Miyakogusa Predicted Gene
- Lj6g3v0062040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0062040.1 Non Chatacterized Hit- tr|F6H3H2|F6H3H2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.83,1e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; FAMILY NOT NAMED,NULL; PPR: pentatrico,CUFF.57465.1
(411 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 9e-46
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 5e-39
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 152 5e-37
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 148 6e-36
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 146 2e-35
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 145 4e-35
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 3e-34
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 6e-34
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 6e-33
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 134 9e-32
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 2e-31
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 7e-31
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 8e-31
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 130 1e-30
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 130 1e-30
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 127 1e-29
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 127 1e-29
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 127 2e-29
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 126 2e-29
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 4e-29
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 125 5e-29
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 124 9e-29
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 123 3e-28
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 122 4e-28
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 122 5e-28
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 122 6e-28
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 122 7e-28
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 7e-27
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 1e-26
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 115 4e-26
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 5e-26
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 8e-26
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 114 9e-26
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 114 2e-25
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 113 3e-25
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 112 4e-25
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 110 2e-24
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 109 3e-24
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 108 7e-24
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 107 1e-23
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 4e-23
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 5e-23
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 6e-23
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 9e-23
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 97 2e-20
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 96 6e-20
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 95 7e-20
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 93 3e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 92 5e-19
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 4e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 4e-18
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 89 8e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 87 2e-17
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 8e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 8e-17
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 84 1e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 80 2e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 9e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 78 1e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 76 3e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 75 6e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 2e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 8e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 65 8e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 9e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 63 3e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 4e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 59 6e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 9e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 55 7e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 55 1e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 52 7e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 50 3e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/410 (49%), Positives = 280/410 (68%), Gaps = 14/410 (3%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
+R ANL L ++ Q LARA+H +I+T GF+ I NRLID+YCKSS + YA L
Sbjct: 13 NRYAANLRLCLPLRRTSLQ-LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FD+ PD +RTT++S Y A+G++ LA +F PV +RDT+ YNAM+ +SHN DG++
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS 131
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A+ LF +MK +GF PD F+F++VL ++L+A++E C Q H +K G + SV N L+
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
S Y CAS SP L+ SARK+FDE + +KDE SWTTM+ GYV+N +LL+G
Sbjct: 192 SVYSKCAS-----SPSLLHSARKVFDE--ILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 243 MTHPIA-VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M + VA+NAMISGYV G Y+EA + R+M S GI++DE+TY S+I A GL
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+Q+HAYVLR E F +N+L++ Y KCGK +AR +F+KMP +DLVSWNA+LS
Sbjct: 305 GKQVHAYVLR-----REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
GY+++ + EAK IF+E+ E+N+L+W +MISGLAE+GFGEE LKLF+ MK
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 194/418 (46%), Gaps = 27/418 (6%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPY--- 58
D+ T A++ LA L + + HA L +G + N L+ +Y K ++ P
Sbjct: 147 DNFTFASV-LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 59 -AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
A +FD+ D S TT+++ Y G L E+L ++ ++YNAM+ Y +
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK-LVAYNAMISGYVNR 264
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
A+++ RM G D F++ +V+ A + + +Q+H V++
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG-KQVHAYVLRREDFSF-HF 322
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N+L+S Y C AR +F++ P KD SW +++GYV + + A+
Sbjct: 323 DNSLVSLYYKCGK---------FDEARAIFEKMP--AKDLVSWNALLSGYVSSGHIGEAK 371
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
+ M ++W MISG +G EE F M G + +Y ++ I + G
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
+ G+Q HA +L+ S LS NALIT Y KCG + +AR+VF MP D VSWN
Sbjct: 432 AYCNGQQYHAQLLKIGFDSS----LSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN 487
Query: 358 AILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
A+++ EA ++ E+ ++ + +T +++ + +G ++ K F+ M+
Sbjct: 488 ALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSME 545
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 211/417 (50%), Gaps = 38/417 (9%)
Query: 8 NLFLAQLNHPSATQTLARA--IHAHILTTGF-RLTPLIRNRLIDIYCKSSNIPYAHHLFD 64
+L + L T++L + IH H+ TGF R L+ N LI +Y K A +FD
Sbjct: 47 DLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
+ +++S ++S Y +G + A +F++ P RD +S+N MV Y+ + + H A+
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE--RDVVSWNTMVIGYAQDGNLHEAL 164
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL-NTLLS 183
+ +R G + FSF+ +L A +QL + G + V L N +LS
Sbjct: 165 WFYKEFRRSGIKFNEFSFAGLLTACV-------KSRQLQLNRQAHGQVLVAGFLSNVVLS 217
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
C I A + + M SA++ FDE ++ KD WTT+I+GY + D+ +A KL M
Sbjct: 218 CSIIDAYAKCGQ----MESAKRCFDE--MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEM 271
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
V+W A+I+GYVR G A D FRKM ++G++ +++T++S + AS + G+
Sbjct: 272 PEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGK 331
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF----DKMPVRDLVSWNAI 359
++H Y++RT V+P+ I ++LI Y+K G L + VF DK D V WN +
Sbjct: 332 EIHGYMIRTNVRPNAIVI----SSLIDMYSKSGSLEASERVFRICDDK---HDCVFWNTM 384
Query: 360 LSGYIN------ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+S A R+ + FR P R L V+++ + SG EE L+ F M
Sbjct: 385 ISALAQHGLGHKALRMLDDMIKFRVQPNRTTL--VVILNACSHSGLVEEGLRWFESM 439
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 25/305 (8%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R H +L GF ++ +ID Y K + A FD+ DI TTL+S Y+
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYA 256
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G+++ AEKLF P ++ +S+ A++ Y G+ A+ LF +M G P+ F+F
Sbjct: 257 KLGDMEAAEKLFCEMPE--KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S+ L A + IA H +++H +++ V V+++L+ Y +S L AS
Sbjct: 315 SSCLCASASIASLR-HGKEIHGYMIRTNVRPNAIVISSLIDMY--------SKSGSLEAS 365
Query: 203 AR--KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMIS 256
R ++ D+ + D W TMI+ ++ A ++LD M P +++
Sbjct: 366 ERVFRICDD----KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 257 GYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
GL EE F M GI D+ Y LI G C ++L + +
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL---LGRAGCFKELMRKIEEMPFE 478
Query: 316 PSEHF 320
P +H
Sbjct: 479 PDKHI 483
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
PI VA + +S + +A + GI++ SL+ +T G+ +
Sbjct: 10 PICVA-QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H ++ T + + +N LI Y KCGK + A +VFD+M +R+L SWN ++SGY+
Sbjct: 69 HRHLKITGFKRPNTLL---SNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ L A+ +F +PER++++W M+ G A+ G E+L + + +
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 206/406 (50%), Gaps = 22/406 (5%)
Query: 8 NLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
NL +N + T A+ +H ++ +G + + N L+++Y K+ +A LFD+ P
Sbjct: 18 NLLQKSVNKSNGRFT-AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
FS T+LSAYS G++ + F+ P RD++S+ M+ Y + H A+++
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP--QRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M ++G P F+ + VL +++ E +++H +VK G+ SV N+LL+ Y
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCME-TGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C P++ A+ +FD + +D SW MIA +++ + A + M
Sbjct: 194 CG------DPMM---AKFVFDRMVV--RDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V WN+MISG+ + G A D F KM + D +T S++SA N G+Q+H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV--SWNAILSGYI 364
++++ T S V NALI+ Y++CG + AR + ++ +DL + A+L GYI
Sbjct: 303 SHIVTTGFDISG----IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +AK IF + +R+++ WT MI G + G E++ LF M
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 189/396 (47%), Gaps = 26/396 (6%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +H+ I+ G R + N L+++Y K + A +FD+ DI S +++ +
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF-APDPFSF 142
G + LA F + RD +++N+M+ ++ A+ +F +M RD +PD F+
Sbjct: 225 VGQMDLAMAQFE--QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 143 STVLGAMSLIAEEEWHC--QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
++VL A A E C +Q+H +V G VLN L+S Y C +
Sbjct: 283 ASVLSA---CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG---------V 330
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
+AR+L ++ +T ++ GY++ D+ A+ + + VAW AMI GY +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
HG Y EA + FR M G + + YT +++S + + + G+Q+H + V+ E +
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG----SAVKSGEIY 446
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKFIFREV 379
+SV+NALIT Y K G + A FD + RD VSW +++ EEA +F +
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
L +T+ + S +G + + F+ MK
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 154/282 (54%), Gaps = 22/282 (7%)
Query: 136 APDPFSFSTVLGAMSLIAEE-------EWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
AP P S ST+L + + ++ + Q +HC V+K G+M ++N L++ Y
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVY--- 59
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
ARKLFDE PL + SW T+++ Y + D+ S + D + +
Sbjct: 60 ------SKTGYALHARKLFDEMPL--RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDS 111
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V+W MI GY G Y +A M GI+ ++T T+++++ T G+++H++
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+++ ++ + +SV+N+L+ Y KCG + A+ VFD+M VRD+ SWNA+++ ++ +
Sbjct: 172 IVKLGLRGN----VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
++ A F ++ ER+++TW MISG + G+ +L +F++M
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 197/387 (50%), Gaps = 48/387 (12%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
R +HA ++ +GF I+NRLID Y K ++ +FDK P +I++ ++++ +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G + A+ LF + P RD ++N+MV ++ + A+ F M ++GF + +SF++
Sbjct: 100 GFLDEADSLFRSMPE--RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
VL A C L+ D+ K GV S + +SP L
Sbjct: 158 VLSA----------CSGLN-DMNK-GVQ----------------VHSLIAKSPFL----- 184
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
D + ++ Y + ++ A+++ D M V+WN++I+ + ++G
Sbjct: 185 ----------SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPA 234
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
EA D F+ M ++ DE T S+ISA + G+++H V++ + ILS
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND-KLRNDIILS- 292
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
NA + Y KC ++ +AR +FD MP+R++++ +++SGY A + A+ +F ++ ERN+
Sbjct: 293 -NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 385 LTWTVMISGLAESGFGEESLKLFNQMK 411
++W +I+G ++G EE+L LF +K
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLK 378
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 175/359 (48%), Gaps = 22/359 (6%)
Query: 60 HHLFDKTPN-PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
H L K+P D++ + L+ YS GNV A+++F+ + R+ +S+N+++ + N
Sbjct: 175 HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD--EMGDRNVVSWNSLITCFEQNG 232
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
A+ +F M PD + ++V+ A + ++ + Q++H VVK + +L
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG-QEVHGRVVKNDKLRNDIIL 291
Query: 179 -NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N + Y C+ + AR +FD P+ ++ + T+MI+GY +AR
Sbjct: 292 SNAFVDMYAKCSR---------IKEARFIFDSMPI--RNVIAETSMISGYAMAASTKAAR 340
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
+ M V+WNA+I+GY ++G EEA F + + Y++ +++ A +
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 298 LFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
+ G Q H +VL+ Q E + V N+LI Y KCG + + VF KM RD VS
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 356 WNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
WNA++ G+ EA +FRE+ E + +T ++S +GF EE F+ M
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 172/396 (43%), Gaps = 51/396 (12%)
Query: 23 LARAIHAHILTTG-FRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ + +H ++ R ++ N +D+Y K S I A +FD P ++ + T+++S Y
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ A + K A +F T + R+ +S+NA++ Y+ N + A+ LF +KR+ P +S
Sbjct: 331 AMAASTKAARLMF--TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F+ +L A + +AE Q H V+K G
Sbjct: 389 FANILKACADLAELHLG-MQAHVHVLKHG------------------------------- 416
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
F + D ++I YV+ + + M V+WNAMI G+ ++
Sbjct: 417 -----FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEH 319
G EA + FR+M G + D T ++SA + G GR + + R V +H
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFI--- 375
+ ++ + G L +A+ + ++MP++ D V W ++L+ R + K++
Sbjct: 532 Y-----TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEK 586
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
EV N + ++ + AE G E+ + + M+
Sbjct: 587 LLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMR 622
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 187/391 (47%), Gaps = 53/391 (13%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
H F PD+F T LLS Y+ G + A K+F++ + R+ +++AM+ AYS
Sbjct: 104 HARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS--MRERNLFTWSAMIGAYSRENR 161
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
KLF M +DG PD F F +L + + E + +H V+K G+ V N
Sbjct: 162 WREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVE-AGKVIHSVVIKLGMSSCLRVSN 220
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
++L+ Y C + A K F + ++D +W +++ Y +N A +L
Sbjct: 221 SILAVYAKCGE---------LDFATKFFRR--MRERDVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 240 LDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
+ M P V WN +I GY + G + A D +KM + GI D +T+T++IS +
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 296 TG-----------LFNCGRQLHAYV----------LRTVVQPSE-HFI---------LSV 324
G +F G +A L+ + Q SE H I + V
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
N+L+ Y+KCGKL AR+VFD + +D+ +WN++++GY A +A +F + + NL
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 385 ----LTWTVMISGLAESGFGEESLKLFNQMK 411
+TW MISG ++G E++ LF +M+
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 181/467 (38%), Gaps = 101/467 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH+ ++ G + N ++ +Y K + +A F + D+ + ++L AY
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 84 AGNVKLAEKLFNA-------------------------------------TPVTLRDTIS 106
G + A +L T D +
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
+ AM+ HN + A+ +F +M G P+ + + + A S + ++H
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN-QGSEVHSIA 378
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG 226
VK G + V N+L+ Y C + ARK+FD + KD +W +MI G
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGK---------LEDARKVFD--SVKNKDVYTWNSMITG 427
Query: 227 YVRNDDLASARKLL----DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQM 281
Y + A +L D P + WN MISGY+++G EA D F++M G +Q
Sbjct: 428 YCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 282 DEYTYTSLISASFNTG-------LFN--------------------CG--------RQLH 306
+ T+ +I+ G LF C R++H
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
VLR + I +V NAL Y K G + +R +F M +D+++WN+++ GY+
Sbjct: 548 GCVLRRNLDA----IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLH 603
Query: 367 RRLEEAKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLF 407
A +F ++ P R L+ ++ GL G +E K+F
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM--GNVDEGKKVF 648
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 148/377 (39%), Gaps = 89/377 (23%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H+ + GF L+ N L+D+Y K + A +FD N D+++ ++++ Y AG
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 87 VKLAEKLF------NATPVTL--------------------------------RDTISYN 108
A +LF N P + R+T ++N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 109 AMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVK 168
++ Y N A++LF +M+ F P+ + ++L A + + + +++H V++
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK-MVREIHGCVLR 552
Query: 169 WGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 228
+ + +V N L Y
Sbjct: 553 RNLDAIHAVKNALTDTY------------------------------------------A 570
Query: 229 RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 288
++ D+ +R + GM + WN++I GYV HG Y A F +M + GI + T +S
Sbjct: 571 KSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSS 630
Query: 289 LISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+I A G + G+++ + ++ EH +A++ Y + +L +A +
Sbjct: 631 IILAHGLMGNVDEGKKVFYSIANDYHIIPALEHC-----SAMVYLYGRANRLEEALQFIQ 685
Query: 347 KMPVRDLVS-WNAILSG 362
+M ++ W + L+G
Sbjct: 686 EMNIQSETPIWESFLTG 702
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
R+G EA + G ++ TY L+ + ++G + GR LHA +P
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-FGLFTEPD-- 114
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ V L++ Y KCG + AR+VFD M R+L +W+A++ Y R E +FR
Sbjct: 115 --VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 184/370 (49%), Gaps = 38/370 (10%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ IH +I+ + N ++ Y + YA +FD+ P P++FS LL AYS A
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
G + E F P RD +++N +++ YS + AAVK + M RD FS
Sbjct: 86 GLISEMESTFEKLPD--RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--------FSA 135
Query: 145 VLGAMSL-----IAEEEWHC---QQLHCDVVKWGVMCVPSVLNTLLSCY--ICCASSTLV 194
L ++L ++ H +Q+H V+K G V + LL Y + C S
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD--- 192
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
A+K+F L ++ + +++ G + + A +L GM +V+W AM
Sbjct: 193 --------AKKVF--YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKD-SVSWAAM 241
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I G ++GL +EA + FR+M G++MD+Y + S++ A G N G+Q+HA ++RT
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
Q +H + V +ALI Y KC L A+ VFD+M +++VSW A++ GY R EEA
Sbjct: 302 Q--DH--IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 375 IFREVPERNL 384
IF ++ +
Sbjct: 358 IFLDMQRSGI 367
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 174/407 (42%), Gaps = 60/407 (14%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPD 70
+ +L+ + +L + IH ++ GF L+ + L+ +Y I A +F + +
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+L+ A G ++ A +LF +D++S+ AM+K + N A++ F M
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGME---KDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 131 KRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
K G D + F +VL G + I E +Q+H +++
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEG----KQIHACIIR------------------- 298
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
T + + + SA +I Y + L A+ + D M
Sbjct: 299 ----TNFQDHIYVGSA-------------------LIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V+W AM+ GY + G EEA F M GI D YT ISA N G Q H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ + H++ +V+N+L+T Y KCG + + +F++M VRD VSW A++S Y
Sbjct: 396 ---KAITSGLIHYV-TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
R E +F ++ + L +T T +IS + +G E+ + F M
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 139/354 (39%), Gaps = 84/354 (23%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IHA I+ T F+ + + LID+YCK + YA +FD+
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ--------------- 333
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
++ +S+ AMV Y AVK+F+ M+R G PD ++
Sbjct: 334 ------------------KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ A + ++ E Q H + G++ +V N+L++ Y C + +
Sbjct: 376 QAISACANVSSLE-EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD---------IDDS 425
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+LF+E ++ +D SWT AM+S Y + G
Sbjct: 426 TRLFNE--MNVRDAVSWT-------------------------------AMVSAYAQFGR 452
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFI 321
E F KM G++ D T T +ISA GL G++ + +V H+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY- 511
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARRLEEAKF 374
+ +I +++ G+L +A + MP D + W +LS N LE K+
Sbjct: 512 ----SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+ +H ++R + P E F+ N ++ Y AR VFD++P +L SWN +L
Sbjct: 26 KMIHGNIIRALPYP-ETFLY---NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLA 81
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
Y A + E + F ++P+R+ +TW V+I G + SG ++K +N M
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 91/225 (40%), Gaps = 41/225 (18%)
Query: 191 STLVESPVLMAS---ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+ +V + LM S AR++FD P Q + SW ++ Y + ++ + +
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIP--QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRD 102
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V WN +I GY GL A + M + T +++ S + G + G+Q+H
Sbjct: 103 GVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIH 162
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
V++ E ++L V + L+ Y G +
Sbjct: 163 GQVIKLGF---ESYLL-VGSPLLYMYANVGCI---------------------------- 190
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+AK +F + +RN + + ++ GL G E++L+LF M+
Sbjct: 191 ---SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME 232
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 207/423 (48%), Gaps = 56/423 (13%)
Query: 21 QTLARAIHAHILTTGFRLTPLI-RNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLS 79
+TL R + +L GF + +I N L+ +Y +S + A +LFD+ P+ + FS T++
Sbjct: 42 ETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIE 101
Query: 80 AY-------------------------------SAAGNVKLAEKLFNATPVTLRDTISYN 108
Y + AG + +A +LFNA P +D ++ N
Sbjct: 102 GYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPE--KDVVTLN 159
Query: 109 AMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC-QQLHCDVV 167
+++ Y N A++LF K F+ D + +TVL A + + E C +Q+H ++
Sbjct: 160 SLLHGYILNGYAEEALRLF---KELNFSADAITLTTVLKACAEL--EALKCGKQIHAQIL 214
Query: 168 KWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY 227
GV C + ++L++ Y C + MAS + + + D+ S + +I+GY
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCG-------DLRMAS----YMLEQIREPDDHSLSALISGY 263
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
+ +R L D ++ + WN+MISGY+ + + EA F +M + + D T
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLA 322
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
++I+A G G+Q+H + + + + V + L+ Y+KCG ++A ++F +
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDD----IVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLF 407
+ D + N+++ Y + R+++AK +F + ++L++W M +G +++G E+L+ F
Sbjct: 379 VESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYF 438
Query: 408 NQM 410
+QM
Sbjct: 439 HQM 441
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 189/392 (48%), Gaps = 23/392 (5%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IHA IL G + + L+++Y K ++ A ++ ++ PD S + L+S Y+
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G V + LF+ + R I +N+M+ Y N A+ LF M R+ D + +
Sbjct: 266 CGRVNESRGLFDRK--SNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLA 322
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
V+ A + E +Q+HC K+G++ V +TLL Y C SP+ A
Sbjct: 323 AVINACIGLGFLETG-KQMHCHACKFGLIDDIVVASTLLDMYSKCG------SPM---EA 372
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
KLF E + D +MI Y + A+++ + + + ++WN+M +G+ ++G
Sbjct: 373 CKLFSE--VESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
E + F +MH + + DE + +S+ISA + G Q+ A T+V ++S
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA--TIVGLDSDQVVS 488
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
++LI Y KCG + R VFD M D V WN+++SGY + EA +F+++
Sbjct: 489 --SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 384 L----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ +T+ V+++ G EE KLF MK
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKLFESMK 578
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 9/211 (4%)
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
++ + FD P ++D SW +++G+ + +L+ AR+L + M V N+++ GY+
Sbjct: 110 GTSLRFFDMMP--ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+G EEA F++++ D T T+++ A CG+Q+HA +L V+
Sbjct: 168 NGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK- 223
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+N++L+ Y KCG L A + +++ D S +A++SGY N R+ E++ +F
Sbjct: 224 ---MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKS 280
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
R ++ W MISG + E+L LFN+M+
Sbjct: 281 NRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 151/366 (41%), Gaps = 55/366 (15%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
DSRT+A + A + + +H H G ++ + L+D+Y K + A
Sbjct: 317 DSRTLAAVINACIGL--GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LF + + D +++ Y + G + A+++F + + IS+N+M +S N
Sbjct: 375 LFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE--RIENKSLISWNSMTNGFSQNGCTV 432
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
++ F +M + D S S+V+ A + I+ E +Q+ G+ V ++L
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELG-EQVFARATIVGLDSDQVVSSSL 491
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y C G+V + R++ D
Sbjct: 492 IDLYCKC-------------------------------------GFVEH-----GRRVFD 509
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M V WN+MISGY +G EA D F+KM GI+ + T+ +++A GL
Sbjct: 510 TMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEE 569
Query: 302 GRQLHA--YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNA 358
GR+L V V EHF + ++ + G + +A + ++MP D W++
Sbjct: 570 GRKLFESMKVDHGFVPDKEHF-----SCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 359 ILSGYI 364
IL G +
Sbjct: 625 ILRGCV 630
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 181/348 (52%), Gaps = 25/348 (7%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F +L+ Y + G++ A K+F T + +D +S+N+M+ + A++LF +
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVF--TTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL-NTLLSCYICC 188
M+ + + VL A + I E+ Q C ++ + V L N +L Y C
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQV--CSYIEENRVNVNLTLANAMLDMYTKC 280
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
S + A++LFD + +KD +WTTM+ GY ++D +AR++L+ M
Sbjct: 281 GS---------IEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 329
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
VAWNA+IS Y ++G EA F ++ +++++ T S +SA G GR +H+
Sbjct: 330 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
Y+ + ++ + H V +ALI Y+KCG L ++REVF+ + RD+ W+A++ G
Sbjct: 390 YIKKHGIRMNFH----VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
EA +F ++ E N+ +T+T + + +G +E+ LF+QM+
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 169/390 (43%), Gaps = 83/390 (21%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSS--NIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ H H++ TG P ++L + SS ++ YA +FD+ P P+ F+
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFA--------- 97
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPFS 141
+N +++AY+ D ++ F+ M + P+ ++
Sbjct: 98 ------------------------WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 133
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F ++ A + ++ Q LH VK V V N+L+ CY C +
Sbjct: 134 FPFLIKAAAEVSSLSLG-QSLHGMAVKSAVGSDVFVANSLIHCYFSCGD---------LD 183
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
SA K+F + +KD SW +M I+G+V+
Sbjct: 184 SACKVF--TTIKEKDVVSWNSM-------------------------------INGFVQK 210
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G ++A + F+KM S ++ T ++SA GRQ+ +Y+ V +
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN---- 266
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
L++ NA++ YTKCG + A+ +FD M +D V+W +L GY + E A+ + +P+
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++++ W +IS ++G E+L +F++++
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 52/343 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
R + ++I + + N ++D+Y K +I A LFD D + TT+L Y+
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFS 141
+ + + A ++ N+ P +D +++NA++ AY N + A+ +F ++ + + +
Sbjct: 310 ISEDYEAAREVLNSMP--QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+ L A + + E + +H + K G+ V + L+ Y C +
Sbjct: 368 LVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGD---------LE 417
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
+R++F+ + ++D W+AMI G H
Sbjct: 418 KSREVFNS--VEKRD-------------------------------VFVWSAMIGGLAMH 444
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPSEHF 320
G EA D F KM ++ + T+T++ A +TGL + L H + P E
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 362
+ + L + G L +A + + MP+ S W A+L
Sbjct: 505 YACIVDVL----GRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 183/379 (48%), Gaps = 67/379 (17%)
Query: 15 NHPSAT-----QTLA--RAIHAHILTTGFRLTPLIRNRLIDIYCKSS----NIPYAHHLF 63
NHPS + +TL R IHA ++ G T ++LI+ +C S +PYA +F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVF 91
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAA 123
P++ + +N M + ++ + D +A
Sbjct: 92 KTIQEPNL---------------------------------LIWNTMFRGHALSSDPVSA 118
Query: 124 VKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
+KL+V M G P+ ++F VL + + ++ QQ+H V+K G V +L+S
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFVLKSCAK-SKAFKEGQQIHGHVLKLGCDLDLYVHTSLIS 177
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y+ + A K+FD++P +D S+T +I GY + +A+KL D +
Sbjct: 178 MYVQNGR---------LEDAHKVFDKSP--HRDVVSYTALIKGYASRGYIENAQKLFDEI 226
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
V+WNAMISGY G Y+EA + F+ M ++ DE T +++SA +G GR
Sbjct: 227 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 304 QLHAYVLRTVVQPSEHFI---LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
Q+H ++ +H L + NALI Y+KCG+L A +F+++P +D++SWN ++
Sbjct: 287 QVHLWI-------DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 361 SGYINARRLEEAKFIFREV 379
GY + +EA +F+E+
Sbjct: 340 GGYTHMNLYKEALLLFQEM 358
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 180/394 (45%), Gaps = 57/394 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH H+L G L + LI +Y ++ + AH +FDK+P+ D+ S T L+ Y++
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G ++ A+KLF+ PV +D +S+NAM+ Y+ + A++LF M + PD +
Sbjct: 213 RGYIENAQKLFDEIPV--KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
TV+ A + E +Q+H + G ++N L+ Y C + +A
Sbjct: 271 TVVSACAQSGSIELG-RQVHLWIDDHGFGSNLKIVNALIDLYSKCGE---------LETA 320
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
LF+ P KD SW T+I GY + L
Sbjct: 321 CGLFERLPY--KDVISWNTLIGGYTHMN-------------------------------L 347
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV---LRTVVQPSEHF 320
Y+EA F++M G ++ T S++ A + G + GR +H Y+ L+ V S
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS--- 404
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
S+ +LI Y KCG + A +VF+ + + L SWNA++ G+ R + + +F +
Sbjct: 405 --SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 381 ERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ + +T+ ++S + SG + +F M
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 99/180 (55%), Gaps = 4/180 (2%)
Query: 231 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
+ L A + + P + WN M G+ A + M S+G+ + YT+ ++
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
+ + F G+Q+H +VL+ L V+ +LI+ Y + G+L A +VFDK P
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCD----LDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 351 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
RD+VS+ A++ GY + +E A+ +F E+P +++++W MISG AE+G +E+L+LF M
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 49/240 (20%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ YS G ++ A LF P +D IS+N ++ Y+H A+ LF M R G
Sbjct: 307 LIDLYSKCGELETACGLFERLPY--KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHC-DVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
P+ + ++L A C L D+ +W + + L
Sbjct: 365 PNDVTMLSILPA----------CAHLGAIDIGRWIHVYIDKRLKG--------------- 399
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
V AS+ + T++I Y + D+ +A ++ + + H +WNAMI
Sbjct: 400 --VTNASSLR---------------TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
G+ HG + +FD F +M +GIQ D+ T+ L+SA ++G+ + GR ++ RT+ Q
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGR----HIFRTMTQ 498
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 172/362 (47%), Gaps = 37/362 (10%)
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
++ S G +K A KLF+ P D N +++ + ++ V L+ M++ G +PD
Sbjct: 54 ASLSVPGALKYAHKLFDEIPKP--DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPD 111
Query: 139 PFSFSTVLGAMSLIAEEEWHCQ--QLHCDVVKWGVMCVPSVLNTLLSCYICCA----SST 192
++F+ VL A S + EW H VV+ G + V N L+ + C +S
Sbjct: 112 RYTFTFVLKACSKL---EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASE 168
Query: 193 LVESPVL------------------MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
L + + A +LFDE P KD+ +W MI G ++ ++
Sbjct: 169 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY--KDQVAWNVMITGCLKCKEMD 226
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
SAR+L D T V WNAMISGYV G +EA F++M G D T SL+SA
Sbjct: 227 SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILS-VNNALITFYTKCGKLVQAREVFDKMPVRDL 353
G G++LH Y+L T S ++ + + NALI Y KCG + +A EVF + RDL
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQ 409
+WN ++ G + E + +F E+ N +T+ +I + SG +E K F+
Sbjct: 347 STWNTLIVG-LALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 410 MK 411
M+
Sbjct: 406 MR 407
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 190/413 (46%), Gaps = 55/413 (13%)
Query: 4 RTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF 63
R + N F+ L + + I+A I+ G + + +++D K ++ YA LF
Sbjct: 7 REVENYFIPFLQRVKSRNEWKK-INASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLF 65
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAA 123
++ NP++F YN++++AY+HN
Sbjct: 66 NQVSNPNVFL---------------------------------YNSIIRAYTHNSLYCDV 92
Query: 124 VKLFVRMKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
++++ ++ R F PD F+F + + + + + +Q+H + K+G N L+
Sbjct: 93 IRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC-YLGKQVHGHLCKFGPRFHVVTENALI 151
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
Y+ LV+ A K+FDE + ++D SW ++++GY R + A+ L
Sbjct: 152 DMYM--KFDDLVD-------AHKVFDE--MYERDVISWNSLLSGYARLGQMKKAKGLFHL 200
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
M V+W AMISGY G Y EA D FR+M GI+ DE + S++ + G G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+ +H Y R V NALI Y+KCG + QA ++F +M +D++SW+ ++SG
Sbjct: 261 KWIHLYAERRGFLKQT----GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 363 YINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y A F E+ + N +T+ ++S + G +E L+ F+ M+
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 149/343 (43%), Gaps = 55/343 (16%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H H+ G R + N LID+Y K ++ AH +FD+ D+ S +LLS Y+
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 83 AAGNVKLAEKLFNATPVTLRDTI-SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
G +K A+ LF+ + L TI S+ AM+ Y+ A+ F M+ G PD S
Sbjct: 187 RLGQMKKAKGLFH---LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+VL + + + E + +H + G + V N L+ Y C +++
Sbjct: 244 LISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCG---------VIS 293
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
A +LF + + KD SW+TM ISGY H
Sbjct: 294 QAIQLFGQ--MEGKDVISWSTM-------------------------------ISGYAYH 320
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQPS-EH 319
G A +TF +M ++ + T+ L+SA + G++ G R ++P EH
Sbjct: 321 GNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEH 380
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ LI + GKL +A E+ MP++ D W ++LS
Sbjct: 381 Y-----GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 174/337 (51%), Gaps = 17/337 (5%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T+ +++ + +G + A ++F+ P DT+++N M+ +YS A+ LF +++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPEL--DTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD +SF+ +L + + ++ +++ V++ G V N+L+ Y C S TL
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFG-RKIQSLVIRSGFCASLPVNNSLIDMYGKC-SDTL- 122
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
SA K+F + ++E +W +++ Y+ + +A + M +A AWN M
Sbjct: 123 -------SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIM 175
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTV 313
ISG+ G E F++M + D YT++SL++A S ++ GR +HA +L+
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+ + N++++FYTK G A + + V VSWN+I+ + E+A
Sbjct: 236 WSSA----VEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKAL 291
Query: 374 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F PE+N++TWT MI+G +G GE++L+ F +M
Sbjct: 292 EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 176/394 (44%), Gaps = 23/394 (5%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDK--TPNPDIFSRTTLLSA 80
R I + ++ +GF + + N LID+Y K S+ A+ +F + + + +LL A
Sbjct: 88 FGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFA 147
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y A + A +F P R ++N M+ ++H + + LF M F PD +
Sbjct: 148 YMNAEQFEAALDVFVEMPK--RVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCY 205
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+FS+++ A S + + + +H ++K G N++LS Y S
Sbjct: 206 TFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD-------- 257
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
+ R+L L+Q SW ++I ++ + A ++ V W MI+GY R
Sbjct: 258 DAMRELESIEVLTQ---VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+G E+A F +M G+ D + Y +++ A L G+ +H ++ Q +
Sbjct: 315 NGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY- 373
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
V NAL+ Y KCG + +A F + +DLVSWN +L + ++A ++ +
Sbjct: 374 ---VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMI 430
Query: 381 ERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ +T+ +++ + SG EE +F M
Sbjct: 431 ASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 132/327 (40%), Gaps = 48/327 (14%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S+ R +HA +L G+ +N ++ Y K + A + S ++
Sbjct: 218 SSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ A G + A ++F+ P ++ +++ M+ Y N DG A++ FV M + G
Sbjct: 278 IDACMKIGETEKALEVFHLAPE--KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D F++ VL A S +A H + +H ++ G V N L++ Y C
Sbjct: 336 DHFAYGAVLHACSGLALLG-HGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGD------- 387
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
+ A + F G + N DL V+WN M+
Sbjct: 388 --IKEADRAF------------------GDIANKDL---------------VSWNTMLFA 412
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
+ HGL ++A + M + GI+ D T+ L++ ++GL G + +++ P
Sbjct: 413 FGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPL 472
Query: 318 EHFILSVNNALITFYTKCGKLVQAREV 344
E + +I + + G L +A+++
Sbjct: 473 E---VDHVTCMIDMFGRGGHLAEAKDL 496
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 194/391 (49%), Gaps = 43/391 (10%)
Query: 39 TPLIRNRLIDIYCKSSNIPYAHH-------LFDKTPNPDIFSRTTLLSAYSAAGNVKLAE 91
+ L+ ++ CKS + Y H L ++ P S+T SA S++G+V A
Sbjct: 6 SSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEP---FVSQTLSFSALSSSGDVDYAY 62
Query: 92 KLFNATPVTLRDTISY--NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM 149
K + L D +Y N +++ +S++ + ++ ++++M R G PD ++ ++ +
Sbjct: 63 KFLS----KLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 118
Query: 150 SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDE 209
S ++ + LHC VVK G+ + NTL+ Y S ASARKLFDE
Sbjct: 119 SRLSNRKL-GGSLHCSVVKSGLEWDLFICNTLIHMY---------GSFRDQASARKLFDE 168
Query: 210 APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 269
P K+ +W +++ Y ++ D+ SAR + D M+ V W++MI GYV+ G Y +A +
Sbjct: 169 MP--HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALE 226
Query: 270 TFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV--NN 326
F +M MG + +E T S+I A + G N G+ +H Y+L H L+V
Sbjct: 227 IFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV------HLPLTVILQT 280
Query: 327 ALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
+LI Y KCG + A VF + V+ D + WNAI+ G + + E+ +F ++ E +
Sbjct: 281 SLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 340
Query: 385 ----LTWTVMISGLAESGFGEESLKLFNQMK 411
+T+ +++ + G +E+ F +K
Sbjct: 341 DPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 159/374 (42%), Gaps = 49/374 (13%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
FL + + + + L ++H ++ +G I N LI +Y + A LFD+ P+
Sbjct: 113 FLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK 172
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ + ++L AY+ +G+V A +F+ ++ RD +++++M+ Y + + A+++F +
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFD--EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R G + + + +S+I C H + G +L+ L
Sbjct: 231 MMRMGSSK-----ANEVTMVSVI------CACAHLGALNRGKTVHRYILDVHL------- 272
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
P+ + L D +W+ V+ D A+
Sbjct: 273 -------PLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETD---------------AL 310
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WNA+I G HG E+ F KM I DE T+ L++A + GL +
Sbjct: 311 MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL 370
Query: 310 LRTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW-NAILSGYINAR 367
+ +P SEH+ ++ ++ G + A + +MP++ S A+L+G IN
Sbjct: 371 KESGAEPKSEHYA-----CMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 368 RLEEAKFIFREVPE 381
LE A+ + +++ E
Sbjct: 426 NLELAETVGKKLIE 439
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 180/389 (46%), Gaps = 18/389 (4%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T R IH +L +G I N ++++Y K + A +F D S ++ Y
Sbjct: 58 TCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGY 117
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ + A KLF+ P R +SY ++K Y+ N A++LF M+ G + +
Sbjct: 118 VRSRRLWDALKLFDVMPE--RSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+TV+ A S + W C+ L +K + V LL Y C + +
Sbjct: 176 LATVISACSHLGGI-WDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC---------LCLK 225
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
ARKLFDE P +++ +W M+ GY + + A +L D +T V+W MI G +R
Sbjct: 226 DARKLFDEMP--ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+EA + +M G++ E L+SAS + + G QLH T+V+
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHG----TIVKRGFDCY 339
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
+ +I FY + A + F+ + S NA+++G++ +E+A+ +F + +
Sbjct: 340 DFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQM 410
+++ +W MISG A+S + +L LF +M
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREM 428
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 28/380 (7%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT 100
+ L+ +YC + A LFD+ P ++ + +L+ YS AG ++ AE+LF+ +T
Sbjct: 209 FVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFD--QIT 266
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ 160
+D +S+ M+ A+ + M R G P +L A S +
Sbjct: 267 EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA-SARSVGSSKGL 325
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE-PS 219
QLH +VK G C + T++ Y V + + +A + S KD S
Sbjct: 326 QLHGTIVKRGFDCYDFLQATIIHFYA-------VSNDIKLA-----LQQFEASVKDHIAS 373
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMG 278
+IAG+V+N + AR++ D +WNAMISGY + + A FR+M S
Sbjct: 374 RNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQ 433
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
++ D T S+ SA + G G++ H Y+ + + P+++ + A+I Y KCG +
Sbjct: 434 VKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN----LTAAIIDMYAKCGSI 489
Query: 339 VQAREVFDK---MPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMI 391
A +F + + + WNAI+ G + A ++ ++ + N +T+ ++
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 392 SGLAESGFGEESLKLFNQMK 411
S +G E F MK
Sbjct: 550 SACCHAGLVELGKTYFESMK 569
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E S + + ++ CGRQ+H VL++ + + + + N+++ Y KC L A
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGY----ICNSVLNMYAKCRLLADAE 96
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
VF D S+N ++ GY+ +RRL +A +F +PER+ +++T +I G A++ E
Sbjct: 97 SVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE 156
Query: 403 SLKLFNQMK 411
+++LF +M+
Sbjct: 157 AMELFREMR 165
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNA+I G HG + A D + + S+ I+ + T+ ++SA + GL G+ +
Sbjct: 510 WNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESM- 568
Query: 311 RTVVQPSEHFI---LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
S+H I + ++ K G+L +A+E+ KMPV+ D++ W +LS
Sbjct: 569 -----KSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLS 618
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 58/394 (14%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + +H+ + G ++ + LI +Y K + A +FD+ P ++ + ++ Y
Sbjct: 63 VLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY 122
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ G+ LA LF V R+T+++ M+K Y ++ A +LF RM PF
Sbjct: 123 MSNGDAVLASGLFEEISVC-RNTVTWIEMIKGYGKRIEIEKARELFERM--------PFE 173
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+V W VM L Y+ + M
Sbjct: 174 LK---------------------NVKAWSVM---------LGVYV---------NNRKME 194
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
ARK F++ P +K+ W+ M++GY R D+ AR + + V WN +I+GY ++
Sbjct: 195 DARKFFEDIP--EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G ++A D F M G + D T +S++SA +G + GR++H+ + ++ ++
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQF-- 310
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
V+NALI Y KCG L A VF+ + VR + N+++S + +EA +F +
Sbjct: 311 --VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES 368
Query: 382 RNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+L +T+ +++ GF E LK+F++MK
Sbjct: 369 LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMK 402
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 126/307 (41%), Gaps = 51/307 (16%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
++ +Y + + A F+ P + F + ++S Y G+V A +F V RD +
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF--YRVFARDLV 240
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
+N ++ Y+ N A+ F M+ +G+ PD + S++L A + + +++H
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSL 299
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
+ G+ V N L+ Y C
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCG------------------------------------ 323
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 285
DL +A + + ++ N+MIS HG +EA + F M S+ ++ DE T
Sbjct: 324 ------DLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREV 344
+ ++++A + G G ++ + + V+P+ +HF LI + GKL +A +
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF-----GCLIHLLGRSGKLKEAYRL 432
Query: 345 FDKMPVR 351
+M V+
Sbjct: 433 VKEMHVK 439
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 188/411 (45%), Gaps = 75/411 (18%)
Query: 59 AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
A LFD+ P+ +I S L+S Y G + A K+F+ P R+ +S+ A+VK Y HN
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE--RNVVSWTALVKGYVHNG 124
Query: 119 DGHAAVKLFVRMK---------------RDGFAPDPFSFSTVLGAMSLIAEEEW---HCQ 160
A LF +M +DG D ++ IA C+
Sbjct: 125 KVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 161 QLHCDVVK--WGVMCVPSVLN--TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
+ D + + M SV+ T+++ Y + V+ ARK+FD P +K
Sbjct: 185 EGRVDEAREIFDEMSERSVITWTTMVTGY---GQNNRVDD------ARKIFDVMP--EKT 233
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG------------------- 257
E SWT+M+ GYV+N + A +L + M +A NAMISG
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 258 ------------YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
+ R+G EA D F M G++ T S++S + + G+Q+
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
HA ++R + V + L+T Y KCG+LV+++ +FD+ P +D++ WN+I+SGY +
Sbjct: 354 HAQLVRCQFDVD----VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 366 ARRLEEAKFIFREVP-----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
EEA +F E+P + N +T+ +S + +G EE LK++ M+
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 116/234 (49%), Gaps = 35/234 (14%)
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
ARKLFD K SW +M+AGY N ARKL D M ++WN ++SGY+++G
Sbjct: 36 ARKLFDSC--DSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNG 93
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC--------------------- 301
+EA RK+ + + + ++T+L+ + G +
Sbjct: 94 EIDEA----RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLI 149
Query: 302 -----GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
GR A L ++ ++ ++I K G++ +ARE+FD+M R +++W
Sbjct: 150 GFLQDGRIDDACKLYEMIPDKDNI---ARTSMIHGLCKEGRVDEAREIFDEMSERSVITW 206
Query: 357 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+++GY R+++A+ IF +PE+ ++WT M+ G ++G E++ +LF M
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 163/373 (43%), Gaps = 34/373 (9%)
Query: 50 YCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
Y +++ + A +FD P S T++L Y G ++ AE+LF PV + I+ NA
Sbjct: 213 YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV--KPVIACNA 270
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEE---EWHCQQLHCDV 166
M+ + A ++F MK A S+ TV+ I E E L +
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDA----SWQTVIK----IHERNGFELEALDLFILM 322
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS-ARKLFDEAPLSQKDEPSWTTMIA 225
K GV L ++LS +C + ++L + A R FD D + ++
Sbjct: 323 QKQGVRPTFPTLISILS--VCASLASLHHGKQVHAQLVRCQFD------VDVYVASVLMT 374
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEY 284
Y++ +L ++ + D + WN++ISGY HGL EEA F +M G + +E
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTV-VQP-SEHFILSVNNALITFYTKCGKLVQAR 342
T+ + +SA G+ G +++ + V+P + H+ ++ + G+ +A
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA-----CMVDMLGRAGRFNEAM 489
Query: 343 EVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFR---EVPERNLLTWTVMISGLAESG 398
E+ D M V D W ++L +L+ A+F + E+ N T+ ++ + A G
Sbjct: 490 EMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQG 549
Query: 399 FGEESLKLFNQMK 411
+ +L MK
Sbjct: 550 RWADVAELRKLMK 562
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 43/193 (22%)
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
P+ I R + ARKL D +WN+M++GY + + +A F +M
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM--- 74
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
+ I+S N L++ Y K G+
Sbjct: 75 ---------------------------------------PDRNIISWN-GLVSGYMKNGE 94
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+ +AR+VFD MP R++VSW A++ GY++ +++ A+ +F ++PE+N ++WTVM+ G +
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD 154
Query: 398 GFGEESLKLFNQM 410
G +++ KL+ +
Sbjct: 155 GRIDDACKLYEMI 167
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 54/414 (13%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
DS T L L + +H H++ G ++N L+ +Y + A
Sbjct: 133 DSHTFP-FLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARG 191
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+FD+ D+F S+N M+ Y+ +
Sbjct: 192 VFDRRCKEDVF---------------------------------SWNLMISGYNRMKEYE 218
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
+++L V M+R+ +P + VL A S + +++ C+++H V + + N L
Sbjct: 219 ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL-CKRVHEYVSECKTEPSLRLENAL 277
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
++ Y C M A ++F + +D SWT+++ GYV +L AR D
Sbjct: 278 VNAYAACGE---------MDIAVRIF--RSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M ++W MI GY+R G + E+ + FR+M S G+ DE+T S+++A + G
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G + Y+ + ++ + V NALI Y KCG +A++VF M RD +W A++
Sbjct: 387 GEWIKTYIDKNKIKND----VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 362 GYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
G N + +EA +F ++ + ++ +T+ ++S SG +++ K F +M+
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 167/390 (42%), Gaps = 83/390 (21%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCK--SSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ +H+ +T G P + +L +C ++ YA+ LF K P PD+
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDV----------- 99
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSH-NLDGHAAVKLFVRMKRDGFAPDPFS 141
+ +N M+K +S + DG V+L++ M ++G PD +
Sbjct: 100 ----------------------VVWNNMIKGWSKVDCDGEG-VRLYLNMLKEGVTPDSHT 136
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F +L + ++LHC VVK+G+ V N L+ Y C LM
Sbjct: 137 FPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG---------LMD 187
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
AR +FD ++D SW MI+GY R +
Sbjct: 188 MARGVFDRR--CKEDVFSWNLMISGYNRMKE----------------------------- 216
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
YEE+ + +M + T ++SA + +++H YV +PS
Sbjct: 217 --YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPS---- 270
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
L + NAL+ Y CG++ A +F M RD++SW +I+ GY+ L+ A+ F ++P
Sbjct: 271 LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPV 330
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
R+ ++WT+MI G +G ESL++F +M+
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQ 360
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 57/346 (16%)
Query: 21 QTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
+ L + +H ++ + + N L++ Y + A +F D+ S T+++
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y GN+KLA F+ PV RD IS+ M+ Y + ++++F M+ G PD F
Sbjct: 312 YVERGNLKLARTYFDQMPV--RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 141 SFSTVLGAMSLIAE---EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
+ +VL A + + EW + + +K V+ V N L+ Y C S
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV----VGNALIDMYFKCGCSE----- 420
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
A+K+F + + Q+D+ +WT M+ G N
Sbjct: 421 ----KAQKVFHD--MDQRDKFTWTAMVVGLANN--------------------------- 447
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQP 316
G +EA F +M M IQ D+ TY ++SA ++G+ + R+ A + ++P
Sbjct: 448 ----GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
S L ++ + G + +A E+ KMP+ + + W A+L
Sbjct: 504 S----LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLG 545
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 192/410 (46%), Gaps = 54/410 (13%)
Query: 16 HPSAT-QTLARAIHAHILTTGFRLTPLIR---------NRLIDIYCKSSNIPYAHHLFDK 65
H +A +L RA I + + PL++ N I Y ++ A +F +
Sbjct: 32 HGAANFHSLKRATQTQIQKS--QTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKR 89
Query: 66 TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVK 125
P S ++S Y G +LA KLF+ P RD +S+N M+K Y N + A +
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE--RDLVSWNVMIKGYVRNRNLGKARE 147
Query: 126 LFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS----VLNTL 181
LF M D S++T+L + Q D + +P N L
Sbjct: 148 LFEIMPE----RDVCSWNTMLSG---------YAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
LS Y+ ++ +E ++ +R+ + SW ++ G+V+ + AR+ D
Sbjct: 195 LSAYV---QNSKMEEACMLFKSRENWALV--------SWNCLLGGFVKKKKIVEARQFFD 243
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M V+WN +I+GY + G +EA R++ D +T+T+++S +
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
R+L + P + + NA++ Y + ++ A+E+FD MP R++ +WN +++
Sbjct: 300 ARELFDKM------PERNEVSW--NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
GY ++ EAK +F ++P+R+ ++W MI+G ++SG E+L+LF QM+
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 183/403 (45%), Gaps = 65/403 (16%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y ++ N+ A LF+ P D+ S T+LS Y+ G V A +F+ P ++
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE--KN 187
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM---SLIAEEEWHCQ 160
+S+NA++ AY N A LF R+ +A S++ +LG I E
Sbjct: 188 DVSWNALLSAYVQNSKMEEACMLF--KSRENWAL--VSWNCLLGGFVKKKKIVEARQFFD 243
Query: 161 QLHC-DVVKWGVMCVPSVLNTLLSCY-----ICCASSTLVESPV---------------- 198
++ DVV W NT+++ Y I A ESPV
Sbjct: 244 SMNVRDVVSW---------NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 199 -LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
++ AR+LFD+ P +++E SW M+AGYV+ + + A++L D M WN MI+G
Sbjct: 295 RMVEEARELFDKMP--ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQP 316
Y + G EA + F KM + D ++ ++I+ +G H++ LR VQ
Sbjct: 353 YAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSG--------HSFEALRLFVQM 400
Query: 317 SEH--------FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
F +++ + GK + R V V NA+L Y
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG-NALLLMYCKCGS 459
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EEA +F+E+ +++++W MI+G + GFGE +L+ F MK
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 43/203 (21%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H ++ G+ + N L+ +YCK +I A+ LF +
Sbjct: 427 LGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG-------------- 472
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+D +S+N M+ YS + G A++ F MKR+G PD +
Sbjct: 473 -------------------KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATM 513
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
VL A S + Q + +GVM P+ + Y C L+ L+
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVM--PNSQH-----YACMVD--LLGRAGLLED 564
Query: 203 ARKLFDEAPLSQKDEPSWTTMIA 225
A L P + D W T++
Sbjct: 565 AHNLMKNMPF-EPDAAIWGTLLG 586
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 184/376 (48%), Gaps = 41/376 (10%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
++ Y +S + A LF + P ++ S T++ Y+ +G + A +LF+ P R+ +
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE--RNIV 172
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC- 164
S+N+MVKA A+ LF RM R D S++ ++ ++ + + + C
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 165 ---DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
+++ W M N + A +LF P ++D SW
Sbjct: 229 PERNIISWNAMITGYAQNNRID------------------EADQLFQVMP--ERDFASWN 268
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQ 280
TMI G++RN ++ A L D M ++W MI+GYV + EEA + F KM G ++
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ TY S++SA + G+Q+H + ++V Q +E V +AL+ Y+K G+L+
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE----IVTSALLNMYSKSGELIA 384
Query: 341 AREVFDKMPV--RDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGL 394
AR++FD V RDL+SWN++++ Y + +EA ++ ++ + +T+ ++
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 395 AESGFGEESLKLFNQM 410
+ +G E+ ++ F +
Sbjct: 445 SHAGLVEKGMEFFKDL 460
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 36/238 (15%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
M AR+LFD S+K+ +WT M++GY+R+ L+ A L M V+WN MI GY
Sbjct: 93 MREARELFDRVD-SRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYA 151
Query: 260 RHGLYEEAFDTFRKMHSMGI---------------------------QMDEYTYTSLISA 292
+ G ++A + F +M I + D ++T+++
Sbjct: 152 QSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDG 211
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
G + R+L + E I+S NA+IT Y + ++ +A ++F MP RD
Sbjct: 212 LAKNGKVDEARRLFDCM-------PERNIISW-NAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
SWN +++G+I R + +A +F +PE+N+++WT MI+G E+ EE+L +F++M
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 114/207 (55%), Gaps = 13/207 (6%)
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
R ++ + + +P W +I + +A ARKL DG+ V W +I+GY++ G
Sbjct: 35 RSIYSSSSRPRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGD 92
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
EA + F ++ S + + T+T+++S + + L + E ++S
Sbjct: 93 MREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQ-------EMPERNVVS 142
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
N +I Y + G++ +A E+FD+MP R++VSWN+++ + R++EA +F +P R+
Sbjct: 143 W-NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQM 410
+++WT M+ GLA++G +E+ +LF+ M
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCM 228
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 170/405 (41%), Gaps = 53/405 (13%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N ++ + I A +LF++ P D+ S T ++ + G V A +LF+ P R+
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPE--RN 232
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC---- 159
IS+NAM+ Y+ N A +LF M FA S++T++ E C
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFD 288
Query: 160 QQLHCDVVKWGVMCVPSVLN------------------------TLLSCYICCAS-STLV 194
+ +V+ W M V N T +S C+ + LV
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV 348
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG--MTHPIAVAWN 252
E + K + QK+E + ++ Y ++ +L +ARK+ D + ++WN
Sbjct: 349 EGQQIHQLISK-----SVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
+MI+ Y HG +EA + + +M G + TY +L+ A + GL G + ++R
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 313 VVQP--SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRL 369
P EH+ L+ + G+L + R S + AILS +
Sbjct: 464 ESLPLREEHY-----TCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEV 518
Query: 370 EEAKFIFREVPE---RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
AK + ++V E + T+ +M + A +G EE+ ++ +MK
Sbjct: 519 SIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMK 563
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 43/162 (26%)
Query: 284 YTYTSLISASFN---TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
Y +S+ +S N LFN R +++ R V E LI K GK+ +
Sbjct: 13 YKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEW--------LIGELCKVGKIAE 64
Query: 341 AREVFDKMPVRD--------------------------------LVSWNAILSGYINARR 368
AR++FD +P RD +V+W A++SGY+ +++
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQ 124
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
L A+ +F+E+PERN+++W MI G A+SG +++L+LF++M
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 163/337 (48%), Gaps = 51/337 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+ L+ Y++ G ++A ++F+ ++N+++ Y+ A+ L+ +M DG
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD F+F VL A I + + +H D+VK G VLN L+ Y C
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQI-GEAIHRDLVKEGFGYDVYVLNALVVMYAKCG----- 244
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
D+ AR + D + H V+WN+M
Sbjct: 245 -------------------------------------DIVKARNVFDMIPHKDYVSWNSM 267
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
++GY+ HGL EA D FR M GI+ D+ +S+++ + F GRQLH +V+R +
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGM 324
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAK 373
+ + LSV NALI Y+K G+L QA +FD+M RD VSWNAI+S + N+ L+ +
Sbjct: 325 E----WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFE 380
Query: 374 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ R + + +T+ ++S A +G E+ +LF+ M
Sbjct: 381 QMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 53/346 (15%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQ 161
D +N +V+ YS + + H +V +FV M R GF PD FSF+ V+ A+ Q
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ- 127
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
+HC +K G+ V TL+ Y C ARK+FDE + Q + +W
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEF---------ARKVFDE--MHQPNLVAWN 176
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR--------------------- 260
+I R +D+A AR++ D M +WN M++GY++
Sbjct: 177 AVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVS 236
Query: 261 ----------HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+G + E+F FR++ G+ +E + T ++SA +G F G+ LH +V
Sbjct: 237 WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM-PVRDLVSWNAILSGYINARRL 369
+ +I+SVNNALI Y++CG + AR VF+ M R +VSW ++++G +
Sbjct: 297 KA----GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQG 352
Query: 370 EEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
EEA +F E+ + +++ ++ + +G EE F++MK
Sbjct: 353 EEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTS 288
+D L AR+LL P A +N ++ GY + F +M G D +++
Sbjct: 52 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAF 111
