Miyakogusa Predicted Gene
- Lj6g3v0157220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0157220.1 Non Chatacterized Hit- tr|K3YS61|K3YS61_SETIT
Uncharacterized protein OS=Setaria italica GN=Si017105,29.68,5e-19,no
description,WD40/YVTN repeat-like-containing domain; WD40,WD40 repeat;
WD_REPEATS_2,WD40 repeat; ,gene.g63899.t1.1
(234 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-... 104 4e-23
AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-... 104 5e-23
AT5G27570.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 103 8e-23
AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 103 1e-22
AT5G27080.1 | Symbols: | Transducin family protein / WD-40 repe... 102 2e-22
AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repe... 102 3e-22
AT4G22910.1 | Symbols: FZR2, CCS52A1 | FIZZY-related 2 | chr4:12... 96 2e-20
AT4G33260.2 | Symbols: CDC20.2 | Transducin family protein / WD-... 93 2e-19
AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 92 3e-19
AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 | chr5:4468677-447... 92 3e-19
AT4G11920.1 | Symbols: CCS52A2, FZR1 | cell cycle switch protein... 91 8e-19
AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like superf... 53 2e-07
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 50 2e-06
>AT4G33270.1 | Symbols: CDC20.1 | Transducin family protein / WD-40
repeat family protein | chr4:16044545-16046590 REVERSE
LENGTH=457
Length = 457
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 4/86 (4%)
Query: 128 ETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQS 187
+T VC L W+++ +E+LS HGF+ N+L LWKYPSM K+ L H SRVL+++QS
Sbjct: 356 DTGSQVCSLLWSKNERELLSSHGFT----QNQLTLWKYPSMVKMAELTGHTSRVLYMAQS 411
Query: 188 PDGLTVVSAGADESLRFWDVFGPPAT 213
PDG TV SA DE+LRFW+VFG P T
Sbjct: 412 PDGCTVASAAGDETLRFWNVFGVPET 437
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 1 MLVFRGSPKSSRKSIRHIDQIREADAAALQNNRNQPRPRE-MPKKEAKALDAPNIRNDYY 59
+L FR P++ ++ + +A+L +PR +P+ + LDAP+I +D+Y
Sbjct: 89 ILAFRNKPQAP------VELLPSNHSASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFY 142
Query: 60 SNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAIGSR 118
N++DWG N+LA+AL +YLW++ + L P TS+ W+ D + VA+G
Sbjct: 143 LNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLN 202
Query: 119 RSKLQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPS 167
S++QLWD+ +++ V L WN H IL+ G +N++ + + P
Sbjct: 203 NSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTGGMDGLIINNDVRI-RSPI 258
Query: 168 MTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
+ G H V L S G + S G D + WD
Sbjct: 259 VETYRG---HTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
>AT4G33260.1 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041233-16043180 REVERSE
LENGTH=447
Length = 447
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Query: 127 AETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQ 186
+T VC L W+++ +E+LS HGF+ N+L LWKYPSM K+ L H SRVL+++Q
Sbjct: 345 VDTGSQVCSLLWSKNERELLSSHGFT----QNQLTLWKYPSMVKMAELTGHTSRVLYMAQ 400
Query: 187 SPDGLTVVSAGADESLRFWDVFGPPAT 213
SPDG TV SA DE+LRFW+VFG P T
Sbjct: 401 SPDGCTVASAAGDETLRFWNVFGVPET 427
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 1 MLVFRGSPKSSRKSIRHIDQIREADAAALQNNRNQPRPRE-MPKKEAKALDAPNIRNDYY 59
+L FR P++ ++ + +A+L +PR +P+ + LDAP+I +D+Y
Sbjct: 79 ILAFRNKPQAP------VELLPSNHSASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFY 132
Query: 60 SNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAIGSR 118
N++DWG N+LA+AL +YLW++ + L P TS+ W+ D + VA+G
