MK
Sbjct: 504 -WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMK 562
Query: 249 DLGIKKVPG 257
++K PG
Sbjct: 563 TRLVRKSPG 571
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C L + D S++ + G ++ R I D ++E + + T ++ Y Q+
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQN 216
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
V+ + ++F+ + EK SWTS++ G NG+ A ELFE M KP + A++
Sbjct: 217 NRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV---KP-VIACNAMI 272
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
S G + + R++F SM N + I + R G EA +L + Q
Sbjct: 273 SGLGQKGEIAKARRVFDSMKER-----NDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVK 217
P ++LS C + ++ G+++ L +
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 13 PDKFIVV--SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
PD+ I+ L++ ++G ++ R + D + E + V TAL+K Y +G V+ +
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVDVAE 130
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F + EK+ SWT ++ G +G+ + A +L+E + D++ +++ G
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEG 186
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
V+E R++F MS ++ + + G+ + +A ++ +P++T+
Sbjct: 187 RVDEAREIFDEMSER-----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE 234
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 140/248 (56%), Gaps = 4/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P F SL C+ +G LE G+W+H Y+ ++ + A G L+ MYA+SG + +
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+ L ++D SW S++ A +G +A+ FE M +G +P++++F++VL+ACSH+
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL++EG + M + P HY +DLLGRAG L+ A + ++P E +
Sbjct: 377 GLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAI 432
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
++ALL+ACR + N ++G A + + IYAS RW D +VR KMK+
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 250 LGIKKVPG 257
G+KK P
Sbjct: 493 SGVKKEPA 500
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++ G P++F + S++ A G +H + + + VG+AL+ +Y + G
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
++ + VF+ L+ ++ SW ++I G A T KALELF+ M G +P ++ ++
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDLLGRAGLLHEAEELVRKLPDQT 182
ACS G +E+G+ + M + L + G +D+ ++G +H+A RK+ D+
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKS---GEKLVAFAGNTLLDMYAKSGSIHDA----RKIFDRL 323
Query: 183 DEIIVPLYRALLSACRTYG 201
+ V + +LL+A +G
Sbjct: 324 AKRDVVSWNSLLTAYAQHG 342
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+ D+ +LL C L GR +H ++ ++ D V+G L+ MYA+ G +E++
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF + ++D +WT++I G + + + AL F M G P++ T +V+ A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
G +L H N+ +DL R GL+ +A+ + L + D
Sbjct: 176 RGCCGHQL-HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 144/258 (55%), Gaps = 4/258 (1%)
Query: 1 MGMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMY 60
M +C VKP+ VVS+L CA G LE GR + Y EN + V A I+MY
Sbjct: 201 MFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMY 260
Query: 61 AQSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
++ G ++ + +F L +++ SW S+I LA +GK ++AL LF M G KPD VTF
Sbjct: 261 SKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
Query: 120 IAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
+ +L AC H G+V +G++LF SM + + P LEHYG IDLLGR G L EA +L++ +P
Sbjct: 321 VGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP 380
Query: 180 DQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWED 239
+ D ++ + LL AC +GN+++ E + L ++ IYA+ ++W+
Sbjct: 381 MKPDAVV---WGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDG 437
Query: 240 VNKVRSKMKDLGIKKVPG 257
V ++R MK + K G
Sbjct: 438 VLRMRKLMKKETMTKAAG 455
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G + D F +L+T A+ GAL R + D +++ D V A+I Y + G ++ +
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAA 167
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LGAKPDDVTFIAVLSACSH 128
+E+F+ + K+ SWT++I G + NG ++AL++F ME KP+ +T ++VL AC++
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACAN 227
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G +E GR+L + N+ I++ + G++ A+ L +L +Q + +
Sbjct: 228 LGELEIGRRL-EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN---LC 283
Query: 189 LYRALLSACRTYGNID 204
+ +++ + T+G D
Sbjct: 284 SWNSMIGSLATHGKHD 299
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 171 bits (432), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 137/249 (55%), Gaps = 7/249 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD + ++L+ C GALE G+ I + +E + + V T L+ MY + G VE++
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L VF + K+ A+W ++I A G +AL LF+ M P D+TFI VLSAC HA
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHA 445
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV +G + FH MSS + + P +EHY IDLL RAG+L EA E + + P + DEI++
Sbjct: 446 GLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLA- 504
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXX-XXXXXXXIYASADRWEDVNKVRSKMK 248
A+L AC ++ + E+ L +K + A W++ K+R+ M+
Sbjct: 505 --AILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMR 562
Query: 249 DLGIKKVPG 257
D G+ K PG
Sbjct: 563 DRGVVKTPG 571
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +PD+ +VS+L C+ G L GR + + +I + +G+ LI MY + G ++ +
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSA 287
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VFN + +KD +WT++I + NGK+++A +LF ME G PD T VLSAC
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
G +E G+++ + +S ++ N+ G +D+ G+ G + EA + +P
Sbjct: 348 GALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPDKF + CA+ + GR +H + + + D + +LI MYA+ G V +
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+ + E+DT SW S+I G + G A++LF ME G +PD+ T +++L ACSH
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGG--FIDLLGRAGLLHEAEELVRKL 178
G + GR L M+ T K L + G I + G+ G L A + ++
Sbjct: 247 GDLRTGR-LLEEMAIT--KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 170 bits (430), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 152/249 (61%), Gaps = 4/249 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++P+ V S+L C+Q G+++ G+ +H + + + V +AL+ MY+++G ++ +
Sbjct: 517 IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAE 576
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F+ KE+++ ++T++I G +G +A+ LF +M+ G KPD +TF+AVLSACS++G
Sbjct: 577 DMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
L++EG K+F M Y+++P+ EHY D+LGR G ++EA E V+ L ++ + I L+
Sbjct: 637 LIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGN--IAELW 694
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXX--XXXXXXIYASADRWEDVNKVRSKMK 248
+LL +C+ +G +++ E ++ L +YA +W+ V+KVR M+
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754
Query: 249 DLGIKKVPG 257
+ G+KK G
Sbjct: 755 EKGLKKEVG 763
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G K D V +LL+ + E G+ H ++ I + + + LI MY++SG + S
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRIS 472
Query: 70 LEVF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
++F +G E+D A+W S+I G NG T K +F M +P+ VT ++L ACS
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
G V+ G++L H S ++ N+ +D+ +AG + AE++ QT E
Sbjct: 533 QIGSVDLGKQL-HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF----SQTKERNS 587
Query: 188 PLYRALLSACRTYGNIDMGER 208
Y ++ YG MGER
Sbjct: 588 VTYTTMILG---YGQHGMGER 605
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 59/238 (24%)
Query: 18 VVSLLTCCAQSG--ALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNG 75
V LL A S +E GR H +V++N + V+ +L+ MY++ G V KS VF
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLS 378
Query: 76 LKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS-------- 127
++E+D SW ++I NG ++ L L M+ G K D +T A+LSA S
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 128 ---HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV--------- 175
HA L+ +G + F M+S ID+ ++GL+ +++L
Sbjct: 439 KQTHAFLIRQGIQ-FEGMNSY------------LIDMYSKSGLIRISQKLFEGSGYAERD 485
Query: 176 ------------------------RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
RK+ +Q ++L AC G++D+G++L
Sbjct: 486 QATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D V ++ I MYA+ G +E S VF+ E++ W ++I N +++ELF +E
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--LE 307
Query: 109 TLGAK---PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 165
+G+K D+VT++ SA S VE GR+ FH S + + + + R
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQ-FHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 166 GLLHEA 171
G +H++
Sbjct: 367 GSVHKS 372
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ----SGCVEKS 69
D + S L CA++ L+ G+ +H ++ VV +L+ MY C E
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 70 L--EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +VF+ ++ K+ +W ++I G+ +A F M + KP V+F+ V A S
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 140/248 (56%), Gaps = 4/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G D ++VSLL C Q GAL+HG+ +H + + +G A+ MY + ++ +
Sbjct: 230 GFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYA 289
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF + +D SW+S+I G ++G + +LF+ M G +P+ VTF+ VLSAC+H
Sbjct: 290 HTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHG 349
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLVE+ F M Y++ P L+HY D + RAGLL EAE+ + +P + DE ++
Sbjct: 350 GLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMG- 407
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
A+LS C+ YGN+++GER+A L +K +Y++A R+++ +R MK+
Sbjct: 408 --AVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKE 465
Query: 250 LGIKKVPG 257
I KVPG
Sbjct: 466 KQISKVPG 473
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+PD F + +L C+ S + G IH + V +AL+ MY G + +
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F+ + +D+ +T++ G G+ L +F M G D V +++L AC G
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 131 LVEEGRKL 138
++ G+ +
Sbjct: 250 ALKHGKSV 257
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 146/252 (57%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++V +PD + +LL C + +L+ G +H Y + + + + LI MYA+ G
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ ++ +F+ + +D SW+++I G A +G +AL LF+ M++ G +P+ VTF+ VL+A
Sbjct: 524 LGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTA 583
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSH GLVEEG KL+ +M + + + P EH +DLL RAG L+EAE + ++ + D
Sbjct: 584 CSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD-- 641
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
V +++ LLSAC+T GN+ + ++ A + + ++AS+ WE+ +RS
Sbjct: 642 -VVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRS 700
Query: 246 KMKDLGIKKVPG 257
MK +KK+PG
Sbjct: 701 SMKKHDVKKIPG 712
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Query: 19 VSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE 78
+SL+ C+ S +L GR IHD++ + D ++ ++ MY + G + + EVF+ + E
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 79 KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
++ S+TS+I G + NG+ +A+ L+ M PD F +++ AC+ + V G++L
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 139 FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
H+ +L I + R + +A + +P
Sbjct: 191 -HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Query: 6 LIVIGV-KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++ GV P+++I S L C+ ++G IH ++ + +A+ G +L MYA+ G
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + VF+ ++ DTASW II GLA NG ++A+ +F M + G PD ++ ++L
Sbjct: 320 FLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLC 379
Query: 125 ACSHAGLVEEGRKL 138
A + + +G ++
Sbjct: 380 AQTKPMALSQGMQI 393
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 6/193 (3%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD+F S++ CA S + G+ +H V + + ALI MY + + + V
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSACSHAGL 131
F G+ KD SW+SII G + G +AL + M + G P++ F + L ACS
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLR 285
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
+ G ++ H + + N D+ R G L+ A R++ DQ + +
Sbjct: 286 PDYGSQI-HGLCIKSELAGNAIAGCSLCDMYARCGFLNSA----RRVFDQIERPDTASWN 340
Query: 192 ALLSACRTYGNID 204
+++ G D
Sbjct: 341 VIIAGLANNGYAD 353
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 10 GVKPDKFIVVSLLTCCAQSG--ALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
G PD + SLL CAQ+ AL G IH Y+ + + D V +L+ MY +
Sbjct: 366 GFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 68 KSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+F + D+ SW +I+ + + + L LF+ M +PD +T +L C
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
++ G ++ H S + P G ID+ + G L +A R++ D D
Sbjct: 484 VEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQA----RRIFDSMD 535
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 143/250 (57%), Gaps = 2/250 (0%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ + PD + + +LL+ C + +L G H YV + + ++G ALI MY+Q G ++
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQN 542
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLSACS 127
SLEVFN + EKD SW S+I + +G+ A+ ++ M+ G PD TF AVLSACS
Sbjct: 543 SLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACS 602
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
HAGLVEEG ++F+SM + + N++H+ +DLLGRAG L EAE LV K+ ++T V
Sbjct: 603 HAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-KISEKTIGSRV 661
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
++ AL SAC +G++ +G+ +A L + IYA A W++ + R +
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Query: 248 KDLGIKKVPG 257
+G K G
Sbjct: 722 NMIGAMKQRG 731
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+GV+ DKF ++L+ C G+L+ G+ +H V + + + V ALI MY V
Sbjct: 184 LGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVD 242
Query: 69 SLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+ VF + +D ++ +I GLA K +++L +F M +P D+TF++V+ +C
Sbjct: 243 ACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC 301
Query: 127 SHAGL 131
S A +
Sbjct: 302 SCAAM 306
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 92/240 (38%), Gaps = 52/240 (21%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
+IGVKPD+F SLL LE + + + + + ALI Y+++G +E
Sbjct: 382 IIGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSA 125
K+ +F K+ SW +II G NG + LE F + + PD T +LS
Sbjct: 439 KADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSI 498
Query: 126 C-----------------------------------SHAGLVEEGRKLFHSMSSTYHMKP 150
C S G ++ ++F+ MS +
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-----EK 553
Query: 151 NLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE-IIVP---LYRALLSACRTYGNIDMG 206
++ + I R G E E V DE ++P + A+LSAC G ++ G
Sbjct: 554 DVVSWNSLISAYSRHG---EGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKTNKALELFEAM 107
D T L+ + G +E + EVF+ + E+D A W ++I G +G ++ELF M
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 108 ETLGAKPDDVTFIAVLSACSHAGL 131
LG + D F +LS C + L
Sbjct: 182 HKLGVRHDKFGFATILSMCDYGSL 205
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 137/246 (55%), Gaps = 5/246 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+ + +LL+ C SGAL GR +H + + +LI MY + G ++ + +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFE-AMETLGAKPDDVTFIAVLSACSHAGL 131
F+ KD SW S+I G A +G +A+ELFE M G KPD +T++ VLS+C HAGL
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
V+EGRK F+ M+ + +KP L HY +DLLGR GLL EA EL+ +P + + +I +
Sbjct: 339 VKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVI---WG 394
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
+LL +CR +G++ G R A ++ +YAS W++ VR MKD G
Sbjct: 395 SLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKG 454
Query: 252 IKKVPG 257
+K PG
Sbjct: 455 LKTNPG 460
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G D + + S + C + G H + + D +G++L+ +Y SG VE +
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF + E++ SWT++I G A + + L+L+ M + P+D TF A+LSAC+ +
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
G + +GR + H + +K L I + + G L +A + + ++
Sbjct: 235 GALGQGRSV-HCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK 285
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 145/253 (57%), Gaps = 4/253 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVD-AVVGTALIKMYAQSG 64
++V G +P+ + S+L CA+ L+HG+ H Y+ + D ++ +L+ +YA+SG
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + +V + + ++D ++TS+I G G+ AL LF+ M G KPD VT +AVLS
Sbjct: 432 KIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH+ LV EG +LF M Y ++P L+H+ +DL GRAG L +A++++ +P +
Sbjct: 492 ACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSG 551
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
+ LL+AC +GN +G+ A L +K +YA+A W + +VR
Sbjct: 552 ---ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVR 608
Query: 245 SKMKDLGIKKVPG 257
+ M+DLG+KK PG
Sbjct: 609 TIMRDLGVKKDPG 621
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD F S+L C ++ + GR +H + + V ALI MY + + +
Sbjct: 139 GIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIA 198
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + E+D SW ++I A G ++A ELF+ M G + +T+ + C
Sbjct: 199 RRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQT 258
Query: 130 G 130
G
Sbjct: 259 G 259
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 22 LTCCAQSGALEHGRWIHDY-VNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
L C+ GA+ G+ IH ++ + +D V T LI MY++ + +L VF +E
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENS 345
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 140
+W SII G A K+ +A L M G +P+ +T ++L C+ ++ G++
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 141 SMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTY 200
+ K + +D+ ++G + A++ V L + DE+ Y +L+ Y
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ-VSDLMSKRDEVT---YTSLIDG---Y 458
Query: 201 GN 202
GN
Sbjct: 459 GN 460
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 137/249 (55%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGA-LEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G+KP++F S+L CA + A + G+ H + ++R+ V +AL+ MYA+ G +E
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ EVF +EKD SW S+I G A +G+ KAL++F+ M+ K D VTFI V +AC+H
Sbjct: 549 AEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTH 608
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AGLVEEG K F M + P EH +DL RAG L +A +++ +P+ I
Sbjct: 609 AGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI-- 666
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+R +L+ACR + ++G A + +K +YA + W++ KVR M
Sbjct: 667 -WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMN 725
Query: 249 DLGIKKVPG 257
+ +KK PG
Sbjct: 726 ERNVKKEPG 734
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+P++F +LT E +H V + + VGTAL+ Y + G VE++
Sbjct: 392 GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+G+ +KD +W++++ G A G+T A+++F + G KP++ TF ++L+ C+
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRK 177
K FH + + +L + + + G + AEE+ ++
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G++ D I S+L A GR +H + + D VGT+L+ Y + +
Sbjct: 87 LGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+VF+ +KE++ +WT++I G A N ++ L LF M+ G +P+ TF A L +
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G+ G ++ H++ + + I+L + G + +A R L D+T+ V
Sbjct: 207 EGVGGRGLQV-HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA----RILFDKTEVKSVV 261
Query: 189 LYRALLS 195
+ +++S
Sbjct: 262 TWNSMIS 268
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P+ F + L A+ G G +H V +N + V +LI +Y + G V K+
Sbjct: 189 GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA 248
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+F+ + K +W S+I G A NG +AL +F +M + + +F +V+ C++
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK-E 78
S++ CA L +H V + + D + TAL+ Y++ + +L +F +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 79 KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ SWT++I G N +A++LF M+ G +P++ T+ +L+A
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 143/257 (55%), Gaps = 5/257 (1%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYA 61
C +I G PD+ VV++L A G L+ G+WIH + + D + VG AL+ Y
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFI 120
+SG +E + +F ++ ++ SW ++I G A+NGK ++LF+AM E P++ TF+
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
VL+ CS+ G VE G +LF M + ++ EHYG +DL+ R+G + EA + ++ +P
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPV 401
Query: 181 QTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDV 240
+ ++ +LLSACR++G++ + E A L ++ +YA RW+DV
Sbjct: 402 NAN---AAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 241 NKVRSKMKDLGIKKVPG 257
KVR+ MK ++K G
Sbjct: 459 EKVRTLMKKNRLRKSTG 475
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
+ VV +I+ + SG VE+ L +F + E+ SW S+I L+ G+ +ALELF M
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI 226
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G PD+ T + VL + G+++ G+ + + S+ K + +D ++G L
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDL 286
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 206
A + RK+ + V + L+S G + G
Sbjct: 287 EAATAIFRKMQRRN----VVSWNTLISGSAVNGKGEFG 320
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 140/252 (55%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ VKP S++ CA L G+ +H YV + + +AL+ MY++ G
Sbjct: 334 MVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ + ++F+ + D SWT+II G A++G ++A+ LFE M+ G KP+ V F+AVL+A
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSH GLV+E F+SM+ Y + LEHY DLLGRAG L EA + K+ E
Sbjct: 454 CSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM---CVEP 510
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
++ LLS+C + N+++ E++A + V +YAS RW+++ K+R
Sbjct: 511 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRL 570
Query: 246 KMKDLGIKKVPG 257
+M+ G++K P
Sbjct: 571 RMRKKGLRKKPA 582
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KPD F + S+L ++ + G+ IH YV I D +G++L+ MYA+S +E S
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ L +D SW S++ G NG+ N+AL LF M T KP V F +V+ AC+H
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+ G++L H N+ +D+ + G + A ++ ++ + DE+
Sbjct: 358 TLHLGKQL-HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEV 410
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 140/245 (57%), Gaps = 3/245 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD +V +L AQ G L +H Y+ E + + +G ALI MY++ G ++ ++ V
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLV 407
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F G++ K W ++I GLA++G A ++ +E L KPDD+TF+ VL+ACSH+GLV
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLV 467
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
+EG F M + ++P L+HYG +D+L R+G + A+ L+ ++P + +++I +R
Sbjct: 468 KEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI---WRT 524
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
L+AC + + GE +A L +YAS W+DV +VR+ MK+ I
Sbjct: 525 FLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKI 584
Query: 253 KKVPG 257
+K+PG
Sbjct: 585 EKIPG 589
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV DKF + +L C++ G ++ G IH ++ + + D + LI +Y + GC+ S
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM---------------------- 107
++F+ + ++D+ S+ S+I G G A ELF+ M
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235
Query: 108 ------ETLGAKP--DDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
+ P D +++ +++ G +E+ + LF M + ++ + I
Sbjct: 236 GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-----RRDVVTWATMI 290
Query: 160 DLLGRAGLLHEAEELVRKLPDQ 181
D + G +H A+ L ++P +
Sbjct: 291 DGYAKLGFVHHAKTLFDQMPHR 312
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 140/258 (54%), Gaps = 4/258 (1%)
Query: 1 MGMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMY 60
M ++ +G+ PDKF ++L CA + G+ IH V + + D + + L+ MY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
++ G + S +F +D +W ++ICG A +GK +A++LFE M KP+ VTFI
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
++L AC+H GL+++G + F+ M Y + P L HY +D+LG++G + A EL+R++P
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768
Query: 181 QTDEIIVPLYRALLSACRTY-GNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWED 239
+ D++I +R LL C + N+++ E L + +YA A WE
Sbjct: 769 EADDVI---WRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEK 825
Query: 240 VNKVRSKMKDLGIKKVPG 257
V+ +R M+ +KK PG
Sbjct: 826 VSDLRRNMRGFKLKKEPG 843
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 2/169 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L+ G+ D+ + + CA L G I+ ++ + +D V A I MY +
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ ++ VF+ ++ +D SW +II NGK + L LF +M +PD+ TF ++L A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
C+ G + G ++ HS M N ID+ + G++ EAE++
Sbjct: 493 CT-GGSLGYGMEI-HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S++ ++PD+F S+L C G+L +G IH + ++ + ++ VG +LI MY++ G
Sbjct: 473 SMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 531
Query: 65 CVEKSLEVFNGLKEKDTAS--------------------WTSIICGLAMNGKTNKALELF 104
+E++ ++ + ++ S W SII G M ++ A LF
Sbjct: 532 MIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 591
Query: 105 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 164
M +G PD T+ VL C++ G+++ H+ ++ ++ +D+ +
Sbjct: 592 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQI-HAQVIKKELQSDVYICSTLVDMYSK 650
Query: 165 AGLLHEAEELVRK 177
G LH++ + K
Sbjct: 651 CGDLHDSRLMFEK 663
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D +L C+ G IH V D V +AL+ MYA+ +S
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L VF G+ EK++ SW++II G N + AL+ F+ M+ + A + +VL +C+
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 130 GLVEEGRKLF-HSMSSTY 146
+ G +L H++ S +
Sbjct: 295 SELRLGGQLHAHALKSDF 312
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I+ G +P F++ LL S + D + + D V +I Y++S
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP----LRDVVSWNKMINGYSKSND 129
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ K+ FN + +D SW S++ G NG++ K++E+F M G + D TF +L
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 126 CS 127
CS
Sbjct: 190 CS 191
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%)
Query: 17 IVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGL 76
I S+L CA L G +H + ++ D +V TA + MYA+ ++ + +F+
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 342
Query: 77 KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGR 136
+ + S+ ++I G + KAL LF + + G D+++ V AC+ + EG
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 137 KLF 139
+++
Sbjct: 403 QIY 405
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 139/250 (55%), Gaps = 4/250 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I +GVKP++F S L A +L HG+ IH Y+ + +A+V ++LI MY++SG
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 66 VEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+E S VF +K D W ++I LA +G +KAL + + M +P+ T + +L+
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH+GLVEEG + F SM+ + + P+ EHY IDLLGRAG E + ++P + D+
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVR 244
I + A+L CR +GN ++G++ A L + IYA +WE V K+R
Sbjct: 482 HI---WNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLR 538
Query: 245 SKMKDLGIKK 254
MK + K
Sbjct: 539 GVMKKRRVNK 548
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++V G + + S++ A+ G +E + D + + D + T LI YA+ G
Sbjct: 204 QVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKLG 259
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+E + ++F + EK+ SWT++I G G N+AL+LF M LG KP+ TF + L
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
A + + G+++ M T +++PN ID+ ++G L +E + R D+ D
Sbjct: 320 ASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 185 IIVPLYRALLSACRTYG 201
+ + ++SA +G
Sbjct: 379 V---FWNTMISALAQHG 392
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 37/237 (15%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYV------NENRIMVDAVVG----- 53
SL G++ ++ SLL C + +L+ G+WIH ++ N ++ + ++G
Sbjct: 36 SLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKC 95
Query: 54 ---------------------TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLA 92
++ Y +SG + ++ VF+ + E+D SW +++ G A
Sbjct: 96 GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYA 155
Query: 93 MNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNL 152
+G ++AL ++ G K ++ +F +L+AC + ++ R+ H N+
Sbjct: 156 QDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQA-HGQVLVAGFLSNV 214
Query: 153 EHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
ID + G + A ++ D+ + ++ L+S G+++ E+L
Sbjct: 215 VLSCSIIDAYAKCGQMESA----KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 167 bits (423), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 146/259 (56%), Gaps = 16/259 (6%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNEN---RIMVDAVVGTALIKMYAQSGCVEK 68
+PD + + S+L+ CA G+L G W H ++ + +D +V +LI+MY + G +
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRM 307
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSAC 126
+ +VF G++++D ASW ++I G A +G+ +A+ F+ M + +P+ VTF+ +L AC
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
+H G V +GR+ F M Y ++P LEHYG +DL+ RAG + EA ++V +P + D +I
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 187 VPLYRALLSACRTYG-NIDMGERLATTLTNVKXXXXXXX-------XXXXXIYASADRWE 238
+R+LL AC G ++++ E +A + K +YASA RW
Sbjct: 428 ---WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWN 484
Query: 239 DVNKVRSKMKDLGIKKVPG 257
DV VR M + GI+K PG
Sbjct: 485 DVGIVRKLMSEHGIRKEPG 503
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PDK +L CA G+ +H + ++ D V LI +Y GC++ + +V
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 208
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + E+ SW S+I L G+ + AL+LF M+ +PD T +VLSAC+ G +
Sbjct: 209 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSL 267
Query: 133 EEG 135
G
Sbjct: 268 SLG 270
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 135/245 (55%), Gaps = 3/245 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD++ S+ C+ LEHG+ H + + I + +V +AL+ MY + V
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ L ++ +WTS+I G +GK ++ L+ FE M+ G +P+ VTF+ VL+AC+H GLV
Sbjct: 267 FDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLV 326
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
++G + F+SM Y ++P +HY +D LGRAG L EA E V K P + P++ +
Sbjct: 327 DKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP---PVWGS 383
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LL ACR +GN+ + E AT + YAS E +KVR KM++ G+
Sbjct: 384 LLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGV 443
Query: 253 KKVPG 257
KK PG
Sbjct: 444 KKDPG 448
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ V+P+ + V LL C Q G+ IH + ++ + L+ +YA SG ++
Sbjct: 104 LQVEPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +F LK +D W ++I G G + L ++ M PD TF +V ACS
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 221
Query: 129 AGLVEEGRK 137
+E G++
Sbjct: 222 LDRLEHGKR 230
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 167 bits (422), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 149/255 (58%), Gaps = 14/255 (5%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYV--NENRIMVDAVVGTALIKMYAQSGCVEK 68
++ D IV L+ CA GA++ G I+ + R+ +D + +L+ MY +SG EK
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK------PDDVTFIAV 122
+ ++F+ KD ++TS+I G A+NG+ ++LELF+ M+T+ P+DVTFI V
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
L ACSH+GLVEEG++ F SM Y++KP H+G +DL R+G L +A E + ++P +
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 183 DEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNK 242
+ +I +R LL AC +GN+++GE + + + IYAS W++ +K
Sbjct: 343 NTVI---WRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSK 399
Query: 243 VRSKMKDLGIKKVPG 257
+R +++ +++PG
Sbjct: 400 MRDRVRK---RRMPG 411
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 14 DKF-IVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
D F ++ ++ AQ + GR IH V + + T+L+ Y+ G V+ + +V
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 73 FNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F+ EK + WT++I N + +A+ELF+ ME + D V LSAC+ G
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 132 VEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
V+ G +++ S+ + +L +++ ++G E RKL D++ V Y
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSG----ETEKARKLFDESMRKDVTTY 238
Query: 191 RALL 194
+++
Sbjct: 239 TSMI 242
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 167 bits (422), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 149/259 (57%), Gaps = 9/259 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
C +I PD+ +V LL+ C G L G+ +H V + ++ +GTAL+ MYA+
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAK 259
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLGAKPDDVTFIA 121
SG +E + VF + +K+ +W+++I GLA G +AL+LF + M+ +P+ VTF+
Sbjct: 260 SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLG 319
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
VL ACSH GLV++G K FH M + +KP + HYG +D+LGRAG L+EA + ++K+P +
Sbjct: 320 VLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFE 379
Query: 182 TDEIIVPLYRALLSACRTYGNID---MGERLATTLTNVKXXXXXXXXXXXXIYASADRWE 238
D ++ +R LLSAC + + D +GE++ L ++ +A A W
Sbjct: 380 PDAVV---WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWA 436
Query: 239 DVNKVRSKMKDLGIKKVPG 257
+ +VR MK+ +KK+ G
Sbjct: 437 EAAEVRRVMKETKMKKIAG 455
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 11/194 (5%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KP+K LL CA L GR I V ++ D VG LI +Y +
Sbjct: 108 GIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDA 167
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK--PDDVTFIAVLSACS 127
+VF+ + E++ SW SI+ L NGK N E F E +G + PD+ T + +LSAC
Sbjct: 168 RKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF--CEMIGKRFCPDETTMVVLLSAC- 224
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
G + G KL HS ++ N +D+ ++G L A + ++ D+ V
Sbjct: 225 -GGNLSLG-KLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN----V 278
Query: 188 PLYRALLSACRTYG 201
+ A++ YG
Sbjct: 279 WTWSAMIVGLAQYG 292
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 139/252 (55%), Gaps = 11/252 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+KP+ F + S L C+ E GR IH V + D G+ LI +Y + GC + +
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMA 422
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ L E D S ++I A NG +AL+LFE M LG +P+DVT ++VL AC+++
Sbjct: 423 RLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNS 482
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP- 188
LVEEG +LF S M N +HY +DLLGRAG L EAE L T E+I P
Sbjct: 483 RLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEML-------TTEVINPD 534
Query: 189 --LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
L+R LLSAC+ + ++M ER+ + ++ +YAS +W V +++SK
Sbjct: 535 LVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSK 594
Query: 247 MKDLGIKKVPGI 258
MKD+ +KK P +
Sbjct: 595 MKDMKLKKNPAM 606
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 5/183 (2%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S++V V+P+++ S+L C + +G+ IH + ++ T+L+ MY +
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
V+ SL VF ++ + SWTS+I GL NG+ AL F M KP+ T + L
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
CS+ + EEGR++ H + + Y + G IDL G+ G ++ R + D E
Sbjct: 377 GCSNLAMFEEGRQI-HGIVTKYGFDRDKYAGSGLIDLYGKCG----CSDMARLVFDTLSE 431
Query: 185 IIV 187
+ V
Sbjct: 432 VDV 434
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
+ VG+AL+ MY + G ++ V + ++EKD T++I G + G+ +A++ F++M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
+P++ T+ +VL +C + + G KL H + + L + + R L+
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 169 HEAEELVR--KLPDQ 181
++ + + + P+Q
Sbjct: 319 DDSLRVFKCIEYPNQ 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%)
Query: 51 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL 110
+ G+ L+ + G ++ + +VF+G+ E+ +W S+I L + ++ +A+E++ M T
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 111 GAKPDDVTFIAVLSACSHAGLVEEGRK 137
PD+ T +V A S L +E ++
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQR 186
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 4/251 (1%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
V G+ D + + L+ CA + G+ IH ++ ++ + D + LI MYA+ G ++
Sbjct: 535 VSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLK 594
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLGAKPDDVTFIAVLSAC 126
++ VF +KEK+ SW SII +GK +L LF E +E G +PD +TF+ ++S+C
Sbjct: 595 AAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC 654
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
H G V+EG + F SM+ Y ++P EHY +DL GRAG L EA E V+ +P D
Sbjct: 655 CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD--- 711
Query: 187 VPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
++ LL ACR + N+++ E ++ L ++ +A+A WE V KVRS
Sbjct: 712 AGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSL 771
Query: 247 MKDLGIKKVPG 257
MK+ ++K+PG
Sbjct: 772 MKEREVQKIPG 782
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L+ + + P++ +VS+L AL+ GR +H ++ + +G A+I MYA+ G
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ + E+F L ++D SW S+I A + + A+++F M G D V+ A LSA
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 126 CSHA-----GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