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG------------ 336
+I A N G Q+H L+ ++ L V LI Y CG
Sbjct: 112 VIKAVENFRSLRTGFQMHCQALKHGLESH----LFVGTTLIGMYGGCGCVEFARKVFDEM 167
Query: 337 -------------------KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ ARE+FDKM VR+ SWN +L+GYI A LE AK IF
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 378 EVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E+P R+ ++W+ MI G+A +G ES F +++
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQ 261
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 57/362 (15%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I + +++ A +FDK + S +L+ Y AG ++ A+++F+ P RD
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMP--HRD 233
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+S++ M+ +HN + + F ++R G +P+ S + VL A S E+ + LH
Sbjct: 234 DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILH 292
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
V K G + SV N L+ Y C + P+
Sbjct: 293 GFVEKAGYSWIVSVNNALIDMYSRCGN-------------------VPM----------- 322
Query: 224 IAGYVRNDDLASARKLLDGMTHP-IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
AR + +GM V+W +MI+G HG EEA F +M + G+ D
Sbjct: 323 ------------ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQ 340
++ SL+ A + GL G + + R ++P EH+ ++ Y + GKL +
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY-----GCMVDLYGRSGKLQK 425
Query: 341 AREVFDKMPV-RDLVSWNAIL---SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 396
A + +MP+ + W +L S + N E+ K E+ N ++ + A
Sbjct: 426 AYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYAT 485
Query: 397 SG 398
+G
Sbjct: 486 AG 487
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 8 NLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
N LA NH TQ + +T N I + ++ N+ A +F +
Sbjct: 22 NSTLAVSNHEPITQKTRNFLETTTTSTAI----FQCNSQISKHARNGNLQEAEAIFRQMS 77
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN-LDGHAAVKL 126
N I S ++SAY+ G + A ++F+ PV R T SYNAM+ A N D A +L
Sbjct: 78 NRSIVSWIAMISAYAENGKMSKAWQVFDEMPV--RVTTSYNAMITAMIKNKCDLGKAYEL 135
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
F + + S++T++ + + L+ + V S N LLS Y+
Sbjct: 136 FCDIPE----KNAVSYATMITGFVRAGRFD-EAEFLYAETPVKFRDSVAS--NVLLSGYL 188
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
A ++F ++ K+ S ++M+ GY + + AR L D MT
Sbjct: 189 RAGKWN---------EAVRVFQ--GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER 237
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQL 305
+ W AMI GY + G +E+ F F +M G ++++ T + A + + G Q+
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI 297
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H V R ++ F L + N+L++ Y+K G + +A+ VF M +D VSWN++++G +
Sbjct: 298 HGLVSRMPLE----FDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQ 353
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+++ EA +F ++P +++++WT MI G + G + ++LF M
Sbjct: 354 RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 176/397 (44%), Gaps = 40/397 (10%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N L+ Y ++ A +F ++ S ++++ Y G + A LF+ +T R+
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDR--MTERN 238
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEE---EWHCQ 160
I++ AM+ Y LF+RM+++G D S L M +
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEG---DVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYI-------------------CCASSTLVESPVL-- 199
Q+H V + + + N+L+S Y + ++L+ V
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 200 -MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
++ A +LF++ P KD SWT MI G+ +++ +L M + W AMIS +
Sbjct: 356 QISEAYELFEKMP--GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
V +G YEEA F KM + + YT++S++SA+ + G Q+H V++ +
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND- 472
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY----INARRLEEAKF 374
LSV N+L++ Y KCG A ++F + ++VS+N ++SGY + L+
Sbjct: 473 ---LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ E N +T+ ++S G+ + K F MK
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 11/201 (5%)
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL-YEEAFDT 270
+S + SW MI+ Y N ++ A ++ D M + ++NAMI+ +++ +A++
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYEL 135
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
F + + + +Y ++I+ G F+ L+A P + +N L++
Sbjct: 136 FCDIP----EKNAVSYATMITGFVRAGRFDEAEFLYAET------PVKFRDSVASNVLLS 185
Query: 331 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 390
Y + GK +A VF M V+++VS ++++ GY R+ +A+ +F + ERN++TWT M
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 391 ISGLAESGFGEESLKLFNQMK 411
I G ++GF E+ LF +M+
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMR 266
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N LI + I A+ LF+K P D+ S T ++ +S G + +LF P +D
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPE--KD 402
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
I++ AM+ A+ N A+ F +M + P+ ++FS+VL A + +A + Q+H
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA-DLIEGLQIH 461
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
VVK ++ SV N+L+S Y C ++ A K+F + +S+ + S+ TM
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTN---------DAYKIF--SCISEPNIVSYNTM 510
Query: 224 IAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
I+GY N A KL + P V + A++S V G + + F+ M S
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 186/373 (49%), Gaps = 22/373 (5%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y K N A LFD P D+ S T +++ ++ +++ A K F+ P +
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPE--KS 228
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+S+NAM+ Y+ N A++LF M R G P+ ++ V+ A S A+ L
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP-----SLT 283
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+VK + L+C++ A + + SAR++F+E +Q++ +W M
Sbjct: 284 RSLVK-----LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELG-TQRNLVTWNAM 337
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMD 282
I+GY R D++SAR+L D M V+WN++I+GY +G A + F M G + D
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPD 397
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E T S++SA + G + Y+ + ++ ++ S +LI Y + G L +A+
Sbjct: 398 EVTMISVLSACGHMADLELGDCIVDYIRKNQIKLND----SGYRSLIFMYARGGNLWEAK 453
Query: 343 EVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIFR---EVPERNLLTWTVMISGLAESG 398
VFD+M RD+VS+N + + + N +E + + E E + +T+T +++ +G
Sbjct: 454 RVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Query: 399 FGEESLKLFNQMK 411
+E ++F ++
Sbjct: 514 LLKEGQRIFKSIR 526
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 53/344 (15%)
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
VT + N+M K +S + ++L+ + R G PD FSF V+ +
Sbjct: 66 VTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFG----- 120
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP 218
V K G P V N ++ Y+ S + SARK+FD+ +SQ+
Sbjct: 121 -ILFQALVEKLGFFKDPYVRNVIMDMYVKHES---------VESARKVFDQ--ISQRKGS 168
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI----------------------- 255
W MI+GY + + A KL D M V+W MI
Sbjct: 169 DWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 256 --------SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
SGY ++G E+A F M +G++ +E T+ +ISA F L
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC----SFRADPSLTR 284
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINA 366
+++ + + V AL+ + KC + AR +F+++ R+LV+WNA++SGY
Sbjct: 285 SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRI 344
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ A+ +F +P+RN+++W +I+G A +G +++ F M
Sbjct: 345 GDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
R + D +T P N+M + + + + + + GI D +++ +I ++
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILS-VNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+ + + +V+ F V N ++ Y K + AR+VFD++ R
Sbjct: 120 GI----------LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSD 169
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
WN ++SGY EEA +F +PE ++++WTVMI+G A+ E + K F++M
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRM 224
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 188/406 (46%), Gaps = 75/406 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N IF++ ++SA SA G + A KLF+ P D+ N+M+KAY + L+
Sbjct: 9 NVQIFTKFLVISA-SAVG-IGYARKLFDQRP-QRDDSFLSNSMIKAYLETRQYPDSFALY 65
Query: 128 VRMKRDG-FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT------ 180
++++ FAPD F+F+T+ + SL + + QLH + ++G C ++T
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCSL-SMCVYQGLQLHSQIWRFG-FCADMYVSTGVVDMY 123
Query: 181 --------------------------LLSCYICCASSTL----------VESPVL----- 199
L+S YI C L V+ V+
Sbjct: 124 AKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMM 183
Query: 200 --------MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
M SAR+LFDE ++ K +WTTMI GY D+ +ARKL D M V+W
Sbjct: 184 DGFVKSGDMTSARRLFDE--MTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 252 NAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
N MI GY ++ +E F++M + + D+ T S++ A +TG + G H +V
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI---NAR 367
R + + V A++ Y+KCG++ +A+ +FD+MP + + SWNA++ GY NAR
Sbjct: 302 RKKLDKK----VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 368 RLEE--AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ + E P+ +T +I+ G EE K F+ M+
Sbjct: 358 AALDLFVTMMIEEKPDE--ITMLAVITACNHGGLVEEGRKWFHVMR 401
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 24/258 (9%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT 100
+I N ++D + KS ++ A LFD+ + + + TT++ Y ++ A KLF+A P
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE- 235
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFSFSTVLGAMS---LIAEEE 156
R+ +S+N M+ Y N ++LF M+ PD + +VL A+S ++ E
Sbjct: 236 -RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 157 WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
W HC V + + V +L Y C + A+++FDE P +K
Sbjct: 295 W----CHCFVQRKKLDKKVKVCTAILDMYSKCGE---------IEKAKRIFDEMP--EKQ 339
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGM---THPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
SW MI GY N + +A L M P + A+I+ GL EE F
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHV 399
Query: 274 MHSMGIQMDEYTYTSLIS 291
M MG+ Y ++
Sbjct: 400 MREMGLNAKIEHYGCMVD 417
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 158/351 (45%), Gaps = 49/351 (13%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
HL +P P IF + AY G V A +LF P RD S+NA++ A + N
Sbjct: 86 HLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPE--RDGGSWNAVITACAQNGVS 143
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
++F RM RDG SF+ VL + LI + +QLHC VVK+G + +
Sbjct: 144 DEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRL-LRQLHCAVVKYGYSGNVDLETS 202
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
++ Y C +M+ AR++FDE
Sbjct: 203 IVDVYGKCR---------VMSDARRVFDE------------------------------- 222
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
+ +P V+WN ++ Y+ G +EA F KM + ++ +T +S++ A +
Sbjct: 223 --IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALE 280
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
G+ +HA ++ V V+ ++ Y KC +L AR VFD+ +DL SW + +
Sbjct: 281 VGKVIHAIAVKLSVVADT----VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAM 336
Query: 361 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
SGY + EA+ +F +PERN+++W M+ G + +E+L M+
Sbjct: 337 SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 147/355 (41%), Gaps = 50/355 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +H ++ G+ + ++D+Y K + A +FD+ NP
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPS------------ 227
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+S+N +V+ Y AV +F +M P +
Sbjct: 228 ---------------------DVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTV 266
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S+V+ A S E + +H VK V+ V ++ Y+ C + S
Sbjct: 267 SSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDR---------LES 316
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR++FD+ KD SWT+ ++GY + AR+L D M V+WNAM+ GYV
Sbjct: 317 ARRVFDQT--RSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAH 374
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
++EA D M +D T +++ G+Q H ++ R + +
Sbjct: 375 EWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN----V 430
Query: 323 SVNNALITFYTKCGKLVQAREVFDKM-PVRDLVSWNAILSGYINARRLEEAKFIF 376
V NAL+ Y KCG L A F +M +RD VSWNA+L+G R E+A F
Sbjct: 431 IVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 174/419 (41%), Gaps = 63/419 (15%)
Query: 6 MANLFLAQLNHPSATQTLA----------RAIHAHILTTGFRLTPLIRNRLIDIYCKSSN 55
M L + LNH ++ LA + IHA + ++ + D+Y K
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 56 IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
+ A +FD+T + D+ S T+ +S Y+ +G + A +LF+ P R+ +S+NAM+ Y
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE--RNIVSWNAMLGGYV 371
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
H + A+ M+++ D + +L S I++ + +Q H + + G
Sbjct: 372 HAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG-KQAHGFIYRHGYDTNV 430
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
V N LL Y C + + SA F + +DE SW
Sbjct: 431 IVANALLDMYGKCGT---------LQSANIWFRQMS-ELRDEVSW--------------- 465
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
NA+++G R G E+A F M + + +YT +L++ N
Sbjct: 466 ----------------NALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCAN 508
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
N G+ +H +++R + + + A++ Y+KC A EVF + RDL+
Sbjct: 509 IPALNLGKAIHGFLIRDGYKID----VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLIL 564
Query: 356 WNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
WN+I+ G R +E +F E + + +T+ ++ G E + F+ M
Sbjct: 565 WNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSM 623
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 54/349 (15%)
Query: 39 TPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATP 98
T L N L+ KS + A +FDK P D F+ T++ AYS + + AEKLF + P
Sbjct: 27 TKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNP 86
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL---GAMSLIAEE 155
V ++TIS+NA++ Y + A LF M+ DG P+ ++ +VL ++ L+
Sbjct: 87 V--KNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 156 EWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK 215
E Q+H +K G +V+N LL+ Y C ++ A LF E +K
Sbjct: 145 E----QIHGHTIKTGFDLDVNVVNGLLAMYAQCKR---------ISEAEYLF-ETMEGEK 190
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ +WT+M+ GY +N G +A + FR +
Sbjct: 191 NNVTWTSMLTGYSQN-------------------------------GFAFKAIECFRDLR 219
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G Q ++YT+ S+++A + G Q+H ++++ + + + V +ALI Y KC
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN----IYVQSALIDMYAKC 275
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
++ AR + + M V D+VSWN+++ G + + EA +F + ER++
Sbjct: 276 REMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 158/391 (40%), Gaps = 86/391 (21%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H I+ +GF+ +++ LID+Y K + A L +
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE---------------------- 286
Query: 87 VKLAEKLFNATPVTLRDTISYNAM-VKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
+ + D +S+N+M V L G A + +F RM D F+ ++
Sbjct: 287 -----------GMEVDDVVSWNSMIVGCVRQGLIGEA-LSMFGRMHERDMKIDDFTIPSI 334
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
L +L E HC +VK G V N L+ Y + R
Sbjct: 335 LNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY----------------AKRG 378
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE 265
+ D SA K+ +GM ++W A+++G +G Y+
Sbjct: 379 IMD--------------------------SALKVFEGMIEKDVISWTALVTGNTHNGSYD 412
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
EA F M GI D+ S++SAS L G+Q+H +++ S LSVN
Sbjct: 413 EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSS----LSVN 468
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
N+L+T YTKCG L A +F+ M +RDL++W ++ GY LE+A+ F + +
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGI 528
Query: 386 T-----WTVMISGLAESGFGEESLKLFNQMK 411
T + MI SG + +L +QM+
Sbjct: 529 TPGPEHYACMIDLFGRSGDFVKVEQLLHQME 559
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 40/211 (18%)
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR++FD+ P ++DE +W TMI Y + L+ A KL ++WNA+ISGY + G
Sbjct: 47 ARQMFDKMP--ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSG 104
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EAF+ F +M S GI+ +EYT S++ + L G Q+H + ++T F L
Sbjct: 105 SKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT------GFDL 158
Query: 323 SVN--NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
VN N L+ Y +C ++ +A +F+ M
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETME------------------------------G 188
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E+N +TWT M++G +++GF ++++ F ++
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLR 219
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G +H+Y RT + +N L+ +K G++ +AR++FDKMP RD +WN ++
Sbjct: 17 GSCIHSYADRTKLH---------SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIV 67
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y N+RRL +A+ +FR P +N ++W +ISG +SG E+ LF +M+
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 68/341 (19%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+A + H I+ TG+ L+ N L+D+Y K + A +F+
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFE------------------ 388
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G ++ +D IS+ A+V +HN A+KLF M+ G PD
Sbjct: 389 --GMIE-------------KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++VL A + + E+ QQ+H + +K G SV N+L++ Y C S +
Sbjct: 434 ASVLSASAELTLLEFG-QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS---------LED 483
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA-----WNAMISG 257
A +F+ + +D +WT +I GY +N L A++ D M + + MI
Sbjct: 484 ANVIFNSMEI--RDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDL 541
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
+ R G + + +H M ++ D + ++++AS G G + +T+++
Sbjct: 542 FGRSGDF---VKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGER----AAKTLME-- 592
Query: 318 EHFILSVNNA-----LITFYTKCGKLVQAREVFDKMPVRDL 353
L NNA L Y+ G+ +A V M R++
Sbjct: 593 ----LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 39/400 (9%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y ++ + A LF ++ + T+++ Y G+V+ A +LF P R+
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE--RN 261
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP-----FSFSTVLGAMSLIAEEEWH 158
+S+ AM+ ++ N A+ LF+ MK+D A P S + G + + E
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV--EFRRL 319
Query: 159 CQQLHCDVVKWGVMCVP---SVLNTLLSCY-----ICCASSTLVESPVL----------- 199
+QLH V+ G V + +L+ Y I A S L ES L
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYL 379
Query: 200 ----MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ A LF+ S D+ SWT+MI GY+ D++ A L + V W MI
Sbjct: 380 KNGDLERAETLFERVK-SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
SG V++ L+ EA M G++ TY+ L+S++ T + G+ +H + +T
Sbjct: 439 SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC 498
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
IL N+L++ Y KCG + A E+F KM +D VSWN+++ G + ++A +
Sbjct: 499 YDPDLIL--QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNL 556
Query: 376 FREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
F+E+ + N +T+ ++S + SG L+LF MK
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 174/403 (43%), Gaps = 66/403 (16%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
L+ Y K+ + A LF+ P +I + +L+ Y + A LF P ++ +
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP---KNVV 139
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC- 164
S+ M+ A + AV+LF M + S++T++ + + E Q
Sbjct: 140 SWTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 165 ---DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
DVV W N ++ YI M A+ LF + +S+K+ +WT
Sbjct: 196 PSRDVVSW---------NAMIKGYI---------ENDGMEEAKLLFGD--MSEKNVVTWT 235
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
+M+ GY R D+ A +L M V+W AMISG+ + LY EA F +M +
Sbjct: 236 SMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK-DVDA 294
Query: 282 DEYTYTSLISASFNTGLFNC-----GRQLHAYVLRTVVQPSEH----------------- 319
+LIS ++ G G QLHA V+ + +H
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 320 -----------FILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINAR 367
F L N +I Y K G L +A +F+++ + D VSW +++ GY+ A
Sbjct: 355 IASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAG 414
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ A +F+++ +++ +TWTVMISGL ++ E+ L + M
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 19/215 (8%)
Query: 200 MASARKLFDEAPLSQKDEPS----WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ AR L D+ P Q+ + WT++++ Y + L AR L + M V NAM+
Sbjct: 58 LVHARHLLDKIP--QRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+GYV+ EA+ FR+M + ++T +++A L + GR A L +
Sbjct: 116 TGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTA-----LCDDGRSEDAVELFD--E 163
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
E ++S N L+T + G + +A++VFD MP RD+VSWNA++ GYI +EEAK +
Sbjct: 164 MPERNVVSWNT-LVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLL 222
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
F ++ E+N++TWT M+ G G E+ +LF +M
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 36/124 (29%)
Query: 322 LSVNNALITFYTKCGKLVQAREVFDK---------------------------------- 347
S ALI G LV AR + DK
Sbjct: 42 FSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFE 101
Query: 348 -MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
MP R++V+ NA+L+GY+ RR+ EA +FRE+P +N+++WTVM++ L + G E++++L
Sbjct: 102 VMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVEL 160
Query: 407 FNQM 410
F++M
Sbjct: 161 FDEM 164
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 170/342 (49%), Gaps = 31/342 (9%)
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA--AVKLFVRMKRDGFA-PDPFSF 142
++ A K+FN P R+ S+N +++ +S + + A A+ LF M D F P+ F+F
Sbjct: 74 DLDYAHKIFNQMP--QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTF 131
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA----------SST 192
+VL A + + + +Q+H +K+G V++ L+ Y+ C +
Sbjct: 132 PSVLKACAKTGKIQ-EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ + V+M RK E L W MI GY+R D +AR L D M V+WN
Sbjct: 191 IEKDMVVMTDRRKRDGEIVL-------WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWN 243
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
MISGY +G +++A + FR+M I+ + T S++ A G G LH Y +
Sbjct: 244 TMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
++ + + +ALI Y+KCG + +A VF+++P ++++W+A+++G+ + +A
Sbjct: 304 GIRIDD----VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDA 359
Query: 373 KFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
F ++ + + + + +++ + G EE + F+QM
Sbjct: 360 IDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 57/267 (21%)
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYIC--CASSTLVESPVLMASARKLFDEAPLSQKDEP 218
Q+H +K G M +TL + I CA+S L + A K+F++ P Q++
Sbjct: 41 QIHAVFIKSGQM-----RDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMP--QRNCF 91
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
SW T+I G+ +D+ + IA+ YE D F
Sbjct: 92 SWNTIIRGFSESDEDKAL----------IAITL-----------FYEMMSDEF------- 123
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
++ + +T+ S++ A TG G+Q+H L+ E F++S L+ Y CG +
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDE-FVMS---NLVRMYVMCGFM 179
Query: 339 VQAREVFDKMPVR--------------DLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
AR +F K + ++V WN ++ GY+ + A+ +F ++ +R++
Sbjct: 180 KDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV 239
Query: 385 LTWTVMISGLAESGFGEESLKLFNQMK 411
++W MISG + +GF ++++++F +MK
Sbjct: 240 VSWNTMISGYSLNGFFKDAVEVFREMK 266
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 60/372 (16%)
Query: 51 CKSSNIPYAH-----HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
C S ++P + H+ + F T L+S Y G V A K+F P + + ++
Sbjct: 63 CASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSV 122
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL--IAEEEWHCQQLH 163
YNA++ Y+ N A +F RMK G + D T+LG + L + E W + LH
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSV---TMLGLVPLCTVPEYLWLGRSLH 179
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
VK G+ +VLN+ ++ Y+ C S + + R+LFDE P+ K +W +
Sbjct: 180 GQCVKGGLDSEVAVLNSFITMYMKCGS---------VEAGRRLFDEMPV--KGLITWNAV 228
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+GY +N GL + + + +M S G+ D
Sbjct: 229 ISGYSQN-------------------------------GLAYDVLELYEQMKSSGVCPDP 257
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
+T S++S+ + G G ++ V P+ + V+NA I+ Y +CG L +AR
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN----VFVSNASISMYARCGNLAKARA 313
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGF 399
VFD MPV+ LVSW A++ Y E +F ++ +R + + +++S + SG
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373
Query: 400 GEESLKLFNQMK 411
++ L+LF MK
Sbjct: 374 TDKGLELFRAMK 385
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 108/244 (44%), Gaps = 51/244 (20%)
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
++ L+ M R G +PD FSF +L ++SL QQLHC V K G P VL
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSG----QQLHCHVTKGGCETEPFVLT 92
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
L+S Y C L+A ARK+F+E P S + + +I+GY N + A +
Sbjct: 93 ALISMYCKCG---------LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYM 143
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
FR+M G+ +D T L+
Sbjct: 144 -------------------------------FRRMKETGVSVDSVTMLGLVPLCTVPEYL 172
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
GR LH ++ + ++V N+ IT Y KCG + R +FD+MPV+ L++WNA+
Sbjct: 173 WLGRSLHGQCVKGGLDSE----VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAV 228
Query: 360 LSGY 363
+SGY
Sbjct: 229 ISGY 232
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 55/334 (16%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+ ++ Y G+V+ +LF+ PV + I++NA++ YS N + ++L+ +MK G
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPV--KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGV 253
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PDPF+ +VL + C L + V LVE
Sbjct: 254 CPDPFTLVSVLSS----------CAHLGAKKIGHEV-------------------GKLVE 284
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
S + + A +S Y R +LA AR + D M V+W AMI
Sbjct: 285 SNGFVPNV--FVSNASISM------------YARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-V 314
Y HG+ E F M GI+ D + ++SA ++GL + G +L + R +
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 315 QPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEA 372
+P EH+ + L+ + G+L +A E + MPV D W A+L + ++ A
Sbjct: 391 EPGPEHY-----SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMA 445
Query: 373 KFIFREVP--ERNLLTWTVMISGLAESGFGEESL 404
+ F +V E N + + V++S + +E +
Sbjct: 446 ELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGI 479
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 16/174 (9%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
++ +VRN +A+ + WN + L+ E+ +R M G D
Sbjct: 3 VVTSFVRNSAVAAV----------ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPD 52
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+++ ++ + + L G+QLH +V + + +E F+L+ ALI+ Y KCG + AR
Sbjct: 53 AFSFPFILKSCASLSLPVSGQQLHCHVTKGGCE-TEPFVLT---ALISMYCKCGLVADAR 108
Query: 343 EVFDKMPVRDLVS--WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
+VF++ P +S +NA++SGY ++ +A ++FR + E + +V + GL
Sbjct: 109 KVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 159/360 (44%), Gaps = 82/360 (22%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H ++L +G L + N LID+YCK A+ +FD P
Sbjct: 28 VHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE------------------ 69
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
R+ +S++A++ + N D ++ LF M R G P+ F+FST L
Sbjct: 70 ---------------RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNL 114
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A L+ E Q+H +K G + V N+L+ Y C + A K+
Sbjct: 115 KACGLLNALE-KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR---------INEAEKV 164
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F R+++D ++WNAMI+G+V G +
Sbjct: 165 F-----------------------------RRIVD----RSLISWNAMIAGFVHAGYGSK 191
Query: 267 AFDTFRKMHSMGIQM--DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ-PSEHFILS 323
A DTF M I+ DE+T TSL+ A +TG+ G+Q+H +++R+ PS +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS---AT 248
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
+ +L+ Y KCG L AR+ FD++ + ++SW++++ GY EA +F+ + E N
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 53/342 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+L+ YS G + AEK+F + R IS+NAM+ + H G A+ F M+
Sbjct: 146 NSLVDMYSKCGRINEAEKVFR--RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 135 FA--PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
PD F+ +++L A S + +Q+H +V+ G C PS S+T
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMI-YAGKQIHGFLVRSGFHC-PS-------------SAT 248
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
+ S V + YV+ L SARK D + ++W+
Sbjct: 249 ITGSLVDL--------------------------YVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
++I GY + G + EA F+++ + Q+D + +S+I + L G+Q+ A ++
Sbjct: 283 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL 342
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
PS SV N+++ Y KCG + +A + F +M ++D++SW +++GY +++
Sbjct: 343 ---PS-GLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398
Query: 373 KFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
IF E+ N+ + + ++S + SG +E +LF+++
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I Y + + A K+ D M V+W+A++SG+V +G + + F +M GI +
Sbjct: 47 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 106
Query: 283 EYTYTSLISASFNTGLFNC---GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
E+T+++ + A GL N G Q+H + L+ + ++ V N+L+ Y+KCG++
Sbjct: 107 EFTFSTNLKA---CGLLNALEKGLQIHGFCLKIGFE----MMVEVGNSLVDMYSKCGRIN 159
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
+A +VF ++ R L+SWNA+++G+++A +A F + E N+
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/456 (21%), Positives = 176/456 (38%), Gaps = 130/456 (28%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN------------------ 68
IH L GF + + N L+D+Y K I A +F + +
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 69 -------------------PDIFSRTTLLSAYSAAGNVKLAEK----------------- 92
PD F+ T+LL A S+ G + ++
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 93 --------------LFNATP----VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
LF+A + + IS+++++ Y+ + A+ LF R++
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
D F+ S+++G + A +Q+ VK SVLN+++ Y+ C
Sbjct: 309 SQIDSFALSSIIGVFADFALLR-QGKQMQALAVKLPSGLETSVLNSVVDMYLKCG----- 362
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
L+ A K F E L KD SWT +
Sbjct: 363 ----LVDEAEKCFAEMQL--KDVISWTVV------------------------------- 385
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-V 313
I+GY +HGL +++ F +M I+ DE Y +++SA ++G+ G +L + +L T
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 314 VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILS-----GYINA 366
++P EH+ ++ + G+L +A+ + D MP++ V W +LS G I
Sbjct: 446 IKPRVEHYA-----CVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
+ E K + R + +N + +M + ++G+ E
Sbjct: 501 GK-EVGKILLR-IDAKNPANYVMMSNLYGQAGYWNE 534
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
S++ GL + G Q+H Y+L++ L +N LI Y KC + + A +VFD
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKS----GSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
MP R++VSW+A++SG++ L+ + +F E+ + +
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 103
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 175/383 (45%), Gaps = 58/383 (15%)
Query: 3 SRTMANLFLAQLNHPS-ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
SRT+A L QL PS AT R + A I+ TGF N +++ + + A
Sbjct: 12 SRTLATL--RQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARK 69
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
++D+ P+ + S T++S + G+V A LF+A P R +++ ++ Y+ N
Sbjct: 70 VYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPD--RTVVTWTILMGWYARNSHFD 127
Query: 122 AAVKLFVRMKRDGFA--PDPFSFSTVL-GAMSLIAEEEWHCQQLHCDVVKWGVMCVP--S 176
A KLF +M R PD +F+T+L G + + Q+H VK G P +
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNA--VGQVHAFAVKLGFDTNPFLT 185
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
V N LL Y C L + VL F+E P +KD
Sbjct: 186 VSNVLLKSY--CEVRRLDLACVL-------FEEIP--EKD-------------------- 214
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
+V +N +I+GY + GLY E+ F KM G Q ++T++ ++ A
Sbjct: 215 -----------SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
F G+QLHA + T SV N ++ FY+K ++++ R +FD+MP D VS+
Sbjct: 264 HDFALGQQLHALSVTTGFSRDA----SVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 357 NAILSGYINARRLEEAKFIFREV 379
N ++S Y A + E + FRE+
Sbjct: 320 NVVISSYSQADQYEASLHFFREM 342
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 168/392 (42%), Gaps = 84/392 (21%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +HA +TTGF + N+++D Y K + LFD+ P D
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF----------- 316
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+SYN ++ +YS A++ F M+ GF F F
Sbjct: 317 ----------------------VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+T+L + ++ + +QLHC + + V N+L+ Y C
Sbjct: 355 ATMLSIAANLSSLQMG-RQLHCQALLATADSILHVGNSLVDMYAKC-------------- 399
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
++F+EA L K P TT V+W A+ISGYV+ G
Sbjct: 400 --EMFEEAELIFKSLPQRTT--------------------------VSWTALISGYVQKG 431
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
L+ F KM ++ D+ T+ +++ AS + G+QLHA+++R+ + +
Sbjct: 432 LHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS---GNLENVF 488
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
S + L+ Y KCG + A +VF++MP R+ VSWNA++S + + E A F ++ E
Sbjct: 489 S-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 383 NLLTWTVMISGL----AESGFGEESLKLFNQM 410
L +V I G+ + GF E+ + F M
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 138/344 (40%), Gaps = 80/344 (23%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
NP + LL +Y + LA LF P +D++++N ++ Y + ++ LF
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE--KDSVTFNTLITGYEKDGLYTESIHLF 238
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++M++ G P F+FS VL A+ + + QQLH V G SV N +L Y
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALG-QQLHALSVTTGFSRDASVGNQILDFY-- 295
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
++D + R L D M
Sbjct: 296 ----------------------------------------SKHDRVLETRMLFDEMPELD 315
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V++N +IS Y + YE + FR+M MG + + +++S + N GRQLH
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
L IL V N+L+ Y KC E+F
Sbjct: 376 QALLATADS----ILHVGNSLVDMYAKC-------EMF---------------------- 402
Query: 368 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
EEA+ IF+ +P+R ++WT +ISG + G LKLF +M+
Sbjct: 403 --EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 188 CASSTLVESPV---LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
C S+ +VE + +++ARK++DE P K+ S TMI+G+V+ D++SAR L D M
Sbjct: 49 CRSNFIVEDLLRRGQVSAARKVYDEMP--HKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSLISASFNTGLFNCG 302
V W ++ Y R+ ++EAF FR+M S D T+T+L+ + N
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
Q+HA F K G FD P L N +L
Sbjct: 167 GQVHA-----------------------FAVKLG--------FDTNPF--LTVSNVLLKS 193
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y RRL+ A +F E+PE++ +T+ +I+G + G ES+ LF +M+
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++FS + L+ Y+ G++K A ++F P R+ +S+NA++ A++ N DG AA+ F +
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPD--RNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV-----LNTLLSC 184
M G PD S VL A S HC V+ G ++ +
Sbjct: 544 MIESGLQPDSVSILGVLTACS------------HCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG--YVRNDDLA--SARKLL 240
Y C L+ A A KL DE P + DE W++++ +N LA +A KL
Sbjct: 592 YACMLD--LLGRNGRFAEAEKLMDEMPF-EPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
A A+ +M + Y G +E+ D + M GI+
Sbjct: 649 SMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 135/314 (42%), Gaps = 22/314 (7%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+L+ Y+ + AE +F + P R T+S+ A++ Y A +KLF +M+
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLP--QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
D +F+TVL A + A +QLH +++ G + + L+ Y C S
Sbjct: 449 RADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGS----- 502
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAW 251
+ A ++F+E P ++ SW +I+ + N D +A K+++ P +V+
Sbjct: 503 ----IKDAVQVFEEMP--DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+++ G E+ + F+ M + GI + Y ++ G F +L +
Sbjct: 557 LGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKL---MD 613
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+P E SV NA + A ++F +RD ++ ++ + Y A E
Sbjct: 614 EMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWE 673
Query: 371 EAKFIFREVPERNL 384
+ + + + + ER +
Sbjct: 674 KVRDVKKAMRERGI 687
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 52/351 (14%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LF D+ +L+ Y+ G V A KLF+ +T RDT+S+N+M+ YS
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFD--EITERDTVSWNSMISGYSEAGYAK 215
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+ LF +M+ +GF PD + ++LGA S + +
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD--------------------------- 248
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ L+E MA +K+ L K +I+ Y + DL SAR++ +
Sbjct: 249 ------LRTGRLLEE---MAITKKIGLSTFLGSK-------LISMYGKCGDLDSARRVFN 292
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M VAW AMI+ Y ++G EAF F +M G+ D T ++++SA + G
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+Q+ + +Q + + V L+ Y KCG++ +A VF+ MPV++ +WNA+++
Sbjct: 353 GKQIETHASELSLQHN----IYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 362 GYINARRLEEAKFIFRE--VPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
Y + +EA +F VP + +T+ ++S +G + + F++M
Sbjct: 409 AYAHQGHAKEALLLFDRMSVPPSD-ITFIGVLSACVHAGLVHQGCRYFHEM 458
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 48/277 (17%)
Query: 106 SYNAMVKAYSHNLDGH-AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC 164
S+N M++ ++ + H AA+ L+ RMK G PD F+++ V A + + EE + +H
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKL-EEIGVGRSVHS 156
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
+ K G+ + ++L+ Y C + ARKLFDE ++++D SW +MI
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQ---------VGYARKLFDE--ITERDTVSWNSMI 205
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
+GY +GY + +A D FRKM G + DE
Sbjct: 206 SGYSE--------------------------AGYAK-----DAMDLFRKMEEEGFEPDER 234
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T S++ A + G GR L + + S + + LI+ Y KCG L AR V
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF----LGSKLISMYGKCGDLDSARRV 290
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
F++M +D V+W A+++ Y + EA +F E+ +
Sbjct: 291 FNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 245 HPIAVAWNAMISGYVRH-GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
P ++N MI G +E A +R+M G++ D++TY + A GR
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+H+ + + ++ H +N++LI Y KCG++ AR++FD++ RD VSWN+++SGY
Sbjct: 153 SVHSSLFKVGLERDVH----INHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGY 208
Query: 364 INARRLEEAKFIFREVPERNL 384
A ++A +FR++ E
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGF 229
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 32/327 (9%)
Query: 89 LAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA 148
LAE + RD +S+NA++ A+ N G+ + LFV M R PD F+F ++L A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 149 MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFD 208
+ + ++H +VK G+ SV +L+ Y C ++E + S + F
Sbjct: 493 CT--GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG---MIEEAEKIHS--RFFQ 545
Query: 209 EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAF 268
A +S E K+ + + V+WN++ISGYV E+A
Sbjct: 546 RANVSGTMEE-----------------LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 269 DTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNAL 328
F +M MGI D++TY +++ N G+Q+HA V++ +Q S+ +I S L
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQ-SDVYICST---L 644
Query: 329 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL---- 384
+ Y+KCG L +R +F+K RD V+WNA++ GY + + EEA +F + N+
Sbjct: 645 VDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Query: 385 LTWTVMISGLAESGFGEESLKLFNQMK 411
+T+ ++ A G ++ L+ F MK
Sbjct: 705 VTFISILRACAHMGLIDKGLEYFYMMK 731
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 173/412 (41%), Gaps = 73/412 (17%)
Query: 10 FLAQLNHPSATQ--------------TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSN 55
FL Q+N S T L + HAH++ +GFR T + N L+ +Y S +
Sbjct: 39 FLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRD 98
Query: 56 IPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
A +FDK P D+ S +++ YS + ++ A FN PV RD +S+N+M+ Y
Sbjct: 99 FVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV--RDVVSWNSMLSGYL 156
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
N + ++++FV M R+G D +F+ +L S + E+ Q+H VV+ G
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL-EDTSLGMQIHGIVVRVGCDTDV 215
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
+ LL Y VES ++F P +K+ SW+ +IAG V+N+ L+
Sbjct: 216 VAASALLDMY--AKGKRFVESL-------RVFQGIP--EKNSVSWSAIIAGCVQNNLLSL 264
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A K F++M + + + Y S++ +
Sbjct: 265 ALKF-------------------------------FKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G QLHA+ L++ V A + Y KC + A+ +FD + S
Sbjct: 294 LSELRLGGQLHAHALKSDFAADG----IVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 356 WNAILSGYINAR----------RLEEAKFIFREVPERNLLTWTVMISGLAES 397
+NA+++GY RL + F E+ + ++ GL+E
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 154/361 (42%), Gaps = 77/361 (21%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
D RT L Y+ N++ A+ LF+ + R SYNAM+ YS G A+ LF
Sbjct: 314 ADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ--SYNAMITGYSQEEHGFKALLLFH 371
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
R+ G D S S V A +L+ + G+ + + LS +C
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKG------------LSEGLQIYGLAIKSSLSLDVCV 419
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
A++ I Y + LA A ++ D M A
Sbjct: 420 ANAA-------------------------------IDMYGKCQALAEAFRVFDEMRRRDA 448
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V+WNA+I+ + ++G E F M I+ DE+T+ S++ A G G ++H+
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSS 507
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV----------------FDKMPVRD 352
++++ + + SV +LI Y+KCG + +A ++ +KM +
Sbjct: 508 IVKSGMASNS----SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Query: 353 L----VSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMI---SGLAESGFGE 401
L VSWN+I+SGY+ + E+A+ +F + E + T+ ++ + LA +G G+
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 402 E 402
+
Sbjct: 624 Q 624
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
G G+Q HA+++ + +P+ F+L N L+ YT V A VFDKMP+RD+VSW
Sbjct: 62 GALELGKQAHAHMIISGFRPTT-FVL---NCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 357 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
N +++GY + + +A F +P R++++W M+SG ++G +S+++F M
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 156/391 (39%), Gaps = 66/391 (16%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH+ I+ +G + LID+Y K I A + + F R + +G
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR-----FFQRANV------SGT 552
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
++ EK+ N + +S+N+++ Y A LF RM G PD F+++TVL
Sbjct: 553 MEELEKMHNKRLQEM--CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ +A +Q+H V+K + + +TL+ Y C + +R +
Sbjct: 611 DTCANLASAGLG-KQIHAQVIKKELQSDVYICSTLVDMYSKCGD---------LHDSRLM 660
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
F+++ ++D +W MI GY HG EE
Sbjct: 661 FEKSL--RRDFVTWNAMIC-------------------------------GYAHHGKGEE 687
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPSEHFILSVN 325
A F +M I+ + T+ S++ A + GL + G + + R + P L
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQ----LPHY 743
Query: 326 NALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYI----NARRLEEAKFIFREVP 380
+ ++ K GK+ +A E+ +MP D V W +L N EEA +
Sbjct: 744 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 803
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ +T++ + A++G E+ L M+
Sbjct: 804 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMR 834
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 188/414 (45%), Gaps = 60/414 (14%)
Query: 7 ANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKS-SNIPYAHHLFDK 65
N +L ++ +T + IHA ++ TG + +R++ C S S++ YA+ +F +
Sbjct: 24 GNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTR 83
Query: 66 TPNPDIFSRTTLLSAYSAAGNVKLAEKLF----NATPVTLRDTISYNAMVKAYSHNLDGH 121
+ + F T++ +S + ++A +F ++P ++Y ++ KAY
Sbjct: 84 INHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGR----- 138
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
+ RDG +QLH V+K G+ + NT+
Sbjct: 139 ------LGQARDG-------------------------RQLHGMVIKEGLEDDSFIRNTM 167
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
L Y+ C L+E A ++F + D +W +MI G+ + + A+ L D
Sbjct: 168 LHMYVTCG--CLIE-------AWRIF--LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
M V+WN+MISG+VR+G +++A D FR+M ++ D +T SL++A G
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
GR +H Y++R + + + ALI Y KCG + + VF+ P + L WN+++
Sbjct: 277 GRWIHEYIVRNRFELNSIVV----TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 362 GYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
G N E A +F E+ L +++ +++ A SG + + F MK
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 182/374 (48%), Gaps = 26/374 (6%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNV 87
H + +G LT + N+L+++Y KS + A ++FD+ +++S +++AY NV
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 88 KLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG--HAAVKLFVRMKR---DGFAPDPFSF 142
K A +LF + RD I+YN ++ ++ DG A+++F M R D D F+
Sbjct: 71 KEARELFESDNCE-RDLITYNTLLSGFAKT-DGCESEAIEMFGEMHRKEKDDIWIDDFTV 128
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+T++ +S ++ +QLH +VK G +++L+ Y C
Sbjct: 129 TTMV-KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGK---------FKE 178
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP---IAVAWNAMISGYV 259
+F+ + + D + MIA Y R D+ A + +P ++WN +I+GY
Sbjct: 179 VCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF--WRNPELNDTISWNTLIAGYA 236
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++G EEA M G++ DE+++ ++++ + G+++HA VL+ ++
Sbjct: 237 QNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKF 296
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
V++ ++ Y KCG + A +L S ++++ GY + ++ EAK +F +
Sbjct: 297 ----VSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Query: 380 PERNLLTWTVMISG 393
E+NL+ WT M G
Sbjct: 353 SEKNLVVWTAMFLG 366
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 121/221 (54%), Gaps = 14/221 (6%)
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISG 257
L+ AR +FDE + +++ SW +IA YV+ +++ AR+L + + +N ++SG
Sbjct: 38 LLREARNVFDE--MLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSG 95
Query: 258 YVR-HGLYEEAFDTFRKMHSM---GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+ + G EA + F +MH I +D++T T+++ S G QLH +++T
Sbjct: 96 FAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTG 155
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILSGYINARRLEE 371
++ F +S +LI Y+KCGK + +F+ V D V+ NA+++ Y +++
Sbjct: 156 NDGTK-FAVS---SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDK 211
Query: 372 AKFIFREVPERN-LLTWTVMISGLAESGFGEESLKLFNQMK 411
A +F PE N ++W +I+G A++G+ EE+LK+ M+
Sbjct: 212 ALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 185/418 (44%), Gaps = 72/418 (17%)
Query: 10 FLAQLNHPSATQTL--ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH--HLFDK 65
F A LN S+ ++L + +HA +L G + + ++D+YCK N+ YA HL
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 66 TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVK 125
N ++S ++++ YS+ G + A++LF++ ++ ++ + + AM Y NL +V
Sbjct: 323 FGN--LYSASSMIVGYSSQGKMVEAKRLFDS--LSEKNLVVWTAMFLGYL-NLRQPDSVL 377
Query: 126 LFVR--MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
R + + PD +VLGA SL A E +++H ++ G++ ++ +
Sbjct: 378 ELARAFIANETNTPDSLVMVSVLGACSLQAYME-PGKEIHGHSLRTGILMDKKLVTAFVD 436
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y C + + A ++FD + + R+
Sbjct: 437 MYSKCGN---------VEYAERIFD----------------SSFERD------------- 458
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
V +NAMI+G HG ++F F M G + DE T+ +L+SA + GL G
Sbjct: 459 ----TVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGE 514
Query: 304 QLHAYVLR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA-IL 360
+ ++ + + H+ +I Y K +L +A E+ + + D V +A IL
Sbjct: 515 KYFKSMIEAYNISPETGHY-----TCMIDLYGKAYRLDKAIELMEGI---DQVEKDAVIL 566
Query: 361 SGYINARRLEEAKFIFREVPERNLLT-------WTVMISGLAESGFGEESLKLFNQMK 411
++NA + + +EV E+ L+ + + + A SG +E ++ +QM+
Sbjct: 567 GAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMR 624
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR-EVPERN 383
+N L+ Y+K G L +AR VFD+M R++ SWNA+++ Y+ ++EA+ +F + ER+
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERD 85
Query: 384 LLTWTVMISGLAES-GFGEESLKLFNQM 410
L+T+ ++SG A++ G E++++F +M
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEM 113
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 155/318 (48%), Gaps = 19/318 (5%)
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
PV R+ + A+++ Y+ A+ ++ M+++ P F+FS +L A + +
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+Q H + C V NT++ Y+ C S + ARK+FDE P ++D
Sbjct: 168 G-RQFHAQTFRLRGFCFVYVGNTMIDMYVKCES---------IDCARKVFDEMP--ERDV 215
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SWT +IA Y R ++ A +L + + VAW AM++G+ ++ +EA + F +M
Sbjct: 216 ISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKS 275
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
GI+ DE T ISA G + ++ PS+H + + +ALI Y+KCG
Sbjct: 276 GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVV--IGSALIDMYSKCGN 333
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMIS 392
+ +A VF M +++ ++++++ G R +EA +F + + N +T+ +
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 393 GLAESGFGEESLKLFNQM 410
+ SG ++ ++F+ M
Sbjct: 394 ACSHSGLVDQGRQVFDSM 411
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
AR++++ + W A+I GY G ++EA + M I +T+++L+ A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
N GRQ HA R + V N +I Y KC + AR+VFD+MP RD++S
Sbjct: 162 MKDLNLGRQFHAQTFRL----RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS 217
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
W +++ Y +E A +F +P ++++ WT M++G A++ +E+L+ F++M+
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 62/348 (17%)
Query: 23 LARAIHAHILTTGFRLTPL----IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
L R HA FRL + N +ID+Y K +I A +FD+ P D+ S T L+
Sbjct: 167 LGRQFHAQT----FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELI 222
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
+AY+ GN++ A +LF + P +D +++ AMV ++ N A++ F RM++ G D
Sbjct: 223 AAYARVGNMECAAELFESLPT--KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
+ + + A C QL +S + V
Sbjct: 281 EVTVAGYISA----------CAQL--------------------------GASKYADRAV 304
Query: 199 LMASARKLFDEAPLSQKDEPS-WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
+A ++ S D + +I Y + ++ A + M + +++MI G
Sbjct: 305 QIAQ------KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 258 YVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQ 315
HG +EA F M + I+ + T+ + A ++GL + GRQ+ + +T VQ
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILS 361
P+ +H+ ++ + G+L +A E+ M V W A+L
Sbjct: 419 PTRDHY-----TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 156/355 (43%), Gaps = 90/355 (25%)
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+G + A +F + R+T+++N M+ Y + + A KLF M +
Sbjct: 53 SGYIAEARDIFE--KLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR---------- 100
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
DVV W NT++S Y+ C +E A
Sbjct: 101 ---------------------DVVTW---------NTMISGYVSCGGIRFLEE------A 124
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
RKLFDE P +D SW TMI+GY +N + A L + M AV+W+AMI+G+ ++G
Sbjct: 125 RKLFDEMP--SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGE 182
Query: 264 YEEAFDTFRKMHS----------MGIQMDEY---------TYTSLISA------SFNTGL 298
+ A FRKM G+ +E Y SL+S ++NT +
Sbjct: 183 VDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLI 242
Query: 299 FNCGRQLHAYVLRTVVQP-------------SEHFILSVN--NALITFYTKCGKLVQARE 343
G++ R + E F +V N++I Y K G +V AR
Sbjct: 243 VGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARL 302
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
+FD+M RD +SWN ++ GY++ R+E+A +F E+P R+ +W +M+SG A G
Sbjct: 303 LFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVG 357
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 167/360 (46%), Gaps = 78/360 (21%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD-------------TISYNAMVKAYSHN 117
+++ TL+ Y G V+ A LF+ P D +S+N+M+KAY
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
D +A LF +MK D + W
Sbjct: 295 GDVVSARLLFDQMKDR-------------------------------DTISW-------- 315
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
NT++ Y+ + M A LF E P +D SW M++GY ++ AR
Sbjct: 316 -NTMIDGYVHVSR---------MEDAFALFSEMP--NRDAHSWNMMVSGYASVGNVELAR 363
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
+ V+WN++I+ Y ++ Y+EA D F +M+ G + D +T TSL+SAS TG
Sbjct: 364 HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TG 421
Query: 298 LFN--CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLV 354
L N G Q+H V++TV+ + V+NALIT Y++CG+++++R +FD+M + R+++
Sbjct: 422 LVNLRLGMQMHQIVVKTVIPD-----VPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+WNA++ GY EA +F + + +T+ +++ A +G +E+ F M
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM 536
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 131/261 (50%), Gaps = 19/261 (7%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +ID Y S + A LF + PN D S ++S Y++ GNV+LA F TP +
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPE--KH 373
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
T+S+N+++ AY N D AV LF+RM +G PDP + +++L A + + Q+H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG-MQMH 432
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
VVK + VP V N L++ Y C + +R++FDE L +++ +W M
Sbjct: 433 QIVVKTVIPDVP-VHNALITMYSRCGE---------IMESRRIFDEMKL-KREVITWNAM 481
Query: 224 IAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-G 278
I GY + + + A L M +P + + ++++ GL +EA F M S+
Sbjct: 482 IGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYK 541
Query: 279 IQMDEYTYTSLISASFNTGLF 299
I+ Y+SL++ + G F
Sbjct: 542 IEPQMEHYSSLVNVTSGQGQF 562
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 15/164 (9%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
A N ++ +R G EA D F K+ + + T+ ++IS N R+L
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFD-- 95
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGK---LVQAREVFDKMPVRDLVSWNAILSGYINA 366
V P + N +I+ Y CG L +AR++FD+MP RD SWN ++SGY
Sbjct: 96 ----VMPKRDVV--TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKN 149
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
RR+ EA +F ++PERN ++W+ MI+G ++G + ++ LF +M
Sbjct: 150 RRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+A AR +F++ L ++ +W TMI+GYV+ ++ ARKL D M V WN MISGYV
Sbjct: 56 IAEARDIFEK--LEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 260 RHG---LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
G EEA F +M S D +++ ++IS + R++ +L P
Sbjct: 114 SCGGIRFLEEARKLFDEMPS----RDSFSWNTMISG------YAKNRRIGEALLLFEKMP 163
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ + +A+IT + + G++ A +F KMPV+D A+++G I RL EA ++
Sbjct: 164 ERNAVSW--SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL 221
Query: 377 RE----VPERNLLT--WTVMISGLAESGFGEESLKLFNQM 410
+ V R L + +I G + G E + LF+Q+
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI 261
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 57/390 (14%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
+IHA I+ T + LI + ++ YA+ +F NP+++ T ++ + ++G
Sbjct: 47 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 106
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
+ DG V L+ RM + PD + ++V
Sbjct: 107 ------------------------------RSADG---VSLYHRMIHNSVLPDNYVITSV 133
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
L A L C+++H V+K G SV ++ Y S LV +A+K
Sbjct: 134 LKACDLKV-----CREIHAQVLKLGFGSSRSVGLKMMEIY--GKSGELV-------NAKK 179
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE 265
+FDE P +D + T MI Y + A +L + V W AMI G VR+
Sbjct: 180 MFDEMP--DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMN 237
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
+A + FR+M + +E+T ++SA + G GR +H++V ++ S V
Sbjct: 238 KALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF----VG 293
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER--- 382
NALI Y++CG + +AR VF M +D++S+N ++SG EA FR++ R
Sbjct: 294 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 383 -NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N +T +++ + G + L++FN MK
Sbjct: 354 PNQVTLVALLNACSHGGLLDIGLEVFNSMK 383
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 179/402 (44%), Gaps = 70/402 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ R IHA +L GF + + ++++IY KS + A +FD+ P+ D + T +++ YS
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G +K A +LF V ++DT+ + AM+ N + + A++LF M+ + + + F+
Sbjct: 201 ECGFIKEALELFQ--DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
VL A S + E + +H V + V N L++ Y C +
Sbjct: 259 VCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGD---------INE 308
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR++F +R+ D+ S +N MISG HG
Sbjct: 309 ARRVFR------------------VMRDKDVIS---------------YNTMISGLAMHG 335
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHF 320
EA + FR M + G + ++ T +L++A + GL + G ++ + R V+P EH+
Sbjct: 336 ASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY 395
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS----------GYINARRL 369
++ + G+L +A + +P+ D + +LS G A+RL
Sbjct: 396 -----GCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRL 450
Query: 370 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E+ E P+ T+ ++ + A SG +ES ++ M+
Sbjct: 451 FES-----ENPDSG--TYVLLSNLYASSGKWKESTEIRESMR 485
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 32/344 (9%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM---KRD 133
L+S S+ G + A +FN + T ++N M+++ S N A+ LF+ M +
Sbjct: 58 LISVSSSFGETQYASLVFNQ--LQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQS 115
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
F D F+F V+ A L + Q+H +K G NTL+ Y C
Sbjct: 116 QF--DKFTFPFVIKA-CLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPD- 171
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
S RK+FD+ P + SWTTM+ G V N L SA + + M V+W A
Sbjct: 172 --------SGRKVFDKMP--GRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTA 221
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
MI+ YV++ +EAF FR+M ++ +E+T +L+ AS G + GR +H Y +
Sbjct: 222 MITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK-- 279
Query: 314 VQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
F+L + ALI Y+KCG L AR+VFD M + L +WN++++ EE
Sbjct: 280 ----NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 372 AKFIFREVP-----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
A +F E+ E + +T+ ++S A +G ++ L+ F +M
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 236 ARKLLDGMTHPIAVAWNAMI-SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
A + + + P WN MI S V H E M S Q D++T+ +I A
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
+ G Q+H ++ F N L+ Y KCGK R+VFDKMP R +V
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFF----QNTLMDLYFKCGKPDSGRKVFDKMPGRSIV 186
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
SW +L G ++ +L+ A+ +F ++P RN+++WT MI+ ++ +E+ +LF +M+
Sbjct: 187 SWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 58/287 (20%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S++ L +H + GF +N L+D+Y K +FDK P I S TT+
Sbjct: 132 SSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTM 191
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
L + + AE +FN P +R+ +S+ AM+ AY N A +LF RM+ D P
Sbjct: 192 LYGLVSNSQLDSAEIVFNQMP--MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKP 249
Query: 138 DPFSF------STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
+ F+ ST LG++S+ W +H K G + + L+ Y C S
Sbjct: 250 NEFTIVNLLQASTQLGSLSM---GRW----VHDYAHKNGFVLDCFLGTALIDMYSKCGS- 301
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ ARK+FD ++ LA+ W
Sbjct: 302 --------LQDARKVFD------------------VMQGKSLAT---------------W 320
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTG 297
N+MI+ HG EEA F +M ++ D T+ ++SA NTG
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 29/354 (8%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N D + + A S AG+++ A +F P +T +N M++A S LD A +
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCP--NTYLHNTMIRALSL-LDEPNAHSIA 100
Query: 128 VRMKRDGFA----PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
+ + R +A PD F+F VL +++ + W +Q+H VV +G V+ L+
Sbjct: 101 ITVYRKLWALCAKPDTFTFPFVL-KIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y C + ARK+FDE + KD W ++AGY + ++ AR LL+ M
Sbjct: 160 MYFSCGG---------LGDARKMFDEMLV--KDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 244 THPI--AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+ V+W +ISGY + G EA + F++M ++ DE T +++SA + G
Sbjct: 209 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 268
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G ++ +YV + + +S+NNA+I Y K G + +A +VF+ + R++V+W I++
Sbjct: 269 GERICSYVDHRGMNRA----VSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 362 GYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
G EA +F + + N +T+ ++S + G+ + +LFN M+
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 135/342 (39%), Gaps = 51/342 (14%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
R IH ++ GF + + LI +Y + A +FD+ D+ LL+ Y
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G + A L P +R+ +S+ ++ Y+ + A+++F RM + PD +
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
VL A C L S L E
Sbjct: 254 LAVLSA----------CADL--------------------------GSLELGERICSYVD 277
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
R + L+ +I Y ++ ++ A + + + V W +I+G HG
Sbjct: 278 HRGMNRAVSLNN-------AVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPS-EHF 320
EA F +M G++ ++ T+ +++SA + G + G++L ++ + + P+ EH+
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+I + GKL +A EV MP + + W ++L+
Sbjct: 391 -----GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 173/375 (46%), Gaps = 59/375 (15%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ AY++ +V A K+F+ P R+ I N M+++Y +N VK+F M
Sbjct: 80 LMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD ++F VL A S +++H K G+ V N L+S Y C
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIG-RKIHGSATKVGLSSTLFVGNGLVSMYGKCG------- 189
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND-------------------DLASAR 237
++ AR + DE +S++D SW +++ GY +N D +
Sbjct: 190 --FLSEARLVLDE--MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMA 245
Query: 238 KLLDGMTHPIA------------------VAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
LL +++ V+WN MI Y+++ + EA + + +M + G
Sbjct: 246 SLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ D + TS++ A +T + G+++H Y+ R + P+ L + NALI Y KCG L
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN----LLLENALIDMYAKCGCLE 361
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLA 395
+AR+VF+ M RD+VSW A++S Y + R +A +F ++ + L + + ++ +
Sbjct: 362 KARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACS 421
Query: 396 ESGFGEESLKLFNQM 410
+G EE F M
Sbjct: 422 HAGLLEEGRSCFKLM 436
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 41/226 (18%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
++ Y D+ASARK+ D + + N MI YV +G Y E F M ++ D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
YT+ ++ A +G GR++H + + + L V N L++ Y KCG L +AR
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST----LFVGNGLVSMYGKCGFLSEAR 195
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP---------------------- 380
V D+M RD+VSWN+++ GY +R ++A + RE+
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 381 ---------------ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+++L++W VMI ++ E+++L+++M+
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P++ L+ Y+ G ++ A +F + RD +S+ AM+ AY + G AV LF
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFEN--MKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 129 RMKRDGFAPDPFSFSTVLGAMS--LIAEEEWHCQQLHCD 165
+++ G PD +F T L A S + EE C +L D
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 179/403 (44%), Gaps = 53/403 (13%)
Query: 13 QLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIF 72
QL + T T A+A+HAHI+ G + N L+++Y K +A +FD+ P+ D
Sbjct: 11 QLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHI 70
Query: 73 SRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR 132
+ ++L+A + A NL G
Sbjct: 71 AWASVLTALNQA--------------------------------NLSGKTLSVFSSVGSS 98
Query: 133 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
G PD F FS ++ A + + + H +Q+HC + V ++L+ Y C
Sbjct: 99 SGLRPDDFVFSALVKACANLGSID-HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCG--- 154
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
L+ SA+ +FD + K+ SWT M++GY ++ A +L + +W
Sbjct: 155 ------LLNSAKAVFDS--IRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWT 206
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQ-MDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
A+ISG+V+ G EAF F +M + +D +S++ A N GRQ+H V+
Sbjct: 207 ALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIA 266
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ ++NALI Y KC ++ A+++F +M RD+VSW +++ G + E+
Sbjct: 267 LGFDSC----VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEK 322
Query: 372 AKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
A ++ ++ N +T+ +I + GF E+ +LF M
