Miyakogusa Predicted Gene

Lj6g3v0156160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0156160.1 Non Chatacterized Hit- tr|C5XFX8|C5XFX8_SORBI
Putative uncharacterized protein Sb03g030360
OS=Sorghu,40,4e-19,Pterin_4a,Transcriptional coactivator/pterin
dehydratase; no description,Transcriptional coactivator,CUFF.57561.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51110.1 | Symbols:  | Transcriptional coactivator/pterin deh...   243   6e-65
AT5G51110.2 | Symbols:  | Transcriptional coactivator/pterin deh...   241   2e-64
AT1G29810.1 | Symbols:  | Transcriptional coactivator/pterin deh...   103   9e-23

>AT5G51110.1 | Symbols:  | Transcriptional coactivator/pterin
           dehydratase | chr5:20778316-20779380 REVERSE LENGTH=220
          Length = 220

 Score =  243 bits (620), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 114/167 (68%), Positives = 136/167 (81%), Gaps = 1/167 (0%)

Query: 44  ANDFLGDFGARDPFPAEIESQFGDKVLGNNDTEHKILIPNIAALSLSQQNCTPVSPLQHP 103
           A DFLGDFGARDP+P EI SQFGDKVLG   TEHKILIPN + LSLSQ  C+PVS  Q P
Sbjct: 54  AQDFLGDFGARDPYPEEIASQFGDKVLGCQSTEHKILIPNASVLSLSQLQCSPVSSSQPP 113

Query: 104 ISEDDASKLLRKVVGWRLV-HEESGLKLQCLWKLRDFKSGVELINRISKVVEAEGHFPNI 162
           +S DDA  LL KV+GW +V +E  GLK++C+WK+RDF  GVELINRI KV EA GH+P++
Sbjct: 114 LSGDDARTLLHKVLGWSIVDNEAGGLKIRCMWKVRDFGCGVELINRIHKVAEASGHYPSL 173

Query: 163 HLEQPNQIRAVLWTASIGGLSMNDFVVAAKIGEIKTSDLAPKKRVWA 209
           HLE P Q+RA L+T+SIGGLSMNDF++AAKI +IKTSDL+P+KR WA
Sbjct: 174 HLESPTQVRAELFTSSIGGLSMNDFIMAAKIDDIKTSDLSPRKRAWA 220


>AT5G51110.2 | Symbols:  | Transcriptional coactivator/pterin
           dehydratase | chr5:20778316-20779380 REVERSE LENGTH=193
          Length = 193

 Score =  241 bits (616), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 135/165 (81%), Gaps = 1/165 (0%)

Query: 46  DFLGDFGARDPFPAEIESQFGDKVLGNNDTEHKILIPNIAALSLSQQNCTPVSPLQHPIS 105
           DFLGDFGARDP+P EI SQFGDKVLG   TEHKILIPN + LSLSQ  C+PVS  Q P+S
Sbjct: 29  DFLGDFGARDPYPEEIASQFGDKVLGCQSTEHKILIPNASVLSLSQLQCSPVSSSQPPLS 88

Query: 106 EDDASKLLRKVVGWRLV-HEESGLKLQCLWKLRDFKSGVELINRISKVVEAEGHFPNIHL 164
            DDA  LL KV+GW +V +E  GLK++C+WK+RDF  GVELINRI KV EA GH+P++HL
Sbjct: 89  GDDARTLLHKVLGWSIVDNEAGGLKIRCMWKVRDFGCGVELINRIHKVAEASGHYPSLHL 148

Query: 165 EQPNQIRAVLWTASIGGLSMNDFVVAAKIGEIKTSDLAPKKRVWA 209
           E P Q+RA L+T+SIGGLSMNDF++AAKI +IKTSDL+P+KR WA
Sbjct: 149 ESPTQVRAELFTSSIGGLSMNDFIMAAKIDDIKTSDLSPRKRAWA 193


>AT1G29810.1 | Symbols:  | Transcriptional coactivator/pterin
           dehydratase | chr1:10435606-10437406 REVERSE LENGTH=187
          Length = 187

 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 1/120 (0%)

Query: 89  LSQQNCTPVSPLQ-HPISEDDASKLLRKVVGWRLVHEESGLKLQCLWKLRDFKSGVELIN 147
           LS + C P +      ++E  A  LL+KV GW L ++   LKL   W+++ F  G++   
Sbjct: 66  LSTKKCVPCNAKDLRAMTEQSAQDLLQKVAGWDLANDNDTLKLHRSWRVKSFTKGLDFFQ 125

Query: 148 RISKVVEAEGHFPNIHLEQPNQIRAVLWTASIGGLSMNDFVVAAKIGEIKTSDLAPKKRV 207
           R++ + E+EGH P++HL   N ++  +WT +IGGL+ NDF++AAKI E++  DL  KK+V
Sbjct: 126 RVADIAESEGHHPDLHLVGWNNVKIEIWTHAIGGLTENDFILAAKINELQVEDLLRKKKV 185