Miyakogusa Predicted Gene

Lj6g3v0098570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0098570.1 Non Chatacterized Hit- tr|D4D6M8|D4D6M8_TRIVH
Putative uncharacterized protein OS=Trichophyton
verru,24.86,0.0002,coiled-coil,NULL; seg,NULL,CUFF.57498.1
         (227 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13540.1 | Symbols:  | unknown protein; INVOLVED IN: N-termin...    97   1e-20
AT3G23930.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    92   4e-19

>AT4G13540.1 | Symbols:  | unknown protein; INVOLVED IN: N-terminal
           protein myristoylation; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT3G23930.1);
           Has 4658 Blast hits to 3455 proteins in 431 species:
           Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi -
           436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783
           (source: NCBI BLink). | chr4:7869896-7870604 FORWARD
           LENGTH=210
          Length = 210

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 11/128 (8%)

Query: 100 EWELMGTKLLVQQMKEERARRDEAVEKWKQLYLAIKTELDDLIQRTYDGDGLYWKAEEND 159
           EWE      +V+QM  ERA R+EAVE+WKQLY AIK ELDDLI  TY G+ L  K +E  
Sbjct: 80  EWEW-----VVEQMCLERAVREEAVERWKQLYFAIKNELDDLIHTTY-GEALRQKPQEEV 133

Query: 160 IQ-MENLKKELYDKEETIKALKAQLVSMEKEKYKKEREFDLLRQSLRIMNGKKNSIQSKE 218
            + ++ L+KE+  + ETI+ LK ++  MEK++  KERE DLLRQSLRI+ G       K 
Sbjct: 134 AKAVQELRKEVKARGETIETLKGRINLMEKQQNGKEREIDLLRQSLRILGGS----SGKN 189

Query: 219 KHLKSKLR 226
           K L S  R
Sbjct: 190 KALSSTTR 197


>AT3G23930.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; LOCATED IN: cellular_component
           unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432
           proteins in 646 species: Archae - 82; Bacteria - 826;
           Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86;
           Other Eukaryotes - 3525 (source: NCBI BLink). |
           chr3:8647028-8647775 FORWARD LENGTH=224
          Length = 224

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 73/112 (65%), Gaps = 9/112 (8%)

Query: 107 KLLVQQMKEERARRDEAVEKWKQLYLAIKTELDDLIQRTYDGDG---------LYWKAEE 157
           K +V++M  ERA RDEAVEKWKQLYLAIK ELD LI  T    G            + E 
Sbjct: 88  KWVVEEMCVERAVRDEAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLEEQEEEET 147

Query: 158 NDIQMENLKKELYDKEETIKALKAQLVSMEKEKYKKEREFDLLRQSLRIMNG 209
              ++E L+ E+  KEET++ L+ Q+V M+++KY+KERE DLLRQSLRI+  
Sbjct: 148 EAKRVEVLRDEVRVKEETVETLEEQIVLMDRQKYEKEREIDLLRQSLRILGS 199