Sbjct: 323 ALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 31/250 (12%)
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKL--FDEAPLSQKDEPSWTTMIAGYVR 229
M +P L+ L +C + TL + L A KL PL+ T++ Y +
Sbjct: 1 MLIPHYLHQL---QLCARNRTLTTAKALHAHIVKLGIVQCCPLA-------NTLVNVYGK 50
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTS 288
+ A ++ D M H +AW ++++ + L + F + S ++ D++ +++
Sbjct: 51 CGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSA 110
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS-------VNNALITFYTKCGKLVQA 341
L+ A N G + GRQ+H HFI+S V ++L+ Y KCG L A
Sbjct: 111 LVKACANLGSIDHGRQVHC-----------HFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 401
+ VFD + V++ +SW A++SGY + R EEA +FR +P +NL +WT +ISG +SG G
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 402 ESLKLFNQMK 411
E+ +F +M+
Sbjct: 220 EAFSVFTEMR 229
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 54/342 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R +H H + + + ++++ L+D+Y K + A +FD + S T ++S Y+
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP-DPFSF 142
+G + A +LF PV ++ S+ A++ + + G A +F M+R+ DP
Sbjct: 184 SGRKEEALELFRILPV--KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVL 241
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S+++GA + +A +Q+H V+ G + N L+ Y C+ + +
Sbjct: 242 SSIVGACANLA-ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD---------VIA 291
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A+ +F + +D SWT++I G +HG
Sbjct: 292 AKDIFSR--MRHRDVVSWTSLIV-------------------------------GMAQHG 318
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHF 320
E+A + M S G++ +E T+ LI A + G GR+L + + ++PS +H+
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILS 361
L+ + G L +A + MP D +W A+LS
Sbjct: 379 -----TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 39/293 (13%)
Query: 108 NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC-----QQL 162
N + KAY + A+ + + R GF PD ++F +SLI+ E C +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTF------VSLISCIEKTCCVDSGKMC 140
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H +K G V V N+L+ Y CC + L A+KLF E P ++D SW +
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDL---------AKKLFVEIP--KRDIVSWNS 189
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+IAG VRN D+ +A KL D M ++WN MIS Y+ + FR+M G Q +
Sbjct: 190 IIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGN 249
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E T L++A + GR +HA ++RT + S + ++ ALI Y KC ++ AR
Sbjct: 250 ESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSS----VVIDTALIDMYGKCKEVGLAR 305
Query: 343 EVFDKMPVRDLVSWNA-ILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
+FD + +R+ V+WN IL+ ++ R PE L + MI+G+
Sbjct: 306 RIFDSLSIRNKVTWNVMILAHCLHGR------------PEGGLELFEAMINGM 346
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 4/159 (2%)
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N + Y+ ++A + + G D YT+ SLIS T + G+ H ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+L V N+L+ YT CG L A+++F ++P RD+VSWN+I++G + +
Sbjct: 147 HGCDQ----VLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
A +F E+P++N+++W +MIS + S+ LF +M
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM 241
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 135/343 (39%), Gaps = 54/343 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ H + G ++N L+ +Y + A LF + P DI S ++++
Sbjct: 137 GKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR 196
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G+V A KLF+ P ++ IS+N M+ AY + ++ LF M R GF + +
Sbjct: 197 NGDVLAAHKLFDEMPD--KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLV 254
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+L A A +K G S++ T L+ SS +++
Sbjct: 255 LLLNACGRSAR------------LKEGRSVHASLIRTFLN------SSVVID-------- 288
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
T +I Y + ++ AR++ D ++ V WN MI + HG
Sbjct: 289 -----------------TALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGR 331
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPSEHFIL 322
E + F M + ++ DE T+ ++ GL + G+ ++ ++ ++P+
Sbjct: 332 PEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN----F 387
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDL----VSWNAILS 361
+ Y+ G +A E +P D+ W +LS
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 163/343 (47%), Gaps = 59/343 (17%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
RT L+ AYS + A +LF + + +S+ AM+ + N AV LF MKR
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGC-VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G P+ F++S +L A+ +I+ E H Q + + + SST+
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER---------------------SSTV 430
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
T ++ YV+ + A K+ G+ VAW+A
Sbjct: 431 --------------------------GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS--ASFNTGLFNCGRQLHAYVLR 311
M++GY + G E A F ++ GI+ +E+T++S+++ A+ N + G+Q H + ++
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ-GKQFHGFAIK 523
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ + S L V++AL+T Y K G + A EVF + +DLVSWN+++SGY + +
Sbjct: 524 SRLDSS----LCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 372 AKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
A +F+E+ +R + +T+ + + +G EE K F+ M
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 84/321 (26%)
Query: 47 IDIYC----KSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR 102
+ IYC SS + AH+LFDK+P R
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPG---------------------------------R 56
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D SY +++ +S + A +LF+ + R G D FS+VL + + +E + +QL
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFG-RQL 115
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
HC +K+G + D T+
Sbjct: 116 HCQCIKFGFL------------------------------------------DDVSVGTS 133
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
++ Y++ + RK+ D M V W +ISGY R+ + +E F +M + G Q +
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+T+ + + G+ G Q+H V++ + + + V+N+LI Y KCG + +AR
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT----IPVSNSLINLYLKCGNVRKAR 249
Query: 343 EVFDKMPVRDLVSWNAILSGY 363
+FDK V+ +V+WN+++SGY
Sbjct: 250 ILFDKTEVKSVVTWNSMISGY 270
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 153/332 (46%), Gaps = 58/332 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ T+L+ Y N K K+F+ + R+ +++ ++ Y+ N + LF+R
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFD--EMKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ--QLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M+ +G P+ F+F+ LG ++AEE + Q+H VVK G+ V N+L++ Y+
Sbjct: 185 MQNEGTQPNSFTFAAALG---VLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + + AR LFD+ + K +W +MI+GY N
Sbjct: 242 CGN---------VRKARILFDKTEV--KSVVTWNSMISGYAAN----------------- 273
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
GL EA F M +++ E ++ S+I N QLH
Sbjct: 274 --------------GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINA 366
+VV+ F ++ AL+ Y+KC ++ A +F ++ V ++VSW A++SG++
Sbjct: 320 ----SVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 367 RRLEEAKFIFREVPER----NLLTWTVMISGL 394
EEA +F E+ + N T++V+++ L
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 51/277 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T LL AY G V+ A K+F+ + +D ++++AM+ Y+ + AA+K+F + + G
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSG--IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ F+FS++L + +Q H +K S L++ L C SS L+
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK-------SRLDSSL-----CVSSALL 537
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
TM Y + ++ SA ++ V+WN+M
Sbjct: 538 ---------------------------TM---YAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--T 312
ISGY +HG +A D F++M ++MD T+ + +A + GL G + ++R
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ EH N+ ++ Y++ G+L +A +V + MP
Sbjct: 628 IAPTKEH-----NSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 285
G V + L +A L D ++ +++ G+ R G +EA F +H +G++MD
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 286 YTSL--ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
++S+ +SA+ LF GRQLH ++ +SV +L+ Y K R+
Sbjct: 96 FSSVLKVSATLCDELF--GRQLHCQCIKFGFLDD----VSVGTSLVDTYMKGSNFKDGRK 149
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESGF 399
VFD+M R++V+W ++SGY +E +F E + N T+ + LAE G
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 400 GEESLKL 406
G L++
Sbjct: 210 GGRGLQV 216
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 28/337 (8%)
Query: 80 AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
AY++ G ++ + LF+ T D + A + S N A L+V++ P+
Sbjct: 73 AYASHGKIRHSLALFHQT--IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNE 130
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
F+FS++L + S + + +H V+K+G+ P V L+ Y
Sbjct: 131 FTFSSLLKSCSTKSG-----KLIHTHVLKFGLGIDPYVATGLVDVYAKGGD--------- 176
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ SA+K+FD P ++ S T MI Y + ++ +AR L D M V+WN MI GY
Sbjct: 177 VVSAQKVFDRMP--ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 260 RHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
+HG +A F+K+ + G + DE T + +SA G GR +H +V + ++ +
Sbjct: 235 QHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLN- 293
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
+ V LI Y+KCG L +A VF+ P +D+V+WNA+++GY ++A +F E
Sbjct: 294 ---VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 379 VP-----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + +T+ + A +G E +++F M
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 61/352 (17%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S + + IH H+L G + P + L+D+Y K ++ A +FD+ P + S T +
Sbjct: 139 SCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAM 198
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF-A 136
++ Y+ GNV+ A LF++ + RD +S+N M+ Y+ + + A+ LF ++ +G
Sbjct: 199 ITCYAKQGNVEAARALFDS--MCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256
Query: 137 PDPFSFSTVLGAMSLIAEEE---WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
PD + L A S I E W +H V + V L+ Y C S
Sbjct: 257 PDEITVVAALSACSQIGALETGRW----IHVFVKSSRIRLNVKVCTGLIDMYSKCGS--- 309
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+E VL +F++ P +KD +W MIAGY A
Sbjct: 310 LEEAVL------VFNDTP--RKDIVAWNAMIAGY-------------------------A 336
Query: 254 MISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLR 311
M HG ++A F +M + G+Q + T+ + A + GL N G R +
Sbjct: 337 M------HGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 312 TVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++P EH+ L++ + G+L +A E M + D V W+++L
Sbjct: 391 YGIKPKIEHY-----GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 172/384 (44%), Gaps = 51/384 (13%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS--RTTLLSAYSAAGNVKLAEK 92
GF + + LI C ++ H F + D +S ++ YS G ++ A
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 93 LFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLI 152
+F LRD +S+N+M+ AY + +G A+ L+ M GF D F+ ++VL A++ +
Sbjct: 195 VFYGMD-ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 153 AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPL 212
+ +Q H ++K G V + L+ Y C
Sbjct: 254 -DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC--------------------- 291
Query: 213 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY-VRHGLYEEAFDTF 271
D + + K+ + P V WN MISGY + L EEA +F
Sbjct: 292 ------------------DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
R+M +G + D+ ++ + SA N + +Q+H +++ + PS +SVNNALI+
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI-PSNR--ISVNNALISL 390
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTW 387
Y K G L AR VFD+MP + VS+N ++ GY EA +++ + + N +T+
Sbjct: 391 YYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
Query: 388 TVMISGLAESGFGEESLKLFNQMK 411
++S A G +E + FN MK
Sbjct: 451 VAVLSACAHCGKVDEGQEYFNTMK 474
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 62/364 (17%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+++HA + + + + N +++Y K + YA F T P++FS ++ AY+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+ +A +LF+ P DT+SYN ++ Y+ + AA+ LF RM++ GF D F+ S
Sbjct: 87 DSKIHIARQLFDEIPQP--DTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 144 TVLGA----MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
++ A + LI +QLHC V G SV N ++ Y + L+ V
Sbjct: 145 GLIAACCDRVDLI-------KQLHCFSVSGGFDSYSSVNNAFVTYY---SKGGLLREAV- 193
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
S DE +DE SW +MI Y ++ + A A L
Sbjct: 194 --SVFYGMDEL----RDEVSWNSMIVAYGQHKEGAKALAL-------------------- 227
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
+++M G ++D +T S+++A + GRQ H +++ + H
Sbjct: 228 -----------YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH 276
Query: 320 FILSVNNALITFYTKCG---KLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFI 375
V + LI FY+KCG + + +VF ++ DLV WN ++SGY +N EEA
Sbjct: 277 ----VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKS 332
Query: 376 FREV 379
FR++
Sbjct: 333 FRQM 336
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 140/348 (40%), Gaps = 93/348 (26%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIY--CKSSNIPY-AHHLFDKTPNPDIFSRTTLLSA 80
R H ++ GF + + LID Y C + Y + +F + +PD+ T++S
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
YS N +L+E+ AVK F +M+R G PD
Sbjct: 319 YSM--NEELSEE------------------------------AVKSFRQMQRIGHRPDDC 346
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP----SVLNTLLSCYICCASSTLVES 196
SF V A S ++ C+Q+H +K +P SV N L+S Y +
Sbjct: 347 SFVCVTSACSNLSSPS-QCKQIHGLAIK---SHIPSNRISVNNALISLYYKSGN------ 396
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+ AR +FD P AV++N MI
Sbjct: 397 ---LQDARWVFDRMPELN---------------------------------AVSFNCMIK 420
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQ 315
GY +HG EA +++M GI ++ T+ +++SA + G + G++ + T ++
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 316 P-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
P +EH+ + +I + GKL +A D MP + V+W A+L
Sbjct: 481 PEAEHY-----SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG 523
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ LHA ++++V S + ++N + Y+KCG+L AR F ++ S+N I+
Sbjct: 27 GKSLHALYVKSIVASSTY----LSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 362 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y ++ A+ +F E+P+ + +++ +ISG A++ ++ LF +M+
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 170/345 (49%), Gaps = 26/345 (7%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+L+ Y GN +AEK+F P D S+N M+ Y+ A+KL+ +M DG
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHP--DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASST 192
PD ++ ++L +++ + +H + + G + +++ N LL Y C S
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLG-KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
L A++ FD + +KD SW TM+ G+VR D+ +A+ + D M V+WN
Sbjct: 287 L---------AKRAFD--AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWN 335
Query: 253 AMISGYVRHGLYEEAF-DTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+++ GY + G + + F +M + ++ D T SLIS + N G + GR +H V+
Sbjct: 336 SLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVI 395
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
R ++ + F+ S ALI Y KCG + +A VF +D+ W ++++G +
Sbjct: 396 RLQLK-GDAFLSS---ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQ 451
Query: 371 EAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+A +F + E N +T +++ + SG EE L +FN MK
Sbjct: 452 QALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 157/340 (46%), Gaps = 53/340 (15%)
Query: 73 SRTTLLSAYSAAGNVKLAEKLF-NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
SR SA + N+ LA+ LF N TP + YN M+ A S + + L+ M
Sbjct: 70 SRLIFFSAITYPENLDLAKLLFLNFTPNP--NVFVYNTMISAVSSS--KNECFGLYSSMI 125
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
R +PD +F ++ A S ++E +Q+HC ++ G + + + L
Sbjct: 126 RHRVSPDRQTFLYLMKASSFLSE----VKQIHCHIIVSGCLSLGNYL------------- 168
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
W +++ Y+ + A K+ M HP ++
Sbjct: 169 ----------------------------WNSLVKFYMELGNFGVAEKVFARMPHPDVSSF 200
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N MI GY + G EA + KM S GI+ DEYT SL+ + G+ +H ++ R
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
S + ILS NAL+ Y KC + A+ FD M +D+ SWN ++ G++ +E
Sbjct: 261 RGPVYSSNLILS--NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLK-LFNQM 410
A+ +F ++P+R+L++W ++ G ++ G + +++ LF +M
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 155/372 (41%), Gaps = 62/372 (16%)
Query: 23 LARAIHAHILTTG--FRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
L + +H I G + ++ N L+D+Y K A FD D+ S T++
Sbjct: 250 LGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVG 309
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS-HNLDGHAAVKLFVRMK-RDGFAPD 138
+ G+++ A+ +F+ P RD +S+N+++ YS D +LF M + PD
Sbjct: 310 FVRLGDMEAAQAVFDQMPK--RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPD 367
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
+ +++ + E H + +H V++ + + + L+ Y C
Sbjct: 368 RVTMVSLISGAANNGELS-HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG--------- 417
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
++ A +F A ++KD WT+ MI+G
Sbjct: 418 IIERAFMVFKTA--TEKDVALWTS-------------------------------MITGL 444
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQP- 316
HG ++A F +M G+ + T ++++A ++GL G + ++ + P
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFD-KMPVRDLVS-WNAILSGYINARRLEEAKF 374
+EH+ +L+ + G++ +A+++ KMP+R S W +ILS +E A+
Sbjct: 505 TEHY-----GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAEL 559
Query: 375 IFREV----PER 382
E+ PE+
Sbjct: 560 ALTELLKLEPEK 571
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 152/351 (43%), Gaps = 59/351 (16%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI 105
LI I S + AH LFD+ P PD FS +LS Y N + A+ F+ P +D
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--FKDAA 156
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
S+N M+ Y+ + A +LF M + +
Sbjct: 157 SWNTMITGYARRGEMEKARELFYSM-------------------------------MEKN 185
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
V W N ++S YI C + A F AP+ + +WT MI
Sbjct: 186 EVSW---------NAMISGYIECGD---------LEKASHFFKVAPV--RGVVAWTAMIT 225
Query: 226 GYVRNDDLASARKLLDGMT-HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
GY++ + A + MT + V WNAMISGYV + E+ FR M GI+ +
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
+S + GRQ+H V ++ + ++ +LI+ Y KCG+L A ++
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCND----VTALTSLISMYCKCGELGDAWKL 341
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL-TWTVMISGL 394
F+ M +D+V+WNA++SGY ++A +FRE+ + + W ++ L
Sbjct: 342 FEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 51/310 (16%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I Y + ++ A H F P + + T +++ Y A V+LAE +F V ++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN-KN 248
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+++NAM+ Y N +KLF M +G P+ S+ L C +L
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG----------CSEL- 297
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
S L + + STL D + T++
Sbjct: 298 ------------SALQLGRQIHQIVSKSTLC--------------------NDVTALTSL 325
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I+ Y + +L A KL + M VAWNAMISGY +HG ++A FR+M I+ D
Sbjct: 326 ISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDW 385
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQA 341
T+ +++ A + GL N G ++R V+P +H+ ++ + GKL +A
Sbjct: 386 ITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY-----TCMVDLLGRAGKLEEA 440
Query: 342 REVFDKMPVR 351
++ MP R
Sbjct: 441 LKLIRSMPFR 450
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH-GLYEEAFDTFRKMHSMGI 279
+IA VR+ D+ A ++ GM + WN+++ G + EA F ++
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP---- 120
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ D ++Y ++S F + ++ R + + + N +IT Y + G++
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFE---KAQSFFDRMPFKDAASW-----NTMITGYARRGEME 172
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
+ARE+F M ++ VSWNA++SGYI LE+A F+ P R ++ WT MI+G ++
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKK 232
Query: 400 GEESLKLFNQM 410
E + +F M
Sbjct: 233 VELAEAMFKDM 243
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 183/420 (43%), Gaps = 58/420 (13%)
Query: 8 NLFLAQLNHPSA---TQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD 64
N+ L + P A T +L + +H +T+ + N L+D+Y K + A+ +F
Sbjct: 229 NITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFS 288
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHA 122
D+ S +++ YS G + A +LF D ++++A + Y+ G+
Sbjct: 289 NMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS------ 176
A+ + +M G P+ + +VL + + H +++HC +K+ + +
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVG-ALMHGKEIHCYAIKYPIDLRKNGHGDEN 407
Query: 177 -VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
V+N L+ Y C + +AR +FD ++D +WT MI GY ++ D
Sbjct: 408 MVINQLIDMYAKCKK---------VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A +LL M +EE T + + +T + + A +
Sbjct: 459 ALELLSEM--------------------FEEDCQT---------RPNAFTISCALVACAS 489
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+Q+HAY LR F V+N LI Y KCG + AR VFD M ++ V+
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLF---VSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
W ++++GY EEA IF E+ +T V++ + SG ++ ++ FN+MK
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 157/340 (46%), Gaps = 54/340 (15%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+S Y + G + A L P + +N+++++Y N + + LF M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN-TLLSCYICCASSTLVE 195
PD ++F V A I+ V C S +L++ +I
Sbjct: 125 PDNYTFPFVFKACGEISS----------------VRCGESAHALSLVTGFI--------- 159
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
S V + +A ++A Y R L+ ARK+ D M+ V+WN++I
Sbjct: 160 SNVFVGNA-------------------LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 256 SGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
Y + G + A + F +M + G + D T +++ + G + G+QLH + + + +
Sbjct: 201 ESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ + V N L+ Y KCG + +A VF M V+D+VSWNA+++GY R E+A
Sbjct: 261 IQN----MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 375 IFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+F ++ E +++TW+ ISG A+ G G E+L + QM
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 30/330 (9%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F L++ YS ++ A K+F+ +++ D +S+N+++++Y+ A+++F R
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFD--EMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 130 MKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M + G PD + VL + + +QLHC V ++ V N L+ Y C
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI- 247
+M A +F +S KD SW M+AGY + A +L + M
Sbjct: 278 G---------MMDEANTVFSN--MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 248 ---AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
V W+A ISGY + GL EA R+M S GI+ +E T S++S + G G++
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 305 LHAYV------LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM--PVRDLVSW 356
+H Y LR E+ ++ N LI Y KC K+ AR +FD + RD+V+W
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVI---NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Query: 357 NAILSGYINARRLEEAKFIFREVPERNLLT 386
++ GY +A + E+ E + T
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 56/312 (17%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ Y+ V A +F++ RD +++ M+ YS + D + A++L M +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 137 --PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP-SVLNTLLSCYICCASSTL 193
P+ F+ S L A + +A +Q+H ++ VP V N L+ Y C S
Sbjct: 473 TRPNAFTISCALVACASLAALRIG-KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS--- 528
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
++ AR + D M V W +
Sbjct: 529 ---------------------------------------ISDARLVFDNMMAKNEVTWTS 549
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+++GY HG EEA F +M +G ++D T ++ A ++G+ + G + + ++TV
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME-YFNRMKTV 608
Query: 314 --VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRL 369
V P EH+ L+ + G+L A + ++MP+ V W A LS ++
Sbjct: 609 FGVSPGPEHYA-----CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
Query: 370 EEAKFIFREVPE 381
E ++ ++ E
Sbjct: 664 ELGEYAAEKITE 675
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 168/393 (42%), Gaps = 89/393 (22%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +HAH++ TG+ + + +LI + C + I Y H LF P PD F
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDF------------ 73
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
LFN+ I + ++ H V + RM +P ++F++
Sbjct: 74 --------LFNSV-------IKSTSKLRLPLH------CVAYYRRMLSSNVSPSNYTFTS 112
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
V+ + C L + GV C V L Y+ A
Sbjct: 113 VIKS----------CADLSALRIGKGVHCHAVVSGFGLDTYVQAA--------------- 147
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
++ Y + D+ AR++ D M VAWN+++SG+ ++GL
Sbjct: 148 ------------------LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA 189
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
+EA F +M G + D T+ SL+SA TG + G +H Y++ SE L+V
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII------SEGLDLNV 243
Query: 325 --NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV--- 379
ALI Y++CG + +AREVFDKM ++ +W A++S Y ++A +F ++
Sbjct: 244 KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDD 303
Query: 380 --PERNLLTWTVMISGLAESGFGEESLKLFNQM 410
P N +T+ ++S A +G EE ++ +M
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 60/265 (22%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + + L++ YS G+++ A ++F+ P + +++N++V + N A+++F +
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPE--KSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 130 MKRDGFAPDPFSFSTVL------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
M+ GF PD +F ++L GA+SL W +H ++ G+ LN L
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSL---GSW----VHQYIISEGLD-----LNVKLG 246
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
T +I Y R D+ AR++ D M
Sbjct: 247 -------------------------------------TALINLYSRCGDVGKAREVFDKM 269
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCG 302
AW AMIS Y HG ++A + F KM G + T+ +++SA + GL G
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 303 RQLHAYVLRT--VVQPSEHFILSVN 325
R ++ + ++ ++ EH + V+
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVD 354
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 173/416 (41%), Gaps = 87/416 (20%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N L+ Y K+ I A ++F+ P ++ S T ++ Y G V AE LF P R+
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE--RN 140
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+S+ M + A KL+ M D + + ++G + C++
Sbjct: 141 EVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGL---------CREGR 187
Query: 164 CD-------------VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA 210
D VV W M N + ARKLF+
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV------------------ARKLFEVM 229
Query: 211 PLSQKDEPSWTTMIAGYV---RNDD----------------------------LASARKL 239
P +K E SWT+M+ GY R +D ++ AR++
Sbjct: 230 P--EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRV 287
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D M W MI Y R G EA D F +M G++ + S++S
Sbjct: 288 FDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASL 347
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
GRQ+HA+++R + V + L+T Y KCG+LV+A+ VFD+ +D++ WN+I
Sbjct: 348 QYGRQVHAHLVRCQFDDDVY----VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 360 LSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+SGY + EEA IF E+P N +T +++ + +G EE L++F M+
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 117/212 (55%), Gaps = 14/212 (6%)
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
L AR+LFDE +S+++ SW +++GY++N + AR + + M V+W AM+ GY
Sbjct: 63 LPKEARQLFDE--MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++ G+ EA F +M + +E ++T + + G + R+L+ + P +
Sbjct: 121 MQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYD------MMPVK 170
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
+ S N +I + G++ +AR +FD+M R++V+W +++GY R++ A+ +F
Sbjct: 171 DVVASTN--MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 379 VPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+PE+ ++WT M+ G SG E++ + F M
Sbjct: 229 MPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 12/156 (7%)
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
IS R G EA F + I ++ S++S F+ GL RQL
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNGLPKEARQLFD------- 72
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ SE ++S N L++ Y K +V+AR VF+ MP R++VSW A++ GY+ + EA+
Sbjct: 73 EMSERNVVSWN-GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 375 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F +PERN ++WTVM GL + G +++ KL++ M
Sbjct: 132 LFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 45/210 (21%)
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
ARK FD L K SW ++++GY N AR+L D M+ V+WN ++SGY+++
Sbjct: 35 EARKFFD--SLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+ EA + F M R VV +
Sbjct: 93 RMIVEARNVFELMPE----------------------------------RNVVSWT---- 114
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
A++ Y + G + +A +F +MP R+ VSW + G I+ R+++A+ ++ +P
Sbjct: 115 -----AMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV 169
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++++ T MI GL G +E+ +F++M+
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 140/339 (41%), Gaps = 57/339 (16%)
Query: 50 YCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
Y S I A F+ P + + ++ + G + A ++F+ + RD ++
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL--MEDRDNATWRG 301
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW 169
M+KAY A+ LF +M++ G P S ++L + +A ++ +Q+H +V+
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG-RQVHAHLVRC 360
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
V + L++ Y+ C + A+ +FD S KD W
Sbjct: 361 QFDDDVYVASVLMTMYVKCGE---------LVKAKLVFDR--FSSKDIIMW--------- 400
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
N++ISGY HGL EEA F +M S G ++ T ++
Sbjct: 401 ----------------------NSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAI 438
Query: 290 ISASFNTGLFNCGRQL-HAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDK 347
++A G G ++ + + V P+ EH+ +V+ + G++ +A E+ +
Sbjct: 439 LTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD-----MLGRAGQVDKAMELIES 493
Query: 348 MPVR-DLVSWNAILSGYINARRLE----EAKFIFREVPE 381
M ++ D W A+L RL+ AK +F P+
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPD 532
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 54/355 (15%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ P + RT LL Y ++ A K+ + P ++ +S+ AM+ YS
Sbjct: 77 HMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE--KNVVSWTAMISRYSQTGHS 134
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ +F M R P+ F+F+TVL + + A +Q+H +VKW
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTS-CIRASGLGLGKQIHGLIVKWNY--------- 184
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
+S + + S +++ Y + + AR++
Sbjct: 185 --------------DSHIFVGS-------------------SLLDMYAKAGQIKEAREIF 211
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
+ + V+ A+I+GY + GL EEA + F ++HS G+ + TY SL++A L +
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
G+Q H +VLR + F + N+LI Y+KCG L AR +FD MP R +SWNA+L
Sbjct: 272 HGKQAHCHVLRRELP----FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAML 327
Query: 361 SGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQM 410
GY E +FR + + + +T ++SG + + L +F+ M
Sbjct: 328 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 178/397 (44%), Gaps = 56/397 (14%)
Query: 18 SATQTL--ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRT 75
S T+ L + +H HI T+GF +I NRL+ +Y K ++ A +FD+ PN D+ S
Sbjct: 96 SQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWN 155
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR-DG 134
+++ Y+ G ++ A KLF+ +T +D+ S+ AMV Y A+ L+ M+R
Sbjct: 156 VMVNGYAEVGLLEEARKLFDE--MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPN 213
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ F+ S + A + + +++H +V+ G+
Sbjct: 214 SRPNIFTVS-IAVAAAAAVKCIRRGKEIHGHIVRAGL----------------------- 249
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
DE W++++ Y + + AR + D + V+W +M
Sbjct: 250 -------------------DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSM 290
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I Y + + E F F ++ + +EYT+ +++A + G+Q+H Y+ R
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA-- 372
P +++L+ YTKCG + A+ V D P DLVSW +++ G + +EA
Sbjct: 351 DPYSF----ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 373 --KFIFREVPERNLLTWTVMISGLAESGFGEESLKLF 407
+ + + + +T+ ++S +G E+ L+ F
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
TY +LI T G+++H ++ + P + + N L+ Y KCG LV AR+V
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPG----IVIWNRLLRMYAKCGSLVDARKV 142
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 404
FD+MP RDL SWN +++GY LEEA+ +F E+ E++ +WT M++G + EE+L
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 405 KLFNQMK 411
L++ M+
Sbjct: 203 VLYSLMQ 209
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 49/240 (20%)
Query: 174 VPSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
VP ++ N LL Y C S + ARK+FDE P +D SW M+ GY
Sbjct: 117 VPGIVIWNRLLRMYAKCGS---------LVDARKVFDEMP--NRDLCSWNVMVNGYAEVG 165
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLI 290
L ARKL D MT + +W AM++GYV+ EEA + M + + + +T + +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 291 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 350
+A+ G+++H +++R + E + ++L+ Y KCG +
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDE----VLWSSLMDMYGKCGCI------------ 269
Query: 351 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+EA+ IF ++ E+++++WT MI +S E LF+++
Sbjct: 270 -------------------DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 167/331 (50%), Gaps = 25/331 (7%)
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
++ A K+F+ P D IS A++ + A + F R+ G P+ F+F TV+
Sbjct: 43 IRNAHKVFDEIPEL--DVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
G+ S + + +QLHC +K G+ V + +L+CY+ STL + AR+
Sbjct: 101 GS-STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYV--KLSTLTD-------ARRC 150
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
FD+ + S T +I+GY++ + A L M V WNA+I G+ + G EE
Sbjct: 151 FDDT--RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 267 AFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
A +TF M G+ + +E T+ I+A N G+ +HA ++ + + F + V
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFL---GKRFNVFVW 265
Query: 326 NALITFYTKCGKLVQAREVFDKM--PVRDLVSWNAILSGYINARRLEEAKFIFRE-VPER 382
N+LI+FY+KCG + + F+K+ R++VSWN+++ GY + R EEA +F + V +
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT 325
Query: 383 NLLTWTVMISGL----AESGFGEESLKLFNQ 409
NL V I G+ +G +E FN+
Sbjct: 326 NLRPNNVTILGVLFACNHAGLIQEGYMYFNK 356
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
RK A P+ + ++ +D + +A K+ D + ++ A+I +V+
Sbjct: 14 RKYHSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESR 73
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+ EA F+++ +GI+ +E+T+ ++I +S + G+QLH Y L+ + + +
Sbjct: 74 HVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASN----VF 129
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V +A++ Y K L AR FD ++VS ++SGY+ EEA +FR +PER+
Sbjct: 130 VGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERS 189
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQM 410
++TW +I G +++G EE++ F M
Sbjct: 190 VVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 139/348 (39%), Gaps = 56/348 (16%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + +H + L G + + +++ Y K S + A FD T +P++ S T L+S Y
Sbjct: 111 LGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYL 170
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPFS 141
+ A LF A P R +++NA++ +S AV FV M R+G P+ +
Sbjct: 171 KKHEFEEALSLFRAMPE--RSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKW-GVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
F + A+S IA + +H +K+ G V N+L+S Y C + M
Sbjct: 229 FPCAITAISNIASHG-AGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN---------M 278
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
+ F++ Q++ SW +MI GY N
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHN------------------------------ 308
Query: 261 HGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS-- 317
G EEA F KM ++ + T ++ A + GL G + P+
Sbjct: 309 -GRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLL 367
Query: 318 --EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 362
EH+ ++ ++ G+ +A E+ MP+ + W A+L G
Sbjct: 368 ELEHYA-----CMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 157/345 (45%), Gaps = 22/345 (6%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F T + Y++ G + A +F+ ++ RD +++N M++ Y A KLF
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFD--EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK PD ++ A ++ + ++ +++ V +L L++ Y
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYN-RAIYEFLIENDVRMDTHLLTALVTMYAGAG 261
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ S R LF T M++GY + L A+ + D V
Sbjct: 262 CMDMAREFFRKMSVRNLFVS-----------TAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W MIS YV +EA F +M GI+ D + S+ISA N G+ + + +H+ +
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ LS+NNALI Y KCG L R+VF+KMP R++VSW+++++
Sbjct: 371 HVNGLESE----LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA 426
Query: 370 EEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+A +F +E E N +T+ ++ G + SG EE K+F M
Sbjct: 427 SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P ++ +N + R ++++ +G ++D++++ ++ A G +L
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 306 H--AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
H A+ + T+ P V + Y CG++ AR VFD+M RD+V+WN ++ Y
Sbjct: 134 HGVAFKIATLCDP------FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 364 INARRLEEAKFIFREVPERNLL 385
++EA +F E+ + N++
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVM 209
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 50/343 (14%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + +L+ Y+ G + A K+F+ ++ R+ +S+ +M+ Y+ AV LF R
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 130 MKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M RD P+ + V+ A + + + E ++++ + G+ +++ L+ Y+ C
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ + A++LFDE S N DL
Sbjct: 285 NAIDV---------AKRLFDEYGAS----------------NLDLC-------------- 305
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
NAM S YVR GL EA F M G++ D + S IS+ G+ H Y
Sbjct: 306 ---NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
VLR + ++ + NALI Y KC + A +FD+M + +V+WN+I++GY+
Sbjct: 363 VLRNGFESWDN----ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ A F +PE+N+++W +ISGL + EE++++F M+
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 167/392 (42%), Gaps = 54/392 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
++A I +G + L+ + L+D+Y K + I A LFD+
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY----------------G 298
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
A N+ L NAM Y A+ +F M G PD S
Sbjct: 299 ASNLDLC-----------------NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ + + S + W + H V++ G ++ N L+ Y+ C +A
Sbjct: 342 SAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQD---------TA 391
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
++FD +S K +W +++AGYV N ++ +A + + M V+WN +ISG V+ L
Sbjct: 392 FRIFDR--MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 264 YEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+EEA + F M S G+ D T S+ SA + G + + ++ Y+ + +Q +
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ----LDV 505
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
+ L+ +++CG A +F+ + RD+ +W A + A E A +F ++ E+
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 383 NL----LTWTVMISGLAESGFGEESLKLFNQM 410
L + + ++ + G ++ ++F M
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 46/270 (17%)
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
YN++++ Y+ + + A+ LF+RM G +PD ++F L A + + + + Q+H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGNGIQIHGLI 160
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG 226
VK G V N+L+ Y C + SARK+FDE +S+++ SWT+MI G
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGE---------LDSARKVFDE--MSERNVVSWTSMICG 209
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y R D A L FR + + + T
Sbjct: 210 YARRDFAKDAVDLF------------------------------FRMVRDEEVTPNSVTM 239
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+ISA G +++A++ + ++ ++ + +AL+ Y KC + A+ +FD
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV----SALVDMYMKCNAIDVAKRLFD 295
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ +L NA+ S Y+ EA +F
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVF 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+N++I GY GL EA F +M + GI D+YT+ +SA + G Q+H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR-- 368
+ L V N+L+ FY +CG+L AR+VFD+M R++VSW +++ GY ARR
Sbjct: 162 KMGYAKD----LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--ARRDF 215
Query: 369 -LEEAKFIFREVPER----NLLTWTVMISGLAE 396
+ FR V + N +T +IS A+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 60/368 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
++ H ++L GF I N LID+Y K A +FD+ N + + ++++ Y
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFSF 142
G V A + F P ++ +S+N ++ A+++F M+ ++G D +
Sbjct: 416 NGEVDAAWETFETMPE--KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 143 STVLGAMSLIAEEEWHCQQLHC-DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
++ A C L D+ KW + YI
Sbjct: 474 MSIASA----------CGHLGALDLAKW------------IYYYI--------------- 496
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
E Q D TT++ + R D SA + + +T+ AW A I
Sbjct: 497 -------EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPSE-H 319
G E A + F M G++ D + ++A + GL G+++ +L+ V P + H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFRE 378
+ ++ + G L +A ++ + MP+ + V WN++L+ +E A + +
Sbjct: 610 Y-----GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 379 V----PER 382
+ PER
Sbjct: 665 IQVLAPER 672
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 162/343 (47%), Gaps = 50/343 (14%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + +L+ Y+ G + A K+F+ ++ R+ +S+ +M+ Y+ AV LF R
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 130 MKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M RD P+ + V+ A + + + E ++++ + G+ +++ L+ Y+ C
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ + A++LFDE S N DL
Sbjct: 285 NA---------IDVAKRLFDEYGAS----------------NLDLC-------------- 305
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
NAM S YVR GL EA F M G++ D + S IS+ G+ H Y
Sbjct: 306 ---NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
VLR + ++ + NALI Y KC + A +FD+M + +V+WN+I++GY+
Sbjct: 363 VLRNGFESWDN----ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGE 418
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ A F +PE+N+++W +ISGL + EE++++F M+
Sbjct: 419 VDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 167/392 (42%), Gaps = 54/392 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
++A I +G + L+ + L+D+Y K + I A LFD+
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY----------------G 298
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
A N+ L NAM Y A+ +F M G PD S
Sbjct: 299 ASNLDLC-----------------NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ + + S + W + H V++ G ++ N L+ Y+ C +A
Sbjct: 342 SAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCHRQD---------TA 391
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
++FD +S K +W +++AGYV N ++ +A + + M V+WN +ISG V+ L
Sbjct: 392 FRIFDR--MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSL 449
Query: 264 YEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+EEA + F M S G+ D T S+ SA + G + + ++ Y+ + +Q +
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ----LDV 505
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
+ L+ +++CG A +F+ + RD+ +W A + A E A +F ++ E+
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 383 NL----LTWTVMISGLAESGFGEESLKLFNQM 410
L + + ++ + G ++ ++F M
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+N++I GY GL EA F +M + GI D+YT+ +SA + G Q+H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR-- 368
+ L V N+L+ FY +CG+L AR+VFD+M R++VSW +++ GY ARR
Sbjct: 162 KMGYAKD----LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--ARRDF 215
Query: 369 -LEEAKFIFREVPER----NLLTWTVMISGLAE 396
+ FR V + N +T +IS A+
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 46/270 (17%)
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
YN++++ Y+ + + A+ LF+RM G +PD ++F L A + + + + Q+H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGNGIQIHGLI 160
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG 226
VK G V N+L+ Y C + SARK+FDE +S+++ SWT+MI G
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGE---------LDSARKVFDE--MSERNVVSWTSMICG 209
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y R D A L FR + + + T
Sbjct: 210 YARRDFAKDAVDLF------------------------------FRMVRDEEVTPNSVTM 239
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+ISA G +++A++ + ++ ++ + +AL+ Y KC + A+ +FD
Sbjct: 240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV----SALVDMYMKCNAIDVAKRLFD 295
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ +L NA+ S Y+ EA +F
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVF 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 147/368 (39%), Gaps = 60/368 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
++ H ++L GF I N LID+Y K A +FD+ N + + ++++ Y
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPFSF 142
G V A + F P ++ +S+N ++ A+++F M+ ++G D +
Sbjct: 416 NGEVDAAWETFETMPE--KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 143 STVLGAMSLIAEEEWHCQQLHC-DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
++ A C L D+ KW + YI
Sbjct: 474 MSIASA----------CGHLGALDLAKW------------IYYYI--------------- 496
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
E Q D TT++ + R D SA + + +T+ AW A I
Sbjct: 497 -------EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPSE-H 319
G E A + F M G++ D + ++A + GL G+++ +L+ V P + H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFRE 378
+ ++ + G L +A ++ + MP+ + V WN++L+ +E A + +
Sbjct: 610 Y-----GCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 379 V----PER 382
+ PER
Sbjct: 665 IQVLAPER 672
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 169/393 (43%), Gaps = 86/393 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R +HAHIL + FR ++ N L+++Y K ++ A +F+K P D + TTL+S YS
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+ P A+ F +M R G++P+ F+ S
Sbjct: 139 -----------HDRPCD----------------------ALLFFNQMLRFGYSPNEFTLS 165
Query: 144 TVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+V+ A + AE C QLH VK G V + LL Y LM
Sbjct: 166 SVIKAAA--AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG---------LMDD 214
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A+ +FD L +++ SW +IAG+ R A +L GM
Sbjct: 215 AQLVFD--ALESRNDVSWNALIAGHARRSGTEKALELFQGMLR----------------- 255
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
D FR H ++Y SL A +TG G+ +HAY++++ E +
Sbjct: 256 ------DGFRPSH--------FSYASLFGACSSTGFLEQGKWVHAYMIKS----GEKLVA 297
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-- 380
N L+ Y K G + AR++FD++ RD+VSWN++L+ Y +EA + F E+
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 381 --ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
N +++ +++ + SG +E + MK
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMK 390
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 58/292 (19%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+ LL Y+ G + A+ +F+A + R+ +S+NA++ ++ A++LF M RDG
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDA--LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 135 FAPDPFSFSTVLGAMS---LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
F P FS++++ GA S + + +W +H ++K G V NTLL Y S
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKW----VHAYMIKSGEKLVAFAGNTLLDMYAKSGS- 312
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ ARK+FD L+++D SW
Sbjct: 313 --------IHDARKIFDR--LAKRDVVSW------------------------------- 331
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N++++ Y +HG +EA F +M +GI+ +E ++ S+++A ++GL + G + + +
Sbjct: 332 NSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 312 TVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILS 361
+ P H++ ++ + G L +A ++MP+ + W A+L+
Sbjct: 392 DGIVPEAWHYV-----TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
I D Y +L+ L GR +HA++L+++ + H I+ + N L+ Y KCG L
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFR---HDIV-MGNTLLNMYAKCGSL 111
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+AR+VF+KMP RD V+W ++SGY R +A F ++
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ +HA+++ +G +L N L+D+Y KS +I A +FD+ D+ S +LL+AY+
Sbjct: 281 GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 84 AGNVKLAEKLFNA-TPVTLR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
G K A F V +R + IS+ +++ A SH+ + MK+DG P+ +
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 142 FSTVL 146
+ TV+
Sbjct: 401 YVTVV 405
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 162/339 (47%), Gaps = 30/339 (8%)
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
+++ G+++ A K+F+ +PV RD +S+N ++ Y + A+ ++ M+ +G PD
Sbjct: 201 FASCGDMENARKVFDESPV--RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDV 258
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ ++ + S++ + ++ + V + G+ ++N L+ + C +
Sbjct: 259 TMIGLVSSCSMLGDLN-RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD---------I 308
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
AR++FD L ++ SWTTMI+GY R L +RKL D M V WNAMI G V+
Sbjct: 309 HEARRIFDN--LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
++A F++M + + DE T +SA G + G +H Y+ E +
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI--------EKY 418
Query: 321 ILSVNNA----LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
LS+N A L+ Y KCG + +A VF + R+ +++ AI+ G A F
Sbjct: 419 SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYF 478
Query: 377 REVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
E+ + + +T+ ++S G + F+QMK
Sbjct: 479 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 140/342 (40%), Gaps = 53/342 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ + ++ G R+T + N L+D++ K +I A +FD I S TT++S Y+
Sbjct: 276 GKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYAR 335
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G + ++ KLF+ + +D + +NAM+ G A+ LF M+ PD +
Sbjct: 336 CGLLDVSRKLFD--DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMI 393
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
L A C QL G + V ++ + Y + L
Sbjct: 394 HCLSA----------CSQL-------GALDVGIWIHRYIEKYSLSLNVAL---------- 426
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
T+++ Y + +++ A + G+ ++ + A+I G HG
Sbjct: 427 ----------------GTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQPS-EHFI 321
A F +M GI DE T+ L+SA + G+ GR + + R + P +H+
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHY- 529
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
+ ++ + G L +A + + MP+ D W A+L G
Sbjct: 530 ----SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI---QMDEYTYTSLISASF 294
K+L G+ +P +WN I G+ +E+F +++M G + D +TY L
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
+ L + G + +VL+ ++ H V+NA I + CG + AR+VFD+ PVRDLV
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSH----VHNASIHMFASCGDMENARKVFDESPVRDLV 223
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
SWN +++GY E+A ++++ + + V + GL S
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 167/345 (48%), Gaps = 54/345 (15%)
Query: 21 QTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
++L R +HA I+ L ++ L+D Y KS + A +F+ + ++ T+++S
Sbjct: 156 RSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISG 215
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFVRMKRDGFAPDP 139
Y G V+ AE++FN T V +D + YNAMV+ +S + + +V +++ M+R GF P+
Sbjct: 216 YMNQGFVEDAEEIFNTTKV--KDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNI 273
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+F++V+GA S++ E QQ+H ++K GV + ++LL Y C
Sbjct: 274 STFASVIGACSVLTSHEVG-QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG--------- 323
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ AR++FD+ + +K+ SWT+MI GY +N
Sbjct: 324 INDARRVFDQ--MQEKNVFSWTSMIDGYGKN----------------------------- 352
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS- 317
G EEA + F +M I+ + T+ +SA ++GL + G ++ + R ++P
Sbjct: 353 --GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
EH+ ++ + G L +A E MP R D W A+LS
Sbjct: 411 EHYA-----CIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS 450
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 182/420 (43%), Gaps = 63/420 (15%)
Query: 3 SRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHL 62
++ +A +N P+ + IHA I+ TGF+ I +L+ ++ K + YA +
Sbjct: 34 AKYIAGALQEHINSPAPKA--GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQV 91
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
FD+ P P + + ++S Y G VK E L
Sbjct: 92 FDELPKPTLSAYNYMISGYLKHGLVK--ELLL---------------------------- 121
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAM----SLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
L RM G D ++ S VL A S + C+ +H ++K V ++
Sbjct: 122 ---LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLI 178
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASA 236
L+ Y+ + SAR +F+ + KDE T+MI+GY+ + A
Sbjct: 179 TALVDTYVKSGK---------LESARTVFE----TMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHG-LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
++ + V +NAM+ G+ R G + + D + M G + T+ S+I A
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+Q+HA ++++ V + + + ++L+ Y KCG + AR VFD+M +++ S
Sbjct: 286 LTSHEVGQQVHAQIMKSGV----YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 356 WNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
W +++ GY EEA +F + E N +T+ +S + SG ++ ++F M+
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 63/344 (18%)
Query: 107 YNAMVKAY---SHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
YNA+ K + SH + +++L+VRM RD +P +++S+++ A S + + L
Sbjct: 839 YNALFKGFVTCSHPI---RSLELYVRMLRDSVSPSSYTYSSLVKASSFASR---FGESLQ 892
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
+ K+G + TL+ Y A+ + E ARK+FDE P ++D+ +WTTM
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFY--SATGRIRE-------ARKVFDEMP--ERDDIAWTTM 941
Query: 224 IAGYVRNDDLASARKLLDGMTH-----------------------------PIA--VAWN 252
++ Y R D+ SA L + M+ P+ ++W
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWT 1001
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
MI GY ++ Y EA F KM GI DE T +++ISA + G+ G+++H Y L+
Sbjct: 1002 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 1061
Query: 313 VVQPSEHFILSV--NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
F+L V +AL+ Y+KCG L +A VF +P ++L WN+I+ G +
Sbjct: 1062 ------GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1115
Query: 371 EAKFIFR----EVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
EA +F E + N +T+ + + +G +E +++ M
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 160/391 (40%), Gaps = 84/391 (21%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
++ AHI GF I+ LID Y + I A +FD+ P D + TT++SAY
Sbjct: 887 FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYR 946
Query: 83 -------------------------------AAGNVKLAEKLFNATPVTLRDTISYNAMV 111
GN++ AE LFN PV +D IS+ M+
Sbjct: 947 RVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV--KDIISWTTMI 1004
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV 171
K YS N A+ +F +M +G PD + STV+ A + + E +++H ++ G
Sbjct: 1005 KGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI-GKEVHMYTLQNGF 1063
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
+ + + L+ Y C S + A +F P
Sbjct: 1064 VLDVYIGSALVDMYSKCGS---------LERALLVFFNLP-------------------- 1094
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+K L WN++I G HG +EA F KM ++ + T+ S+ +
Sbjct: 1095 -----KKNL--------FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 292 ASFNTGLFNCGRQLHAYVLR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
A + GL + GR+++ ++ ++V EH+ ++ ++K G + +A E+ M
Sbjct: 1142 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY-----GGMVHLFSKAGLIYEALELIGNME 1196
Query: 350 VR-DLVSWNAILSGYINARRLEEAKFIFREV 379
+ V W A+L G + L A+ F ++
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 37/199 (18%)
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
M P +NA+ G+V + + + +M + YTY+SL+ AS F G
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--G 888
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW------ 356
L A++ + F + + LI FY+ G++ +AR+VFD+MP RD ++W
Sbjct: 889 ESLQAHIWKFGFG----FHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSA 944
Query: 357 -------------------------NAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 391
N +++GY+ LE+A+ +F ++P +++++WT MI
Sbjct: 945 YRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMI 1004
Query: 392 SGLAESGFGEESLKLFNQM 410
G +++ E++ +F +M
Sbjct: 1005 KGYSQNKRYREAIAVFYKM 1023
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 158/320 (49%), Gaps = 23/320 (7%)
Query: 99 VTLRDTISYNAMVKAYS-HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
+T T +N +++ + H ++ + FV M+R PD +F V A + +
Sbjct: 74 ITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDL 133
Query: 158 H-CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
+ LHC +++G++ LNTL+ Y A P+ SA +LFDE P Q+D
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIA-------PI--DSALQLFDENP--QRD 182
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
++ +I G V+ ++ AR+L D M V+WN++ISGY + EA F +M +
Sbjct: 183 VVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS-VNNALITFYTKC 335
+G++ D S +SA +G + G+ +H Y R + FI S + L+ FY KC
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL-----FIDSFLATGLVDFYAKC 297
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMI 391
G + A E+F+ + L +WNA+++G E FR++ + +T+ ++
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 392 SGLAESGFGEESLKLFNQMK 411
G + SG +E+ LF+QM+
Sbjct: 358 VGCSHSGLVDEARNLFDQMR 377
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 169/416 (40%), Gaps = 62/416 (14%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D T +F A + TL + +H L G N LI +Y + I A
Sbjct: 114 DFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ 173
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LFD+ P D+ + L+ A + A +LF++ P LRD +S+N+++ Y+
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP--LRDLVSWNSLISGYAQMNHCR 231
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT- 180
A+KLF M G PD + + L A + +W + D K + + S L T
Sbjct: 232 EAIKLFDEMVALGLKPDNVAIVSTLSACA--QSGDWQKGKAIHDYTKRKRLFIDSFLATG 289
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y C + +A ++F +L S + L
Sbjct: 290 LVDFYAKCG---------FIDTAMEIF------------------------ELCSDKTLF 316
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
WNAMI+G HG E D FRKM S GI+ D T+ S++ ++GL +
Sbjct: 317 ---------TWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 301 CGRQLHAYV--LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-----RDL 353
R L + L V + +H+ + + G + +A E+ ++MP L
Sbjct: 368 EARNLFDQMRSLYDVNREMKHY-----GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKL 422
Query: 354 VSWNAILSG---YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
++W+ +L G + N E+A + + + + VM+ A + EE +K+
Sbjct: 423 LAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKV 478
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 26/347 (7%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + +L+ Y++ G +++ K+F+ P RD +S+N ++ +Y N A+ +F R
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMP--QRDVVSWNGLISSYVGNGRFEDAIGVFKR 137
Query: 130 MKRD-GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M ++ D + + L A S + E ++++ VV M V + N L+ + C
Sbjct: 138 MSQESNLKFDEGTIVSTLSACSALKNLEIG-ERIYRFVVTEFEMSV-RIGNALVDMFCKC 195
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ AR +FD + K+ WT+M+ GYV + AR L +
Sbjct: 196 GC---------LDKARAVFD--SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V W AM++GYV+ ++EA + FR M + GI+ D + SL++ TG G+ +H Y
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY----I 364
+ V + V AL+ Y KCG + A EVF ++ RD SW +++ G +
Sbjct: 305 INENRVTVDK----VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM 360
Query: 365 NARRLEEAKFIFREVPER-NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ R L + + V R + +T+ +++ GF E K+F+ M
Sbjct: 361 SGRAL-DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSM 406
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 59/311 (18%)
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLH 163
YN M+K+ + + LF ++ G PD F+ VL G + + E E ++H
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE----KVH 69
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
VK G+ V N+L+ Y AS +E K+FDE P Q+D
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMY---ASLGKIEI------THKVFDEMP--QRD------- 111
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMD 282
V+WN +IS YV +G +E+A F++M ++ D
Sbjct: 112 ------------------------VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFD 147
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV--NNALITFYTKCGKLVQ 340
E T S +SA G +++ +V+ F +SV NAL+ + KCG L +
Sbjct: 148 EGTIVSTLSACSALKNLEIGERIYRFVVT-------EFEMSVRIGNALVDMFCKCGCLDK 200
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
AR VFD M +++ W +++ GY++ R++EA+ +F P ++++ WT M++G +
Sbjct: 201 ARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRF 260
Query: 401 EESLKLFNQMK 411
+E+L+LF M+
Sbjct: 261 DEALELFRCMQ 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 52/319 (16%)
Query: 32 LTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAE 91
+ T F ++ I N L+D++CK + A +FD + ++ T+++ Y + G + A
Sbjct: 174 VVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEAR 233
Query: 92 KLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL 151
LF +PV +D + + AM+ Y A++LF M+ G PD F ++L +
Sbjct: 234 VLFERSPV--KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 152 IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAP 211
E + +H + + V V L+ Y C + +A ++F E
Sbjct: 292 TGALE-QGKWIHGYINENRVTVDKVVGTALVDMYAKCGC---------IETALEVFYE-- 339
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 271
+ ++D SWT++I G N G+ A D +
Sbjct: 340 IKERDTASWTSLIYGLAMN-------------------------------GMSGRALDLY 368
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQP-SEHFILSVNNALI 329
+M ++G+++D T+ ++++A + G GR++ H+ R VQP SEH + LI
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC-----SCLI 423
Query: 330 TFYTKCGKLVQAREVFDKM 348
+ G L +A E+ DKM
Sbjct: 424 DLLCRAGLLDEAEELIDKM 442
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 61/330 (18%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ +L+S Y G AEK+F P RD +S+N+M+ Y DG +++ LF
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPE--RDIVSWNSMISGYLALGDGFSSLMLFKE 221
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAE----EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
M + GF PD FS + LGA S + +E HC + + VM + S+L+
Sbjct: 222 MLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM----- 276
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
Y + +++ A ++ +GM
Sbjct: 277 -----------------------------------------YSKYGEVSYAERIFNGMIQ 295
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQ 304
VAWN MI Y R+G +AF F+KM G+Q D T +L+ AS + GR
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS---AILE-GRT 351
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H Y +R P H +L ALI Y +CG+L A +FD+M ++++SWN+I++ Y+
Sbjct: 352 IHGYAMRRGFLP--HMVLET--ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGL 394
+ A +F+E+ + +L+ + I+ +
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASI 437
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
Q ++P+ T + G+ + + A +L D M A WN MI G+ GLY EA + +
Sbjct: 61 QVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
M G++ D +TY +I + G+++HA V++ + V N+LI+ Y
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVY----VCNSLISLYM 176
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
K G A +VF++MP RD+VSWN+++SGY+
Sbjct: 177 KLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 163/359 (45%), Gaps = 58/359 (16%)
Query: 58 YAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN 117
+ H + + D+ T++L YS G V AE++FN + R+ +++N M+ Y+ N
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNG--MIQRNIVAWNVMIGCYARN 311
Query: 118 LDGHAAVKLFVRM-KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS 176
A F +M +++G PD + +L A +++ + +H ++ G +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL-----EGRTIHGYAMRRGFLPHMV 366
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
+ L+ Y C + SA +FD +++K+ SW ++IA YV+N SA
Sbjct: 367 LETALIDMYGECGQ---------LKSAEVIFDR--MAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
+ L++E +D+ + D T S++ A +
Sbjct: 416 LE------------------------LFQELWDS-------SLVPDSTTIASILPAYAES 444
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 356
+ GR++HAY++++ S IL N+L+ Y CG L AR+ F+ + ++D+VSW
Sbjct: 445 LSLSEGREIHAYIVKSRYW-SNTIIL---NSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 357 NAILSGYINARRLEEAKFIFRE-VPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N+I+ Y + ++F E + R N T+ +++ + SG +E + F MK
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 137/292 (46%), Gaps = 50/292 (17%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D +N M+K ++ AV+ + RM G D F++ V+ +++ I+ E +++
Sbjct: 94 DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLE-EGKKI 152
Query: 163 HCDVVKWGVMCVPSVLNTLLSCY--ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
H V+K G + V N+L+S Y + CA A K+F+E P ++D SW
Sbjct: 153 HAMVIKLGFVSDVYVCNSLISLYMKLGCA-----------WDAEKVFEEMP--ERDIVSW 199
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+MI+GY+ L DG + + F++M G +
Sbjct: 200 NSMISGYL---------ALGDGFS----------------------SLMLFKEMLKCGFK 228
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D ++ S + A + G+++H + +R+ ++ + +++ +++ Y+K G++
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT---SILDMYSKYGEVSY 285