C++ G G + HS++S + + L ID+ + G L A + + + +
Sbjct: 552 CANLPSESFGKAIHGFMIKHSLASDVYSESTL------IDMYAKCGNLKAAMNVFKTMKE 605
Query: 181 QTDEIIVPLYRALLSACRTYGNI 203
+ + + ++++AC +G +
Sbjct: 606 KN----IVSWNSIIAACGNHGKL 624
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I GV PD SLL ++ LE+ + IH Y+ + I +D + +ALI Y +
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V + +F+ D +T++I G NG +LE+F + + P+++T +++L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
++ GR+L H ID+ + G ++ A E+ +L
Sbjct: 451 IGILLALKLGREL-HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFN--GLKE 78
LL C+ L G+ +H ++ N I D+ ++ MYA G ++F L+
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 79 KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
W SII NG N+AL + M G PD TF ++ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ GV PD L+ C + ++ D V+ + + V ++LIK Y + G
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ ++F+ + +KD W ++ G A G + ++ F M P+ VTF VLS
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
C+ L++ G +L H + + + + + G +A +L R +
Sbjct: 249 CASKLLIDLGVQL-HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 58/117 (49%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+ P+ +L+ CA ++ G +H V + + + + +L+ MY++ G + +
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
++F + DT +W +I G +G ++L F M + G PD +TF ++L + S
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 137/249 (55%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD+ V++L C+ +L GR IH + +D + LI MYA+ G ++ S
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 70 LEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+VF+ ++ + + SW S+I G A NG AL++F++M PD++TF+ VL+ACSH
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AG V +GRK+F M Y ++ ++H +DLLGR G L EA++ + + D
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPD---AR 903
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
L+ +LL ACR +G+ GE A L ++ IYAS WE N +R M+
Sbjct: 904 LWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMR 963
Query: 249 DLGIKKVPG 257
D G+KKVPG
Sbjct: 964 DRGVKKVPG 972
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G D F SLL+ CA S LE G H + + ++ + VG AL+ MYA+ G +E +
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F + ++D +W +II + ++A +LF+ M G D + L AC+H
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
+ +G+++ H +S + +L ID+ + G++ +A ++ LP+
Sbjct: 543 HGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE 592
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VK + + S+L+ L+ G +H + + + VG++L+ MY++ +E +
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF L+EK+ W ++I G A NG+++K +ELF M++ G DD TF ++LS C+ +
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+E G + FHS+ + NL +D+ + G L +A ++ ++ D+ +
Sbjct: 443 DLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
SL + P+KF +L+ CA+ +E GR IH + + + ++ G AL+ MYA+
Sbjct: 150 SLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCD 209
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + VF + + +T WT + G G +A+ +FE M G +PD + F+ V++
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
G +++ R LF MSS P++ + I G+ G A E + + +
Sbjct: 270 TYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 185 IIVPLYRALLSACRTYGNIDMG 206
++LSA N+D+G
Sbjct: 325 STRSTLGSVLSAIGIVANLDLG 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDA-VVGTALIKMYAQSG 64
++ GV P + +++ C + +L G H + + + +G +L+ MY S
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 65 CVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+ ++ +F+ L K WT ++ G + NG +AL+ ++ M G PD TF+ VL
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHY--GGFIDLLGRAGLLHEAEELVRKLPDQ 181
CS + EGR + HS+ +H+ +L+ ID+ + G + + ++ ++ +
Sbjct: 740 RVCSVLSSLREGRAI-HSL--IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 182 TD 183
++
Sbjct: 797 SN 798
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ D + S L C L G+ +H + + D G++LI MY++ G ++ +
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ L E S ++I G + N +A+ LF+ M T G P ++TF ++ AC
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 163
+ G + FH + E+ G I LLG
Sbjct: 643 ESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLG 673
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 30 ALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIIC 89
AL G+ +H I + +G A++ +YA+ V + + F+ L EKD +W S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 90 GLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMK 149
+ GK K L F ++ P+ TF VLS C+ VE GR++ SM +K
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 150 PNLEHY----GGFIDLLGRAGLLHEAEELVRKLPD 180
LE G +D+ + + +A + + D
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 139/250 (55%), Gaps = 5/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRI--MVDAVVGTALIKMYAQSGCVE 67
G++PD F +VS+ C G L +H V + + D ++ +LI MY + G ++
Sbjct: 213 GLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMD 272
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +F +++++ SW+S+I G A NG T +ALE F M G +P+ +TF+ VLSAC
Sbjct: 273 LASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACV 332
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
H GLVEEG+ F M S + ++P L HYG +DLL R G L EA+++V ++P + + V
Sbjct: 333 HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPN---V 389
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
++ L+ C +G+++M E +A + ++ +YA W+DV +VR M
Sbjct: 390 MVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLM 449
Query: 248 KDLGIKKVPG 257
K + K+P
Sbjct: 450 KTKKVAKIPA 459
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD++ + ++ Q G+ +H + D + I +Y ++G E +
Sbjct: 113 VLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENAR 172
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ E+ SW +II GL G+ N+A+E+F M+ G +PDD T ++V ++C G
Sbjct: 173 KVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLG 232
Query: 131 LVEEGRKLFHS-MSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ +L + + K ++ ID+ G+ G + A + ++
Sbjct: 233 DLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM 281
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 139/248 (56%), Gaps = 4/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+K D + +LL C+ L+ G+ IH ++ + + V ++LI MY++ G +E +
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 71 EVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ F + K T +W ++I G A +G +L+LF M K D VTF A+L+ACSH
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL++EG +L + M Y ++P +EHY +DLLGRAGL+++A+EL+ +P D +++
Sbjct: 524 GLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVL-- 581
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ L CR G I+M ++A L ++ +Y+ +WE+ V+ MK+
Sbjct: 582 -KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Query: 250 LGIKKVPG 257
G+KKVPG
Sbjct: 641 RGVKKVPG 648
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ--SGCVEK 68
V+ D + LL+ C+ G+ +H V + + ALI MY Q +G +E
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+L +F LK KD SW SII G A G + A++ F + + K DD F A+L +CS
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
++ G+++ H++++ N I + + G++ A + +++ +
Sbjct: 421 LATLQLGQQI-HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 75/199 (37%), Gaps = 43/199 (21%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAM 107
+ + A+I YA G V + VF+GL KD SW S+I G + + A ELF M
Sbjct: 237 EITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM 296
Query: 108 ETLGAKPDDVTFIAVLSACS-------------------------------------HAG 130
+ + D T+ +LSACS G
Sbjct: 297 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 356
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
+E+ LF S+ S +L + I + GL +A + L ++ +
Sbjct: 357 TMEDALSLFESLKS-----KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 191 RALLSACRTYGNIDMGERL 209
ALL +C + +G+++
Sbjct: 412 SALLRSCSDLATLQLGQQI 430
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + + ++ CA +LE G H + ++ V +L+ +Y + G ++ S
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+FN + +D SWT+++ A G+ + ++LF+ M G KPD VT V+SACS A
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLVE+G++ F M+S Y + P++ HY IDL R+G L EA + +P D I
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI---G 542
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LLSACR GN+++G+ A +L + IYAS +W+ V ++R M++
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 250 LGIKKVPG 257
+KK PG
Sbjct: 603 KNVKKEPG 610
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 1/171 (0%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
V G+K D++ S+L C GA+ G+ IH + VG+ALI MY + C+
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ VF+ +K+K+ SWT+++ G G+ +A+++F M+ G PD T +SAC+
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ +EEG + FH + T + + + L G+ G + ++ L ++
Sbjct: 383 NVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 15 KFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFN 74
+ ++++L + +G + G+ IH V + +VG+ L+ MYA GC+ + +VF
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 75 GLK------------------------------EKDTASWTSIICGLAMNGKTNKALELF 104
GL EKD+ SW ++I GLA NG +A+E F
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 105 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 164
M+ G K D F +VL AC G + EG+++ H+ + + ++ ID+ +
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI-HACIIRTNFQDHIYVGSALIDMYCK 317
Query: 165 AGLLHEAEELVRKLPDQT 182
LH A+ + ++ +
Sbjct: 318 CKCLHYAKTVFDRMKQKN 335
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 3/245 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD+ V +L CA A + GR IH Y+ N D V +L+ MYA+ G + + +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + KD SWT +I G M+G +A+ LF M G + D+++F+++L ACSH+GLV
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
+EG + F+ M ++P +EHY +D+L R G L +A + +P D I + A
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI---WGA 673
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LL CR + ++ + E++A + ++ IYA A++WE V ++R ++ G+
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Query: 253 KKVPG 257
+K PG
Sbjct: 734 RKNPG 738
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + V ++L CCA+ L+ G+ +H+++ EN + D V AL+ MYA+ G ++++
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE-AMETLGAKPDDVTFIAVLSACSH 128
VF+ ++ KD SW +II G + N N+AL LF +E PD+ T VL AC+
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 129 AGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
++GR++ + M + Y ++ + +D+ + G L
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGAL 550
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHD------YVNENRIMVDAVVGTALIKM 59
++V G++ D +VS+ CA S + GR +H + E+R L+ M
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC------NTLLDM 340
Query: 60 YAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
Y++ G ++ + VF + ++ S+TS+I G A G +A++LFE ME G PD T
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 120 IAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 172
AVL+ C+ L++EG+++ H + ++ +D+ + G + EAE
Sbjct: 401 TAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+ D + + + ++ G +H ++ ++ VG +L+ Y ++ V+ +
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSA 249
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF+ + E+D SW SII G NG K L +F M G + D T ++V + C+ +
Sbjct: 250 RKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
L+ GR + HS+ +D+ + G L A+ + R++ D++
Sbjct: 310 RLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 66/125 (52%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D + S+L CA S +L+ G+ + +++ N ++D+ +G+ L MY G ++++ VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ +K + W ++ LA +G + ++ LF+ M + G + D TF V + S V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 134 EGRKL 138
G +L
Sbjct: 213 GGEQL 217
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD + L CA A G+ IH + + +G ALI+MY++ GC+E S
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF + +D +WT +I M G+ KALE F ME G PD V FIA++ ACSH+G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LV+EG F M + Y + P +EHY +DLL R+ + +AEE ++ +P + D I +
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASI---W 681
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
++L ACRT G+++ ER++ + + YA+ +W+ V+ +R +KD
Sbjct: 682 ASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Query: 251 GIKKVPG 257
I K PG
Sbjct: 742 HITKNPG 748
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KPD V S+L C L ++I++Y+ + ++++ V LI +YA+ G + + +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VFN ++ KDT SW SII G +G +A++LF+ M + + D +T++ ++S +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
++ G+ L HS + +L ID+ + G + ++ ++ + T + + +
Sbjct: 424 LKFGKGL-HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM--GTGDTVT--WN 478
Query: 192 ALLSACRTYGNIDMGERLATTL 213
++SAC +G+ G ++ T +
Sbjct: 479 TVISACVRFGDFATGLQVTTQM 500
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 70/128 (54%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PDK+ S++ CA E G +++ + + D VG AL+ MY++ G + ++
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF+ + +D SW S+I G + +G +ALE++ ++ PD T +VL A +
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221
Query: 131 LVEEGRKL 138
+V++G+ L
Sbjct: 222 VVKQGQGL 229
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++++ + D + L++ + L+ G+ +H ++ I +D V ALI MYA+ G
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V SL++F+ + DT +W ++I G L++ M PD TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C+ G+++ H + + L+ I++ + G L + + ++ +
Sbjct: 519 CASLAAKRLGKEI-HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD--- 574
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVK 217
V + ++ A YG GE+ T +++
Sbjct: 575 -VVTWTGMIYAYGMYGE---GEKALETFADME 602
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 138/248 (55%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+P ++S+L+ CA +L++GR +H ++ + D V + L+ MY + G + K+
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ KD W SII G A +G +AL++F M + G P+ VT IA+L+ACS+A
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYA 445
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G +EEG ++F SM S + + P +EHY +D+LGRAG + +A EL+ + + D +
Sbjct: 446 GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV--- 502
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL AC+T+ +D+ E A L + I AS +W DV VR M+
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT 562
Query: 250 LGIKKVPG 257
+ K PG
Sbjct: 563 NNVSKFPG 570
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 13 PDKFIVVS--LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
P K +V S ++ + G ++ R I D + E + V T +I Y Q+ V+ +
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVAR 223
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F + EK SWTS++ G ++G+ A E FE M KP + A++ G
Sbjct: 224 KLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM---KP-VIACNAMIVGFGEVG 279
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
+ + R++F M + + G I R G EA +L ++ Q P
Sbjct: 280 EISKARRVFDLMEDRDNAT-----WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 191 RALLSACRTYGNIDMGERLATTLTNVK 217
++LS C T ++ G ++ L +
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQ 361
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D + +V+LL+ CA AL G +H + R V ALI MYA+ G +E +
Sbjct: 203 GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ VFNG++++D +W S+I G ++G +A+ F M G +P+ +TF+ +L CSH
Sbjct: 263 IGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQ 322
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV+EG + F MSS +H+ PN++HYG +DL GRAG L + E++ D + L
Sbjct: 323 GLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV---L 379
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+R LL +C+ + N+++GE L ++ IY++A+ + +R ++
Sbjct: 380 WRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRS 439
Query: 250 LGIKKVPG 257
++ VPG
Sbjct: 440 HDLQTVPG 447
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD F L C + ++ IH V + + DA+V T+L++ Y+ +G VE + +
Sbjct: 104 RPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASK 163
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VF+ + +D SW +IC + G N+AL +++ M G D T +A+LS+C+H
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
+ G + H ++ + + ID+ + G L A
Sbjct: 224 LNMG-VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 137/251 (54%), Gaps = 7/251 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+P+ + SLL A L IH Y+ + M T L+ +Y++ G +E +
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 71 EVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
++FNG++EK D W ++I G M+G + AL++F M G P+++TF + L+AC
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
SH+GLVEEG LF M Y HY +DLLGRAG L EA L+ +P + +
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 187 VPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
+ ALL+AC T+ N+ +GE A L ++ IYA+ RW+D+ KVRS
Sbjct: 596 ---WGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSM 652
Query: 247 MKDLGIKKVPG 257
M+++G++K PG
Sbjct: 653 MENVGLRKKPG 663
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 2/201 (0%)
Query: 3 MCSLIVI-GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYA 61
+C L+ GV+P+ + SL++ C + + G+ +H + ++ D ++ T+LI MYA
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYA 365
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+ V+ VF+G + T W++II G N + AL LF+ M +P+ T +
Sbjct: 366 KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNS 425
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+L A + + + + ++ T M +L+ G + + + G L A ++ + ++
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGFM-SSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 182 TDEIIVPLYRALLSACRTYGN 202
V L+ AL+S +G+
Sbjct: 485 HKSKDVVLWGALISGYGMHGD 505
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V D +VS+L C LE GR +H V E R+ V AL+ MY + G ++++
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ ++ +D +WT +I G +G ALEL M+ G +P+ VT +++S C A
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDAL 333
Query: 131 LVEEGRKL 138
V +G+ L
Sbjct: 334 KVNDGKCL 341
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 10 GVK--PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
GVK PD + + + +++ G +H + + D V AL+ MY G VE
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +VF+ +K +D SW ++I G NG N AL +F+ M D T +++L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
H +E GR + H + + +E +++ + G + EA + ++
Sbjct: 230 HLKDLEMGRNV-HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 132/248 (53%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD F +VS+L+ CA GA + G + V N + + V A I MYA+ G + K+
Sbjct: 252 GVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKA 311
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + K SWT++I M+G L LF+ M G +PD F+ VLSACSH+
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL ++G +LF +M Y ++P EHY +DLLGRAG L EA E + +P + D +
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV--- 428
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL AC+ + N+DM E + + IY+ + E + ++R M++
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
Query: 250 LGIKKVPG 257
+K PG
Sbjct: 489 RAFRKKPG 496
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D ++ L+ C L GR +H + + + V + I MY + G VE
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + K +W ++I G + NG LEL+E M++ G PD T ++VLS+C+H
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
G + G ++ + S + PN+ I + R G L +A + +P
Sbjct: 271 GAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARAVFDIMP 319
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 3/177 (1%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S++ G PD F +L CA G+ +H +V + + V TALI MY + G
Sbjct: 43 SMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCG 102
Query: 65 CVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
V + +VF N + + + ++I G N K A +F M+ G D VT + +
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
+ C+ + GR L H + + FI + + G + L ++P
Sbjct: 163 VPLCTVPEYLWLGRSL-HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP 218
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 139/261 (53%), Gaps = 9/261 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDA--VVGTALIKMY 60
+ ++ G+KP LL+ + L+ G+ IH + + D ++ +L+ MY
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
A+ G +E + E+F + +KDT SW S+I GL+ +G +KAL LF+ M G KP+ VTF+
Sbjct: 514 AKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFL 573
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
VLSACSH+GL+ G +LF +M TY ++P ++HY IDLLGRAG L EAEE + LP
Sbjct: 574 GVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPF 633
Query: 181 QTDEIIVPLYRALLSAC----RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADR 236
D + Y ALL C R + ER A L + +YA R
Sbjct: 634 TPDHTV---YGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR 690
Query: 237 WEDVNKVRSKMKDLGIKKVPG 257
+ ++R +M G+KK PG
Sbjct: 691 HDMEKEMRKEMGIKGVKKTPG 711
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 27 QSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTS 86
++G LE + + V + + D V T++I Y ++G V ++ +F L +KD +WT
Sbjct: 380 KNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTV 436
Query: 87 IICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMS-ST 145
+I GL N +A L M G KP + T+ +LS+ +++G+ + ++ +T
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTT 496
Query: 146 YHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
P+L + + + G + +A E+ K+
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 7 IVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVG-TALIKMYAQSGC 65
++ V P++ IV TC A R +++ R M VV T ++ G
Sbjct: 98 VLFEVMPERNIV----TCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGR 153
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E ++E+F+ + E++ SW +++ GL NG KA ++F+AM + D V++ A++
Sbjct: 154 SEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKG 209
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+EE + LF MS + N+ + + R G + EA L ++P++
Sbjct: 210 YIENDGMEEAKLLFGDMS-----EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 138/251 (54%), Gaps = 6/251 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
++P++ VV +L+ CAQ+G L+ + IH + + D V +L+ +Y + G +E++
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA---KPDDVTFIAVLSAC 126
VF +K +W S+I A++G++ +A+ +FE M L KPD +TFI +L+AC
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
+H GLV +GR F M++ + ++P +EHYG IDLLGRAG EA E++ + + DE I
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 187 VPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
+ +LL+AC+ +G++D+ E L + +Y WE+ + R
Sbjct: 435 ---WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 247 MKDLGIKKVPG 257
+K K PG
Sbjct: 492 IKHQNAYKPPG 502
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 16 FIVVSLLTCCAQSGALEH---GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
++VV + + ++ H R + D ++E + V TA++ YA+SG + ++ +
Sbjct: 160 YVVVQTALLHSYASSVSHITLARQLFDEMSERNV----VSWTAMLSGYARSGDISNAVAL 215
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSHAGL 131
F + E+D SW +I+ NG +A+ LF M +P++VT + VLSAC+ G
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 176
++ + + H+ + + ++ +DL G+ G L EA + +
Sbjct: 276 LQLAKGI-HAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK 319
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 139/249 (55%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
++ D+ ++L A +L G+ +H ++ + + + G+ L+ MYA+ G ++ +
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++VF + +++ SW ++I A NG A+ F M G +PD V+ + VL+ACSH
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G VE+G + F +MS Y + P +HY +DLLGR G EAE+L+ ++P + DEI +
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI---M 623
Query: 190 YRALLSACRTYGNIDMGERLATTLTNV-KXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ ++L+ACR + N + ER A L ++ K IYA+A WE V V+ M+
Sbjct: 624 WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMR 683
Query: 249 DLGIKKVPG 257
+ GIKKVP
Sbjct: 684 ERGIKKVPA 692
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV--VGTALIKMYAQSGCV 66
+G F ++L+ A +L+ GR +H D++ VG +L+ MYA+
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLH--CQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
E++ +F L ++ T SWT++I G G L+LF M + D TF VL A
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+ + G++L + + +++ N+ G +D+ + G + +A ++ ++PD+
Sbjct: 463 ASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 5/249 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVV--GTALIKMYAQSGCVEK 68
V P+ V SL + CA G+L G +H Y + + + V GTAL+ YA+ G +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +F+ ++EK+T +W+++I G G T +LELFE M KP++ TF ++LSAC H
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGH 558
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G+V EG+K F SM Y+ P+ +HY +D+L RAG L +A +++ K+P Q D V
Sbjct: 559 TGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD---VR 615
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ A L C + D+GE + + ++ +YAS RW +VR+ MK
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMK 675
Query: 249 DLGIKKVPG 257
G+ K+ G
Sbjct: 676 QRGLSKIAG 684
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
+++ +L+ C + AL G+W H + ++ I + + + T+L+ MY + G + + VF
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
N D WT++I G NG N+AL LF+ M+ + KP+ VT +VLS C +E
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLE 360
Query: 134 EGRK------------------LFHSMSSTYHMK-----------PNLEHYGGFIDLLGR 164
GR L H + Y + ++ + I +
Sbjct: 361 LGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 165 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
G +HEA L ++ ++ +L SAC + G++ +G L
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ +KP+ + S+L+ C LE GR +H + I D V AL+ MYA+
Sbjct: 337 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRD 395
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ VF EKD +W SII G + NG ++AL LF M + P+ VT ++ SAC+
Sbjct: 396 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 455
Query: 129 AGLVEEGRKL 138
G + G L
Sbjct: 456 LGSLAVGSSL 465
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G + D + L C + L++G+ IH + + D VV T L+ MYA+ G ++ +
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSA 195
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VFN + ++ WTS+I G N + L LF M ++ T+ ++ AC+
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 130 GLVEEGRKLFH 140
+ +G K FH
Sbjct: 256 SALHQG-KWFH 265
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
LL+ C +L R H + N +M D + T L+ +Y G + + VF+ + E D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 140
W ++ +N ++ + ++L++ + G + DD+ F L AC+ ++ G+K+
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 141 SMSSTYHMKPNLEH--YGGFIDLLGRAGLLHEAEELVRKL 178
+ P+ ++ G +D+ + G + A ++ +
Sbjct: 167 QLVKV----PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDI 202
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 143/249 (57%), Gaps = 4/249 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G +PD +V +L C+Q G+L+ GR +H Y+ + ++ D V TAL+ MY++ G +
Sbjct: 312 LGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL-DRVTATALMDMYSKCGALSS 370
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
S E+F + KD W ++I ++G + + LF M +PD TF ++LSA SH
Sbjct: 371 SREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSH 430
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+GLVE+G+ F M + Y ++P+ +HY IDLL RAG + EA +++ ++ D + P
Sbjct: 431 SGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN--SEKLDNAL-P 487
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
++ ALLS C + N+ +G+ A + + +A+A++W++V KVR M+
Sbjct: 488 IWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMR 547
Query: 249 DLGIKKVPG 257
+ ++KVPG
Sbjct: 548 NGAMEKVPG 556
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G D+ +++ LL G + GR +H Y+ + ++ VV T+L+ MYA+ G +E +
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + K SW S+I G A NG NKA E M++LG +PD VT + VL ACS
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
G ++ GR L H H+ + +D+ + G L + E+
Sbjct: 332 GSLKTGR-LVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREI 374
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGR--WIH--DYVNENRIMVDAVVGTALIKMY 60
+I ++PD + C LE G W D+ +N D V ++++ +Y
Sbjct: 106 QMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN----DVFVCSSVLNLY 161
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
+ G ++++ +F + ++D WT+++ G A GK+ KA+E + M+ G D V +
Sbjct: 162 MKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVML 221
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
+L A G + GR + H + N+ +D+ + G + A + ++
Sbjct: 222 GLLQASGDLGDTKMGRSV-HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMF 280
Query: 181 QT 182
+T
Sbjct: 281 KT 282
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 143/252 (56%), Gaps = 4/252 (1%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
+ G +P+K V++L+ C+ G+ IH + V ++LI MY++ GC+
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSAC 126
+ + F+ +++D W+S+I +G+ ++A+ELF M E + ++V F+ +L AC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
SH+GL ++G +LF M Y KP L+HY +DLLGRAG L +AE ++R +P +TD +I
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 364
Query: 187 VPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
++ LLSAC + N +M +R+ + + ++ASA RW DV++VR
Sbjct: 365 ---WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKS 421
Query: 247 MKDLGIKKVPGI 258
M+D +KK GI
Sbjct: 422 MRDKNVKKEAGI 433
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G PD++ + S+ + A ++ G+ IH Y + + +D VV ++L MY ++G ++
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
V + ++ +W ++I G A NG L L++ M+ G +P+ +TF+ VLS+CS
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+ +G+++ H+ + + I + + G L +A + + D+ DE+
Sbjct: 205 LAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DEV--- 259
Query: 189 LYRALLSACRTYGNIDMGERLATTLT 214
++ +++SA +G D L T+
Sbjct: 260 MWSSMISAYGFHGQGDEAIELFNTMA 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 56 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 115
LI Y ++G + + +VF+ + ++ +W ++I GL + L LF M LG PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 116 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 175
+ T +V S + V G+++ H + Y ++ +L + R G L + E ++
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQI-HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 176 RKLP 179
R +P
Sbjct: 150 RSMP 153
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 139/239 (58%), Gaps = 3/239 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KP+++ + ++L+ C++SGAL G IH Y+ +N I +D +GTAL+ MYA+ G ++ +
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + KD SWT++I G A++G+ ++A++ F M G KPD+V F+AVL+AC ++
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
V+ G F SM Y ++P L+HY +DLLGRAG L+EA ELV +P D +
Sbjct: 408 SEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD---LTT 464
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ AL AC+ + E ++ L + +AS +DV K R ++
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQ 523
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 67/260 (25%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIH----DYVNENRIMVDAVV-------------- 52
V D F+ +SL+ A++G L+H + D + + I++ V+
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 53 -------------GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNK 99
+ LIK Y SG + ++ ++F + EK+ SWT++I G + G
Sbjct: 217 TLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYET 276
Query: 100 ALELFEAMETLGAKPDDVTFIAVLSACSHAG-----------LVEEGRKLFHSMSSTY-- 146
A+ + M G KP++ T AVLSACS +G +++ G KL ++ +
Sbjct: 277 AISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVD 336
Query: 147 ------------HMKPNLEH-----YGGFIDLLGRAGLLHEAEELVRKL---PDQTDEII 186
+ N+ H + I G H+A + R++ ++ DE++
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV 396
Query: 187 VPLYRALLSACRTYGNIDMG 206
+ A+L+AC +D+G
Sbjct: 397 ---FLAVLTACLNSSEVDLG 413
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 13 PDKFIVVSLLTCCAQSGALEH--GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
PD+ +SL+ C + +L H + + V +R+ V ++L+K + SL
Sbjct: 27 PDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLK------SPDYSL 80
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F +E++ ++I GL N + ++ F M LG KPD +TF VL + S G
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
GR L H+ + + + +D+ + G L A ++ + PD+ + + ++
Sbjct: 141 FRWLGRAL-HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIW 199
Query: 191 RALLSA-CRTYGNIDMGERLATTL 213
L++ CR DM +ATTL
Sbjct: 200 NVLINGYCRAK---DM--HMATTL 218
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 136/249 (54%), Gaps = 3/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + SLL C+Q L G+ +H Y N + V TALI MYA+ G ++
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF +K TA+W S+I G +++G ++AL + M G KPD++TF+ VLSAC+H
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHG 563
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G V+EG+ F +M + + P L+HY + LLGRA L EA L+ K+ + D +
Sbjct: 564 GFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAV--- 620
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALLSAC + +++GE +A + + +YA+ W+DV +VR+ MKD
Sbjct: 621 WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Query: 250 LGIKKVPGI 258
G G+
Sbjct: 681 NGYDGYLGV 689
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 52 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 111
V T+L+ +Y + GCV + +F+ + E+DT W ++ICG + NG A +LF M G
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG 146
Query: 112 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
P T + +L C G V +GR + H +++ ++ + + I + L A
Sbjct: 147 FSPSATTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 172 EELVRKLPDQT 182
E L R++ D++
Sbjct: 206 EVLFREMKDKS 216
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+K D +V +L C +S ++ G +H Y ++ + +V LI MY++ VE L
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 402
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLGAKPDDVTFIAVLSACSHA 129
+F L+E SW S+I G +G+ + A E+F + M T G PD +T ++L+ CS
Sbjct: 403 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYG----GFIDLLGRAGLLHEAEELVRKL 178
+ G++L Y ++ N E+ ID+ + G +AE + + +
Sbjct: 463 CCLNLGKEL-----HGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P +V+LL C Q G + GR +H ++ + +D+ V ALI Y++ + +
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+F +K+K T SW ++I + +G +A+ +F+ M + VT I +LSA
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 137/249 (55%), Gaps = 3/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+ D +V ++L +L G+ +H V + + + V LI MY++ G + S
Sbjct: 352 GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF + +++ SW S+I A +G AL+L+E M TL KP DVTF+++L ACSH
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHV 471
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL+++GR+L + M + ++P EHY ID+LGRAGLL EA+ + LP + D +
Sbjct: 472 GLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD---CKI 528
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
++ALL AC +G+ ++GE A L IY+S +W++ K +MK
Sbjct: 529 WQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKA 588
Query: 250 LGIKKVPGI 258
+G+ K GI
Sbjct: 589 MGVTKETGI 597
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P+ +S L C+ S + G+ IH + + I + + +AL+ MY++ G +E +
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F E D S T I+ GLA NG +A++ F M G + D AVL
Sbjct: 312 TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN 371
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ G++L HS+ N G I++ + G L +++ + R++P +
Sbjct: 372 SLGLGKQL-HSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRN 422
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 52 VGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG 111
VG LI Y + GC VF+G+ ++ + T++I GL N L LF M
Sbjct: 192 VGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL 251
Query: 112 AKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
P+ VT+++ L+ACS + + EG+++ H++ Y ++ L +D+ + G + +A
Sbjct: 252 VHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDA 310
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 143/247 (57%), Gaps = 4/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++PD+ + S+++ +Q G G W+ Y+ E+ I +D ++ T+LI +Y + G K+
Sbjct: 327 IQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F+ L +KDT S++++I G +NG +A LF AM P+ VTF +LSA SH+G
Sbjct: 387 KMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 446
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LV+EG K F+SM ++++P+ +HYG +D+LGRAG L EA EL++ +P Q + ++
Sbjct: 447 LVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPN---AGVW 502
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
ALL A + N++ GE + ++ IY+S RW+D VR +K+
Sbjct: 503 GALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEK 562
Query: 251 GIKKVPG 257
+ K G
Sbjct: 563 KLCKTLG 569
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P V S+L C + + G+ IH +N + V T L+ +Y++ G +E +
Sbjct: 99 GIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELA 158
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ F+ + EK+T SW S++ G +G+ ++A +F+ + + D V++ ++S+ +
Sbjct: 159 KKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVSWNLIISSYAKK 214
Query: 130 GLVEEGRKLFHSM 142
G + LF +M
Sbjct: 215 GDMGNACSLFSAM 227
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
SLL +SG L+ R + D + E DAV +I YA+ G + + +F+ + K
Sbjct: 175 SLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLK 230
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
ASW +I G + A F+AM + + V++I ++S + G V+ +LF
