Miyakogusa Predicted Gene

Lj6g3v0096480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0096480.1 tr|G7I6Q7|G7I6Q7_MEDTR 3-isopropylmalate
dehydratase OS=Medicago truncatula GN=MTR_1g045750 PE=4
SV=,91.39,0,seg,NULL; Aconitase iron-sulfur
domain,Aconitase/3-isopropylmalate dehydratase large subunit,
alpha/,CUFF.57501.1
         (511 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13430.1 | Symbols: IIL1, ATLEUC1 | isopropyl malate isomeras...   863   0.0  
AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350...    86   6e-17
AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13543077-135484...    82   6e-16
AT4G35830.1 | Symbols: ACO1 | aconitase 1 | chr4:16973007-169779...    79   7e-15
AT4G35830.2 | Symbols: ACO1 | aconitase 1 | chr4:16973007-169772...    79   7e-15

>AT4G13430.1 | Symbols: IIL1, ATLEUC1 | isopropyl malate isomerase
           large subunit 1 | chr4:7804194-7807789 REVERSE
           LENGTH=509
          Length = 509

 Score =  863 bits (2229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/514 (79%), Positives = 455/514 (88%), Gaps = 8/514 (1%)

Query: 1   MASSIVAPSSTSFF---NTKKDLALSAFXXXXXXXXXQRCQKPAPRRISCSVAAPQQLQR 57
           MAS I   SS+ F    ++K DL +S+F          RCQK +  R   SV APQ+  R
Sbjct: 1   MASVI---SSSPFLCKSSSKSDLGISSFPKSSQISI-HRCQKKSISRKIVSVMAPQK-DR 55

Query: 58  QPSTTGSVKTAMTMTEKILARASEKAHLTPGDNVWVNVDILMTHDVCGPGSIGIFKREFG 117
            P TTGSVKT MTMTEKILARASEK+ + PGDN+WVNVD+LMTHDVCGPG+ GIFKREFG
Sbjct: 56  SPGTTGSVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFG 115

Query: 118 QDAKVWDREKVVIIPDHYIFTSDERANRNVDILRDFCHEQNIKYFYDIKDLSNFKVNPDY 177
           + AKVWD EK+V+IPDHYIFT+D+RANRNVDI+R+ C EQNIKYFYDI DL NFK NPDY
Sbjct: 116 EKAKVWDPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDY 175

Query: 178 KGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKLLLKVPP 237
           KGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLG GK+LLKVPP
Sbjct: 176 KGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILLKVPP 235

Query: 238 TLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLTMEERMTLCNMVV 297
           T+RF++DGEMP+YL AKDLILQIIGEISVAGATYK+MEF GTT+ESL+MEERMTLCNMVV
Sbjct: 236 TMRFILDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCNMVV 295

Query: 298 EAGGKNGVVPADSTTYKYLEGKTSVAYEPVYSDQQARFLSEYRFDVSKLEPLVAKPHSPD 357
           EAGGKNGV+P D+TT  Y+E +TSV +EPVYSD  A F+++YRFDVSKLEP+VAKPHSPD
Sbjct: 296 EAGGKNGVIPPDATTLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPD 355

Query: 358 NRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKIFLASGKTVKVPTFLVPATQKVWMDV 417
           NRALARECKDVKIDRVYIGSCTGGKTEDFMAAAK+F A+G+ VKVPTFLVPATQKVWMDV
Sbjct: 356 NRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDV 415

Query: 418 YSLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPKVCVSTTNRNFPG 477
           Y+LPVPG+GGKTC+QIFEEAGCDTPASPSCGACLGGP DTYAR+NEP+VCVSTTNRNFPG
Sbjct: 416 YALPVPGAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQVCVSTTNRNFPG 475

Query: 478 RMGHKEGEIYLASPYTAAASALTGYVTDPREFLQ 511
           RMGHKEG+IYLASPYTAAASALTG V DPREFLQ
Sbjct: 476 RMGHKEGQIYLASPYTAAASALTGRVADPREFLQ 509


>AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350
           FORWARD LENGTH=990
          Length = 990

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 171/463 (36%), Gaps = 101/463 (21%)

Query: 128 VVIIPDHYIFTSDERANRNVDILRDFCHEQNIKYFYDIK----DLSNFKVNPDYKGVCH- 182
           V ++ DH +     R+   V    +   ++N + F  +K       N  V P   G+ H 
Sbjct: 216 VDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFQNMLVVPPGSGIVHQ 275

Query: 183 --------IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKLLLK 234
                   +    +G   P  V+ GTDSHT      G    G+G  +A   +    + + 
Sbjct: 276 VNLEYLGRVVFNTKGLLYPDSVV-GTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMV 334

Query: 235 VPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLTMEERMTLCN 294
           +P  + F + G+M N + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 335 LPGVVGFKLAGKMRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGNGMSGLSLADRATIAN 394

Query: 295 MVVEAGGKNGVVPADSTTYKYLE--GKT--SVAYEPVY-----------SDQQARFLSEY 339
           M  E G   G  P D  T +YL+  G++  +VA    Y             QQ R  S Y
Sbjct: 395 MSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANNMFVDYNEPQQDRVYSSY 454

Query: 340 -RFDVSKLEPLVAKPHSPDNRALARE-------CKDVKI------------DRVY----- 374
              ++  +EP ++ P  P +R   +E       C D K+            ++V      
Sbjct: 455 LELNLDDVEPCISGPKRPHDRVTLKEMKADWHSCLDSKVGFKGFAIPKEAQEKVVNFSFD 514

Query: 375 ---------------IGSCTGGKTEDFMAAA------------------KIFLASGKTVK 401
                          I SCT       M  A                  K  LA G  V 
Sbjct: 515 GQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACDLGLQVKPWIKTSLAPGSGV- 573

Query: 402 VPTFLVPATQKVWMDVYSLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARM 461
           V  +L+ +  + +++     + G G  TC       G     + S GA +    D  A  
Sbjct: 574 VTKYLLKSGLQEYLNEQGFNIVGYGCTTC------IGNSGEINESVGAAI-TENDIVA-- 624

Query: 462 NEPKVCVSTTNRNFPGRMGHKEGEIYLASPYTAAASALTGYVT 504
                 V + NRNF GR+       YLASP    A AL G V 
Sbjct: 625 ----AAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVN 663


>AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13543077-13548427
           FORWARD LENGTH=995
          Length = 995

 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 171/462 (37%), Gaps = 101/462 (21%)

Query: 128 VVIIPDHYIFT----SDERANRNVDILRDFCHEQNIKYFYDIKDLSNFKVNPDYKGVCH- 182
           V ++ DH I      S++ A +N+++      E+     +      N  V P   G+ H 
Sbjct: 221 VDLVVDHSIQVDFARSEDAAQKNLELEFKRNKERFTFLKWGSTAFQNMLVVPPGSGIVHQ 280

Query: 183 --------IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKLLLK 234
                   +    +G   P  V+ GTDSHT      G    G+G  +A   +    + + 
Sbjct: 281 VNLEYLGRVVFNSKGFLYPDSVV-GTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMV 339

Query: 235 VPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLTMEERMTLCN 294
           +P  + F +DG++   + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 340 LPGVVGFKLDGKLKEGVTATDLVLTVTQILRKHGVVGKFVEFYGEGMSELSLADRATIAN 399

Query: 295 MVVEAGGKNGVVPADSTTYKYLE--GKTSVAYEPVYS-------------DQQARFLSEY 339
           M  E G   G  P D  T +YL+  G++      + S              QQ R  + Y
Sbjct: 400 MSPEYGATMGFFPVDHVTLEYLKLTGRSDETVSMIESYLRANNMFVDYNEPQQERAYTSY 459

Query: 340 -RFDVSKLEPLVAKPHSPDNRALARECK-------------------------------- 366
            + D+  +EP ++ P  P +R   ++ K                                
Sbjct: 460 LQLDLGHVEPCISGPKRPHDRVPLKDMKADWHACLDNPVGFKGFAVPKEKQEEVVKFSYN 519

Query: 367 ----DVKIDRVYIG---SCTGGKTEDFMAAAKIFLAS----GKTVK--VPTFLVPATQKV 413
               ++K   V I    SCT       M  A +        G  VK  V T L P ++ V
Sbjct: 520 GQPAEIKHGSVVIAAITSCTNTSNPSVMIGAALVAKKASDLGLKVKPWVKTSLAPGSRVV 579

Query: 414 WMDVYSLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPKV------- 466
             + Y L   G       Q FE  G        C  C+G   +      +P+V       
Sbjct: 580 --EKY-LDRSGLRESLTKQGFEIVGY------GCTTCIGNSGNL-----DPEVASAIEGT 625

Query: 467 -----CVSTTNRNFPGRMGHKEGEIYLASPYTAAASALTGYV 503
                 V + NRNF GR+  +    YLASP    A AL G V
Sbjct: 626 DIIPAAVLSGNRNFEGRVHPQTRANYLASPPLVVAYALAGTV 667