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 392
A +F+ M R++V+WN ++ Y R+ +A F+++ E+N L V+ S
Sbjct: 286 AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 175/394 (44%), Gaps = 63/394 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IHA L G ++ L+ +Y + I A FD + S +LL Y
Sbjct: 123 GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLE 182
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+G + A ++F+ P +D +S+N ++ +Y+ D A LF
Sbjct: 183 SGELDEARRVFDKIPE--KDAVSWNLIISSYAKKGDMGNACSLF---------------- 224
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
AM L + W N L+ Y+ C M A
Sbjct: 225 ---SAMPLKSPASW---------------------NILIGGYVNCRE---------MKLA 251
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
R FD P QK+ SW TMI+GY + D+ SA +L M+ + ++AMI+ Y ++G
Sbjct: 252 RTYFDAMP--QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGK 309
Query: 264 YEEAFDTFRKM--HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
++A F +M + IQ DE T +S++SA+ G + G + +Y+ ++ + +
Sbjct: 310 PKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD--L 367
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
LS +LI Y K G +A ++F + +D VS++A++ G EA +F + E
Sbjct: 368 LST--SLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 382 R----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ N++T+T ++S + SG +E K FN MK
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 137/324 (42%), Gaps = 60/324 (18%)
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
VK K FN D+ S+ +V+ S + V +++ M G P + ++VL
Sbjct: 57 VKRILKGFNG-----HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVL 111
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A + E + +H +K G+ V L+ Y L A+K
Sbjct: 112 RACGKM-ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIEL---------AKKA 161
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
FD+ +++K+ SW +++ GY+ + +L AR++ D + AV+WN +IS Y + G
Sbjct: 162 FDD--IAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGN 219
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A F M + P+ N
Sbjct: 220 ACSLFSAM-------------------------------------PLKSPASW------N 236
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLT 386
LI Y C ++ AR FD MP ++ VSW ++SGY ++ A+ +FR + +++ L
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 387 WTVMISGLAESGFGEESLKLFNQM 410
+ MI+ ++G +++LKLF QM
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQM 320
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 143/326 (43%), Gaps = 54/326 (16%)
Query: 39 TPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATP 98
+P N LI Y + A FD P + S T++S Y+ G+V+ AE+LF
Sbjct: 231 SPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRL-- 288
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM-KRDGF-APDPFSFSTVLGAMSLIAEEE 156
++ +D + Y+AM+ Y+ N A+KLF +M +R+ + PD + S+V+ A S +
Sbjct: 289 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG--- 345
Query: 157 WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
NT ++ S + E + + D
Sbjct: 346 ----------------------NTSFGTWV---ESYITEHGIKI---------------D 365
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
+ T++I Y++ D A A K+ + V+++AMI G +G+ EA F M
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKC 335
I + T+T L+SA ++GL G + + ++PS +H+ ++ +
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHY-----GIMVDMLGRA 480
Query: 336 GKLVQAREVFDKMPVR-DLVSWNAIL 360
G+L +A E+ MP++ + W A+L
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALL 506
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 178/402 (44%), Gaps = 60/402 (14%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSN----IPYAHHLFDKTPNPDIFSR 74
+ Q + IHA +L TG + + +C SS +PYA +FD PD F
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYAQIVFDGFDRPDTFL- 82
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+N M++ +S + + ++ L+ RM
Sbjct: 83 --------------------------------WNLMIRGFSCSDEPERSLLLYQRMLCSS 110
Query: 135 FAPDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
+ ++F ++L A S L A EE Q+H + K G +N+L++ Y + L
Sbjct: 111 APHNAYTFPSLLKACSNLSAFEE--TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL 168
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
A LFD P + D+ SW ++I GYV+ + A L M A++W
Sbjct: 169 ---------AHLLFDRIP--EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTT 217
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
MISGYV+ + +EA F +M + ++ D + + +SA G G+ +H+Y+ +T
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
++ + LI Y KCG++ +A EVF + + + +W A++SGY EA
Sbjct: 278 IRMDS----VLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAI 333
Query: 374 FIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
F E+ + N++T+T +++ + +G EE +F M+
Sbjct: 334 SKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 375
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 187/418 (44%), Gaps = 56/418 (13%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+DS T++ L + + S+ R +H + G + N LI Y K ++
Sbjct: 283 VDSFTLSTLLSSCTD--SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVE 340
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
L++ D + T +++AY + G V A ++F VT ++TI+YNA++ + N G
Sbjct: 341 SLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF--ANVTEKNTITYNALMAGFCRNGHG 398
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+KLF M + G FS ++ + A L++E++ +Q+H +K+G P +
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVS-EQIHGFCIKFGTAFNPCIQTA 457
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
LL C MA A ++FD+ P S D TT I G
Sbjct: 458 LLDMCTRCER---------MADAEEMFDQWP-SNLDSSKATTSIIG-------------- 493
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTF-RKMHSMGIQMDEYTYTSLISASFNTGLF 299
GY R+GL ++A F R + + +DE + T +++ G
Sbjct: 494 ----------------GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G Q+H Y L+ +S+ N+LI+ Y KC A ++F+ M D++SWN++
Sbjct: 538 EMGYQIHCYALKAGYFSD----ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSL 593
Query: 360 LSGYINARRLEEAKFIFREVPER----NLLTWTVMISGL--AESGFGEESLKLFNQMK 411
+S YI R +EA ++ + E+ +++T T++IS ES LF MK
Sbjct: 594 ISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMK 651
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 49/309 (15%)
Query: 105 ISYNAMVKAYSH-NLDGHAAVKLFVRMKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQL 162
+SY A++ +S NL+ A +K+F RM++ G P+ ++F +L A ++ Q +
Sbjct: 146 VSYTALISGFSRLNLEIEA-LKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ-I 203
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H +VK G + V N+L+S Y + S+ + KLFDE P Q+D SW
Sbjct: 204 HGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDD-------VLKLFDEIP--QRDVASW-- 252
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQM 281
N ++S V+ G +AFD F +M+ + G +
Sbjct: 253 -----------------------------NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV 283
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
D +T ++L+S+ ++ + GR+LH +R + LSVNNALI FY+K + +
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE----LSVNNALIGFYSKFWDMKKV 339
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 401
+++ M +D V++ +++ Y++ ++ A IF V E+N +T+ +++G +G G
Sbjct: 340 ESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGL 399
Query: 402 ESLKLFNQM 410
++LKLF M
Sbjct: 400 KALKLFTDM 408
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 169/391 (43%), Gaps = 61/391 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+L IH I+ +GF + + N L+ +Y K S
Sbjct: 198 SLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG-------------------------- 231
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR-DGFAPDPF 140
S+ +V KLF+ P RD S+N +V + H A LF M R +GF D F
Sbjct: 232 SSCDDVL---KLFDEIPQ--RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSF 286
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ ST+L + + + ++LH ++ G+M SV N L+ Y VES M
Sbjct: 287 TLSTLLSSCT-DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEM 345
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A +D ++T MI Y+ + SA ++ +T + +NA+++G+ R
Sbjct: 346 MMA-----------QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCR 394
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSE 318
+G +A F M G+++ +++ TS + A Q+H + ++ T P
Sbjct: 395 NGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNP-- 452
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA---ILSGYINARRLEEAKFI 375
+ AL+ T+C ++ A E+FD+ P +L S A I+ GY ++A +
Sbjct: 453 ----CIQTALLDMCTRCERMADAEEMFDQWP-SNLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 376 F-REVPERNL----LTWTVMISGLAESGFGE 401
F R + E+ L ++ T++++ GF E
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 13/143 (9%)
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNC 301
++ P V++ A+ISG+ R L EA F +M G +Q +EYT+ ++++A F+
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTK-----CGKLVQAREVFDKMPVRDLVSW 356
G Q+H ++++ S + V+N+L++ Y K C +++ +FD++P RD+ SW
Sbjct: 200 GIQIHGLIVKSGFLNS----VFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASW 252
Query: 357 NAILSGYINARRLEEAKFIFREV 379
N ++S + + +A +F E+
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEM 275
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 54/341 (15%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+L Y+ G + A ++F+ + DT S+N ++ ++N AV +F +M+ GF
Sbjct: 310 SLCDMYARCGFLNSARRVFD--QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGF 367
Query: 136 APDPFSFSTVLGAMSL-IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD S ++L A + +A + Q+H ++KWG + +V N+LL+ Y C+
Sbjct: 368 IPDAISLRSLLCAQTKPMALSQG--MQIHSYIIKWGFLADLTVCNSLLTMYTFCSD---- 421
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ LF++ + N D +V+WN +
Sbjct: 422 -----LYCCFNLFED-----------------FRNNAD---------------SVSWNTI 444
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
++ ++H E F+ M + D T +L+ G Q+H Y L+T +
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL 504
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
P E FI N LI Y KCG L QAR +FD M RD+VSW+ ++ GY + EEA
Sbjct: 505 AP-EQFI---KNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 375 IFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F+E+ E N +T+ +++ + G EE LKL+ M+
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 146/320 (45%), Gaps = 50/320 (15%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ + D +LS Y G+++ A ++F+ P R+ +SY +++ YS N G
Sbjct: 92 HILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE--RNLVSYTSVITGYSQNGQG 149
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A++L+++M ++ PD F+F +++ A + ++ +QLH V+K
Sbjct: 150 AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG-KQLHAQVIK------------ 196
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L S L+A +IA YVR + ++ A ++
Sbjct: 197 ------------LESSSHLIAQ------------------NALIAMYVRFNQMSDASRVF 226
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLF 299
G+ ++W+++I+G+ + G EA ++M S G+ +EY + S + A +
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
+ G Q+H +++ + + +L Y +CG L AR VFD++ D SWN I
Sbjct: 287 DYGSQIHGLCIKSELAGNA----IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVI 342
Query: 360 LSGYINARRLEEAKFIFREV 379
++G N +EA +F ++
Sbjct: 343 IAGLANNGYADEAVSVFSQM 362
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 98/188 (52%), Gaps = 12/188 (6%)
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLAS 235
L T +S C+SS +A RK+ D S + D +++ Y + L
Sbjct: 67 LRTYISLICACSSSRS------LAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
AR++ D M V++ ++I+GY ++G EA + KM + D++ + S+I A +
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
+ G+QLHA V++ ++ S H I NALI Y + ++ A VF +P++DL+S
Sbjct: 181 SSDVGLGKQLHAQVIK--LESSSHLI--AQNALIAMYVRFNQMSDASRVFYGIPMKDLIS 236
Query: 356 WNAILSGY 363
W++I++G+
Sbjct: 237 WSSIIAGF 244
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
S + R L EAFD +K S I++ TY SLI A ++ GR++H ++L + +
Sbjct: 44 SNFYREAL--EAFDFAQKNSSFKIRL--RTYISLICACSSSRSLAQGRKIHDHILNSNCK 99
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ +NN +++ Y KCG L AREVFD MP R+LVS+ ++++GY + EA +
Sbjct: 100 ----YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 376 FREVPERNLL 385
+ ++ + +L+
Sbjct: 156 YLKMLQEDLV 165
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D TM NL + S L +H + L TG I+N LID+Y K ++ A
Sbjct: 472 DHITMGNLLRGCVEISSLK--LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLD 119
+FD N D+ S +TL+ Y+ +G + A LF + + +++ ++ A SH
Sbjct: 530 IFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 120 GHAAVKLFVRMKRD-GFAPDPFSFSTVLGAMSLI-----AEEEWHCQQLHCDVVKWGVM 172
+KL+ M+ + G +P S V+ ++ AE +L DVV W +
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 168/397 (42%), Gaps = 93/397 (23%)
Query: 21 QTLARAIHAHILTTGFRLTPLIRNRLIDIYCKS---SNIPYAHHLFDKTPNPDIFSRTTL 77
Q A AI +HI F +LI+ +S S++ YA HLF+ PDI
Sbjct: 47 QIQAYAIKSHIEDVSFVA------KLINFCTESPTESSMSYARHLFEAMSEPDI------ 94
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ +N+M + YS + LFV + DG P
Sbjct: 95 ---------------------------VIFNSMARGYSRFTNPLEVFSLFVEILEDGILP 127
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D ++F ++L A + +A+ +QLHC +K G+ + Y+C
Sbjct: 128 DNYTFPSLLKACA-VAKALEEGRQLHCLSMKLGLD---------DNVYVC---------- 167
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
T+I Y +D+ SAR + D + P V +NAMI+G
Sbjct: 168 -----------------------PTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
Y R EA FR+M ++ +E T S++S+ G + G+ +H Y + S
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH----S 260
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
+ VN ALI + KCG L A +F+KM +D +W+A++ Y N + E++ +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 378 EVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+ N+ +T+ +++ + +G EE K F+QM
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 187/416 (44%), Gaps = 69/416 (16%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDI------YCKSSNI-PYAHHLF 63
LA L S+ L + IH +L T + +RL+ + + K +N+ YA+ +F
Sbjct: 16 LALLQSCSSFSDL-KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAA 123
+ NP++F +N +++ +S + A
Sbjct: 75 SQIQNPNLFV---------------------------------FNLLIRCFSTGAEPSKA 101
Query: 124 VKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLN 179
+ +M + PD +F ++ A S E C +Q H +V++G V N
Sbjct: 102 FGFYTQMLKSRIWPDNITFPFLIKASS-----EMECVLVGEQTHSQIVRFGFQNDVYVEN 156
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
+L+ Y C +A+A ++F + + +D SWT+M+AGY + + +AR++
Sbjct: 157 SLVHMYANCG---------FIAAAGRIFGQ--MGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D M H W+ MI+GY ++ +E+A D F M G+ +E S+IS+ + G
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 265
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G + + YV+++ + + L + AL+ + +CG + +A VF+ +P D +SW++I
Sbjct: 266 EFGERAYEYVVKSHMTVN----LILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSI 321
Query: 360 LSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
+ G +A F ++ + T+T ++S + G E+ L+++ MK
Sbjct: 322 IKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 165/346 (47%), Gaps = 53/346 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ L++AYS G V+LA ++F+ + R +S+N M+ Y+ N A+ +F+
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDG--MLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ +GF F+ S+VL A + + C++LHC VK C+ L+ Y+
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDA-LECKKLHCLSVK---TCID------LNLYV--- 199
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
T ++ Y + + A ++ + M +V
Sbjct: 200 ------------------------------GTALLDLYAKCGMIKDAVQVFESMQDKSSV 229
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W++M++GYV++ YEEA +R+ M ++ +++T +S+I A N G+Q+HA +
Sbjct: 230 TWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI 289
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ + + V ++ + Y KCG L ++ +F ++ ++L WN I+SG+ R
Sbjct: 290 CKSGFGSN----VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 370 EEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+E +F ++ + N +T++ ++S +G EE + F M+
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 52/393 (13%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+LAR +H ++ GF + N +I Y K NI A +FD+ D+ S +++S Y
Sbjct: 149 SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGY 208
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
S +G+ + +K+ Y AM+ +G + +F + S
Sbjct: 209 SQSGSFEDCKKM-------------YKAMLACSDFKPNGVTVISVFQACGQ--------S 247
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+ G ++H +++ + S+ N ++ Y C S +
Sbjct: 248 SDLIFGL------------EVHKKMIENHIQMDLSLCNAVIGFYAKCGS---------LD 286
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
AR LFDE +S+KD ++ +I+GY+ + + A L M WNAMISG +++
Sbjct: 287 YARALFDE--MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQN 344
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+EE ++FR+M G + + T +SL+ + + G+++HA+ +R +
Sbjct: 345 NHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN---- 400
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP- 380
+ V ++I Y K G L+ A+ VFD R L++W AI++ Y + A +F ++
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 381 ---ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + +T T ++S A SG + + +F+ M
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 163/351 (46%), Gaps = 57/351 (16%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
PD F + L+S Y+ + A +F+ +T+R+ SYNA++ AY+ A LF+
Sbjct: 55 PDNFLASKLISFYTRQDRFRQALHVFD--EITVRNAFSYNALLIAYTSREMYFDAFSLFL 112
Query: 129 R------MKRDGFAPDPFSFSTVLGAMSLIAEEEW---HCQQLHCDVVKWGVMCVPSVLN 179
D PD S S VL A+S ++ W +Q+H V++ G V N
Sbjct: 113 SWIGSSCYSSDAARPDSISISCVLKALSG-CDDFWLGSLARQVHGFVIRGGFDSDVFVGN 171
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
+++ Y C + + SARK+FDE +S++D SW +MI+GY ++ +K+
Sbjct: 172 GMITYYTKCDN---------IESARKVFDE--MSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
M S + +G+ T S+ A +
Sbjct: 221 YKAML---------ACSDFKPNGV---------------------TVISVFQACGQSSDL 250
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G ++H ++ +Q LS+ NA+I FY KCG L AR +FD+M +D V++ AI
Sbjct: 251 IFGLEVHKKMIENHIQMD----LSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAI 306
Query: 360 LSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+SGY+ ++EA +F E+ L TW MISGL ++ EE + F +M
Sbjct: 307 ISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM 357
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 166/392 (42%), Gaps = 58/392 (14%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H ++ ++ + N +I Y K ++ YA LFD+ D + ++S Y A G
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGL 315
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
VK A LF+ T +NAM+ N + F M R G P+ + S++L
Sbjct: 316 VKEAMALFSEMESIGLST--WNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+++ + + +++H ++ G V +++ Y + A+++
Sbjct: 374 PSLTYSSNLKGG-KEIHAFAIRNGADNNIYVTTSIIDNYAKLG---------FLLGAQRV 423
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
FD + +WT +I Y + D SA L D
Sbjct: 424 FDNCK--DRSLIAWTAIITAYAVHGDSDSACSLFD------------------------- 456
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQPS-EHFILSV 324
+M +G + D+ T T+++SA ++G + + + +L + ++P EH+
Sbjct: 457 ------QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYA--- 507
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEEAKF----IFREV 379
+++ ++ GKL A E KMP+ + W A+L+G LE A+F +F
Sbjct: 508 --CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEME 565
Query: 380 PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
PE N +T+M + ++G EE+ + N+MK
Sbjct: 566 PE-NTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 146/304 (48%), Gaps = 33/304 (10%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
R+ NA+++ + N ++V+ F+ M R G PD +F VL + S + W +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR-WLGRA 147
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCY-----ICCASSTLVESP------------VL----- 199
LH +K V C V +L+ Y + A ESP VL
Sbjct: 148 LHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 200 ----MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
M A LF P +++ SW+T+I GYV + +L A++L + M V+W +I
Sbjct: 208 RAKDMHMATTLFRSMP--ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLI 265
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G+ + G YE A T+ +M G++ +EYT +++SA +G G ++H Y+L ++
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
++ AL+ Y KCG+L A VF M +D++SW A++ G+ R +A
Sbjct: 326 LDR----AIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 376 FREV 379
FR++
Sbjct: 382 FRQM 385
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 168/357 (47%), Gaps = 26/357 (7%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN- 68
F+ + N + L RA+HA L +R L+D+Y K+ + +A +F+++P+
Sbjct: 131 FVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDR 190
Query: 69 ---PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVK 125
I L++ Y A ++ +A LF + P R++ S++ ++K Y + + + A +
Sbjct: 191 IKKESILIWNVLINGYCRAKDMHMATTLFRSMPE--RNSGSWSTLIKGYVDSGELNRAKQ 248
Query: 126 LFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
LF M + S++T++ S + E + ++++ G+ + +LS
Sbjct: 249 LFELMPE----KNVVSWTTLINGFSQTGDYETAIST-YFEMLEKGLKPNEYTIAAVLSA- 302
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C+ S + S + + + D + D T ++ Y + +L A + M H
Sbjct: 303 --CSKSGALGSGIRIHGY--ILDNGI--KLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ- 304
++W AMI G+ HG + +A FR+M G + DE + ++++A N+ + G
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNF 416
Query: 305 LHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAI 359
+ L ++P+ +H++L V+ + GKL +A E+ + MP+ DL +W A+
Sbjct: 417 FDSMRLDYAIEPTLKHYVLVVD-----LLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 39/194 (20%)
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
NA+I G + +E + F M +G++ D T+ ++ ++ G GR LHA L+
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK------------------------ 347
V LS L+ Y K G+L A +VF++
Sbjct: 155 NFVDCDSFVRLS----LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 348 -----------MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 396
MP R+ SW+ ++ GY+++ L AK +F +PE+N+++WT +I+G ++
Sbjct: 211 DMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Query: 397 SGFGEESLKLFNQM 410
+G E ++ + +M
Sbjct: 271 TGDYETAISTYFEM 284
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 195/419 (46%), Gaps = 28/419 (6%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
DS + NLF ++ + + + IH +G + ++ + +Y + + A
Sbjct: 115 DSHVLPNLF--KVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARK 172
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLD 119
+FD+ + D+ + + LL AY+ G ++ ++ + + + +S+N ++ ++ +
Sbjct: 173 VFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
AV +F ++ GF PD + S+VL ++ +E + +H V+K G++ V++
Sbjct: 233 HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG-DSEMLNMGRLIHGYVIKQGLLKDKCVIS 291
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
++ Y S V + LF++ + + I G RN + A ++
Sbjct: 292 AMIDMY---GKSGHVYGII------SLFNQFEMMEAG--VCNAYITGLSRNGLVDKALEM 340
Query: 240 LDGMTHPI----AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
+ V+W ++I+G ++G EA + FR+M G++ + T S++ A N
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
GR H + +R + + H V +ALI Y KCG++ ++ VF+ MP ++LV
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVH----VGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 356 WNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
WN++++G+ + +E IF + L +++T ++S + G +E K F M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 176/394 (44%), Gaps = 61/394 (15%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNV 87
HA IL +G + I +LI Y + A + P+P I+S ++L+ A + A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA--- 94
Query: 88 KLAEKLFNATPVTLRDTISYNAMVKAYSHNL--DGHAAVKLFVRMKRDGFAPDPFSFSTV 145
KLF T S + +SH L D H P+ F
Sbjct: 95 ----KLF---------TQSIGVFSRMFSHGLIPDSHVL-------------PNLFKVCAE 128
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
L A + +Q+HC G+ V ++ Y+ C M ARK
Sbjct: 129 LSAFKV-------GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR---------MGDARK 172
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRH 261
+FD +S KD + + ++ Y R L ++L M V+WN ++SG+ R
Sbjct: 173 VFDR--MSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G ++EA F+K+H +G D+ T +S++ + ++ + N GR +H YV++ + + I
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI 290
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----R 377
+A+I Y K G + +F++ + + NA ++G +++A +F
Sbjct: 291 ----SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE 346
Query: 378 EVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ E N+++WT +I+G A++G E+L+LF +M+
Sbjct: 347 QTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 157/340 (46%), Gaps = 57/340 (16%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ YS ++ A K+F+++ R++I+++AMV YS N + AVKLF RM G
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGD--RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
P ++ VL A S I E +QLH ++K G
Sbjct: 320 PSEYTIVGVLNACSDICYLE-EGKQLHSFLLKLGF------------------------- 353
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
R LF + T ++ Y + LA ARK D + W ++IS
Sbjct: 354 ------ERHLF-----------ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
GYV++ EEA +R+M + GI ++ T S++ A + G+Q+H + ++
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK----- 451
Query: 317 SEHFILSV--NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
F L V +AL T Y+KCG L VF + P +D+VSWNA++SG + + +EA
Sbjct: 452 -HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALE 510
Query: 375 IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+F E+ + +T+ +IS + GF E FN M
Sbjct: 511 LFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 166/384 (43%), Gaps = 80/384 (20%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
++ T+A +F A+ + S+T + R HA ++ + L+ +YCK+ +
Sbjct: 117 NAYTLAGIFKAESSLQSST--VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+F P + ++ +T++S Y+ G V+ A K+FN
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN-------------------------- 208
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
LF+R K +G D + F+ VL +++ +Q+HC +K G++ ++ N L
Sbjct: 209 ----LFLREKEEGSDSD-YVFTAVLSSLAATIYVGLG-RQIHCITIKNGLLGFVALSNAL 262
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
++ Y C S + A K+FD + ++ +W+ M+ GY +N + A KL
Sbjct: 263 VTMYSKCES---------LNEACKMFDSS--GDRNSITWSAMVTGYSQNGESLEAVKL-- 309
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
F +M S GI+ EYT +++A +
Sbjct: 310 -----------------------------FSRMFSAGIKPSEYTIVGVLNACSDICYLEE 340
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+QLH+++L+ + L AL+ Y K G L AR+ FD + RD+ W +++S
Sbjct: 341 GKQLHSFLLKLGFERH----LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 362 GYINARRLEEAKFIFREVPERNLL 385
GY+ EEA ++R + ++
Sbjct: 397 GYVQNSDNEEALILYRRMKTAGII 420
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 151/377 (40%), Gaps = 90/377 (23%)
Query: 10 FLAQLNHPSATQTL--ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
L +L H S + L RA+H I+ TG N L++ Y K + AH
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH------- 69
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHN---LDGHAAV 124
+FNA + +D +S+N+++ YS N + +
Sbjct: 70 ------------------------SIFNA--IICKDVVSWNSLITGYSQNGGISSSYTVM 103
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
+LF M+ P+ ++ + + A S + + +Q H VVK
Sbjct: 104 QLFREMRAQDILPNAYTLAGIFKAESSL-QSSTVGRQAHALVVK---------------- 146
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
M+S ++ + T+++ Y + + K+ M
Sbjct: 147 ---------------MSSFGDIYVD-----------TSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 245 HPIAVAWNAMISGYVRHGLYEEA---FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
W+ M+SGY G EEA F+ F + G D Y +T+++S+ T
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGL 239
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
GRQ+H ++ + ++++NAL+T Y+KC L +A ++FD R+ ++W+A+++
Sbjct: 240 GRQIHCITIKNGLLG----FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 362 GYI-NARRLEEAKFIFR 377
GY N LE K R
Sbjct: 296 GYSQNGESLEAVKLFSR 312
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT---FRKMHSMGIQMDE 283
Y + LA A + + + V+WN++I+GY ++G ++ FR+M + I +
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
YT + A + GRQ HA V V+ S + V+ +L+ Y K G + +
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALV----VKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIF------REVPERNLLTWTVMISGLAES 397
VF MP R+ +W+ ++SGY R+EEA +F +E + +T ++S LA +
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 398 ---GFGEE 402
G G +
Sbjct: 235 IYVGLGRQ 242
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 53/303 (17%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F+ T L+ Y+ AG + A K F+ + RD + +++ Y N D A+ L+ RM
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDC--LQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
K G P+ + ++VL A S +A E +Q+H +K G + + L + Y C S
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELG-KQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ +F P KD SW MI+G N
Sbjct: 474 ---------LEDGNLVFRRTP--NKDVVSWNAMISGLSHN-------------------- 502
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
G +EA + F +M + G++ D+ T+ ++ISA + G G +
Sbjct: 503 -----------GQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 311 RTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINAR 367
+ + P +H+ ++ ++ G+L +A+E + + L W +LS N
Sbjct: 552 DQIGLDPKVDHYA-----CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 368 RLE 370
+ E
Sbjct: 607 KCE 609
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
GR +H ++RT + N L+ FY KCGKL +A +F+ + +D+VSWN++++
Sbjct: 33 GRAVHGQIIRTGAST----CIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 362 GYINARRLEEAKFI---FREVPERNLLTWTVMISGL--AES 397
GY + + + FRE+ +++L ++G+ AES
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 149/361 (41%), Gaps = 86/361 (23%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T + +H + GF + N ++++YCK ++ A LFD+
Sbjct: 161 TQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ------------- 207
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
RD +S+N M+ Y+ + +KL RM+ DG PD +
Sbjct: 208 --------------------RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F L + + E + LHC +VK G + L++ Y+ C
Sbjct: 248 FGASLSVSGTMCDLEMG-RMLHCQIVKTGFDVDMHLKTALITMYLKCG------------ 294
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
K+E S+ ++L+ + + V W MISG +R
Sbjct: 295 -------------KEEASY-----------------RVLETIPNKDVVCWTVMISGLMRL 324
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR---TVVQPSE 318
G E+A F +M G + S++++ G F+ G +H YVLR T+ P+
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
N+LIT Y KCG L ++ +F++M RDLVSWNAI+SGY L +A +F E
Sbjct: 385 -------NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEE 437
Query: 379 V 379
+
Sbjct: 438 M 438
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 52/314 (16%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D + ++L++ Y+ G + A K+F + RD + + AM+ YS A L
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFE--EMRERDVVHWTAMIGCYSRAGIVGEACSLV 135
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M+ G P P + +L + I + Q LH V +G C +V+N++L+ Y
Sbjct: 136 NEMRFQGIKPGPVTLLEMLSGVLEITQ----LQCLHDFAVIYGFDCDIAVMNSMLNLYCK 191
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + A+ LFD+ + Q+D SW TMI+GY +++ KLL
Sbjct: 192 CDH---------VGDAKDLFDQ--MEQRDMVSWNTMISGYASVGNMSEILKLL------- 233
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+M G++ D+ T+ + +S S GR LH
Sbjct: 234 ------------------------YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+++T H + ALIT Y KCGK + V + +P +D+V W ++SG +
Sbjct: 270 QIVKTGFDVDMH----LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 368 RLEEAKFIFREVPE 381
R E+A +F E+ +
Sbjct: 326 RAEKALIVFSEMLQ 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
+N+ I+ HG +++ TF M + + D +T+ SL+ A + + G +H VL
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
V S F +S ++L+ Y K G L AR+VF++M RD+V W A++ Y A +
Sbjct: 74 --VNGFSSDFYIS--SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 371 EAKFIFREVPERNL----LTWTVMISGLAE 396
EA + E+ + + +T M+SG+ E
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 50/257 (19%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L ++H ++L G+ L N LI +Y K ++ + +F++
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE-------------- 409
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP-DPFS 141
RD +S+NA++ Y+ N+D A+ LF MK D F+
Sbjct: 410 -------------------RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
++L A S + +HC V++ + V L+ Y C +
Sbjct: 451 VVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCG---------YLE 500
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISG 257
+A++ FD +S KD SW +IAGY + A ++ H P V + A++S
Sbjct: 501 AAQRCFD--SISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSS 558
Query: 258 YVRHGLYEEAFDTFRKM 274
+G+ ++ F M
Sbjct: 559 CSHNGMVQQGLKIFSSM 575
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 63/392 (16%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH + TG ++N LI +Y K + + +FD+ P D S +++ Y G
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG-HAAVKLFVRMKRDGFAPDPFSFSTV 145
+ A +LF+ P+ +++ IS+N+M+ Y+ DG A KLF M P+
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM------PEK------ 250
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
D++ W N+++ Y+ + A+
Sbjct: 251 -------------------DLISW---------NSMIDGYVKHGR---------IEDAKG 273
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE 265
LFD P ++D +W TMI GY + + A+ L D M H VA+N+M++GYV++ +
Sbjct: 274 LFDVMP--RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHM 331
Query: 266 EAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
EA + F M + D+ T ++ A G + +H Y +V+ + +
Sbjct: 332 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY----IVEKQFYLGGKL 387
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-- 382
ALI Y+KCG + A VF+ + + + WNA++ G + L E+ F ER
Sbjct: 388 GVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG-LAIHGLGESAFDMLLQIERLS 446
Query: 383 ---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ +T+ +++ + SG +E L F M+
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEGLLCFELMR 478
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 72/326 (22%)
Query: 101 LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ 160
+ D +NA++K++SH D A+ L M +G + D FS S VL A S + +
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVK-GGM 141
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCAS-------------------STLVESPV--- 198
Q+H + K G+ + N L+ Y+ C +++++ V
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVR-NDDLASARKLLDGMTHPIAVAWNAMISG 257
L+ SAR+LFD P+ K+ SW +MI+GY + +D + A KL M ++WN+MI G
Sbjct: 202 LIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDG 261
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
YV+HG E+A F M + D T+ ++I
Sbjct: 262 YVKHGRIEDAKGLFDVMP----RRDVVTWATMIDG------------------------- 292
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
Y K G + A+ +FD+MP RD+V++N++++GY+ + EA IF
Sbjct: 293 --------------YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFS 338
Query: 378 EVPERNLL-----TWTVMISGLAESG 398
++ + + L T +++ +A+ G
Sbjct: 339 DMEKESHLLPDDTTLVIVLPAIAQLG 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WNA+I + +A M G+ +D+++ + ++ A G G Q+H ++
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+T + L + N LI Y KCG L +R++FD+MP RD VS+N+++ GY+ +
Sbjct: 149 KTGLWSD----LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 371 EAKFIFREVP--ERNLLTWTVMISGLAESGFGEE-SLKLFNQM 410
A+ +F +P +NL++W MISG A++ G + + KLF M
Sbjct: 205 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM 247
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 143/340 (42%), Gaps = 54/340 (15%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +ID Y K I A LFD P D+ + T++ Y+ G V A+ LF+ P RD
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP--HRD 313
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
++YN+M+ Y N A+++F M+++ PD + VL A++ +
Sbjct: 314 VVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGR-------- 365
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
L+ + ++ +VE + +
Sbjct: 366 ---------------LSKAIDMHL-----YIVEKQFYLGGKLGV---------------A 390
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I Y + + A + +G+ + WNAMI G HGL E AFD ++ + ++ D
Sbjct: 391 LIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPD 450
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKLVQ 340
+ T+ +++A ++GL G + R ++P +H+ ++ ++ G +
Sbjct: 451 DITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHY-----GCMVDILSRSGSIEL 505
Query: 341 AREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREV 379
A+ + ++MPV + V W L+ + + E + + + +
Sbjct: 506 AKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 168/392 (42%), Gaps = 88/392 (22%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ ++ +++ GF + NR++ ++ K I A LFD+ P +++S +++S +
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 85 GNVKLAEKLFNATPVTLRD--TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
GN A +LF L D T ++ M++A
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRA----------------------------- 233
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S LG++ + +QLH +K GV V NT +SC
Sbjct: 234 SAGLGSIYV-------GKQLHVCALKLGV-----VDNTFVSC------------------ 263
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
+I Y + D+ AR + M VAWN +I+GY HG
Sbjct: 264 -------------------GLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EEA M G+ +D++T + +I S +Q HA ++R + +
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE----I 360
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
N AL+ FY+K G++ AR VFDK+P ++++SWNA++ GY N R +A +F ++
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 383 NL----LTWTVMISGLAESGFGEESLKLFNQM 410
N+ +T+ ++S A SG E+ ++F M
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 264 YEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+ EAF+ F + ++ TY +L+ A C ++++ +++ +P ++ +
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM- 161
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA----KFIFRE 378
N ++ + KCG ++ AR +FD++P R+L S+ +I+SG++N EA K ++ E
Sbjct: 162 ---NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 379 VPERNLLTWTVMISGLAESGFG 400
+ + T+ VM+ A +G G
Sbjct: 219 LSDCETHTFAVMLR--ASAGLG 238
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 19/236 (8%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+ F L+ YS G+++ A F P + T+++N ++ Y+ + A+ L
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPE--KTTVAWNNVIAGYALHGYSEEALCLLYD 315
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G + D F+ S ++ + +A+ E +Q H +++ G V NT L
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLEL-TKQAHASLIRNGFES-EIVANTALV------ 367
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----TH 245
+ +AR +FD+ P +K+ SW ++ GY + A KL + M
Sbjct: 368 --DFYSKWGRVDTARYVFDKLP--RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFN 300
P V + A++S GL E+ ++ F M + GI+ Y +I GL +
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD 479
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 29/322 (9%)
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL-GAMSLIAEEEWH 158
T T+S+ + + + N A K F M G P+ +F +L G + E
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPL-----S 213
LH K G+ ++ T + + M S R F +A L
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAI---------------IGMYSKRGRFKKARLVFDYME 136
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
K+ +W TMI GY+R+ + +A K+ D M ++W AMI+G+V+ G EEA FR+
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
M G++ D + ++A N G + G +H YVL + + + V+N+LI Y
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN----VRVSNSLIDLYC 252
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTV 389
+CG + AR+VF M R +VSWN+++ G+ E+ FR++ E+ +T+T
Sbjct: 253 RCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 390 MISGLAESGFGEESLKLFNQMK 411
++ + G EE L+ F MK
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMK 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 130/337 (38%), Gaps = 53/337 (15%)
Query: 18 SATQTLARAIHAHILTTGF-RLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
S ++ L +H + G R ++ +I +Y K A +FD + + + T
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
++ Y +G V A K+F+ P RD IS+ AM+ + A+ F M+ G
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPE--RDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD + L A C L + +G+ VL+ + ++S
Sbjct: 204 PDYVAIIAALNA----------CTNL--GALSFGLWVHRYVLSQDFKNNVRVSNS----- 246
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+I Y R + AR++ M V+WN++I
Sbjct: 247 --------------------------LIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIV 280
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQ 315
G+ +G E+ FRKM G + D T+T ++A + GL G R +
Sbjct: 281 GFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRIS 340
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
P EH+ L+ Y++ G+L A ++ MP++
Sbjct: 341 PRIEHY-----GCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 167/393 (42%), Gaps = 122/393 (31%)
Query: 25 RAIHA------HILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
RA+H H+ G R + N LI++Y K + + AH LFD+ P ++ S TT++
Sbjct: 75 RAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMI 134
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
SAYS K+ +K A++L V M RD P+
Sbjct: 135 SAYSKC---KIHQK------------------------------ALELLVLMLRDNVRPN 161
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
+++S+VL + + +++ + LHC ++K G +ES V
Sbjct: 162 VYTYSSVLRSCNGMSD----VRMLHCGIIKEG-----------------------LESDV 194
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
+ SA +I + + + A + D M A+ WN++I G+
Sbjct: 195 FVRSA-------------------LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++ + A + F++M G ++ T TS++ A L G Q H + +V+ +
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH----IVKYDQ 291
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
IL NNAL+ Y KCG L A VF++M RD+++W
Sbjct: 292 DLIL--NNALVDMYCKCGSLEDALRVFNQMKERDVITW---------------------- 327
Query: 379 VPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ MISGLA++G+ +E+LKLF +MK
Sbjct: 328 ---------STMISGLAQNGYSQEALKLFERMK 351
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 63/317 (19%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F R+ L+ ++ G + A +F+ + D I +N+++ ++ N A++LF R
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFD--EMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MKR GF + + ++VL A + +A E Q H +VK+ + + N L+ Y C
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELG-MQAHVHIVKYDQDLILN--NALVDMYCKCG 307
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S + A ++F++ + ++D +W+TMI+G +N
Sbjct: 308 S---------LEDALRVFNQ--MKERDVITWSTMISGLAQN------------------- 337
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
G +EA F +M S G + + T ++ A + GL G Y
Sbjct: 338 ------------GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYY 381
Query: 310 LRTV-----VQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
R++ + P EH+ +I K GKL A ++ ++M D V+W +L
Sbjct: 382 FRSMKKLYGIDPVREHY-----GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 363 YINARRLEEAKFIFREV 379
R + A++ ++V
Sbjct: 437 CRVQRNMVLAEYAAKKV 453
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 53/348 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F + L++ Y+ + A +F P+ R +S+ A+V AY+ N + A+++F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+M++ PD + +VL A + + + + + +H VVK G+ P +L +L + Y
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLK-QGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C +A+A+ LFD+ + + W MI+GY +N
Sbjct: 270 CGQ---------VATAKILFDK--MKSPNLILWNAMISGYAKN----------------- 301
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
GY R EA D F +M + ++ D + TS ISA G R ++
Sbjct: 302 ---------GYAR-----EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
YV R+ + + +++ALI + KCG + AR VFD+ RD+V W+A++ GY
Sbjct: 348 YVGRSDYRDD----VFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 368 RLEEAKFIFREVPER-----NLLTWTVMISGLAESGFGEESLKLFNQM 410
R EA ++R + ER N +T+ ++ SG E FN+M
Sbjct: 404 RAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 88/414 (21%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
+S ++ F A L + + + IHA +L G + + + +LI +I +A
Sbjct: 15 NSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+FD P P IF +NA+++ YS N
Sbjct: 75 VFDDLPRPQIF---------------------------------PWNAIIRGYSRNNHFQ 101
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ---LHCDVVKWGVMCVPSVL 178
A+ ++ M+ +PD F+F +L A S ++ H Q +H V + G V
Sbjct: 102 DALLMYSNMQLARVSPDSFTFPHLLKACSGLS----HLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
N L++ Y C + SAR +F+ PL ++ SWT
Sbjct: 158 NGLIALYAKCRR---------LGSARTVFEGLPLPERTIVSWT----------------- 191
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
A++S Y ++G EA + F +M M ++ D S+++A
Sbjct: 192 --------------AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
GR +HA V++ ++ ++S+N T Y KCG++ A+ +FDKM +L+ WNA
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLN----TMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 359 ILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFN 408
++SGY EA +F E+ +++ ++ T IS A+ G E++ ++
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 50/320 (15%)
Query: 62 LFDKTPNPDI-FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+F P+ ++ F L+ Y G++ AEK+F+ P R ++N M+ AY N +
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPD--RTAFAWNTMIGAYVSNGEP 163
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
+A+ L+ M+ +G SF +L A + + + +LH +VK G ++N
Sbjct: 164 ASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR-SGSELHSLLVKLGYHSTGFIVNA 222
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+S Y +NDDL++AR+L
Sbjct: 223 LVSMY------------------------------------------AKNDDLSAARRLF 240
Query: 241 DGMTHP-IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
DG AV WN+++S Y G E + FR+MH G + YT S ++A
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G+++HA VL++ SE L V NALI YT+CGK+ QA + +M D+V+WN++
Sbjct: 301 KLGKEIHASVLKSSTHSSE---LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 360 LSGYINARRLEEAKFIFREV 379
+ GY+ +EA F ++
Sbjct: 358 IKGYVQNLMYKEALEFFSDM 377
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 78/358 (21%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H+ ++ G+ T I N L+ +Y K+ ++ A LFD + G
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD---------------GFQEKG- 247
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
D + +N+++ +YS + ++LF M G AP+ ++ + L
Sbjct: 248 ----------------DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
A + + +++H V+K S ++ L Y+C A
Sbjct: 292 TACDGFSYAKLG-KEIHASVLK------SSTHSSEL--YVCNA----------------- 325
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
+IA Y R + A ++L M + V WN++I GYV++ +Y+E
Sbjct: 326 ----------------LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A + F M + G + DE + TS+I+AS G +LHAYV++ + L V N
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN----LQVGN 425
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
LI Y+KC F +M +DL+SW +++GY EA +FR+V ++ +
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 139/340 (40%), Gaps = 60/340 (17%)
Query: 50 YCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
Y K +A L T + +++ L++ Y+ G + AE++ + D +++N+
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILR--QMNNADVVTWNS 356
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW 169
++K Y NL A++ F M G D S ++++ A ++ +LH V+K
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL-LAGMELHAYVIKH 415
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
G V NTL+ Y C + + L + KD SWTT+IA
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR-----------MHDKDLISWTTVIA---- 460
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
GY ++ + EA + FR + +++DE S+
Sbjct: 461 ---------------------------GYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 290 ISASFNTGLFNCGRQLHAYVLR-----TVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
+ AS +++H ++LR TV+Q N L+ Y KC + A V
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLLDTVIQ----------NELVDVYGKCRNMGYATRV 543
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
F+ + +D+VSW +++S EA +FR + E L
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 158/383 (41%), Gaps = 63/383 (16%)
Query: 23 LARAIHAHILTTGFRLTPL-IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IHA +L + + L + N LI +Y + +P A + + N D+ + +L+ Y
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 82 SAAGNVKLAEKLFN--------ATPVTLRDTISYNAMVKAYSHNLDGHAAV--------- 124
K A + F+ + V++ I+ + + ++ HA V
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 125 --------------------KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC 164
+ F+RM D S++TV+ A+ + H + L
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHD----KDLISWTTVIAG---YAQNDCHVEALEL 474
Query: 165 --DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
DV K + +L ++L S +V+ + L D ++
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-------- 526
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
++ Y + ++ A ++ + + V+W +MIS +G EA + FR+M G+ D
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL--SVNNALITFYTKCGKLVQ 340
++SA+ + N GR++H Y+LR + F L S+ A++ Y CG L
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLR------KGFCLEGSIAVAVVDMYACCGDLQS 640
Query: 341 AREVFDKMPVRDLVSWNAILSGY 363
A+ VFD++ + L+ + ++++ Y
Sbjct: 641 AKAVFDRIERKGLLQYTSMINAY 663
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y + L A K+ D M A AWN MI YV +G A + M G+ + ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+L+ A G +LH+ +++ S FI+ NAL++ Y K L AR +FD
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIV---NALVSMYAKNDDLSAARRLFD 241
Query: 347 KMPVR-DLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGF 399
+ D V WN+ILS Y + + E +FRE+ P N ++T++ + A GF
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN--SYTIVSALTACDGF 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
GRQLH+ + +T F+ L+ Y KCG L A +VFD+MP R +WN ++
Sbjct: 99 GRQLHSRIFKTFPSFELDFLA---GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIG 155
Query: 362 GYIN 365
Y++
Sbjct: 156 AYVS 159
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 186/377 (49%), Gaps = 60/377 (15%)
Query: 40 PLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
P+ N L ++ K + H +I ++S+Y+ G+V A+++F+
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQH---------EITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
+ +D IS+N+M+ +S + +A +LF++M+R D ++++ +L A S E +
Sbjct: 267 S-KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG-EEHQIFG 324
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+ LH V+K G+ V S N L+S YI + T M A LF+
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGT-------MEDALSLFES---------- 367
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+++ DL ++WN++I+G+ + GL E+A F + S I
Sbjct: 368 --------LKSKDL---------------ISWNSIITGFAQKGLSEDAVKFFSYLRSSEI 404
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
++D+Y +++L+ + + G+Q+HA ++ +E F++S +LI Y+KCG +
Sbjct: 405 KVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE-FVIS---SLIVMYSKCGIIE 460
Query: 340 QAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGL 394
AR+ F ++ + V+WNA++ GY + + +F ++ +N+ +T+T +++
Sbjct: 461 SARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 520
Query: 395 AESGFGEESLKLFNQMK 411
+ +G +E L+L N M+
Sbjct: 521 SHTGLIQEGLELLNLME 537
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 172/387 (44%), Gaps = 51/387 (13%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNV 87
H + + G + NR++D Y K + YA+ LFD+ P D S T++S Y++ G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 88 KLAEKLFNATPVTLRDTISYN--------AMVKAYS-----HNLD-----------GHAA 123
+ A LF + D Y+ A VK + H L G +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 124 VKLFVRMKR--DGFA-------PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCV 174
V ++ + +R D F P+ S++ ++ + + + L +K V
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 175 PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA-PLSQKDEPS-WTTMIAGYVRNDD 232
LL TL++ P+ +++ + L + E + MI+ Y
Sbjct: 203 AGTFAPLL---------TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 233 LASARKLLDGMT-HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
++ A+++ DG+ ++WN+MI+G+ +H L E AF+ F +M ++ D YTYT L+S
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLS 313
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK--CGKLVQAREVFDKMP 349
A G+ LH V++ ++ + S NALI+ Y + G + A +F+ +
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQ----VTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIF 376
+DL+SWN+I++G+ E+A F
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFF 396
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 168/424 (39%), Gaps = 124/424 (29%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
MD+ T A L L L+ P L + +HA +L G + I N +I Y ++ A
Sbjct: 201 MDAGTFAPL-LTLLDDPMFCNLL-KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 61 HLFDKTPNP------------------------------------DIFSRTTLLSAYSAA 84
+FD DI++ T LLSA S
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 85 ----------GNV--KLAEKLFNATPVTL-----------------------RDTISYNA 109
G V K E++ +AT + +D IS+N+
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW 169
++ ++ AVK F ++ D ++FS +L + S +A + QQ+H K
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKS 437
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
G + V+++L+ Y C ++ SARK F + +S K
Sbjct: 438 GFVSNEFVISSLIVMYSKCG---------IIESARKCFQQ--ISSKHS------------ 474
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
VAWNAMI GY +HGL + + D F +M + +++D T+T++
Sbjct: 475 ------------------TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Query: 290 ISASFNTGLFNCGRQLHAYVLRTV--VQPS-EHFILSVNNALITFYTKCGKLVQAREVFD 346
++A +TGL G +L ++ V +QP EH+ +V+ + G + +A+E+ +
Sbjct: 517 LTACSHTGLIQEGLEL-LNLMEPVYKIQPRMEHYAAAVD-----LLGRAGLVNKAKELIE 570
Query: 347 KMPV 350
MP+
Sbjct: 571 SMPL 574
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 185/391 (47%), Gaps = 46/391 (11%)
Query: 54 SNIPYAHHLFDKTP-NPDIFSRTTLLSAYSAAG----NVKLAEKLFN--ATPVTLRDTIS 106
+ I AH KT D FS + L+ A++A V A + N +P + +
Sbjct: 53 TEIQQAHAFMLKTGLFHDTFSASKLV-AFAATNPEPKTVSYAHSILNRIGSP----NGFT 107
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
+N++++AY+++ A+ +F M PD +SF+ VL A + E +Q+H
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE-EGRQIHGLF 166
Query: 167 VKWGVMCVPSVLNTLL-----SCYICCASSTLVESPV-----------------LMASAR 204
+K G++ V NTL+ S Y A L PV L+ AR
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
LFDE + +++ SW MI+GY + A+++ D M V+WNAM++ Y G Y
Sbjct: 227 ALFDE--MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCY 284
Query: 265 EEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
E + F KM + D +T S++SA + G + G +H Y+ + ++ E F+ +
Sbjct: 285 NEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI-EGFLAT 343
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP--- 380
AL+ Y+KCGK+ +A EVF RD+ +WN+I+S ++A IF E+
Sbjct: 344 ---ALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 381 -ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ N +T+ ++S G +++ KLF M
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 169/399 (42%), Gaps = 91/399 (22%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY-- 81
R IH + +G + N L+++Y +S A + D+ P D S +LLSAY
Sbjct: 159 GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 82 -----------------------------SAAGNVKLAEKLFNATPVTLRDTISYNAMVK 112
+AAG VK A+++F++ PV RD +S+NAMV
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPV--RDVVSWNAMVT 276
Query: 113 AYSHNLDGHAAVKLFVRMKRDGF-APDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVK 168
AY+H + +++F +M D PD F+ +VL A + +++ EW +H + K
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW----VHVYIDK 332
Query: 169 WGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 228
G+ + L+ Y C + A ++F S++D +
Sbjct: 333 HGIEIEGFLATALVDMYSKCGK---------IDKALEVF--RATSKRDVST--------- 372
Query: 229 RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 288
WN++IS HGL ++A + F +M G + + T+
Sbjct: 373 ----------------------WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIG 410
Query: 289 LISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFD 346
++SA + G+ + R+L + V+P+ EH+ ++ + GK+ +A E+ +
Sbjct: 411 VLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY-----GCMVDLLGRMGKIEEAEELVN 465
Query: 347 KMPVRDL-VSWNAILSGYINARRLEEAKFIFREVPERNL 384
++P + + ++L +LE+A+ I + E NL
Sbjct: 466 EIPADEASILLESLLGACKRFGQLEQAERIANRLLELNL 504
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 188/404 (46%), Gaps = 87/404 (21%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H + + +G + N L+ +Y + N+ FD+ PD++S TTLLSA G+
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 87 VKLAEKLFNATPVTLRDTIS-YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
++ A ++F+ P RD ++ +NAM+ + +V+LF M + G D F F+T+
Sbjct: 139 IEYAFEVFDKMPE--RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
L +M ++ +Q+H V+K G SV+N L++ Y C ++ A
Sbjct: 197 L-SMCDYGSLDFG-KQVHSLVIKAGFFIASSVVNALITMYFNCQ---------VVVDACL 245
Query: 206 LFDEAPLSQKDEPSWTTMI---AGYVRNDDLASARKLLDGMTHPIAVAWNAMIS------ 256
+F+E ++ +D+ ++ +I AG+ R++ L RK+L+ P + + +++
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA 305
Query: 257 -GYVRHGL-----YEE-------------------------------------------- 266
G+ HGL YE+
Sbjct: 306 MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYN 365
Query: 267 -------AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
A +++MH +G++ DE+T+ SL++ S + + + A +++ +
Sbjct: 366 QAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSK-- 420
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+ ++NALI+ Y+K G++ +A +F++ ++L+SWNAI+SG+
Sbjct: 421 --IEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGF 462
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 123 AVKLFVRMKR-DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+KLF + R PD +S S + + + + Q+HC ++ G++C V NTL
Sbjct: 40 ALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG-GQVHCYAIRSGLLCHSHVSNTL 98
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
LS Y E +AS +K FDE + + D SWTT+++ + D+ A ++ D
Sbjct: 99 LSLY---------ERLGNLASLKKKFDE--IDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 242 GMTHPIAVA-WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
M VA WNAMI+G G +E + + FR+MH +G++ D++ + +++S + G +
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLD 206
Query: 301 CGRQLHAYVLRTVVQPSEHFIL-SVNNALITFYTKCGKLVQAREVFDK--MPVRDLVSWN 357
G+Q+H+ V++ + FI SV NALIT Y C +V A VF++ + VRD V++N
Sbjct: 207 FGKQVHSLVIK-----AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 358 AILSGYINARRLEEAKFIFREVPERNL 384
++ G +R +E+ +FR++ E +L
Sbjct: 262 VVIDGLAGFKR-DESLLVFRKMLEASL 287
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 59/340 (17%)
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
++ YS+ + A K+F + + +D +++N M+ +Y+ G +A+ ++ RM G P
Sbjct: 330 MTMYSSFEDFGAAHKVFES--LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKP 387
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D F+F ++L L DV++ C+
Sbjct: 388 DEFTFGSLLAT------------SLDLDVLEMVQACIIKF-------------------- 415
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
LS K E S +I+ Y +N + A L + ++WNA+ISG
Sbjct: 416 -------------GLSSKIEIS-NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQM--DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+ +G E + F + +++ D YT ++L+S +T G Q HAYVLR Q
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG-Q 520
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
E I NALI Y++CG + + EVF++M +D+VSWN+++S Y E A
Sbjct: 521 FKETLI---GNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 376 FREVPERNLL-----TWTVMISGLAESGFGEESLKLFNQM 410
++ + + + T++ ++S + +G EE L++FN M
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM 617
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 252 NAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
N ++G R G A F +H ++ D+Y+ + I+ + + G Q+H Y +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
R+ + H V+N L++ Y + G L ++ FD++ D+ SW +LS +E
Sbjct: 85 RSGLLCHSH----VSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 371 EAKFIFREVPERN-LLTWTVMISGLAESGFGEESLKLFNQM 410
A +F ++PER+ + W MI+G ESG+ E S++LF +M
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 47/346 (13%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P + L Y+++G + A+KLF+ P++ +D + + ++ ++S ++KLFV
Sbjct: 41 PRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFV 100
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M+R D S + G + + E+ QQ H VK GV+ V N L+ Y C
Sbjct: 101 EMRRKRVEIDDVSVVCLFGVCAKL-EDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
L++ +++F+E L +K SWT ++ V+ + L R++ M A
Sbjct: 160 G---------LVSEVKRIFEE--LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNA 208
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
VAW M++GY+ G E + +M G ++ T S++SA +G GR +H
Sbjct: 209 VAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHV 268
Query: 308 YVLRTVVQPSE---HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
Y L+ + E + + V AL+ Y KCG +
Sbjct: 269 YALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI-------------------------- 302
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + +FR + +RN++TW + SGLA G G + +F QM
Sbjct: 303 -----DSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 172/354 (48%), Gaps = 30/354 (8%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N D + + Y ++ A KLF+ P RD +++N +V + + AV+LF
Sbjct: 20 NSDTRVVSASMGFYGRCVSLGFANKLFDEMPK--RDDLAWNEIVMVNLRSGNWEKAVELF 77
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ--QLHCDVVKWGVMCVPSVLNTLLSCY 185
M+ F+ ST++ + + + +E + Q+H V++ G+ S+ N+L+ Y
Sbjct: 78 REMQ---FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY 134
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT- 244
L +RK+F+ + ++ SW ++++ Y + + A LLD M
Sbjct: 135 SRNGKLEL---------SRKVFN--SMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 245 ---HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
P V WN+++SGY GL ++A ++M G++ + +SL+ A G
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ +H Y+LR + + + V LI Y K G L AR VFD M +++V+WN+++S
Sbjct: 244 GKAIHGYILRNQLW----YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 362 GYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
G A L++A+ + +E + + +TW + SG A G E++L + +MK
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 164/370 (44%), Gaps = 34/370 (9%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L +AIH +IL + LID+Y K+ +PYA +FD +I + +L+S S
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 83 AAGNVKLAEKLF------NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
A +K AE L P D I++N++ Y+ A+ + +MK G A
Sbjct: 303 YACLLKDAEALMIRMEKEGIKP----DAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA---SSTL 193
P+ S++ + S + ++ + + GV + ++TLL C + S
Sbjct: 359 PNVVSWTAIFSGCSKNGNFR-NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
V L + L +A ++ T ++ Y ++ DL SA ++ G+ + +WN
Sbjct: 418 VHGFCL---RKNLICDAYVA-------TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNC 467
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT- 312
M+ GY G EE F M G++ D T+TS++S N+GL G + + ++R+
Sbjct: 468 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMRSR 526
Query: 313 --VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRL 369
++ EH + ++ + G L +A + M ++ D W A LS R L
Sbjct: 527 YGIIPTIEHC-----SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDL 581
Query: 370 EEAKFIFREV 379
E A+ ++ +
Sbjct: 582 ELAEIAWKRL 591
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 97/399 (24%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ L+SA S LA ++FN V + N++++A++ N + A +F
Sbjct: 50 DLHIAPKLISALSLCRQTNLAVRVFNQ--VQEPNVHLCNSLIRAHAQNSQPYQAFFVFSE 107
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWH--CQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M+R G D F++ +L A S + W + +H + K G+ V N L+ CY
Sbjct: 108 MQRFGLFADNFTYPFLLKACS---GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSR 164
Query: 188 CASSTLVESPVL------------------------MASARKLFDEAP------------ 211
C + ++ L + AR+LFDE P
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLD 224
Query: 212 -----------------LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI--AVAWN 252
+ +++ SW+TM+ GY + D+ AR + D M P V W
Sbjct: 225 GYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
+I+GY GL +EA +M + G++ D S+++A +GL + G ++H+ + R+
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
+ + + + NAL+ Y KCG L +A FD
Sbjct: 345 NLGSNAYVL----NALLDMYAKCGNLKKA---FD-------------------------- 371
Query: 373 KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F ++P+++L++W M+ GL G G+E+++LF++M+
Sbjct: 372 --VFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 161/395 (40%), Gaps = 92/395 (23%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIY--CKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
+ + +H HI G + N LID Y C + A LF+K D S ++L
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
AG ++ A +LF+ P RD IS+N M+ Y+ + A +LF +M +
Sbjct: 195 LVKAGELRDARRLFDEMPQ--RDLISWNTMLDGYARCREMSKAFELFEKMPER----NTV 248
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
S+ST++ S + M
Sbjct: 249 SWSTMVMGYSKAGD---------------------------------------------M 263
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
AR +FD+ PL K+ +WT +IAGY L A +L+D M
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV---------------- 307
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+ G++ D S+++A +GL + G ++H+ + R+ + + +
Sbjct: 308 ---------------ASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF---- 376
+ NAL+ Y KCG L +A +VF+ +P +DLVSWN +L G +EA +F
Sbjct: 353 L----NALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 377 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
RE + +T+ ++ +G +E + F M+
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 141/328 (42%), Gaps = 65/328 (19%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N ++D Y + + A LF+K P + S +T++ YS AG++++A +F+ P+ ++
Sbjct: 220 NTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL------GAMSLIAEEEW 157
+++ ++ Y+ A +L +M G D + ++L G +SL
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL------ 333
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
++H + + + VLN LL Y C + + A +F++ P +KD
Sbjct: 334 -GMRIHSILKRSNLGSNAYVLNALLDMYAKCGN---------LKKAFDVFNDIP--KKD- 380
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
V+WN M+ G HG +EA + F +M
Sbjct: 381 ------------------------------LVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV---VQPSEHFILSVNNALITFYTK 334
GI+ D+ T+ +++ + + GL + G + Y + V V EH+ L+ +
Sbjct: 411 GIRPDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHY-----GCLVDLLGR 464
Query: 335 CGKLVQAREVFDKMPVR-DLVSWNAILS 361
G+L +A +V MP+ ++V W A+L
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLG 492