Sbjct: 231 SPASWNILIGGYVNCREMKLARTYFDAM----PQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD-----QTDEIIVPLYRALL 194
MS K + Y I + G +A +L ++ + Q DEI + +++
Sbjct: 287 RLMS-----KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLS---SVV 338
Query: 195 SACRTYGNIDMGERLATTLT 214
SA GN G + + +T
Sbjct: 339 SANSQLGNTSFGTWVESYIT 358
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 147/251 (58%), Gaps = 11/251 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWI-HDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++ + VV+ L C+ G ++ G I H Y N+N +V A I MY++ G V+K
Sbjct: 205 GIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDK 259
Query: 69 SLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ +VF +K +W ++I G A++G+ ++ALE+F+ +E G KPDDV+++A L+AC
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACR 319
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
HAGLVE G +F++M+ ++ N++HYG +DLL RAG L EA +++ + D +
Sbjct: 320 HAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV-- 376
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
L+++LL A Y +++M E + + + +YA+ RW+DV +VR M
Sbjct: 377 -LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDM 435
Query: 248 KDLGIKKVPGI 258
+ +KK+PG+
Sbjct: 436 ESKQVKKIPGL 446
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 33/221 (14%)
Query: 19 VSLLTC------CAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
V LTC CA++ +H +N + D+++ T L+ Y+++G + + ++
Sbjct: 107 VDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + +D ASW ++I GL + ++A+EL++ MET G + +VT +A L ACSH G V
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 133 EEGRKLFHSMSSTYHMKPN--LEHYG--GFID---------------------LLGRA-- 165
+EG +FH S+ + N ++ Y GF+D + G A
Sbjct: 227 KEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 166 GLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMG 206
G H A E+ KL D + Y A L+ACR G ++ G
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 136/246 (55%), Gaps = 5/246 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P + + CA GA +G+ H + + G ALI MYA+ G VE++
Sbjct: 412 GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF + D+ SW ++I L +G +A++++E M G +PD +T + VL+ACSHA
Sbjct: 472 RQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHA 531
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP-DQTDEIIVP 188
GLV++GRK F SM + Y + P +HY IDLL R+G +AE ++ LP T EI
Sbjct: 532 GLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEI--- 588
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ ALLS CR +GN+++G A L + ++A+ +WE+V +VR M+
Sbjct: 589 -WEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMR 647
Query: 249 DLGIKK 254
D G+KK
Sbjct: 648 DRGVKK 653
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYV------------------------ 41
++ G++ D+F S++ CA +G L+ G+ +H YV
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKF 336
Query: 42 NENRIMV------DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNG 95
+E R + D V AL+ Y SG + ++ +F +KEK+ SW +I GLA NG
Sbjct: 337 DEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENG 396
Query: 96 KTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHY 155
+ L+LF M+ G +P D F + +C+ G G++ +H+ +L
Sbjct: 397 FGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-YHAQLLKIGFDSSLSAG 455
Query: 156 GGFIDLLGRAGLLHEAEELVRKLP 179
I + + G++ EA ++ R +P
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMP 479
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++I G +P I+ L+ +S L + R + D ++E D + T ++ Y SG
Sbjct: 39 NIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVSGYCASG 94
Query: 65 CVEKSLEVFNGLK--EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
+ + VF +DT + ++I G + N A+ LF M+ G KPD+ TF +V
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA------------GLLHE 170
L+ + E+ FH+ + L+ G+I + A LLH
Sbjct: 155 LAGLALVADDEKQCVQFHAAA--------LKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 171 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
A RK+ D+ E + +++ G D+GE L
Sbjct: 207 A----RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL 241
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
Query: 18 VVSLLTCCAQSGALEH-GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGL 76
+VS+ + CA S +L H R + D + E D T ++ Y ++G + E+ G+
Sbjct: 190 LVSVYSKCASSPSLLHSARKVFDEILEK----DERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 77 KEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
+ ++ ++I G G +ALE+ M + G + D+ T+ +V+ AC+ AGL++ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 136 RK----LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
++ + ++H +L + L + G EA + K+P + + +
Sbjct: 306 KQVHAYVLRREDFSFHFDNSL------VSLYYKCGKFDEARAIFEKMPAKD----LVSWN 355
Query: 192 ALLSACRTYGNI 203
ALLS + G+I
Sbjct: 356 ALLSGYVSSGHI 367
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 138/245 (56%), Gaps = 3/245 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P++ ++L+ C++ +L HGR H V ++ + D+ V TAL MY + G ++ + +
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + K+T W +I G NG+ ++A+ L+ M + G KPD +TF++VL+ACSH+GLV
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLV 636
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
E G ++ SM + ++P L+HY +D LGRAG L +AE+L P ++ + L+
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSV---LWEI 693
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LLS+CR +G++ + R+A L + Y+S +W+D ++ M +
Sbjct: 694 LLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRV 753
Query: 253 KKVPG 257
K PG
Sbjct: 754 HKTPG 758
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KPDK + +L+ CA+ LE G+ IH V I ++ + + LI +Y++ +E S
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471
Query: 71 EVFNG-LKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
+F+ + E D A W S+I G N KAL LF M +T P++ +F VLS+CS
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 129 AGLVEEGRKLFHSM 142
+ GR+ FH +
Sbjct: 532 LCSLLHGRQ-FHGL 544
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D + +L+++YA++ + + +F + E + SW +I G +++K++E M
Sbjct: 283 DLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR 342
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G +P++VT I+VL AC +G VE GR++F S+ +P++ + +
Sbjct: 343 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHY 397
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
EA R++ Q + +LS+C ++ G+++
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +G+K D ++ LL + G ++ R + D ++ + D A + + G
Sbjct: 32 IVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS----VRDVYSWNAFLTFRCKVGD 87
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ ++ EVF+G+ E+D SW ++I L G KAL +++ M G P T +VLSA
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 126 CS 127
CS
Sbjct: 148 CS 149
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG- 64
++ G P +F + S+L+ C++ G H + + + VG AL+ MYA+ G
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
V+ + VF L + + S+T++I GLA K +A+++F M G + D V +LS
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 139/248 (56%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G KP F + SLL+ +E GR +H + ++ V ++LI MY++ G ++++
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F D S T++I G A +GK+ +A++LFE +G +PD VTFI+VL+AC+H+
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G ++ G F+ M TY+M+P EHYG +DLL RAG L +AE+++ ++ + D+++
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV--- 582
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LL AC+ G+I+ G R A + + IY+S E+ VR MK
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 250 LGIKKVPG 257
G+ K PG
Sbjct: 643 KGVIKEPG 650
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V PD ++ +L C QS + +G +H Y + ++ VG++L+ MY + G ++KS
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + ++ +WT+II GL G+ + L F M D TF L AC+
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 130 GLVEEGRKL 138
V+ G+ +
Sbjct: 223 RQVKYGKAI 231
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P++ S+ + CA L G +H V + V +++KMY+ G + +
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F G++ +D SW++II G G + + F M G KP D ++LS +
Sbjct: 366 VLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA 425
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
++E GR++ H+++ + ++ N I++ + G + EA
Sbjct: 426 VIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D + L CA +++G+ IH +V + V +L MY + G ++ L +F
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ E+D SWTS+I G+ KA+E F M P++ TF ++ SAC+ +
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV 327
Query: 134 EGRKL 138
G +L
Sbjct: 328 WGEQL 332
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 139/249 (55%), Gaps = 3/249 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G +PD+ +++L C G + + IH + + + TAL+ +Y++ G +E
Sbjct: 229 VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLED 288
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
S VF+ + D+ +WT+++ A +G A++ FE M G PD VTF +L+ACSH
Sbjct: 289 SSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSH 348
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+GLVEEG+ F +MS Y + P L+HY +DLLGR+GLL +A L++++P +
Sbjct: 349 SGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSS---G 405
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
++ ALL ACR Y + +G + A L ++ IY+++ W+D +++R+ MK
Sbjct: 406 VWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMK 465
Query: 249 DLGIKKVPG 257
G+ + G
Sbjct: 466 QKGLVRASG 474
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 29/205 (14%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G +P++ +S+++ C G+ E GR IH V + ++ + V A I Y ++G +
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
S ++F L K+ SW ++I NG K L F +G +PD TF+AVL +C
Sbjct: 188 SCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCED 247
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGF----------IDLLGRAGLLHEAEELVRKL 178
G+V + + L +GGF +DL + G L ++ + ++
Sbjct: 248 MGVVRLAQGIH-----------GLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEI 296
Query: 179 --PDQTDEIIVPLYRALLSACRTYG 201
PD + A+L+A T+G
Sbjct: 297 TSPDSM------AWTAMLAAYATHG 315
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 18 VVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG---CVEKSLEVFN 74
V SL+ ++E R +H V ++ +G L+ Y + G C EK +F+
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEK---LFD 90
Query: 75 GLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSACSHAGLV 132
+ E+D SW S+I G + G K E+ M +G +P++VTF++++SAC + G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL-----VRKLPDQTDEIIV 187
EEGR H + + + ++ FI+ G+ G L + +L ++ L I++
Sbjct: 151 EEGR-CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 188 PLYRALLSACRTYGNI 203
L L Y N+
Sbjct: 210 HLQNGLAEKGLAYFNM 225
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + S+L + + +L G+ +H Y I D + ALI MY + G + +
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F ++ K +W +I G +G AL LF+ M+ G PDDVTF++++SAC+H+
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G VEEG+ +F M Y ++PN+EHY +DLLGRAGLL EA ++ +P + D I
Sbjct: 692 GFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSI--- 748
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LLSA RT+ N+++G A L ++ +Y A + K+ MK+
Sbjct: 749 WLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKE 808
Query: 250 LGIKKVPG 257
G+ K PG
Sbjct: 809 KGLHKQPG 816
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD F + ++++CC+ G +G+ +H + + I + + +AL+ +Y++ GC +
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSACSH 128
VF ++EKD +W S+I GL NGK +AL++F M + KPD +V +AC+
Sbjct: 429 LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 167
+ G ++ SM T + N+ IDL + GL
Sbjct: 489 LEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGL 526
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KPD I+ S+ CA AL G +H + + ++++ VG++LI +Y++ G E +L
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF + ++ +W S+I + N +++LF M + G PD V+ +VL A S
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ +G+ L H + + + ID+ + G AE + +K+ ++
Sbjct: 592 SLLKGKSL-HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS 642
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 6 LIVIGVKPDKF---IVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
++V GV+PD F IVVS++ C + E G+ IH ++ N + D+ + TALI MY +
Sbjct: 159 MLVFGVRPDAFSLSIVVSVM-CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK 217
Query: 63 SGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
G + VF +++K + W +I G +G +L+L+ + K +F
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 122 VLSACSHAGLVEEGRKLFHSMSST-YHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
L ACS + GR++ + H P + + + + G++ EAE + + D
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPYV--CTSLLSMYSKCGMVGEAETVFSCVVD 335
Query: 181 QTDEIIVPLYRALLSACRTYGNIDM 205
+ EI + A Y +D+
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDL 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 22 LTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDT 81
L C+QS GR IH V + + D V T+L+ MY++ G V ++ VF+ + +K
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 82 ASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
W +++ A N AL+LF M PD T V+S CS GL G+ +
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSV 395
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 16 FIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNG 75
F SLL C+ L +G+ IH V D + T+L+ MY + G ++ +++VF+G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 76 LKE-------KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA-CS 127
+ +D W S+I G + + + F M G +PD + V+S C
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
E K H + + ID+ + GL +A + ++ D+++ ++
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++P+++ V +++ CA AL G I Y ++ I V T+ I MYA+SG + +
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF ++ D A+++++I LA +G N+AL +FE+M+T G KP+ F+ VL AC H G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
LV +G K F M + Y + PN +H+ +DLLGR G L +AE L+ Q + +
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVT---W 631
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
RALLS+CR Y + +G+R+A L ++ IY + +VR M+D
Sbjct: 632 RALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDR 691
Query: 251 GIKKVPGI 258
G+KK P +
Sbjct: 692 GVKKEPAL 699
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++P +L C+ + LE+GR IH + +N D +G+ALI++YA G E
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++ F ++D ASWTS+I N + A +LF + + +P++ T ++SAC+
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADF 472
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGF----IDLLGRAGLLHEAEELVRKL--PDQTD 183
+ G ++ Y +K ++ + I + ++G + A ++ ++ PD
Sbjct: 473 AALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPD--- 524
Query: 184 EIIVPLYRALLSACRTYGNID 204
V Y A++S+ +G+ +
Sbjct: 525 ---VATYSAMISSLAQHGSAN 542
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 21 LLTCCAQ--SGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE 78
L CC G +E G IH Y + + D VV TAL+ MYA++G +++++++F+ +
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS 315
Query: 79 KDTASWTSIICG-LAMNGKTN----KALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
K+ ++ ++I G L M+ T+ +A +LF M+ G +P TF VL ACS A +E
Sbjct: 316 KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLE 375
Query: 134 EGRKL 138
GR++
Sbjct: 376 YGRQI 380
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 8/188 (4%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+K DKF L C + L+ G +H V N + + LI MY++ G +++++
Sbjct: 144 LKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 203
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS--- 127
+F+ E+D SW S+I G G + L L M G +VL AC
Sbjct: 204 SLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINL 263
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
+ G +E+G + H ++ M+ ++ +D+ + G L EA +L +P + V
Sbjct: 264 NEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKN----V 318
Query: 188 PLYRALLS 195
Y A++S
Sbjct: 319 VTYNAMIS 326
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 143/249 (57%), Gaps = 5/249 (2%)
Query: 11 VKPDKFIVVSLLTCCAQ--SGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ P++ VS+L+ CA G + G+ IH YV I++ +GTAL+ MY ++G +E
Sbjct: 217 ITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEM 276
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+L +F+ +++K +W +II LA NG+ +ALE+FE M++ P+ +T +A+L+AC+
Sbjct: 277 ALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+ LV+ G +LF S+ S Y + P EHYG +DL+GRAGLL +A ++ LP + D ++
Sbjct: 337 SKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLG 396
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
ALL AC+ + N ++G + L ++ A W + K+R M
Sbjct: 397 ---ALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMI 453
Query: 249 DLGIKKVPG 257
+ GI+K+P
Sbjct: 454 EAGIRKIPA 462
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS- 69
V+P+ SL+ S ++ +G +H + + D V T+ ++ Y + G +E S
Sbjct: 82 VQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSR 141
Query: 70 ------------------------------LEVFNGLKEKDTASWTSIICGLAMNGKTNK 99
E F + D SWT++I G + G K
Sbjct: 142 KMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAK 201
Query: 100 ALELFEAM---ETLGAKPDDVTFIAVLSACSH--AGLVEEGRKLFHSMSSTYHMKPNLEH 154
AL +F M E P++ TF++VLS+C++ G + G+++ H + +
Sbjct: 202 ALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQI-HGYVMSKEIILTTTL 260
Query: 155 YGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 201
+D+ G+AG L E+ + DQ + V + A++SA + G
Sbjct: 261 GTALLDMYGKAGDL----EMALTIFDQIRDKKVCAWNAIISALASNG 303
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 145/252 (57%), Gaps = 6/252 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHG-RWIHDYVNENRIMVD-AVVGTALIKMYAQSGCVE 67
G++ D+ V ++ CAQ GA ++ R + D V+G+ALI MY++ G VE
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSAC 126
+++ VF + K+ +++S+I GLA +G+ +AL LF M T KP+ VTF+ L AC
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
SH+GLV++GR++F SM T+ ++P +HY +DLLGR G L EA EL++ + + E
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM---SVEPH 452
Query: 187 VPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
++ ALL ACR + N ++ E A L ++ +YASA W V +VR
Sbjct: 453 GGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKL 512
Query: 247 MKDLGIKKVPGI 258
+K+ G+KK P +
Sbjct: 513 IKEKGLKKTPAV 524
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D + T LI YA+ G +E + E+F L KD +WT+++ G A N K +ALE F+ ME
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEG-RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 167
G + D+VT +SAC+ G + R + + S Y ++ ID+ + G
Sbjct: 274 KSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 168 LHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 201
+ EA + + ++ V Y +++ T+G
Sbjct: 334 VEEAVNVFMSMNNKN----VFTYSSMILGLATHG 363
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 11/258 (4%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDY-VNENRIMVDAVVGTALIKMYAQSG 64
+I + K D+ +V S+L C ++ GR IH + + ++I D +G +LI MYA+SG
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+E ++ F +KEKD SWTS+I G +G KA++L+ ME KP+DVTF+++LS
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH G E G K++ +M + + ++ EH ID+L R+G L EA L+R + E
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR-----SKE 481
Query: 185 IIVPL----YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDV 240
IV L + A L ACR +GN+ + + AT L +++ +YA+ W++
Sbjct: 482 GIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNA 541
Query: 241 NKVRSKMKDLG-IKKVPG 257
R MK+ G K PG
Sbjct: 542 LNTRKLMKESGSCNKAPG 559
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VK ++F S+L C G L+ G IH V + + +V +AL+ +YA+ G +E++
Sbjct: 109 VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
F+ +KE+D SW ++I G N + + LF+ M T G KPD TF ++L A
Sbjct: 169 LQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 56 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 115
LI +Y + G V+ + ++F+ + ++D SWT++I + G AL LF+ M K +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 116 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 172
T+ +VL +C G ++EG ++ H + NL + L R G + EA
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQI-HGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 32/242 (13%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G KPD F SLL LE +H + + + +L+ Y + G
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGS 264
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAM-NGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + ++ G K++D S T++I G + N T+ A ++F+ M + K D+V ++L
Sbjct: 265 LANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA----EELVRKLPD 180
C+ V GR++ + ++ ++ ID+ ++G + +A EE+ K
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVR 384
Query: 181 QTDEII------------VPLYR---------------ALLSACRTYGNIDMGERLATTL 213
+I + LY +LLSAC G ++G ++ T+
Sbjct: 385 SWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTM 444
Query: 214 TN 215
N
Sbjct: 445 IN 446
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 136/248 (54%), Gaps = 3/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P+++ LL A+ L+ G +H V ++ +VG AL+ MYA+SG +E +
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+ F+G+ +D +W ++I G + +G +ALE F+ M G P+ +TFI VL ACSH G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
VE+G F+ + + ++P+++HY + LL +AG+ +AE+ +R P + D V +
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWD---VVAW 510
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
R LL+AC N +G+++A I+A + WE V KVRS M +
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 251 GIKKVPGI 258
G+KK PG+
Sbjct: 571 GVKKEPGV 578
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 21 LLTCCAQSGALEHGRWIHDYV---NENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
LL CA S L G IH ++ N++ DA +LI +Y + ++ ++F+ +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLSACSHAGLVEEGR 136
E++ SW +++ G +G + L+LF++M G ++P++ V +CS++G +EEG+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 137 KLFH 140
+ FH
Sbjct: 157 Q-FH 159
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 139/254 (54%), Gaps = 12/254 (4%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALE-----HGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
IG +PD V + + C+ + HG I ++ NRI V+ ALI +Y +S
Sbjct: 339 IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN----NALISLYYKS 394
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
G ++ + VF+ + E + S+ +I G A +G +AL L++ M G P+ +TF+AVL
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
SAC+H G V+EG++ F++M T+ ++P EHY IDLLGRAG L EAE + +P +
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
+ + ALL ACR + N+ + ER A L ++ +YA A +WE++ V
Sbjct: 515 SVA---WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASV 571
Query: 244 RSKMKDLGIKKVPG 257
R M+ I+K PG
Sbjct: 572 RKSMRGKRIRKKPG 585
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G K D F + S+L L GR H + + ++ VG+ LI Y++ G
Sbjct: 231 MIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 66 VE---KSLEVFNGLKEKDTASWTSIICGLAMNGK-TNKALELFEAMETLGAKPDDVTFIA 121
+ S +VF + D W ++I G +MN + + +A++ F M+ +G +PDD +F+
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPN-LEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
V SACS+ + +++ H ++ H+ N + I L ++G L +A + ++P+
Sbjct: 351 VTSACSNLSSPSQCKQI-HGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Query: 181 ----------------------------QTDEIIVP---LYRALLSACRTYGNIDMGERL 209
D I P + A+LSAC G +D G+
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 210 ATTL 213
T+
Sbjct: 470 FNTM 473
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 9 IGVKPDKFIVVSLLT-CCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
+G + D F + L+ CC + ++ +H + + V A + Y++ G +
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQ---LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 68 KSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+++ VF G+ E +D SW S+I + + KAL L++ M G K D T +VL+A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 127 SHAGLVEEGRKLFHS--MSSTYHMKPNLEHYGGFIDLLGRAG---LLHEAEELVRKL--P 179
+ + GR+ FH + + +H ++ G ID + G ++++E++ +++ P
Sbjct: 251 TSLDHLIGGRQ-FHGKLIKAGFHQNSHVG--SGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 180 D 180
D
Sbjct: 308 D 308
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 56 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 115
++K YA+ + + ++F+ + + DT S+ ++I G A +T A+ LF+ M LG + D
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 116 DVTFIAVLSA-CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
T +++A C L+++ H S + F+ + GLL EA +
Sbjct: 140 GFTLSGLIAACCDRVDLIKQ----LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 175 VRKLPDQTDEI 185
+ + DE+
Sbjct: 196 FYGMDELRDEV 206
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 134/240 (55%), Gaps = 3/240 (1%)
Query: 18 VVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
+ ++L C++ AL G+ IH + +++ D + +L+ MY + G VE S VF+ +
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
KD ASW ++ A+NG + + LFE M G PD +TF+A+LS CS GL E G
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 197
LF M + + + P LEHY +D+LGRAG + EA +++ +P + I + +LL++C
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI---WGSLLNSC 516
Query: 198 RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPG 257
R +GN+ +GE A L ++ IYA A W++V+K+R MK G+KK G
Sbjct: 517 RLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAG 576
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
+CS I +P F + L C L GR IH + + + VD VV L+K+Y +
Sbjct: 228 LCSFI----EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
SG + + +VF+G+ E++ +W S+I L+ + ++ LF M+ T +
Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 166
L ACS + G+++ H+ KP++ +D+ G+ G
Sbjct: 344 LPACSRVAALLTGKEI-HAQILKSKEKPDVPLLNSLMDMYGKCG 386
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 136/252 (53%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+++ G D F + S+L A S G +H Y+ + + + VG++L+ MY++ G
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ + F+ + D +WT++I A +GK N+AL+++ M+ G KPD VTF+ VLSA
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSH GLVEE +SM Y ++P HY +D LGR+G L EAE + + + D +
Sbjct: 763 CSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL 822
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
+ + LL+AC+ +G +++G+ A ++ I A W++V + R
Sbjct: 823 V---WGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRK 879
Query: 246 KMKDLGIKKVPG 257
MK G++K PG
Sbjct: 880 LMKGTGVQKEPG 891
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D+F V SLL+ L G+ +H Y ++ +++D VG++L +Y++ G +E+S
Sbjct: 448 GLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F G+ KD A W S+I G G +A+ LF M G PD+ T AVL+ CS
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
+ G+++ H + + ++ +++ + G L A ++ +LP+
Sbjct: 565 PSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE 614
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV----DAVVGTALIKMYAQSGCVE 67
KPD + S+L CA L G+ V + R++ D V TA++ +YA+ G +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGK-----VVQARVIKCGAEDVFVCTAIVDLYAKCGHMA 302
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+++EVF+ + SWT ++ G + ALE+F+ M G + ++ T +V+SAC
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 128 HAGLVEEGRKLFHS--MSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+V E ++ H+ S +++ ++ I + ++G + +E++ L D +
Sbjct: 363 RPSMVCEASQV-HAWVFKSGFYLDSSVA--AALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 186 IV 187
IV
Sbjct: 420 IV 421
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G PD+ + ++LT C+ +L G+ IH Y I +G+AL+ MY++ G ++ +
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+V++ L E D S +S+I G + +G LF M G D ++L A
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+ + V S+++ C + + +H +V ++ +D+ V ALI MY++SG ++ S
Sbjct: 346 GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS 405
Query: 70 LEVFNGLKEKDTASWTSI-ICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA--C 126
+VF L + + ++ I + + K KA+ LF M G + D+ + ++LS C
Sbjct: 406 EQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC 465
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
+ G K H + + +L L + G L E+ +L + +P + +
Sbjct: 466 LNLG------KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN--- 516
Query: 187 VPLYRALLSACRTYG 201
+ +++S YG
Sbjct: 517 -ACWASMISGFNEYG 530
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 134/246 (54%), Gaps = 4/246 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD+F +++T +++ G+ H + + + + + AL+ MYA+ G E + +
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F+ +D W S+I A +G+ KAL++ E M + G +P+ +TF+ VLSACSHAGL
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
VE+G K F M + ++P EHY + LLGRAG L++A EL+ K+P + I+ +R
Sbjct: 672 VEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV---WR 727
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
+LLS C GN+++ E A IYAS W + KVR +MK G
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 252 IKKVPG 257
+ K PG
Sbjct: 788 VVKEPG 793
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 13/195 (6%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V PD +I+ ++L+ C+ LE G+ IH ++ + +DA + LI Y + G V +
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++FNG+ K+ SWT+++ G N +A+ELF +M G KPD ++L++C A
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC--AS 362
Query: 131 LVEEGRKLFHSMSSTYHMKPNL--EHY--GGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
L G F + Y +K NL + Y ID+ + L +A RK+ D
Sbjct: 363 LHALG---FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA----RKVFDIFAAAD 415
Query: 187 VPLYRALLSACRTYG 201
V L+ A++ G
Sbjct: 416 VVLFNAMIEGYSRLG 430
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRW----IHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
P+++I+ S + C SG GRW + ++ ++ D VGT LI Y + G ++
Sbjct: 144 PNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY 201
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ VF+ L EK T +WT++I G G++ +L+LF + PD VLSACS
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+E G+++ H+ Y ++ + ID + G + A +L +P++
Sbjct: 262 LPFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++P VSLL A +L + IH + + + +D G+ALI +Y+ C++ S
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ +K KD W S+ G + +AL LF ++ +PD+ TF +++A +
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
V+ G++ FH ++ N +D+ + G +A +
Sbjct: 570 SVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S+ G+KPD + S+LT CA AL G +H Y + + D+ V +LI MYA+
Sbjct: 340 SMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCD 399
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICG---LAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
C+ + +VF+ D + ++I G L + ++AL +F M +P +TF++
Sbjct: 400 CLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVS 459
Query: 122 VLSACSHAGLVEEG-RKLFHSMSSTYHMKPNLEHYGG 157
+L A A L G K H + Y + NL+ + G
Sbjct: 460 LLRAS--ASLTSLGLSKQIHGLMFKYGL--NLDIFAG 492
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 132/248 (53%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P+ + S+L C+ LE G+ +H + ++ ++ +G+AL MY++ G +E
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF KD SW ++I GL+ NG+ ++ALELFE M G +PDDVTF+ ++SACSH
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G VE G F+ MS + P ++HY +DLL RAG L EA+E + D + L
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE--SANIDHGLC-L 594
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+R LLSAC+ +G ++G L + IY + R DV +V M+
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRA 654
Query: 250 LGIKKVPG 257
G+ K G
Sbjct: 655 NGVSKEVG 662
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KP ++ +V +L C+ LE G+ +H ++ + TAL+ MYA++GC+ +
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ F+ L+E+D A WTS+I G N +AL L+ M+T G P+D T +VL ACS
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 130 GLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+E G+++ H++ + ++ + + + G L + + R+ P++
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTPNK 487
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 16 FIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNG 75
++ ++L+ A + + GR IH +N ++ + AL+ MY++ + ++ ++F+
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Query: 76 LKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
++++ +W++++ G + NG++ +A++LF M + G KP + T + VL+ACS +EEG
Sbjct: 282 SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG 341
Query: 136 RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLS 195
++L HS + +L +D+ +AG L +A RK D E V L+ +L+S
Sbjct: 342 KQL-HSFLLKLGFERHLFATTALVDMYAKAGCLADA----RKGFDCLQERDVALWTSLIS 396
Query: 196 A 196
Sbjct: 397 G 397
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 34 GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 93
GR H V + D V T+L+ MY ++G VE L+VF + E++T +W++++ G A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 94 NGKTNKALELFEAM--ETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
G+ +A+++F E D F AVLS+ + V GR++
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 4/174 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+ P ++ LT +Q L GR +H + L+ YA+ G + K+
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKA---LELFEAMETLGAKPDDVTFIAVLSACS 127
+FN + KD SW S+I G + NG + + ++LF M P+ T + A S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
GR+ H++ ++ + + +AGL+ + ++ +P++
Sbjct: 130 SLQSSTVGRQA-HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 135/256 (52%), Gaps = 7/256 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNE----NRIMVDAVVGTALIKMYA 61
++ G++PD + ++L C + +L GR IH Y+ NR + + +L+ MY
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+ G + + VF+ ++ KD+ASW +I G + AL++F M G KPD++TF+
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVG 473
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+L ACSH+G + EGR M + Y++ P +HY ID+LGRA L EA EL P
Sbjct: 474 LLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPIC 533
Query: 182 TDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVN 241
+ ++ +R++LS+CR +GN D+ L ++ +Y A ++E+V
Sbjct: 534 DNPVV---WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVL 590
Query: 242 KVRSKMKDLGIKKVPG 257
VR M+ +KK PG
Sbjct: 591 DVRDAMRQQNVKKTPG 606
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV + + S+L+ SG +++GR IH + D VV ALI MY +S +E++
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F + E+D +W S++C G + L LFE M G +PD VT VL C
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 130 GLVEEGRKL 138
+ +GR++
Sbjct: 377 ASLRQGREI 385
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Query: 19 VSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSGCVEKSLEVFNGLK 77
++ L CAQ G+ IH ++ + D+ GT+L+ MYA+ G + +++ VF G
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-S 122
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
E+D + ++I G +NG A+E + M G PD TF ++L S A + + +K
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKK 181
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 196
+ H ++ + G + + + +A+++ +LPD+ D + L+ AL++
Sbjct: 182 V-HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV---LWNALVNG 236
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PDK+ SLL + + L + +H + D VG+ L+ Y++ VE +
Sbjct: 156 GILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDA 214
Query: 70 LEVFNGLKEKD-TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+VF+ L ++D + W +++ G + + AL +F M G T +VLSA +
Sbjct: 215 QKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTV 274
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+G ++ GR + H ++ ++ ID+ G++ L EA + + ++
Sbjct: 275 SGDIDNGRSI-HGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDER 326
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 135/250 (54%), Gaps = 5/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P+ SLLT + L+HG+ H +V + AV+ +LI MY++ G + +
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACSH 128
+F+ + E+ SW +++ G + +G + LELF M + KPD VT +AVLS CSH
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 129 AGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
+ + G +F M + Y KP EHYG +D+LGRAG + EA E ++++P + ++
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+LL ACR + ++D+GE + L ++ +YASA RW DVN VR+ M
Sbjct: 429 G---SLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 248 KDLGIKKVPG 257
+ K PG
Sbjct: 486 MQKAVTKEPG 495
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KP++F ++LT C ++ L G+ IH + + VG++L+ MYA++G ++++ E
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+F L E+D S T+II G A G +ALE+F + + G P+ VT+ ++L+A S L
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYG----GFIDLLGRAGLLHEAEELVRKLPDQT 182
++ G++ + + ++ L Y ID+ + G L A L +P++T
Sbjct: 270 LDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT 319
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
+LL C AL G+ +H ++ + R + + T L+ Y + C+E + +V + + EK
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
+ SWT++I + G +++AL +F M KP++ TF VL++C A + G+++
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI- 175
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
H + ++ ++ +D+ +AG + EA E+ LP++
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 137/251 (54%), Gaps = 5/251 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P+ + SL+ CA AL G+ +H + + + ALI MYA+ G + S
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 70 LEVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
VF + ++ SWTS++ G +G +A+ELF+ M + G +PD + F+AVLSAC H
Sbjct: 368 QRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRH 427