Sbjct: 133 LNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLN 192
Query: 119 RSKLQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPS 167
S++QLWD+ +++ V L WN H IL+ G +N++ + + P
Sbjct: 193 NSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTGGMDGLIINNDVRI-RSPI 248
Query: 168 MTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
+ G H V L S G + S G D + WD
Sbjct: 249 VETYRG---HTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
>AT5G27570.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9734896-9736131 REVERSE LENGTH=411
Length = 411
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 72/121 (59%), Gaps = 16/121 (13%)
Query: 103 SVAWSQ-DAKLVAIGSR--RSKLQLWD---------AETSKPVCGLEWNRHHKEILSGHG 150
++AW A L+A G K++ W+ ET VC L W++ +E+LS HG
Sbjct: 272 ALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHG 331
Query: 151 FSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWDVFGP 210
F+ N+L LWKYPSM K+ LN H SRVL ++QSPDG TV SA DE+LR W+VFG
Sbjct: 332 FT----QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Query: 211 P 211
P
Sbjct: 388 P 388
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 1 MLVFRGSPKSSRKSIRHIDQIREADAAALQNNRNQPRPREMPKKEAKALDAPNIRNDYYS 60
+L FR PK+ S +D Q +PR R +P+ + LDAP I +D+Y
Sbjct: 44 ILAFRNKPKALLSS-------NHSDPPHQQPISVKPR-RYIPQNSERVLDAPGIADDFYL 95
Query: 61 NIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAIGSRR 119
N++DWG +N+LA+ALG +YLW++ S L + P TS+ W+QD +AIG
Sbjct: 96 NLLDWGSSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDN 155
Query: 120 SKLQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSM 168
S++QLWD +++ V L WN H IL+ G +N++ +
Sbjct: 156 SEVQLWDCVSNRQVRTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIVE 212
Query: 169 TKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
T LG H V L S G + S G D + WD
Sbjct: 213 TYLG----HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>AT5G27945.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:9976007-9977601 FORWARD LENGTH=428
Length = 428
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 71/121 (58%), Gaps = 16/121 (13%)
Query: 103 SVAWSQ-DAKLVAIGSR--RSKLQLWD---------AETSKPVCGLEWNRHHKEILSGHG 150
++AW A L+A G K+ W+ ET VC L W++ +E+LS HG
Sbjct: 289 ALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHG 348
Query: 151 FSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWDVFGP 210
F+ N+L LWKYPSM K+ LN H SRVL ++QSPDG TV SA DE+LR W+VFG
Sbjct: 349 FT----QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Query: 211 P 211
P
Sbjct: 405 P 405
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 70 ILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAIGSRRSKLQLWDAE 128
I+ LG +YLW++ S L + P TS+ W+QD +A+G S++Q+WD
Sbjct: 123 IVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCV 182
Query: 129 TSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPH 177
+++ V L WN H IL+ G +N++ + + +G H
Sbjct: 183 SNRHVRTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRI----RSSIIGTYVGH 235
Query: 178 ASRVLHLSQSPDGLTVVSAGADESLRFWD 206
V L S G + S G D + WD
Sbjct: 236 TEEVCGLKWSESGKKLASGGNDNVVHIWD 264
>AT5G27080.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:9529603-9531081 REVERSE LENGTH=466
Length = 466
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 18/135 (13%)
Query: 103 SVAWSQ-DAKLVAIGSR--RSKLQLWD---------AETSKPVCGLEWNRHHKEILSGHG 150
++AW A L+A G K++ W+ ET VC L W++ +E+LS HG
Sbjct: 303 ALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHG 362