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 52/354 (14%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPD 70
L +L H T+T IHAH+L + L+ I I SN YA+ +F NP+
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN 66
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+ + +NAM+K YS ++ F M
Sbjct: 67 V---------------------------------LVFNAMIKCYSLVGPPLESLSFFSSM 93
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
K G D ++++ +L + S +++ + + +H ++++ G + + ++ Y
Sbjct: 94 KSRGIWADEYTYAPLLKSCSSLSDLRFG-KCVHGELIRTGFHRLGKIRIGVVELYT---- 148
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
S M A+K+FDE +S+++ W MI G+ + D+ L M+ V+
Sbjct: 149 -----SGGRMGDAQKVFDE--MSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN+MIS + G EA + F +M G DE T +++ S + G+ + G+ +H
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH---- 257
Query: 311 RTVVQPSEHF--ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+ + S F ++V NAL+ FY K G L A +F KM R++VSWN ++SG
Sbjct: 258 -STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISG 310
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 103/187 (55%), Gaps = 6/187 (3%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
I G + N D A+ ++ + +P + +NAMI Y G E+ F M S GI DE
Sbjct: 45 ICGSLSNSDYAN--RVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADE 102
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
YTY L+ + + G+ +H ++RT H + + ++ YT G++ A++
Sbjct: 103 YTYAPLLKSCSSLSDLRFGKCVHGELIRTGF----HRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 403
VFD+M R++V WN ++ G+ ++ +E +F+++ ER++++W MIS L++ G E+
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 404 LKLFNQM 410
L+LF +M
Sbjct: 219 LELFCEM 225
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 140/343 (40%), Gaps = 53/343 (15%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ +H ++ TGF IR ++++Y + A +FD+ ++ ++ +
Sbjct: 120 FGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFC 179
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+G+V+ LF ++ R +S+N+M+ + S A++LF M GF PD +
Sbjct: 180 DSGDVERGLHLFK--QMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
TVL + + VL+T + SS L + + + +
Sbjct: 238 VTVLPISASLG-----------------------VLDTGKWIHSTAESSGLFKDFITVGN 274
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A ++ Y ++ DL +A + M V+WN +ISG +G
Sbjct: 275 A-------------------LVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNG 315
Query: 263 LYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEH 319
E D F M G + +E T+ +++ TG G +L ++ + +EH
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ A++ ++ G++ +A + MPV + W ++LS
Sbjct: 376 Y-----GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 158/341 (46%), Gaps = 52/341 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+I+ ++L+S YS ++ A K+F A + ++ + +NAM++ Y+HN + H ++LF+
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEA--LEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK G+ D F+F+++L + + E Q H ++K + V N L+ Y C
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ L AR++ + M V
Sbjct: 478 A------------------------------------------LEDARQIFERMCDRDNV 495
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT-GLFNCGRQLHAY 308
WN +I YV+ EAFD F++M+ GI D S + A + GL+ G+Q+H
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ-GKQVHCL 554
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
++ + H ++LI Y+KCG + AR+VF +P +VS NA+++GY +
Sbjct: 555 SVKCGLDRDLH----TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNN 609
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
LEEA +F+E+ R + + + + E+ ESL L Q
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 160/387 (41%), Gaps = 74/387 (19%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
R IH ++ G L+D+Y K I A +F+ +P+ T L S Y
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYV 237
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
AG L E+ AV +F RM+ +G PD +F
Sbjct: 238 KAG---LPEE------------------------------AVLVFERMRDEGHRPDHLAF 264
Query: 143 STVL----------------GAMSLIAEEEWHCQ-----QLHCDVV---------KWGVM 172
TV+ G MS W+ + C+ V K V
Sbjct: 265 VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
S L ++LS A+ L V+ A A KL + + +++++ Y + +
Sbjct: 325 STRSTLGSVLSAIGIVANLDL--GLVVHAEAIKLGLASNIYVG-----SSLVSMYSKCEK 377
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+ +A K+ + + V WNAMI GY +G + + F M S G +D++T+TSL+S
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
+ G Q H+ +++ + + L V NAL+ Y KCG L AR++F++M RD
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKN----LFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 353 LVSWNAILSGYINARRLEEAKFIFREV 379
V+WN I+ Y+ EA +F+ +
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 171/396 (43%), Gaps = 66/396 (16%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP---------N 68
S + L R I+ H+L + I RL++I + + +FD+ P
Sbjct: 24 SYSPDLGRRIYGHVLPS----HDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIG 79
Query: 69 PDIFSRTTLLSA-------------YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYS 115
+ S++ +L Y+ V AEK F+ +D ++N+M+ YS
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE---KDVTAWNSMLSMYS 136
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV---- 171
++ FV + + P+ F+FS VL + E+ +Q+HC ++K G+
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG-RQIHCSMIKMGLERNS 195
Query: 172 MCVPSVLNTLLSC--------------------YICCAS----STLVESPVLMASARKLF 207
C ++++ C + C S + L E VL+ ++
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF--ERMR 253
Query: 208 DEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEA 267
DE + D ++ T+I Y+R L AR L M+ P VAWN MISG+ + G A
Sbjct: 254 DEG--HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
+ F M ++ T S++SA + G +HA ++ + + + V ++
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN----IYVGSS 367
Query: 328 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
L++ Y+KC K+ A +VF+ + ++ V WNA++ GY
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 152/349 (43%), Gaps = 55/349 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+ + ++L+ YS G +K A K+F++ P +S NA++ YS N + AV LF
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW--SVVSMNALIAGYSQN-NLEEAVVLF 617
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M G P +F+T++ A E Q H + K G
Sbjct: 618 QEMLTRGVNPSEITFATIVEACHK-PESLTLGTQFHGQITKRG----------------- 659
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
S + E +++ Y+ + + A L ++ P
Sbjct: 660 ------------------------FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 248 AVA-WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
++ W M+SG+ ++G YEEA +++M G+ D+ T+ +++ GR +H
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH 755
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYIN 365
+ + E +N LI Y KCG + + +VFD+M R ++VSWN++++GY
Sbjct: 756 SLIFHLAHDLDE----LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 366 ARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
E+A IF + + +++ T+ +++ + +G + K+F M
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 94/220 (42%), Gaps = 40/220 (18%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y + ++ A K D + + AWN+M+S Y G + +F + I +++T+
Sbjct: 105 YAKCAQVSYAEKQFDFLEKDV-TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTF 163
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+ ++S GRQ+H +++ ++ + + AL+ Y KC ++ AR VF+
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSY----CGGALVDMYAKCDRISDARRVFE 219
Query: 347 KMPVRDLVSWNAILSGYINAR-----------------------------------RLEE 371
+ + V W + SGY+ A +L++
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
A+ +F E+ +++ W VMISG + G +++ F M+
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 154/331 (46%), Gaps = 56/331 (16%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D++ T L+ Y GN+ A +F+A P + T+++ M+ + +++LF
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPE--KSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++ D PD + STVL A S++ E +Q+H ++++G+ S++N L
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLE-GGKQIHAHILRYGLEMDASLMNVL------ 290
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
I YV+ + +A KL +GM +
Sbjct: 291 ------------------------------------IDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
++W ++SGY ++ L++EA + F M G++ D Y +S++++ + G Q+HA
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI--- 364
Y ++ + + V N+LI Y KC L AR+VFD D+V +NA++ GY
Sbjct: 375 YTIKANLGNDSY----VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLG 430
Query: 365 NARRLEEAKFIFREVPER----NLLTWTVMI 391
L EA IFR++ R +LLT+ ++
Sbjct: 431 TQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 52/314 (16%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+F N DIF+ + L+ YS +K + +F+ V +D + +N+M Y +
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV--KDLVIWNSMFAGYVQQSENE 537
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+ LF+ ++ PD F+F+ ++ A +A + Q+ HC ++K G+ C P + N L
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNAL 596
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
L Y C S A K FD A + +D
Sbjct: 597 LDMYAKCGSPE---------DAHKAFDSA--ASRD------------------------- 620
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
V WN++IS Y HG ++A KM S GI+ + T+ ++SA + GL
Sbjct: 621 ------VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVED 674
Query: 302 GRQLHAYVLRTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAI 359
G + +LR ++P +EH++ +++ + G+L +ARE+ +KMP + + W ++
Sbjct: 675 GLKQFELMLRFGIEPETEHYV-----CMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 360 LSGYINARRLEEAK 373
LSG A +E A+
Sbjct: 730 LSGCAKAGNVELAE 743
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 156/389 (40%), Gaps = 90/389 (23%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IHAHIL G + + N LID Y K + AH
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH----------------------- 304
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
KLFN P ++ IS+ ++ Y N A++LF M + G PD ++ S
Sbjct: 305 --------KLFNGMPN--KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++L + + + + Q+H +K + V N+L+ Y C T A
Sbjct: 355 SILTSCASLHALGFG-TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT---------DA 404
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
RK+F D A+A V +NAMI GY R G
Sbjct: 405 RKVF-----------------------DIFAAAD----------VVLFNAMIEGYSRLGT 431
Query: 264 ---YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
EA + FR M I+ T+ SL+ AS + +Q+H + + + +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL----NL 487
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF---- 376
+ +ALI Y+ C L +R VFD+M V+DLV WN++ +GY+ EEA +F
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 377 --REVPERNLLTWTVMISG-LAESGFGEE 402
RE P+ V +G LA G+E
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQE 576
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 164/395 (41%), Gaps = 95/395 (24%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+HA+ + + N LID+Y K + A +FD
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD---------------------- 409
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSH---NLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+F A V L +NAM++ YS + H A+ +F M+ P +F
Sbjct: 410 ------IFAAADVVL-----FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWG----VMCVPSVLNTLLSCYICCASSTLVESPVL 199
++L A + + +Q+H + K+G + ++++ +CY C S LV
Sbjct: 459 SLLRASASLTSLGLS-KQIHGLMFKYGLNLDIFAGSALIDVYSNCY-CLKDSRLV----- 511
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
FDE ++ DL V WN+M +GYV
Sbjct: 512 -------FDE------------------MKVKDL---------------VIWNSMFAGYV 531
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
+ EEA + F ++ + DE+T+ ++++A+ N G++ H +L+ ++ + +
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN----ARRLEEAKFI 375
+ NAL+ Y KCG A + FD RD+V WN+++S Y N + L+ + +
Sbjct: 592 ----ITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
E E N +T+ ++S + +G E+ LK F M
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 144/345 (41%), Gaps = 85/345 (24%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV- 128
D + L++ YS AG + A K+F P R+ +S++ MV A +H+ ++ +F+
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPE--RNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 129 --RMKRDGFAPDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
R ++D +P+ + S+ + A S L W QL +VK G
Sbjct: 136 FWRTRKD--SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG--------------- 178
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
FD +D T +I Y+++ ++ AR + D +
Sbjct: 179 ---------------------FD------RDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
V W MISG V+ G + F ++ + D Y ++++SA G+Q+
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
HA++LR ++ S+ N LI Y KCG+++ A +
Sbjct: 272 HAHILRYGLEMDA----SLMNVLIDSYVKCGRVIAAHK---------------------- 305
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F +P +N+++WT ++SG ++ +E+++LF M
Sbjct: 306 ---------LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 135/357 (37%), Gaps = 88/357 (24%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D T AN+ A N S L + H +L G P I N L+D+Y K + AH
Sbjct: 554 DEFTFANMVTAAGNLASVQ--LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
FD + D+ + +N+++ +Y+++ +G
Sbjct: 612 AFDSAASRDV---------------------------------VCWNSVISSYANHGEGK 638
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+++ +M +G P+ +F VL A
Sbjct: 639 KALQMLEKMMSEGIEPNYITFVGVLSA--------------------------------- 665
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
C+ + LVE + F P ++ + M++ R L AR+L++
Sbjct: 666 ------CSHAGLVEDGLKQFELMLRFGIEPETEH----YVCMVSLLGRAGRLNKARELIE 715
Query: 242 GM-THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
M T P A+ W +++SG + G E A + +M + D ++T L + + G++
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELA-EHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774
Query: 301 CGRQLHA--YVLRTVVQPSEHFILSVNNALITFYTK----CGKLVQAREVFDKMPVR 351
+++ V V +P +I +N + F +K C K Q EV D + V+
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWI-GINKEVHIFLSKDKSHC-KANQIYEVLDDLLVQ 829
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 172/411 (41%), Gaps = 64/411 (15%)
Query: 10 FLAQLNHPSATQTLA--RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
+++ L S Q L+ R IH ++ G ++ N LID Y K N+ + FD
Sbjct: 319 YVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR 378
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ +I LLS Y+ N DG + LF
Sbjct: 379 DKNIVCWNALLSGYA----------------------------------NKDGPICLSLF 404
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
++M + GF P ++FST L + + QQLH +V+ G VL++L+ Y
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSCCVT-----ELQQLHSVIVRMGYEDNDYVLSSLMRSY-- 457
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG-YVRNDDLASARKLLDGMTHP 246
LM A L D A P ++AG Y R + KL+ + P
Sbjct: 458 -------AKNQLMNDALLLLDWASGPTSVVP--LNIVAGIYSRRGQYHESVKLISTLEQP 508
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V+WN I+ R +EE + F+ M I+ D+YT+ S++S G +H
Sbjct: 509 DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
+ +T ++ F V N LI Y KCG + +VF++ ++L++W A++S
Sbjct: 569 GLITKTDFSCADTF---VCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 367 RRLEEAKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EA F+E P+R +++ +++ G +E + LF +MK
Sbjct: 626 GYGQEALEKFKETLSLGFKPDR--VSFISILTACRHGGMVKEGMGLFQKMK 674
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 49/296 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F T LL Y +++AE++F P +T +N M+ H + F
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET--WNHMMSLLGHRGFLKECMFFFRE 205
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+ R G + SF VL +S + + + +QLHC K G+ C SV+N+L+S Y C
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDIS-KQLHCSATKKGLDCEISVVNSLISAYGKCG 264
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
++ + E ++F +D SW V
Sbjct: 265 NTHMAE---------RMF-------QDAGSWDI--------------------------V 282
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WNA+I + +A F M G ++ TY S++ S L +CGRQ+H +
Sbjct: 283 SWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
++ + + + NALI FY KCG L +R FD + +++V WNA+LSGY N
Sbjct: 343 IKNGCETG----IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 125/311 (40%), Gaps = 50/311 (16%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
++ ++S Y G V LA K+F+ P R+ +S+N ++K YS D A +F M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPE--RNKVSFNTIIKGYSKYGDVDKAWGVFSEM 106
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
+ G+ P+ STV G +S + + QLH +K+G+ + + T L C
Sbjct: 107 RYFGYLPNQ---STVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCL----- 158
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
Y R D L A ++ + M
Sbjct: 159 ------------------------------------YGRLDLLEMAEQVFEDMPFKSLET 182
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN M+S G +E FR++ MG + E ++ ++ + +QLH
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 242
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ + +SV N+LI+ Y KCG A +F D+VSWNAI+ +
Sbjct: 243 KKGLDCE----ISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPL 298
Query: 371 EAKFIFREVPE 381
+A +F +PE
Sbjct: 299 KALKLFVSMPE 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 61/350 (17%)
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
K + +I +L+SAY GN +AE++F D +S+NA++ A + + + A+
Sbjct: 244 KGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW--DIVSWNAIICATAKSENPLKAL 301
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLS 183
KLFV M GF+P+ ++ +VLG SL+ + C +Q+H ++K G + N L+
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLV--QLLSCGRQIHGMLIKNGCETGIVLGNALID 359
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y C + + +R FD Y+R+ ++
Sbjct: 360 FYAKCGN---------LEDSRLCFD------------------YIRDKNI---------- 382
Query: 244 THPIAVAWNAMISGYV-RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
V WNA++SGY + G F +M MG + EYT+++ + + T L
Sbjct: 383 -----VCWNALLSGYANKDG--PICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL---- 431
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD--KMPVRDLVSWNAIL 360
+QLH+ ++R + +++ + ++L+ Y K + A + D P +V N +
Sbjct: 432 QQLHSVIVRMGYEDNDYVL----SSLMRSYAKNQLMNDALLLLDWASGPT-SVVPLNIVA 486
Query: 361 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
Y + E+ + + + + ++W + I+ + S + EE ++LF M
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 133/348 (38%), Gaps = 52/348 (14%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP-DIFSRTT 76
S T + +H+ I+ G+ + + L+ Y K+ + A L D P +
Sbjct: 425 SCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNI 484
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
+ YS G + KL + + DT+S+N + A S + ++LF M +
Sbjct: 485 VAGIYSRRGQYHESVKLI--STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD ++F ++L C +L CD+
Sbjct: 543 PDKYTFVSILSL----------CSKL-CDLT----------------------------- 562
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
L +S L + S D +I Y + + S K+ + + W A+IS
Sbjct: 563 --LGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
HG +EA + F++ S+G + D ++ S+++A + G+ G L + V+P
Sbjct: 621 CLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEP 680
Query: 317 S-EHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSG 362
+H+ +V+ + G L +A + +MP D W L G
Sbjct: 681 EMDHYRCAVD-----LLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 31/350 (8%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATP-VTLRDTISYNAMVKA-YSHNLDGHAAVKLFVRMKRD 133
L+S Y+ G + A +F V L D +N+++KA SH L A++L+ M++
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLY-ENALELYRGMRQR 152
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G D + +L A + C+ H V++ G+ V+N LL TL
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGL-CRAFHTQVIQIGLKENLHVVNELL---------TL 202
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAV 249
M A LF E P+ ++ SW MI G+ + D SA K+ + M P V
Sbjct: 203 YPKAGRMGDAYNLFVEMPV--RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEV 260
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W +++S + + G +E+ F M G + S + ++H YV
Sbjct: 261 TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYV 320
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ + L NALI Y K GK+ A +F ++ + + SWN++++ +++A +L
Sbjct: 321 IKGGFEE----YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 370 EEAKFIFREVPER--------NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EA +F E+ E N++TWT +I G G G++SL+ F QM+
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 164/380 (43%), Gaps = 63/380 (16%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
LL+ Y AG + A LF PV R+ +S+N M+K +S D +AVK+F M+R+ F
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPV--RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 137 PDPFSFSTVLGAMSLIAEEE-----WH-----------------------------CQQL 162
PD ++++VL S + E +H +++
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H V+K G N L+ Y + A LF + + K SW +
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVY---------GKQGKVKDAEHLFRQ--IRNKGIESWNS 365
Query: 223 MIAGYVRNDDLASARKL---LDGMTHPI-----AVAWNAMISGYVRHGLYEEAFDTFRKM 274
+I +V L A L L+ M H V W ++I G G +++ + FR+M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
+ + T ++S N GR++H +V+RT + SE+ + V NAL+ Y K
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSM--SENIL--VQNALVNMYAK 481
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVM 390
CG L + VF+ + +DL+SWN+I+ GY E+A +F + + +
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 391 ISGLAESGFGEESLKLFNQM 410
+S + +G E+ ++F M
Sbjct: 542 LSACSHAGLVEKGREIFYSM 561
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 144/360 (40%), Gaps = 63/360 (17%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
++A +H +++ GF RN LI +Y K + A HLF + N I S +L++++
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 82 SAAGNVKLAEKLF------NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
AG + A LF N + +++ +++K + G +++ F +M+
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ---- 426
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
FS VL S ICC S E
Sbjct: 427 ------FSKVLAN----------------------------------SVTICCILSICAE 446
Query: 196 SPVLMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
P L R++ + E ++ Y + L+ + + + ++WN+
Sbjct: 447 LPALNL-GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNS 505
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRT 312
+I GY HG E+A F +M S G D +++SA + GL GR++ ++ R
Sbjct: 506 IIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRF 565
Query: 313 VVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++P EH+ ++ + G L +A E+ MP+ V +L +N+ R+ +
Sbjct: 566 GLEPQQEHYA-----CIVDLLGRVGFLKEASEIVKNMPMEPKV---CVLGALLNSCRMHK 617
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 150/340 (44%), Gaps = 50/340 (14%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
T +S Y G++ A+ +F A R +S+N+M KAYS + A L+ M R+ F
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PD +F +N SC TL +
Sbjct: 253 KPDLSTF-----------------------------------INLAASCQ---NPETLTQ 274
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
++ + A L + +D + T I+ Y +++D SAR L D MT V+W MI
Sbjct: 275 GRLIHSHAIHLG-----TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMI 329
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
SGY G +EA F M G + D T SLIS G G+ + A R +
Sbjct: 330 SGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA---RADIY 386
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKF 374
+ + + NALI Y+KCG + +AR++FD P + +V+W +++GY +N LE K
Sbjct: 387 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 446
Query: 375 IFREVP---ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ + + N +T+ ++ A SG E+ + F+ MK
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 143/359 (39%), Gaps = 56/359 (15%)
Query: 45 RLIDIYCKSSNIPYAHHLFDKTPN-PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
RL D+ C + +AH + K+P D+F T + + +V A K+F P RD
Sbjct: 64 RLADVGC--CEMVHAHLI--KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE--RD 117
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
++NAM+ + + A LF M+ + PD + T++ + S + + +H
Sbjct: 118 ATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL-LEAMH 176
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
++ GV +V NT +S Y C + SA+ +F+ +
Sbjct: 177 AVGIRLGVDVQVTVANTWISTYGKCGD---------LDSAKLVFEAIDRGDR-------- 219
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
V+WN+M Y G +AF + M + D
Sbjct: 220 -----------------------TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
T+ +L ++ N GR +H++ + I N I+ Y+K AR
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAI----NTFISMYSKSEDTCSARL 312
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESG 398
+FD M R VSW ++SGY ++EA +F + + +L+T +ISG + G
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AWN I V E+ FR+M G + + +T+ + A C +HA++
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+++ + V A + + KC + A +VF++MP RD +WNA+LSG+ +
Sbjct: 79 IKSPFWSD----VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 370 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
++A +FRE+ + +V + L +S E+SLKL M
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAM 175
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 51/261 (19%)
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
++N ++ + D ++ LF MKR GF P+ F+F V A + +A+ C+ +H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGC-CEMVHAH 77
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
++K V + ++ C S + A K+F+ P ++D +W
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNS---------VDYAAKVFERMP--ERDATTW----- 121
Query: 226 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 285
NAM+SG+ + G ++AF FR+M I D T
Sbjct: 122 --------------------------NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 286 YTSLI-SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
+LI SASF L +HA +R V ++V N I+ Y KCG L A+ V
Sbjct: 156 VMTLIQSASFEKSL-KLLEAMHAVGIRLGVDVQ----VTVANTWISTYGKCGDLDSAKLV 210
Query: 345 FDKMPVRD--LVSWNAILSGY 363
F+ + D +VSWN++ Y
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAY 231
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 186/458 (40%), Gaps = 101/458 (22%)
Query: 4 RTMANLFLAQL---NHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
R+ N +LA L + + IH I+ G + + NRL+D+Y + + YA
Sbjct: 2 RSGGNKYLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYAR 61
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+FD+ D++S L+ G++ A ++F+ P RD +S+N M+
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPE--RDVVSWNNMISVLVRKGFE 119
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ ++ RM DGF P F+ ++VL A S + + + + H VK G+ V N
Sbjct: 120 EKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG-MRCHGVAVKTGLDKNIFVGNA 178
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
LLS Y C ++ ++F+ LSQ +E S+T +I G LA K+L
Sbjct: 179 LLSMYAKCG--------FIVDYGVRVFE--SLSQPNEVSYTAVIGG------LARENKVL 222
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS------- 293
EA FR M G+Q+D ++++S S
Sbjct: 223 -------------------------EAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 294 -----FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+ L G+Q+H LR H +NN+L+ Y K + A +F +M
Sbjct: 258 SLSEIYGNEL---GKQIHCLALRLGFGGDLH----LNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 349 PVRDLVSWNAILSGYINARR-----------------------------------LEEAK 373
P ++VSWN ++ G+ R +E +
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 374 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
IF +P+ ++ W M+SG + EE++ F QM+
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 154/364 (42%), Gaps = 64/364 (17%)
Query: 68 NPDIFSRTTLLSAYSAAG-NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
+ +IF LLS Y+ G V ++F + ++ + +SY A++ + AV++
Sbjct: 170 DKNIFVGNALLSMYAKCGFIVDYGVRVFES--LSQPNEVSYTAVIGGLARENKVLEAVQM 227
Query: 127 FVRMKRDGFAPDPFSFSTVLG---------AMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
F M G D S +L ++S I E +Q+HC ++ G +
Sbjct: 228 FRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG-KQIHCLALRLGFGGDLHL 286
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY---------- 227
N+LL Y M A +F E P + + SW MI G+
Sbjct: 287 NNSLLEIY---------AKNKDMNGAELIFAEMP--EVNVVSWNIMIVGFGQEYRSDKSV 335
Query: 228 -------------------------VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
R+ D+ + R++ + P AWNAM+SGY +
Sbjct: 336 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
YEEA FR+M ++ D+ T + ++S+ G+Q+H V+RT + + H +
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV- 454
Query: 323 SVNNALITFYTKCGKLVQAREVFDK-MPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
+ LI Y++C K+ + +FD + D+ WN+++SG+ + +A +FR + +
Sbjct: 455 ---SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 382 RNLL 385
+L
Sbjct: 512 TAVL 515
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 182/429 (42%), Gaps = 88/429 (20%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP--------------- 67
L + IH L GF + N L++IY K+ ++ A +F + P
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 68 --------------------NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISY 107
P+ + ++L A +G+V+ ++F++ P ++
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQP--SVSAW 384
Query: 108 NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVV 167
NAM+ YS+ A+ F +M+ PD + S +L + + + E +Q+H V+
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG-KQIHGVVI 443
Query: 168 KWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY 227
+ + +++ L++ Y C + E +FD+
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISEC---------IFDDC----------------- 477
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTY 286
+ D+A WN+MISG+ + L +A FR+MH + +E ++
Sbjct: 478 INELDIA---------------CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+++S+ GRQ H V+++ S+ F V AL Y KCG++ AR+ FD
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDSF---VETALTDMYCKCGEIDSARQFFD 578
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEE 402
+ ++ V WN ++ GY + R +EA ++R++ + + +T+ +++ + SG E
Sbjct: 579 AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 403 SLKLFNQMK 411
L++ + M+
Sbjct: 639 GLEILSSMQ 647
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 53/291 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+ L++ YS ++++E +F+ L D +N+M+ + HN+ A+ LF RM +
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINEL-DIACWNSMISGFRHNMLDTKALILFRRMHQTA 513
Query: 135 -FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
P+ SF+TVL + S + H +Q H VVK G + S +
Sbjct: 514 VLCPNETSFATVLSSCSRLCSL-LHGRQFHGLVVKSGYV-----------------SDSF 555
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
VE T + Y + ++ SAR+ D + V WN
Sbjct: 556 VE-------------------------TALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT- 312
MI GY +G +EA +RKM S G + D T+ S+++A ++GL G ++ + + R
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650
Query: 313 VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++P +H+I ++ + G+L A ++ + P + V W +LS
Sbjct: 651 GIEPELDHYI-----CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 61/143 (42%), Gaps = 15/143 (10%)
Query: 9 LFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN 68
L L + H +A A +L++ RL L+ R H L K+
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF------------HGLVVKSGY 550
Query: 69 -PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
D F T L Y G + A + F+A V ++T+ +N M+ Y HN G AV L+
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDA--VLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 128 VRMKRDGFAPDPFSFSTVLGAMS 150
+M G PD +F +VL A S
Sbjct: 609 RKMISSGEKPDGITFVSVLTACS 631
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 169/391 (43%), Gaps = 71/391 (18%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+L R +H ++ GF + N L+ Y S ++ AH +FD+ P+P
Sbjct: 72 SLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP------------ 119
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
D IS+N++V Y + + LF+ + R P+ FS
Sbjct: 120 ---------------------DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFS 158
Query: 142 FSTVLGAMSLIAEEEWHCQQL----HCDVVKWGVMCVPSVL-NTLLSCYICCA------- 189
F+ L A + + H L H +VK G+ V+ N L+ Y C
Sbjct: 159 FTAALAACARL-----HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 190 -------SSTLVESPVLMASARK--------LFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
T+ + ++ + +R F + P D ++ +I +V++ D
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP--NPDTVTYNELIDAFVKSGDFN 271
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
+A ++L M +P + +WN +++GYV EA + F KMHS G++ DEY+ + +++A
Sbjct: 272 NAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVA 331
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
+ G +HA + + + V +ALI Y+KCG L A +F MP ++L+
Sbjct: 332 ALAVVPWGSLIHACAHKLGLDSR----VVVASALIDMYSKCGMLKHAELMFWTMPRKNLI 387
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNLL 385
WN ++SGY EA +F ++ + L
Sbjct: 388 VWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 3/184 (1%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y +D L A K+ D M P ++WN+++SGYV+ G ++E F ++H + +E+++
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
T+ ++A L G +H+ +++ ++ + V N LI Y KCG + A VF
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGN---VVVGNCLIDMYGKCGFMDDAVLVFQ 216
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
M +D VSWNAI++ +LE + F ++P + +T+ +I +SG + ++
Sbjct: 217 HMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQV 276
Query: 407 FNQM 410
+ M
Sbjct: 277 LSDM 280
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS---VNNALITFYTK 334
G + D L+ S N G + RQLH YV ++H +S ++N+L+ FY
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV-------TKHGFVSNTRLSNSLMRFYKT 102
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
L A +VFD+MP D++SWN+++SGY+ + R +E +F E+
Sbjct: 103 SDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLEL 147
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 155/338 (45%), Gaps = 53/338 (15%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
LL Y+ G++ A K+FN P D + ++ M+ + N + AV LF+RM+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKN--DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVV 345
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
P+ F+ S++L + I + +QLH VVK G V N L+ Y C
Sbjct: 346 PNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK------ 398
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
M +A KLF A LS K+E SW T+I GY ++L K
Sbjct: 399 ---MDTAVKLF--AELSSKNEVSWNTVIVGY---ENLGEGGK------------------ 432
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
AF FR+ + + E T++S + A + + G Q+H ++T
Sbjct: 433 ----------AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT---- 478
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ ++V+N+LI Y KCG + A+ VF++M D+ SWNA++SGY +A I
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 377 REVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +R N LT+ ++SG + +G ++ + F M
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 152/357 (42%), Gaps = 53/357 (14%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYC---KSSNIPYAHHLFDKTP-NPDIFSRTTLLSAY 81
+++ + G L P + + ++ K+ P+ H K + + F L++AY
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
S G+V A +F + +D + + +V Y N ++KL M+ GF P+ ++
Sbjct: 192 SVCGSVDSARTVFEG--ILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F T L A + ++ + +H ++K + P V LL Y M+
Sbjct: 250 FDTALKASIGLGAFDF-AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD---------MS 299
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
A K+F+E P +ND V W+ MI+ + ++
Sbjct: 300 DAFKVFNEMP-----------------KND----------------VVPWSFMIARFCQN 326
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EA D F +M + +E+T +S+++ G QLH V++
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD----LD 382
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
+ V+NALI Y KC K+ A ++F ++ ++ VSWN ++ GY N +A +FRE
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 64/350 (18%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+ K D+F+ LL+AY AG K A LF+ P R+ +S+ + + Y+
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPE--RNNVSFVTLAQGYA----CQ 128
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
+ L+ R+ R+G +P F++ L + + E C LH +VK G V L
Sbjct: 129 DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI-CPWLHSPIVKLGYDSNAFVGAAL 187
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
++ Y C S + SAR +F+ + KD W +++ YV N
Sbjct: 188 INAYSVCGS---------VDSARTVFE--GILCKDIVVWAGIVSCYVEN----------- 225
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
G +E++ M G + YT+ + + AS G F+
Sbjct: 226 --------------------GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 302 GRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
+ +H +L+T V+ P V L+ YT+ G + A +VF++MP D+V W+ +
Sbjct: 266 AKGVHGQILKTCYVLDP------RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFM 319
Query: 360 LSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAE---SGFGEE 402
++ + EA +F + E N T + +++G A SG GE+
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 53/317 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI+ L+ Y+ + A KLF ++ ++ +S+N ++ Y + +G A +F
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLF--AELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
R+ + +FS+ LGA + +A + Q +H +K +V N+L+ Y C
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQ-VHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
D+ A+ + + M
Sbjct: 499 ------------------------------------------DIKFAQSVFNEMETIDVA 516
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WNA+ISGY HGL +A M + + T+ ++S N GL + G++ +
Sbjct: 517 SWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESM 576
Query: 310 LRT-VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINA 366
+R ++P EH+ ++ + G+L +A ++ + +P ++ W A+LS +N
Sbjct: 577 IRDHGIEPCLEHY-----TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQ 631
Query: 367 RRLEEAKFIFREVPERN 383
E A+ E+ + N
Sbjct: 632 NNEEFARRSAEEILKIN 648
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCK----SSNIPYAHHLFDKTP-------NPDI 71
++H I+ G N L+++Y K S I + +FD+ P + D+
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN-VFDEMPQRTSNSGDEDV 181
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
+ T ++ + ++F P +D +SYN ++ Y+ + A+++ M
Sbjct: 182 KAETCIMPF-----GIDSVRRVFEVMP--RKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
PD F+ S+VL S + +++H V++ G+
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDV-IKGKEIHGYVIRKGI-------------------- 273
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+S V + S+ L D S + E S Y R+ ++W
Sbjct: 274 ---DSDVYIGSS--LVDMYAKSARIEDSERVFSRLYCRD-----------------GISW 311
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N++++GYV++G Y EA FR+M + ++ ++S+I A + + G+QLH YVLR
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
S FI S AL+ Y+KCG + AR++FD+M V D VSW AI+ G+ E
Sbjct: 372 GGF-GSNIFIAS---ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 372 AKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
A +F E+ + N + + +++ + G +E+ FN M
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 470
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC 164
+++ ++++ ++ A+ FV M+ G PD F +VL + +++ + + + +H
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG-ESVHG 129
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
+V+ G+ C N L++ Y A + S + S +FDE P +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMY---AKLLGMGSKI---SVGNVFDEMPQRTSNSGDEDVKA 183
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
+ + S R++ + M V++N +I+GY + G+YE+A R+M + ++ D +
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T +S++ G+++H YV+R + + + ++L+ Y K ++ + V
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSD----VYIGSSLVDMYAKSARIEDSERV 299
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
F ++ RD +SWN++++GY+ R EA +FR++
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 160/362 (44%), Gaps = 66/362 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
++ K + D++ ++L+ Y+ + ++ +E++F + + RD IS+N++V Y N
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF--SRLYCRDGISWNSLVAGYVQNGRY 324
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
+ A++LF +M P +FS+V+ A + +A +QLH V++ G + +
Sbjct: 325 NEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIASA 383
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y C + + +ARK+FD ++ DE SWT
Sbjct: 384 LVDMYSKCGN---------IKAARKIFDR--MNVLDEVSWT------------------- 413
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL-- 298
A+I G+ HG EA F +M G++ ++ + ++++A + GL
Sbjct: 414 ------------AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 299 -----FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
FN +++ + Q EH+ A+ + GKL +A KM V
Sbjct: 462 EAWGYFNSMTKVYG-----LNQELEHYA-----AVADLLGRAGKLEEAYNFISKMCVEPT 511
Query: 354 VS-WNAILSGYINARRLEEAKFIFRE---VPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
S W+ +LS + LE A+ + + V N+ + +M + A +G +E KL +
Sbjct: 512 GSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLR 571
Query: 410 MK 411
M+
Sbjct: 572 MR 573
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Query: 192 TLVESPVLMAS---ARKLFDEAPLSQK-DEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
TL+++P + S A++L + +Q S + +I+ Y L A L + P
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+AW ++I + L+ +A +F +M + G D + S++ + G +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKC---GKLVQAREVFDKMPVRDLVSWNAILSGY- 363
+++R + L NAL+ Y K G + VFD+MP R S + +
Sbjct: 130 FIVRLGMDCD----LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 364 -INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
I ++ + +F +P ++++++ +I+G A+SG E++L++ +M
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 152/348 (43%), Gaps = 55/348 (15%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFVR 129
+F +L S+ +V A ++F++ + + +N +++A +H++ A L+ +
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDS--IENHSSFMWNTLIRACAHDVSRKEEAFMLYRK 140
Query: 130 M-KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M +R +PD +F VL A + I +Q+HC +VK G V N L+ Y C
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFS-EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC 199
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
L ARK+FDE P R L
Sbjct: 200 GCLDL---------ARKVFDEMP------------------------ERSL--------- 217
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V+WN+MI VR G Y+ A FR+M + D YT S++SA G + G HA+
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
+LR +L V N+LI Y KCG L A +VF M RDL SWNA++ G+ R
Sbjct: 277 LLRKCDVDVAMDVL-VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 369 LEEAKFIF------REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
EEA F RE N +T+ ++ GF + + F+ M
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 57/298 (19%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ L+ Y + G + LA K+F+ P R +S+N+M+ A + +A++LF
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPE--RSLVSWNSMIDALVRFGEYDSALQLFRE 242
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL--SCYIC 187
M+R F PD ++ +VL A C L G + + + + L C +
Sbjct: 243 MQR-SFEPDGYTMQSVLSA----------CAGL-------GSLSLGTWAHAFLLRKCDVD 284
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
A LV++ ++I Y + L A ++ GM
Sbjct: 285 VAMDVLVKN-------------------------SLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
+WNAMI G+ HG EEA + F +M ++ + T+ L+ A + G N GRQ
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 306 HAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAIL 360
++R ++P+ EH+ ++ + G + +A ++ MP++ D V W ++L
Sbjct: 380 FDMMVRDYCIEPALEHY-----GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
+ +A+KLFDE P ++D S+T+MI GY + D+ SAR L + AW+A+I GY
Sbjct: 223 LVNAKKLFDEMP--KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++G EAF F +M + ++ DE+ L+SA G F ++ +Y+ + + + S H
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH 340
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+++ ALI KCG + +A ++F++MP RDLVS+ +++ G EA +F ++
Sbjct: 341 YVVP---ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 380 PERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ + + +TV++ +S EE L+ F M+
Sbjct: 398 VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMR 433
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQ 304
P WN +I GY L+ E +M G+ + DEYT+ ++ N G G
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H VLR + V + + FY KC L AR+VF +MP R+ VSW A++ Y+
Sbjct: 132 VHGLVLRIGFDKD----VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ LEEAK +F +PERNL +W ++ GL +SG + KLF++M
Sbjct: 188 KSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEM 233
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 124/308 (40%), Gaps = 87/308 (28%)
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQL 162
T +N ++K YS+ V + +RM R G A PD ++F V+ S
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCS------------ 121
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
G + V S ++ L+ R FD KD T+
Sbjct: 122 -----NNGQVRVGSSVHGLV--------------------LRIGFD------KDVVVGTS 150
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+ Y + DL SARK+ M AV+W A++ YV+ G EEA F M
Sbjct: 151 FVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE------ 204
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
R L ++ NAL+ K G LV A+
Sbjct: 205 --------------------RNLGSW-----------------NALVDGLVKSGDLVNAK 227
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
++FD+MP RD++S+ +++ GY + A+ +F E ++ W+ +I G A++G E
Sbjct: 228 KLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNE 287
Query: 403 SLKLFNQM 410
+ K+F++M
Sbjct: 288 AFKVFSEM 295
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 136/324 (41%), Gaps = 56/324 (17%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF-NATPVTLR 102
N L+D KS ++ A LFD+ P DI S T+++ Y+ G++ A LF A V +R
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
+++A++ Y+ N + A K+F M PD F ++G MS C Q+
Sbjct: 271 ---AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEF---IMVGLMSA-------CSQM 317
Query: 163 HC-DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
C ++ + + +N S Y+ A + M A KLF+E P Q+D
Sbjct: 318 GCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP--QRD----- 370
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
V++ +M+ G HG EA F KM GI
Sbjct: 371 --------------------------LVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVP 404
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEHFILSVNNALITFYTKCGKLV 339
DE +T ++ + L G + + + +++ +H+ + ++ ++ GKL
Sbjct: 405 DEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY-----SCIVNLLSRTGKLK 459
Query: 340 QAREVFDKMPVRDLVS-WNAILSG 362
+A E+ MP S W ++L G
Sbjct: 460 EAYELIKSMPFEAHASAWGSLLGG 483
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 142/342 (41%), Gaps = 81/342 (23%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F T L+ AYS +K AE LF D +++NAM+ Y+ + DGH +KLF
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFERHNF---DLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M + G D F+ +TV + +Q+H +K G V + +L Y+ C
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAIN-QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCG 566
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
D+++A+ D + P V
Sbjct: 567 ------------------------------------------DMSAAQFAFDSIPVPDDV 584
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
AW MISG + +G E AF F +M MG+ DE+T +L AS GRQ+HA
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+ ++ F V +L+ Y KCG + A +F ++ + ++ +WNA
Sbjct: 645 LKLNC-TNDPF---VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA----------- 689
Query: 370 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
M+ GLA+ G G+E+L+LF QMK
Sbjct: 690 --------------------MLVGLAQHGEGKETLQLFKQMK 711
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 61/338 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG-----HA 122
NP+ F L+S YS G++ A ++F+ P RD +S+N+++ AY+ + +
Sbjct: 71 NPERFLINNLISMYSKCGSLTYARRVFDKMPD--RDLVSWNSILAAYAQSSECVVENIQQ 128
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A LF +++D + S +L + L + W + H K G+ V L+
Sbjct: 129 AFLLFRILRQDVVYTSRMTLSPML-KLCLHSGYVWASESFHGYACKIGLDGDEFVAGALV 187
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND------DLASA 236
+ Y+ + + LF+E P +D W M+ Y+ DL+SA
Sbjct: 188 NIYLKFGK---------VKEGKVLFEEMPY--RDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 237 ------------RKLL--------------------DGMTHPIAVAWNAMISGYVRHGLY 264
+LL D + + N +S Y+ G Y
Sbjct: 237 FHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQY 296
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
F M ++ D+ T+ +++ + G+Q+H L+ + +L+V
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLD----LMLTV 352
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+N+LI Y K K AR VFD M RDL+SWN++++G
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 159/361 (44%), Gaps = 47/361 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ + H + G + L++IY K + LF++ P D+ +L AY
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 84 AGNVKLAEKL--------FNATPVTLR------DTISYNAMVKAYSHNLDGHAAVKLFVR 129
G + A L N +TLR S VK++++ D + ++ R
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV-LNTL-LSCYIC 187
K +S +L + + E + + CD V + +M +V +++L L +
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESD-----VECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + L +L S ++I Y + AR + D M+
Sbjct: 339 CMALKLGLDLMLTVS------------------NSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA--SFNTGLFNCGRQL 305
++WN++I+G ++GL EA F ++ G++ D+YT TS++ A S GL + +Q+
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL-SLSKQV 439
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H + ++ + S+ F V+ ALI Y++ + +A +F++ DLV+WNA+++GY
Sbjct: 440 HVHAIK-INNVSDSF---VSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQ 494
Query: 366 A 366
+
Sbjct: 495 S 495
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL-----YEEAFDTFRKMHSM 277
+I+ Y + L AR++ D M V+WN++++ Y + ++AF FR +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
+ T + ++ ++G H Y + + E V AL+ Y K GK
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF----VAGALVNIYLKFGK 195
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
+ + + +F++MP RD+V WN +L Y+ EEA
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 13/107 (12%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ HA +L T + E F++ N LI+ Y+KCG L AR VFDKMP RDLVSWN+IL+
Sbjct: 58 GKCTHARIL-TFEENPERFLI---NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 362 GYINA-----RRLEEAKFIFR----EVPERNLLTWTVMISGLAESGF 399
Y + +++A +FR +V + +T + M+ SG+
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 19/241 (7%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ + +L Y G++ A+ F++ PV D +++ M+ N + A +F +
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVP--DDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD F+ +T+ A S + E +Q+H + +K P V +L+ Y C
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALE-QGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----H 245
S + A LF + + +W M+ G ++ + +L M
Sbjct: 668 S---------IDDAYCLFKR--IEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQMDEYTYTSLISASFNTGLFNCGRQ 304
P V + ++S GL EA+ R MH GI+ + Y+ L A GL
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAEN 776
Query: 305 L 305
L
Sbjct: 777 L 777
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 62/343 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T +S YS G +K+ LF D ++YNAM+ Y+ N + ++ LF + G
Sbjct: 260 TGFISLYSKCGKIKMGSALFR--EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 135 F---APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
+ S V G + LI +C +K + SV L + Y S
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYC-------LKSNFLSHASVSTALTTVY-----S 365
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
L E + SARKLFDE+P +K PSW MI+GY +N
Sbjct: 366 KLNE----IESARKLFDESP--EKSLPSWNAMISGYTQN--------------------- 398
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
GL E+A FR+M + T T ++SA G + G+ +H V
Sbjct: 399 ----------GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
T + S + V+ ALI Y KCG + +AR +FD M ++ V+WN ++SGY + +E
Sbjct: 449 TDFESS----IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504
Query: 372 AKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
A IF E+ + +T+ ++ + +G +E ++FN M
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSM 547
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 139/320 (43%), Gaps = 63/320 (19%)
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
V+ A K+F+ P +DTI +N M+ Y N ++++F + + + +T+L
Sbjct: 170 VEDARKVFDRMPE--KDTILWNTMISGYRKNEMYVESIQVFRDLINE--SCTRLDTTTLL 225
Query: 147 GAMSLIAE--EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
+ +AE E Q+H K G VL +S Y C + M SA
Sbjct: 226 DILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK-------IKMGSA- 277
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
LF E P VA+NAMI GY +G
Sbjct: 278 -LFRE---------------------------------FRKPDIVAYNAMIHGYTSNGET 303
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI--L 322
E + F+++ G ++ T SL+ S + L +H Y L++ +F+
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKS------NFLSHA 354
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
SV+ AL T Y+K ++ AR++FD+ P + L SWNA++SGY E+A +FRE+ +
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 383 ----NLLTWTVMISGLAESG 398
N +T T ++S A+ G
Sbjct: 415 EFSPNPVTITCILSACAQLG 434
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 75/320 (23%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L + YS ++ A KLF+ +P + S+NAM+ Y+ N A+ LF M++
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPE--KSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHC-DVVKWGVMCVPS--------VLNTLLSCY 185
F+P+P + + +L A C QL + KW V S V L+ Y
Sbjct: 416 FSPNPVTITCILSA----------CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C S +A AR+LFD +++K+E +W TMI+GY G+
Sbjct: 466 AKCGS---------IAEARRLFD--LMTKKNEVTWNTMISGY--------------GL-- 498
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
HG +EA + F +M + GI T+ ++ A + GL G ++
Sbjct: 499 ---------------HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 306 -HAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 362
++ + R +PS +H+ ++ + G L +A + + M + S W +L
Sbjct: 544 FNSMIHRYGFEPSVKHYA-----CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL-- 596
Query: 363 YINARRLEEAKFIFREVPER 382
A R+ + + R V E+
Sbjct: 597 --GACRIHKDTNLARTVSEK 614
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 144/344 (41%), Gaps = 57/344 (16%)
Query: 43 RNRLIDIYCKSSNIPY-----AHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNAT 97
+N +D + +S++I + A + N DI T L S G + A +F
Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGFRN-DISLLTKLTQRLSDLGAIYYARDIF--L 76
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPFSFSTVLGAMSLIAEEE 156
V D +N +++ +S N H+++ +F +++ P+ +++ + A S ++
Sbjct: 77 SVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDR 136
Query: 157 WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
+ +H V G C S L+ S ++
Sbjct: 137 A-GRVIHGQAVVDG-----------------CDSELLLGSNIV----------------- 161
Query: 217 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-H 275
M + R +D ARK+ D M + WN MISGY ++ +Y E+ FR + +
Sbjct: 162 -----KMYFKFWRVED---ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
++D T ++ A G Q+H+ +T S ++L+ I+ Y+KC
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY-SHDYVLT---GFISLYSKC 269
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
GK+ +F + D+V++NA++ GY + E + +F+E+
Sbjct: 270 GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 145/286 (50%), Gaps = 19/286 (6%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKL-FVRMKRDGFAPDP--FSFSTVLGAMSLIAEEEWHC 159
+T Y A++ AYS +L HA+ F R+ + P P F + VL + ++ +
Sbjct: 87 NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA-FST 145
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
+H + K G V LL Y S + AR+LFDE +S+++ S
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL--------ARQLFDE--MSERNVVS 195
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMG 278
WT M++GY R+ D+++A L + M +WNA+++ ++GL+ EA FR+M +
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
I+ +E T ++SA TG + +HA+ R + S+ F V+N+L+ Y KCG L
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS-SDVF---VSNSLVDLYGKCGNL 311
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
+A VF + L +WN++++ + R EEA +F E+ + N+
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 143/344 (41%), Gaps = 58/344 (16%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKS-SNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
+H H+ +GF L +++ L+ Y S S+I A LFD+ ++ S T +LS Y+ +G
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPFSFST 144
++ A LF P RD S+NA++ A + N AV LF RM + P+ +
Sbjct: 208 DISNAVALFEDMPE--RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVC 265
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
VL A + + + +H + + V N+L+ Y C + S MAS +
Sbjct: 266 VLSACAQTGTLQL-AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKK 324
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
L AWN+MI+ + HG
Sbjct: 325 SL------------------------------------------TAWNSMINCFALHGRS 342
Query: 265 EEAFDTFRKMHSMG---IQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQPS-EH 319
EEA F +M + I+ D T+ L++A + GL + GR + R ++P EH
Sbjct: 343 EEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEH 402
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
+ LI + G+ +A EV M ++ D W ++L+
Sbjct: 403 Y-----GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 24/191 (12%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVR----HGLYEEAFDTFRKMHSMGI-QMDEYTY 286
+L+ AR + D + P + A+++ Y H AF FR M + + + + + Y
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHA--SSAFSFFRLMVNRSVPRPNHFIY 129
Query: 287 ------TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY-TKCGKLV 339
T +S++F+T L +H ++ ++ H + V AL+ Y + +
Sbjct: 130 PLVLKSTPYLSSAFSTPL------VHTHLFKS----GFHLYVVVQTALLHSYASSVSHIT 179
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
AR++FD+M R++VSW A+LSGY + + A +F ++PER++ +W +++ ++G
Sbjct: 180 LARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGL 239
Query: 400 GEESLKLFNQM 410
E++ LF +M
Sbjct: 240 FLEAVSLFRRM 250
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 165/370 (44%), Gaps = 59/370 (15%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYA---HHLFDKTPNPDIFSRTTLLSAYSAAGNV 87
++ GFR ++ ++ + + ++ H K P+ D T LL Y+ G +
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEI 192
Query: 88 KLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLG 147
K A K+FN +TLR+ + + +M+ Y N + LF RM+ + + +++ T++
Sbjct: 193 KSAHKVFN--DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 148 A---MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASAR 204
A +S + + +W H +VK G+ L SC +
Sbjct: 251 ACTKLSALHQGKW----FHGCLVKSGI--------ELSSCLV------------------ 280
Query: 205 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
T+++ YV+ D+++AR++ + +H V W AMI GY +G
Sbjct: 281 ----------------TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
EA F+KM + I+ + T S++S GR +H ++ + + +V
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-----NV 379
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
NAL+ Y KC + A+ VF+ +D+V+WN+I+SG+ + EA F+F + ++
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 385 LTWTVMISGL 394
V ++ L
Sbjct: 440 TPNGVTVASL 449
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 147/328 (44%), Gaps = 54/328 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI T L+S Y G K A +F+ P D + M++ Y N + VKL+
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEP--DFYLWKVMLRCYCLNKESVEVVKLYDL 132
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+ + GF D FS L A + + + + + +++HC +VK VPS N +L
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLD-NGKKIHCQLVK-----VPSFDNVVL------- 179
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
T ++ Y + ++ SA K+ + +T V
Sbjct: 180 -------------------------------TGLLDMYAKCGEIKSAHKVFNDITLRNVV 208
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W +MI+GYV++ L EE F +M + +EYTY +LI A + G+ H +
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL 268
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+++ ++ S + S L+ Y KCG + AR VF++ DLV W A++ GY + +
Sbjct: 269 VKSGIELSSCLVTS----LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 370 EEAKFIFREVP----ERNLLTWTVMISG 393
EA +F+++ + N +T ++SG
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSG 352
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 148/340 (43%), Gaps = 52/340 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T+LL Y G++ A ++FN D + + AM+ Y+HN + A+ LF +MK
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHV--DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ + ++VL LI E + +H +K G+ +V N L+ Y C +
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELG-RSVHGLSIKVGIW-DTNVANALVHMYAKCYQNR-- 394
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
A+ +F+ S+KD +W ++I+G+ +N
Sbjct: 395 -------DAKYVFEME--SEKDIVAWNSIISGFSQN------------------------ 421
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
G EA F +M+S + + T SL SA + G G LHAY ++
Sbjct: 422 -------GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
S + V AL+ FY KCG AR +FD + ++ ++W+A++ GY +
Sbjct: 475 LASSS--VHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLE 532
Query: 375 IFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+F E+ ++ N T+T ++S +G E K F+ M
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 52/316 (16%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
+D +++N+++ +S N H A+ LF RM + P+ + +++ A
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA------------- 452
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
C + +L L A + KL L+ T
Sbjct: 453 -------------------------CASLGSLAVGSSLHAYSVKL---GFLASSSVHVGT 484
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
++ Y + D SAR + D + + W+AMI GY + G + + F +M +
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEHFILSVNNALITFYTKCGKLV 339
+E T+TS++SA +TG+ N G++ + + + ++H+ ++ + G+L
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHY-----TCMVDMLARAGELE 599
Query: 340 QAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPER--NLLTWTVMISGL-A 395
QA ++ +KMP++ D+ + A L G R + + + +++ + + ++ V++S L A
Sbjct: 600 QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
Query: 396 ESGFGEESLKLFNQMK 411
G ++ ++ N MK
Sbjct: 660 SDGRWNQAKEVRNLMK 675
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 53/341 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T L+ Y+ G+++ A +LF+ + R+ +S+N+M+ AY N + A+ +F +M +G
Sbjct: 275 TALVDMYAKCGSLETARQLFDG--MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P S L A + + + E + +H V+ G+ SV+N+L+S Y C
Sbjct: 333 VKPTDVSVMGALHACADLGDLE-RGRFIHKLSVELGLDRNVSVVNSLISMYCKC------ 385
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
++ +A + + V+WNAM
Sbjct: 386 ------------------------------------KEVDTAASMFGKLQSRTLVSWNAM 409
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I G+ ++G +A + F +M S ++ D +TY S+I+A + + + +H V+R+ +
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ + V AL+ Y KCG ++ AR +FD M R + +WNA++ GY + A
Sbjct: 470 DKN----VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 375 IFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F E+ + N +T+ +IS + SG E LK F MK
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 147/322 (45%), Gaps = 49/322 (15%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
F +T L+S + G+V A ++F P+ + + Y+ M+K ++ D A++ FVRM+
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFE--PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMR 127
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
D P ++F+ +L AE +++H +VK G
Sbjct: 128 YDDVEPVVYNFTYLLKVCGDEAELRVG-KEIHGLLVKSGF-------------------- 166
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ LF + T + Y + + ARK+ D M V+W
Sbjct: 167 -----------SLDLF-----------AMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N +++GY ++G+ A + + M ++ T S++ A L + G+++H Y +R
Sbjct: 205 NTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMR 264
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ +++++ AL+ Y KCG L AR++FD M R++VSWN+++ Y+ +E
Sbjct: 265 SGFDS----LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 372 AKFIFREVPERNLLTWTVMISG 393
A IF+++ + + V + G
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMG 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 122/292 (41%), Gaps = 57/292 (19%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+L+S Y V A +F + R +S+NAM+ ++ N A+ F +M+
Sbjct: 376 NSLISMYCKCKEVDTAASMFG--KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD F++ +V+ A++ ++ H + +H V++ SC
Sbjct: 434 VKPDTFTYVSVITAIAELSITH-HAKWIHGVVMR--------------SCL--------- 469
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
K+ T ++ Y + + AR + D M+ WNAM
Sbjct: 470 -------------------DKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I GY HG + A + F +M I+ + T+ S+ISA ++GL G L+
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG-------LKCFY 563
Query: 315 QPSEHFILSVN----NALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILS 361
E++ + ++ A++ + G+L +A + +MPV+ V+ + A+L
Sbjct: 564 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 167/398 (41%), Gaps = 69/398 (17%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ +HAH L TG T + RL+ I N+ YA LFD N F
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFL----------- 49
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
YN +++AY + H ++ L+ + DG P +F+
Sbjct: 50 ----------------------YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNF 87
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY-----ICCASSTLVESPVL 199
+ A + + + LH + G TL++ Y +CCA
Sbjct: 88 IFAASASFSSAR-PLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCA---------- 136
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
R++FDE +S++D P W MI GY R D+ +A +L D M +W +ISG+
Sbjct: 137 ----RRVFDE--MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFS 190
Query: 260 RHGLYEEAFDTFRKMHS-MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
++G Y EA F M ++ + T S++ A N G GR+L Y +
Sbjct: 191 QNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDN- 249
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIF- 376
+ V NA I Y+KCG + A+ +F+++ R+L SWN+++ + +EA +F
Sbjct: 250 ---IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFA 306
Query: 377 ---REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
RE + + +T+ ++ G + +LF M+
Sbjct: 307 QMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 145/341 (42%), Gaps = 53/341 (15%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
R +H+ +GF LI Y K + A +FD+ D+ +++ Y
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPFSFS 143
G++K A +LF++ P ++ S+ ++ +S N + A+K+F+ M++D P+ +
Sbjct: 162 GDMKAAMELFDSMP--RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVV 219