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AGLVE+G K F+ M S Y + P+ + Y +DLLGRAG + EA ELV ++P + DE
Sbjct: 428 AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDE---S 484
Query: 189 LYRALLSACRTYGNIDMGERLAT-TLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
+ A+L AC+ + + + RLA + +K IYA+ +W D +VR M
Sbjct: 485 TWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMM 544
Query: 248 KDLGIKKVPGI 258
+ +G KK G+
Sbjct: 545 RMMGNKKEAGM 555
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 34 GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 93
G+ IH V + + V +++ +Y + G + ++ F+ +++KD +W ++I L
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE- 290
Query: 94 NGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLE 153
+++AL +F+ E+ G P+ TF ++++AC++ + G++L H N+E
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL-HGRIFRRGFNKNVE 349
Query: 154 HYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
ID+ + G + +++ + ++ D+ +
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 138/252 (54%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G +P+ + SLL S L+ G+ IH + N + V T++I YA+ G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ + VF+ K++ +WT+II A++G ++ A LF+ M+ LG KPDDVT AVLSA
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+H+G + + +F SM + Y ++P +EHY + +L RAG L +A E + K+P +
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP---IDP 533
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
I ++ ALL+ G++++ L ++ +Y A RWE+ VR+
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 246 KMKDLGIKKVPG 257
KMK +G+KK+PG
Sbjct: 594 KMKRIGLKKIPG 605
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 36/224 (16%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KP+ V+S+ C QS L G +H + EN I +D + A+I YA+ G ++ +
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL--------------------- 110
+F+ + EKD+ ++ +II G +G +A+ LF ME++
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 111 ----------GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFID 160
G++P+ VT ++L + +++ ++ G+++ H+ + N+ ID
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI-HAFAIRNGADNNIYVTTSIID 409
Query: 161 LLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
+ G L A+ + D++ + + A+++A +G+ D
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRS----LIAWTAIITAYAVHGDSD 449
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 10 GVKPDKF---IVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCV 66
+PD V+ L+ C R +H +V D VG +I Y + +
Sbjct: 124 AARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNI 183
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLSA 125
E + +VF+ + E+D SW S+I G + +G ++++AM KP+ VT I+V A
Sbjct: 184 ESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA 243
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C + + G ++ M H++ +L I + G L A R L D+ E
Sbjct: 244 CGQSSDLIFGLEVHKKMIEN-HIQMDLSLCNAVIGFYAKCGSLDYA----RALFDEMSEK 298
Query: 186 IVPLYRALLSACRTYG 201
Y A++S +G
Sbjct: 299 DSVTYGAIISGYMAHG 314
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 139/244 (56%), Gaps = 8/244 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PDK + S+L A+ + +HGR +H +V + + V ALI +Y++ G + ++
Sbjct: 291 GIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQA 347
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + E+DT SW +II + K + L+ FE M AKPD +TF++VLS C++
Sbjct: 348 CFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANT 404
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G+VE+G +LF MS Y + P +EHY ++L GRAG++ EA ++ + + E +
Sbjct: 405 GMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI--VQEMGLEAGPTV 462
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL AC +GN D+GE A L ++ IY+ A R EDV +VR M D
Sbjct: 463 WGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Query: 250 LGIK 253
G++
Sbjct: 523 RGLE 526
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GVKPD+F +L C G+++ G IH + + D V AL+ MYA+ G + K+
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
VF+ + KD SW S++ G +G ++AL++F M G +PD V +VL+
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 17 IVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGL 76
I SLL C A++HG +H + + + + + L+++YA G E + EVF+ +
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 77 KEKDTA--SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEE 134
++D++ +W S+I G A G+ A+ L+ M G KPD TF VL AC G V+
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 135 GRKL 138
G +
Sbjct: 214 GEAI 217
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 134/240 (55%), Gaps = 3/240 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV P+ + +LL L G+ +H + ++ DA V TAL+ MY +SG ++ +
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+E+F G+K K ASW ++ G AM G+ + + F M G +PD +TF +VLS C ++
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV+EG K F M S Y + P +EH +DLLGR+G L EA + ++ + + D I
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATI--- 567
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ A LS+C+ + ++++ E L ++ +Y++ +RWEDV ++R+ M++
Sbjct: 568 WGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRN 627
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
+ G+KP + SLL A+ G L+ G+ IH Y+ N++ D V T LI MY ++G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 68 KSLEVFNGLKEKDTASWTSIICGL-----------------------------------A 92
+ VF+ + K+ +W S++ GL A
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 93 MNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNL 152
GK KAL++ M+ G P+ V++ A+ S CS G K+F M + PN
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNA 396
Query: 153 EHYGGFIDLLGRAGLLHEAEEL 174
+ +LG LLH +E+
Sbjct: 397 ATMSTLLKILGCLSLLHSGKEV 418
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G K +V LL C+ GR IH YV + + + +LI MY+++G +E S
Sbjct: 84 GAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELS 143
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VFN +K+++ +SW SI+ G + A+ L + ME G KPD VT+ ++LS +
Sbjct: 144 RKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASK 203
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
GL ++ + M +KP+ + + G L
Sbjct: 204 GLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 46 IMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKAL 101
I DA+ +L YA G EK+L+V +KEK A SWT+I G + NG AL
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 102 ELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDL 161
++F M+ G P+ T +L L+ G+++ H ++ + +D+
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV-HGFCLRKNLICDAYVATALVDM 440
Query: 162 LGRAGLLHEAEELVRKLPDQT 182
G++G L A E+ + +++
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKS 461
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D V +A + Y + + + ++F+ + ++D +W I+ +G KA+ELF M+
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
GAK D T + +L CS+ EGR++ H ++ N+ I + R G L
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQI-HGYVLRLGLESNVSMCNSLIVMYSRNGKL 140
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
EL RK+ + + + + ++LS+ G +D
Sbjct: 141 ----ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVD 172
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 3/231 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P+ +++LL C ++HG+ IH Y + V +AL+ MY + G + ++
Sbjct: 283 GLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEA 342
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ +F +K T ++ S+I A +G +KA+ELF+ ME G K D +TF A+L+ACSHA
Sbjct: 343 MILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHA 402
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL + G+ LF M + Y + P LEHY +DLLGRAG L EA E+++ + + D +
Sbjct: 403 GLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFV--- 459
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDV 240
+ ALL+ACR +GN+++ A L ++ +YA+A WE V
Sbjct: 460 WGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+K D FIV SLL E G+ IH V + DA + ++LI MY++ G V +
Sbjct: 112 GLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNA 171
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+VF+ L E+D + ++I G A N + ++AL L + M+ LG KPD +T+ A++S SH
Sbjct: 172 RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 52/222 (23%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
C ++ + D FIV SL+ ++ G + + R + + E D VV A+I YA +
Sbjct: 141 CLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANN 196
Query: 64 GCVEKSLEVFNGLK---------------------------------------EKDTASW 84
+++L + +K + D SW
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSW 256
Query: 85 TSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 144
TSII GL N + KA + F+ M T G P+ T I +L AC+ ++ G+++
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI-----H 311
Query: 145 TYHMKPNLEHYG----GFIDLLGRAGLLHEAEELVRKLPDQT 182
Y + LE +G +D+ G+ G + EA L RK P +T
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 132/252 (52%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I KP+ +++L++ C+ GA + IH Y N I + + L++ Y + G
Sbjct: 173 MIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGS 232
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ VF+ ++++D +W+S+I A++G AL+ F+ ME PDD+ F+ VL A
Sbjct: 233 IVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKA 292
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSHAGL +E F M Y ++ + +HY +D+L R G EA ++++ +P++
Sbjct: 293 CSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKP--- 349
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
+ ALL ACR YG I++ E A L V+ IY S R E+ ++R
Sbjct: 350 TAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRL 409
Query: 246 KMKDLGIKKVPG 257
KMK+ G+K PG
Sbjct: 410 KMKESGVKVSPG 421
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 98/193 (50%), Gaps = 11/193 (5%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
+ F+ +LL + ++ H R + D + + +AVV A+I Y G V++++E++
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQR----NAVVWNAMISHYTHCGKVKEAVELY 137
Query: 74 NGLK-EKDTASWTSIICGL-AMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+ + +S+ +II GL + +A+E + M KP+ +T +A++SACS G
Sbjct: 138 EAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
+++ HS + ++P+ + G ++ GR G + V+ + D ++ V +
Sbjct: 198 FRLIKEI-HSYAFRNLIEPHPQLKSGLVEAYGRCGSI----VYVQLVFDSMEDRDVVAWS 252
Query: 192 ALLSACRTYGNID 204
+L+SA +G+ +
Sbjct: 253 SLISAYALHGDAE 265
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 138/248 (55%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ + F S + +++ ++ G+ +H + + + V ALI MYA+ G + +
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ F + K+ SW +II + +G ++AL+ F+ M +P+ VT + VLSACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLV++G F SM+S Y + P EHY +D+L RAGLL A+E ++++P + D ++
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV--- 863
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+R LLSAC + N+++GE A L ++ +YA + +W+ + R KMK+
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 250 LGIKKVPG 257
G+KK PG
Sbjct: 924 KGVKKEPG 931
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 32/242 (13%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
C + V+G+ P + S+L+ C + +LE G +H V + D V AL+ +Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
G + + +F+ + ++D ++ ++I GL+ G KA+ELF+ M G +PD T ++
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA----------------- 165
+ ACS G + G++L H+ ++ N + G ++L +
Sbjct: 396 VVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 166 -----------GLLHEAEELVRKLPDQTDEIIVP---LYRALLSACRTYGNIDMGERLAT 211
GLL + R E IVP Y ++L C G++++GE++ +
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 212 TL 213
+
Sbjct: 515 QI 516
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+ P+++ S+L C + G LE G IH + + ++A V + LI MYA+ G ++ +
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++ KD SWT++I G +KAL F M G + D+V +SAC+
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
++EG+++ H+ + +L + L R G + E+ L + + D I +
Sbjct: 606 ALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEES-YLAFEQTEAGDNIA---W 660
Query: 191 RALLSACRTYGNIDMGERL 209
AL+S + GN + R+
Sbjct: 661 NALVSGFQQSGNNEEALRV 679
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 10 GVKPDKFIVVSLLTCC-AQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
V P++ +L C S A + IH + + VV LI +Y+++G V+
Sbjct: 181 NVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL 240
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ VF+GL+ KD +SW ++I GL+ N +A+ LF M LG P F +VLSAC
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 129 AGLVEEGRKL-----------------------FH--SMSSTYHMKPNLEH-----YGGF 158
+E G +L FH ++ S H+ N+ Y
Sbjct: 301 IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTL 360
Query: 159 IDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV 216
I+ L + G +A EL +++ E +L+ AC G + G++L T +
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D+ + + ++ CA AL+ G+ IH + D AL+ +Y++ G +E+S
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
F + D +W +++ G +G +AL +F M G ++ TF + + A S
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
+++G+++ H++ + E I + + G + +AE+
Sbjct: 706 ANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 1/169 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD + SL+ C+ G L G+ +H Y + + + AL+ +YA+ +E +
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L+ F + ++ W ++ + + +F M+ P+ T+ ++L C
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G +E G ++ HS + + N ID+ + G L A +++ +
Sbjct: 504 GDLELGEQI-HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 10 GVKPDKFIVVSLLTCCAQS-GALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++P+ + LL C ++ G+L+ GR +H + + + + + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +VF+ + E+ +W +I LA + LF M + P++ TF VL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 129 AG----LVEE--GRKLFHSM-SSTYHMKPNLEHY--GGFIDLLGR--------------- 164
+VE+ R L+ + ST P ++ Y GF+DL R
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 165 --AGLL-HEAE-ELVRKLPDQTDEIIVPL---YRALLSACRTYGNIDMGERL 209
+GL +E E E +R D I+P + ++LSAC+ ++++GE+L
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 129/245 (52%), Gaps = 3/245 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+ + +L+ CAQ GAL G+W+HD V V TALI MYA+ G + ++ +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ + +K+ +W ++I G ++G+ +AL +F M G P VTF+ VL ACSHAGLV
Sbjct: 478 FDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLV 537
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
+EG ++F+SM Y +P+++HY +D+LGRAG L A + + + + + +
Sbjct: 538 KEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV---WET 594
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LL ACR + + ++ ++ L + I+++ + VR K +
Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKL 654
Query: 253 KKVPG 257
K PG
Sbjct: 655 AKAPG 659
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
+L++ SG L IH Y ++ + A V TAL +Y++ +E + ++F+ EK
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
SW ++I G NG T A+ LF M+ P+ VT +LSAC+ G + G K
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWV 442
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
H + + + ++ I + + G + EA L
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D ++ +L A+ L G IH + V T I +Y++ G ++ +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
++ D ++ ++I G NG+T +L LF+ + GA+ T ++++ H L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY 339
Query: 134 EGRKLFHSMSSTYHMKPN-LEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
H Y +K N L H L L+E E RKL D++ E +P + A
Sbjct: 340 A----IHG----YCLKSNFLSHASVSTALTTVYSKLNEIES-ARKLFDESPEKSLPSWNA 390
Query: 193 LLS 195
++S
Sbjct: 391 MIS 393
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 129/252 (51%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G + ++ +V LL C +S L+ GR +H + + V+ TALI MY +
Sbjct: 241 MVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V + +F+ L ++ +W +I ++G+ LELFEAM +PD+VTF+ VL
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCG 360
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C+ AGLV +G+ + M + +KPN H +L AG EAEE ++ LPD+
Sbjct: 361 CARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTP 420
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
+ LLS+ R GN +GE +A +L IY+ RWEDVN+VR
Sbjct: 421 ESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVRE 480
Query: 246 KMKDLGIKKVPG 257
+K+ I ++PG
Sbjct: 481 MVKERKIGRIPG 492
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 41/177 (23%)
Query: 6 LIVIGVKPDKFIVVSLL-----TCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMY 60
++ G PD + VSL+ TCC SG + HG+ I ++ V +L+ MY
Sbjct: 109 ILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQV-----LPVQNSLMHMY 163
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET----------- 109
G ++ + ++F + ++D SW SII G+ NG A +LF+ M
Sbjct: 164 TCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMIS 223
Query: 110 --LGA------------------KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTY 146
LGA + ++ T + +L+AC + ++EGR + S+ T+
Sbjct: 224 AYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 137/246 (55%), Gaps = 3/246 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+ D F VVSLL C+ +GAL G+ IH V + I ++V TAL+ MY++ G +E +
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F+ + KD SW +I G +GK + ALE++ G +P+ V F+AVLS+CSH G+
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
V++G K+F SM + ++PN EH +DLL RA + +A + + + + +
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYK---ENFTRPSIDVLG 621
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
+L ACR G ++ + + + +K +A+ RW+DV++ ++M+ LG
Sbjct: 622 IILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLG 681
Query: 252 IKKVPG 257
+KK+PG
Sbjct: 682 LKKLPG 687
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
Query: 18 VVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
+ S++ CAQ G+ + G +H YV + +D +LI MYA+ G ++KSL +F +
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKP-DDVTFIAVLSACSHAGLVEEGR 136
E+D SW +II G A N KAL LFE M+ + D T +++L ACS AG + G
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG- 467
Query: 137 KLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
KL H + ++P +D+ + G L A+
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
S++ + PD F SLL CA L G IH V N D + ++L+ +YA+ G
Sbjct: 36 SMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFG 95
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + +VF ++E+D WT++I + G +A L M G KP VT + +LS
Sbjct: 96 LLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS 155
Query: 125 ACSHAGLVEEGR-KLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
G++E + + H + Y ++ ++L + + +A++L DQ +
Sbjct: 156 -----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLF----DQME 206
Query: 184 EIIVPLYRALLSACRTYGNI 203
+ + + ++S + GN+
Sbjct: 207 QRDMVSWNTMISGYASVGNM 226
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD+ + L+ LE GR +H + + VD + TALI MY + G E S
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
V + KD WT +I GL G+ KAL +F M G+ +V+++C+
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 130 GLVEEG 135
G + G
Sbjct: 360 GSFDLG 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 4 CSLI----VIGVKPDKFIVVSLLTCCAQSGALE--HGRWIHDYVNENRIMVDAVVGTALI 57
CSL+ G+KP ++ +L SG LE + +HD+ D V +++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSML 186
Query: 58 KMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDV 117
+Y + V + ++F+ ++++D SW ++I G A G ++ L+L M G +PD
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 118 TFIAVLSACSHAGLVEEGRKL 138
TF A LS +E GR L
Sbjct: 247 TFGASLSVSGTMCDLEMGRML 267
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 138/249 (55%), Gaps = 6/249 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNE--NRIMVDAVVGTALIKMYAQSGCVEK 68
VKPD+FI+V L++ C+Q G E + Y+++ N+ VV ALI M A+ G +++
Sbjct: 300 VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDR 358
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ ++F + ++D S+ S++ G+A++G ++A+ LFE M G PD+V F +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+ LVEEG + F M Y + + +HY ++LL R G L EA EL++ +P +
Sbjct: 419 SRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH---AS 475
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ +LL C +GN ++ E +A L ++ IYA+ DRW DV +R KM
Sbjct: 476 AWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMN 535
Query: 249 DLGIKKVPG 257
+ GI K+ G
Sbjct: 536 ENGITKICG 544
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D + T++I YA+ G + + ++F + D +W+++I G A NG+ N+A ++F M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN--LEHY--GGFIDLLGR 164
KPD+ + ++SACS G E L + S H + N HY ID+ +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFE----LCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 165 AGLLHEAEELVRKLPDQ 181
G + A +L ++P +
Sbjct: 353 CGHMDRAAKLFEEMPQR 369
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD++ ++ C+ +G + G +H V D VVGT+ + Y + + + +
Sbjct: 107 RPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARK 166
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSACSHA 129
VF + E++ SWT+++ +G+ +A +F+ M LG ++ A++ +
Sbjct: 167 VFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG------SWNALVDGLVKS 220
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRK 177
G + +KLF M K ++ Y ID + G + A +L +
Sbjct: 221 GDLVNAKKLFDEMP-----KRDIISYTSMIDGYAKGGDMVSARDLFEE 263
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 132/249 (53%), Gaps = 3/249 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ + D+ + S+++ CA +LE G + + D VV ++LI +Y + G VE
Sbjct: 444 LDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
VF+ + + D W S+I G A NG+ +A++LF+ M G +P +TF+ VL+AC++
Sbjct: 504 GRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNY 563
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GLVEEGRKLF SM + P+ EH+ +DLL RAG + EA LV ++P D
Sbjct: 564 CGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDG---S 620
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
++ ++L C G MG++ A + ++ I+A++ WE VR M+
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 249 DLGIKKVPG 257
+ + K PG
Sbjct: 681 ENNVTKNPG 689
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D ++ ++IK+Y G ++ + VF ++ K SW S+ G + NG T + LE F M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
L D+V+ +V+SAC+ +E G ++F + ++ + + IDL + G +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFV 501
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN----IDMGERLA 210
+ + ++DE VP + +++S T G ID+ ++++
Sbjct: 502 EHGRRVFDTMV-KSDE--VP-WNSMISGYATNGQGFEAIDLFKKMS 543
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 10/210 (4%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+++ GV+ D + SL+ A+ G L ++ + + E D +ALI YA G
Sbjct: 213 ILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP----DDHSLSALISGYANCGR 268
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V +S +F+ + W S+I G N +AL LF M + D T AV++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINA 327
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C G +E G+++ H + + + ++ +D+ + G EA +L ++ + D I
Sbjct: 328 CIGLGFLETGKQM-HCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV-ESYDTI 385
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTN 215
++ + +C G ID +R+ + N
Sbjct: 386 LLNSMIKVYFSC---GRIDDAKRVFERIEN 412
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 140/254 (55%), Gaps = 11/254 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIM-VDAVVGTALIKMYAQSGCVEK 68
+KP++ ++++L G L+ +H YV + + D V +LI YA+ GC++
Sbjct: 251 AIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQS 310
Query: 69 SLEVF----NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + F NG K+ SWT++I A++G +A+ +F+ ME LG KP+ VT I+VL+
Sbjct: 311 AFKFFIEIPNG--RKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLN 368
Query: 125 ACSHAGLVEEGR-KLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
ACSH GL EE + F++M + Y + P+++HYG +D+L R G L EAE++ ++P +
Sbjct: 369 ACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEK 428
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
++ +R LL AC Y + ++ ER+ L ++ I+ R+ D +
Sbjct: 429 AVV---WRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRF 485
Query: 244 RSKMKDLGIKKVPG 257
R +M G+ K+PG
Sbjct: 486 RKQMDVRGVAKLPG 499
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 128/241 (53%), Gaps = 3/241 (1%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
+ F S+ C+ G +H + ++ +ALI MY++ GC++ + EVF
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
+ D +WT+ I G A G ++AL LFE M + G KP+ VTFIAVL+ACSHAGLVE
Sbjct: 446 ESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRAL 193
+G+ +M Y++ P ++HY ID+ R+GLL EA + ++ +P + D + ++
Sbjct: 506 QGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMS---WKCF 562
Query: 194 LSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIK 253
LS C T+ N+++GE L + +Y A +WE+ ++ M + +K
Sbjct: 563 LSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 254 K 254
K
Sbjct: 623 K 623
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L+ GV+ D F+ +L CA L G+ IH V + + + VGT L+ Y +
Sbjct: 276 LVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKP-DDVTFIAVLS 124
E + F ++E + SW++II G + +A++ F+++ + A + T+ ++
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACS G ++ H+ + + + I + + G L +A E+ + D D
Sbjct: 396 ACSVLADCNIGGQV-HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM-DNPD- 452
Query: 185 IIVPLYRALLSACRTYGNIDMGERL 209
+ + A +S YGN RL
Sbjct: 453 --IVAWTAFISGHAYYGNASEALRL 475
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G KP + +LL AL+ GR IH +V + + + T ++ MY + G
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ + VF+ + K + T ++ G G+ AL+LF + T G + D F VL A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 126 CSHAGLVEEGRKL 138
C+ + G+++
Sbjct: 295 CASLEELNLGKQI 307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV + L C + +L HGR +HD + ++ +++MY + +E +
Sbjct: 78 GVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDA 137
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+ + E + S T++I A G +KA+ LF M G KP + +L + +
Sbjct: 138 DKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNP 197
Query: 130 GLVEEGRKL 138
++ GR++
Sbjct: 198 RALDFGRQI 206
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D F ++L C+ L HG+ IH + A VG AL+ +YA+ G ++++
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
F + KD SW +++ ++G ++AL+L++ M G KPD+VTFI +L+ CSH+
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ-TDEIIVP 188
GLVEEG +F SM Y + ++H ID+ GR G L EA++L TD
Sbjct: 452 GLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNS 511
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ LL AC T+ + ++G ++ L + +Y S RW++ VR +M
Sbjct: 512 SWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMV 571
Query: 249 DLGIKKVPG 257
+ G+KK PG
Sbjct: 572 ERGMKKTPG 580
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 113
T+ I A+SG + + +VF+G+ E DT +W +++ + G +A+ LF + AK
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 114 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
PDD +F A+LS C+ G V+ GRK+ S+ +L ID+ G+ A +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 174 LVRKL-PDQTDEI 185
+ R + D +E+
Sbjct: 127 VFRDMCCDSRNEV 139
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 91/234 (38%), Gaps = 45/234 (19%)
Query: 12 KPDKFIVVSLLTCC-AQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC----- 65
KPD + SL+ C A S + +GR +H + +N +++ Y + G
Sbjct: 201 KPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM 260
Query: 66 --------------------------VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNK 99
EK+LEVF+ EK+ +WT++I G NG +
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 100 ALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK----LFHSMSSTYHMKPNLEHY 155
AL F M G D + AVL ACS L+ G+ L H Y N
Sbjct: 321 ALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN---- 376
Query: 156 GGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
++L + G + EA+ R D ++ +V + +L A +G D +L
Sbjct: 377 -ALVNLYAKCGDIKEAD---RAFGDIANKDLVS-WNTMLFAFGVHGLADQALKL 425
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 33/149 (22%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ--------- 62
KPD + ++L+ CA G ++ GR I V + V +LI MY +
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 63 -------------SGC-----------VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTN 98
+ C E +L+VF + ++ +W +I G A GK
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 99 KALELFEAMETLGAKPDDVTFIAVLSACS 127
L LF+ M KPD TF ++++ACS
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACS 215
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 139/248 (56%), Gaps = 5/248 (2%)
Query: 13 PDKFIVVSLLTCCA--QSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
P+++ S+L A + +++ G+ H ++ + + VV +AL+ MYA+ G +++S
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VFN + +K+ WTSII + +G + LF M PD VTF++VL+AC+ G
Sbjct: 530 KVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
+V++G ++F+ M Y+++P+ EHY +D+LGRAG L EAEEL+ ++P E +
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGE---SML 646
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
+++L +CR +GN+ MG ++A +K IYA + W+ ++R M+
Sbjct: 647 QSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKK 706
Query: 251 GIKKVPGI 258
+ K G
Sbjct: 707 NVSKEAGF 714
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D F + L+ C S G + V + + D VVG + I MY++SG +
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTN-KALELFEAMETLGAKPDDVTFIAVLSACSH 128
VF+ + KD SW S++ GL+ G +A+ +F M G + D V+F +V++ C H
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Query: 129 AGLVEEGRKL 138
++ R++
Sbjct: 289 ETDLKLARQI 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV P++ V L+ + ++ G IH + + + VG + I +YA+ +E +
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 426
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF--EAMETLGAKPDDVTFIAVLSACS 127
+ F + ++ SW ++I G A NG +++AL++F A ET+ P++ TF +VL+A +
Sbjct: 427 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM---PNEYTFGSVLNAIA 483
Query: 128 HAG--LVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
A V++G++ H + + P + +D+ + G + E+E++ ++ Q ++
Sbjct: 484 FAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQ 540
Query: 185 IIVPLYRALLSACRTYGNID 204
+ + +++SA ++G+ +
Sbjct: 541 FV---WTSIISAYSSHGDFE 557
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+ D S++T C L+ R IH + VG L+ Y++ G +E
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + E++ SWT++I + + A+ +F M G P++VTF+ +++A
Sbjct: 331 KSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 130 GLVEEGRKL 138
++EG K+
Sbjct: 386 EQIKEGLKI 394
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 133/247 (53%), Gaps = 4/247 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV-DAVVGTALIKMYAQSGCVEKSLE 71
P+ V+SLL C+ S L +W H + + D VGT+++ YA+ G +E +
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F+ + EK+ SWT II A+NG +KAL LF+ M+ G P+ VT++A LSAC+H GL
Sbjct: 484 TFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGL 543
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
V++G +F SM H KP+L+HY +D+L RAG + A EL++ LP+ + +
Sbjct: 544 VKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDV-KAGASAWG 601
Query: 192 ALLSACRT-YGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
A+LS CR + + + + + ++ +A+ WEDV +R +K+
Sbjct: 602 AILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKER 661
Query: 251 GIKKVPG 257
++ V G
Sbjct: 662 KVRVVAG 668
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDY-VNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+PD V S+L C ++ GR +H + + + D V +LI MY++ V+ +
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
VF+ ++ SW SI+ G N + ++ALE+F M + D+VT +++L C
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V+ D+ VVSLL C + IH + + V ++LI Y V+ +
Sbjct: 323 AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDA 382
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
V + + KD S +++I GLA G++++A+ +F M P+ +T I++L+ACS +
Sbjct: 383 GTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVS 439
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYG-GFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
+ K H ++ + N G +D + G A E+ R+ DQ E +
Sbjct: 440 ADLRTS-KWAHGIAIRRSLAINDISVGTSIVDAYAKCG----AIEMARRTFDQITEKNII 494
Query: 189 LYRALLSA 196
+ ++SA
Sbjct: 495 SWTVIISA 502
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 147 bits (372), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 9/245 (3%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD + S+L A+S +L GR IH Y+ ++R + ++ +L+ MYA G +E + +
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
FN + KD SW SII A++G ++ LF M P+ TF ++L+ACS +G+V
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR- 191
+EG + F SM Y + P +EHYG +DL+GR G A+ + ++P VP R
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP------FVPTARI 602
Query: 192 --ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+LL+A R + +I + E A + ++ +YA A RWEDVN+++ M+
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 250 LGIKK 254
GI +
Sbjct: 663 KGISR 667
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV-DAVVGTALIKMYAQSGCVEK 68
G KPD+F +S L C+ + + G+ IH + +RI D +V T+++ MY++ G V
Sbjct: 226 GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACS 127
+ +FNG+ +++ +W +I A NG+ A F+ M E G +PD +T I +L A +
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ EGR + H + P++ ID+ G G L AE + ++ ++
Sbjct: 346 ----ILEGRTI-HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD ++LL + A+ GR IH Y + V+ TALI MY + G ++ +
Sbjct: 329 GLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSA 384
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + EK+ SW SII NGK ALELF+ + PD T ++L A + +
Sbjct: 385 EVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAES 444
Query: 130 GLVEEGRKL 138
+ EGR++
Sbjct: 445 LSLSEGREI 453
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ GVK D F ++ A +LE G+ IH V + + D V +LI +Y + GC
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ +VF + E+D SW S+I G G +L LF+ M G KPD + ++ L A
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 126 CSHAGLVEEGRKL 138
CSH + G+++
Sbjct: 241 CSHVYSPKMGKEI 253
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAK 113
T ++ +A S +E +L++F+ + + D W +I G G +A++ + M G K
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 114 PDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
D T+ V+ + + +EEG+K+ H+M ++ I L + G +AE+
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKI-HAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 174 LVRKLPDQ 181
+ ++P++
Sbjct: 187 VFEEMPER 194
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 131/239 (54%), Gaps = 3/239 (1%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
S L CA +++ G +H + V +LI MYA+ G ++ + VFN ++
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
D ASW ++I G + +G +AL + + M+ KP+ +TF+ VLS CS+AGL+++G++ F
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECF 573
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
SM + ++P LEHY + LLGR+G L +A +L+ +P + V ++RA+LSA
Sbjct: 574 ESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPS---VMIWRAMLSASMN 630
Query: 200 YGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGI 258
N + R A + + +YA A +W +V +R MK++G+KK PG+
Sbjct: 631 QNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGL 689
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P+ + + L GA + + +H + + ++D VG L+++Y Q G + +
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+VFN + + D W+ +I NG N+A++LF M P++ T ++L+ C+
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P++F + S+L CA G +H V + +D V ALI +YA+ ++ ++
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F L K+ SW ++I G G+ KA +F +VTF + L AC+
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
++ G ++ H ++ + + ID+ + G + A+ + ++ + I V +
Sbjct: 464 SMDLGVQV-HGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF----NEMETIDVASW 518
Query: 191 RALLSACRTYG 201
AL+S T+G
Sbjct: 519 NALISGYSTHG 529
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 36 WIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNG 95
W+H + + +A VG ALI Y+ G V+ + VF G+ KD W I+ NG
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENG 226
Query: 96 KTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSST-YHMKPNLEH 154
+L+L M G P++ TF L A G + + + + T Y + P +
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG- 285
Query: 155 YGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
G + L + G + +A ++ ++P +VP + C+
Sbjct: 286 -VGLLQLYTQLGDMSDAFKVFNEMPKND---VVPWSFMIARFCQN 326
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 137/258 (53%), Gaps = 9/258 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
M S++++ P + SLL+ C+ L++G+ IH +V + D V T+LI MY +
Sbjct: 359 MLSVVMV---PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 63 SGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
G + +F+ K KD W +I G +G+ A+E+FE + +P TF
Sbjct: 416 CGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFT 475
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
AVLSACSH G VE+G ++F M Y KP+ EH G IDLLGR+G L EA+E++ D
Sbjct: 476 AVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVI----D 531
Query: 181 QTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDV 240
Q E +Y +LL +CR + + +GE A L ++ IYA+ +RWEDV
Sbjct: 532 QMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDV 591
Query: 241 NKVRSKMKDLGIKKVPGI 258
+R + + K+PG+
Sbjct: 592 ESIRQVIDQKQLVKLPGL 609
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+P+ V+ +T CA L++GR +H V + + +VGTALI MY++ C + +