Query: 151 FSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWDVFGP 210
F+ N+L LWKYPSM+K+ LN H SRVL ++QSP+G TV SA DE+LR W+VFG
Sbjct: 363 FT----QNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
Query: 211 P--ATDDTSKISYLD 223
P T + +YL+
Sbjct: 419 PPKTTKKAASKNYLE 433
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 1 MLVFRGSPKSSRKSIRHIDQIREADAAALQNNRNQPRPREMPKKEAKALDAPNIRNDYYS 60
+L FR PK+ S H D + QN ++ R +P+ + LDAP + +D+Y
Sbjct: 75 ILAFRNKPKALLSS-NHSD-------SPHQNPKSVKPRRYIPQNSERVLDAPGLMDDFYL 126
Query: 61 NIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAIGSRR 119
N++DWG N+LA+ALG +YLW++ S L + P TS+ W+QD +A+G
Sbjct: 127 NLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDN 186
Query: 120 SKLQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSM 168
S++QLWD +++ V L WN H IL+ G +N++ +
Sbjct: 187 SEVQLWDFVSNRQVRTLIGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIVG 243
Query: 169 TKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
T LG H V L S G + S G + WD
Sbjct: 244 TYLG----HTEEVCGLKWSESGKKLASGGNYNVVHIWD 277
>AT5G26900.1 | Symbols: | Transducin family protein / WD-40 repeat
family protein | chr5:9463752-9465086 FORWARD LENGTH=444
Length = 444
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 16/121 (13%)
Query: 103 SVAWSQ-DAKLVAIGSR--RSKLQLWD---------AETSKPVCGLEWNRHHKEILSGHG 150
++AW A L+A G K++ W+ ET VC L W++ +E+LS HG
Sbjct: 305 ALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHG 364
Query: 151 FSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWDVFGP 210
F+ N+L LWKYPSM+K+ LN H SRVL ++QSP+G TV SA DE+LR W+VFG
Sbjct: 365 FT----QNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
Query: 211 P 211
P
Sbjct: 421 P 421
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 35/222 (15%)
Query: 1 MLVFRGSPKSSRKSIRHIDQIREADAAALQNNRNQPRP----REMPKKEAKALDAPNIRN 56
+L FR PKS S H D + P+P R +P+ + LDAP +R+
Sbjct: 78 ILAFRNKPKS-LLSTNHSDSPHQ-----------NPKPVKPRRYIPQNSERVLDAPGLRD 125
Query: 57 DYYSNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAI 115
D+ N++DWG N+LA+ALG +YLW++ S L + P TS+ W+QD +A+
Sbjct: 126 DFSLNLLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAV 185
Query: 116 GSRRSKLQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWK 164
G S++QLWD +++ V L W+ H IL+ G +N++ +
Sbjct: 186 GLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNH---ILTTGGMDGKIVNNDVRIRS 242
Query: 165 YPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
T LG H V L S G S G D + WD
Sbjct: 243 SIVETYLG----HTEEVCGLKWSESGNKQASGGNDNVVHIWD 280
>AT4G22910.1 | Symbols: FZR2, CCS52A1 | FIZZY-related 2 |
chr4:12012743-12015663 FORWARD LENGTH=483
Length = 483
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 9/175 (5%)
Query: 38 PREMPKKEAKALDAPNIRNDYYSNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATG 97
PR++P+ K LDAP +++D+Y N++DW N+LAV LG+ +YLWN+ S+ V L
Sbjct: 157 PRKVPRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGA 216
Query: 98 NDFPTSVAWSQDAKLVAIGSRRSKLQLWDAETSKPVCGLEWNRHHKEILS-GHGFSTSAS 156
D SV W+ +A+G+ K+Q+WDA K +E +R L+ G +S S
Sbjct: 217 EDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSSVLSSGS 276
Query: 157 HNELCL-----WKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
++ L + ++KL G H S V L S D + S G D L W+
Sbjct: 277 RDKSILQRDIRCQEDHVSKLAG---HKSEVCGLKWSYDNRELASGGNDNRLFVWN 328
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 128 ETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQS 187
+T VC L W+++ E++S HG+S N++ +WKYP+M+K+ L H RVL+L+ S
Sbjct: 384 DTCSQVCNLAWSKNVNELVSTHGYS----QNQIIVWKYPTMSKIATLTGHTYRVLYLAVS 439