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+VL A + + E E ++L + G + Y+C A+ + ++ A
Sbjct: 220 SVLPACANLGELEIG-RRLEGYARENGF---------FDNIYVCNATIEMYSKCGMIDVA 269
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
++LF+E L + R L +WN+MI HG
Sbjct: 270 KRLFEE-----------------------LGNQRNL---------CSWNSMIGSLATHGK 297
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV--LRTVVQPSEHFI 321
++EA F +M G + D T+ L+ A + G+ G++L + + + EH+
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY- 356
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+I + GKL +A ++ MP++ D V W +L
Sbjct: 357 ----GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLG 393
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 84/392 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+ IH + GF L + + L+D+Y K + A +F K P +
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL------------ 274
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
+++N+M+K Y D + V++ RM +G P + +
Sbjct: 275 ---------------------VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++L A S + H + +H V++ V V +L+ Y C + L E+
Sbjct: 314 SILMACSR-SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET------- 365
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+F + +QKD +A +WN MIS Y+ G
Sbjct: 366 --VFSK---TQKD------------------------------VAESWNVMISSYISVGN 390
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
+ +A + + +M S+G++ D T+TS++ A G+Q+H + + ++ E +
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLL-- 448
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
+AL+ Y+KCG +A +F+ +P +D+VSW ++S Y + + EA + F E+ +
Sbjct: 449 --SALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 384 L----LTWTVMISGLAESGFGEESLKLFNQMK 411
L +T ++S +G +E LK F+QM+
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 167/405 (41%), Gaps = 75/405 (18%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R IH ++ +G+ ++ + L+ +Y K + + +FD+ P
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE-------------- 170
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
RD S+N ++ + + + A++LF RM+ GF P+ S
Sbjct: 171 -------------------RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ + A S + E +++H VK G V + L+ Y C +
Sbjct: 212 TVAISACSRLLWLE-RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC---------LEV 261
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGY 258
AR++F + P +K +W +MI GYV D S ++L+ M T P +++
Sbjct: 262 AREVFQKMP--RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 259 VR-----HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
R HG + + R + + D Y SLI F G A + TV
Sbjct: 320 SRSRNLLHGKFIHGY-VIRSV----VNADIYVNCSLIDLYFKCG--------EANLAETV 366
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM---PVR-DLVSWNAILSGYINARRL 369
++ + N +I+ Y G +A EV+D+M V+ D+V++ ++L L
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 370 EEAKFIFREVPERNLLTWTVMISGL----AESGFGEESLKLFNQM 410
E+ K I + E L T +++S L ++ G +E+ ++FN +
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 148/351 (42%), Gaps = 61/351 (17%)
Query: 5 TMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH---- 60
+M ++A+ + S + L R I G R + ++ +S N+ +
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMI-----IEGTRPSQTTLTSILMACSRSRNLLHGKFIHG 333
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
++ N DI+ +L+ Y G LAE +F+ T + + S+N M+ +Y +
Sbjct: 334 YVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE--SWNVMISSYISVGNW 391
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
AV+++ +M G PD +F++VL A S +A E +Q+H + + + +L+
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE-KGKQIHLSISESRLETDELLLSA 450
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
LL Y C + A ++F+ P +KD SWT
Sbjct: 451 LLDMYSKCGNEK---------EAFRIFNSIP--KKDVVSWTV------------------ 481
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
MIS Y HG EA F +M G++ D T +++SA + GL +
Sbjct: 482 -------------MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 301 CGRQLHAYVL-RTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
G + + + + ++P EH+ + +I + G+L++A E+ + P
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHY-----SCMIDILGRAGRLLEAYEIIQQTP 574
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 10/188 (5%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGM-THPIAVAWNAMISGYVRHGLYEEAFDTFR 272
++D ++I Y D SAR + + WN+++SGY ++ ++ + + F+
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 273 KMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
++ + I + D +T+ ++I A G GR +H V+++ + V ++L+
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCD----VVVASSLVGM 151
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTW 387
Y K + +VFD+MP RD+ SWN ++S + + E+A +F + E N ++
Sbjct: 152 YAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSL 211
Query: 388 TVMISGLA 395
TV IS +
Sbjct: 212 TVAISACS 219
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 161/339 (47%), Gaps = 61/339 (17%)
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG---HAAVKLFVRMKRDGFAPDP 139
A + A +F+ + L ++ +N +++A HN+ H+ + +++RM+ +PD
Sbjct: 4 GAAIIAYANPIFHIRHLKL-ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDF 62
Query: 140 FSFSTVLGAMSLIAEEEWHC---QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
+F +L + H Q+ H ++ +G+ P V +LL+ Y C
Sbjct: 63 HTFPFLLPSF----HNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGD------ 112
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+ SA+++FD++ KD P+W +++ Y + + ARKL D M ++W+ +I+
Sbjct: 113 ---LRSAQRVFDDS--GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLIN 167
Query: 257 GYVRHGLYEEAFDTFRKMH-----SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
GYV G Y+EA D FR+M ++ +E+T ++++SA G G+ +HAY+ +
Sbjct: 168 GYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDK 227
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
V+ + + ALI Y KCG L +A+ VF NA+ S
Sbjct: 228 YHVEID----IVLGTALIDMYAKCGSLERAKRVF-----------NALGS---------- 262
Query: 372 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
++++ ++ MI LA G +E +LF++M
Sbjct: 263 ---------KKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 157/353 (44%), Gaps = 66/353 (18%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + HA IL G P +R L+++Y ++ A +FD + + D+ + ++++AY+
Sbjct: 80 LGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYA 139
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK----RDGFA-P 137
AG + A KLF+ P R+ IS++ ++ Y A+ LF M+ + F P
Sbjct: 140 KAGLIDDARKLFDEMPE--RNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 138 DPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT-LLSCYICCASSTL 193
+ F+ STVL G + + + +W +H + K+ V + VL T L+ Y C S
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKW----VHAYIDKYHVE-IDIVLGTALIDMYAKCGS--- 249
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ A+++F+ A S+KD A++A
Sbjct: 250 ------LERAKRVFN-ALGSKKD-------------------------------VKAYSA 271
Query: 254 MISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
MI +GL +E F F +M S I + T+ ++ A + GL N G+ ++
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 313 V-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
+ PS +H+ ++ Y + G + +A MP+ D++ W ++LSG
Sbjct: 332 FGITPSIQHY-----GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 251 WNAMISGYV-------RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
WN +I V RH + +M + + D +T+ L+ + N G+
Sbjct: 27 WNIIIRAIVHNVSSPQRH----SPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+ HA +L + V +L+ Y+ CG L A+ VFD +DL +WN++++ Y
Sbjct: 83 RTHAQILLFGLDKDPF----VRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAY 138
Query: 364 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
A +++A+ +F E+PERN+++W+ +I+G G +E+L LF +M+
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 167/401 (41%), Gaps = 72/401 (17%)
Query: 17 PSA-TQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRT 75
P A T L I A L G ++ LI N P H NP + S+
Sbjct: 131 PEAYTDLLHACISAKSLHHGIKICSLILNN-----------PSLRH------NPKLLSK- 172
Query: 76 TLLSAYSAAGNVKLAEKLFN-ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
L++ +S + LA K+F+ T +L + AM YS N A+ ++V M
Sbjct: 173 -LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSF 231
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P FS S L A + + + +H +VK V N LL Y
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVG-RGIHAQIVKRKEKVDQVVYNVLLKLY--------- 281
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
M S LFD+A RK+ DGM+ V WN++
Sbjct: 282 -----MESG--LFDDA--------------------------RKVFDGMSERNVVTWNSL 308
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
IS + E F+ FRKM I T T+++ A G+++HA +L++
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+P + N+L+ Y KCG++ +R VFD M +DL SWN +L+ Y +EE
Sbjct: 369 KPDVPLL----NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVIN 424
Query: 375 IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+F + E + +T+ ++SG +++G E L LF +MK
Sbjct: 425 LFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 170/411 (41%), Gaps = 86/411 (20%)
Query: 5 TMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD 64
+M L L +P A R IHAH++ G I ++++Y K + A +FD
Sbjct: 185 SMYTTLLKSLVNPRALD-FGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
+ + T L+ Y+ AG RD A+
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRA--------------RD-------------------AL 270
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
KLFV + +G D F FS VL A + + E +Q+H V K G+ SV L+
Sbjct: 271 KLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG-KQIHACVAKLGLESEVSVGTPLVDF 329
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
YI C+S SA + F E +
Sbjct: 330 YIKCSS---------FESACRAFQE---------------------------------IR 347
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ-MDEYTYTSLISASFNTGLFNCGR 303
P V+W+A+ISGY + +EEA TF+ + S ++ +TYTS+ A N G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
Q+HA ++ + S++ +ALIT Y+KCG L A EVF+ M D+V+W A +SG+
Sbjct: 408 QVHADAIKRSLIGSQY----GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463
Query: 364 INARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
EA +F ++ + N +T+ +++ + +G E+ + M
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM 514
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y L A KL D M+ AV+ MIS Y G+ ++A F M + G + Y
Sbjct: 128 YCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
T+L+ + N + GRQ+HA+V+R + + S+ ++ Y KCG LV A+ VFD
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSN----TSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+M V+ V+ ++ GY A R +A +F
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 147/384 (38%), Gaps = 101/384 (26%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IHA + G + L+D Y K S+ A F + P+ S + ++S Y
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 361
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ A K F +LR S NA + + F+
Sbjct: 362 CQMSQFEEAVKTFK----SLR---SKNASI-------------------------LNSFT 389
Query: 142 FSTVLGAMSLIAEEEWHCQ---QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
++++ A S++A+ C Q+H D +K
Sbjct: 390 YTSIFQACSVLAD----CNIGGQVHADAIK------------------------------ 415
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
R L SQ E + TM Y + L A ++ + M +P VAW A ISG+
Sbjct: 416 -----RSLIG----SQYGESALITM---YSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS 317
+G EA F KM S G++ + T+ ++++A + GL G+ +LR V P+
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPT 523
Query: 318 -EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFI 375
+H+ + +I Y + G L +A + MP D +SW LSG + LE +
Sbjct: 524 IDHY-----DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIA 578
Query: 376 FREV----PER--------NLLTW 387
E+ PE NL TW
Sbjct: 579 GEELRQLDPEDTAGYVLPFNLYTW 602
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
++H N + +H EAF+ ++M G+ + Y+Y L A + G
Sbjct: 43 ISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHG 102
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
R LH + + PS + + N ++ Y +C L A ++FD+M + VS ++S
Sbjct: 103 RLLHDRMRMGIENPS----VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISA 158
Query: 363 YINARRLEEAKFIF 376
Y L++A +F
Sbjct: 159 YAEQGILDKAVGLF 172
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 142/337 (42%), Gaps = 80/337 (23%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H IL +GF + N L+ Y K+ + A +FD+
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--------------------- 255
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
+T RD IS+N+++ Y N + +FV+M G D
Sbjct: 256 ------------MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID-------- 295
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
L T++S + CA S L+ L + +
Sbjct: 296 -------------------------------LATIVSVFAGCADSRLIS---LGRAVHSI 321
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
+A S++D T++ Y + DL SA+ + M+ V++ +MI+GY R GL E
Sbjct: 322 GVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A F +M GI D YT T++++ L + G+++H ++ + F + V+N
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG----FDIFVSN 436
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
AL+ Y KCG + +A VF +M V+D++SWN I+ GY
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 51/317 (16%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ ++ S+ +L+ Y+ G++K A ++F+ V + + +N ++ + + D ++ LF
Sbjct: 128 DSNLGSKLSLM--YTNCGDLKEASRVFD--EVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+M G D ++FS V + S + +QLH ++K G SV N+L
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG-EQLHGFILKSGFGERNSVGNSL------ 236
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+A Y++N + SARK+ D MT
Sbjct: 237 ------------------------------------VAFYLKNQRVDSARKVFDEMTERD 260
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
++WN++I+GYV +GL E+ F +M GI++D T S+ + ++ L + GR +H+
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
++ + F N L+ Y+KCG L A+ VF +M R +VS+ ++++GY
Sbjct: 321 IGVKACFSREDRFC----NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 368 RLEEAKFIFREVPERNL 384
EA +F E+ E +
Sbjct: 377 LAGEAVKLFEEMEEEGI 393
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 142/354 (40%), Gaps = 102/354 (28%)
Query: 72 FSR-----TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
FSR TLL YS G++ A+ +F ++ R +SY +M+ Y+ AVKL
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFR--EMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMS---LIAE----EEW-HCQQLHCDVVKWGVMCVPSVL 178
F M+ +G +PD ++ + VL + L+ E EW L D+ V
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF---------VS 435
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
N L+ Y C S M A +F E +R D+
Sbjct: 436 NALMDMYAKCGS---------MQEAELVFSE------------------MRVKDI----- 463
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTG 297
++WN +I GY ++ EA F + DE T ++ A +
Sbjct: 464 ----------ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
F+ GR++H Y++R H V N+L+ Y KCG L+ A +FD + +DLVSW
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRH----VANSLVDMYAKCGALLLAHMLFDDIASKDLVSW- 568
Query: 358 AILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
TVMI+G GFG+E++ LFNQM+
Sbjct: 569 ------------------------------TVMIAGYGMHGFGKEAIALFNQMR 592
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y DL A ++ D + A+ WN +++ + G + + F+KM S G++MD YT+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 287 TSLISASFNT-GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
S +S SF++ + G QLH ++L++ SV N+L+ FY K ++ AR+VF
Sbjct: 199 -SCVSKSFSSLRSVHGGEQLHGFILKSGFGERN----SVGNSLVAFYLKNQRVDSARKVF 253
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAES 397
D+M RD++SWN+I++GY++ E+ +F ++ E +L T + +G A+S
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 138/297 (46%), Gaps = 54/297 (18%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF-V 128
DIF L+ Y+ G+++ AE +F + + ++D IS+N ++ YS N + A+ LF +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVF--SEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
++ F+PD + + VL A + ++ + +++H +++ G V N+L+ Y C
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFD-KGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ L A LFD+ ++ KD SWT MIAGY GM
Sbjct: 548 GALLL---------AHMLFDD--IASKDLVSWTVMIAGY--------------GM----- 577
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHA 307
HG +EA F +M GI+ DE ++ SL+ A ++GL + G R +
Sbjct: 578 ------------HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI 625
Query: 308 YVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSG 362
++P+ EH+ ++ + G L++A + MP+ D W A+L G
Sbjct: 626 MRHECKIEPTVEHYA-----CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D RT+A + A + + + R IH +I+ G+ + N L+D+Y K + AH
Sbjct: 498 DERTVACVLPACASLSAFDK--GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHN 117
LFD + D+ S T +++ Y G K A LFN D IS+ +++ A SH+
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 172/399 (43%), Gaps = 72/399 (18%)
Query: 9 LFLAQLNHPSATQTLAR--AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKT 66
L A L H Q R +I AH++ G I N +I +Y + AH +FD+
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
R+ +++ MV Y+ + + A++L
Sbjct: 67 SE---------------------------------RNIVTWTTMVSGYTSDGKPNKAIEL 93
Query: 127 FVRM-KRDGFAPDPFSFSTVLGAMSLIAE--------EEWHCQQLHCDVVKWGVMCVPSV 177
+ RM + A + F +S VL A L+ + E + L DVV +
Sbjct: 94 YRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV---------L 144
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
+N+++ Y+ + L+E A F E + + SW T+I+GY + + A
Sbjct: 145 MNSVVDMYV--KNGRLIE-------ANSSFKE--ILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
L M P V+WN +ISG+V G A + +M G+ +D + + A G
Sbjct: 194 TLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGG 252
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF--DKMPVRDLVS 355
L G+QLH V+++ ++ S I +ALI Y+ CG L+ A +VF +K+ V V+
Sbjct: 253 LLTMGKQLHCCVVKSGLESSPFAI----SALIDMYSNCGSLIYAADVFHQEKLAVNSSVA 308
Query: 356 -WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 393
WN++LSG++ E A ++ ++ + +L + +SG
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSG 347
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 182/457 (39%), Gaps = 78/457 (17%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L ++ I R ++ N ++D+Y K+ + A+ F + P S TL+S Y
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYC 184
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD---- 138
AG + A LF+ P + +S+N ++ + A++ VRM+R+G D
Sbjct: 185 KAGLMDEAVTLFHRMPQP--NVVSWNCLISGFVDK-GSPRALEFLVRMQREGLVLDGFAL 241
Query: 139 -------------------------------PFSFSTVLGAMS-----LIAEEEWHCQQL 162
PF+ S ++ S + A + +H ++L
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 163 --HCDVVKWGVMCVPSVLNT--------LLSCYICCASSTLVESPVLMASARKLFDEAPL 212
+ V W M ++N LL Y S +S L + + + L
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIY---QSDLCFDSYTLSGALKICINYVNL 358
Query: 213 SQKDEPSWTTMIAGYVRN--------------DDLASARKLLDGMTHPIAVAWNAMISGY 258
+ +++GY + ++ A KL + + +A++ +I G
Sbjct: 359 RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGC 418
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
V+ G AF FR++ +G+ D++ ++++ + G+Q+H ++ +
Sbjct: 419 VKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 378
AL+ Y KCG++ +FD M RD+VSW I+ G+ R+EEA F +
Sbjct: 479 ----VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHK 534
Query: 379 V----PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ E N +T+ ++S SG EE+ MK
Sbjct: 535 MINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMK 571
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGI 279
+I+ YV L+ A K+ D M+ V W M+SGY G +A + +R+M S
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+E+ Y++++ A G QL V + + + + + N+++ Y K G+L+
Sbjct: 104 AANEFMYSAVLKACGLVGDI----QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLI 159
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
+A F ++ SWN ++SGY A ++EA +F +P+ N+++W +ISG + G
Sbjct: 160 EANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG 218
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + L+ ++ GN++ A KLF+ P +D I+++ +++ + A LF
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPN--KDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+ + G D F S +L S +A W +Q+H +K G P L+ Y+ C
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWG-KQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+++ V+ LFD + ++D SWT +I G+ +N
Sbjct: 493 E---IDNGVV------LFD--GMLERDVVSWTGIIVGFGQN------------------- 522
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAY 308
G EEAF F KM ++GI+ ++ T+ L+SA ++GL R L
Sbjct: 523 ------------GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETM 570
Query: 309 VLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++P EH+ ++ + G +A E+ +KMP+ D W ++L+
Sbjct: 571 KSEYGLEPYLEHYY-----CVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLT 620
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 393
K G+ +QA V + +++ N ++S Y++ R L +A +F E+ ERN++TWT M+SG
Sbjct: 22 KRGESIQAH-VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 394 LAESGFGEESLKLFNQM 410
G ++++L+ +M
Sbjct: 81 YTSDGKPNKAIELYRRM 97
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 59/360 (16%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
H+ D + D F T L+ YS G+V A K+F+ T R +NA+ +A + G
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT--RKRTIYVWNALFRALTLAGHG 159
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
+ L+ +M R G D F+++ VL A CV S
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKA------------------------CVASE--- 192
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS----WTTMIAGYVRNDDLASA 236
C + L++ + A L+++ S TT++ Y R + A
Sbjct: 193 -------CTVNHLMKGKEI---------HAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSLISASF 294
+ GM V+W+AMI+ Y ++G EA TFR+M + + T S++ A
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
+ G+ +H Y+LR + IL V +AL+T Y +CGKL + VFD+M RD+V
Sbjct: 297 SLAALEQGKLIHGYILRRGLDS----ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
SWN+++S Y ++A IF E+ +T+ ++ + G EE +LF M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
+CC + + + + R + D S +D T +I Y + ARK+ D
Sbjct: 85 LCCGHRSSLSDALRVH--RHILDNG--SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK 140
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC---- 301
WNA+ G EE + KM+ +G++ D +TYT ++ A + C
Sbjct: 141 RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS---ECTVNH 197
Query: 302 ---GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
G+++HA++ R S +I++ L+ Y + G + A VF MPVR++VSW+A
Sbjct: 198 LMKGKEIHAHLTRRGYS-SHVYIMTT---LVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 359 ILSGYINARRLEEAKFIFREV 379
+++ Y + EA FRE+
Sbjct: 254 MIACYAKNGKAFEALRTFREM 274
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 163/391 (41%), Gaps = 70/391 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + L+S Y GN+ AE +F + ++ RD ++YN ++ S G A++LF R
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIF--SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M DG PD + ++++ A S + QQLH K G + LL+ Y CA
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTL-FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 190 S---------STLVESPVL---MASARKLFD---------------EAPLSQKDEPS--- 219
T VE+ VL M A L D E +Q PS
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 220 -----------------------------WTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
+ +I Y + L +A +L V+
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W MI+GY ++ ++A TFR+M GI+ DE T+ +SA G+Q+HA
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ L NAL+T Y++CGK+ ++ F++ D ++WNA++SG+ + E
Sbjct: 619 VSGFSSD----LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 371 EAKFIF----REVPERNLLTWTVMISGLAES 397
EA +F RE + N T+ + +E+
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 144/357 (40%), Gaps = 80/357 (22%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IHA IL G R + ++ N LID+Y ++
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYSRN----------------------------- 235
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
G V LA ++F+ + L+D S+ AM+ S N A++LF M G P P++F
Sbjct: 236 --GFVDLARRVFDG--LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAF 291
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S+VL A I E +QLH V+K G V N L+S Y
Sbjct: 292 SSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLG------------- 337
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
+L SA + M+ AV +N +I+G + G
Sbjct: 338 -----------------------------NLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
E+A + F++MH G++ D T SL+ A G G+QLHAY + +
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN---- 424
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+ AL+ Y KC + A + F + V ++V WN +L Y L + IFR++
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 481
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 178/436 (40%), Gaps = 66/436 (15%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARA--IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYA 59
DS T+A+L +A SA TL R +HA+ GF I L+++Y K ++I A
Sbjct: 388 DSNTLASLVVA----CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHN 117
F +T ++ +L AY +++ + ++F + + + +Y +++K
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE--WHC--QQLHCDVVKWGVMC 173
D ++ ++ + F + + S ++ + + + + W + DVV W M
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 174 VP-----------SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK------- 215
+ +L I L + A + L + + +
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 216 -DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
D P ++ Y R + + + +AWNA++SG+ + G EEA F +M
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
+ GI + +T+ S + A+ T G+Q+HA + +T V NALI+ Y K
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE----VCNALISMYAK 739
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
CG + A + F ++ ++ VSWNAI++ Y
Sbjct: 740 CGSISDAEKQFLEVSTKNEVSWNAIINAY------------------------------- 768
Query: 395 AESGFGEESLKLFNQM 410
++ GFG E+L F+QM
Sbjct: 769 SKHGFGSEALDSFDQM 784
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 53/308 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ + L++ YS G ++ + F T D I++NA+V + + + A+++FVR
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAG--DNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R+G + F+F + + A S A + +Q+H + K G V N L+S Y C
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMK-QGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S ++ A K F E +S K+E SW
Sbjct: 742 S---------ISDAEKQFLE--VSTKNEVSW----------------------------- 761
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAY 308
NA+I+ Y +HG EA D+F +M ++ + T ++SA + GL + G +
Sbjct: 762 --NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
Query: 309 VLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINA 366
+ P EH++ ++ T+ G L +A+E +MP++ D + W +LS +
Sbjct: 820 NSEYGLSPKPEHYV-----CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874
Query: 367 RRLEEAKF 374
+ +E +F
Sbjct: 875 KNMEIGEF 882
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 147/388 (37%), Gaps = 112/388 (28%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R +H+ IL G + +L D Y ++ A +FD+ P IF+
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT---------- 153
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAY-SHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+N M+K S NL G LFVRM + P+ +F
Sbjct: 154 -----------------------WNKMIKELASRNLIGEV-FGLFVRMVSENVTPNEGTF 189
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S VL A + +Q+H ++ G+ V N L+ Y + + V+
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY---SRNGFVD------L 240
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR++FD L KD SW MI+G +N+ A A +L
Sbjct: 241 ARRVFD--GLRLKDHSSWVAMISGLSKNECEAEAIRL----------------------- 275
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
F M+ +GI Y ++S++SA G QLH VL+ +
Sbjct: 276 --------FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY--- 324
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
V NAL++ Y G L+ A +F M RD V++N
Sbjct: 325 -VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN------------------------- 358
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQM 410
+I+GL++ G+GE++++LF +M
Sbjct: 359 ------TLINGLSQCGYGEKAMELFKRM 380
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 84/392 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+AIH H++ GF T + N L +Y + + LF+
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN------------------ 269
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
++ RD +S+ +++ AY AV+ F++M+ P+ +F+
Sbjct: 270 ---------------MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFA 314
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++ A + ++ W +QLHC+V+ G+ SV N+++ Y C
Sbjct: 315 SMFSACASLSRLVWG-EQLHCNVLSLGLNDSLSVSNSMMKMYSTCG-------------- 359
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
+L SA L GM ++W+ +I GY + G
Sbjct: 360 ----------------------------NLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 323
EE F F M G + ++ SL+S S N + GRQ+HA L ++ + +
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS----T 447
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
V ++LI Y+KCG + +A +F + D+VS A+++GY + +EA +F + +
Sbjct: 448 VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507
Query: 384 L----LTWTVMISGLAESGFGEESLKLFNQMK 411
+T+ +++ SG + FN M+
Sbjct: 508 FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQ 539
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM--GIQMDEYTYTSL 289
+L +AR++ D M H V+W ++I YV +EA F M + + D + +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+ A + G LHAY ++T + S + V ++L+ Y + GK+ ++ VF +MP
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVY----VGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL--TWTVMI-----SGLAESGFGE 401
R+ V+W AI++G ++A R +E F E+ L T+T I +GL + +G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 61/306 (19%)
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF--VRMKRDGFAPDPFS 141
AGN++ A ++F+ P D +S+ +++K Y + A+ LF +R+ +PD
Sbjct: 53 AGNLRAARQVFDKMPHG--DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 142 FSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
S VL G S IA + + LH VK ++ V ++LL Y +
Sbjct: 111 LSVVLKACGQSSNIA----YGESLHAYAVKTSLLSSVYVGSSLLDMY---------KRVG 157
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
+ + ++F E P RN AV W A+I+G
Sbjct: 158 KIDKSCRVFSEMPF----------------RN-----------------AVTWTAIITGL 184
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQPS 317
V G Y+E F +M D YT+ + A G+ +H +V+ R V
Sbjct: 185 VHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT- 243
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
L V N+L T YT+CG++ +F+ M RD+VSW +++ Y R +E K +
Sbjct: 244 ----LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY--KRIGQEVKAVET 297
Query: 378 EVPERN 383
+ RN
Sbjct: 298 FIKMRN 303
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
R++L++ YS G++K A +F T D +S AM+ Y+ + A+ LF + +
Sbjct: 449 RSSLINMYSKCGSIKEASMIFGETD--RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
GF PD +F +VL A + H QL + +M + Y C L
Sbjct: 507 GFRPDSVTFISVLTACT-------HSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVD--L 557
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH---PIAVA 250
+ ++ A K+ +E +KD+ WTT++ D+ R+ + + A A
Sbjct: 558 LCRAGRLSDAEKMINEMSW-KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATA 616
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+ + Y G EEA + + M + G+
Sbjct: 617 LVTLANIYSSTGNLEEAANVRKNMKAKGV 645
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 48/312 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D T+LL Y GN+ AEK+F+ PV RD ++++ +V + N + A+++F
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSCLENGEVVKALRMF 190
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M DG PD + +V+ C +L C
Sbjct: 191 KCMVDDGVEPDAVTMISVVEG----------CAELGC----------------------- 217
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
+ V RK+FD DE +++ Y + DL S+ ++ + +
Sbjct: 218 ----LRIARSVHGQITRKMFD------LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
AV+W AMIS Y R E+A +F +M GI+ + T S++S+ GL G+ +H
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ +R + P+ S++ AL+ Y +CGKL V + R++V+WN+++S Y +
Sbjct: 328 FAVRRELDPNYE---SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 368 RLEEAKFIFREV 379
+ +A +FR++
Sbjct: 385 MVIQALGLFRQM 396
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 61/331 (18%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+LL+ YS G++ +E++F + ++ +S+ AM+ +Y+ A++ F M + G
Sbjct: 242 SLLTMYSKCGDLLSSERIFE--KIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
P+ + +VL + LI +++ G +
Sbjct: 300 EPNLVTLYSVLSSCGLIG------------LIREG------------------------K 323
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTM----IAGYVRNDDLASARKLLDGMTHPIAVAW 251
S A R+L +P++ ++ + Y L+ +L ++ VAW
Sbjct: 324 SVHGFAVRREL----------DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAW 373
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N++IS Y G+ +A FR+M + I+ D +T S ISA N GL G+Q+H +V+R
Sbjct: 374 NSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
T V S+ F V N+LI Y+K G + A VF+++ R +V+WN++L G+ E
Sbjct: 434 TDV--SDEF---VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 372 A----KFIFREVPERNLLTWTVMISGLAESG 398
A +++ E N +T+ +I + G
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 145/352 (41%), Gaps = 56/352 (15%)
Query: 58 YAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVK--AYS 115
+AH L D T L+ +Y+ G+ + +F A P D+ Y ++K +
Sbjct: 21 HAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP--DSFMYGVLIKCNVWC 78
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
H LD AA+ L+ R+ + F F +VL A + E ++H ++K GV
Sbjct: 79 HLLD--AAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV---- 132
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
D T+++ Y + +L+
Sbjct: 133 --------------------------------------DDDAVIETSLLCMYGQTGNLSD 154
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A K+ DGM VAW+ ++S + +G +A F+ M G++ D T S++
Sbjct: 155 AEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAE 214
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G R +H + R + E ++ N+L+T Y+KCG L+ + +F+K+ ++ VS
Sbjct: 215 LGCLRIARSVHGQITRKMFDLDE----TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 356 WNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEES 403
W A++S Y E+A F E+ E NL+T ++S G E
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG 322
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 188/428 (43%), Gaps = 54/428 (12%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+AR++H I F L + N L+ +Y K ++ + +F+K + S T ++S+Y+
Sbjct: 220 IARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN 279
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR-DGFAP---- 137
+ +EK + ++ I N +V YS L + L K GFA
Sbjct: 280 RG---EFSEKALRSFSEMIKSGIEPN-LVTLYS-VLSSCGLIGLIREGKSVHGFAVRREL 334
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMCVPSVL--NTLLSCYI-------- 186
DP S L + L AE C +L C+ V V+ +++ N+L+S Y
Sbjct: 335 DPNYESLSLALVELYAE----CGKLSDCETV-LRVVSDRNIVAWNSLISLYAHRGMVIQA 389
Query: 187 -----CCASSTLVESPVLMASARKLFDEA---PLSQK-----------DEPSWTTMIAGY 227
+ + +AS+ + A PL ++ DE ++I Y
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMY 449
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
++ + SA + + + H V WN+M+ G+ ++G EA F M+ ++M+E T+
Sbjct: 450 SKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFL 509
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
++I A + G G+ +H ++ + ++ L + ALI Y KCG L A VF
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISGLKD-----LFTDTALIDMYAKCGDLNAAETVFRA 564
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEES 403
M R +VSW+++++ Y R+ A F ++ E N + + ++S SG EE
Sbjct: 565 MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 624
Query: 404 LKLFNQMK 411
FN MK
Sbjct: 625 KYYFNLMK 632
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 148/352 (42%), Gaps = 56/352 (15%)
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
+T D F + +L+ YS +G+V A +FN + R +++N+M+ +S N + A+
Sbjct: 433 RTDVSDEFVQNSLIDMYSKSGSVDSASTVFN--QIKHRSVVTWNSMLCGFSQNGNSVEAI 490
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC 184
LF M + +F V+ A S I E KW
Sbjct: 491 SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG---------KW--------------- 526
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
V ++++ + LF + T +I Y + DL +A + M+
Sbjct: 527 ---------VHHKLIISGLKDLFTD-----------TALIDMYAKCGDLNAAETVFRAMS 566
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
V+W++MI+ Y HG A TF +M G + +E + +++SA ++G G+
Sbjct: 567 SRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKY 626
Query: 305 LHAYVLRTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSG 362
+ V P SEHF I ++ G L +A +MP + D W ++++G
Sbjct: 627 YFNLMKSFGVSPNSEHFA-----CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Query: 363 YINARRLEEAKFI---FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++++ K I ++ + +T++ + AE G EE +L + MK
Sbjct: 682 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMK 733
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 163/345 (47%), Gaps = 51/345 (14%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ R+ LLS Y+ G ++ A F++ + RD +S+NAM+ Y+ N + LF
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDS--MKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M +G PD F+F ++L A S++ + +LH +K G +++ +L++ Y+ C
Sbjct: 205 MLTEGKKPDCFTFGSLLRA-SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S +A+A KL + ++D S T +I G+ + ++ S
Sbjct: 264 S---------LANAWKLHEGTK--KRDLLSCTALITGFSQQNNCTS-------------- 298
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+AFD F+ M M +MDE +S++ GRQ+H +
Sbjct: 299 ----------------DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFA 342
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L++ F +++ N+LI Y K G++ A F++M +D+ SW ++++GY
Sbjct: 343 LKS---SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNF 399
Query: 370 EEAKFIFREVP-ER---NLLTWTVMISGLAESGFGEESLKLFNQM 410
E+A ++ + ER N +T+ ++S + +G E K+++ M
Sbjct: 400 EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTM 444
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 4/141 (2%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I Y++ D+ ARKL D ++ V+W AMIS + R G + +A F++MH ++ +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
++TY S++ + + G G Q+H V + + L V +AL++ Y +CGK+ +AR
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGN----LIVRSALLSLYARCGKMEEAR 168
Query: 343 EVFDKMPVRDLVSWNAILSGY 363
FD M RDLVSWNA++ GY
Sbjct: 169 LQFDSMKERDLVSWNAMIDGY 189
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 143/354 (40%), Gaps = 81/354 (22%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH + +T GF +++ LID+Y K G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQ-------------------------------GD 62
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
VK A KLF+ ++ RD +S+ AM+ +S A+ LF M R+ + F++ +VL
Sbjct: 63 VKHARKLFD--RISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 120
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ C+ L C +K G+ SV CA + +V S +L
Sbjct: 121 KS----------CKDLGC--LKEGMQIHGSVEKG------NCAGNLIVRSALL------- 155
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
+ Y R + AR D M V+WNAMI GY + +
Sbjct: 156 ------------------SLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADT 197
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
+F F+ M + G + D +T+ SL+ AS +LH ++ S I S+ N
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF-IFREV 379
A Y KCG L A ++ + RDL+S A+++G+ F IF+++
Sbjct: 258 A----YVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 54/364 (14%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVK 112
S+ + H+ + D F R +L+S YS++G A +LF+ +D +++ AM+
Sbjct: 120 SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED--KDVVTWTAMID 177
Query: 113 AYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWG-V 171
+ N A+ FV MK+ G A + + +VL A + E+ + +H ++ G V
Sbjct: 178 GFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKV-EDVRFGRSVHGLYLETGRV 236
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
C + ++L+ Y C+ A+K+FDE P RN
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYD---------DAQKVFDEMP----------------SRN- 270
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
V W A+I+GYV+ +++ F +M + +E T +S++S
Sbjct: 271 ----------------VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A + G + GR++H Y+++ ++ + + LI Y KCG L +A VF+++ +
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINT----TAGTTLIDLYVKCGCLEEAILVFERLHEK 370
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLF 407
++ +W A+++G+ +A +F + N +T+ ++S A G EE +LF
Sbjct: 371 NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 408 NQMK 411
MK
Sbjct: 431 LSMK 434
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 47/250 (18%)
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+R+G P +F +L A+ + + Q H +VK+G+ P V N+L+S Y
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRDSNPF--QFHAHIVKFGLDSDPFVRNSLISGY---- 148
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S+ LFD A +L DG V
Sbjct: 149 ------------SSSGLFD--------------------------FASRLFDGAEDKDVV 170
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W AMI G+VR+G EA F +M G+ +E T S++ A+ GR +H
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L T + FI ++L+ Y KC A++VFD+MP R++V+W A+++GY+ +R
Sbjct: 231 LETGRVKCDVFI---GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 370 EEAKFIFREV 379
++ +F E+
Sbjct: 288 DKGMLVFEEM 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 151/349 (43%), Gaps = 58/349 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F ++L+ Y A+K+F+ P R+ +++ A++ Y + + +F
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPS--RNVVTWTALIAGYVQSRCFDKGMLVFEE 296
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M + AP+ + S+VL A + + +++HC ++K + +NT
Sbjct: 297 MLKSDVAPNEKTLSSVLSACAHVGALH-RGRRVHCYMIKNSIE-----INT--------- 341
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ TT+I YV+ L A + + +
Sbjct: 342 ----------------------------TAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W AMI+G+ HG +AFD F M S + +E T+ +++SA + GL GR+L +
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 310 L-RTVVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-VSWNAILSGYINA 366
R ++P ++H+ ++ + + G L +A+ + ++MP+ V W A+ +
Sbjct: 434 KGRFNMEPKADHYA-----CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
Query: 367 RRLEEAKF----IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ E K+ + + P + +T++ + +ES +E ++ QMK
Sbjct: 489 KDYELGKYAASRVIKLQPSHS-GRYTLLANLYSESQNWDEVARVRKQMK 536
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 65/378 (17%)
Query: 38 LTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNAT 97
L+ L+ + ++CK+ + Y + D+F +++L+ Y G + AE LF
Sbjct: 127 LSGLVLEKGEAVWCKAVDFGYKN---------DVFVCSSVLNLYMKCGKMDEAEVLFG-- 175
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
+ RD I + MV ++ AV+ + M+ +GF D +L A + + +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+ +H + + G+ P++ E
Sbjct: 236 G-RSVHGYLYRTGL---------------------------------------PMNVVVE 255
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
S M Y + + A ++ M AV+W ++ISG+ ++GL +AF+ +M S+
Sbjct: 256 TSLVDM---YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSL 312
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN-NALITFYTKCG 336
G Q D T ++ A G GR +H Y+L+ H + V AL+ Y+KCG
Sbjct: 313 GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK------RHVLDRVTATALMDMYSKCG 366
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMIS 392
L +RE+F+ + +DLV WN ++S Y +E +F ++ E N+ T+ ++S
Sbjct: 367 ALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLS 426
Query: 393 GLAESGFGEESLKLFNQM 410
L+ SG E+ F+ M
Sbjct: 427 ALSHSGLVEQGQHWFSVM 444
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 146/328 (44%), Gaps = 55/328 (16%)
Query: 60 HHLFDKTPNP-DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNL 118
H +T P ++ T+L+ Y+ G +++A ++F + + + +S+ +++ ++ N
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF--SRMMFKTAVSWGSLISGFAQNG 297
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
+ A + V M+ GF PD + VL A S + +K G
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS------------LKTG-------- 337
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
L+ CYI ++ VL D + T ++ Y + L+S+R+
Sbjct: 338 -RLVHCYI-------LKRHVL----------------DRVTATALMDMYSKCGALSSSRE 373
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+ + + V WN MIS Y HG +E F KM I+ D T+ SL+SA ++GL
Sbjct: 374 IFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGL 433
Query: 299 FNCGRQLHAYVL-RTVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVS 355
G+ + ++ + +QPSE H++ LI + G++ +A ++ + + + L
Sbjct: 434 VEQGQHWFSVMINKYKIQPSEKHYV-----CLIDLLARAGRVEEALDMINSEKLDNALPI 488
Query: 356 WNAILSGYINARRLEEAKFIFREVPERN 383
W A+LSG IN R L ++ + N
Sbjct: 489 WVALLSGCINHRNLSVGDIAANKILQLN 516
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+IA R +++ ARK+ D + +N+MI Y R +E + +M + IQ D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
T+T I A + + G + + ++ F+ S +++ Y KCGK+ +A
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKNDVFVCS---SVLNLYMKCGKMDEAE 171
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 397
+F KM RD++ W +++G+ A + +A +RE+ V++ GL ++
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQA 226
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + T L+ YS G + + ++F V +D + +N M+ Y + +G V LF++
Sbjct: 351 DRVTATALMDMYSKCGALSSSREIFE--HVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWG-----VMCVPSVLNTLLSC 184
M PD +F+++L A+S H +V+ G VM +
Sbjct: 409 MTESNIEPDHATFASLLSALS------------HSGLVEQGQHWFSVMINKYKIQPSEKH 456
Query: 185 YIC----CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA----SA 236
Y+C A + VE + M ++ KL + P+ W +++G + + +L+ +A
Sbjct: 457 YVCLIDLLARAGRVEEALDMINSEKLDNALPI-------WVALLSGCINHRNLSVGDIAA 509
Query: 237 RKLLDGMTHPIAVAWNAMISGY 258
K+L +P ++ ++S +
Sbjct: 510 NKILQ--LNPDSIGIQTLVSNF 529
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 28/251 (11%)
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
D+V W NT++S YI + M AR LFD+ P +D SW T++
Sbjct: 89 DIVLW---------NTMISGYIEMGN---------MLEARSLFDQMPC--RDVMSWNTVL 128
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDE 283
GY D+ + ++ D M +WN +I GY ++G E +F++M G + ++
Sbjct: 129 EGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND 188
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
T T ++SA G F+ G+ +H Y + ++V NALI Y KCG + A E
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD---VNVKNALIDMYGKCGAIEIAME 245
Query: 344 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGF 399
VF + RDL+SWN +++G EA +F E+ + +T+ ++ G
Sbjct: 246 VFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGL 305
Query: 400 GEESLKLFNQM 410
E+ L FN M
Sbjct: 306 VEDGLAYFNSM 316
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 138/335 (41%), Gaps = 59/335 (17%)
Query: 36 FRLTP----LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAE 91
F L+P ++ N +I Y + N+ A LFD+ P D+ S T+L Y+ G+++ E
Sbjct: 82 FDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACE 141
Query: 92 KLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLGAMS 150
++F+ P R+ S+N ++K Y+ N + F RM +G P+ + + VL A
Sbjct: 142 RVFDDMPE--RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSA-- 197
Query: 151 LIAEEEWHCQQLHC-DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDE 209
C +L D KW K +
Sbjct: 198 --------CAKLGAFDFGKW---------------------------------VHKYGET 216
Query: 210 APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 269
++ D +I Y + + A ++ G+ ++WN MI+G HG EA +
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALN 276
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR--TVVQPSEHFILSVNNA 327
F +M + GI D+ T+ ++ A + GL G + +++ EH
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHC-----GC 331
Query: 328 LITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++ ++ G L QA E +KMPV+ D V W +L
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 44/220 (20%)
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
++L +S +L+A +R+L A S + + + +ASA K+ M V
Sbjct: 3 TSLRDSSLLVAESRELITHAKCST-ESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVL 61
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W +MI+GY+ N L + R
Sbjct: 62 WTSMINGYL----------------------------------LNKDLVSARRYFD---- 83
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ P +L N +I+ Y + G +++AR +FD+MP RD++SWN +L GY N +E
Sbjct: 84 ---LSPERDIVLW--NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDME 138
Query: 371 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +F ++PERN+ +W +I G A++G E L F +M
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 49/310 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI L++ Y G+VK A LF+ P RD IS+NAM+ Y N H ++LF
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMP--RRDIISWNAMISGYFENGMCHEGLELFFA 287
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ PD + ++V+ A L+ + + +H V+ G SV N+L Y+
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLG-RDIHAYVITTGFAVDISVCNSLTQMYL--- 343
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ SW A KL M V
Sbjct: 344 --------------------------NAGSWR-------------EAEKLFSRMERKDIV 364
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+W MISGY + L ++A DT+R M ++ DE T +++SA G + G +LH
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
++ + +++ NN LI Y+KC + +A ++F +P ++++SW +I++G R
Sbjct: 425 IKARLIS---YVIVANN-LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480
Query: 370 EEAKFIFREV 379
EA R++
Sbjct: 481 FEALIFLRQM 490
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 50/290 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RD 133
L+ + GN+ A +F ++ R+ S+N +V Y+ A+ L+ RM
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFG--KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G PD ++F VL I + +++H VV++G V+N L
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLA-RGKEVHVHVVRYGYELDIDVVNAL------------ 237
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
I YV+ D+ SAR L D M ++WNA
Sbjct: 238 ------------------------------ITMYVKCGDVKSARLLFDRMPRRDIISWNA 267
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
MISGY +G+ E + F M + + D T TS+ISA G GR +HAYV+ T
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+SV N+L Y G +A ++F +M +D+VSW ++SGY
Sbjct: 328 FAVD----ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 9/174 (5%)
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMD 282
+A +VR +L A + M+ +WN ++ GY + G ++EA + +M +G ++ D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
YT+ ++ G+++H +V+R + + V NALIT Y KCG + AR
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD----IDVVNALITMYVKCGDVKSAR 251
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMIS 392
+FD+MP RD++SWNA++SGY E +F + + +L+T T +IS
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 185/462 (40%), Gaps = 125/462 (27%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP---------------- 67
+ +H H++ G+ L + N LI +Y K ++ A LFD+ P
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 68 -------------------NPDIFSRTTLLSA---------------------------- 80
+PD+ + T+++SA
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 81 -------YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
Y AG+ + AEKLF + + +D +S+ M+ Y +N A+ + M +D
Sbjct: 335 CNSLTQMYLNAGSWREAEKLF--SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
PD + + VL A + + + + + LH +K ++ V N L++ Y C
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVE-LHKLAIKARLISYVIVANNLINMYSKCKC--- 448
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ A +F P +K+ SWT++IAG N+ + A
Sbjct: 449 ------IDKALDIFHNIP--RKNVISWTSIIAGLRLNNR-----------------CFEA 483
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+I F + M +Q + T T+ ++A G CG+++HA+VLRT
Sbjct: 484 LI---------------FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
V + + NAL+ Y +CG++ A F+ +D+ SWN +L+GY +
Sbjct: 529 VGLDDF----LPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVV 583
Query: 374 FIF-REVPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F R V R + +T+ ++ G ++S + L F++M+
Sbjct: 584 ELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME 625
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
+ G +G EEA M + + +DE + +L+ G ++++ L ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ + NA + + + G LV A VF KM R+L SWN ++ GY +EA
Sbjct: 126 SLG----VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181
Query: 375 IF 376
++
Sbjct: 182 LY 183
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 142/341 (41%), Gaps = 88/341 (25%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
A+ +HA ++ + I +L+++YC N+ A H FD N
Sbjct: 70 AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQN--------------- 114
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF-VRMKRDGFAPDPFSF 142
RD ++N M+ Y + ++ F + M G PD +F
Sbjct: 115 ------------------RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTF 156
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+VL A + + ++HC +K+G M V +L+ Y + +
Sbjct: 157 PSVLKACRTVIDG----NKIHCLALKFGFMWDVYVAASLIHLY---------SRYKAVGN 203
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR LFDE P+ D+ S WNAMISGY + G
Sbjct: 204 ARILFDEMPVR------------------DMGS---------------WNAMISGYCQSG 230
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+EA + +M D T SL+SA G FN G +H+Y ++ ++ SE F
Sbjct: 231 NAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE-SELF-- 283
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
V+N LI Y + G+L ++VFD+M VRDL+SWN+I+ Y
Sbjct: 284 -VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 75/434 (17%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH L GF + LI +Y + + A LFD+ P D+ S ++S Y +GN
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
K A L N + D+++ +++ A + D + V + + G + F + ++
Sbjct: 232 AKEALTLSNG--LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 147 GAMSLIAEEEWHCQQLHC-----DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+ CQ++ D++ W N+++ Y L E P+
Sbjct: 290 DLYAEFGRLR-DCQKVFDRMYVRDLISW---------NSIIKAY------ELNEQPL--- 330
Query: 202 SARKLFDEAPLSQKDEPSWTTMIA--------GYVRN---------------DDLA---- 234
A LF E LS + +P T+I+ G +R +D+
Sbjct: 331 RAISLFQEMRLS-RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 235 ------------SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQM 281
SAR + + + + ++WN +ISGY ++G EA + + M G I
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
++ T+ S++ A G G +LH +L+ + + + V +L Y KCG+L A
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL----YLDVFVVTSLADMYGKCGRLEDA 505
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAES 397
+F ++P + V WN +++ + E+A +F+E+ + + +T+ ++S + S
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 398 GFGEESLKLFNQMK 411
G +E F M+
Sbjct: 566 GLVDEGQWCFEMMQ 579
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK-MHSMGIQMDEYT 285
Y ++A AR D + + AWN MISGY R G E F M S G+ D T
Sbjct: 96 YCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRT 155
Query: 286 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
+ S++ A G ++H L+ + + V +LI Y++ + AR +F
Sbjct: 156 FPSVLKACRTV---IDGNKIHCLALKFGFM----WDVYVAASLIHLYSRYKAVGNARILF 208
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 398
D+MPVRD+ SWNA++SGY + +EA + + + +T ++S E+G
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG 261
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 169/447 (37%), Gaps = 149/447 (33%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH T+GF + N ++ +Y K+ A +F+ +PD+ S T+LS +
Sbjct: 98 IHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD---- 153
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
D A+ VRMK G D F++ST L
Sbjct: 154 --------------------------------DNQIALNFVVRMKSAGVVFDAFTYSTAL 181
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ + +E QL VVK G+ ES +++ +
Sbjct: 182 -SFCVGSEGFLLGLQLQSTVVKTGL-----------------------ESDLVVGN---- 213
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE- 265
S+ TM Y R+ AR++ D M+ ++WN+++SG + G +
Sbjct: 214 ------------SFITM---YSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
EA FR M G+++D ++TS+I+ + RQ+H ++ + +L V
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES----LLEVG 314
Query: 326 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS------------------------ 361
N L++ Y+KCG L + VF +M R++VSW ++S
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 362 --GYINARRLEE---------------------------------------AKFIFREVP 380
G INA + E AK F ++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLF 407
R +++W MISG A++GF E+LK+F
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMF 461
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 177/403 (43%), Gaps = 71/403 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFV 128
D+ + ++ YS +G+ + A ++F+ ++ +D IS+N+++ S G AV +F
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFD--EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M R+G D SF++V+ + E + +Q+H +K G + V N L+S Y
Sbjct: 266 DMMREGVELDHVSFTSVI--TTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSK 323
Query: 188 CASSTLVESPVLMASARKLFDEAPL--SQKD----------------------------- 216
C V+S S R + + S KD
Sbjct: 324 CGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVK 383
Query: 217 ----------------------EPS-WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
EPS + I Y + + L A+K + +T ++WNA
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-SFNTGL-FNCGRQLHAYVLR 311
MISG+ ++G EA F + + +EYT+ S+++A +F + G++ HA++L+
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
+ V++AL+ Y K G + ++ +VF++M ++ W +I+S Y + E
Sbjct: 503 LGLNSCP----VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 372 AKFIFREVPERN----LLTWTVMISGLAESGFGEESLKLFNQM 410
+F ++ + N L+T+ +++ G ++ ++FN M
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y + +A + + + P V+WN ++SG+ + + A + +M S G+ D +TY
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTY 177
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
++ +S + F G QL + V++T ++ L V N+ IT Y++ G AR VFD
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESD----LVVGNSFITMYSRSGSFRGARRVFD 233
Query: 347 KMPVRDLVSWNAILSGYINARRLE-EAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 405
+M +D++SWN++LSG EA IFR++ + V + + + E LK
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 406 LFNQM 410
L Q+
Sbjct: 294 LARQI 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 132/345 (38%), Gaps = 86/345 (24%)
Query: 10 FLAQLNHPSATQTLARA--IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
F+ +N + + IH + TGF P + N I +Y K + A F+
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE--- 431
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+T R+ IS+NAM+ ++ N H A+K+F
Sbjct: 432 ------------------------------DITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAE-EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
+ + P+ ++F +VL A++ + Q+ H ++K G+ P V + LL Y
Sbjct: 462 LSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMY- 519
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
+ ++ + K+ + M+
Sbjct: 520 -----------------------------------------AKRGNIDESEKVFNEMSQK 538
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
W ++IS Y HG +E + F KM + D T+ S+++A G+ + G ++
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIF 598
Query: 307 AYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
++ ++PS EH+ + ++ + G+L +A E+ ++P
Sbjct: 599 NMMIEVYNLEPSHEHY-----SCMVDMLGRAGRLKEAEELMSEVP 638
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 47/277 (16%)
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
+N+M++ YS++ + A+ + M R G++PD F+F VL A S + + ++ +H V
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG-SCVHGFV 133
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG 226
VK G V LL Y+CC ++F+ D P W
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNY---------GLRVFE-------DIPQWNV---- 173
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
VAW ++ISG+V + + +A + FR+M S G++ +E
Sbjct: 174 ----------------------VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIM 211
Query: 287 TSLISASFNTGLFNCGRQLHAYV----LRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
L+ A G+ H ++ Q F + + +LI Y KCG L AR
Sbjct: 212 VDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTAR 271
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+FD MP R LVSWN+I++GY EEA +F ++
Sbjct: 272 YLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM 308
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 9/196 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T++I Y + DL +AR L DGM V+WN++I+GY ++G EEA F M +GI
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D+ T+ S+I AS G G+ +HAYV +T + AL+ Y K G
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC----ALVNMYAKTGDAES 370
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLA 395
A++ F+ + +D ++W ++ G + EA IF+ + E+ + +T+ ++ +
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 396 ESGFGEESLKLFNQMK 411
G EE + F +M+
Sbjct: 431 HIGLVEEGQRYFAEMR 446
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 54/292 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T+L+ Y+ G+++ A LF+ P R +S+N+++ YS N D A+ +F+ M G
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPE--RTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG 312
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
APD +F +V+ A S+I Q +H V K G + +++ L++ Y A +
Sbjct: 313 IAPDKVTFLSVIRA-SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY---AKTGDA 368
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
E SA+K F++ L +KD +WT +I G LAS
Sbjct: 369 E------SAKKAFED--LEKKDTIAWTVVIIG------LAS------------------- 395
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYV--LR 311
HG EA F++M G D TY ++ A + GL G++ A + L
Sbjct: 396 ------HGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH 449
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 362
+ EH+ ++ ++ G+ +A + MPV+ V+ W A+L+G
Sbjct: 450 GLEPTVEHY-----GCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 5/168 (2%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+L+ AR + + + P WN+MI GY ++A +++M G D +T+ ++
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A G +H +V++T + + + V+ L+ Y CG++ VF+ +P
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVN----MYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNL-LTWTVMISGLAESG 398
++V+W +++SG++N R +A FRE+ + T+M+ L G
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACG 219
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 158/372 (42%), Gaps = 35/372 (9%)
Query: 14 LNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
L + S + A +L+T + + + +C SS + FD P + +
Sbjct: 72 LRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE-----FDSVLVPKLVT 126
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+ + A + ++ + P +N ++ +Y N +V ++ RM
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLP--------WNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC--YICCASS 191
G D F++ +V+ A + + + +G + S+ + C Y+C A
Sbjct: 179 GIRADEFTYPSVIKACAALLD------------FAYGRVVHGSIEVSSHRCNLYVCNALI 226
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPI 247
++ + + AR+LFD +S++D SW +I Y + L A KLLD M
Sbjct: 227 SMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V WN + G + G Y A + M + +++ + + A + G G+ H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
V+R+ H I +V N+LIT Y++C L A VF ++ L +WN+I+SG+
Sbjct: 345 LVIRSC--SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 368 RLEEAKFIFREV 379
R EE F+ +E+
Sbjct: 403 RSEETSFLLKEM 414
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
HP+ WN +I Y+R+ ++E+ +++M S GI+ DE+TY S+I A F GR
Sbjct: 148 HPLP--WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H ++ S L V NALI+ Y + GK+ AR +FD+M RD VSWNAI++ Y
Sbjct: 206 VHG----SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 365 NARRLEEA----KFIFREVPERNLLTWTVMISGLAESG 398
+ +L EA ++ E +++TW + G E+G
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 37/357 (10%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+++ L+S Y G V +A +LF+ ++ RD +S+NA++ Y+ A KL R
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV------VKWGVMCVPSVLNTLLS 183
M G +++T+ G E + L+C V V+ G + +++N L +
Sbjct: 276 MYLSGVEASIVTWNTIAGG---CLEAGNYIGALNCVVGMRNCNVRIGSV---AMINGLKA 329
Query: 184 CYICCASSTLVESPVLMASARKLFD-----EAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
C S + K+F S + ++I Y R DL A
Sbjct: 330 C-----------SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+ + WN++ISG+ + EE ++M G + T S++ G
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
G++ H Y+LR + S L + N+L+ Y K G+++ A+ VFD M RD V++ +
Sbjct: 439 LQHGKEFHCYILR---RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 359 ILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
++ GY + E A F+++ + +T ++S + S E LF +M+
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 116/281 (41%), Gaps = 57/281 (20%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
R +L++ YS +++ A +F T +N+++ +++N L M
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLST--WNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
GF P+ + +++L + + + H ++ HC +++ + C I
Sbjct: 418 GFHPNHITLASILPLFARVGNLQ-HGKEFHCYILR---------RQSYKDCLIL------ 461
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
W +++ Y ++ ++ +A+++ D M V + +
Sbjct: 462 --------------------------WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-----HAY 308
+I GY R G E A F+ M GI+ D T +++SA ++ L G L H +
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+R + EH+ + ++ Y + G L +AR++F +P
Sbjct: 556 GIRLRL---EHY-----SCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 158/372 (42%), Gaps = 35/372 (9%)
Query: 14 LNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
L + S + A +L+T + + + +C SS + FD P + +
Sbjct: 72 LRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE-----FDSVLVPKLVT 126
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+ + A + ++ + P +N ++ +Y N +V ++ RM
Sbjct: 127 FYSAFNLLDEAQTITENSEILHPLP--------WNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC--YICCASS 191
G D F++ +V+ A + + + +G + S+ + C Y+C A
Sbjct: 179 GIRADEFTYPSVIKACAALLD------------FAYGRVVHGSIEVSSHRCNLYVCNALI 226
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPI 247
++ + + AR+LFD +S++D SW +I Y + L A KLLD M
Sbjct: 227 SMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V WN + G + G Y A + M + +++ + + A + G G+ H
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
V+R+ H I +V N+LIT Y++C L A VF ++ L +WN+I+SG+
Sbjct: 345 LVIRSC--SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 368 RLEEAKFIFREV 379
R EE F+ +E+
Sbjct: 403 RSEETSFLLKEM 414
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
HP+ WN +I Y+R+ ++E+ +++M S GI+ DE+TY S+I A F GR
Sbjct: 148 HPLP--WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H ++ S L V NALI+ Y + GK+ AR +FD+M RD VSWNAI++ Y