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 72 VFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF LK+ ++ SW S+I G+ +NG+ A+ELFE +++ G KPD T+ +++S S G
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 131 LVEEGRKLFHSMSSTYHMKPNLE 153
V E K F M S M P+L+
Sbjct: 348 KVIEAFKFFERMLSVV-MVPSLK 369
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 7 IVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCV 66
+++ P+KF LL CA+ G + GR +H V + VD TAL+ MY + V
Sbjct: 23 VILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQV 82
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+L+V + + E+ AS + + GL NG A +F G+ + VT +VL C
Sbjct: 83 TDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 127 SHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGG--FIDLLGRAGLLHEAEELVRKLPDQTD 183
G +E G +L +M S + M E Y G + + R G A + K+P ++
Sbjct: 143 ---GDIEGGMQLHCLAMKSGFEM----EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS- 194
Query: 184 EIIVPLYRALLSACRTYGNIDM 205
V Y A +S G +++
Sbjct: 195 ---VVTYNAFISGLMENGVMNL 213
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
V G + V S+L C G +E G +H ++ ++ VGT+L+ MY++ G
Sbjct: 125 VSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWV 181
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSAC 126
+ +F + K ++ + I GL NG N +F M + +P+DVTF+ ++AC
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Query: 127 SHAGLVEEGRKL 138
+ ++ GR+L
Sbjct: 242 ASLLNLQYGRQL 253
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 132/236 (55%), Gaps = 2/236 (0%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD ++VS+L C+ +E G+ IH + I++D + TA + MY++ G VE + +
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+ E+DT + ++I G A +G K+ + FE M G KPD++TF+A+LSAC H GLV
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLV 510
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
EG K F SM Y++ P HY IDL G+A L +A EL+ + DQ ++ V L A
Sbjct: 511 LEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI-DQVEKDAVIL-GA 568
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
L+AC N ++ + + L ++ YAS+ RW+++ ++R +M+
Sbjct: 569 FLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMR 624
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRI-MVDAVVGTALIKMYAQSG 64
L+ G KF V SL+ ++ G + + + N + + VD+V A+I Y + G
Sbjct: 151 LVKTGNDGTKFAVSSLIHMYSKCGKFKE---VCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 65 CVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
++K+L VF E DT SW ++I G A NG +AL++ +ME G K D+ +F AVL
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 124 SACSHAGLVEEGRKL 138
+ S ++ G+++
Sbjct: 268 NVLSSLKSLKIGKEV 282
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 53 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL---FEAMET 109
+++I Y+ G + ++ +F+ L EK+ WT++ G + + LEL F A ET
Sbjct: 329 ASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANET 388
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
PD + ++VL ACS +E G+++ HS+ + M L F+D+ + G +
Sbjct: 389 --NTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL--VTAFVDMYSKCGNV 444
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 202
AE ++ D + E +Y A+++ C +G+
Sbjct: 445 EYAE----RIFDSSFERDTVMYNAMIAGCAHHGH 474
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 136/252 (53%), Gaps = 3/252 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G+ D ++ +L+ A AL GR IH Y+ ++ + A++ MYA G
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGD 637
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ + VF+ ++ K +TS+I M+G A+ELF+ M PD ++F+A+L A
Sbjct: 638 LQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYA 697
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSHAGL++EGR M Y ++P EHY +D+LGRA + EA E V+ + E
Sbjct: 698 CSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM---KTEP 754
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRS 245
++ ALL+ACR++ ++GE A L ++ ++A RW DV KVR+
Sbjct: 755 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 814
Query: 246 KMKDLGIKKVPG 257
KMK G++K PG
Sbjct: 815 KMKASGMEKHPG 826
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK 79
+LL CA+ + G +H + + + AL+ MYA++ + + +F+G +EK
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 80 -DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
D W SI+ + +GK+ + LELF M G P+ T ++ L+AC + G+++
Sbjct: 247 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 306
Query: 139 FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
S+ + L I + R G + +AE ++R++
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSGCV 66
+ G P+ + +VS LT C + G+ IH V ++ + V ALI MY + G +
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
++ + + D +W S+I G N +ALE F M G K D+V+ ++++A
Sbjct: 337 PQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS 396
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGL 167
+ G +L H+ + NL+ ID+ + L
Sbjct: 397 GRLSNLLAGMEL-HAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 47 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 106
++D V+ L+ +Y + + + VF +K KD SWTS+I A+NG ++A+ELF
Sbjct: 518 LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 107 METLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
M G D V + +LSA + + +GR++
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREI 609
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G K D+ + S++ + L G +H YV ++ + VG LI MY++
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
F + +KD SWT++I G A N +ALELF + + D++ ++L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 126 CS 127
S
Sbjct: 497 SS 498
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNEN--RIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE 78
+L C + A+ GR +H + + +D + G L+ MY + G ++ + +VF+ + +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFDEMPD 144
Query: 79 KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
+ +W ++I NG+ AL L+ M G +F A+L AC+ + G +L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 139 FHSM--SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 196
HS+ YH + + + + L A L ++ D + L+ ++LS+
Sbjct: 205 -HSLLVKLGYHSTGFI--VNALVSMYAKNDDLSAARRLFDGFQEKGDAV---LWNSILSS 258
Query: 197 CRTYG 201
T G
Sbjct: 259 YSTSG 263
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 136/249 (54%), Gaps = 5/249 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G KPD + SLL+ L G +H V + ++ D V ALI MY++ G + +S
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMES 462
Query: 70 LEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+F+ +K +++ +W ++I G A +G ++AL LF +M++ G P +TF++VL+AC+H
Sbjct: 463 RRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AGLV+E + F SM S Y ++P +EHY +++ G EA ++ +P + D+ +
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTV-- 580
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ ALL ACR Y N+ + A ++ ++ +YA W++ ++VR M+
Sbjct: 581 -WGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 249 DLGIKKVPG 257
IKK G
Sbjct: 640 SKRIKKERG 648
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
DA ++ YA G VE + F EK T SW SII N +A++LF M
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G KPD T ++LSA + + G ++ + T + P++ + I + R G +
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIPDVPVHNALITMYSRCGEI 459
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGN 202
E+ + ++ + + I + A++ +GN
Sbjct: 460 MESRRIFDEMKLKREVIT---WNAMIGGYAFHGN 490
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+SG + ++ ++F L+ ++T +W ++I G + N+A +LF+ M K D VT+
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNT 107
Query: 122 VLS---ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
++S +C +EE RKLF M S N I + + EA L K+
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNT-----MISGYAKNRRIGEALLLFEKM 162
Query: 179 PDQT 182
P++
Sbjct: 163 PERN 166
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 135/250 (54%), Gaps = 4/250 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G KPD +V +L CA+ G+ +H YV + +D V +ALI MY++ G ++ +
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCA 362
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ +F G+ EK+ S+ S+I GL ++G + A E F + +G PD++TF A+L C H+
Sbjct: 363 MSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHS 422
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL+ +G+++F M S + ++P EHY + L+G AG L EA E V L D I+
Sbjct: 423 GLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILG- 481
Query: 190 YRALLSACRTYGNIDMGERLATTL-TNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
ALLS C + N + E +A + N + +YA RW++V ++R +
Sbjct: 482 --ALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGIS 539
Query: 249 DLGIKKVPGI 258
+ K+PGI
Sbjct: 540 ESYGGKLPGI 549
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P+ + +V+L + L +H + + + + VG AL+ MY++ C+ +
Sbjct: 202 GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VFN + E D + +S+I G + G +AL LF + G KPD V VL +C+
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAEL 321
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
G+++ HS ++ +++ ID+ + GLL A L +P++
Sbjct: 322 SDSVSGKEV-HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD F L ++S + R IH + + D + G+A++K Y+++G + ++ +
Sbjct: 103 RPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASK 162
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+F + + D A W +I G G +K + LF M+ G +P+ T +A+ S GL
Sbjct: 163 LFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GL 217
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHY 155
++ L + +K NL+ +
Sbjct: 218 IDPSLLLVAWSVHAFCLKINLDSH 241
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 137/250 (54%), Gaps = 5/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ + ++++++ C S L +H + + M ++G ALI MYA+ G + +
Sbjct: 348 GIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAA 407
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
EVF L EKD SW+S+I ++G ++ALE+F+ M G + DD+ F+A+LSAC+HA
Sbjct: 408 REVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHA 467
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GLVEE + +F + + YHM LEHY +I+LLGR G + +A E+ +P + I
Sbjct: 468 GLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARI--- 523
Query: 190 YRALLSACRTYGNIDM-GERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ +LLSAC T+G +D+ G+ +A L + I+ + + +VR M+
Sbjct: 524 WSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQ 583
Query: 249 DLGIKKVPGI 258
+ K G
Sbjct: 584 RRKLNKCYGF 593
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEH-GRWIHDYV-NENRIMVDAVVGTALIKMYAQSGCVE 67
G P +V SLL C + G+ R H V + R+ ++ TAL+ MY +
Sbjct: 143 GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHA 202
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+ VF+ ++ K+ SWT++I G N ++LF AM+ +P+ VT ++VL AC
Sbjct: 203 AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACV 262
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 166
K H S + + F+ + R G
Sbjct: 263 ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHG----RWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++P++ ++S+L C + L +G + IH + + D + A + MY + G
Sbjct: 246 NLRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGN 302
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V S +F K +D W+S+I G A G ++ + L M G + + VT +A++SA
Sbjct: 303 VSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSA 362
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMK----PNLEHY---GGFIDLLGRAGLLHEAEELVRKL 178
C+++ L+ S +ST H + + H ID+ + G L A E+ +L
Sbjct: 363 CTNSTLL--------SFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL 414
Query: 179 PDQ 181
++
Sbjct: 415 TEK 417
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D VV +LI MYA+ +VF+ + +DT S+ SII +G +A++L + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 142
G P ++L+ C+ G + ++FH++
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 133/251 (52%), Gaps = 5/251 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVV-GTALIKMYAQSG 64
+++ G P+ + S+L A+ G L+HG+ H Y+ + D ++ +L+ MYA+SG
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + VF+ ++++D ++TS+I G GK AL F+ M+ G KPD VT +AVLS
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH+ LV EG LF M + ++ LEHY +DL RAG L +A ++ +P +
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSS 593
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATT-LTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
+ LL AC +GN ++GE A L K +YA W + V
Sbjct: 594 AMCA---TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
Query: 244 RSKMKDLGIKK 254
++ + DLG++K
Sbjct: 651 KTLLSDLGVQK 661
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D+F S++ CA +GR +H + + + V ALI MY + G V+ +
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + E+D SW +II K +A +L + M G + VT+ + C A
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 130 G 130
G
Sbjct: 299 G 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 9/188 (4%)
Query: 22 LTCCAQSGALEHGRWIHDYVNENRIMVDAV--VGTALIKMYAQSGCVEKSLEVFNGLKEK 79
L C+ GAL+ G+ H V + + V +LI MY++ + + VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
++W SII G A N ++ + L + M G P+ +T ++L + G ++ G++
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
+ K L + +D+ ++G + A+ + + + D++ Y +L+
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVT---YTSLIDG--- 499
Query: 200 YGNIDMGE 207
YG + GE
Sbjct: 500 YGRLGKGE 507
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 133/251 (52%), Gaps = 5/251 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVV-GTALIKMYAQSG 64
+++ G P+ + S+L A+ G L+HG+ H Y+ + D ++ +L+ MYA+SG
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + VF+ ++++D ++TS+I G GK AL F+ M+ G KPD VT +AVLS
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
ACSH+ LV EG LF M + ++ LEHY +DL RAG L +A ++ +P +
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSS 593
Query: 185 IIVPLYRALLSACRTYGNIDMGERLATT-LTNVKXXXXXXXXXXXXIYASADRWEDVNKV 243
+ LL AC +GN ++GE A L K +YA W + V
Sbjct: 594 AMCA---TLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
Query: 244 RSKMKDLGIKK 254
++ + DLG++K
Sbjct: 651 KTLLSDLGVQK 661
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D+F S++ CA +GR +H + + + V ALI MY + G V+ +
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ + E+D SW +II K +A +L + M G + VT+ + C A
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 130 G 130
G
Sbjct: 299 G 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 9/188 (4%)
Query: 22 LTCCAQSGALEHGRWIHDYVNENRIMVDAV--VGTALIKMYAQSGCVEKSLEVFNGLKEK 79
L C+ GAL+ G+ H V + + V +LI MY++ + + VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
++W SII G A N ++ + L + M G P+ +T ++L + G ++ G++
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
+ K L + +D+ ++G + A+ + + + D++ Y +L+
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM-RKRDKVT---YTSLIDG--- 499
Query: 200 YGNIDMGE 207
YG + GE
Sbjct: 500 YGRLGKGE 507
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 135/247 (54%), Gaps = 3/247 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P+ + S+L+ A L G IH V + I+ D V +L+ MY + G +
Sbjct: 434 VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
++F+ + E + S+ ++I G + NG KAL+LF +E+ G +P+ VTF+A+LSAC H G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
V+ G K F SM S+Y+++P +HY +DLLGR+GLL +A L+ +P + ++
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHS---GVW 610
Query: 191 RALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
+LLSA +T+ +D+ E A L ++ +Y+ + D +++ + K
Sbjct: 611 GSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSK 670
Query: 251 GIKKVPG 257
IKK PG
Sbjct: 671 RIKKDPG 677
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VK + + + C G IH V+ + D +G +L+ MY++ G + ++
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM----------------------- 107
VF +K KD+ SW S+I GL + ++A ELFE M
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISK 390
Query: 108 --ETLGAKP--DDVTFIAVLSACSHAGLVEEGRKLFHSM 142
E G P D++T+ A++SA G EE FH M
Sbjct: 391 CVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D V T +IK ++ G + K +E+F + EKD +WT++I NG +AL F M
Sbjct: 371 DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKML 430
Query: 109 TLGAKPDDVTFIAVLSA-CSHAGLVE----EGR----------KLFHSMSSTYHM----- 148
P+ TF +VLSA S A L+E GR + +S+ S Y
Sbjct: 431 QKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTN 490
Query: 149 ----------KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACR 198
+PN+ Y I G +A +L L E + ALLSAC
Sbjct: 491 DAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACV 550
Query: 199 TYGNIDMG 206
G +D+G
Sbjct: 551 HVGYVDLG 558
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 129/249 (51%), Gaps = 7/249 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+ PD + S+L CA H IH V + + D V+ +LI YA+ G ++ +
Sbjct: 365 LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCM 424
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VF+ + +D SW S++ +++G+ + L +F+ M+ PD TFIA+LSACSHAG
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDI---NPDSATFIALLSACSHAG 481
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
VEEG ++F SM P L HY ID+L RA EAEE+++++P D ++ +
Sbjct: 482 RVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVV---W 538
Query: 191 RALLSACRTYGNIDMGERLATTLTN-VKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
ALL +CR +GN +G+ A L V+ IY + + + N +M+
Sbjct: 539 IALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMET 598
Query: 250 LGIKKVPGI 258
++K P +
Sbjct: 599 WRVRKEPDL 607
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMV--DAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
+L CA+ L G +H ++ + + ++ LI MYA+ G + + +VF+ +
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
E++ SWT++I G G + LF +M + P++ T +VL++C +
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPNEFTLSSVLTSCRY 173
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 143 bits (361), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 13/248 (5%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV----DAVVGTALIKMYAQSGCVEKS 69
++ ++++ C+ G+LE G+W+H +++++ D TALI MYA+ G + +
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVH-----HKLIISGLKDLFTDTALIDMYAKCGDLNAA 558
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF + + SW+S+I M+G+ A+ F M G KP++V F+ VLSAC H+
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G VEEG+ F+ M S + + PN EH+ FIDLL R+G L EA ++++P D +
Sbjct: 619 GSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLAD---ASV 674
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ +L++ CR + +D+ + + L+++ IYA WE+ ++RS MK
Sbjct: 675 WGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKS 734
Query: 250 LGIKKVPG 257
+KKVPG
Sbjct: 735 SNLKKVPG 742
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
+KPD F + S ++ C +G + G+ IH +V + D V +LI MY++SG V+ +
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSAS 459
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
VFN +K + +W S++CG + NG + +A+ LF+ M + ++VTF+AV+ ACS G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+E+G+ + H + +L ID+ + G L+ AE + R +
Sbjct: 520 SLEKGKWVHHKL--IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAM 565
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+PD ++S++ CA+ G L R +H + +D + +L+ MY++ G + S
Sbjct: 197 GVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSS 256
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F + +K+ SWT++I + KAL F M G +P+ VT +VLS+C
Sbjct: 257 ERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLI 316
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYG-GFIDLLGRAGLLHEAEELVRKLPDQT 182
GL+ EG+ + H + + PN E ++L G L + E ++R + D+
Sbjct: 317 GLIREGKSV-HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 15 KFIVVSLLTCCAQS------GALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
KF+ S+L CA S G HGR I V++ DAV+ T+L+ MY Q+G +
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD-----DAVIETSLLCMYGQTGNLSD 154
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +VF+G+ +D +W++++ NG+ KAL +F+ M G +PD VT I+V+ C+
Sbjct: 155 AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 129 AGLVEEGRKL 138
G + R +
Sbjct: 215 LGCLRIARSV 224
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVD-AVVGTALIKMYAQSG 64
+I G++P+ + S+L+ C G + G+ +H + + + + AL+++YA+ G
Sbjct: 294 MIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG 353
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ V + +++ +W S+I A G +AL LF M T KPD T + +S
Sbjct: 354 KLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSIS 413
Query: 125 ACSHAGLVEEGRKL 138
AC +AGLV G+++
Sbjct: 414 ACENAGLVPLGKQI 427
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 4/247 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+ D + ++L CA A+ G+ IH + +V +ALI +Y +SGC++ +
Sbjct: 359 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
V++ + ++ +W +++ LA NG+ +A+ F M G KPD ++FIA+L+AC H G+
Sbjct: 419 VYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGM 478
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
V+EGR F M+ +Y +KP EHY IDLLGRAGL EAE L+ + + D L+
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRND---ASLWG 535
Query: 192 ALLSACRTYGNID-MGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDL 250
LL C + + ER+A + ++ +Y + R D +R M
Sbjct: 536 VLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRR 595
Query: 251 GIKKVPG 257
G+ K G
Sbjct: 596 GVAKTVG 602
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD ++LT C L+ G+ IH + N I + VV ++L+ MY + G V ++
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VFNG+ +K++ SW++++ G NG+ KA+E+F ME + D F VL AC+
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGL 375
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
V G+++ H N+ IDL G++G + A + K+ + +
Sbjct: 376 AAVRLGKEI-HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRN----MIT 430
Query: 190 YRALLSA 196
+ A+LSA
Sbjct: 431 WNAMLSA 437
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 17 IVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG-CVEKSLEVFNG 75
+ SLL C + + HG H +V ++ + D VG +L+ +Y + G + ++ VF+G
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 76 LKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
KD SWTS++ G + KALE+F M + G ++ T + + ACS G V G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 136 RKLFHSMSSTYHMKPN 151
R FH + T+ + N
Sbjct: 183 R-CFHGVVITHGFEWN 197
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 2/179 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G+ ++F + S + C++ G + GR H V + + + + L +Y +
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNRE 213
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMET-LGAKPDDVTFIAVLS 124
+ VF+ + E D WT+++ + N +AL LF AM G PD TF VL+
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
AC + +++G+++ H T + N+ +D+ G+ G + EA ++ + +
Sbjct: 274 ACGNLRRLKQGKEI-HGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 135/251 (53%), Gaps = 12/251 (4%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
K ++ +VS++ CA GAL G+ +H Y+ + + + ++ T+LI MYA+ G + +
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 72 VF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF +KE D W +II GLA +G ++L+LF M PD++TF+ +L+ACSH
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHG 357
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP- 188
GLV+E F S+ + +P EHY +D+L RAGL+ +A + + ++P I P
Sbjct: 358 GLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP------IKPT 410
Query: 189 --LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSK 246
+ ALL+ C +GN+++ E + L ++ +YA ++ +R
Sbjct: 411 GSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREA 470
Query: 247 MKDLGIKKVPG 257
M+ G+KK+ G
Sbjct: 471 MEKKGVKKIAG 481
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 4 CSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
CS++ G++ D FI +L+ R + D + + V +++ YA+S
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNL----VTWNSILDAYAKS 187
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAV 122
G V + VF+ + E+D +W+S+I G G+ NKALE+F+ M +G +K ++VT ++V
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV-RKLPDQ 181
+ AC+H G + G K H H+ + ID+ + G + +A + R +
Sbjct: 248 ICACAHLGALNRG-KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 182 TDEIIVPLYRALLSACRTYGNI 203
TD + ++ A++ ++G I
Sbjct: 307 TDAL---MWNAIIGGLASHGFI 325
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 136/246 (55%), Gaps = 6/246 (2%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
+ + S+++ CA S LE GR IH ++ + VG++L+ +Y++ G E + +VF
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
N + K+ W +++ A + T K +ELF+ M+ G KP+ +TF+ VL+ACSHAGLV+
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP-DQTDEIIVPLYRA 192
EGR F M + ++P +HY +D+LGRAG L EA E++ +P D T+ + + A
Sbjct: 336 EGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV----WGA 390
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
LL++C + N ++ A + + YA+ R+ED K R ++D G
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGE 450
Query: 253 KKVPGI 258
KK G+
Sbjct: 451 KKETGL 456
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
++PD ++ S CA + GR +H + D VG++L+ MYA+ G + +
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++F+ + +++ +W+ ++ G A G+ +AL LF+ +D +F +V+S C+++
Sbjct: 171 RKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
L+E GR++ H +S + + L + G+ A ++ ++P + I +
Sbjct: 231 TLLELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM 289
Query: 190 YRALLSACRTYGNIDMGERL 209
+A T I++ +R+
Sbjct: 290 LKAYAQHSHTQKVIELFKRM 309
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRI-MVDAVVGTALIKMYAQSGCVEKS 69
++PDK+ VS+L+ C++ L G IH + + D V LI MY + G +
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
++VF +EK+ +WT++I L ++G +ALE F+ +LG KPD V+FI++L+AC H
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G+V+EG LF M Y ++P ++HY +DLL R G L EAE L+R++P D P+
Sbjct: 661 GMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPAD---APV 716
Query: 190 YRALLSACRTYG 201
+R L C +
Sbjct: 717 WRTFLDGCNRFA 728
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P++ VS+L + L GR IH + +N V+G ALI YA+ G +E S
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
F+ +++K+ W +++ G A N L LF M +G +P + TF L +C
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 8/174 (4%)
Query: 31 LEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICG 90
L+ + +H + + + V +LI Y + G + +F D SW +IIC
Sbjct: 231 LDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICA 290
Query: 91 LAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKP 150
A + KAL+LF +M G P+ T+++VL S L+ GR++ H M +
Sbjct: 291 TAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCET 349
Query: 151 NLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
+ ID + G L ++ + D+ + + ALLS Y N D
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN----IVCWNALLSG---YANKD 396
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 32/224 (14%)
Query: 6 LIVIGVKPDKFIV-VSLLTCCA------QSGALEHGRWIHDYV--------NENRIMVDA 50
++ +G +P ++ +L +CC S + G +DYV +N++M DA
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDA 466
Query: 51 VV-------GTALIKM------YAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT 97
++ T+++ + Y++ G +S+++ + L++ DT SW I + +
Sbjct: 467 LLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYH 526
Query: 98 NKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGG 157
+ +ELF+ M +PD TF+++LS CS + G + ++ T +
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNV 586
Query: 158 FIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYG 201
ID+ G+ G + V K+ ++T E + + AL+S +G
Sbjct: 587 LIDMYGKCGSIRS----VMKVFEETREKNLITWTALISCLGIHG 626
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 9 IGVKPDKFIVVSLLTCCA---QSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
G P++ V LL+C + ++G HG + M DA VGT L+ +Y +
Sbjct: 109 FGYLPNQSTVSGLLSCASLDVRAGTQLHGL----SLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+E + +VF + K +W ++ L G + + F + +GA + +F+ VL
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 176
S ++ ++L H ++ + + I G+ G H AE + +
Sbjct: 225 VSCVKDLDISKQL-HCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ 274
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 130/250 (52%), Gaps = 4/250 (1%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+P+ ++ S L C+ + L G+ IH N + D+ + L+ MY + G + ++
Sbjct: 278 RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQART 337
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSACSHA 129
+F + K SWTS+I A+NG KALE+F M E G P+ VTF+ V+SAC+HA
Sbjct: 338 IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHA 397
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV-RKLPDQTDEIIVP 188
GLV+EG++ F M Y + P EHY FID+L +AG E LV R + + I
Sbjct: 398 GLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCA 457
Query: 189 LYRALLSACRTYGNIDMGERLATTLT-NVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
++ A+LSAC ++ GE +A L YA+ +W+ V ++R K+
Sbjct: 458 IWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKL 517
Query: 248 KDLGIKKVPG 257
K+ G+ K G
Sbjct: 518 KNKGLVKTAG 527
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
+L C+ E GR +H + + + TALI MY++ G + S+ VF ++EKD
Sbjct: 90 VLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKD 149
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 140
SW +++ G NGK +AL +F AM + + T +V+ C+ ++++G+++ H
Sbjct: 150 LVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQV-H 208
Query: 141 SMSSTYHMKPNLEHYG-GFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 197
+M +L G I GL++EA ++ L TDE+++ +L+S C
Sbjct: 209 AMVVV--TGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML---NSLISGC 261
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 131/245 (53%), Gaps = 3/245 (1%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D F + S++ A L G+ + + ++ V +++ MY + G V+++ + F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
++ KD SWT +I G +G K++ +F M +PD+V ++AVLSACSH+G+++
Sbjct: 372 AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRAL 193
EG +LF + T+ +KP +EHY +DLLGRAG L EA+ L+ +P + + V +++ L
Sbjct: 432 EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN---VGIWQTL 488
Query: 194 LSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIK 253
LS CR +G+I++G+ + L + +Y A W + R G+K
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 254 KVPGI 258
K G+
Sbjct: 549 KEAGM 553
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ P++F + L C ALE G IH + + + VG +L+ MY++ G + ++
Sbjct: 102 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 161
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME--TLGAKPDDVTFIAVLSACS 127
+VF + ++ SW ++I G G +KAL+ F M+ + +PD+ T ++L ACS
Sbjct: 162 EKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 221
Query: 128 HAGLVEEGRKLFHSM-SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
G++ G+++ + S +H + G +DL + G L A RK DQ E
Sbjct: 222 STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA----RKAFDQIKEKT 277
Query: 187 VPLYRALL 194
+ + +L+
Sbjct: 278 MISWSSLI 285
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 18 VVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
+VS+L C + G + G +H Y+ ++ ++ + LI MY + + +VF+ +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
E++ SW++++ G +NG +L LF M G P++ TF L AC +E+G +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
+ H + +E +D+ + G ++EAE++ R++ D++
Sbjct: 129 I-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRS 172
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 38/248 (15%)
Query: 1 MGMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMV--DAVVGTALIK 58
GM I +PD+F + SLL C+ +G + G+ IH ++ + A + +L+
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 59 MYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVT 118
+Y + G + + + F+ +KEK SW+S+I G A G+ +A+ LF+ ++ L ++ D
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 119 FIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH--YGGFIDLLGRAGLLHEAEEL-- 174
+++ + L+ +G+++ + + LE +D+ + GL+ EAE+
Sbjct: 316 LSSIIGVFADFALLRQGKQM---QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 175 --------------------------VRKLPDQTDEIIVP---LYRALLSACRTYGNIDM 205
VR + I P Y A+LSAC G I
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 206 GERLATTL 213
GE L + L
Sbjct: 433 GEELFSKL 440
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
GV D+F L+ A+ LE G+ +H + D+ + A MY++ G + +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+++ + SW +I L +G + F M +G KP VTF+++L+ACSH
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 678
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GLV++G + ++ + ++P +EH IDLLGR+G L EAE + K+P + ++++
Sbjct: 679 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-- 736
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+R+LL++C+ +GN+D G + A L+ ++ ++A+ RWEDV VR +M
Sbjct: 737 -WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 795
Query: 249 DLGIKK 254
IKK
Sbjct: 796 FKNIKK 801
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSG-ALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
++ V GV + VVS+L+ C G LE G+ +H Y+ D V +LI MYA+
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 512
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
G + S ++FNGL ++ +W +++ A +G + L+L M + G D +F L
Sbjct: 513 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGL 572
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEH----YGGFIDLLGRAGLLHEAEELVRKLP 179
SA + ++EEG++L H ++ +K EH + D+ + G E E+V+ LP
Sbjct: 573 SAAAKLAVLEEGQQL-HGLA----VKLGFEHDSFIFNAAADMYSKCG---EIGEVVKMLP 624
Query: 180 DQTDEIIVPLYRALLSACRTYGNID 204
+ + P + L+SA +G +
Sbjct: 625 PSVNRSL-PSWNILISALGRHGYFE 648
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGAL-EHGRWIHDYVNENRIMVDAVVGTALIKMYA 61
MC L G+KP F++ SL+T C +SG++ G +H +V ++ ++ D V TA++ +Y
Sbjct: 49 MCDL---GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG 105
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
G V S +VF + +++ SWTS++ G + G+ + +++++ M G ++ +
Sbjct: 106 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 165
Query: 122 VLSACSHAGLVEE---GRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
V+S+C GL+++ GR++ + + ++ L I +LG G + A +
Sbjct: 166 VISSC---GLLKDESLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIF--- 218
Query: 179 PDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 213
DQ E + ++ +A G+I+ R+ + +
Sbjct: 219 -DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
+CS+I G + S L C E GR +H V + + + ++G AL+ MY +
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 409
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
G + +S V + +D +W ++I G A + +KAL F+ M G + +T ++V
Sbjct: 410 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 123 LSACSHAG-LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
LSAC G L+E G+ L H+ + + + I + + G L +++L L ++
Sbjct: 470 LSACLLPGDLLERGKPL-HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 182 TDEIIVPLYRALLSACRTYGN 202
+ + A+L+A +G+
Sbjct: 529 N----IITWNAMLAANAHHGH 545
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 29 GALEHGRW---IHDYVNENRIMVDAVVGTALIKMYAQSG-CVEKSLEVFNGLKEKDTASW 84
G ++H +W IH V + V L++MYA +G VE +L VF + KD SW
Sbjct: 272 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL-VFKQMPTKDLISW 330
Query: 85 TSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 144
S++ +G++ AL L +M + G + VTF + L+AC E+GR + H +
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVV 389
Query: 145 TYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
+ N + + G+ G + E+ ++ ++P
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%)
Query: 34 GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 93
GR I V ++ + V +LI M G V+ + +F+ + E+DT SW SI A
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 94 NGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
NG ++ +F M + + T +LS H + GR +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 283
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 3/246 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
GV D+F L+ A+ LE G+ +H + D+ + A MY++ G + +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+++ + SW +I L +G + F M +G KP VTF+++L+ACSH
Sbjct: 602 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 661
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
GLV++G + ++ + ++P +EH IDLLGR+G L EAE + K+P + ++++
Sbjct: 662 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV-- 719
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+R+LL++C+ +GN+D G + A L+ ++ ++A+ RWEDV VR +M
Sbjct: 720 -WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMG 778
Query: 249 DLGIKK 254
IKK
Sbjct: 779 FKNIKK 784
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSG-ALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQS 63
++ V GV + VVS+L+ C G LE G+ +H Y+ D V +LI MYA+
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 495
Query: 64 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
G + S ++FNGL ++ +W +++ A +G + L+L M + G D +F L
Sbjct: 496 GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGL 555
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEH----YGGFIDLLGRAGLLHEAEELVRKLP 179
SA + ++EEG++L H ++ +K EH + D+ + G E E+V+ LP
Sbjct: 556 SAAAKLAVLEEGQQL-HGLA----VKLGFEHDSFIFNAAADMYSKCG---EIGEVVKMLP 607
Query: 180 DQTDEIIVPLYRALLSACRTYGNID 204
+ + P + L+SA +G +
Sbjct: 608 PSVNRSL-PSWNILISALGRHGYFE 631
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGAL-EHGRWIHDYVNENRIMVDAVVGTALIKMYA 61
MC L G+KP F++ SL+T C +SG++ G +H +V ++ ++ D V TA++ +Y
Sbjct: 32 MCDL---GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYG 88
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
