Miyakogusa Predicted Gene
- Lj6g3v0156070.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0156070.2 Non Chatacterized Hit- tr|D7KTV1|D7KTV1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.71,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.57643.2
(252 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47070.1 | Symbols: SPL1 | squamosa promoter binding protein-... 239 2e-63
AT3G60030.1 | Symbols: SPL12 | squamosa promoter-binding protein... 229 2e-60
AT1G20980.1 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa p... 101 6e-22
AT1G76580.1 | Symbols: | Squamosa promoter-binding protein-like... 88 5e-18
AT5G18830.2 | Symbols: SPL7 | squamosa promoter binding protein-... 74 1e-13
AT5G18830.1 | Symbols: SPL7, ATSPL7 | squamosa promoter binding ... 74 1e-13
AT5G18830.3 | Symbols: SPL7 | squamosa promoter binding protein-... 74 1e-13
>AT2G47070.1 | Symbols: SPL1 | squamosa promoter binding
protein-like 1 | chr2:19337144-19340552 FORWARD
LENGTH=881
Length = 881
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 137/176 (77%), Gaps = 7/176 (3%)
Query: 70 QIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYP-WTQQDSHQSSPPQTSRNXX 128
Q+KMN+FDLNDIYIDSDD D+ER P TN TSSLDYP W HQSSPPQTSRN
Sbjct: 290 QVKMNDFDLNDIYIDSDD--TDVERSPPPTNPATSSLDYPSWI----HQSSPPQTSRNSD 343
Query: 129 XXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGC 188
+ +AQ RT RIVFKLFGKEP++FP++LR QILDWLSHSPTD+ESYIRPGC
Sbjct: 344 SASDQSPSSSSEDAQMRTGRIVFKLFGKEPNEFPIVLRGQILDWLSHSPTDMESYIRPGC 403
Query: 189 IVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
IVLTIYLRQAE WEE+ DL SLG+LLD+SDD W TGW+++RVQ+Q+AF++NG
Sbjct: 404 IVLTIYLRQAETAWEELSDDLGFSLGKLLDLSDDPLWTTGWIYVRVQNQLAFVYNG 459
>AT3G60030.1 | Symbols: SPL12 | squamosa promoter-binding
protein-like 12 | chr3:22165856-22169410 REVERSE
LENGTH=927
Length = 927
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 147/203 (72%), Gaps = 14/203 (6%)
Query: 52 SISNTP--PAYAE------ARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERL-PGTTNHV 102
S+S TP YA A D + Q+K+N+FDLNDIYIDSDD D+ER P TN
Sbjct: 302 SVSETPWQEVYANSAQERVAPDRSEKQVKVNDFDLNDIYIDSDD-TTDIERSSPPPTNPA 360
Query: 103 TSSLDYPWTQQDSHQSSPPQTSR-NXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDF 161
TSSLDY QDS QSSPPQTSR N +G+AQ RTDRIVFKLFGKEP+DF
Sbjct: 361 TSSLDY---HQDSRQSSPPQTSRRNSDSASDQSPSSSSGDAQSRTDRIVFKLFGKEPNDF 417
Query: 162 PLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSD 221
P+ LR QIL+WL+H+PTD+ESYIRPGCIVLTIYLRQ EA WEE+C DL+ SL RLLD+SD
Sbjct: 418 PVALRGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEASWEELCCDLSFSLRRLLDLSD 477
Query: 222 DTFWRTGWVHIRVQHQMAFIFNG 244
D W GW+++RVQ+Q+AF FNG
Sbjct: 478 DPLWTDGWLYLRVQNQLAFAFNG 500
>AT1G20980.1 | Symbols: SPL14, FBR6, SPL1R2, ATSPL14 | squamosa
promoter binding protein-like 14 | chr1:7325042-7328933
FORWARD LENGTH=1035
Length = 1035
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%)
Query: 141 EAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEA 200
+AQ RT +IVFKL K+PS P LR++I +WLS+ P+++ESYIRPGC+VL++Y+ + A
Sbjct: 500 DAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMSPA 559
Query: 201 VWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
WE++ L LG LL S FWR + Q+A NG
Sbjct: 560 AWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNG 603
>AT1G76580.1 | Symbols: | Squamosa promoter-binding protein-like
(SBP domain) transcription factor family protein |
chr1:28734600-28738451 FORWARD LENGTH=988
Length = 988
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 142 AQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAV 201
AQ RT +I FKLF K+PS P LR +I WLS P+D+ES+IRPGC++L++Y+ + +
Sbjct: 466 AQERTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASA 525
Query: 202 WEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMA 239
WE++ +L + L V D FW + Q+A
Sbjct: 526 WEQLEENLLQRVRSL--VQDSEFWSNSRFLVNAGRQLA 561
>AT5G18830.2 | Symbols: SPL7 | squamosa promoter binding
protein-like 7 | chr5:6276116-6280227 FORWARD LENGTH=775
Length = 775
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 144 CRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWE 203
C T RI FKL+ P++FP LR QI WL++ P ++E YIRPGC +LT+++ E +W
Sbjct: 318 CPTGRISFKLYDWNPAEFPRRLRHQIFQWLANMPVELEGYIRPGCTILTVFIAMPEIMWA 377
Query: 204 EICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
++ D + L + + G + + + + + + G
Sbjct: 378 KLSKDPVAYLDEFILKPGKMLFGRGSMTVYLNNMIFRLIKG 418
>AT5G18830.1 | Symbols: SPL7, ATSPL7 | squamosa promoter binding
protein-like 7 | chr5:6276116-6280227 FORWARD LENGTH=801
Length = 801
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 144 CRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWE 203
C T RI FKL+ P++FP LR QI WL++ P ++E YIRPGC +LT+++ E +W
Sbjct: 318 CPTGRISFKLYDWNPAEFPRRLRHQIFQWLANMPVELEGYIRPGCTILTVFIAMPEIMWA 377
Query: 204 EICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
++ D + L + + G + + + + + + G
Sbjct: 378 KLSKDPVAYLDEFILKPGKMLFGRGSMTVYLNNMIFRLIKG 418
>AT5G18830.3 | Symbols: SPL7 | squamosa promoter binding
protein-like 7 | chr5:6276116-6280362 FORWARD LENGTH=818
Length = 818
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 144 CRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWE 203
C T RI FKL+ P++FP LR QI WL++ P ++E YIRPGC +LT+++ E +W
Sbjct: 318 CPTGRISFKLYDWNPAEFPRRLRHQIFQWLANMPVELEGYIRPGCTILTVFIAMPEIMWA 377
Query: 204 EICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
++ D + L + + G + + + + + + G
Sbjct: 378 KLSKDPVAYLDEFILKPGKMLFGRGSMTVYLNNMIFRLIKG 418