Sbjct: 206 VHG----SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 365 NARRLEEA----KFIFREVPERNLLTWTVMISGLAESG 398
+ +L EA ++ E +++TW + G E+G
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 37/357 (10%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+++ L+S Y G V +A +LF+ ++ RD +S+NA++ Y+ A KL R
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV------VKWGVMCVPSVLNTLLS 183
M G +++T+ G E + L+C V V+ G + +++N L +
Sbjct: 276 MYLSGVEASIVTWNTIAGG---CLEAGNYIGALNCVVGMRNCNVRIGSV---AMINGLKA 329
Query: 184 CYICCASSTLVESPVLMASARKLFD-----EAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
C S + K+F S + ++I Y R DL A
Sbjct: 330 C-----------SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFI 378
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+ + WN++ISG+ + EE ++M G + T S++ G
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
G++ H Y+LR + S L + N+L+ Y K G+++ A+ VFD M RD V++ +
Sbjct: 439 LQHGKEFHCYILR---RQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 359 ILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
++ GY + E A F+++ + +T ++S + S E LF +M+
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKME 552
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 116/281 (41%), Gaps = 57/281 (20%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
R +L++ YS +++ A +F T +N+++ +++N L M
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLST--WNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
GF P+ + +++L + + + H ++ HC +++ + C I
Sbjct: 418 GFHPNHITLASILPLFARVGNLQ-HGKEFHCYILR---------RQSYKDCLIL------ 461
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
W +++ Y ++ ++ +A+++ D M V + +
Sbjct: 462 --------------------------WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTS 495
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-----HAY 308
+I GY R G E A F+ M GI+ D T +++SA ++ L G L H +
Sbjct: 496 LIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVF 555
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+R + EH+ + ++ Y + G L +AR++F +P
Sbjct: 556 GIRLRL---EHY-----SCMVDLYCRAGYLDKARDIFHTIP 588
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 164/395 (41%), Gaps = 92/395 (23%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKS------SNIPYAHHLFDKTPNPDIFSRTTLL 78
R IHA + G L + L+ + K+ + YA+ + D++ P +F+ +++
Sbjct: 23 RQIHAKLYVDG----TLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
A+ + + EK F+ R +S +K ++ ++ +RM+ G
Sbjct: 79 RAHCKS---PVPEKSFD----FYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL--- 128
Query: 139 PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY--ICCASSTLVES 196
Q+H ++ G P V L+S Y + C
Sbjct: 129 ----------------------QVHGMTIRRGFDNDPHVQTGLISLYAELGC-------- 158
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
+ S K+F+ P D T M+ R D+ ARKL +GM +AWNAMIS
Sbjct: 159 ---LDSCHKVFNSIPCP--DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMIS 213
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
GY + G EA + F M G++++ S++SA G + GR H+Y+ R ++
Sbjct: 214 GYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIK- 272
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ + L+ Y KCG + +A EVF W
Sbjct: 273 ---ITVRLATTLVDLYAKCGDMEKAMEVF----------WG------------------- 300
Query: 377 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ E+N+ TW+ ++GLA +GFGE+ L+LF+ MK
Sbjct: 301 --MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMK 333
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 149/366 (40%), Gaps = 57/366 (15%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
FL Q + +H + GF P ++ LI +Y + + H +F+ P P
Sbjct: 113 FLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP 172
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D RT +++A + G+V A KLF P RD I++NAM+ Y+ + A+ +F
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPE--RDPIAWNAMISGYAQVGESREALNVFHL 230
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC-DVVKWGVMCVPSVLNTLLSCYICC 188
M+ +G + + +VL A C QL D +W
Sbjct: 231 MQLEGVKVNGVAMISVLSA----------CTQLGALDQGRW------------------- 261
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ + +E + + R TT++ Y + D+ A ++ GM
Sbjct: 262 -AHSYIERNKIKITVRLA--------------TTLVDLYAKCGDMEKAMEVFWGMEEKNV 306
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
W++ ++G +G E+ + F M G+ + T+ S++ G + G Q H
Sbjct: 307 YTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFD 365
Query: 309 VLRTV--VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYI 364
+R ++P EH+ L+ Y + G+L A + +MP++ + W+++L
Sbjct: 366 SMRNEFGIEPQLEHY-----GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASR 420
Query: 365 NARRLE 370
+ LE
Sbjct: 421 MYKNLE 426
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 56/354 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
DIF + L+ YS G ++ A K+F+ P R+ +S+ +M++ Y N + AV LF
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNGNALDAVSLF 165
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAE-----EEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
+ D D F +G +S+I+ + + +H V+K G SV NTLL
Sbjct: 166 KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLL 225
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
Y + A ARK+FD+ + KD
Sbjct: 226 DAYAKGGEGGV-------AVARKIFDQ--IVDKDR------------------------- 251
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNC 301
V++N+++S Y + G+ EAF+ FR++ + + + T ++++ A ++G
Sbjct: 252 ------VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G+ +H V+R ++ + V ++I Y KCG++ AR+ FD+M +++ SW A+++
Sbjct: 306 GKCIHDQVIRMGLEDD----VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 362 GYI----NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
GY A+ LE + N +T+ +++ + +G E + FN MK
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMK 415
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 151/365 (41%), Gaps = 85/365 (23%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+DS + ++ A P+ + L +IH+ ++ GF + N L+D Y K
Sbjct: 181 LDSMGLVSVISACSRVPA--KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE----- 233
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
G V +A K+F+ + +D +SYN+++ Y+ +
Sbjct: 234 ------------------------GGVAVARKIFD--QIVDKDRVSYNSIMSVYAQSGMS 267
Query: 121 HAAVKLFVRMKRDGFAP-DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
+ A ++F R+ ++ + + STVL A+S H ++ G V+
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVS------------HSGALRIGKCIHDQVIR 315
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
L E V++ T++I Y + + +ARK
Sbjct: 316 MGL------------EDDVIVG-------------------TSIIDMYCKCGRVETARKA 344
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D M + +W AMI+GY HG +A + F M G++ + T+ S+++A + GL
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 300 NCG-RQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSW 356
G R +A R V+P EH+ ++ + G L +A ++ +M ++ D + W
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEHY-----GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 357 NAILS 361
+++L+
Sbjct: 460 SSLLA 464
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN--CGRQLHA 307
+WN++I+ R G EA F M + + ++ I A + LF+ G+Q H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC--SSLFDIFSGKQTHQ 100
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
Q + V++ALI Y+ CGKL AR+VFD++P R++VSW +++ GY
Sbjct: 101 QAFVFGYQSD----IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 162/380 (42%), Gaps = 88/380 (23%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F ++L Y G + A K+F+ P R+ +++NA++ Y N A++LF M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPD--RNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
++ G P + ST L A + + E +Q H + G M + ++L T L + C
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVE-EGKQSHAIAIVNG-MELDNILGTSLLNFYCKVG 323
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
L+ A +FD + +KD V
Sbjct: 324 --------LIEYAEMVFDR--MFEKD-------------------------------VVT 342
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN +ISGYV+ GL E+A + M ++ D T +L+SA+ T G+++ Y +
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR--- 367
R + + + + ++ Y KCG +V A++VFD +DL+ WN +L+ Y +
Sbjct: 403 RHSFESD----IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSG 458
Query: 368 --------------------------------RLEEAKFIFREVPER----NLLTWTVMI 391
+++EAK +F ++ NL++WT M+
Sbjct: 459 EALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMM 518
Query: 392 SGLAESGFGEESLKLFNQMK 411
+G+ ++G EE++ +M+
Sbjct: 519 NGMVQNGCSEEAILFLRKMQ 538
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 179/404 (44%), Gaps = 47/404 (11%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNV 87
HA + G L ++ L++ YCK I YA +FD+ D+ + ++S Y G V
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 88 KLA---------EKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPD 138
+ A EKL VTL +S A + NL V+ + R F D
Sbjct: 357 EDAIYMCQLMRLEKL-KYDCVTLATLMS----AAARTENLKLGKEVQCYC--IRHSFESD 409
Query: 139 PFSFSTVLG----AMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
STV+ S++ ++ + D++ W NTLL+ Y A S L
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW---------NTLLAAY---AESGLS 457
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVA 250
+ + +L P + +W +I +RN + A+ + M P ++
Sbjct: 458 GEALRLFYGMQLEGVPP----NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLIS 513
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W M++G V++G EEA RKM G++ + ++ T +SA + + GR +H Y++
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
R + S ++S+ +L+ Y KCG + +A +VF +L NA++S Y L+
Sbjct: 574 RNLQHSS---LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLK 630
Query: 371 EAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
EA ++R + L +T T ++S +G +++++F +
Sbjct: 631 EAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI 674
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 164/394 (41%), Gaps = 86/394 (21%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
R +H +++ +G + + L D+Y K + A +FD+ P+
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD-------------- 236
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
R+ +++NA++ Y N A++LF M++ G P +
Sbjct: 237 -------------------RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
ST L A + + E +Q H + G M + ++L T L + C L+
Sbjct: 278 STCLSASANMGGVE-EGKQSHAIAIVNG-MELDNILGTSLLNFYCKVG--------LIEY 327
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A +FD + +KD +W +I SGYV+ G
Sbjct: 328 AEMVFDR--MFEKDVVTWNLII-------------------------------SGYVQQG 354
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
L E+A + M ++ D T +L+SA+ T G+++ Y +R + +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD----I 410
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF-----R 377
+ + ++ Y KCG +V A++VFD +DL+ WN +L+ Y + EA +F
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 470
Query: 378 EVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
VP N++TW ++I L +G +E+ +F QM+
Sbjct: 471 GVPP-NVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 154/349 (44%), Gaps = 54/349 (15%)
Query: 68 NPDIFSR-----TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
N D ++R T L+ Y+ +++AE LF + + +R+ S+ A++
Sbjct: 99 NGDFYARNEYIETKLVIFYAKCDALEIAEVLF--SKLRVRNVFSWAAIIGVKCRIGLCEG 156
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A+ FV M + PD F V A + + + +H VVK G+ V ++L
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG-RGVHGYVVKSGLEDCVFVASSLA 215
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
Y C ++ A K+FDE P RN
Sbjct: 216 DMYGKCG---------VLDDASKVFDEIP----------------DRN------------ 238
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
AVAWNA++ GYV++G EEA F M G++ T ++ +SAS N G G
Sbjct: 239 -----AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+Q HA + ++ + +L+ FY K G + A VFD+M +D+V+WN I+SG
Sbjct: 294 KQSHAIAIVNGMELDN----ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y+ +E+A ++ + + L V ++ L + E+LKL +++
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 175/397 (44%), Gaps = 20/397 (5%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L + + + + F ++ + ++D+Y K +I A +FD T D+ TLL+AY+
Sbjct: 393 LGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYA 452
Query: 83 AAGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
+G A +LF + + I++N ++ + N A +F++M+ G P+
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI 512
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
S++T++ M E L + + G+ P+ + ++ C ++L +
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLR-KMQESGLR--PNAFSITVALSACAHLASLHIGRTIH 569
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
+ + L + T+++ Y + D+ A K+ + NAMIS Y
Sbjct: 570 GYIIRNLQHSSLVSIE----TSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYAL 625
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL--RTVVQPSE 318
+G +EA +R + +G++ D T T+++SA + G N ++ ++ R++ E
Sbjct: 626 YGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFR 377
H+ L ++ G+ +A + ++MP + D ++++ R+ E ++ R
Sbjct: 686 HYGL-----MVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSR 740
Query: 378 EVPE---RNLLTWTVMISGLAESGFGEESLKLFNQMK 411
++ E N + + + A G +E +K+ MK
Sbjct: 741 KLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMK 777
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 164/379 (43%), Gaps = 83/379 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
AR IHA +LT G ++ PYA++ L+S Y
Sbjct: 113 ARQIHALVLTAG--------------AGAATESPYANN--------------NLISMYVR 144
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFVRMKRDGFAPDPFSF 142
G+++ A K+F+ P R+ +SYNA+ AYS N D A L M + P+ +F
Sbjct: 145 CGSLEQARKVFDKMP--HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++++ +++ E+ L+ ++K G V ++L Y C
Sbjct: 203 TSLVQVCAVL-EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG------------- 248
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
DL SAR++ D + + AVAWN MI G +++
Sbjct: 249 -----------------------------DLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
E+ FR M G+ ++TY+ +++ G ++ G+ +HA R +V S L
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA---RIIVSDSLA-DL 335
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV--- 379
++NAL+ Y CG + +A VF ++ +LVSWN+I+SG E+A ++R +
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 380 --PERNLLTWTVMISGLAE 396
P + T++ IS AE
Sbjct: 396 STPRPDEYTFSAAISATAE 414
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 159/400 (39%), Gaps = 89/400 (22%)
Query: 19 ATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLL 78
+ +L + IHA I+ + + N L+D+YC ++ A ++F + NP++
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNL------- 366
Query: 79 SAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-P 137
+S+N+++ S N G A+ ++ R+ R P
Sbjct: 367 --------------------------VSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 138 DPFSFSTVLGAMSLIAEEEW--HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
D ++FS A+S AE E H + LH V K G E
Sbjct: 401 DEYTFS---AAISATAEPERFVHGKLLHGQVTKLGY-----------------------E 434
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
V + TT+++ Y +N + SA+K+ D M V W MI
Sbjct: 435 RSVFVG-------------------TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
G+ R G E A F +M+ + D ++ +S+I A + + G H +RT
Sbjct: 476 VGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFD 535
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
++SV AL+ Y K GK A +F DL WN++L Y +E+A
Sbjct: 536 C----VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSF 591
Query: 376 FREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
F ++ E + T+ +++ + G + L+NQMK
Sbjct: 592 FEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 57/318 (17%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F TTLLS Y + A+K+F+ + RD + + M+ +S + AV+ F+ M
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDV--MKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
R+ D FS S+V+GA S +A + HC ++ G CV SV L+
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLR-QGEVFHCLAIRTGFDCVMSVCGALVDM------ 547
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 250
Y +N +A + ++P
Sbjct: 548 ------------------------------------YGKNGKYETAETIFSLASNPDLKC 571
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN+M+ Y +HG+ E+A F ++ G D TY SL++A + G G+ L +
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631
Query: 311 RTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS--WNAILSGYINAR 367
++ +H+ + ++ +K G + +A E+ ++ P + + W +LS +N R
Sbjct: 632 EQGIKAGFKHY-----SCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTR 686
Query: 368 RLE----EAKFIFREVPE 381
L+ A+ I + PE
Sbjct: 687 NLQIGLYAAEQILKLDPE 704
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE-AFDTFRKMHSMGI 279
+I+ YVR L ARK+ D M H V++NA+ S Y R+ + AF M +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ + T+TSL+ G L++ +++ + S++ + V +++ Y+ CG L
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK--LGYSDNVV--VQTSVLGMYSSCGDLE 251
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLA 395
AR +FD + RD V+WN ++ G + ++E+ FR + + T++++++G +
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 396 ESG 398
+ G
Sbjct: 312 KLG 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 206 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM--ISGYVRHG- 262
LF E + + + +I+ YVR L ARK+ D M V + + YV G
Sbjct: 11 LFVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGS 70
Query: 263 -LYEE--AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
L+ + +F+ + M + + L + + RQ+HA VL +
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ NN LI+ Y +CG L QAR+VFDKMP R++VS+NA+ S Y +R + A + F
Sbjct: 131 SPYA-NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY--SRNPDFASYAF 184
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 169/353 (47%), Gaps = 65/353 (18%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
+ D D+F L+ YS G + A ++F+ PV RD +S+N+++ YS +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGYSSHGY 187
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS--LIAEEEWHCQQLHCDVVKWGVMCVPSV 177
A++++ +K PD F+ S+VL A L+ ++ Q LH +K GV V V
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG---QGLHGFALKSGVNSVVVV 244
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N L++ Y+ T AR++FDE + +D S+ TMI GY++ +
Sbjct: 245 NNGLVAMYLKFRRPT---------DARRVFDE--MDVRDSVSYNTMICGYLKLE------ 287
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
M+ VR ++ E D F+ D T +S++ A +
Sbjct: 288 ----------------MVEESVR--MFLENLDQFKP--------DLLTVSSVLRACGHLR 321
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFIL--SVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
+ + ++ Y+L+ F+L +V N LI Y KCG ++ AR+VF+ M +D VS
Sbjct: 322 DLSLAKYIYNYMLKA------GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 356 WNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMIS---GLAESGFGE 401
WN+I+SGYI + L EA +F+ + + + +T+ ++IS LA+ FG+
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 157/394 (39%), Gaps = 84/394 (21%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+LA+ I+ ++L GF L +RN LID+Y K
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAK----------------------------- 354
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
G++ A +FN+ + +DT+S+N+++ Y + D A+KLF M D +
Sbjct: 355 --CGDMITARDVFNS--MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+ ++ + +A+ ++ + LH + +K G+ SV N L+ Y C
Sbjct: 411 YLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSVSNALIDMYAKCG------------ 457
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
++ + K+ M V WN +IS VR
Sbjct: 458 ------------------------------EVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G + +M + D T+ + + G+++H +LR +
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE---- 543
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
L + NALI Y+KCG L + VF++M RD+V+W ++ Y E+A F ++ +
Sbjct: 544 LQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 382 RNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ + + +I + SG +E L F +MK
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 50/275 (18%)
Query: 90 AEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM 149
A ++F+ V RD++SYN M+ Y +V++F+ D F PD + S+VL A
Sbjct: 261 ARRVFDEMDV--RDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRAC 317
Query: 150 SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDE 209
+ + + ++ ++K G + +V N L+ Y C
Sbjct: 318 GHLRDLSL-AKYIYNYMLKAGFVLESTVRNILIDVYAKCG-------------------- 356
Query: 210 APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 269
D+ +AR + + M V+WN++ISGY++ G EA
Sbjct: 357 ----------------------DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
F+ M M Q D TY LIS S G+ LH+ +++ + LSV+NALI
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID----LSVSNALI 450
Query: 330 TFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
Y KCG++ + ++F M D V+WN ++S +
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN++I + ++GL+ EA + + K+ + D+YT+ S+I A GLF+ ++ V
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA--EMGDLVY 129
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
++ L V NAL+ Y++ G L +AR+VFD+MPVRDLVSWN+++SGY + E
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 371 EAKFIFREVPERNLLTWTV 389
EA I+ E+ +W V
Sbjct: 190 EALEIYHELKN----SWIV 204
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 271
+ +K+ S +I GYVR DL +ARK+ D M WNAMI+G ++ EE F
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
R+MH +G DEYT S+ S S + G+Q+H Y ++ ++ L VN++L
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE----LDLVVNSSLAHM 135
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
Y + GKL V MPVR+LV+WN ++ G
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 166
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 160/369 (43%), Gaps = 54/369 (14%)
Query: 47 IDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTIS 106
+ +Y K + P A ++ + + S L++ Y AG++ A K+F+ P R +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD--RKLTT 58
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDV 166
+NAM+ + LF M GF+PD ++ +V + + QQ+H
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG-QQIHGYT 117
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG 226
+K+G+ + V+N+ L+
Sbjct: 118 IKYGLE-LDLVVNSSLAHM----------------------------------------- 135
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y+RN L ++ M VAWN +I G ++G E ++ M G + ++ T+
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+++S+ + + G+Q+HA ++ +++V ++LI+ Y+KCG L A + F
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHA----EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLAESGFGE 401
+ D V W++++S Y + +EA +F + E+ N + + ++ + SG +
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 402 ESLKLFNQM 410
+ L+LF+ M
Sbjct: 312 KGLELFDMM 320
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 138/314 (43%), Gaps = 54/314 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ ++L Y G ++ E + + PV R+ +++N ++ + N + L+
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPV--RNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MK G P+ +F TVL + S +A QQ+H + +K G V +V+++L+S Y C
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIR-GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ A K F E ++DE V
Sbjct: 242 C---------LGDAAKAFSE----REDEDE-----------------------------V 259
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HA 307
W++MIS Y HG +EA + F M ++++E + +L+ A ++GL + G +L
Sbjct: 260 MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 319
Query: 308 YVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYIN 365
V + +P +H+ ++ + G L QA + MP++ D+V W +LS
Sbjct: 320 MVEKYGFKPGLKHY-----TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 366 ARRLEEAKFIFREV 379
+ E A+ +F+E+
Sbjct: 375 HKNAEMAQRVFKEI 388
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 162/396 (40%), Gaps = 117/396 (29%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIP----YAHHLFDKTPNP-DIFSRTT 76
T R IHA + G ++ + + Y S P YAH +F K P ++F T
Sbjct: 31 TKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNT 90
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ Y+ GN +IS A L+ M+ G
Sbjct: 91 LIRGYAEIGN-----------------SIS----------------AFSLYREMRVSGLV 117
Query: 137 -PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
PD ++ ++ A++ +A+ + +H V++ G + V N+LL Y C
Sbjct: 118 EPDTHTYPFLIKAVTTMADVRLG-ETIHSVVIRSGFGSLIYVQNSLLHLYANCG------ 170
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
D+ASA K+ D M VAWN++I
Sbjct: 171 ------------------------------------DVASAYKVFDKMPEKDLVAWNSVI 194
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
+G+ +G EEA + +M+S GI+ D +T SL+SA G G+++H Y+++ +
Sbjct: 195 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ H +N L+ Y +CG++ +A+ +FD+M ++ VS
Sbjct: 255 RNLH----SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-------------------- 290
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
WT +I GLA +GFG+E+++LF M+
Sbjct: 291 -----------WTSLIVGLAVNGFGKEAIELFKYME 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 60/299 (20%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
I+ + +LL Y+ G+V A K+F+ P +D +++N+++ ++ N A+ L+ M
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
G PD F+ ++L A + I +++H ++K G+ N LL Y C
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLG-KRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----- 245
+ A+ LFDE + K+ SWT++I G N A +L M
Sbjct: 273 ---------VEEAKTLFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P + + ++ G+ +E F+ FR+M +EY
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMR------EEYK-------------------- 355
Query: 306 HAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
++P EHF ++ + G++ +A E MP++ ++V W +L
Sbjct: 356 --------IEPRIEHF-----GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 150/363 (41%), Gaps = 85/363 (23%)
Query: 14 LNHPSATQTLAR--AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI 71
LNH +ATQ++++ A+H H++T G + H+
Sbjct: 22 LNHFAATQSISKTKALHCHVITGG---------------------RVSGHIL-------- 52
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
+TL Y+ G++ A KLF P + +SYN +++ Y H A+ +F+RM
Sbjct: 53 ---STLSVTYALCGHITYARKLFEEMPQS--SLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 132 RDGF--APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+G PD +++ V A + +K G++ +L +
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKS------------MKLGLVVHGRILRSWFG------ 149
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+D+ ++A Y+ + AR + D M + +
Sbjct: 150 -------------------------RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN MISGY R+G +A F M + + +D T S++ + GR +H V
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ + V NAL+ Y KCG++ +AR VFD+M RD+++W +++GY +
Sbjct: 245 EEKRLGDK----IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300
Query: 370 EEA 372
E A
Sbjct: 301 ENA 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+T+ Y + ARKL + M +++N +I YVR GLY +A F +M S G++
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 281 M--DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
D YTY + A+ G +H +LR+ ++ V NAL+ Y GK+
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKY----VQNALLAMYMNFGKV 168
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
AR+VFD M RD++SWN ++SGY + +A +F
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMF 206
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 175/438 (39%), Gaps = 45/438 (10%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
F+A+ + L +H IL + F ++N L+ +Y + A +FD N
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR 181
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFN---ATPVTLRDTISYNAMVKAYSH--NLDGHAAV 124
D+ S T++S Y G + A +F+ V L D + +M+ H +L+ V
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL-DHATIVSMLPVCGHLKDLEMGRNV 240
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSL----IAEEEWHCQQLHC-DVVKWGVMCVP---- 175
V KR G D L M L + E + ++ DV+ W M
Sbjct: 241 HKLVEEKRLG---DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 176 -SVLNTLLSCY-----------ICCASSTLVESPVLMASARKLFDEAPLSQK---DEPSW 220
V N L C + AS V L + K + Q+ D
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T++I+ Y + + ++ G + W+A+I+G V++ L +A F++M ++
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ T SL+ A +H Y+ +T S L L+ Y+KCG L
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS----LDAATGLVHVYSKCGTLES 473
Query: 341 AREVF----DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMIS 392
A ++F +K +D+V W A++SGY A +F E+ N +T+T ++
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 393 GLAESGFGEESLKLFNQM 410
+ SG EE L LF M
Sbjct: 534 ACSHSGLVEEGLTLFRFM 551
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 128/319 (40%), Gaps = 53/319 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI T+L+S Y+ V L ++F+ + T ++A++ N A+ LF R
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGA--SKYHTGPWSAIIAGCVQNELVSDALGLFKR 410
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+R+ P+ + +++L A + +A+ +HC + K G M L+ Y C
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLR-QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ + SA K+F+ K + V
Sbjct: 470 T---------LESAHKIFNGIQEKHKSKD-----------------------------VV 491
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W A+ISGY HG A F +M G+ +E T+TS ++A ++GL G L ++
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Query: 310 LR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINA 366
L + S H+ ++ + G+L +A + +P + W A+L+ +
Sbjct: 552 LEHYKTLARSNHY-----TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Query: 367 RRLE----EAKFIFREVPE 381
++ A +F PE
Sbjct: 607 ENVQLGEMAANKLFELEPE 625
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 173/376 (46%), Gaps = 32/376 (8%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD 103
N +I + ++ A LFD+ P + S T +++ +G V AE+LF PV +D
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPV--KD 158
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
T ++N+MV Y A+KLF +M + S++T++ + + E + L
Sbjct: 159 TAAWNSMVHGYLQFGKVDDALKLFKQMP----GKNVISWTTMICGLD---QNERSGEAL- 210
Query: 164 CDVVKWGVMCVPSVLNTLLSCYI-CCASSTL----VESPVLMASARKLFDEAPLSQKDEP 218
D+ K + C + +C I CA++ ++ L+ L++E +
Sbjct: 211 -DLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSA----- 264
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
++I Y + +RK+ D H W A++SGY + +E+A F M
Sbjct: 265 ---SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
I ++ T+ S +++ G + G+++H ++ ++ V N+L+ Y+ G +
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF----VGNSLVVMYSDSGNV 377
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGL 394
A VF K+ + +VSWN+I+ G R + A IF ++ E + +T+T ++S
Sbjct: 378 NDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSAC 437
Query: 395 AESGFGEESLKLFNQM 410
+ GF E+ KLF M
Sbjct: 438 SHCGFLEKGRKLFYYM 453
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 45/208 (21%)
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR++F++ P +T MI GY R++ L A L D M V+WN+MISG V G
Sbjct: 54 AREVFNQVP--SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
A F +M + ++T++++ F +G
Sbjct: 112 DMNTAVKLFDEMPERSV----VSWTAMVNGCFRSG------------------------- 142
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
K+ QA +F +MPV+D +WN+++ GY+ ++++A +F+++P +
Sbjct: 143 --------------KVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 383 NLLTWTVMISGLAESGFGEESLKLFNQM 410
N+++WT MI GL ++ E+L LF M
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNM 216
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 68/248 (27%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV---------- 249
+ A LFDE P+ +D SW +MI+G V D+ +A KL D M V
Sbjct: 82 LVDALNLFDEMPV--RDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF 139
Query: 250 ---------------------AWNAMISGYVRHGLYEEAFDTFRKMHS----------MG 278
AWN+M+ GY++ G ++A F++M G
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 279 IQMDEYTYTSL---------------------ISASFNTGLFNCGRQLHAYVLRTVVQPS 317
+ +E + +L I+A N F+ G Q+H +++
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
E+ V+ +LITFY C ++ +R+VFD+ + W A+LSGY ++ E+A IF
Sbjct: 260 EY----VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFS 315
Query: 378 EVPERNLL 385
+ ++L
Sbjct: 316 GMLRNSIL 323
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 161/394 (40%), Gaps = 91/394 (23%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R H ++T GF I + L +Y + A +FD+ P PD+
Sbjct: 181 LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDV----------- 229
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR-DGFAPDPFS 141
I + A++ A+S N A+ LF M R G PD +
Sbjct: 230 ----------------------ICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F TVL A + + +++H ++ G+ V ++LL Y C S
Sbjct: 268 FGTVLTACGNLRRLK-QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS----------- 315
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
+ AR++ +GM+ +V+W+A++ GY ++
Sbjct: 316 -------------------------------VREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA-YVLRTVVQPSEHF 320
G +E+A + FR+M + D Y + +++ A G+++H YV R
Sbjct: 345 GEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN---- 396
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+ V +ALI Y K G + A V+ KM +R++++WNA+LS R EEA F ++
Sbjct: 397 -VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 381 ERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
++ + +++ +++ +G +E F M
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 54/353 (15%)
Query: 55 NIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG-NVKLAEKLFNATPVTLRDTISYNAMVKA 113
I + H+ D +LLS Y G ++ ++F+ V +D IS+ +M+
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFV--KDAISWTSMMSG 137
Query: 114 YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC 173
Y + A+++FV M G + F+ S+ + A C +L V+ G C
Sbjct: 138 YVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA----------CSEL--GEVRLG-RC 184
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
V+ T + SSTL A L Y N +
Sbjct: 185 FHGVVITHGFEWNHFISSTL----------------AYL--------------YGVNREP 214
Query: 234 ASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISA 292
AR++ D M P + W A++S + ++ LYEEA F MH G+ D T+ ++++A
Sbjct: 215 VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
N G+++H ++ + + + V ++L+ Y KCG + +AR+VF+ M ++
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSN----VVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI---SGLAESGFGEE 402
VSW+A+L GY E+A IFRE+ E++L + ++ +GLA G+E
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKE 383
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
G EA HS I Y SL+ F G Q HA+V+++ ++ +
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN-- 97
Query: 322 LSVNNALITFYTKCG-KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
V N+L++ Y K G + + R VFD V+D +SW +++SGY+ + +A +F E+
Sbjct: 98 --VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM 154
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 174/401 (43%), Gaps = 80/401 (19%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+S YS +G++ L+E++F R I N M+ ++S + A++LF RM ++G
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
D FS ++L + + +Q+H +K G++ +V ++L + Y C +L ES
Sbjct: 451 TDEFSVCSLLSVLDCLNLG----KQVHGYTLKSGLVLDLTVGSSLFTLYSKCG--SLEES 504
Query: 197 PVL------------------------MASARKLFDE----------------------- 209
L + A LF E
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 210 APLSQKDEPSWTTMIAGYVRNDDLASA--------------RKLLDGMTHPIAVAWNAMI 255
L + E T+ AG + DL SA R++ D + V+ +++I
Sbjct: 565 PSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLI 624
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--V 313
SGY +HGL ++ F FR M G MD + +S++ A+ + + G Q+HAY+ +
Sbjct: 625 SGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLC 684
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+P SV ++L+T Y+K G + + F ++ DL++W A+++ Y + EA
Sbjct: 685 TEP------SVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEAL 738
Query: 374 FIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
++ + E+ +T+ ++S + G EES N M
Sbjct: 739 QVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 57/338 (16%)
Query: 61 HLFDKTPNP-DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
HL + P D+F +LLS YS +G++ A KLF+ P D +S N M+ Y +
Sbjct: 73 HLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQP--DVVSCNIMISGYKQHRL 130
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
+++ F +M GF + S+ +V+ A S + + + + C +K G
Sbjct: 131 FEESLRFFSKMHFLGFEANEISYGSVISACSAL-QAPLFSELVCCHTIKMGYFFYE---- 185
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
+VES +I + +N A K+
Sbjct: 186 -------------VVES-------------------------ALIDVFSKNLRFEDAYKV 207
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGL 298
WN +I+G +R+ Y FD F +M +G Q D YTY+S+++A +
Sbjct: 208 FRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQKPDSYTYSSVLAACASLEK 266
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
G+ + A V++ + + V A++ Y KCG + +A EVF ++P +VSW
Sbjct: 267 LRFGKVVQARVIKCGAED-----VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 359 ILSGYINARRLEEAKFIFREVP----ERNLLTWTVMIS 392
+LSGY + A IF+E+ E N T T +IS
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 65/296 (21%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+ L++ YS G++KLA ++++ P D +S ++++ YS + LF M G
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPEL--DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI-------C 187
F D F+ S++L A +L ++E Q+H + K G+ PSV ++LL+ Y C
Sbjct: 648 FTMDSFAISSILKAAAL-SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + + + P L+A WT
Sbjct: 707 CKAFSQINGPDLIA------------------WT-------------------------- 722
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR-QLH 306
A+I+ Y +HG EA + M G + D+ T+ ++SA + GL L+
Sbjct: 723 -----ALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLN 777
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ V ++P + + +AL + G+L +A + M ++ D + W +L+
Sbjct: 778 SMVKDYGIEPENRHYVCMVDAL----GRSGRLREAESFINNMHIKPDALVWGTLLA 829
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 171/416 (41%), Gaps = 86/416 (20%)
Query: 25 RAIHAHILTTGFRLTPL---IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ + AH+L L P + L+ Y S ++ A LFD P PD+ S ++S Y
Sbjct: 68 KILQAHLLRR--YLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGY 125
Query: 82 SA----AGNVKLAEKL----FNATPVTLRDTIS--------------------------- 106
+++ K+ F A ++ IS
Sbjct: 126 KQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE 185
Query: 107 --YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL-GAMSLIAEEEWHCQQLH 163
+A++ +S NL A K+F RD + + + ++T++ GA+ Q
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVF----RDSLSANVYCWNTIIAGAL--------RNQNYG 233
Query: 164 CDVVKWGVMCV----PSVLNTLLSCYICCAS------STLVESPVLMASARKLFDEAPLS 213
+ MCV P T S CAS +V++ V+ A +F
Sbjct: 234 AVFDLFHEMCVGFQKPDSY-TYSSVLAACASLEKLRFGKVVQARVIKCGAEDVF------ 286
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
T ++ Y + +A A ++ + +P V+W M+SGY + A + F++
Sbjct: 287 -----VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE 341
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
M G++++ T TS+ISA + Q+HA+V ++ + SV ALI+ Y+
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF----YLDSSVAAALISMYS 397
Query: 334 KCGKLVQAREVF---DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLT 386
K G + + +VF D + +++V N +++ + +++ +A +F + + L T
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRT 451
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 161/392 (41%), Gaps = 86/392 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
+A H ++ F L + N L+ +YCK + A LF + S
Sbjct: 350 GKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI---------------SE 394
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
GN + ++N M+K Y ++LF +++ G D S +
Sbjct: 395 EGNKE-----------------AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASAT 437
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+V+ + S I + LHC VVK + SV+N+L+ Y T+ A
Sbjct: 438 SVISSCSHIGAVLLG-KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTV---------A 487
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
++F EA + + WNAMI+ YV
Sbjct: 488 WRMFCEADTN----------------------------------VITWNAMIASYVHCEQ 513
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI-L 322
E+A F +M S + T +L+ A NTG G+ +H Y+ T EH + L
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET-----EHEMNL 568
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
S++ ALI Y KCG L ++RE+FD +D V WN ++SGY +E A +F ++ E
Sbjct: 569 SLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Query: 383 NLL----TWTVMISGLAESGFGEESLKLFNQM 410
++ T+ ++S +G E+ KLF +M
Sbjct: 629 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKM 660
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 51/330 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ +IF + L+S+Y++ G L+ ++F+ VT RD +N+++KA+ N D ++ F
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHL--VTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M G +PD F+ V+ A AE W H
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSA---CAELLW----FHV----------------------- 143
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
T V VL FD ++ + + Y + L A + D M
Sbjct: 144 ---GTFVHGLVLKHGG---FD------RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRD 191
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE---YTYTSLISASFNTGLFNCGRQ 304
VAW A+ISG+V++G E KMHS G +D+ T A N G GR
Sbjct: 192 VVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRC 251
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
LH + ++ + S+ V +++ +FY+K G +A F ++ D+ SW +I++
Sbjct: 252 LHGFAVKNGLASSKF----VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLA 307
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGL 394
+ +EE+ +F E+ + + V+IS L
Sbjct: 308 RSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 130/350 (37%), Gaps = 84/350 (24%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L +++H +++ T LT + N LID+Y K ++ A +F +
Sbjct: 451 LGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-------------- 496
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
+ I++NAM+ +Y H A+ LF RM + F P +
Sbjct: 497 --------------------NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 536
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
T+L A C + +L ++
Sbjct: 537 VTLLMA--------------------------------------CVNTGSLERGQMIHRY 558
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
+ E LS +I Y + L +R+L D AV WN MISGY HG
Sbjct: 559 ITETEHEMNLSLS-----AALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHG 613
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS-EHFI 321
E A F +M ++ T+ +L+SA + GL G++L + + V+P+ +H+
Sbjct: 614 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY- 672
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLE 370
+ L+ ++ G L +A MP D V W +LS + E
Sbjct: 673 ----SCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 60/318 (18%)
Query: 72 FSRTTLLSA-----YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
F R T + A YS G ++ A +F+ P RD +++ A++ + N + +
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPD--RDVVAWTAIISGHVQNGESEGGLGY 214
Query: 127 FVRMKRDGF---APDPFSFSTVLGAMS-LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
+M G P+P + A S L A +E C LH VK G+
Sbjct: 215 LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRC--LHGFAVKNGL----------- 261
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
ASS V+S + + S+ PS + + ++D+ S
Sbjct: 262 ------ASSKFVQSSMF----------SFYSKSGNPSEAYLSFRELGDEDMFS------- 298
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
W ++I+ R G EE+FD F +M + G+ D + LI+ L G
Sbjct: 299 --------WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ H +V+R +V N+L++ Y K L A ++F ++ + +WN +L
Sbjct: 351 KAFHGFVIRHCFSLDS----TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 362 GYINARRLEEAKFIFREV 379
GY + + +FR++
Sbjct: 407 GYGKMKCHVKCIELFRKI 424
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 49/290 (16%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+L+S + GNV A +F+ ++ RDTIS+N++ AY+ N + ++F M+R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFD--QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
+ + ST+L + + ++W + +H VVK G V V NTLL Y S
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV- 296
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
EA L K P+ DL ++WN+
Sbjct: 297 ---------------EANLVFKQMPT-----------KDL---------------ISWNS 315
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+++ +V G +A M S G ++ T+TS ++A F F GR LH V
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV---- 371
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
V + + NAL++ Y K G++ ++R V +MP RD+V+WNA++ GY
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 144/340 (42%), Gaps = 52/340 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
L+S Y G + + ++ P RD +++NA++ Y+ + D A+ F M+ +G
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ + + +VL A L + + LH +V G
Sbjct: 442 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF----------------------- 478
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ DE ++I Y + DL+S++ L +G+ + + WNAM
Sbjct: 479 -------------------ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 519
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
++ HG EE KM S G+ +D+++++ +SA+ + G+QLH ++
Sbjct: 520 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 579
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ + FI NA Y+KCG++ + ++ R L SWN ++S EE
Sbjct: 580 E-HDSFIF---NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 375 IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
F E+ E + +T+ +++ + G ++ L ++ +
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 675
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T +L Y G V + K+F P R+ +S+ +++ YS + + ++
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKG 133
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ +G + S S V+ + L+ +E +Q+ VVK G+ +V N+L+S
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLG-RQIIGQVVKSGLESKLAVENSLIS------ 186
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ G + N D A+ + D M+ +
Sbjct: 187 ----------------------------------MLGSMGNVDYANY--IFDQMSERDTI 210
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN++ + Y ++G EE+F F M +++ T ++L+S + GR +H V
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 270
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN-ARR 368
++ ++ V N L+ Y G+ V+A VF +MP +DL+SWN++++ ++N R
Sbjct: 271 VKMGFDS----VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 326
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLA 395
L+ + + + + S LA
Sbjct: 327 LDALGLLCSMISSGKSVNYVTFTSALA 353
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 141/349 (40%), Gaps = 86/349 (24%)
Query: 17 PSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
P + +HA+I++ GF ++N LI +Y K
Sbjct: 459 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK------------------------ 494
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
G++ ++ LFN + R+ I++NAM+ A +H+ G +KL +M+ G +
Sbjct: 495 -------CGDLSSSQDLFNG--LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
D FSFS L A + +A E QQLH VK G + N Y C
Sbjct: 546 LDQFSFSEGLSAAAKLAVLE-EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG------- 597
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
++ K+L + +WN +IS
Sbjct: 598 -----------------------------------EIGEVVKMLPPSVNRSLPSWNILIS 622
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQ 315
RHG +EE TF +M MGI+ T+ SL++A + GL + G + + R ++
Sbjct: 623 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 682
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILS 361
P+ EH I +I + G+L +A KMP++ DLV W ++L+
Sbjct: 683 PAIEHCI-----CVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLA 725
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 77/130 (59%), Gaps = 5/130 (3%)
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG-LFNCGRQLHA 307
V+WN M+SG VR GLY E + FRKM +GI+ + SL++A +G +F G Q+H
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+V ++ + + V+ A++ Y G + +R+VF++MP R++VSW +++ GY +
Sbjct: 67 FVAKSGLLSDVY----VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 368 RLEEAKFIFR 377
EE I++
Sbjct: 123 EPEEVIDIYK 132
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 49/290 (16%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+L+S + GNV A +F+ ++ RDTIS+N++ AY+ N + ++F M+R
Sbjct: 198 ENSLISMLGSMGNVDYANYIFD--QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 255
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
+ + ST+L + + ++W + +H VVK G V V NTLL Y S
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV- 313
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
EA L K P+ DL ++WN+
Sbjct: 314 ---------------EANLVFKQMPT-----------KDL---------------ISWNS 332
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+++ +V G +A M S G ++ T+TS ++A F F GR LH V
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV---- 388
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
V + + NAL++ Y K G++ ++R V +MP RD+V+WNA++ GY
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 144/340 (42%), Gaps = 52/340 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
L+S Y G + + ++ P RD +++NA++ Y+ + D A+ F M+ +G
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ + + +VL A L + + LH +V G
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF----------------------- 495
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ DE ++I Y + DL+S++ L +G+ + + WNAM
Sbjct: 496 -------------------ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 536
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
++ HG EE KM S G+ +D+++++ +SA+ + G+QLH ++
Sbjct: 537 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 596
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ + FI NA Y+KCG++ + ++ R L SWN ++S EE
Sbjct: 597 E-HDSFIF---NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652
Query: 375 IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
F E+ E + +T+ +++ + G ++ L ++ +
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMI 692
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 143/327 (43%), Gaps = 50/327 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T +L Y G V + K+F P R+ +S+ +++ YS + + ++
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPD--RNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ +G + S S V+ + L+ +E +Q+ VVK G+ +V N+L+S
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLG-RQIIGQVVKSGLESKLAVENSLIS------ 203
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ G + N D A+ + D M+ +
Sbjct: 204 ----------------------------------MLGSMGNVDYANY--IFDQMSERDTI 227
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN++ + Y ++G EE+F F M +++ T ++L+S + GR +H V
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN-ARR 368
++ ++ V N L+ Y G+ V+A VF +MP +DL+SWN++++ ++N R
Sbjct: 288 VKMGFDS----VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRS 343
Query: 369 LEEAKFIFREVPERNLLTWTVMISGLA 395
L+ + + + + S LA
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALA 370
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 141/349 (40%), Gaps = 86/349 (24%)
Query: 17 PSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
P + +HA+I++ GF ++N LI +Y K
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK------------------------ 511
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
G++ ++ LFN + R+ I++NAM+ A +H+ G +KL +M+ G +
Sbjct: 512 -------CGDLSSSQDLFNG--LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
D FSFS L A + +A E QQLH VK G + N Y C
Sbjct: 563 LDQFSFSEGLSAAAKLAVLE-EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG------- 614
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
++ K+L + +WN +IS
Sbjct: 615 -----------------------------------EIGEVVKMLPPSVNRSLPSWNILIS 639
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQ 315
RHG +EE TF +M MGI+ T+ SL++A + GL + G + + R ++
Sbjct: 640 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 699
Query: 316 PS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILS 361
P+ EH I +I + G+L +A KMP++ DLV W ++L+
Sbjct: 700 PAIEHCI-----CVIDLLGRSGRLAEAETFISKMPMKPNDLV-WRSLLA 742
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 5/152 (3%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y + + AR L D M V+WN M+SG VR GLY E + FRKM +GI+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 287 TSLISASFNTG-LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 345
SL++A +G +F G Q+H +V ++ + + V+ A++ Y G + +R+VF
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY----VSTAILHLYGVYGLVSCSRKVF 117
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
++MP R++VSW +++ GY + EE I++
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 149
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 142/340 (41%), Gaps = 50/340 (14%)
Query: 46 LIDIYCKSSNIPYAH-HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDT 104
LI + C +++ H L + + D F LL K + LF+ T +
Sbjct: 19 LISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQ--FPNI 76
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHC 164
YN+++ + +N H + LF+ +++ G F+F VL A + + + LH
Sbjct: 77 FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID-LHS 135
Query: 165 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 224
VVK G D + T+++
Sbjct: 136 LVVKCGF------------------------------------------NHDVAAMTSLL 153
Query: 225 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
+ Y + L A KL D + V W A+ SGY G + EA D F+KM MG++ D Y
Sbjct: 154 SIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSY 213
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
++SA + G + G + Y+ +Q + V L+ Y KCGK+ +AR V
Sbjct: 214 FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF----VRTTLVNLYAKCGKMEKARSV 269
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
FD M +D+V+W+ ++ GY + +E +F ++ + NL
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 53/347 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N D+ + T+LLS YS +G + A KLF+ P R +++ A+ Y+ + A+ LF
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD--RSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
+M G PD + VL A + + D +W V
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGD---------LDSGEWIV---------------- 235
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
K +E + QK+ TT++ Y + + AR + D M
Sbjct: 236 -----------------KYMEEMEM-QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKD 277
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V W+ MI GY + +E + F +M ++ D+++ +S+ + G + G +
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ R + L + NALI Y KCG + + EVF +M +D+V NA +SG
Sbjct: 338 LIDRHEFLTN----LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG 393
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
++ + +F + + + T+ ++ G +G ++ L+ FN +
Sbjct: 394 HVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 35/165 (21%)
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P +N++I+G+V + L+ E D F + G+ + +T+ ++ A G L
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H+ V+ KCG F+ D+ + ++LS Y
Sbjct: 134 HSLVV-----------------------KCG--------FN----HDVAAMTSLLSIYSG 158
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ RL +A +F E+P+R+++TWT + SG SG E++ LF +M
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM 203
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 156/340 (45%), Gaps = 52/340 (15%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+L+ YS G+V + +F + RD +S+N M+ A+ N + L M++ GF
Sbjct: 358 SLMVMYSRCGSVHKSFGVF--LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
D + + +L A S + +E +Q H +++ G+ + + L+ Y
Sbjct: 416 KIDYITVTALLSAASNLRNKEIG-KQTHAFLIRQGIQ-FEGMNSYLIDMY---------S 464
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
L+ ++KLF+ + +++D+ +W N+MI
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATW-------------------------------NSMI 493
Query: 256 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
SGY ++G E+ F FRKM I+ + T S++ A G + G+QLH + +R +
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + V +AL+ Y+K G + A ++F + R+ V++ ++ GY E A +
Sbjct: 554 QN----VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 376 FREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
F + E + +T+ ++S + SG +E LK+F +M+
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMR 649
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 160/400 (40%), Gaps = 57/400 (14%)
Query: 39 TPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF---- 94
TP IR+RL I C+ N A LFD P P T++ + N+ LF
Sbjct: 39 TPSIRSRLSKI-CQDGNPQLARQLFDAIPKPTTVLWNTIIIGF-ICNNLPHEALLFYSRM 96
Query: 95 -NATPVTLRDTISYNAMVKA--YSHNLDGHAAVKL-FVRMKRDGF--------------- 135
P T D +Y++ +KA + NL AV +R ++
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL 156
Query: 136 -APDPFSFSTVLGAMSLIAEEE---------WH---------CQQLHCDVVKWGVMCVP- 175
APD F + V + + W+ C+Q +++ V P
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGI-MMRMEVKPSPV 215
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
S +N + I S ++ ++ V KL DE KD ++ I+ Y D+ S
Sbjct: 216 SFVNVFPAVSI---SRSIKKANVFYGLMLKLGDEYV---KDLFVVSSAISMYAELGDIES 269
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF-RKMHSMGIQMDEYTYTSLISASF 294
+R++ D WN MI YV++ E+ + F + S I DE TY SA
Sbjct: 270 SRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
GRQ H +V + + + N+L+ Y++CG + ++ VF M RD+V
Sbjct: 330 ALQQVELGRQFHGFVSKNF----RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVV 385
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
SWN ++S ++ +E + E+ ++ + ++ L
Sbjct: 386 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 47/247 (19%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+ YS +G +++++KLF + RD ++N+M+ Y+ N +F +M
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
P+ + +++L A S I + +QLH ++ ++
Sbjct: 519 PNAVTVASILPACSQIGSVDLG-KQLHGFSIR-----------------------QYLDQ 554
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
V +ASA ++ Y + + A + +V + MI
Sbjct: 555 NVFVASA-------------------LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV--V 314
GY +HG+ E A F M GI+ D T+ +++SA +GL + G ++ +R V +
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE-MREVYNI 654
Query: 315 QP-SEHF 320
QP SEH+
Sbjct: 655 QPSSEHY 661
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 57/339 (16%)
Query: 65 KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
K ++ ++L+ Y+ G + A + F+ + +D IS+ A++ A S G A+
Sbjct: 212 KVGVGNLIVESSLVYFYAQCGELTSALRAFDM--MEEKDVISWTAVISACSRKGHGIKAI 269
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE--WHCQQLHCDVVKWGVMCVPSVLNTLL 182
+F+ M F P+ F+ ++L A S EE+ +Q+H VVK
Sbjct: 270 GMFIGMLNHWFLPNEFTVCSILKACS---EEKALRFGRQVHSLVVK-------------- 312
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
++++ V + T+++ Y + +++ RK+ DG
Sbjct: 313 ---------RMIKTDVFVG-------------------TSLMDMYAKCGEISDCRKVFDG 344
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
M++ V W ++I+ + R G EEA FR M + + T S++ A + G G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
++LHA +++ ++ + + + + L+ Y KCG+ A V ++P RD+VSW A++SG
Sbjct: 405 KELHAQIIKNSIEKNVY----IGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG 460
Query: 363 YINARRLEEA----KFIFREVPERNLLTWTVMISGLAES 397
+ EA K + +E E N T++ + A S
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 54/315 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F T+L+ Y+ G + K+F+ ++ R+T+++ +++ A++ G A+ LF
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDG--MSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
MKR + + ++L A + ++LH ++K
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLG-KELHAQIIK--------------------- 413
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+E V + S T++ Y + + A +L + V
Sbjct: 414 --NSIEKNVYIGS-------------------TLVWLYCKCGESRDAFNVLQQLPSRDVV 452
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+W AMISG G EA D ++M G++ + +TY+S + A N+ GR +H+
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-- 510
Query: 310 LRTVVQPSEHFI--LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
+ H + + V +ALI Y KCG + +A VFD MP ++LVSW A++ GY
Sbjct: 511 ----IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNG 566
Query: 368 RLEEA-KFIFREVPE 381
EA K ++R E
Sbjct: 567 FCREALKLMYRMEAE 581
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 11/162 (6%)
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A A K FD+ + + +I+ VR DL ARK+ D M V W AMI GY++
Sbjct: 106 AMALKCFDDQVIYFGN-----NLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 261 HGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
+GL +EAF F GI+ +E + L++ F GRQ+H +++ V
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN--- 217
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
L V ++L+ FY +CG+L A FD M +D++SW A++S
Sbjct: 218 --LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 28/353 (7%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+++ T+L+S YS G LA ++F P + ++YNA + N + +F
Sbjct: 163 EVYVGTSLVSMYSRCGEWVLAARMFEKVP--HKSVVTYNAFISGLMENGVMNLVPSVFNL 220
Query: 130 MKR-DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M++ P+ +F + A + + ++ +QLH V+K V L+ Y C
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYG-RQLHGLVMKKEFQFETMVGTALIDMYSKC 279
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT---- 244
SA +F E ++ SW ++I+G + N +A +L + +
Sbjct: 280 RC---------WKSAYIVFTELK-DTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
P + WN++ISG+ + G EAF F +M S+ + TSL+SA + G++
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM--PVRDLVSWNAILSG 362
+H +V++ + + F+L+ +LI Y KCG AR +FD+ +D V WN ++SG
Sbjct: 390 IHGHVIKAAAE-RDIFVLT---SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 363 YINARRLEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y E A IF E E +L T+T ++S + G E+ ++F M+
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQ 498
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 135/332 (40%), Gaps = 55/332 (16%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP-DIFSRTTLLSAYS 82
R +H ++ F+ ++ LID+Y K A+ +F + + ++ S +++S
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 83 AAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
G + A +LF + D+ ++N+++ +S A K F RM P
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 141 SFSTVLGAMSLIAEEEW---HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
+++L A S I W + +++H V+K VL +L+ Y+ C S+
Sbjct: 370 CLTSLLSACSDI----WTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSW---- 421
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
AR++FD KD V WN MISG
Sbjct: 422 -----ARRIFDRFEPKPKD-------------------------------PVFWNVMISG 445
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQP 316
Y +HG E A + F + ++ T+T+++SA + G G Q+ + +P
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
S I +I + G+L +A+EV D+M
Sbjct: 506 STEHI----GCMIDLLGRSGRLREAKEVIDQM 533
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T +++ Y++ + A K+LD M + NA +SG + +G +AF F G
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
M+ T S++ G G QLH +++ + + V +L++ Y++CG+ V
Sbjct: 130 MNSVTVASVLGG---CGDIEGGMQLHCLAMKSGFEMEVY----VGTSLVSMYSRCGEWVL 182
Query: 341 AREVFDKMPVRDLVSWNAILSGYIN 365
A +F+K+P + +V++NA +SG +
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLME 207
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 47/310 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ + + LL+ Y G + + LF+ + +D I +N+M+ A + N AAV LF+
Sbjct: 121 DLATSSKLLTFYGRTGELVSSSCLFD--ELKEKDVIVWNSMITALNQNGRYIAAVGLFIE 178
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G D + A+S + C LHC ++ G++ S+ N L++ Y
Sbjct: 179 MIHKGNEFDSTTLLLAASALSSLHLSR-KCSMLHCLAIETGLVGDSSLCNALMNLY---- 233
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ ++L+SA + M H V
Sbjct: 234 --------------------------------------AKGENLSSAECVFTHMEHRDIV 255
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN +++ + +G ++ F+ M G + D T++ +ISA + G LH V
Sbjct: 256 SWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV 315
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+++ P H +SV N++I+ Y+KCG A VF+++ RD++S NAIL+G+
Sbjct: 316 IKSGYSPEAH--VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMF 373
Query: 370 EEAKFIFREV 379
EEA I ++
Sbjct: 374 EEAFGILNQM 383
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 163/385 (42%), Gaps = 59/385 (15%)
Query: 76 TLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+++ Y G AE LF T T RD +S+N+M+ A+S N H A LF + + +
Sbjct: 434 SVIDMYGKCGLTTQAELLFKTT--THRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-Y 490
Query: 136 APDPFSFSTVLGAM-------SLIAEEEWHC-----QQLHCDVVKWGVMCVPSVLNTLLS 183
+ FS STVL + SLI + HC L ++ M L + S
Sbjct: 491 SCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNS 550
Query: 184 CYICCASS------------------------TLVESP--------VLMASARKLFDEAP 211
CASS TL+ + VL
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS 610
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 271
L + D T+I Y R D+ SA K+ ++ P +WN +IS ++ E F F
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
R + ++ +E T+ L+SAS G + G Q H +++R Q + V+ AL+
Sbjct: 671 RNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF----VSAALVDM 723
Query: 332 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-----ERNLLT 386
Y+ CG L +VF V + +WN+++S + E+A +F+E+ E N +
Sbjct: 724 YSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSS 783
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
+ ++S + SGF +E L + QM+
Sbjct: 784 FISLLSACSHSGFIDEGLSYYKQME 808
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 47/304 (15%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L++ Y+ N+ AE +F T + RD +S+N ++ N +++ F M G
Sbjct: 229 LMNLYAKGENLSSAECVF--THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
D +FS V+ A S I EE + LH V+K G S
Sbjct: 287 ADTVTFSCVISACSSI-EELTLGESLHGLVIKSGY------------------------S 321
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 256
P EA +S + ++I+ Y + D +A + + + ++ NA+++
Sbjct: 322 P-----------EAHVSVGN-----SIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 257 GYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 315
G+ +G++EEAF +M S+ IQ D T S+ S + GR +H Y +R +Q
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 375
L V N++I Y KCG QA +F RDLVSWN+++S + +AK +
Sbjct: 426 SRA---LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 376 FREV 379
F+EV
Sbjct: 483 FKEV 486
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 161/413 (38%), Gaps = 67/413 (16%)
Query: 22 TLARAIHAHILTTGFRLTPLIR--NRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLS 79
TL ++H ++ +G+ + N +I +Y K + A +F++ D+ S +L+
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 80 AYSAAGNVKLAEKLFNATPVT------LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
++A G + A + N + +S ++ S + +G A VRM+
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQ 425
Query: 134 GFAPDPF-SFSTVLGAMSLIAEEEWHCQQL-HCDVVKWGVMC-----------VPSVLNT 180
A + S + G L + E + H D+V W M ++
Sbjct: 426 SRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE 485
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
++S Y C S S VL ++ + K W + DL SA L