G V S +VF + +++ SWTS++ G + G+ + +++++ M G ++ +
Sbjct: 89 VYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 148
Query: 122 VLSACSHAGLVEE---GRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
V+S+C GL+++ GR++ + + ++ L I +LG G + A +
Sbjct: 149 VISSC---GLLKDESLGRQIIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIF--- 201
Query: 179 PDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 213
DQ E + ++ +A G+I+ R+ + +
Sbjct: 202 -DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
+CS+I G + S L C E GR +H V + + + ++G AL+ MY +
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 392
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
G + +S V + +D +W ++I G A + +KAL F+ M G + +T ++V
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 123 LSACSHAG-LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
LSAC G L+E G+ L H+ + + + I + + G L +++L L ++
Sbjct: 453 LSACLLPGDLLERGKPL-HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 182 TDEIIVPLYRALLSACRTYGN 202
+ + A+L+A +G+
Sbjct: 512 N----IITWNAMLAANAHHGH 528
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 29 GALEHGRW---IHDYVNENRIMVDAVVGTALIKMYAQSG-CVEKSLEVFNGLKEKDTASW 84
G ++H +W IH V + V L++MYA +G VE +L VF + KD SW
Sbjct: 255 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL-VFKQMPTKDLISW 313
Query: 85 TSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSS 144
S++ +G++ AL L +M + G + VTF + L+AC E+GR + H +
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVV 372
Query: 145 TYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
+ N + + G+ G + E+ ++ ++P
Sbjct: 373 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%)
Query: 34 GRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 93
GR I V ++ + V +LI M G V+ + +F+ + E+DT SW SI A
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 94 NGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
NG ++ +F M + + T +LS H + GR +
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGI 266
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 5/224 (2%)
Query: 29 GALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSII 88
GAL G+ IH +V + +D + AL+ MY + G + + FN K KD SW ++
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILL 570
Query: 89 CGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHM 148
G + G+ + +ELF+ M +PD++TFI++L CS + +V +G F M Y +
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGV 629
Query: 149 KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGER 208
PNL+HY +DLLGRAG L EA + ++K+P D + + ALL+ACR + ID+GE
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV---WGALLNACRIHHKIDLGEL 686
Query: 209 LATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 252
A + + +YA +W +V KVR MK+ G+
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 103/238 (43%), Gaps = 38/238 (15%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L V GVKPD + +L C L G+ +H +V +D V ALI MY + G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V+ + +F+ + +D SW ++I G NG ++ LELF AM L PD +T +V+SA
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRK-------- 177
C G GR + H+ T ++ + AG EAE+L +
Sbjct: 307 CELLGDRRLGRDI-HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 178 ------------LPDQT--------------DEIIVPLYRALLSACRTYGNIDMGERL 209
LPD+ DEI V A+LSAC T G++D G L
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVA---AVLSACATLGDLDTGVEL 420
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ V PD + S+++ C G GR IH YV VD V +L +MY +G +
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE 350
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ ++F+ ++ KD SWT++I G N +KA++ + M+ KPD++T AVLSAC+
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
G ++ G +L H ++ + + I++ + + +A ++ +P +
Sbjct: 411 LGDLDTGVEL-HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKPD+ V ++L+ CA G L+ G +H + R++ +V LI MY++ C++K+L
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
++F+ + K+ SWTSII GL +N + +AL M+
Sbjct: 454 DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 3/207 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+ KP K+ + +LL CA AL G+ IH ++ + +D V+ A++ MY++ C +
Sbjct: 490 VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDY 549
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
++EVF +D W SII G NG++ + ELF +E G KPD VTF+ +L AC
Sbjct: 550 AIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIR 609
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G VE G + F SMS+ YH+ P +EHY I+L + G LH+ EE + +P D +
Sbjct: 610 EGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP--FDPPMQM 667
Query: 189 LYRALLSACRTYGNIDMGERLATTLTN 215
L R + AC+ Y +G A L N
Sbjct: 668 LTR-INDACQRYRWSKLGAWAAKRLMN 693
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 32/211 (15%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ + V+P V S++ C++S ALE G+ IH + ++ D VV T++ MY +
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME---------TLGA---- 112
+E + VF+ + KD SWTS + G AM+G T +A ELF+ M LG
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHA 373
Query: 113 ------------------KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEH 154
D+VT + +L+ CS V+ G++ H + N+
Sbjct: 374 HEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA-HGFIYRHGYDTNVIV 432
Query: 155 YGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+D+ G+ G L A R++ + DE+
Sbjct: 433 ANALLDMYGKCGTLQSANIWFRQMSELRDEV 463
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 57 IKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDD 116
I+ Y + GCV+ + E+F + E+D SW ++I A NG +++ +F M G + +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 117 VTFIAVLSACSHAGLVEEGRKL--FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
+F VL +C GL+ + R L H Y N++ +D+ G+ ++ +A +
Sbjct: 163 TSFAGVLKSC---GLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 175 VRKLPDQTD---EIIVPLY 190
++ + +D +IV Y
Sbjct: 220 FDEIVNPSDVSWNVIVRRY 238
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D +V +L C+ ++ G+ H ++ + + +V AL+ MY + G ++ + F
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 74 NGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
+ E +D SW +++ G+A G++ +AL FE M+ + AKP T +L+ C++ +
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPAL 512
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
G K H K ++ G +D+ + A E+ ++ T ++I L+ +
Sbjct: 513 NLG-KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA--TRDLI--LWNS 567
Query: 193 LLSAC 197
++ C
Sbjct: 568 IIRGC 572
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 4/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++P+ +++LL CAQ +L R H Y+ + + GT L+ +YA+ G ++ +
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDVYAKCGSLKHA 621
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF +D +T+++ G A++G+ +AL ++ M KPD V +L+AC HA
Sbjct: 622 YSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHA 681
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL+++G +++ S+ + + MKP +E Y +DL+ R G L +A V ++P + + I
Sbjct: 682 GLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANI--- 738
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ LL AC TY +D+G +A L + +YA+ +WE V ++R+ MK
Sbjct: 739 WGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKK 798
Query: 250 LGIKKVPG 257
+KK G
Sbjct: 799 KEMKKPAG 806
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCA---QSGALEHGRWIHDYV-NENRIMVDAVVGTALIK 58
C ++ +P+ + ++L CA ++ A GR IH YV + + V +L+
Sbjct: 212 FCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVS 271
Query: 59 MYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDV 117
Y + G +E++ +F + KD SW +I G A N + KA +LF + G PD V
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 118 TFIAVLSACSHAGLVEEGRKL 138
T I++L C+ + G+++
Sbjct: 332 TIISILPVCAQLTDLASGKEI 352
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCV-EKSL 70
KP +L C + G +G+ +H Y+ + + D +VG AL+ MYA+ G + +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
F+G+ +KD SW +II G + N A F M +P+ T VL C+
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 131 ---LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
GR++ + ++ ++ + R G + EA L ++
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYV-NENRIMVDAVVGTALIKMYAQSGCVEKS 69
V PD ++S+L CAQ L G+ IH Y+ + ++ D VG ALI YA+ G +
Sbjct: 326 VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAA 385
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
F+ + KD SW +I+ A + K + L L + D VT +++L C +
Sbjct: 386 YWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINV 445
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
+ + +++ H S +AGLLH+ EE L
Sbjct: 446 QGIGKVKEV-HGYSV-------------------KAGLLHDEEE-------------PKL 472
Query: 190 YRALLSACRTYGNIDMGERLATTLT 214
ALL A GN++ ++ L+
Sbjct: 473 GNALLDAYAKCGNVEYAHKIFLGLS 497
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSGCVEK 68
G++P+ F + L+ CA +L GR IH Y+ N V + T+L+ MYA+ G + K
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINK 600
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+ +VF + ++I A+ G +A+ L+ ++E +G KPD++T VLSAC+H
Sbjct: 601 AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNH 660
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AG + + ++F + S MKP LEHYG +DLL AG +A L+ ++P + D ++
Sbjct: 661 AGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMI- 719
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
++L+++C ++ + L+ L + YA W++V K+R MK
Sbjct: 720 --QSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMK 777
Query: 249 DLGIKKVPG 257
G+KK PG
Sbjct: 778 AKGLKKKPG 786
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Query: 1 MGMCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMY 60
MG ++ + PD F+V ++ C GR +H YV ++ + V ++L MY
Sbjct: 159 MGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMY 218
Query: 61 AQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
+ G ++ + +VF+ + +++ +W +++ G NGK +A+ LF M G +P VT
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
LSA ++ G VEEG++ H+++ M+ + ++ + GL+ AE + ++
Sbjct: 279 TCLSASANMGGVEEGKQ-SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 103/208 (49%), Gaps = 2/208 (0%)
Query: 3 MCSLIVI-GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYA 61
MC L+ + +K D + +L++ A++ L+ G+ + Y + D V+ + ++ MYA
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 62 QSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+ G + + +VF+ EKD W +++ A +G + +AL LF M+ G P+ +T+
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
++ + G V+E + +F M S+ + PNL + ++ + + G EA +RK+ +
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 182 TDEIIVPLYRALLSACRTYGNIDMGERL 209
LSAC ++ +G +
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+P + V + L+ A G +E G+ H N + +D ++GT+L+ Y + G +E +
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ + EKD +W II G G A+ + + M K D VT ++SA +
Sbjct: 329 EMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAART 388
Query: 130 GLVEEGRK-----LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
++ G++ + HS S + + +D+ + G + +A +K+ D T E
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTV------MDMYAKCGSIVDA----KKVFDSTVE 438
Query: 185 IIVPLYRALLSA 196
+ L+ LL+A
Sbjct: 439 KDLILWNTLLAA 450
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 131/248 (52%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV D+F + ++ + LE + H + N + V TAL+ Y++ G V+ +
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF+ L K+ SW +++ G A +G+ A++LFE M P+ VTF+AVLSAC+++
Sbjct: 380 RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYS 439
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
GL E+G ++F SMS + +KP HY I+LLGR GLL EA +R+ P +T V +
Sbjct: 440 GLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKT---TVNM 496
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALL+ACR N+++G +A L + +Y S + + V ++
Sbjct: 497 WAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLES 556
Query: 250 LGIKKVPG 257
G+ +P
Sbjct: 557 KGLSMMPA 564
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
+L A G++ G+ +H + ++ + V LI MY++ G +E + F + EK
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 140
T +W ++I G A++G + +AL L M G D T ++ + +E ++
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 141 SMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
S+ + + +D + G + A + KLP +
Sbjct: 350 SLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKN 390
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 128/248 (51%), Gaps = 3/248 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++ D+ + ++ A GALE G+ +H Y ++ A V +L+ MY++ G +E +
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA 582
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+VF + D SW ++ GLA NG + AL FE M +PD VTF+ +LSACS+
Sbjct: 583 KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNG 642
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
L + G + F M Y+++P +EHY + +LGRAG L EA +V + + + +I
Sbjct: 643 RLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI--- 699
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
++ LL ACR GN+ +GE +A + +Y + + E K R+ M +
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759
Query: 250 LGIKKVPG 257
+ K G
Sbjct: 760 KRLSKKLG 767
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ GV P++F V LL + G LE G+ IH + I ++ V+ T+L+ Y+Q
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+E ++ V N E+D WTS++ G N + +A+ F M +LG +P++ T+ A+LS
Sbjct: 275 MEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Query: 126 CSHAGLVEEGRKLFHSMS 143
CS ++ G+++ HS +
Sbjct: 335 CSAVRSLDFGKQI-HSQT 351
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G P++F S++ CA + +G +H V + ++VVG++L +Y++ G
Sbjct: 115 MMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+++ E+F+ L+ DT SWT +I L K +AL+ + M G P++ TF+ +L A
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 126 CSHAGLVEEGRKLFHS 141
S GL E K HS
Sbjct: 235 SSFLGL--EFGKTIHS 248
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+P+ + +L C++ + IH Y+ + + VVG +L+ YA S V+ +
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
V +K +D ++TS++ GK AL + M G + D ++ +SA ++ G
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL--PD 180
+E G+ L H S +D+ + G L +A+++ ++ PD
Sbjct: 543 ALETGKHL-HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPD 593
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 4/248 (1%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++P++ V LL+ Q G+ +G H ++ + V AL+ MY+ G +E +
Sbjct: 675 LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGM 734
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSACSHA 129
+VF ++W S+I +G KA+ELF+ + + +P+ +FI++LSACSH+
Sbjct: 735 KVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHS 794
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G ++EG + M + +KP EH +D+LGRAG L EA E + + + +
Sbjct: 795 GFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK---AGV 851
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+ ALLSAC +G+ +G+ +A L ++ Y WE+ ++R ++D
Sbjct: 852 WGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVED 911
Query: 250 LGIKKVPG 257
+KK+PG
Sbjct: 912 NALKKLPG 919
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDA--VVGTALIKMYAQSGCVE 67
G + D +++ C+ L G +H V ++ +A VG ++I MY++ G E
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSAC 126
+ VF L +D S +I+ G A NG +A + M+++ +PD T +++ S C
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPN-LEHYGGFIDLLGRAGLLHEAEELVR 176
EGR + H + M+ LE ID+ G+ GL +AE L +
Sbjct: 404 GDLSFSREGRAV-HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK 453
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 34/227 (14%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++ D ++ ++ G + GR H ++ +D + LI MY + +E ++
Sbjct: 577 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 636
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+VF + + + SW +I L+ N E+F+ L +P+++TF+ +LSA + G
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQN---KAGREVFQLFRNLKLEPNEITFVGLLSASTQLG 693
Query: 131 LVEEGRKLF-HSMSSTYHMKP-----------------------------NLEHYGGFID 160
G + H + + P ++ + I
Sbjct: 694 STSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVIS 753
Query: 161 LLGRAGLLHEAEELVRKLPDQTD-EIIVPLYRALLSACRTYGNIDMG 206
G G+ +A EL ++L ++ E + +LLSAC G ID G
Sbjct: 754 AHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 37 IHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 96
+H E ++ D+ + AL+ +YA+ + + VF ++ +D SW +I+ NG
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 97 TNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM--SSTYHMKPNLEH 154
K+L+ F++M G + D VTF V+SACS + G L H + S Y + ++
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESL-HGLVIKSGYSPEAHVSV 328
Query: 155 YGGFIDLLGRAGLLHEAEELVRKL 178
I + + G AE + +L
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEEL 352
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSGCVEKS 69
++PD VVS+ + C GR +H Y + A+ V ++I MY + G ++
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPDDVTFIAVLSAC 126
+F +D SW S+I + NG T+KA LF+ + E +K T +A+L++C
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 5/246 (2%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D+ + +L C G E G IH Y + D +G +LI MYA+ + ++++F
Sbjct: 520 DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIF 579
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH--AGL 131
N ++E D SW S+I + ++AL L+ M KPD +T V+SA + +
Sbjct: 580 NTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNK 639
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
+ R LF SM + Y ++P EHY F+ +LG GLL EAE+ + +P Q + V + R
Sbjct: 640 LSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPE---VSVLR 696
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
ALL +CR + N + +R+A + + K IY+++ W +R +M++ G
Sbjct: 697 ALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERG 756
Query: 252 IKKVPG 257
+K P
Sbjct: 757 YRKHPA 762
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ---SGCVE 67
V+P+++ V++LT C + G IH + ++ + V +L+ +Y + S C +
Sbjct: 177 VQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-D 235
Query: 68 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVLSAC 126
L++F+ + ++D ASW +++ L GK++KA +LF M + G D T +LS+C
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 127 SHAGLVEEGRKL 138
+ + ++ GR+L
Sbjct: 296 TDSSVLLRGREL 307
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 36/209 (17%)
Query: 8 VIGVKPDKFIVVSLLTCCAQSGALEHGRWIH----------------------------- 38
V G D F + +LL+ C S L GR +H
Sbjct: 278 VEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 39 --DYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 96
+ + E + DAV T +I Y G V+ ++E+F + EK+T ++ +++ G NG
Sbjct: 338 KVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH 397
Query: 97 TNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGR--KLFHSMSSTYHMKPNLEH 154
KAL+LF M G + D + + + AC GLV E + + H + N
Sbjct: 398 GLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCI 454
Query: 155 YGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+D+ R + +AEE+ + P D
Sbjct: 455 QTALLDMCTRCERMADAEEMFDQWPSNLD 483
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 5/249 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V+PDKF S+L+ + L+HG +H V + +D V T+L++MY ++G V+ +
Sbjct: 331 SVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLA 389
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMETLGAKPDDVTFIAVLSACSH 128
+ VF KD W ++I GLA N + ++L +F + + KPD VT + +L AC +
Sbjct: 390 MGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCY 449
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
AG V EG ++F SM + + P EHY I+LL R G+++EA+++ K+P + I
Sbjct: 450 AGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHI-- 507
Query: 189 LYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 248
+ +L A G+ + E +A T+ + IY RWE+ K+R M
Sbjct: 508 -WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMN 566
Query: 249 DLGIKKVPG 257
+ +K G
Sbjct: 567 EHKLKSAQG 575
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 11 VKPDKF---IVVSLLTCCAQSGALEHGRWIH-DYVNENRIMVDAVVGTALIKMYAQSGCV 66
++P +F I+ SL+TC + HG IH + + + VV +++ MY + G
Sbjct: 132 IRPTEFTFSILASLVTC------VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVF 185
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+ +L VF ++++D SW +I + +G AL+ F M + +PD+ T V+S C
Sbjct: 186 DYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
S + +G++ ++ N G ID+ + L ++ +L R+L
Sbjct: 246 SDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 53 GTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA 112
G +++Y +SG V +L++F+ + +K+T +W + GL NG N AL+LF+ M
Sbjct: 42 GNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM----P 97
Query: 113 KPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKP 150
+ D V++ ++S G E G ++F M + ++P
Sbjct: 98 ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRP 134
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 120/215 (55%), Gaps = 10/215 (4%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE--KDTASWTSIICGLAMNGKTNKALELFEA 106
+ V +LI Y++ G +E SL FN L+E ++ SW S+I G A NG+ +A+ +FE
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 107 M-ETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNL---EHYGGFIDLL 162
M + +P++VT + VL AC+HAGL++EG F+ + Y PNL EHY +D+L
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDML 379
Query: 163 GRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXX 222
R+G EAEEL++ +P + ++ALL C+ + N + + A+ + +
Sbjct: 380 SRSGRFKEAEELIKSMPLDPG---IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVS 436
Query: 223 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPG 257
Y++ + W++V+ +R KMK+ G+K+ G
Sbjct: 437 SYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTG 471
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L+ +G++P++F +++ S ++ G+ +H Y + + + VG+A++ Y +
Sbjct: 84 LLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLST 143
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ + F+ ++ + S T++I G + +AL LF AM VT+ AV+
Sbjct: 144 LTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGG 199
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPN 151
S G EE F M + PN
Sbjct: 200 FSQTGRNEEAVNTFVDMLREGVVIPN 225
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 130/250 (52%), Gaps = 5/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
VKP+ VS+L+ C+ L G+ IH ++++ + +V +AL+ MY++SG + +
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA 385
Query: 70 LEVF-NGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
++F NGL ++D SW S+I A +G +A+E++ M G KP VT++ +L ACS
Sbjct: 386 RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS 445
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIV 187
HAGLVE+G + F + + EHY +DL GRAG L + + +
Sbjct: 446 HAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINC---DDARLSR 502
Query: 188 PLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKM 247
Y A+LSAC + + + + + + IYA+ + E+ ++R KM
Sbjct: 503 SFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKM 562
Query: 248 KDLGIKKVPG 257
K+ G+KK PG
Sbjct: 563 KEKGLKKQPG 572
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
+ V +I YAQSG ++K+LE+F+ + E++ SW S++ L G+ ++A+ LFE M
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM- 197
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
+ D V++ A++ + G V+E R+LF M + N+ + I + +
Sbjct: 198 ---PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP-----ERNIISWNAMITGYAQNNRI 249
Query: 169 HEAEELVRKLPDQ 181
EA++L + +P++
Sbjct: 250 DEADQLFQVMPER 262
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 13 PDKFIVV--SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
P++ +V ++T + G + R + D V+ + + V TA++ Y +S + +
Sbjct: 73 PERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAE 129
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F + E++ SW ++I G A +G+ +KALELF+ M + + V++ +++ A G
Sbjct: 130 MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRG 185
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
++E LF M + ++ + +D L + G + EA L +P++ + +
Sbjct: 186 RIDEAMNLFERMP-----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN----IISW 236
Query: 191 RALLSACRTYGNIDMGERL 209
A+++ ID ++L
Sbjct: 237 NAMITGYAQNNRIDEADQL 255
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 39/182 (21%)
Query: 26 AQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWT 85
A++G ++ R + D + E I + A+I YAQ+ ++++ ++F + E+D ASW
Sbjct: 213 AKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWN 268
Query: 86 SIICGLAMNGKTNKALELFEAM----------------------ETLG----------AK 113
++I G N + NKA LF+ M E L K
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 114 PDDVTFIAVLSACSH-AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAE 172
P+ T++++LSACS AGLV EG+++ +S + H K + +++ ++G L A
Sbjct: 329 PNVGTYVSILSACSDLAGLV-EGQQIHQLISKSVHQKNEIV-TSALLNMYSKSGELIAAR 386
Query: 173 EL 174
++
Sbjct: 387 KM 388
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 56 LIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPD 115
LI + G + ++ ++F+GL E+D +WT +I G G +A ELF+ +++ + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKN 108
Query: 116 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 175
VT+ A++S + + LF M + N+ + ID ++G + +A EL
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 176 RKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
++P++ + +AL+ R +++ ER+
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM 197
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKP++F +V+LL Q G+L GRW+HDY ++N ++D +GTALI MY++ G ++ +
Sbjct: 247 VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDAR 306
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVLSACSHA 129
+VF+ ++ K A+W S+I L ++G +AL LFE ME + +PD +TF+ VLSAC++
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANT 366
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
G V++G + F M Y + P EH I LL +A + +A LV + D
Sbjct: 367 GNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 7 IVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCV 66
I G D F +L+ + G + GR + D + I V T ++ + +
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI----VSWTTMLYGLVSNSQL 201
Query: 67 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+ + VFN + ++ SWT++I N + ++A +LF M+ KP++ T + +L A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGF----------IDLLGRAGLLHEAEEL 174
+ G + GR + + H GF ID+ + G L +A ++
Sbjct: 262 TQLGSLSMGRWVH-----------DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKV 308
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 16/246 (6%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+P+ V+++ A+ AL G +H + + VG +L+ MYA+ G +E S +
Sbjct: 601 QPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEK 660
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F + K SW +++ A +G + A+ LF +M+ KPD V+F++VLSAC HAGL
Sbjct: 661 CFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGL 720
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
VEEG+++F M + ++ +EHY +DLLG+AGL EA E++R++ +T V ++
Sbjct: 721 VEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTS---VGVWG 777
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
ALL++ R + N+ + L ++ Y+ R +VN V
Sbjct: 778 ALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------ 824
Query: 252 IKKVPG 257
IKKVP
Sbjct: 825 IKKVPA 830
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PDK+ L CA S + G IHD + E + D +GTAL++MY ++ + +
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+VF+ + KD +W +++ GLA NG ++ AL LF M + D V+ ++ A S
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 29 GALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSII 88
G L G IHDY + ++ D V T+L+ MY++ G +E + ++F ++++D SW+++I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 89 CGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHM 148
G+ ++A+ LF M + KP+ VT +VL C+ G+ + H + +
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADI 432
Query: 149 KPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
+ LE I + + G A + +LP
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLP 463
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 5/170 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ I +KP+ + S+L CA A G+ IH Y + I + TA+I MYA+ G
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+L+ F L KD ++ ++ G G NKA ++++ M+ G PD T + +L
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 126 CSHA-----GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 170
C+ G G+ + H S H+ L + D L A +L +
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD 561
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 95/236 (40%), Gaps = 41/236 (17%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD +V +L CA G ++ + ++ + V ALI M+ + + +
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 70 LEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA--- 125
+ +F+ EK T SW ++ G ++G+ +A+ F M+ +P+ VTF+ ++ A
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 126 -------------------CSHA-------------GLVEEGRKLFHSMSSTYHMKPNLE 153
CS G++E K F +S+ Y + N
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT- 675
Query: 154 HYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
+ GL A L + + + + ++LSACR G ++ G+R+
Sbjct: 676 ----MLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 3/220 (1%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+ ++SLL CA + R IH V + V AL YA+SG +E S +
Sbjct: 522 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTI 581
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F G++ KD +W S+I G ++G AL LF M+T G P+ T +++ A G V
Sbjct: 582 FLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNV 641
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
+EG+K+F+S+++ YH+ P LEH + L GRA L EA + ++++ Q++ P++ +
Sbjct: 642 DEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSE---TPIWES 698
Query: 193 LLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYA 232
L+ CR +G+IDM A L +++ IYA
Sbjct: 699 FLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYA 738
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+ + GV P+ ++S ++ C+ + G +H + + D +VG +L+ MY++ G
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+E + +VF+ +K KD +W S+I G G KA ELF M+ +P+ +T+ ++S
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G E LF M ++ N + I + G EA EL RK+
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
SL G K + + LL C SG++ GR +H D V T L+ MYA+ G
Sbjct: 71 SLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGL-FTEPDVFVETKLLSMYAKCG 129
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
C+ + +VF+ ++E++ +W+++I + + + +LF M G PDD F +L
Sbjct: 130 CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQ 189
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
C++ G VE G K+ HS+ M L + + + G L A + R++ ++
Sbjct: 190 GCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD-- 246
Query: 185 IIVPLYRALLSACRT 199
++ LL+ C+
Sbjct: 247 -VIAWNSVLLAYCQN 260
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD F+ +L CA G +E G+ IH V + + V +++ +YA+ G ++ +
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ F ++E+D +W S++ NGK +A+EL + ME G P VT+ ++ +
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G + L M T+ + ++ + I L G+ ++A ++ RK+
Sbjct: 296 GKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D + S++T Q+G + + + + + + +I Y ++G +++++F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 74 -----NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+G +++TA+W II G NGK ++ALELF M+ P+ VT +++L AC++
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L+ G PD+ V L CA +LEH + +HD+ +++ D + +I M+ +
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ + VF+ + +KD SW ++C + NG + AL LFE M G KP++ TF+ V A
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 346
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C+ G +EE F SM + + + P EHY G + +LG+ G L EAE+ +R LP E
Sbjct: 347 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLP---FEP 403
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNV 216
+ A+ + R +G+ID+ + + + +V
Sbjct: 404 TADFWEAMRNYARLHGDIDLEDYMEELMVDV 434
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+++ ++PD+ S+L+ CA+ A+ + + V + V +LI Y+++G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ ++L F+ ++E D SWTS+I LA +G ++L++FE+M +PD +TF+ VLSA
Sbjct: 393 LSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSA 451
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
CSH GLV+EG + F M+ Y ++ EHY IDLLGRAG + EA +++ +P +
Sbjct: 452 CSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTE 507
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 43/237 (18%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+ D F SLL+ C +E G+ IH + + D V TAL+ MYA+S + + E
Sbjct: 242 RGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARE 297
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS---- 127
F + ++ SW ++I G A NG+ +A+ LF M +PD++TF +VLS+C+
Sbjct: 298 CFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSA 357
Query: 128 -------HAGLVEEGRKLFHSMSST-----------------YH--MKPNLEHYGGFIDL 161
A + ++G F S++++ +H +P+L + I
Sbjct: 358 IWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGA 417
Query: 162 LGRAGLLHEA----EELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 214
L G E+ E +++KL Q D+I + +LSAC G + G R +T
Sbjct: 418 LASHGFAEESLQMFESMLQKL--QPDKIT---FLEVLSACSHGGLVQEGLRCFKRMT 469
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 1 MGMCSL---IVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALI 57
+G C L + V D + L+ C S ++ G +H + + + T+L+
Sbjct: 125 LGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 58 KMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--ETLGAKPD 115
Y + G + ++ VF + ++D W +++ +NG ++A L + M + + D
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGD 244
Query: 116 DVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
TF ++LSAC +E+G+++ H++ + ++ +++ ++ L +A E
Sbjct: 245 YFTFSSLLSACR----IEQGKQI-HAILFKVSYQFDIPVATALLNMYAKSNHLSDARE 297
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 7/249 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGT--ALIKMYAQSGCVEKS 69
+ D F + S++ C+ L G H R D V+ AL+ MY ++G E +
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAI--RTGFDCVMSVCGALVDMYGKNGKYETA 557
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+F+ D W S++ + +G KAL FE + G PD VT++++L+ACSH
Sbjct: 558 ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHR 617
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G +G+ L++ M +K +HY ++L+ +AGL+ EA EL+ + P ++ L
Sbjct: 618 GSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ--AEL 674
Query: 190 YRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKD 249
+R LLSAC N+ +G A + + +YA RWEDV ++R K++
Sbjct: 675 WRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRG 734
Query: 250 LGIKKVPGI 258
L K PG+
Sbjct: 735 LASSKDPGL 743
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD++ + ++ A+ HG+ +H V + VGT L+ MY ++ E + +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VF+ +KE+D WT +I G + G + A++ F M + D + +V+ ACS +
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
+ +G ++FH ++ + G +D+ G+ G +E E + L D + +
Sbjct: 519 LRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNG-KYETAETIFSLASNPD---LKCWN 573
Query: 192 ALLSACRTYGNID 204
++L A +G ++
Sbjct: 574 SMLGAYSQHGMVE 586
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
++++ GV P +F +L C++ G+ G+ IH + + + D + AL+ MY G
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 65 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGA-KPDDVTFIAVL 123
+ ++ VF + + SW SII G + NG +A+ ++ + + +PD+ TF A +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 124 SACSHAGLVEEGRKLFH 140
SA + G KL H
Sbjct: 410 SATAEPERFVHG-KLLH 425
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
VKP+ SL+ CA + G ++ + + + VV T+++ MY+ G +E +
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
+F+ + +D +W ++I G N K L F M G P T+ VL+ CS G
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
G KL H+ +L +D+ G + EA
Sbjct: 315 SYSLG-KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 38/255 (14%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
C++ V G+ PDK + S+L+ A+ LE G+ +H ++ V +L+ MY +
Sbjct: 418 FCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTK 477
Query: 63 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAV 122
G +E + +FN ++ +D +WT +I G A NG
Sbjct: 478 CGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG--------------------------- 510
Query: 123 LSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
L+E+ ++ F SM + Y + P EHY IDL GR+G + E+L+ ++ +
Sbjct: 511 --------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEP 562
Query: 183 DEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNK 242
D + ++A+L+A R +GNI+ GER A TL ++ +Y++A R ++
Sbjct: 563 DATV---WKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAAN 619
Query: 243 VRSKMKDLGIKKVPG 257
VR MK I K PG
Sbjct: 620 VRRLMKSRNISKEPG 634
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGA-LEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+K D F + S+L C A S ++ H + + +V AL+ MYA+ G ++ +
Sbjct: 324 MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSA 383
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L+VF G+ EKD SWT+++ G NG ++AL+LF M G PD + +VLSA +
Sbjct: 384 LKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAEL 443
Query: 130 GLVEEGRKL 138
L+E G+++
Sbjct: 444 TLLEFGQQV 452
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KP+++ + S+L C L G IH + + +D V L+ MYAQ + ++
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 70 LEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
+F ++ EK+ +WTS++ G + NG KA+E F + G + + TF +VL+AC+