>AT4G35830.1 | Symbols: ACO1 | aconitase 1 | chr4:16973007-16977949
           REVERSE LENGTH=898
          Length = 898

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 172/453 (37%), Gaps = 83/453 (18%)

Query: 128 VVIIPDHYIFTSDERANRNVDILRDFCHEQNIKYFYDIK----DLSNFKVNPDYKGVCH- 182
           V ++ DH +     R+   V    +   ++N + F  +K       N  V P   G+ H 
Sbjct: 124 VDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQ 183

Query: 183 --------IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKLLLK 234
                   +     G   P  V+ GTDSHT      G    G+G  +A   +    + + 
Sbjct: 184 VNLEYLARVVFNTNGLLYPDSVV-GTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMV 242

Query: 235 VPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLTMEERMTLCN 294
           +P  + F + G++ + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 243 LPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATIAN 302

Query: 295 MVVEAGGKNGVVPADSTTYKYLE--GKTSVAYEPV------------YSDQQAR--FLSE 338
           M  E G   G  P D  T +YL   G++      +            YS+ +++  + S 
Sbjct: 303 MSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYSSC 362

Query: 339 YRFDVSKLEPLVAKPHSP-----------------DNR------ALARECKDVKIDRVYI 375
              ++  +EP V+ P  P                 DNR      A+ +E +   ++  + 
Sbjct: 363 LELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGFAVPKEAQSKAVEFNFN 422

Query: 376 GSCTGGKTEDFMAAAKIFLASGKTVKVPTFLVPATQ------------KVWMDVYSLPVP 423
           G+    +  D + AA   + S      P+ ++ A              K W+   SL  P
Sbjct: 423 GTTAQLRHGDVVIAA---ITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKT-SL-AP 477

Query: 424 GSG------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPKV-------CVST 470
           GSG       K+  Q +      +     C  C+G   D +  +    V        V +
Sbjct: 478 GSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLS 537

Query: 471 TNRNFPGRMGHKEGEIYLASPYTAAASALTGYV 503
            NRNF GR+       YLASP    A AL G V
Sbjct: 538 GNRNFEGRVHPLTRANYLASPPLVVAYALAGTV 570


>AT4G35830.2 | Symbols: ACO1 | aconitase 1 | chr4:16973007-16977278
           REVERSE LENGTH=795
          Length = 795

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 172/453 (37%), Gaps = 83/453 (18%)

Query: 128 VVIIPDHYIFTSDERANRNVDILRDFCHEQNIKYFYDIK----DLSNFKVNPDYKGVCH- 182
           V ++ DH +     R+   V    +   ++N + F  +K       N  V P   G+ H 
Sbjct: 21  VDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQ 80

Query: 183 --------IALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGAGKLLLK 234
                   +     G   P  V+ GTDSHT      G    G+G  +A   +    + + 
Sbjct: 81  VNLEYLARVVFNTNGLLYPDSVV-GTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMV 139

Query: 235 VPPTLRFVMDGEMPNYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLTMEERMTLCN 294
           +P  + F + G++ + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 140 LPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATIAN 199

Query: 295 MVVEAGGKNGVVPADSTTYKYLE--GKTSVAYEPV------------YSDQQAR--FLSE 338
           M  E G   G  P D  T +YL   G++      +            YS+ +++  + S 
Sbjct: 200 MSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYSSC 259

Query: 339 YRFDVSKLEPLVAKPHSP-----------------DNR------ALARECKDVKIDRVYI 375
              ++  +EP V+ P  P                 DNR      A+ +E +   ++  + 
Sbjct: 260 LELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGFAVPKEAQSKAVEFNFN 319

Query: 376 GSCTGGKTEDFMAAAKIFLASGKTVKVPTFLVPATQ------------KVWMDVYSLPVP 423
           G+    +  D + AA   + S      P+ ++ A              K W+   SL  P
Sbjct: 320 GTTAQLRHGDVVIAA---ITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKT-SL-AP 374

Query: 424 GSG------GKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPKV-------CVST 470
           GSG       K+  Q +      +     C  C+G   D +  +    V        V +
Sbjct: 375 GSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLS 434

Query: 471 TNRNFPGRMGHKEGEIYLASPYTAAASALTGYV 503
            NRNF GR+       YLASP    A AL G V
Sbjct: 435 GNRNFEGRVHPLTRANYLASPPLVVAYALAGTV 467