Query: 188 PDGLTVVSAGADESLRFWDVFGPPATDDT 216
PDG T+V+ DE+LRFW+VF P + +T
Sbjct: 440 PDGQTIVTGAGDETLRFWNVFPSPKSQNT 468
>AT4G33260.2 | Symbols: CDC20.2 | Transducin family protein / WD-40
repeat family protein | chr4:16041195-16043180 REVERSE
LENGTH=441
Length = 441
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 26/219 (11%)
Query: 1 MLVFRGSPKSSRKSIRHIDQIREADAAALQNNRNQPRPRE-MPKKEAKALDAPNIRNDYY 59
+L FR P++ ++ + +A+L +PR +P+ + LDAP+I +D+Y
Sbjct: 79 ILAFRNKPQAP------VELLPSNHSASLHQQPKSVKPRRYIPQTSERTLDAPDIVDDFY 132
Query: 60 SNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFP-TSVAWSQDAKLVAIGSR 118
N++DWG N+LA+AL +YLW++ + L P TS+ W+ D + VA+G
Sbjct: 133 LNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLN 192
Query: 119 RSKLQLWDAETSKP-----------VCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPS 167
S++QLWD+ +++ V L WN H IL+ G +N++ + + P
Sbjct: 193 NSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTGGMDGLIINNDVRI-RSPI 248
Query: 168 MTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWD 206
+ G H V L S G + S G D + WD
Sbjct: 249 VETYRG---HTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 127 AETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPHASRVLHLSQ 186
+T VC L W+++ +E+LS HGF+ N+L LWKYPSM K+ L H SRVL+++Q
Sbjct: 345 VDTGSQVCSLLWSKNERELLSSHGFT----QNQLTLWKYPSMVKMAELTGHTSRVLYMAQ 400
Query: 187 SPDGLTVVSAGADESLRFWDVF 208
SPDG TV SA DE+L +F
Sbjct: 401 SPDGCTVASAAGDETLSCRAIF 422
>AT5G13840.2 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Query: 123 QLWDAETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPHASRVL 182
QL +T VC L W+++ EI+S HG+S N++ LWKYPSM+K+ L H+ RVL
Sbjct: 377 QLNSIDTGSQVCNLAWSKNVNEIVSTHGYS----QNQIMLWKYPSMSKVATLTGHSMRVL 432
Query: 183 HLSQSPDGLTVVSAGADESLRFWDVF 208
+L+ SPDG T+V+ DE+LRFW+VF
Sbjct: 433 YLATSPDGQTIVTGAGDETLRFWNVF 458
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 60/215 (27%)
Query: 47 KALDAPNIRNDYYSNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFPTSVAW 106
K LDAP++++D+Y N++DW N+LAV LG+ +YLW + ++ V L ND SV W
Sbjct: 164 KVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQW 223
Query: 107 SQDAKLVAIGSRRSKLQLWDAETSK----------------------------------- 131
+++ ++IG+ ++Q+WD K
Sbjct: 224 TREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHD 283
Query: 132 ----------------PVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLN 175
VCGL+W+ +E+ SG + N+L +W S + L
Sbjct: 284 IRVQSDFVSKLVGHKSEVCGLKWSHDDRELASG------GNDNQLLVWNNHSQQPILKLT 337
Query: 176 PHASRVLHLSQSPDGLTVVSAG---ADESLRFWDV 207
H + V ++ SP +++++G AD +RFW+
Sbjct: 338 EHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNT 372
>AT5G13840.1 | Symbols: FZR3 | FIZZY-related 3 |
chr5:4468677-4470706 REVERSE LENGTH=481
Length = 481
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Query: 123 QLWDAETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLNPHASRVL 182
QL +T VC L W+++ EI+S HG+S N++ LWKYPSM+K+ L H+ RVL
Sbjct: 377 QLNSIDTGSQVCNLAWSKNVNEIVSTHGYS----QNQIMLWKYPSMSKVATLTGHSMRVL 432
Query: 183 HLSQSPDGLTVVSAGADESLRFWDVF 208
+L+ SPDG T+V+ DE+LRFW+VF
Sbjct: 433 YLATSPDGQTIVTGAGDETLRFWNVF 458
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 60/215 (27%)
Query: 47 KALDAPNIRNDYYSNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATGNDFPTSVAW 106
K LDAP++++D+Y N++DW N+LAV LG+ +YLW + ++ V L ND SV W
Sbjct: 164 KVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQW 223
Query: 107 SQDAKLVAIGSRRSKLQLWDAETSK----------------------------------- 131