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G ++ H K N+ ID+ + + A L+ + + D+++
Sbjct: 240 VSACRVGVQV-HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM--EVDDVVS- 295
Query: 189 LYRALLSACRTYGNIDMGERLA 210
+ +++ C G I GE L+
Sbjct: 296 -WNSMIVGCVRQGLI--GEALS 314
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G + +++ S+LT CA A G +H + ++ + V +ALI MYA+ +E +
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESA 281
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ G++ D SW S+I G G +AL +F M K DD T ++L+
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD 80
LL ++SG ++ R + D + E D +I Y+ S + + ++F K+
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKN 89
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF- 139
T SW ++I G +G +A LF M++ G KP++ T +VL C+ L+ G ++
Sbjct: 90 TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
H++ + + + N+ G + + + + EAE L + + + +
Sbjct: 150 HTIKTGFDLDVNV--VNGLLAMYAQCKRISEAEYLFETMEGEKNNV 193
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 1/240 (0%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+ ++F++ S+++ C+ G L+ G+ H V + VV T+L+ MYA+ G + + +
Sbjct: 233 RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEK 292
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
+F ++ S+TS+I A +G A++LF+ M P+ VT + VL ACSH+GL
Sbjct: 293 IFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGL 352
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYR 191
V EG + M+ Y + P+ HY +D+LGR G + EA EL + + ++ + L+
Sbjct: 353 VNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL-LWG 411
Query: 192 ALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLG 251
ALLSA R +G +++ + L YA + WED +R +MK G
Sbjct: 412 ALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V P+++ S+ C+ G+ IH + + + + VV ++L+ MY + VE +
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETAR 186
Query: 71 EVFNGL--KEKDTASWTSIICGLAMNGKTNKALELFEAMET--LGAKPDDVTFIAVLSAC 126
VF+ + ++ SWTS+I A N + ++A+ELF + + + +V+SAC
Sbjct: 187 RVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISAC 246
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
S G ++ G K+ H + + + N +D+ + G L AE++ ++
Sbjct: 247 SSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 47/200 (23%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 107
D L+ Y + + + ++F+ + E + SWTS+I G GK AL +F+ M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 108 ETLGAKPDDVTFIAVLSACS-----------HAGL------------------------V 132
E P++ TF +V ACS HA L V
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL-----PDQTDEIIV 187
E R++F SM N+ + I + HEA EL R D+ ++ ++
Sbjct: 183 ETARRVFDSMIG---YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 188 PLYRALLSACRTYGNIDMGE 207
+++SAC + G + G+
Sbjct: 240 A---SVISACSSLGRLQWGK 256
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 108/213 (50%), Gaps = 9/213 (4%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 108
D V +LI Y +SG E S +VF+ L + TSII G A NG +++ M+
Sbjct: 453 DVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMD 512
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
+ PD+VT ++VLS CSH+GLVEEG +F S+ S Y + P + Y +DLLGRAGL+
Sbjct: 513 RMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLV 572
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXX 228
+AE L+ + D + + +LL +CR + N +G R A L N++
Sbjct: 573 EKAERLLLQARGDADCVA---WSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVS 629
Query: 229 XIYASADRWE------DVNKVRSKMKDLGIKKV 255
Y +E ++ R M+++G V
Sbjct: 630 KFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSGCVEK 68
GV + ++ C+ + G+ +H V ++ + + V L+ Y+ G +
Sbjct: 208 GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG 267
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
S+ FN + EKD SW SI+ A G +L+LF M+ G +P F++ L+ CS
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
++ G+++ + +L ID+ G+ + + L + LP
Sbjct: 328 NSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 89/198 (44%), Gaps = 4/198 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G++ S+L+ C+ G +H V + V +AL+ +YA
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL 162
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V+ +L++F+ + +++ A ++ G++ + E++ ME G + +T+ ++
Sbjct: 163 VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRG 222
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
CSH LV EG++L + + N+ +D G L + +P++
Sbjct: 223 CSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD--- 279
Query: 186 IVPLYRALLSACRTYGNI 203
V + +++S C YG++
Sbjct: 280 -VISWNSIVSVCADYGSV 296
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAV-VGTALIKMYAQSGCVEK 68
G +P +S L C+++ ++ G+ IH YV + V ++ V +ALI MY + +E
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
S ++ L + S++ L G T +E+F M G D+VT VL A S
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD + +LT C+ AL+ G+ +H ++ + V +IKMY + G + +
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
F+ + K + +WT+II N A+ FE M + G P+ TF AVLS CS AG
Sbjct: 576 SFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGF 635
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
V+E + F+ M Y+++P+ EHY I+LL R G + EA+ L
Sbjct: 636 VDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 3/163 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +PD + ++L CA+ A++ G+ IH Y +N + + + T+L+ MY++ G E
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ +F+ L++++ +WT++I N +E+F M +PD VT VL+ CS
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL 532
Query: 130 GLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
++ G++L H + + P + I + G+ G L A
Sbjct: 533 KALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVD-AVVGTALIKMYAQSGCVEKS 69
+ P+ I+ ++L AL+ G+ +H +V +++ V+ V + LI +Y + G +
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASG 371
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
VF G K+++ SWT+++ G A NG+ ++AL M+ G +PD VT VL C+
Sbjct: 372 RRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAEL 431
Query: 130 GLVEEGRKL 138
+++G+++
Sbjct: 432 RAIKQGKEI 440
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 3/160 (1%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+GV + + + ++ A + AL G H +N + + T+L+ MY + G V
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 69 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ETLGAKPDDVTFIAVLSACS 127
+ VF+ + E+D W ++I GLA N + +AL LF M P+ V +L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG 327
Query: 128 HAGLVEEGRKLF-HSMSSTYHMKPNLEHYGGFIDLLGRAG 166
++ G+++ H + S +++ H G IDL + G
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVH-SGLIDLYCKCG 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ + +LL C + +L HG+ +H ++ N + + + T L+ MY G V+ +
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKT--NKALELFEAMETLGAKPDDVTFIAVLSACS 127
+VF+ + SW +++ G ++GK L F M LG + + V + +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 128 HAGLVEEGRK 137
A + +G K
Sbjct: 226 GASALRQGLK 235
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P F + L C + AL+ + +H+++ + + D ++I+MY+ G VE +L V
Sbjct: 182 PRLFWIAQL---CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTV 238
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
FN + E++ +W +I A NG+ A++ F + G KPD F + AC G +
Sbjct: 239 FNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDM 298
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
EG F SM Y + P +EHY + +L G L EA V + D L+
Sbjct: 299 NEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD-----LWET 353
Query: 193 LLSACRTYGNIDMGER 208
L++ R +G++ +G+R
Sbjct: 354 LMNLSRVHGDLILGDR 369
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 91/151 (60%), Gaps = 6/151 (3%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KPD+ ++S+L+ C LE G I DY+ +N+I ++ +LI MYA+ G + ++
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 72 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGL 131
VF+ +KE+D S+ ++ A NG + L L M+ G +PD VT+ +VL+AC+ AGL
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514
Query: 132 VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 162
++EG+++F S+ + P +HY +DLL
Sbjct: 515 LKEGQRIFKSIRN-----PLADHYAC-MDLL 539
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 36/237 (15%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
V+ + F+ +LL A+ ++ R I + + R + V A+I Y + G + +
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSAR 351
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLG-AKPDDVTFIAVLSACSHA 129
++F+ + +++ SW S+I G A NG+ A+E FE M G +KPD+VT I+VLSAC H
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ-------- 181
+E G + + +K N Y I + R G L EA+ + ++ ++
Sbjct: 412 ADLELGDCIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 182 --------------------TDEIIVP---LYRALLSACRTYGNIDMGERLATTLTN 215
DE I P Y ++L+AC G + G+R+ ++ N
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 37 IHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 96
+ D + EN D V T +I +A+ +E + + F+ + EK SW +++ G A NG
Sbjct: 189 LFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGF 244
Query: 97 TNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYG 156
T AL LF M LG +P++ T++ V+SACS R L + ++ N
Sbjct: 245 TEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEK-RVRLNCFVKT 303
Query: 157 GFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 213
+D+ + + A + +L Q + + + A++S G++ +L T+
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVT---WNAMISGYTRIGDMSSARQLFDTM 357
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 13/212 (6%)
Query: 5 SLIVIGVKPDKFIVVS------LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIK 58
+L VI + DK +V L C + ALE R +HD + +DA +I+
Sbjct: 96 ALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYHTVIE 151
Query: 59 MYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVT 118
MY+ + +L VFN + ++++ +W ++I LA NG+ +A+++F G KPD
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 119 FIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
F AV AC G + EG F SM Y M ++E Y I++L G L EA + V ++
Sbjct: 212 FKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM 271
Query: 179 PDQTDEIIVPLYRALLSACRTYGNIDMGERLA 210
T E V ++ L++ C G +++G+R A
Sbjct: 272 ---TVEPSVEMWETLMNLCWVQGYLELGDRFA 300
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 3/193 (1%)
Query: 18 VVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK 77
++ L C ++ L+ + +H ++ + +D L++MY+ G ++ VF +
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
EK+ +W II A NG A+++F + G PD F + AC G V+EG
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 197
F SMS Y + P++E Y +++ G L EA E V ++P + + V ++ L++
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPN---VDVWETLMNLS 433
Query: 198 RTYGNIDMGERLA 210
R +GN+++G+ A
Sbjct: 434 RVHGNLELGDYCA 446
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 102/190 (53%), Gaps = 5/190 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P++F V S+L C++ AL GR +H V + I D VGT+L+ MYA+ G + +V
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 73 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLV 132
F+G+ ++T +WTSII A G +A+ LF M+ +++T +++L AC G +
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 133 EEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRA 192
G++L H+ ++ N+ + L + G +A ++++LP + V + A
Sbjct: 402 LLGKEL-HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD----VVSWTA 456
Query: 193 LLSACRTYGN 202
++S C + G+
Sbjct: 457 MISGCSSLGH 466
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I GV+P+ F S L CA S +L GR IH +N + + VG+ALI MYA+ G
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V ++ VF+ + EK+ SW ++I G A NG +AL+L ME G + DD F +LS
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 126 CSHAGLVE 133
C L E
Sbjct: 597 CGDIELDE 604
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
+ VVS+L C GAL G+ +H + +N I + +G+ L+ +Y + G + V
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 74 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVE 133
L +D SWT++I G + G ++AL+ + M G +P+ T+ + L AC+++ +
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 134 EGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
GR + HS++ H N+ I + + G + EA + +P++
Sbjct: 504 IGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKN 551
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 17 IVVSLLTCCAQSGALEHGRWIHDYVNENRIMV-DAVVGTALIKMYAQSGCVEKSLEVFNG 75
+ V LL C++ E GR +H N ++ V + +V ++L+ YAQ G + +L F+
Sbjct: 186 MFVCLLNLCSRRAEFELGRQVHG--NMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDM 243
Query: 76 LKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
++EKD SWT++I + G KA+ +F M P++ T ++L ACS + G
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG 303
Query: 136 RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
R++ HS+ +K ++ +D+ + G + + ++ + ++
Sbjct: 304 RQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 3/201 (1%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G D ++ L C + ALE R +H+ + D A+I+MY+ V+ +
Sbjct: 114 GYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDA 173
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
L+VF + E ++ + ++ NG +A++LF + G KP+ F V S C+
Sbjct: 174 LKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLT 233
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G V+EG F +M Y + P++EHY +L +G L EA V ++P + V +
Sbjct: 234 GDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPS---VDV 290
Query: 190 YRALLSACRTYGNIDMGERLA 210
+ L++ R +G++++G+R A
Sbjct: 291 WETLMNLSRVHGDVELGDRCA 311
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 7/211 (3%)
Query: 51 VVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-ET 109
VV +ALI MY++ G ++ + +F + K+ W +I G A NG + +A++LF + +
Sbjct: 356 VVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Query: 110 LGAKPDDVTFIAVLSACSHAGL-VEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
KPD TF+ +L+ CSH + +E F M + Y +KP++EH I +G+ G +
Sbjct: 416 RFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEV 475
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNV--KXXXXXXXXX 226
+A++++++ D + +RALL AC ++ + +A + +
Sbjct: 476 WQAKQVIQEFGFGYDGVA---WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIV 532
Query: 227 XXXIYASADRWEDVNKVRSKMKDLGIKKVPG 257
+YA +RW +V ++R M++ G+ K G
Sbjct: 533 MSNLYAYHERWREVGQIRKIMRESGVLKEVG 563
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 4/201 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
LI G KPD +V LL G + R +H YV ++ + + + +L++ Y S
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 66 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+E + +VF+ + + D SW S++ G +G+ + + LF + P++ +F A L+A
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
C+ L G + + K N+ ID+ G+ G + +A LV + ++ D +
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA-VLVFQHMEEKDTV 224
Query: 186 IVPLYRALLSACRTYGNIDMG 206
+ A++++C G +++G
Sbjct: 225 S---WNAIVASCSRNGKLELG 242
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHD-YVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
V P++F + L CA+ G IH V + VVG LI MY + G ++ +
Sbjct: 152 VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA 211
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+ VF ++EKDT SW +I+ + NGK L F M PD VT+ ++ A +
Sbjct: 212 VLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAFVKS 267
Query: 130 GLVEEGRKLFHSM 142
G ++ M
Sbjct: 268 GDFNNAFQVLSDM 280
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 20 SLLTCCAQSGALEHGRWI-HDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKE 78
+++ C+++G LE G W H N D V LI + +SG + +V + +
Sbjct: 228 AIVASCSRNGKLELGLWFFHQMPNP-----DTVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
Query: 79 KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKL 138
+++SW +I+ G + K+ +A E F M + G + D+ + ++++ A A V L
Sbjct: 283 PNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYS-LSIVLAAVAALAVVPWGSL 341
Query: 139 FHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQT 182
H+ + + + ID+ + G+L AE + +P +
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKN 385
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P++ I +L+ +S +E G I +++ ++ + + T LI+ Y G + +
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
EVFN + + D ++ ++ GL NGK KAL +FE M + VT+ ++
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
G VE+ LF S+ S MKPN+ Y I R GL+HEA+ L +K+ +
Sbjct: 443 MCKLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P+ +L+T + G W+ + + RI + + TALI + + G + ++
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 70 LEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E++N + + D ++ S+I GL M G ++A ++F ME G P++V + ++
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 126 CSHAGLVEEGRKLFHSMSS 144
+ VE+G K+F+ MS
Sbjct: 338 FCKSKRVEDGMKIFYEMSQ 356
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFN-----GLKEKDTASWTSIICGLAMNGKTNKALEL 103
D V T+L+ Y +E ++ +F+ G K + ++T++I L N N A+EL
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP-NVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 104 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 163
F M T G++P+ VT+ A+++ G + L M ++PN+ + ID
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAFV 269
Query: 164 RAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
+ G L EA+EL + + V Y +L++ YG +D ++
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G +PD SLL +E + D + + V T LI+ ++ +
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 69 SLEVFNGL----KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
++E+FN + + ++ +++ GL G+ A L M +P+ +TF A++
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID 266
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
A G + E ++L++ M + P++ YG I+ L GLL EA ++
Sbjct: 267 AFVKVGKLMEAKELYNVMIQM-SVYPDVFTYGSLINGLCMYGLLDEARQM 315
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I PD ++ + + C ++G E GR + + + R + DA + LI ++G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
++ E+F +KE+ DT ++ +I G GK NKA +L E M+T G +P VT+ +
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA----EELVRK 177
V+ + ++E LF S ++ N+ Y ID G+ G + EA EEL++K
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 35 RWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKD----TASWTSIICG 90
++ H+ + N + D V T++I + ++ +++++E+F L++ T ++ ++I G
Sbjct: 259 KFFHE-IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 91 LAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKP 150
GK ++A L E G+ P + + +L+ G V+E K+F M P
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK--DAAP 375
Query: 151 NLEHYGGFIDLLGRAGLLHEAEEL 174
NL Y ID+L RAG L A EL
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFEL 399
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMET 109
T LI+ +A+ G V+ +L + + +K + D + I GK + A + F +E
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
G KPD+VT+ +++ A ++E ++F + + P Y I G AG
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFD 325
Query: 170 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
EA L+ + + V Y +L+ R G +D
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 77/173 (44%), Gaps = 5/173 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G +P S++ A+ L+ + + RI ++ V+ ++LI + + G ++++
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ L +K + +W S++ L + N+AL F++M+ L P+ VT+ +++
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ + M MKP+ Y I L +AG + EA L +
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 40/226 (17%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+PD+ SLL C++ G E R + D + RI D L+ + G ++ +
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF--------------------- 104
E+ + K + S++++I G A G+ ++AL LF
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 105 --------------EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKP 150
M ++G K D VT+ A+L G +E +K+F M H+ P
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLP 512
Query: 151 NLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 196
NL Y ID + GL EA E+ R+ V LY AL+ A
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL-ELFEAME 108
+ALI Y +SG E+++ VFN +KE + ++ ++I G K + + F+ M+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
G +PD +TF ++L+ CS GL E R LF M++ ++ ++ Y +D + + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQM 390
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVK-XXXXXXXXXX 227
A E++ ++P + V Y ++ G D L + +
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 228 XXIYASADRWEDVNKVRSKMKDLGIKK 254
IY R E+ + +M +GIKK
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKK 477
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 42 NENRIMVDAVVGTALIKMYAQSGCVEKSLEV-FNGLKEKDTASWTSIICGLAMNGKTNKA 100
NE + A++ T + Y + ++ E F G +++++I +G +A
Sbjct: 230 NEQGKLASAMIST--LGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEA 287
Query: 101 LELFEAMETLGAKPDDVTFIAVLSACSHAGL-VEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
+ +F +M+ G +P+ VT+ AV+ AC G+ ++ K F M ++P+ + +
Sbjct: 288 ISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLL 346
Query: 160 DLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTNVKXX 219
+ R GL A L ++ ++ E V Y LL A G +D+ + + VK
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP-VKRI 405
Query: 220 XXXXXXXXXXI--YASADRWEDVNKVRSKMKDLGI 252
I +A A R+++ + +M+ LGI
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 15/214 (7%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G+ D+ +LL+ + G E I + I D V AL+ Y + G ++
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 69 SLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+VF +K + + +++++I G + G +A+E+F ++ G + D V + A++
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
A GLV L M+ + PN+ Y ID GR+ + + D ++
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSA-------DYSNG 609
Query: 185 IIVPLYRALLSA-CRTYGN--IDMGERLATTLTN 215
+P + LSA T GN I + +L T N
Sbjct: 610 GSLPFSSSALSALTETEGNRVIQLFGQLTTESNN 643
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + +L+TCC + + + + + D V AL+ +Y +S +++
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 70 LEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++V N + ++ S+I A +G ++A+EL M G KPD T+ +LS
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 170
AG VE +F M + KPN+ + FI + G G E
Sbjct: 394 FERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTE 437
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 47 MVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALE 102
M+D V +I M + G V + +FNGL+E D S+TS+I A +G+ +A+
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 103 LFEAMETLGAKPDDVTFIAVLSACSHAGLV-EEGRKLFHSMSSTYHMKPNLEHYGGFIDL 161
+F+ ME G KP +T+ +L+ G + L M S + P+ Y I
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITC 288
Query: 162 LGRAGLLHEAEELVRKL 178
R L EA ++ ++
Sbjct: 289 CKRGSLHQEAAQVFEEM 305
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
Query: 21 LLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK--- 77
L++ CA S +E R + V E+ + D + T LI A+SG V+ EVF+ +
Sbjct: 473 LMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSG 532
Query: 78 -EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGR 136
E + ++ ++I G A G+ KA + + + KPD V F A++SAC +G V+
Sbjct: 533 VEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAF 592
Query: 137 KLFHSMSSTYH-MKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLS 195
+ M + H + P+ G + AG + A+E+ + + +Y ++
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 196 ACRTYGNIDMG 206
+C G+ D
Sbjct: 653 SCSKSGDWDFA 663
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+ + +L+ CA++G + + + + D VV ALI QSG V+++
Sbjct: 532 GVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRA 591
Query: 70 LEVFNGLK------EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+V +K + D S +++ G+ +A E+++ + G + + +
Sbjct: 592 FDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAV 651
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
++CS +G + ++ M + P+ + ID+ G A +L EA +++ Q
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEK-DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGI 710
Query: 184 EIIVPLYRALLSAC 197
+ Y +L+ AC
Sbjct: 711 RLGTISYSSLMGAC 724
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD ++++C Q+G + + ++ D V A+I Y ++G V+ +
Sbjct: 205 GIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMA 264
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
L +++ + + D +++++I ++G + L ++E M+ LG KP+ V + ++ +
Sbjct: 265 LSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDS 324
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
A + + ++ + T PN Y + GRA +A + R++ ++ +
Sbjct: 325 MGRAKRPWQAKIIYKDLI-TNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSL 383
Query: 186 IVPLYRALLSACRTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI--YASADRWEDVNKV 243
V LY LLS C +D + + N + I YA + R +
Sbjct: 384 TVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAA 443
Query: 244 RSKMKDLGIK 253
+M++ G +
Sbjct: 444 LLQMREAGFE 453
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 41/197 (20%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 104
+ ++ +K++ +S +EKS ++F+ + E+ D A++T+II NG +A+E F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 105 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF---------------------HSMS 143
E M + G +PD+VT A++ A AG V+ L+ + +S
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 144 STYH-------------MKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLY 190
Y +KPNL Y ID +GRA +A+ + + D P +
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK---DLITNGFTPNW 350
Query: 191 RALLSACRTYGNIDMGE 207
+ R YG G+
Sbjct: 351 STYAALVRAYGRARYGD 367
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD + +L+ ++G L R I D + + D + T LI + + G VE +
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 70 LEVF-----NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
LE+ NG+ E D +++++CG+ G+ A M G KPDDVT+ ++
Sbjct: 435 LEIRKEMDQNGI-ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 175
A G + G KL M S H+ P++ Y ++ L + G + A+ L+
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLL 543
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLK-- 77
+L+ ++ +E G + +++ ++ + V LI+ + Q+G V+K+ E F+ +
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 78 --EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEG 135
D ++ ++ GL NG+ KAL +FE M+ D VT+ V+ G VEE
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 136 RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
LF S+S +KP++ Y + L GLLHE E L K+ +
Sbjct: 455 WSLFCSLS-LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 10 GVKPDKFIVVSLLT-CCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++P+ +L+ C S + R + D + + +I + + +AL+ + ++G V +
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLE 278
Query: 69 SLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ E+F + + D +++S+I GL ++ + ++A ++F+ M + G D V++ +++
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
A VE+G KLF MS + N Y I +AG + +A+E ++
Sbjct: 339 GFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 27 QSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTA 82
Q+G ++ + ++ I D L+ +G +EK+L +F ++++ D
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 83 SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSM 142
++T++I G+ GK +A LF ++ G KPD VT+ ++S GL+ E L+ M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 143 SSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
MK + G I L + EL++K+
Sbjct: 497 KQEGLMKNDCTLSDGDITL---------SAELIKKM 523
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 5/208 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
L ++GV D + L+ C QS + + D V T+LI +
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 66 VEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+E+++ + N + E D +T+II L NG N AL LF+ ME G +PD V + +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+++ ++G + L M+ +KP++ + ID + G +AEEL ++
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 182 TDEIIVPLYRALLSACRTYGNIDMGERL 209
+ + Y +L++ G +D ++
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQM 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD + SL+ SG + + + +I D + ALI + + G +
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 70 LEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E++N + A ++TS+I G M G ++A ++F MET G PD V + ++++
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
V++ K+F+ MS + N Y I G+ G + A+E+ + +
Sbjct: 327 FCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 186 IVPLYRALLSACRTYG 201
+ Y LL C Y
Sbjct: 386 NIRTYNVLLH-CLCYN 400
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKEKDTAS-----WTS--IICGLAMNGKTNKALELFEA 106
L+ +G V+K+L +F +++++ WT ++ GL NGK KAL +FE
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 107 METLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 166
M +T+ ++ AG V+ LF S+ S +KPN+ Y I L R G
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREG 509
Query: 167 LLHEAEELVRKLPD 180
L HEA L RK+ +
Sbjct: 510 LKHEAHVLFRKMKE 523
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 52 VGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNG--KTNKALELFE 105
V A++ +Y++SG K+ E+ + ++++ D S+ ++I +G N A+EL +
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 106 AMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA 165
+ G +PD +T+ +LSACS ++ K+F M + + +P+L Y I + GR
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEA-HRCQPDLWTYNAMISVYGRC 345
Query: 166 GLLHEAEELVRKL 178
GL EAE L +L
Sbjct: 346 GLAAEAERLFMEL 358
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++PD +LL+ C++ L+ + + + +R D A+I +Y + G ++
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+F L+ K D ++ S++ A T K E+++ M+ +G D++T+ ++
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
G ++ +L+ M P+ Y ID LG+A EA L+ ++ D +
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 186 IVPLYRALL 194
+ Y AL+
Sbjct: 472 TLQTYSALI 480
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD + ++++ + G + + DAV +L+ +A+ EK E
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 72 VFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETL-GAKPDDVTFIAVLSAC 126
V+ +++ KD ++ +II G+ + AL+L++ M+ L G PD +T+ ++ +
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEE 173
A E L M +KP L+ Y I +AG EAE+
Sbjct: 449 GKANRTVEAAALMSEMLDV-GIKPTLQTYSALICGYAKAGKREEAED 494
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTASWTS-----IICGLAMNGKTNKALEL 103
D +L+ YAQ GC E++ +FN + +D S T ++ L ++G+ + +
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMM-RDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 104 FEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLG 163
E ++ +G K + + +L A + AG + E +K++ SM + ++ P + Y I+LL
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL-PTIRLYRMMIELLC 903
Query: 164 RAGLLHEAEELVRKLPDQTDEIIVPLYRALL 194
+ + +AE +V ++ + ++ + ++ ++L
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
+ A W S++ K +++++ ++ G +PD+ T+ ++ EEG L
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLM 985
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRT 199
M + + P L+ Y I G+ L +AE+L +L + ++ Y ++ R
Sbjct: 986 QQMRN-LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRD 1044
Query: 200 YGNIDMGERLATTLTNVKXXXXXXXXXXXXI-YASADRWEDVNKVRSKMKDLGIK 253
G+ E+L + N + Y+S+ ++ KV S +KD ++
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+K D+F ++L+ CA+ G L + + V AL++++ ++G ++
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
L V ++E D+ ++ ++ G + +A + E M G P+ +T+ V+ A
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
AG +E KLF+SM + PN Y + LLG+ + E+++ L D
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKS---RSNEMIKMLCDMKSNG 451
Query: 186 IVP---LYRALLSACRTYG 201
P + +L+ C G
Sbjct: 452 CSPNRATWNTMLALCGNKG 470
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVF 73
D L+ ++G + + + + + +M +A+ T +I Y ++G +++L++F
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 74 NGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHA 129
+KE +T ++ +++ L ++N+ +++ M++ G P+ T+ +L+ C +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 130 GLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPL 189
G+ + ++F M S +P+ + + I GR G +A ++ ++ V
Sbjct: 470 GMDKFVNRVFREMKSC-GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 190 YRALLSACRTYGNIDMGERLATTL 213
Y ALL+A G+ GE + + +
Sbjct: 529 YNALLNALARKGDWRSGENVISDM 552
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 39 DYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMN 94
D + ++D T ++ Y+++G EK++++F +KE + ++ I+
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 95 GKT-NKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLE 153
G++ K L + + M + G K D+ T VLSAC+ GL+ E ++ F + S + +P
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY-EPGTV 317
Query: 154 HYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSA 196
Y + + G+AG+ EA +++++ + + Y L++A
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD + L+ +E D N ++ D + +I ++ E+
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 70 LEVFNGLKEKD----TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E F+ + K+ T + +I +G+ + ALEL E M+ G P+ T+ +++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
S VEE + LF M ++PN+ HY ID G+ G + + E L+R++ +
Sbjct: 690 MSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
Y ++ GN+ RL
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRL 772
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL--EVFNGLK 77
+LL ++G L+ I + ++D V LI SGC K E F L
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI-----SGCCGKKKLDEAFMFLD 564
Query: 78 E-------KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
E D +++ +ICGL K +A++ ++ + G PD T+ ++ C A
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
EEG++ F M S +++PN Y I R+G L A EL
Sbjct: 625 RTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD + L+ +E D N ++ D + +I ++ E+
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 70 LEVFNGLKEKD----TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E F+ + K+ T + +I +G+ + ALEL E M+ G P+ T+ +++
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
S VEE + LF M ++PN+ HY ID G+ G + + E L+R++ +
Sbjct: 690 MSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
Y ++ GN+ RL
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRL 772
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 20 SLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL--EVFNGLK 77
+LL ++G L+ I + ++D V LI SGC K E F L
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI-----SGCCGKKKLDEAFMFLD 564
Query: 78 E-------KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
E D +++ +ICGL K +A++ ++ + G PD T+ ++ C A
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
EEG++ F M S +++PN Y I R+G L A EL
Sbjct: 625 RTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALEL 667
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHG-RWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G+K D SL+ G + G + + + + N I+ D V +ALI ++ + G + +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN-IIPDVVTFSALIDVFVKEGKLLE 333
Query: 69 SLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ E++N + + DT ++ S+I G ++A ++F+ M + G +PD VT+ +++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ A V++G +LF +SS + PN Y + ++G L+ A+EL +++
Sbjct: 394 SYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 38/214 (17%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G+ PD SL+ + L + D + D V + LI Y ++
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
V+ + +F + K +T ++ +++ G +GK N A ELF+ M + G P VT+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 122 VLSACSHAGLVEEGRKLFHSMSST--------YHM------------------------- 148
+L G + + ++F M + Y++
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 149 -KPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
KP++ Y I L + G L EA+ L RK+ +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 104
D + + L+ + G V +++ + + + E D + +++I GL + G+ ++AL L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 105 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 164
+ M G +PD+VT+ VL+ +G LF M ++K ++ Y ID L +
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCK 257
Query: 165 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
G +A L ++ + + V Y +L+ G D G ++
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G P+ +L +S ++ G + D + + + + V LIK Y Q+G
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 66 VEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
++ +L VF NGL + S+ ++ GL NG+ KAL FE M+ D +T+
Sbjct: 239 IDLALGVFGYMTSNGLIP-NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 176
++ A +V+E LF+ + ++P+ + Y I L RAG+ EA+ L R
Sbjct: 298 IMIHGMCKACMVKEAYDLFYKLKFK-RVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 3 MCSLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQ 62
M ++ +G++PD SL+ S +++ ++ + + I D VV T LI +
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 63 SGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVT 118
+ V +LEV +K++ + +++S+I GL +G+ A M++ P+ +T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 119 FIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFI 159
F A++ A + G + + ++ M + PN+ Y I
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQM-SIDPNVFTYSSLI 160
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 5/204 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD SLL + G + + + ++ D V ++++ ++ +SG ++K+
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 70 LEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
L FN +KE D +T +I G G + A+ L M G D VT+ +L
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
