Miyakogusa Predicted Gene

Lj6g3v0183700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0183700.1 Non Chatacterized Hit- tr|D8SZV7|D8SZV7_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,61.25,3e-16,DUF155,Protein of unknown function DUF155;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Protein of
unkn,gene.g63919.t1.1
         (80 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13610.1 | Symbols:  | Protein of unknown function (DUF155) |...   137   2e-33
AT1G69380.1 | Symbols:  | Protein of unknown function (DUF155) |...   113   3e-26

>AT5G13610.1 | Symbols:  | Protein of unknown function (DUF155) |
           chr5:4383073-4384808 FORWARD LENGTH=402
          Length = 402

 Score =  137 bits (344), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/79 (83%), Positives = 72/79 (91%)

Query: 2   LQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQLV 61
           LQ+L+ DGIRTIG VLGQSIALDYYGRQVDGMVAEFT+INR++E TG F M+RKKLFQLV
Sbjct: 244 LQFLNTDGIRTIGCVLGQSIALDYYGRQVDGMVAEFTEINRQLEITGTFTMKRKKLFQLV 303

Query: 62  GKANSNLADVILKLGLFER 80
           GKAN  LADVILKLGLFER
Sbjct: 304 GKANVILADVILKLGLFER 322


>AT1G69380.1 | Symbols:  | Protein of unknown function (DUF155) |
           chr1:26081729-26083431 REVERSE LENGTH=373
          Length = 373

 Score =  113 bits (282), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/80 (71%), Positives = 64/80 (80%)

Query: 1   MLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQRKKLFQL 60
           +L+ LD + IR IGSVLGQSIALDY   QV+ +V EF DINR M  TG F M RKKLFQL
Sbjct: 210 VLKTLDTNSIRIIGSVLGQSIALDYSVSQVNKLVEEFADINRSMAKTGTFTMTRKKLFQL 269

Query: 61  VGKANSNLADVILKLGLFER 80
           VGKANSN+ADVILK+GLFER
Sbjct: 270 VGKANSNIADVILKVGLFER 289