+++ ++IG+ ++Q+WD K
Sbjct: 224 TREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHD 283
Query: 132 ----------------PVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSMTKLGGLN 175
VCGL+W+ +E+ SG + N+L +W S + L
Sbjct: 284 IRVQSDFVSKLVGHKSEVCGLKWSHDDRELASG------GNDNQLLVWNNHSQQPILKLT 337
Query: 176 PHASRVLHLSQSPDGLTVVSAG---ADESLRFWDV 207
H + V ++ SP +++++G AD +RFW+
Sbjct: 338 EHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNT 372
>AT4G11920.1 | Symbols: CCS52A2, FZR1 | cell cycle switch protein 52
A2 | chr4:7160618-7163257 REVERSE LENGTH=475
Length = 475
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 63 MDWGKNNILAVALGSE--MYLWNSVSNDVITLFKATGNDFPTSVAWS-QDAKLVAIGSRR 119
+ W +N + G++ +++WN S + F ++AWS L+A G
Sbjct: 298 LKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAV-KAIAWSPHHFGLLASGGGT 356
Query: 120 SK--LQLWD---------AETSKPVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYPSM 168
+ ++ W+ +T+ VC L W+++ E++S HG+S N++ +WKYP+M
Sbjct: 357 ADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYS----QNQIIVWKYPTM 412
Query: 169 TKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWDVFGPP 211
+KL L H+ RVL+L+ SPDG T+V+ DE+LRFW+VF P
Sbjct: 413 SKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSP 455
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 60/224 (26%)
Query: 38 PREMPKKEAKALDAPNIRNDYYSNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFKATG 97
PR++ + K LDAP +++D+Y N++DW N+LAV LG+ +YLWN+ S+ V L
Sbjct: 149 PRKILRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGV 208
Query: 98 NDFPTSVAWSQDAKLVAIGSRRSKLQLWDAETSK-------------------------- 131
++ SV W+ +AIG+ +Q+WD K
Sbjct: 209 DETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSVLSSGS 268
Query: 132 -------------------------PVCGLEWNRHHKEILSGHGFSTSASHNELCLWKYP 166
+CGL+W+ ++E+ SG + N+L +W
Sbjct: 269 RDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASG------GNDNKLFVWNQH 322
Query: 167 SMTKLGGLNPHASRVLHLSQSPDGLTVVSAG---ADESLRFWDV 207
S + HA+ V ++ SP ++++G AD +RFW+
Sbjct: 323 STQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNT 366
>AT4G29830.1 | Symbols: VIP3 | Transducin/WD40 repeat-like
superfamily protein | chr4:14597728-14599157 FORWARD
LENGTH=321
Length = 321
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 67 KNNILAVALGSE--MYLWNSVSNDVITLF------------KATGNDFPTSVAWSQDAKL 112
K ILAVA GS + LW++ S +I+ K + F SVAWS + K
Sbjct: 113 KGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKR 172
Query: 113 VAIGSRRSKLQLWDAETSK----------PVCGLEWNRHHKEILSGHGFSTSASHNELCL 162
+A GS + ++D + SK PV L ++ +L FS S + +
Sbjct: 173 LACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVL----FSGS-DDGHVNM 227
Query: 163 WKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFWDV 207
T LG ++ H S VL + SPDG + + +D ++R WD+
Sbjct: 228 HDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
LENGTH=473
Length = 473
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 46/172 (26%)
Query: 35 QPRPREMPKKEAKALDAPNIRNDYYSNIMDWGKNNILAVALGSEMYLWNSVSNDVITLFK 94
+P + PKK + + Y+S W I + + + LWN ++ +T+F+
Sbjct: 345 EPSVSKQPKKRLTG-HQQLVNHVYFSPDGKW----IASASFDKSVRLWNGITGQFVTVFR 399
Query: 95 ATGNDFPT-SVAWSQDAKLVAIGSRRSKLQLWDAETSKPVCGLEWNRHHKEILSGHGFST 153
G+ P V+WS D++L+ GS+ S L++W+ T K K+ L GH
Sbjct: 400 --GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK----------LKQDLPGH---- 443
Query: 154 SASHNELCLWKYPSMTKLGGLNPHASRVLHLSQSPDGLTVVSAGADESLRFW 205
A V + SPDG VVS G D L+ W
Sbjct: 444 ------------------------ADEVFAVDWSPDGEKVVSGGKDRVLKLW 471