Miyakogusa Predicted Gene

Lj6g3v0085380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0085380.1 Non Chatacterized Hit- tr|K4BRZ9|K4BRZ9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.6,7e-19,seg,NULL,CUFF.57484.1
         (293 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G04310.1 | Symbols:  | unknown protein; Has 44 Blast hits to ...    94   1e-19
AT2G33250.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    83   2e-16

>AT3G04310.1 | Symbols:  | unknown protein; Has 44 Blast hits to 44
           proteins in 12 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:1141581-1142528 REVERSE LENGTH=269
          Length = 269

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 13/214 (6%)

Query: 86  FGN---KRRWWSDDSPGIETESSGIWEDAIDNMWIFKIFKSYGWTLPIILASWLLATGPK 142
           FGN   KR WW DD    +     + E+  D   +F++F++  W L  I  S LL T   
Sbjct: 62  FGNRKKKRPWWLDDDDDDDDNDDWMNEEEEDWSMVFEVFRTLSWMLAPIGISLLLGTDSN 121

Query: 143 ALLMTLAIPLGQSALALAFEKLWGRS--ESXXXXXXXXXXXXXTANGNRVXXXXXXXXXX 200
           A +M LA+PL QS L+L   K+W R    S             + +  R           
Sbjct: 122 AGVMALAVPLVQSVLSLVVSKVWSRPSIRSMKRSRRDTFSRSASVSSGRTRKARQGGNMR 181

Query: 201 XXXXXXXYQSWVVENNGSVGTDRGNREAPSFGGWDELERSRPATRSSRAMGGSQRMPTEA 260
                  Y+SW+      VG D  N     +GGWD+L+  R   R+   +  + R   + 
Sbjct: 182 GGVDKGGYKSWI------VGDDDSNSMGTGYGGWDDLDTLR-EIRNDNPLNENVRPKQQF 234

Query: 261 GR-LSRRERKSDTPLLLRLLIAVFPFLGSWTKML 293
            R  +RR R  + PLLLR+LIA FPFLGSWTK+L
Sbjct: 235 ERKATRRWRVKEKPLLLRMLIAAFPFLGSWTKLL 268


>AT2G33250.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
           growth stages; BEST Arabidopsis thaliana protein match
           is: unknown protein (TAIR:AT3G04310.1); Has 41 Blast
           hits to 41 proteins in 12 species: Archae - 0; Bacteria
           - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0;
           Other Eukaryotes - 0 (source: NCBI BLink). |
           chr2:14097454-14098678 FORWARD LENGTH=299
          Length = 299

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 15/189 (7%)

Query: 107 IWEDAIDNMWIFKIFKSYGWTLPIILASWLLATGPKALLMTLAIPLGQSALALAFEKLWG 166
           I E+ +DN+WI K FKSYG+ LP I+ S   +TGPKA L++LA+ +G S L  AF+KL G
Sbjct: 123 ILEEIVDNVWILKAFKSYGYLLPFIILSLFFSTGPKAFLVSLAVAIGPSLLFYAFQKLIG 182

Query: 167 RSESXXXXXXXXXXXXXTANGNRVXXXXXXXXXXXXXXXXXYQSWVVENN-GSVGTDRGN 225
             +              T+  N+                  Y    V NN    G +R +
Sbjct: 183 WDK-----------RRGTSIANQFGIEEEEEEVERSSSRIRYNPSTVRNNVNGRGVNRSS 231

Query: 226 R-EAPSFGGWDELERSRPATRSSRAMGGSQRMPTEAGRLSRRERKSDTPLLLRLLIAVFP 284
              A  FGGWDEL+     T   R     ++ P    +  RRE+ ++ PLLLRLL+++FP
Sbjct: 232 AGMASKFGGWDELD-GLGTTIPERPTSEPKKKPLPKRKRVRREKAAE-PLLLRLLVSLFP 289

Query: 285 FLGSWTKML 293
           FL ++T ML
Sbjct: 290 FLSTYTNML 298