++ E KLF+ M+ + P+ ID + G L A EL +K+ ++ +
Sbjct: 455 LCKRKMLGEADKLFNEMTER-ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
V Y LL G+ID + +
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV + + + ++ + G +E V E + D V LI Y+ G +E++
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 70 LEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E+ N + K + ++ ++I GL +GK +A E+F M G PD T+ ++L
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
G V E K+F M S + P+L + + L R+G L +A
Sbjct: 350 ACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKA 394
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRW-IHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++P+ F S+L E W + + +N + + V+ +I + G K
Sbjct: 514 GLEPNNF-TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 69 SLEVFNGL-KEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
+ E+ L KEK S+ SII G G T+ A+E + M G P+ VTF +++
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+ + ++ ++ H M S +K +L YG ID + + A L +LP+
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSM-ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 184 EIIVPLYRALLSACRTYGNIDMGERLATTLTN 215
V +Y +L+S R G +D L + N
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+PD F++ S+L + G I + D LI +Y ++G +E+
Sbjct: 456 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 515
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E+F LKEK D +WTS I + K LE+FE M G PD T +LSA
Sbjct: 516 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Query: 126 CSHAGLVEEGRKLFHSM 142
CS VE+ + +M
Sbjct: 576 CSSEEQVEQVTSVLRTM 592
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD L+ Q + ++ + E+R + LIK Y +G +E++
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 72 VFNGLKEKDTAS-------WTSIICGL-AMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
V ++ + + + I GL G T +A+++F+ M+ KP T+ ++
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+ A KL+ M S + KPN+ Y ++ R GL +AEE+ +L +
Sbjct: 294 NLYGKASKSYMSWKLYCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 184 EIIVPLYRALLSA 196
E V +Y AL+ +
Sbjct: 353 EPDVYVYNALMES 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMET 109
TAL+ +A+ G EK+ E+F L+E D + +++ + G A E+F M+
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
+G +PD ++ ++ A AGL + +F M + P ++ + + +A +
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSAYSKARDVT 443
Query: 170 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 215
+ E +V+++ + E + ++L+ G E++ + N
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
+ ++T+++ A G KA E+FE ++ G +PD + A++ + S AG ++F
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 140 HSMSSTYHM--KPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
M HM +P+ Y +D GRAGL +AE + ++
Sbjct: 380 SLMQ---HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 417
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+PD F++ S+L + G I + D LI +Y ++G +E+
Sbjct: 434 GVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERI 493
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E+F LKEK D +WTS I + K LE+FE M G PD T +LSA
Sbjct: 494 EELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Query: 126 CSHAGLVEEGRKLFHSM 142
CS VE+ + +M
Sbjct: 554 CSSEEQVEQVTSVLRTM 570
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
+PD L+ Q + ++ + E+R + LIK Y +G +E++
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 72 VFNGLKEKDTAS-------WTSIICGL-AMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
V ++ + + + I GL G T +A+++F+ M+ KP T+ ++
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+ A KL+ M S + KPN+ Y ++ R GL +AEE+ +L +
Sbjct: 272 NLYGKASKSYMSWKLYCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 184 EIIVPLYRALLSA 196
E V +Y AL+ +
Sbjct: 331 EPDVYVYNALMES 343
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMET 109
TAL+ +A+ G EK+ E+F L+E D + +++ + G A E+F M+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
+G +PD ++ ++ A AGL + +F M + P ++ + + +A +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRL-GIAPTMKSHMLLLSAYSKARDVT 421
Query: 170 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 215
+ E +V+++ + E + ++L+ G E++ + N
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
+ ++T+++ A G KA E+FE ++ G +PD + A++ + S AG ++F
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 140 HSMSSTYHM--KPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
M HM +P+ Y +D GRAGL +AE + ++
Sbjct: 358 SLMQ---HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 395
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
I KP++ I +++ + G L+ + D + + TALI Y ++G E
Sbjct: 135 IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYET 194
Query: 69 SLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKA-LELFEAMETLGAKPDDVTFIAVL 123
SLE+ + +K + + ++ ++I A G + L LF M G +PD VT+ +L
Sbjct: 195 SLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
SAC+ GL +E +F +M+ + P+L Y ++ G+ L + +L+ ++
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 184 EIIVPLYRALLSACRTYGNI 203
+ Y LL A G+I
Sbjct: 314 LPDITSYNVLLEAYAKSGSI 333
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G PD LL A+SG+++ + + +A + L+ ++ QSG +
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 70 LEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++F +K + D A++ +I G + + LF M +PD T+ ++ A
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
C GL E+ RK+ M++ + P+ + Y G I+ G+A L EA
Sbjct: 432 CGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMET 109
T +I + + G ++K LEVF+ + + + S+T++I NG+ +LEL + M+
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEG-RKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLL 168
P +T+ V++AC+ GL EG LF M ++P++ Y + GL
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGLG 263
Query: 169 HEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTL 213
EAE + R + D IVP T+G + E++ L
Sbjct: 264 DEAEMVFRTMNDGG---IVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 40/207 (19%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++PD ++ C + G E R I Y+ N I+ + T +I+ + Q+ E++L
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 71 EVFNGLKE---------------------------------------KDTASWTSIICGL 91
FN + E ++ ++ + I
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 92 AMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPN 151
GK +A++ + ME PD+ T AVLS S A LV+E R+ F M ++ + P+
Sbjct: 538 KQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKAS-DILPS 596
Query: 152 LEHYGGFIDLLGRAGLLHEAEELVRKL 178
+ Y + + G+ + EL+ ++
Sbjct: 597 IMCYCMMLAVYGKTERWDDVNELLEEM 623
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G PD +L + +E + + + ++ D T ++ + ++G +E++
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 70 LEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ FN ++E + ++T++I K + A ELFE M + G P+ VT+ A++
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 126 CSHAGLVEEGRKLFHSMSSTYHM---------------KPNLEHYGGFIDLLGRAGLLHE 170
AG VE+ ++F M + + +PN+ YG +D ++ + E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 171 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLT 214
A +L+ + + E +Y AL+ G +D + + T ++
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ D + ++ ++G +E R + + E + V TALI Y ++ V +
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAM----------------ET 109
E+F + + + +++++I G G+ KA ++FE M +
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
+P+ VT+ A+L + VEE RKL +MS +PN Y ID L + G L
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLD 691
Query: 170 EAEELVRKLPDQTDEIIVPLYRALL 194
EA+E+ ++ + + Y +L+
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLI 716
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G P SL+ ++ E + + EN V + V +IK + + G + ++
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+++FN +K + D ++ +++ G+ G N+A L ME G + D + +L+
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+ G+ ++F ++ + +KP+ Y + AG+ EA ++R++ D+ E
Sbjct: 559 FARTGVPRRAIEMFETIKHS-GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 186 IVPLYRALLSACRTYGNID 204
Y ++L A GN+D
Sbjct: 618 DAITYSSILDAV---GNVD 633
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIH-DYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
KP S++ Q G E ++ + NE D + +ALI Y + G + ++
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 71 EVFNGLKE---KDTASWTSIICGLAMN-GKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+F+ +K+ + T + + G+ GK KAL+LFE M+ G P T+ ++
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 170
AG V+E + M + P++ +++LG+ G + E
Sbjct: 314 GKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEE 356
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD +L++ + G + + D + +N + + T L+ +Y + G VEK+L++
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 73 FNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
F +K + ++T +I GL G+ ++A ++ M G PD V +++
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLL 162
G VEE +F M + P + Y I L
Sbjct: 351 VGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKAL 383
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 71 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAG 130
E+ N E ++TS++ G GK NKAL L+ M G P TF +LS AG
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 131 LVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP-- 188
L+ + KLF+ M+ +++KPN Y I+ G + +A E ++++ T++ IVP
Sbjct: 522 LIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM---TEKGIVPDT 577
Query: 189 -LYRALL 194
YR L+
Sbjct: 578 YSYRPLI 584
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD + L+ +G + D +++ ++ + T L+ + + G +E++
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
L V + ++ D + +I G + L + M G KPDDV + +++ A
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
S G +E ++ M + + PN Y I+ L +AG ++EAE L K+
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCV-PNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRW-IHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G KPD + SL++ + ++H W + D ++E ++ + V LI + + G +++
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGEIKE 547
Query: 69 SLEVFNGL----KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ ++ N + D ++ S+I GL G+ +KA LFE M G P +++ +++
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+G+VEE + F P++ + I+ L RAG + + + RKL
Sbjct: 608 GLCRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 6/207 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWI-HDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
KP+ I +L+ G L+ + + D V I+ D +LI Y + G V +L
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 71 EVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
EV + ++ K + S+T ++ G GK ++A + M G KP+ V F ++SA
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
+ E ++F M KP++ + I L + A L+R + +
Sbjct: 470 CKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 187 VPLYRALLSACRTYGNIDMGERLATTL 213
Y L++A G I +L +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEM 555
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KP+ +I S++ + L + I+ D VV T LI + + G + +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 70 LEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ F + +D ++T+II G G +A +LF M G +PD VTF +++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
AG +++ ++ + M PN+ Y ID L + G L A EL+ ++ +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
+ Y ++++ GNI+ +L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGAL-EHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+ PD ++++ Q G + E G+ H+ + + D+V T LI Y ++G ++ +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDA 440
Query: 70 LEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V N + + + ++T++I GL G + A EL M +G +P+ T+ ++++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+G +EE KL + + + Y +D ++G + +A+E+++++ + +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
+ + L++ +G ++ GE+L
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKL 583
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KP+ +I S++ + L + I+ D VV T LI + + G + +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 70 LEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
+ F + +D ++T+II G G +A +LF M G +PD VTF +++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
AG +++ ++ + M PN+ Y ID L + G L A EL+ ++ +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
+ Y ++++ GNI+ +L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGAL-EHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
+ PD ++++ Q G + E G+ H+ + + D+V T LI Y ++G ++ +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDA 440
Query: 70 LEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
V N + + + ++T++I GL G + A EL M +G +P+ T+ ++++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
+G +EE KL + + + Y +D ++G + +A+E+++++ + +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 186 IVPLYRALLSACRTYGNIDMGERL 209
+ + L++ +G ++ GE+L
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKL 583
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +G KPD + +L+ SG + D + E +AV ++ + +SG
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
++E+ ++E+ D ++ II GL +G + A LF ME G + +T+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
++ +AG ++G KL M + PN+ + ID + G L EAEEL +++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
E +T +++++I GL + G+ ++ALEL + M +G KPD +T +++ +G E
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 197
L M Y +PN YG ++++ ++G A EL+RK+ ++ ++ Y ++
Sbjct: 215 LIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 198 RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI--YASADRWEDVNKVRSKM 247
+G++D L + +K I + +A RW+D K+ M
Sbjct: 274 CKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 46 IMVDAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 101
++ D V LI+ + + G + + E+F + + + ++ ++ GL NG++ KAL
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 102 ELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDL 161
E+FE +E + D + ++ +A V++ LF S+ +KP ++ Y I
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPGVKTYNIMIGG 552
Query: 162 LGRAGLLHEAEELVRKLPDQ 181
L + G L EAE L RK+ +
Sbjct: 553 LCKKGPLSEAELLFRKMEED 572
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+ PD SL+ + L+ + D + + LI Y ++ ++
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
LE+F + + DT ++ ++I G GK N A ELF+ M + P+ VT+ +L
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
G E+ ++F + + M+ ++ Y I + A + +A +L LP
Sbjct: 483 LCDNGESEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G +PD +L+ G + + D + EN D V +++ +SG
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 69 SLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+L++ ++E+ D ++++II L +G + A+ LF+ MET G K VT+ +++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
AG +G L M S + PN+ + +D+ + G L EA EL +++
Sbjct: 272 GLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD SL+ ++ G + +++ ++ +AV + L++ + QSG ++ + E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 73 FNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
F + D ++ ++ GL NGK KALE+FE ++ V + ++
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVP 188
G VE+ LF S+ +KPN+ Y I L + G L EA L+RK+ + +
Sbjct: 486 GGKVEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 189 LYRALLSA 196
Y L+ A
Sbjct: 545 TYNTLIRA 552
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 5/195 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G+ P+ +L+ L + D + N+ D V T+LIK Y
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
V+ ++VF + ++ + +++ ++ G +GK A ELF+ M + G PD +T+
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+L G +E+ ++F + + M + Y I+ + + G + +A L LP +
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 182 TDEIIVPLYRALLSA 196
+ V Y ++S
Sbjct: 503 GVKPNVMTYTVMISG 517
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
E DT ++ ++I GL + GK ++A+ L + M G +PD VT+ ++++ +G
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALL 194
L M ++K ++ Y ID L R G + A L +++ + + V Y +L+
Sbjct: 215 LLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+++ G+ P + L+ S ++ R + D + E + L++ Y ++G
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 66 VEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+K LE+ N ++ + + +I+ G+ + + ++ E M G PD VTF +
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHM---KPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+SA G V + ++F M ++ +PN Y + + GLL +A+ L +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 179 PDQTDEIIVPLYRALLSACRTYGNIDMGERLATTLTN 215
+ D + Y L +G E + +T+
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Query: 12 KPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLE 71
KP ++ LL C + +E W++ + I LI+ S CV+ + E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 72 VFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+F+ + EK + ++ ++ G G T+K LEL AME+ G P+ V + ++S+
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
G ++ K+ M + P++ + I L + G + +A + +
Sbjct: 229 REGRNDDSEKMVEKMREE-GLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD +L+ +S +E G + ++ ++ D V T LI+ G + + +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 73 FNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
F + D +++ ++ GL NGK KALE+F+ M+ K D + ++
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
AG V++G LF S+ S +KPN+ Y I L LL EA L++K+ +
Sbjct: 518 AGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I + PD F SL+ L+ + + +++ D V LIK + +S
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
VE E+F + + DT ++T++I GL +G + A ++F+ M + G PD +T+
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+L + G +E+ ++F M + +K ++ Y I+ + +AG + + +L L +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 182 TDEIIVPLYRALLSA 196
+ V Y ++S
Sbjct: 535 GVKPNVVTYNTMISG 549
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTA--------- 55
++ +G +PD +L+ HG ++H+ +E +VD +V
Sbjct: 180 QMVEMGYRPDTITFTTLI----------HGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 56 -LIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETL 110
++ + G + +L + N ++ E D + +II L + AL LF+ MET
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 111 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 170
G +P+ VT+ +++S G + +L M + PNL + ID + G E
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVE 348
Query: 171 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
AE+L + ++ + + Y +L++ + +D +++
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++P+ SL++C G + + E +I + V ALI + + G ++
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++++ + ++ D ++ S++ G M+ + +KA ++FE M + PD VT+ ++
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 126 CSHAGLVEEGRKLFHSMS 143
+ VE+G +LF MS
Sbjct: 410 FCKSKRVEDGTELFREMS 427
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD LL +G LE + DY+ ++ I +D + T +I+ ++G V+
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++F L K + ++ ++I GL +A L + M+ G P+ T+ ++ A
Sbjct: 525 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Query: 126 -------CSHAGLVEEGRKL-FHSMSSTYHMKPNLEHYG----GFIDLL 162
+ A L+ E R F +ST + N+ H G F+D+L
Sbjct: 585 HLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 10 GVKPDKFIVVSLLTCCAQSGAL-EHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++PD F SL++C G + R + D + E +I + V +ALI + + G + +
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 69 SLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ ++++ + ++ D +++S+I G M+ + ++A +FE M + P+ VT+ ++
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 125 ACSHAGLVEEGRKLFHSMSS 144
A VEEG +LF MS
Sbjct: 407 GFCKAKRVEEGMELFREMSQ 426
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 27/215 (12%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVV-----------G 53
++ +G KPD F +L+ HG ++H+ +E +VD +V G
Sbjct: 178 QMVEMGYKPDTFTFTTLI----------HGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 54 TALIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMET 109
T ++ + G ++ +L + ++ E D + +II GL + AL LF M+
Sbjct: 228 T-VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
G +PD T+ +++S + G + +L M + PN+ + ID + G L
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLV 345
Query: 170 EAEELVRKLPDQTDEIIVPLYRALLSACRTYGNID 204
EAE+L ++ ++ + + Y +L++ + +D
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 40/214 (18%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I + PD F SL+ L+ + + + + + V + LIK + ++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 66 VEKSLEVFNGLKEK----DTASWTSII--------C------------------------ 89
VE+ +E+F + ++ +T ++T++I C
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 90 ---GLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTY 146
GL NGK KA+ +FE ++ +PD T+ ++ AG VE+G +LF ++ S
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLK 532
Query: 147 HMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
+ PN+ Y I R G EA+ L++K+ +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 10 GVKPDKFIVVSLLT--CCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
G KPD F+ +++ C G+ G ++ + E + D + LI +++G VE
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVG--VYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 68 KSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
++ + E DTA++TS++ G+ G++ AL L E ME G P+D T+ +L
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
A L+++G +L+ M S+ +K Y + L ++G + EA E+
Sbjct: 378 HGLCKARLMDKGMELYEMMKSS-GVKLESNGYATLVRSLVKSGKVAEAYEV 427
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 5/199 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G + DK ++++ C ++ ++E I V + +I + G + +
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
VF + K + A +T +I G A +G A+ L M G KPD VT+ V++
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEI 185
G VEE FH+ + N Y ID LG+AG + EAE L ++ ++
Sbjct: 407 LCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 186 IVPLYRALLSACRTYGNID 204
Y AL+ A + +D
Sbjct: 466 DSYCYNALIDAFTKHRKVD 484
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHG-RWIHDYVNENRIMVDAVVGTALIKMYAQS 63
++I G KP+ I L+ A+SG++E R +H ++E D V + ++ ++
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGLCKN 410
Query: 64 GCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
G VE++L+ F+ + ++ ++S+I GL G+ ++A LFE M G D +
Sbjct: 411 GRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCY 470
Query: 120 IAVLSACSHAGLVEEGRKLFHSM 142
A++ A + V+E LF M
Sbjct: 471 NALIDAFTKHRKVDEAIALFKRM 493
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRW-----IHDYVNENRIMVDAVVGTALIKMYAQSG 64
G+ PD SL+ SG GRW + + + I D ALI + G
Sbjct: 216 GIGPDVVTYNSLI-----SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 65 CVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFI 120
V ++ E + + + D +++ +I GL M + ++A E+F M + G PD VT+
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 121 AVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
+++ + VE G KLF MS ++ N Y I RAG L+ AEE+ R++
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G PD L+ +S +EHG + +++ ++ + V T LI+ Y ++G + +
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 70 LEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
E+F + + ++ ++ GL NGK KAL + M+ G D VT+ ++
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRG 440
Query: 126 CSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
AG V + ++ S++ M P++ Y + L + GL EA+ L RK+ +
Sbjct: 441 MCKAGEVADAWDIYCSLNCQGLM-PDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
Query: 10 GVKPDKFIVVSLLTCCAQSGAL-EHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
G++P+ SL+ C G + R + D + E +I + V +ALI + + G + +
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 69 SLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ ++++ + ++ D +++S+I G M+ + ++A +FE M + P+ VT+ ++
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
A VEEG +LF MS + N Y I L +AG A+++ +K+
Sbjct: 404 GFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 185 IIVPLYRALLSACRTYGNID 204
+ Y LL YG ++
Sbjct: 463 PDIITYSILLDGLCKYGKLE 482
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I + PD F SL+ L+ + + + + + V LIK + ++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
VE+ +E+F + ++ +T ++ ++I GL G + A ++F+ M + G PD +T+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+L G +E+ +F + + M+P++ Y I+ + +AG + + +L L +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 182 TDEIIVPLYRALLSA-CR 198
+ V +Y ++S CR
Sbjct: 530 GVKPNVIIYTTMISGFCR 547
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
P+ +L+ ++ +E G + +++ ++ + V LI+ Q+G + + ++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 73 FNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
F + D +++ ++ GL GK KAL +FE ++ +PD T+ ++
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
AG VE+G LF S+S +KPN+ Y I R GL EA+ L R++ +
Sbjct: 513 AGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 14 DKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGT----------ALIKMYAQS 63
D+ V+ L HG ++H+ +E ++D +V ++ +
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 64 GCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
G ++ +L + ++ E D +T+II L N AL LF M+ G +P+ VT+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 120 IAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLP 179
+++ + G + +L M + PN+ + ID + G L EAE+L ++
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 180 DQTDEIIVPLYRALLSACRTYGNID 204
++ + + Y +L++ + +D
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLD 377
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ +G KP + +L+ +G + + D + E + V ++ + +SG
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
++E+ ++E+ D ++ II GL +G + A LF ME G K D +T+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
++ +AG ++G KL M + PN+ + ID + G L EA++L++++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 78 EKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRK 137
E DT + +++ GL + + ++ALEL + M +G KP +T +++ G V +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 138 LFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEIIVPLYRALLSAC 197
L M T +PN YG ++++ ++G A EL+RK+ ++ ++ Y ++
Sbjct: 215 LIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 198 RTYGNIDMGERLATTLTNVKXXXXXXXXXXXXI--YASADRWEDVNKVRSKM 247
G++D L + +K I + +A RW+D K+ M
Sbjct: 274 CKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G PD L+ ++ ++ G + ++ ++ + V L++ + QSG
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
+E + ++F + + D S+ ++ GL NG+ KALE+F +E + D ++
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
++ +A V++ LF S+ +K + Y I L R L +A+ L RK+ ++
Sbjct: 514 IIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 13 PDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSLEV 72
PD +L+ +S +E G + ++ ++ D V T LI+ G + + +V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 73 FNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSH 128
F + D +++ ++ GL NGK KALE+F+ M+ K D + ++
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 129 AGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
AG V++G LF S+ S +KPN+ Y I L LL EA L++K+ +
Sbjct: 443 AGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I + PD F SL+ L+ + + +++ D LIK + +S
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 66 VEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
VE E+F + + DT ++T++I GL +G + A ++F+ M + G PD +T+
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
+L + G +E+ ++F M + +K ++ Y I+ + +AG + + +L L +
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 182 TDEIIVPLYRALLSA 196
+ V Y ++S
Sbjct: 460 GVKPNVVTYNTMISG 474
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTA--------- 55
++ +G +PD +L+ HG ++H+ +E +VD +V
Sbjct: 105 QMVEMGYRPDTITFTTLI----------HGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 56 -LIKMYAQSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMETL 110
++ + G ++ + + N ++ E D + +II L + AL LF+ MET
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 111 GAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHE 170
G +P+ VT+ +++S G + +L M + PNL + ID + G E
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVE 273
Query: 171 AEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
AE+L + ++ + + Y +L++ + +D +++
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G++P+ SL++C G + + E +I + V ALI + + G ++
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++ + + ++ D ++ S+I G M+ + +KA ++FE M + PD T+ ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 126 CSHAGLVEEGRKLFHSMS 143
+ VE+G +LF MS
Sbjct: 335 FCKSKRVEDGTELFREMS 352
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV PD LL +G LE + DY+ ++ I +D + T +I+ ++G V+
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 70 LEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSA 125
++F L K + ++ ++I GL +A L + M+ G PD T+ ++ A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 126 -------CSHAGLVEEGRKL-FHSMSSTYHMKPNLEHYG----GFIDLL 162
+ A L+ E R F +ST + N+ H G F+D+L
Sbjct: 510 HLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 558
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 10 GVKPDKFIVVSLLT--CCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVE 67
GV+ D SL+ CC+ + + R + D V + I+ + + TA+I ++ + G
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWS-DAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFS 261
Query: 68 KSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVL 123
++++++ + + D ++ S+I GL M+G+ ++A ++ + M T G PD VT+ ++
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 124 SACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTD 183
+ + V+EG KLF M+ + + Y I +AG A+E+ ++ + +
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQGYFQAGRPDAAQEIFSRMDSRPN 380
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
++ G PD +L+ +S ++ G + + + ++ D + +I+ Y Q+G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 66 VEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + E+F+ + + + +++ ++ GL MN + KAL LFE M+ + D T+ V+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPD 180
G VE+ LF S+S +KP++ Y I R +++ L RK+ +
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 104
D V ++LI + Q V ++++ + ++E D + +II G G N A+ELF
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 105 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 164
+ ME G + D VT+ ++++ +G + +L M + PN+ + ID+ +
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVK 256
Query: 165 AGLLHEAEELVRKLPDQTDEIIVPLYRALLSACRTYGNIDMGERL 209
G EA +L ++ + + V Y +L++ +G +D +++
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 7/189 (3%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+GV P+ F+ SL+ ++ + D + E + D V + L+ ++ G +++
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKR 619
Query: 69 SLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
E++ + E D +++ + G A G+ KA ++ M G +P+ V + ++S
Sbjct: 620 CEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDE 184
AG +++ +++ M + PNL Y I G A +AEEL++ D +
Sbjct: 680 GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLK---DMEGK 736
Query: 185 IIVPLYRAL 193
+VP + +
Sbjct: 737 NVVPTRKTM 745
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMET 109
T L+ + G +++ +FN L E+ ++T+++ L + L L +E
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 110 LGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLH 169
G KPD + F A+++A S +G +++ K+F M + KP + I G+ G L
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLE 441
Query: 170 EAEELVRKLPDQTDEIIVP 188
E+ L+ + DE++ P
Sbjct: 442 ESSRLLDMM--LRDEMLQP 458
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 5 SLIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
+LI G KP +L+T + + V +N + D ++ A+I ++SG
Sbjct: 344 TLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 403
Query: 65 CVEKSLEVFNGLKE---KDTAS-WTSIICGLAMNGKTNKALELFEAM---ETLGAKPDDV 117
+++++++F +KE K TAS + ++I G GK ++ L + M E L +P+D
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML--QPNDR 461
Query: 118 TFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELV 175
T ++ A + +EE + + M S Y +KP++ + R G AE+++
Sbjct: 462 TCNILVQAWCNQRKIEEAWNIVYKMQS-YGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
G+KPD + +++ ++SG L+ I + + E+ A LIK Y + G +E+S
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 70 LEVFNGLKEKDTASWTSIICGLAMNG-----KTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ + + + C + + K +A + M++ G KPD VTF +
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 125 ACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEA 171
A + G + +KPN+ G ++ G + EA
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 54 TALIKMYAQSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAME- 108
+LI+ Y +G ++S+++F +K+ ++ S++ L G+T A +LF+ M
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 109 TLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAG 166
T G PD TF +++ +V+E ++F M YH P++ Y ID L RAG
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM-ELYHCNPDVVTYNTIIDGLCRAG 258
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 9 IGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEK 68
+G+ P +L+ +++G LE ++ D + + D V T +I Y SG ++K
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 69 SLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLS 124
+ E+F + K + ++ S+I GL M G+ +A L + ME+ G P+ V + ++S
Sbjct: 378 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVS 437
Query: 125 ACSHAGLVEEGRKLFHSM---SSTYHMKPNLEHY 155
AG + E RK+ M H+ P + Y
Sbjct: 438 YLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 80 DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLF 139
D +T +I G ++G+ +KA E+F M G P+ T+ +++ AG E L
Sbjct: 358 DVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Query: 140 HSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKL 178
M S PN Y + L +AG L EA +++R++
Sbjct: 418 KEMESR-GCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 10 GVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKS 69
GV+ + ++ SL+ ++ G LE R ++D + ++ D +++ + A G V ++
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 70 LEVFNGLKEK---DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSAC 126
+FN L+EK D S+ +++ G ++A+E+ E M G D +F V++
Sbjct: 710 ESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 127 SHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQTDEII 186
+ G + E +LFH M + + + LL + G+ EA ++ ++ +
Sbjct: 770 AADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLA 829
Query: 187 VPLYRA-LLSACRTYG 201
P A L SA Y
Sbjct: 830 TPAITATLFSAMGLYA 845
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 49 DAVVGTALIKMYAQSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELF 104
D + +IK Y ++ EK+L +F G+K + D ++ S+ LA ++A +
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 105 EAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGR 164
M G KP T+ A++++ GL+ + L+ +M T +KPN YG I+
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKT-GVKPNEVVYGSLINGFAE 632
Query: 165 AGLLHEAEELVRKLPD---QTDEIIVPLYRALLSACRTYGNIDMGERL 209
+G++ EA + R + + Q++ I++ +L+ A G ++ R+
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVL---TSLIKAYSKVGCLEEARRV 677
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 40 YVNE----------NRIMVDAVVGT----ALIKMYAQSGCVEKSLEVFNGLK-----EKD 80
YVNE R +D V+ + A+I +YA+ G ++ VF G + D
Sbjct: 455 YVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 81 TASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACSHAGLVEEGRKLFH 140
+ +I KAL LF+ M+ G PD+ T+ ++ + LV+E +++
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 141 SMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEEL 174
M + KP + Y I R GLL +A +L
Sbjct: 575 EMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDL 607
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 11 VKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGCVEKSL 70
++P+ F+V L+ A + ++ + D + + + D V L+ ++G V+++
Sbjct: 165 IEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 71 EVFNGLKEK---DTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIAVLSACS 127
+VF ++EK + +TS++ G GK +A E+ M+ G +PD V F +LS +
Sbjct: 223 KVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 128 HAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRA-GLLHEAEELVRKLPDQTDEII 186
HAG + + L + M +PN+ Y I L R + EA + ++ E
Sbjct: 283 HAGKMADAYDLMNDMRKR-GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 187 VPLYRALLSACRTYGNIDMG 206
+ Y AL+S +G ID G
Sbjct: 342 IVTYTALISGFCKWGMIDKG 361
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 6 LIVIGVKPDKFIVVSLLT-CCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSG 64
LI G KPD +L+ C S E ++ VNE + D+ LI Y + G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG-LEPDSYTYNTLIAGYCKGG 335
Query: 65 CVEKSLE-----VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTF 119
V+ + VFNG D ++ S+I GL G+TN+AL LF G KP+ + +
Sbjct: 336 MVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 120 IAVLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVR 176
++ S+ G++ E +L + MS + P ++ + ++ L + G + +A+ LV+
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 6/209 (2%)
Query: 6 LIVIGVKPDKFIVVSLLTCCAQSGALEHGRWIHDYVNENRIMVDAVVGTALIKMYAQSGC 65
+I G PD F L+ + +E+ I D + +N + D +L+ ++
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 66 VEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMETLGAKPDDVTFIA 121
E +E + + EK A ++ ++ L K ++AL L E M+ PD VTF
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 122 VLSACSHAGLVEEGRKLFHSMSSTYHMKPNLEHYGGFIDLLGRAGLLHEAEELVRKLPDQ 181
++ G ++ LF M Y + + Y I + AE+L +++ D+
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 182 TDEIIVPLYRALLSA-CRTYGNIDMGERL 209
YR ++ C+T GN+++G +
Sbjct: 632 CLGPDGYTYRLMVDGFCKT-GNVNLGYKF 659