Sbjct: 486 VVSEYSC---SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG------DLTSAFLRL 536
Query: 241 DGMTHPIAV-AWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGL 298
+ M+ + +WN++ISG G + E+ F+ M G I+ D T ISAS N GL
Sbjct: 537 ETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGL 596
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
GR H ++++ + + N LIT Y +C
Sbjct: 597 VLQGRCFHGLAIKSLRELDTQ----LQNTLITMYGRC----------------------- 629
Query: 359 ILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ +E A +F + + NL +W +IS L+++ G E +LF +K
Sbjct: 630 --------KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK 674
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
+D + + ++ Y R +L S+ L D + + WN+MI+ ++G Y A F +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
G + D T SA + L LH + T + S+ NAL+ Y K
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS----SLCNALMNLYAK 235
Query: 335 CGKLVQAREVFDKMPVRDLVSWNAILS 361
L A VF M RD+VSWN I++
Sbjct: 236 GENLSSAECVFTHMEHRDIVSWNTIMT 262
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 182/431 (42%), Gaps = 92/431 (21%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R +HAH++T+G I +L+ Y + + A +FD+ P
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPK--------------- 79
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
RD M+ A + N ++ F M +DG D F
Sbjct: 80 ------------------RDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVP 121
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
++L A + + E+ + +HC V+K+ ++++L+ Y S E + +A
Sbjct: 122 SLLKASRNLLDREFG-KMIHCLVLKFSYESDAFIVSSLIDMY-----SKFGE----VGNA 171
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRND-------------------DLASARKLLDGMT 244
RK+F + L ++D + MI+GY N D+ + L+ G +
Sbjct: 172 RKVFSD--LGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS 229
Query: 245 H--------------------PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
H P V+W ++ISG V + E+AFD F++M + G+ +
Sbjct: 230 HMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T +L+ A G+++H Y + T ++ +H V +AL+ Y KCG + +A +
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLE--DHGF--VRSALLDMYGKCGFISEAMIL 345
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGFG 400
F K P + V++N+++ Y N ++A +F ++ + + LT+T +++ + +G
Sbjct: 346 FRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLT 405
Query: 401 EESLKLFNQMK 411
+ LF M+
Sbjct: 406 DLGQNLFLLMQ 416
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 164/372 (44%), Gaps = 30/372 (8%)
Query: 21 QTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSA 80
+ + IH +L + I + LID+Y K + A +F D+ ++S
Sbjct: 133 REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISG 192
Query: 81 YS------AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
Y+ A N+ KL P D I++NA++ +SH + ++ M DG
Sbjct: 193 YANNSQADEALNLVKDMKLLGIKP----DVITWNALISGFSHMRNEEKVSEILELMCLDG 248
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ PD S+++++ + + E ++ G+ + + TLL A +TL
Sbjct: 249 YKPDVVSWTSIISGLVHNFQNEKAFDAFK-QMLTHGLYPNSATIITLLP-----ACTTLA 302
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSW--TTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
M +++ + ++ ++ + + ++ Y + ++ A L V +N
Sbjct: 303 ----YMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFN 358
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
+MI Y HGL ++A + F +M + G ++D T+T++++A + GL + G+ L +
Sbjct: 359 SMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNK 418
Query: 313 --VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRL 369
+V EH+ ++ + GKLV+A E+ M + DL W A+L+ N +
Sbjct: 419 YRIVPRLEHYA-----CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNM 473
Query: 370 EEAKFIFREVPE 381
E A+ + + E
Sbjct: 474 ELARIAAKHLAE 485
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 179/434 (41%), Gaps = 111/434 (25%)
Query: 57 PYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSH 116
P HH+ T L+ +Y G V+ A LF+ P RD +++ AM+ Y+
Sbjct: 41 PKKHHIL----------ATNLIVSYFEKGLVEEARSLFDEMPD--RDVVAWTAMITGYAS 88
Query: 117 NLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMC 173
+ A + F M + G +P+ F+ S+VL + M ++A + +H VVK G+
Sbjct: 89 SNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLA----YGALVHGVVVKLGMEG 144
Query: 174 VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
V N +++ Y C+ V M +A +F + + K++ +WTT+I G+ D
Sbjct: 145 SLYVDNAMMNMYATCS--------VTMEAACLIFRD--IKVKNDVTWTTLITGFTHLGDG 194
Query: 234 ASARKLLDGM--------THPIAVA-------------------------------WNAM 254
K+ M + I +A N++
Sbjct: 195 IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSI 254
Query: 255 ISGYVRHGLYEEAFDTFRKM------------------------------HSMGIQMDEY 284
+ Y R G EA F +M S G + Y
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCY 314
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+TSL++A N NCG+QLH + R + + + NALI Y KCG + ++ V
Sbjct: 315 TFTSLVAACANIAALNCGQQLHGRIFRRGFNKN----VELANALIDMYAKCGNIPDSQRV 370
Query: 345 FDKM-PVRDLVSWNAILSGYINARRLEEAKFIFREV------PERNLLTWTVMISGLAES 397
F ++ R+LVSW +++ GY + EA +F ++ P+R + + ++S +
Sbjct: 371 FGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR--IVFMAVLSACRHA 428
Query: 398 GFGEESLKLFNQMK 411
G E+ LK FN M+
Sbjct: 429 GLVEKGLKYFNVME 442
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 141/345 (40%), Gaps = 88/345 (25%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
T + IHA ++ GF+ + N ++D+YC+ + A H F + + D+ + TL+S
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL 289
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+ D A+ +F R + GF P+ ++
Sbjct: 290 ERS----------------------------------DSSEALLMFQRFESQGFVPNCYT 315
Query: 142 FSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
F++++ A + IA +C QQLH + + G + N L+ Y C + +
Sbjct: 316 FTSLVAACANIAA--LNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGN---------I 364
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
++++F E + R L V+W +M+ GY
Sbjct: 365 PDSQRVFGE-----------------------IVDRRNL---------VSWTSMMIGYGS 392
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
HG EA + F KM S GI+ D + +++SA + GL G + V SE+
Sbjct: 393 HGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN------VMESEYG 446
Query: 321 I---LSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
I + N ++ + GK+ +A E+ ++MP + D +W AIL
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILG 491
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY----INARRLE 370
+P +H IL+ N LI Y + G + +AR +FD+MP RD+V+W A+++GY NAR E
Sbjct: 40 KPKKHHILATN--LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWE 97
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 156/350 (44%), Gaps = 58/350 (16%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D + +L+ Y+ G ++ A+K+F+ PV R+++ + ++K Y +LF
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV--RNSVLWGVLMKGYLKYSKDPEVFRLF 198
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVM--CVPSVLNTLLSCY 185
M+ G A D A++LI C C V G + CV V
Sbjct: 199 CLMRDTGLALD---------ALTLI------CLVKACGNVFAGKVGKCVHGV-------- 235
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
+ R D++ Q ++I YV+ L +ARKL +
Sbjct: 236 ---------------SIRRSFIDQSDYLQ------ASIIDMYVKCRLLDNARKLFETSVD 274
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
V W +ISG+ + EAFD FR+M I ++ T +++ + + G G+ +
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 306 HAYVLRTVVQPSEHFILSVN-NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
H Y++R ++ +VN + I Y +CG + AR VFD MP R+++SW+++++ +
Sbjct: 335 HGYMIRNGIEMD-----AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFG 389
Query: 365 NARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
EEA F ++ +N+ +T+ ++S + SG +E K F M
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
+ D ++T+ I Y R ++ AR + D M ++W++MI+ + +GL+EEA D F K
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITF 331
M S + + T+ SL+SA ++G G + + R VV EH+ ++
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYA-----CMVDL 458
Query: 332 YTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEEAKFIFREVPERNL 384
+ G++ +A+ D MPV+ + S W A+LS A R+ + + E+ E+ L
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLS----ACRIHKEVDLAGEIAEKLL 508
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 42/219 (19%)
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
H QQ+H V+ G + ++L + YI + A F+ P +++
Sbjct: 22 HTQQVHAKVIIHGFEDEVVLGSSLTNAYI---------QSNRLDFATSSFNRIPCWKRNR 72
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
SW T+++GY ++ + LL +N M + H
Sbjct: 73 HSWNTILSGYSKSKTCCYSDVLL---------LYNRM------------------RRHCD 105
Query: 278 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 337
G+ D + I A GL G +H ++ + ++ V +L+ Y + G
Sbjct: 106 GV--DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY----VAPSLVEMYAQLGT 159
Query: 338 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
+ A++VFD++PVR+ V W ++ GY+ + E +F
Sbjct: 160 MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF 198
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 25/315 (7%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP-DPFSFSTVLGAMSLIAEEEWHCQQLH 163
IS + +Y++ + A+ LF++M P D FS L + + A +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCA-AAFRPVLGGSVH 71
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
VK + P V LL Y C S ++ ARKLFDE P Q++ W M
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLS---------VSHARKLFDEIP--QRNAVVWNAM 120
Query: 224 IAGYVRNDDLASARKLLDGM-THPIAVAWNAMISGYV--RHGLYEEAFDTFRKMHSMGIQ 280
I+ Y + A +L + M P ++NA+I G V G Y A + +RKM +
Sbjct: 121 ISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFK 179
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ T +L+SA G F +++H+Y R +++P + + L+ Y +CG +V
Sbjct: 180 PNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ----LKSGLVEAYGRCGSIVY 235
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAE 396
+ VFD M RD+V+W++++S Y E A F+E+ + + + ++ +
Sbjct: 236 VQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH 295
Query: 397 SGFGEESLKLFNQMK 411
+G +E+L F +M+
Sbjct: 296 AGLADEALVYFKRMQ 310
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 166/400 (41%), Gaps = 62/400 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L ++HAH + + F P + L+D+Y K ++ +A LFD+ P + ++S Y
Sbjct: 65 VLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHY 124
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG-HAAVKLFVRMKRDGFAPDPF 140
+ G VK A +L+ A V ++ S+NA++K DG + A++ + +M F P+
Sbjct: 125 THCGKVKEAVELYEAMDVMPNES-SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ ++ A S I +++H + + P + + L+ Y C S V+
Sbjct: 184 TLLALVSACSAIGAFRL-IKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQ----- 237
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
+FD + +D +W+++I S Y
Sbjct: 238 ----LVFDS--MEDRDVVAWSSLI-------------------------------SAYAL 260
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-----RQLHAYVLRTVVQ 315
HG E A TF++M + D+ + +++ A + GL + R Y LR
Sbjct: 261 HGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRA--- 317
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV-SWNAILSGYINARRLEEAKF 374
+H+ + L+ ++ G+ +A +V MP + +W A+L N +E A+
Sbjct: 318 SKDHY-----SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 375 IFRE---VPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
RE V N + ++ G EE+ +L +MK
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMK 412
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 159/392 (40%), Gaps = 90/392 (22%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
+DS LF Q S + L + H H++ + + N L+++YCK + +A
Sbjct: 45 LDSEGYKILF--QTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFAR 102
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
LFD+ P R+ IS+N+++ Y+
Sbjct: 103 QLFDRMPE---------------------------------RNIISFNSLISGYTQMGFY 129
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A++LF+ + D F+++ LG + + + LH VV G+ ++N
Sbjct: 130 EQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINV 188
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y C + A LFD ++D+
Sbjct: 189 LIDMYSKCGK---------LDQAMSLFDRC--DERDQ----------------------- 214
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA---SFNTG 297
V+WN++ISGYVR G EE + KMH G+ + Y S++ A + N G
Sbjct: 215 --------VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
G +H Y + ++ F + V AL+ Y K G L +A ++F MP +++V++N
Sbjct: 267 FIEKGMAIHCYTAKLGME----FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYN 322
Query: 358 AILSGYINARRL-----EEAKFIFREVPERNL 384
A++SG++ + EA +F ++ R L
Sbjct: 323 AMISGFLQMDEITDEASSEAFKLFMDMQRRGL 354
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 157/391 (40%), Gaps = 81/391 (20%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAG 85
AIH + G ++R L+D+Y K+ ++ A LF P+ ++ + ++S +
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF---- 328
Query: 86 NVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
D I+ A +A+ KLF+ M+R G P P +FS V
Sbjct: 329 --------------LQMDEITDEASSEAF----------KLFMDMQRRGLEPSPSTFSVV 364
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
L A S E+ +Q+H + K + S L+E LM S
Sbjct: 365 LKACSAAKTLEYG-RQIHALICKNNFQSDEFI------------GSALIELYALMGSTED 411
Query: 206 LFD-EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 264
A S++D SWT+MI +V+N+ L
Sbjct: 412 GMQCFASTSKQDIASWTSMIDCHVQNEQL------------------------------- 440
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 324
E AFD FR++ S I+ +EYT + ++SA + + G Q+ Y +++ + SV
Sbjct: 441 ESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDA----FTSV 496
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP---- 380
+ I+ Y K G + A +VF ++ D+ +++A++S EA IF +
Sbjct: 497 KTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
Query: 381 ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ N + ++ G + LK F MK
Sbjct: 557 KPNQQAFLGVLIACCHGGLVTQGLKYFQCMK 587
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 71/354 (20%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
DI+ + +L+ Y G + A K+F PV RD +S+ ++ ++ A+ F +
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPV--RDVVSWTGIITGFTRTGLYKEALDTFSK 197
Query: 130 MKRDGFAPDPFSFSTVL------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
M + P+ ++ VL G +SL + +H ++K + N L+
Sbjct: 198 MDVE---PNLATYVCVLVSSGRVGCLSL-------GKGIHGLILKRASLISLETGNALID 247
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y+ C ++ A ++F E L +KD+
Sbjct: 248 MYVKCEQ---------LSDAMRVFGE--LEKKDK-------------------------- 270
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCG 302
V+WN+MISG V +EA D F M S GI+ D + TS++SA + G + G
Sbjct: 271 -----VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
R +H Y+L ++ H + A++ Y KCG + A E+F+ + +++ +WNA+L G
Sbjct: 326 RWVHEYILTAGIKWDTH----IGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG 381
Query: 363 Y-INARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
I+ LE ++ F E+ + NL+T+ ++ +G +E + F++MK
Sbjct: 382 LAIHGHGLESLRY-FEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK 434
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
++N ++S Y ++ S G D +T+ + A G+Q+H V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+ + V N+L+ FY CG+ A +VF +MPVRD+VSW I++G+
Sbjct: 133 TKMGFYDD----IYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 370 EEAKFIFREVP-ERNLLTWTVMI 391
+EA F ++ E NL T+ ++
Sbjct: 189 KEALDTFSKMDVEPNLATYVCVL 211
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 130/355 (36%), Gaps = 86/355 (24%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+L + IH IL ++ N LID+Y K + A +F +
Sbjct: 221 SLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK------------- 267
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK-RDGFAPDPF 140
+D +S+N+M+ H A+ LF M+ G PD
Sbjct: 268 --------------------KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
++VL A + + + H + +H ++ G+ + ++ Y C
Sbjct: 308 ILTSVLSACASLGAVD-HGRWVHEYILTAGIKWDTHIGTAIVDMYAKC------------ 354
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
GY+ +A ++ +G+ WNA++ G
Sbjct: 355 -------------------------GYIE-----TALEIFNGIRSKNVFTWNALLGGLAI 384
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ-LHAYVLR--TVVQPS 317
HG E+ F +M +G + + T+ + ++A +TGL + GR+ H R +
Sbjct: 385 HGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKL 444
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEE 371
EH+ +I + G L +A E+ MPV+ D+ AILS N L E
Sbjct: 445 EHY-----GCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLME 494
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 161/369 (43%), Gaps = 70/369 (18%)
Query: 17 PSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTT 76
P + T + + + I FRL L+ RLI+ FD P+ +++ +
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIE--------------FDIEPDSVLYN--S 102
Query: 77 LLSAYSAAGNVKLAEKLFNATP-VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
L+S YS +G+ AE +F RD +S++AM+ Y +N A+K+FV G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 136 APDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
P+ + ++ V+ A S + D V G + + ++ T E
Sbjct: 163 VPNDYCYTAVIRACS------------NSDFVGVGRVTLGFLMKT-----------GHFE 199
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD-LASARKLLDGMTHPIAVAWNAM 254
S V + ++I +V+ ++ +A K+ D M+ V W M
Sbjct: 200 SDVCVG-------------------CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I+ ++ G EA F M G + D++T +S+ SA + G+QLH++ +R+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-- 298
Query: 315 QPSEHFILSVNNALITFYTKC---GKLVQAREVFDKMPVRDLVSWNAILSGYI-NARRLE 370
+ V +L+ Y KC G + R+VFD+M ++SW A+++GY+ N
Sbjct: 299 ----GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 371 EAKFIFREV 379
EA +F E+
Sbjct: 355 EAINLFSEM 363
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 55/335 (16%)
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD-GHAAVKLFVRMKRDG-FAPDP 139
SA G+V K+F+ + +S+ A++ Y N + A+ LF M G P+
Sbjct: 316 SADGSVDDCRKVFD--RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 140 FSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
F+FS+ A +++ +Q+ K G+ SV N+++S +
Sbjct: 374 FTFSSAFKACGNLSDPRVG-KQVLGQAFKRGLASNSSVANSVISMF-------------- 418
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
V++D + A++ + ++ V++N + G
Sbjct: 419 ----------------------------VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
R+ +E+AF ++ + + +T+ SL+S N G G Q+H+ V++ + ++
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ- 509
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN----ARRLEEAKFI 375
V NALI+ Y+KCG + A VF+ M R+++SW ++++G+ R LE +
Sbjct: 510 ---PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 376 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
E + N +T+ ++S + G E + FN M
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 182/442 (41%), Gaps = 57/442 (12%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
MDS T ++L + + + L + +HA ++ ++ N LI +Y KS + A
Sbjct: 60 MDSVTFSSLLKSCIR--ARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 61 HLFD---KTPNPDIFSRTTLLSAYSAAGNVKLAEKLF------NATPVTLRDTISYNAMV 111
+F+ + D+ S + +++ Y G A K+F P + Y A++
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP----NDYCYTAVI 173
Query: 112 KAYSH-NLDGHAAVKLFVRMKR--------------DGFAPDPFSFST---VLGAMSLIA 153
+A S+ + G V L MK D F SF V MS +
Sbjct: 174 RACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN 233
Query: 154 EEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA--------RK 205
W C + + + L+ +LS + S S V A A ++
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGF---ESDKFTLSSVFSACAELENLSLGKQ 290
Query: 206 LFD---EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH- 261
L + L E S M A + + RK+ D M ++W A+I+GY+++
Sbjct: 291 LHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Query: 262 GLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
L EA + F +M + G ++ + +T++S A N G+Q+ + + +
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS-- 408
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
SV N++I+ + K ++ A+ F+ + ++LVS+N L G E+A + E+
Sbjct: 409 --SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 381 ERNL----LTWTVMISGLAESG 398
ER L T+ ++SG+A G
Sbjct: 467 ERELGVSAFTFASLLSGVANVG 488
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 146/343 (42%), Gaps = 56/343 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+++S + + ++ A++ F + ++ ++ +SYN + NL+ A KL +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFES--LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
F+F+++L ++ + +Q+H VVK G+ C
Sbjct: 470 LGVSAFTFASLLSGVANVGSIR-KGEQIHSQVVKLGLSC--------------------- 507
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
++P +I+ Y + + +A ++ + M + ++W +M
Sbjct: 508 ---------------------NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTV 313
I+G+ +HG +TF +M G++ +E TY +++SA + GL + G R ++
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 314 VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEE 371
++P EH+ ++ + G L A E + MP + D++ W L E
Sbjct: 607 IKPKMEHYA-----CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
Query: 372 AKFIFREVPER--NLLTWTVMISGL-AESGFGEESLKLFNQMK 411
K R++ E N + +S + A +G EES ++ +MK
Sbjct: 662 GKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK 704
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 278 GIQ-MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
GI+ MD T++SL+ + F G+ +HA ++ ++P + N+LI+ Y+K G
Sbjct: 56 GIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS----VLYNSLISLYSKSG 111
Query: 337 KLVQAREVFDKM---PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTV 389
+A +VF+ M RD+VSW+A+++ Y N R +A +F E E L+ +T
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 390 MISGLAESGF 399
+I + S F
Sbjct: 172 VIRACSNSDF 181
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 35/185 (18%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y D+ASA K+ D M VAWN++I+G+ +G EEA + +M+S GI+ D +T
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
SL+SA G G+++H Y+++ + + H +N L+ Y +CG++ +A+ +FD
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH----SSNVLLDLYARCGRVEEAKTLFD 148
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
+M ++ VS WT +I GLA +GFG+E+++L
Sbjct: 149 EMVDKNSVS-------------------------------WTSLIVGLAVNGFGKEAIEL 177
Query: 407 FNQMK 411
F M+
Sbjct: 178 FKYME 182
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 60/298 (20%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
I+ + +LL Y+ G+V A K+F+ P +D +++N+++ ++ N A+ L+ M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVINGFAENGKPEEALALYTEM 80
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
G PD F+ ++L A + I +++H ++K G+ N LL Y C
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLG-KRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----- 245
+ A+ LFDE + K+ SWT++I G N A +L M
Sbjct: 140 ---------VEEAKTLFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P + + ++ G+ +E F+ FR+M +EY
Sbjct: 189 PCEITFVGILYACSHCGMVKEGFEYFRRMR------EEYK-------------------- 222
Query: 306 HAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
++P EHF ++ + G++ +A E MP++ ++V W +L
Sbjct: 223 --------IEPRIEHF-----GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G +H+ V+R+ ++ V N+L+ Y CG + A +VFDKMP +DLV+WN++++
Sbjct: 7 GETIHSVVIRSGFGS----LIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 362 GYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESG 398
G+ + EEA ++ E+ + + T ++S A+ G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 103
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 59/354 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVK----LAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVK 125
+ ++ + LL+A+ N+ A +F++ + + ++ Y+ M++ S + H ++
Sbjct: 42 NTYAISKLLTAFLHLPNLNKHFHYASSIFDS--IEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 126 LF---VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
F V+ + + AP +F ++ A L A +Q+HC VVK GV
Sbjct: 100 YFLLMVKEEEEDIAPSYLTFHFLIVA-CLKACFFSVGKQIHCWVVKNGVF---------- 148
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
S + V++ VL YV + L ARK+ D
Sbjct: 149 ------LSDSHVQTGVLRI-------------------------YVEDKLLLDARKVFDE 177
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
+ P V W+ +++GYVR GL E + FR+M G++ DE++ T+ ++A G G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
+ +H +V + S+ F V AL+ Y KCG + A EVF K+ R++ SW A++ G
Sbjct: 238 KWIHEFVKKKSWIESDVF---VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGG 294
Query: 363 YINARRLEEAKFIFREVP-ERNLLTWTVMISGL----AESGFGEESLKLFNQMK 411
Y ++A + E + +V++ G+ A GF EE + M+
Sbjct: 295 YAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENME 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 129/323 (39%), Gaps = 64/323 (19%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D +T +L Y + A K+F+ P D + ++ ++ Y G +++F
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFRE 208
Query: 130 MKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
M G PD FS +T L A + +A+ +W +H V K
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKW----IHEFVKK------------------ 246
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
+ +ES V + +A ++ Y + + +A ++ +T
Sbjct: 247 ----KSWIESDVFVGTA-------------------LVDMYAKCGCIETAVEVFKKLTRR 283
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQ- 304
+W A+I GY +G ++A ++ GI+ D +++A + G GR
Sbjct: 284 NVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSM 343
Query: 305 LHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 362
L R + P EH+ + ++ + G+L A + +KMP++ L S W A+L+G
Sbjct: 344 LENMEARYEITPKHEHY-----SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 363 YINARRLEEAKFIFREVPERNLL 385
+ +E E+ +NLL
Sbjct: 399 CRTHKNVE-----LGELAVKNLL 416
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 164/402 (40%), Gaps = 86/402 (21%)
Query: 14 LNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFS 73
L S+ + IHA +L TGF + +L++ ++ YA +FD+ P IF
Sbjct: 17 LRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFL 76
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
TL Y +R+ + + +++ L+ +M+
Sbjct: 77 WNTLFKGY-------------------VRNQLPFESLL--------------LYKKMRDL 103
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
G PD F++ V+ A+S + + + C LH VVK+G C+ V
Sbjct: 104 GVRPDEFTYPFVVKAISQLGD--FSCGFALHAHVVKYGFGCLGIVA-------------- 147
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
T ++ Y++ +L+SA L + M VAWN
Sbjct: 148 ----------------------------TELVMMYMKFGELSSAEFLFESMQVKDLVAWN 179
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
A ++ V+ G A + F KM + +Q D +T S++SA G G +++ +
Sbjct: 180 AFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKE 239
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 372
+ + + V NA + + KCG AR +F++M R++VSW+ ++ GY EA
Sbjct: 240 EIDCN----IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREA 295
Query: 373 KFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+F + N +T+ ++S + +G E + F+ M
Sbjct: 296 LTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T ++ YV + L ARK+ D + P V W+ +++GYVR GL E + F++M GI+
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
DE++ T+ ++A G G+ +H +V + S+ F V AL+ Y KCG +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF---VGTALVDMYAKCGCIET 272
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-ERNLLTWTVMISGL----A 395
A EVF+K+ R++ SW A++ GY ++A + E + +V++ G+ A
Sbjct: 273 AVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACA 332
Query: 396 ESGFGEESLKLFNQMK 411
GF EE + M+
Sbjct: 333 HGGFLEEGRTMLENME 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 123/303 (40%), Gaps = 64/303 (21%)
Query: 90 AEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA- 148
A K+F+ P D + ++ ++ Y G +++F M G PD FS +T L A
Sbjct: 171 ARKVFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTAC 228
Query: 149 --MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ +A+ +W +H V K +ES V + +A
Sbjct: 229 AQVGALAQGKW----IHEFVKK----------------------KRWIESDVFVGTA--- 259
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
++ Y + + +A ++ + +T +W A+I GY +G ++
Sbjct: 260 ----------------LVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 267 AFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGR-QLHAYVLRTVVQPS-EHFILS 323
A ++ GI+ D +++A + G GR L R + P EH+
Sbjct: 304 ATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY--- 360
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEEAKFIFREVPER 382
+ ++ + G+L A ++ +KMP++ L S W A+L+G + +E E+ +
Sbjct: 361 --SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVE-----LGELAVQ 413
Query: 383 NLL 385
NLL
Sbjct: 414 NLL 416
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
T+ LI A F+ G+Q+H +V++ V S+ V ++ Y + L AR+V
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDG---HVQTGVLRIYVEDKLLFDARKV 174
Query: 345 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
FD++P D+V W+ +++GY+ E +F+E+ R +
Sbjct: 175 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI 214
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 60/362 (16%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAH------HLFDKTPNPDIFSRTTLLSAYSAA 84
+L G R + ++ + CK N + + + D F +T L+ Y
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 85 GNVKLAEKLFNATPVTLRD---TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
G A ++F V + D + +N M+ + + +++ L++ K + S
Sbjct: 219 GLSIDAWRVF----VEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
F+ LGA S +E +Q+HCDVVK G+ P V +LLS Y C ++
Sbjct: 275 FTGALGACSQ-SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG---------MVG 324
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
A +F + + K W M+A Y ND GY
Sbjct: 325 EAETVF--SCVVDKRLEIWNAMVAAYAEND------------------------YGY--- 355
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
A D F M + D +T +++IS GL+N G+ +HA + + +Q +
Sbjct: 356 ----SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS--- 408
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
++ +AL+T Y+KCG A VF M +D+V+W +++SG + +EA +F ++ +
Sbjct: 409 -TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKD 467
Query: 382 RN 383
+
Sbjct: 468 DD 469
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 158/364 (43%), Gaps = 64/364 (17%)
Query: 63 FDKTPNPDIFSR---------TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKA 113
+ K+ + ++F R + LL+ YS G A +F + + +D +++ +++
Sbjct: 391 YGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS--MEEKDMVAWGSLISG 448
Query: 114 YSHNLDGHAAVKLFVRMKRD--GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV 171
N A+K+F MK D PD ++V A + + + Q +H ++K G+
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ-VHGSMIKTGL 507
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
VLN + S+L++ L+ + L +
Sbjct: 508 -----VLNVFVG-------SSLID----------LYSKCGLPEM---------------- 529
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
A K+ M+ VAWN+MIS Y R+ L E + D F M S GI D + TS++
Sbjct: 530 ----ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
A +T G+ LH Y LR + H + NALI Y KCG A +F KM +
Sbjct: 586 AISSTASLLKGKSLHGYTLRLGIPSDTH----LKNALIDMYVKCGFSKYAENIFKKMQHK 641
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLF 407
L++WN ++ GY + A +F E+ + + +T+ +IS SGF EE +F
Sbjct: 642 SLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF 701
Query: 408 NQMK 411
MK
Sbjct: 702 EFMK 705
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 58/349 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++F ++L+ YS G ++A K+F T ++ + +++N+M+ YS N ++ LF
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVF--TSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M G PD S ++VL A+S A + LH ++ G+ + N L+ Y+ C
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTA-SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S E+ +F + + K +W MI GY + D +A L D
Sbjct: 627 FSKYAEN---------IFKK--MQHKSLITWNLMIYGYGSHGDCITALSLFD-------- 667
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+M G D+ T+ SLISA ++G G+ + ++
Sbjct: 668 -----------------------EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM 704
Query: 310 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINA 366
+ ++P+ EH+ ++ + G L +A MP+ D W +LS
Sbjct: 705 KQDYGIEPNMEHYA-----NMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH 759
Query: 367 RRLE----EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+E A+ + R PER T+ +I+ E+G E+ KL MK
Sbjct: 760 HNVELGILSAEKLLRMEPERG-STYVQLINLYMEAGLKNEAAKLLGLMK 807
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 75/282 (26%)
Query: 131 KRDGFAP---DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
K DG +P F+F ++L A S + + + +H VV G P + +L++ Y+
Sbjct: 49 KHDGSSPFWTSVFTFPSLLKACSALTNLSYG-KTIHGSVVVLGWRYDPFIATSLVNMYVK 107
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C + A ++FD G+ ++ SAR +
Sbjct: 108 CG---------FLDYAVQVFD-----------------GWSQSQSGVSARDV-------- 133
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF--NCGRQL 305
WN+MI GY + ++E FR+M G++ D ++ + ++S G F G+Q+
Sbjct: 134 -TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQI 192
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
H ++LR + ++ F+ ALI Y K G + A VF + + D
Sbjct: 193 HGFMLRNSLD-TDSFL---KTALIDMYFKFGLSIDAWRVF--VEIED------------- 233
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLF 407
+ N++ W VMI G SG E SL L+
Sbjct: 234 ---------------KSNVVLWNVMIVGFGGSGICESSLDLY 260
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLF 299
D P ++ N+ I ++ G Y +A + K S +T+ SL+ A
Sbjct: 19 DSYISPASI--NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNL 76
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK-------MPVRD 352
+ G+ +H +VV + + +L+ Y KCG L A +VFD + RD
Sbjct: 77 SYGKTIHG----SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARD 132
Query: 353 LVSWNAILSGYINARRLEEAKFIFREV 379
+ WN+++ GY RR +E FR +
Sbjct: 133 VTVWNSMIDGYFKFRRFKEGVGCFRRM 159
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 195/453 (43%), Gaps = 94/453 (20%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N LI+ +C+ S +P A + K PDI + ++LL+ Y + A L + V
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 100 T--LRDTISYNAMVKA-YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLG--------- 147
+T+++N ++ + HN AV L RM G PD F++ TV+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHN-KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 148 -AMSLIAEEEWHCQQLHCDVVKW----GVMC--------------------VPSVL--NT 180
A+SL+ + E ++ DVV + +C P+V+ N+
Sbjct: 238 LALSLLKKMEKG--KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 181 LLSCYIC------------------------CASSTLVESPVL---MASARKLFDEAPLS 213
L+ C +C S L+++ V + A KL+DE +
Sbjct: 296 LIRC-LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IK 353
Query: 214 QKDEP---SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEE 266
+ +P +++++I G+ +D L A+ + + M P V +N +I G+ + EE
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
+ FR+M G+ + TY +LI F G + +++ ++ V P + +
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD----IITYS 469
Query: 327 ALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER 382
L+ K GKL +A VF+ + D+ ++N ++ G A ++E+ +F + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 383 ----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
N++ +T MISG G EE+ LF +MK
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 24/265 (9%)
Query: 46 LIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--ATPV 99
LID + K + A L+D ++ +PDIF+ ++L++ + + A+ +F +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
+ ++YN ++K + ++LF M + G + +++T++ + + +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM-A 449
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP- 218
Q++ +V GV P ++ + C L ++ V+ +K K EP
Sbjct: 450 QKIFKKMVSDGV--PPDIITYSILLDGLCKYGKLEKALVVFEYLQK--------SKMEPD 499
Query: 219 --SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFR 272
++ MI G + + L ++ P + + MISG+ R GL EEA FR
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 273 KMHSMGIQMDEYTYTSLISASFNTG 297
+M G + TY +LI A G
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 160/391 (40%), Gaps = 69/391 (17%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNA 96
+I +ID C N+ A +LF + N P++ + +L+ G A +L
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL-- 313
Query: 97 TPVTLR----DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL- 151
+ + R + ++++A++ A+ A KL+ M + PD F++S+++ +
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 152 -IAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMASARKLFD 208
+E H +L C P+V+ NTL+ + C + + E +LF
Sbjct: 374 DRLDEAKHMFELM-----ISKDCFPNVVTYNTLIKGF--CKAKRVEE-------GMELFR 419
Query: 209 EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAF 268
E +SQ+ G V N V +N +I G + G + A
Sbjct: 420 E--MSQR----------GLVGN-----------------TVTYNTLIQGLFQAGDCDMAQ 450
Query: 269 DTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNAL 328
F+KM S G+ D TY+ L+ G + Y+ ++ ++P + N +
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD----IYTYNIM 506
Query: 329 ITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
I K GK+ ++F + ++ +++ + ++SG+ EEA +FRE+ E
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 385 L----TWTVMISGLAESGFGEESLKLFNQMK 411
L T+ +I G S +L +M+
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 163/371 (43%), Gaps = 69/371 (18%)
Query: 54 SNIPYAHHLFDKTPNPDIFSRTTLLS-AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVK 112
N+ +H+L+ + + F R + LS A + G K+ + + + VTL N+++
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILG--KMMKLGYGPSIVTL------NSLLN 153
Query: 113 AYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVM 172
+ H AV L +M G+ PD +F+T++
Sbjct: 154 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV-------------------------- 187
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
+ L + LVE V+ Q D ++ +I G + +
Sbjct: 188 ------HGLFQHNKASEAVALVERMVVKGC-----------QPDLVTYGAVINGLCKRGE 230
Query: 233 LASARKLLD----GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 288
A LL+ G V +N +I G ++ ++AFD F KM + GI+ D +TY
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
LIS N G ++ +L + +L + P F NALI + K GKLV+A +++D+M
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFF----NALIDAFVKEGKLVEAEKLYDEM 346
Query: 349 PVR-----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGF 399
D+V++N ++ G+ +R+EE +FRE+ +R N +T+T +I G ++
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 400 GEESLKLFNQM 410
+ + +F QM
Sbjct: 407 CDNAQMVFKQM 417
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 175/424 (41%), Gaps = 61/424 (14%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTL 77
+LA AI ++ G+ + + N L++ +C + I A L D+ PD + TTL
Sbjct: 127 SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 78 LSAY----SAAGNVKLAEKLF--NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
+ A+ V L E++ P D ++Y A++ + A+ L +M+
Sbjct: 187 VHGLFQHNKASEAVALVERMVVKGCQP----DLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD--------VVKWGVMCVPSVLNTLLS 183
+ D ++T++ + C+ H D + G+ N L+S
Sbjct: 243 KGKIEADVVIYNTIIDGL---------CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS---WTTMIAGYVRNDDLASARKLL 240
C C ++ L++ L + P + +I +V+ L A KL
Sbjct: 294 CL--CNYGRWSDASRLLSDM--------LEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 241 DGMTH-----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
D M P VA+N +I G+ ++ EE + FR+M G+ + TYT+LI F
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL-- 353
+C V + +V H + N L+ G + A VF+ M RD+
Sbjct: 404 AR--DCDNA--QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 354 --VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLF 407
V++ ++ A ++E+ +F + + N++T+T M+SG G EE+ LF
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 408 NQMK 411
+MK
Sbjct: 520 VEMK 523
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 109/284 (38%), Gaps = 35/284 (12%)
Query: 33 TTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF----DKTPNPDIFSRTTLLSAYSAAGNVK 88
T G + N LI C A L +K NPD+ L+ A+ G +
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 89 LAEKLFN---ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
AEKL++ + D ++YN ++K + +++F M + G + +++T+
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLS--CYICCASSTLVESPVLMASA 203
+ A + + Q + +V GV N LL C + LV +
Sbjct: 398 IHGF-FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG----------MTHPIAVAWNA 253
KL D ++TTMI L A K+ DG P V +
Sbjct: 457 MKL---------DIVTYTTMIEA------LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
M+SG+ R GL EEA F +M G + TY +LI A G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 162/427 (37%), Gaps = 64/427 (14%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D+ T L H A++ A A+ ++ G + + +I+ CK A +
Sbjct: 179 DTVTFTTLVHGLFQHNKASE--AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 62 LFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYS 115
L +K D+ T++ ++ A LFN T D +YN ++
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCV 174
+ A +L M PD F+ ++ A + E + ++L+ ++VK C
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDA--FVKEGKLVEAEKLYDEMVK-SKHCF 353
Query: 175 PSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
P V+ NTL+ + C + E M R++ + + ++TT+I G+ + D
Sbjct: 354 PDVVAYNTLIKGF--CKYKRVEEG---MEVFREMSQRGLVG--NTVTYTTLIHGFFQARD 406
Query: 233 LASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 288
+A+ + M HP + +N ++ G +G E A F M +++D TYT+
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 289 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+I A G G L + V+P
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKP-------------------------------- 494
Query: 349 PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESL 404
++V++ ++SG+ EEA +F E+ E L T+ +I G S
Sbjct: 495 ---NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 405 KLFNQMK 411
+L +M+
Sbjct: 552 ELIKEMR 558
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 158/353 (44%), Gaps = 35/353 (9%)
Query: 77 LLSAYSAAGNVKLAEKLFNA---TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
++S G V A +FN +L D SY +++ A++++ AV +F +M+ D
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSL-DVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G P +++ +L + L + G+ NTL++C C +L
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC---CKRGSL 294
Query: 194 VESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPI 247
+ A ++F+E + D+ ++ ++ Y ++ A K+L+ M P
Sbjct: 295 HQE------AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V +N++IS Y R G+ +EA + +M G + D +TYT+L+S G +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSWNAILSGY 363
+ +P+ + NA I Y GK + ++FD++ V D+V+WN +L+ +
Sbjct: 409 EMRNAGCKPN----ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 364 INARRLEEAKFIFRE------VPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
E +F+E VPER T+ +IS + G E+++ ++ +M
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRM 515
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 147/371 (39%), Gaps = 53/371 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYA----HHLFDKTPNPDIFSRTTLLS 79
A + ++ GF + + N LI Y + + A + + +K PD+F+ TTLLS
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 80 AYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ AG V+ A +F + ++NA +K Y + +K+F + G +P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D +++T+L + + ++ + G + NTL+S Y C S
Sbjct: 453 DIVTWNTLLAVFGQNGMDS-EVSGVFKEMKRAGFVPERETFNTLISAYSRCGS------- 504
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
F++A + R++LD P +N +++
Sbjct: 505 ---------FEQA----------------------MTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
R G++E++ +M + +E TY SL+ A N L V V++P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAK 373
+ L+ +KC L +A F ++ R D+ + N+++S Y + + +A
Sbjct: 594 AVLL----KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 374 FIFREVPERNL 384
+ + ER
Sbjct: 650 GVLDYMKERGF 660
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 219 SWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGYVRHGL-YEEAFDTFRK 273
S+T++I+ + + A +K+ + P + +N +++ + + G + + K
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
M S GI D YTY +LI+ L Q A V + + NAL+ Y
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSL----HQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 334 KCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLL 385
K + +A +V ++M + +V++N+++S Y L+EA + ++ E+ ++
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 386 TWTVMISGLAESGFGEESLKLFNQMK 411
T+T ++SG +G E ++ +F +M+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMR 411
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 171/417 (41%), Gaps = 77/417 (18%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTLLS 79
A +I + G + N I +Y +FD+ +PDI + TLL+
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 80 AYSAAGNVKLAEKLFN----ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+ G +F A V R+T +N ++ AYS A+ ++ RM G
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERET--FNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 136 APDPFSFSTVLGAMS----------LIAEEE---------WHCQQLHCDVVKWGVMCVPS 176
PD +++TVL A++ ++AE E +C LH + + S
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAP--LSQKDE----PSWTT---MIAGY 227
+ + S I + L+++ VL+ S L EA S+ E P TT M++ Y
Sbjct: 581 LAEEVYSGVIE-PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 228 VRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 283
R +A A +LD M P +N+++ + R + ++ + R++ + GI+ D
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 284 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA-----LITFYTKCGKL 338
+Y ++I +AY T ++ + + N+ +IT+ T G
Sbjct: 700 ISYNTVI---------------YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 339 VQAREVFDKM--PVRDLV---------SWNAILSGYINARRLEEAKFIFREVPERNL 384
A +F++ VR ++ ++N+I+ GY R +EAK ++ RNL
Sbjct: 745 A-ADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL--RNL 798
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 162/394 (41%), Gaps = 88/394 (22%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
R IH+H++ G + HH P IF+ A S
Sbjct: 22 RKIHSHVIINGLQ----------------------HH-------PSIFNHLLRFCAVSVT 52
Query: 85 GNVKLAEKLFN---ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA-PDPF 140
G++ A+ LF+ + P T +N +++ +S++ ++ + RM + PD F
Sbjct: 53 GSLSHAQLLFDHFDSDP----STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLF 108
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+F+ L + I C ++H V++ G +
Sbjct: 109 TFNFALKSCERIKSIP-KCLEIHGSVIRSGFL---------------------------- 139
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
D+A ++ T+++ Y N + A K+ D M V+WN MI +
Sbjct: 140 -------DDAIVA-------TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
GL+ +A +++M + G+ D YT +L+S+ + N G LH R
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----RIACDIRCES 241
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIFREV 379
+ V+NALI Y KCG L A VF+ M RD+++WN+++ GY ++ +E F + V
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 380 PER---NLLTWTVMISGLAESGFGEESLKLFNQM 410
N +T+ ++ G + G +E ++ F M
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIM 335
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 57/317 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D T+L+ YSA G+V++A K+F+ PV RD +S+N M+ +SH + A+ ++ R
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPV--RDLVSWNVMICCFSHVGLHNQALSMYKR 198
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M +G D ++ +L + + H + GVM ++C I C
Sbjct: 199 MGNEGVCGDSYTLVALLSSCA------------HVSALNMGVML------HRIACDIRC- 239
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
ES V +++A +I Y + L +A + +GM +
Sbjct: 240 -----ESCVFVSNA-------------------LIDMYAKCGSLENAIGVFNGMRKRDVL 275
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
WN+MI GY HG EA FRKM + G++ + T+ L+ + GL G + H +
Sbjct: 276 TWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEI 334
Query: 310 LRTVVQPSEHFILSVN----NALITFYTKCGKLVQARE-VFDKMPVRDLVSWNAILSGYI 364
+ S F L+ N ++ Y + G+L + E ++ D V W +L
Sbjct: 335 M------SSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCK 388
Query: 365 NARRLEEAKFIFREVPE 381
R LE + +++ +
Sbjct: 389 IHRNLELGEVAMKKLVQ 405
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 160/353 (45%), Gaps = 64/353 (18%)
Query: 75 TTLLSAYSAAGNVKLAEKLFN-ATPVTLRDTI-SYNAMVKAYSHNLDGHAAVKLFVRMKR 132
+ ++S G V +A+++F A +T+ +++A++ AY + A+ +F MK
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 133 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
G P+ +++ V+ A E + ++ + GV N+LL+ C+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAV---CSRGG 353
Query: 193 LVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGM----THP 246
L E+ AR LFDE ++D S+ T++ + + A ++L M P
Sbjct: 354 LWEA------ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP 407
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V+++ +I G+ + G ++EA + F +M +GI +D +Y
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY-------------------- 447
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSWNAILSG 362
N L++ YTK G+ +A ++ +M +D+V++NA+L G
Sbjct: 448 -------------------NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 363 YINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
Y + +E K +F E+ NLLT++ +I G ++ G +E++++F + K
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 113/284 (39%), Gaps = 53/284 (18%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N L+ + + A +LFD+ N D+FS TLL A G + LA ++ PV
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 100 T--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
+ + +SY+ ++ ++ A+ LF M+ G A D S++T+L + + E
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
+L + S I +KD
Sbjct: 463 ALD----------------ILREMASVGI---------------------------KKDV 479
Query: 218 PSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRK 273
++ ++ GY + +K+ M P + ++ +I GY + GLY+EA + FR+
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 274 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
S G++ D Y++LI A GL L + + + P+
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 156/343 (45%), Gaps = 56/343 (16%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG-HAAVKLFVRMKRD 133
L++ Y+ G + K+F++ P D +S+N+++ A + + AV F+ +R
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPE--HDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G + +FS+VL A+S ++ E +Q+H +K + + N L++CY C
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGE--- 567
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
M K+F R D+ V WN+
Sbjct: 568 ------MDGCEKIFSRMA----------------ERRDN----------------VTWNS 589
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
MISGY+ + L +A D M G ++D + Y +++SA + G ++HA +R
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
++ + V +AL+ Y+KCG+L A F+ MPVR+ SWN+++SGY + EEA
Sbjct: 650 LESD----VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 374 FIFR------EVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F + P + +T+ ++S + +G EE K F M
Sbjct: 706 KLFETMKLDGQTPPDH-VTFVGVLSACSHAGLLEEGFKHFESM 747
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 57/309 (18%)
Query: 62 LFDKTPNPDIFSRTTLLSAY-SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+F + D L+S Y G+V A F + +++++S+N+++ YS D
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFG--DIEVKNSVSWNSIISVYSQAGDQ 187
Query: 121 HAAVKLFVRMKRDGFAPDPFSF-STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
+A ++F M+ DG P ++F S V A SL + +Q+ C + K G++
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL------- 240
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
+ + + S +++ + ++ L+ ARK+
Sbjct: 241 ----------------TDLFVGSG-------------------LVSAFAKSGSLSYARKV 265
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA------S 293
+ M AV N ++ G VR EEA F M+SM I + +Y L+S+ +
Sbjct: 266 FNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLA 324
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
GL GR++H +V+ T + F++ + N L+ Y KCG + AR VF M +D
Sbjct: 325 EEVGLKK-GREVHGHVITTGLVD---FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 354 VSWNAILSG 362
VSWN++++G
Sbjct: 381 VSWNSMITG 389
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 156/342 (45%), Gaps = 59/342 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + L+SA++ +G++ A K+FN + R+ ++ N ++ G A KLF+
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFN--QMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 130 MKRDGFAPDPFSFSTVLGAMS--LIAEEEW--HCQQLHCDVVKWGVM-CVPSVLNTLLSC 184
M P S+ +L + +AEE +++H V+ G++ + + N L++
Sbjct: 300 MN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
Y C S +A AR++ MT
Sbjct: 359 YAKCGS------------------------------------------IADARRVFYFMT 376
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
+V+WN+MI+G ++G + EA + ++ M I +T S +S+ + G+Q
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H L+ + + +SV+NAL+T Y + G L + R++F MP D VSWN+I+
Sbjct: 437 IHGESLKLGIDLN----VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALA 492
Query: 365 NARR-LEEAKFIF----REVPERNLLTWTVMISGLAESGFGE 401
+ R L EA F R + N +T++ ++S ++ FGE
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 57/349 (16%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
L+ + D++ L++AY G+ A K+F+ P LR+ +S+ +V YS N +
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--LRNCVSWACIVSGYSRNGEHK 84
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE-WHCQQLHCDVVKWGVMCVPSVLNT 180
A+ M ++G + ++F +VL A I +Q+H + K V N
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+S Y C S + A F + V+N
Sbjct: 145 LISMYWKCIGS--------VGYALCAFGDIE----------------VKN---------- 170
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
+V+WN++IS Y + G AF F M G + EYT+ SL++ + L
Sbjct: 171 -------SVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTA--CSLTE 221
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
+L ++ T+ + L V + L++ + K G L AR+VF++M R+ V+ N ++
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 361 SGYINARRLEEAKFIFREV-------PERNLLTWTVMISGLAESGFGEE 402
G + + EEA +F ++ PE ++ +++S E EE
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPE----SYVILLSSFPEYSLAEE 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQ---KDEPSWTTMIAGYVRNDDLASARKLLDGMT 244
C + V+S V A + F KD +I Y+ D SARK+ D M
Sbjct: 4 CVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG----LFN 300
V+W ++SGY R+G ++EA R M GI ++Y + S++ A G LF
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF- 122
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC-GKLVQAREVFDKMPVRDLVSWNAI 359
GRQ+H + + S V+N LI+ Y KC G + A F + V++ VSWN+I
Sbjct: 123 -GRQIHGLMFKL----SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSI 177
Query: 360 LSGYINARRLEEAKFIF 376
+S Y A A IF
Sbjct: 178 ISVYSQAGDQRSAFRIF 194
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 193/441 (43%), Gaps = 61/441 (13%)
Query: 12 AQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI 71
A L+H S + H ++ G + ++N+L+ Y K A LFD+ P +I
Sbjct: 47 ASLDHLSDV----KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNI 102
Query: 72 FSRTTLLSAY----------SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
+ L+ + G L+ LF T V+L D +S+ +++ + + +
Sbjct: 103 VTWNILIHGVIQRDGDTNHRAHLGFCYLSRILF--TDVSL-DHVSFMGLIRLCTDSTNMK 159
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQ-LHCDVVKWGVMCVPSV 177
A ++L M + G F ++++ G LI E + L D+V W + V
Sbjct: 160 AGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYV 219
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLF--DEAPLS---------------------- 213
LN ++ + L++ LM S + F D S
Sbjct: 220 LNGMID-----EAFGLLK---LMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVS 271
Query: 214 -QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 272
Q D P T ++ Y +++ L+ AR+ + M V+WNAMI G+ ++G EA F
Sbjct: 272 YQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFG 331
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
+M +Q DE T+ S++S+ +Q+ A V + + S F LSV N+LI+ Y
Sbjct: 332 QMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK---KGSADF-LSVANSLISSY 387
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER---NLLTWTV 389
++ G L +A F + DLVSW +++ + EE+ +F + ++ + +T+
Sbjct: 388 SRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLE 447
Query: 390 MISGLAESGFGEESLKLFNQM 410
++S + G +E L+ F +M
Sbjct: 448 VLSACSHGGLVQEGLRCFKRM 468
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 57/315 (18%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LF + DI T LL+ Y+ + ++ A + F + V R+ +S+NAM+ ++ N +G
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVV--RNVVSWNAMIVGFAQNGEGR 324
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A++LF +M + PD +F++VL + + + W +Q+ V K G SV N+L
Sbjct: 325 EAMRLFGQMLLENLQPDELTFASVLSSCAKFS-AIWEIKQVQAMVTKKGSADFLSVANSL 383
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+S Y RN +L+ A
Sbjct: 384 ISSY------------------------------------------SRNGNLSEALLCFH 401
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+ P V+W ++I HG EE+ F M +Q D+ T+ ++SA + GL
Sbjct: 402 SIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQE 460
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNN----ALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
G LR + +E + + + LI + G + +A +V + MP
Sbjct: 461 G-------LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHAL 513
Query: 358 AILSGYINARRLEEA 372
A +G N E+
Sbjct: 514 AAFTGGCNIHEKRES 528
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 162/393 (41%), Gaps = 85/393 (21%)
Query: 23 LARAIHAHILTT-GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + +HAH+L + + P + + LID+YCK ++ +F +
Sbjct: 334 LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ------------- 380
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
R+ IS+ A++ Y+ N A++ V M+++GF PD +
Sbjct: 381 --------------------RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMA 201
+TVL + + + +++HC +K + S++ +L+ Y C + E P+
Sbjct: 421 IATVLPVCAELRAIK-QGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG---VPEYPI--- 473
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
+LFD L Q++ +WT AMI YV +
Sbjct: 474 ---RLFDR--LEQRNVKAWT-------------------------------AMIDCYVEN 497
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+ FR M + D T +++ + G++LH ++L+ + I
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFES----I 553
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
V+ +I Y KCG L A FD + V+ ++W AI+ Y +A F ++
Sbjct: 554 PFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVS 613
Query: 382 R----NLLTWTVMISGLAESGFGEESLKLFNQM 410
R N T+T ++S +++GF +E+ + FN M
Sbjct: 614 RGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 133/308 (43%), Gaps = 49/308 (15%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F +T+L+ Y G V LA ++F+ + RD + + AM+ +HN A+ LF M
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFDE--IVERDIVVWGAMIAGLAHNKRQWEALGLFRTM 306
Query: 131 -KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+ P+ +T+L + + + +++H V+K
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLG-KEVHAHVLK--------------------- 344
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
S VE P + + +I Y + D+AS R++ G A+
Sbjct: 345 SKNYVEQPFVHSG--------------------LIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+W A++SGY +G +++A + M G + D T +++ G+++H Y
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L+ + P+ +S+ +L+ Y+KCG +FD++ R++ +W A++ Y+ L
Sbjct: 445 LKNLFLPN----VSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL 500
Query: 370 EEAKFIFR 377
+FR
Sbjct: 501 RAGIEVFR 508
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 49/303 (16%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKA--YSHNLDGHAAVKLFVR 129
F RT L+ Y+A G+VK A+K+F+ + T + S+NA+++ S + F
Sbjct: 147 FLRTKLVHMYTACGSVKDAQKVFDES--TSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G + +S S V + + A + H +K G+ + +L+ Y C
Sbjct: 205 MRELGVDLNVYSLSNVFKSFA-GASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG 263
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L AR++FDE + ++D W MIAG N
Sbjct: 264 KVGL---------ARRVFDE--IVERDIVVWGAMIAGLAHNKR----------------- 295
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
W A+ G R + EE I + T+++ + G+++HA+V
Sbjct: 296 QWEAL--GLFRTMISEEK-----------IYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
L++ + F V++ LI Y KCG + R VF R+ +SW A++SGY R
Sbjct: 343 LKSKNYVEQPF---VHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 370 EEA 372
++A
Sbjct: 400 DQA 402
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG--LYEEAFDTFRKMHSMG 278
T ++ Y + A+K+ D T +WNA++ G V G Y++ TF +M +G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
+ ++ Y+ +++ + G + HA ++ + S + + +L+ Y KCGK+
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS----VFLKTSLVDMYFKCGKV 265
Query: 339 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 377
AR VFD++ RD+V W A+++G + +R EA +FR
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFR 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 115/278 (41%), Gaps = 52/278 (18%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
P++ T+L+ YS G + +LF+ + R+ ++ AM+ Y N D A +++F
Sbjct: 451 PNVSLVTSLMVMYSKCGVPEYPIRLFDR--LEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M PD + VL S + + ++LH ++K +P V
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLG-KELHGHILKKEFESIPFV----------- 556
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
SAR +I Y + DL SA D + +
Sbjct: 557 -------------SAR------------------IIKMYGKCGDLRSANFSFDAVAVKGS 585
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+ W A+I Y + L+ +A + F +M S G + +T+T+++S G + +
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNL 645
Query: 309 VLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREV 344
+LR +QPS EH+ L +I +CG++ +A+ +
Sbjct: 646 MLRMYNLQPSEEHYSL-----VIELLNRCGRVEEAQRL 678
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 155/341 (45%), Gaps = 53/341 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
+++Y+ G++ A+++F+ + + S+NA++ ++ + D ++ ++MK G
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHG--IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 491
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD F+ ++L A S + +++H +++ N L
Sbjct: 492 LLPDSFTVCSLLSACSKLKSLRLG-KEVHGFIIR----------NWL------------- 527
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
++D + ++++ Y+ +L + + L D M V+WN +
Sbjct: 528 -------------------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
I+GY+++G + A FR+M GIQ+ + + A GR+ HAY L+ ++
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 374
+ + FI +LI Y K G + Q+ +VF+ + + SWNA++ GY +EA
Sbjct: 629 E-DDAFIAC---SLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 375 IFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F E+ + LT+ +++ SG E L+ +QMK
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 273
+ D+ T +I Y +R + D + WNA+IS Y R+ LY+E +TF +
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 274 MHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
M S + D +TY +I A G +H V++T + + V NAL++FY
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED----VFVGNALVSFY 232
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 383
G + A ++FD MP R+LVSWN+++ + + EE+ + E+ E N
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEEN 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 59/302 (19%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F L+S Y G V A +LF+ P R+ +S+N+M++ +S N + L
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPE--RNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 130 MKR---DG-FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
M DG F PD + TVL + E + +H VK + + N L+ Y
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAR-EREIGLGKGVHGWAVKLRLDKELVLNNALMDMY 337
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C T +A+ +F + K+ SW TM+ G+ D
Sbjct: 338 SKCGCIT---------NAQMIFKMN--NNKNVVSWNTMVGGFSAEGD------------- 373
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG--IQMDEYTYTSLISASFNTGLFNCGR 303
HG FD R+M + G ++ DE T + + F+ +
Sbjct: 374 --------------THG----TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 304 QLHAYVLRTVVQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
+LH Y L+ + F+ + V NA + Y KCG L A+ VF + + + SWNA++
Sbjct: 416 ELHCYSLK------QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 362 GY 363
G+
Sbjct: 470 GH 471
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 50/286 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T+L++ Y+ G ++ A +F + RD YNA++ + N A++ + M+ +G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGGSE---RDVFGYNALISGFVVNGSPLDAMETYREMRANG 156
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
PD ++F ++L A E +++H K G CY+ T
Sbjct: 157 ILPDKYTFPSLLKGSD--AMELSDVKKVHGLAFKLGFDS---------DCYVGSGLVTSY 205
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ + A+K+FDE P R+D +V WNA+
Sbjct: 206 SKFMSVEDAQKVFDELP----------------DRDD----------------SVLWNAL 233
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 314
++GY + +E+A F KM G+ + +T TS++SA +G + GR +H ++T
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 315 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 360
+ V+NALI Y K L +A +F+ M RDL +WN++L
Sbjct: 294 GSD----IVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL 335
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 156/366 (42%), Gaps = 55/366 (15%)
Query: 54 SNIPYAHHL-FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVK 112
S++ H L F + D + + L+++YS +V+ A+K+F+ P D++ +NA+V
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP-DRDDSVLWNALVN 235
Query: 113 AYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVM 172
YS A+ +F +M+ +G + ++VL A ++ + + + + +H VK G
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDID-NGRSIHGLAVKTGSG 294
Query: 173 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 232
V N L+ Y + W
Sbjct: 295 SDIVVSNALIDMY------------------------------GKSKW------------ 312
Query: 233 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
L A + + M WN+++ + G ++ F +M GI+ D T T+++
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPT 372
Query: 293 SFNTGLFNCGRQLHAYVLRTVV---QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
GR++H Y++ + + + S FI +N+L+ Y KCG L AR VFD M
Sbjct: 373 CGRLASLRQGREIHGYMIVSGLLNRKSSNEFI---HNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLK 405
V+D SWN +++GY E A +F R + + +T+ ++ + SGF E
Sbjct: 430 VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRN 489
Query: 406 LFNQMK 411
QM+
Sbjct: 490 FLAQME 495
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 155/401 (38%), Gaps = 97/401 (24%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
R+IH + TG ++ N LID+Y KS + A+ +F+ D+F+ ++L +
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY 340
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
G D + LF RM G PD + +
Sbjct: 341 CG---------------------------------DHDGTLALFERMLCSGIRPDIVTLT 367
Query: 144 TVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
TVL +A +++H G M V +LN
Sbjct: 368 TVLPTCGRLASLR-QGREIH------GYMIVSGLLN------------------------ 396
Query: 204 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 263
RK +E +++ YV+ DL AR + D M + +WN MI+GY
Sbjct: 397 RK--------SSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSC 448
Query: 264 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV--LRTVVQPSEHFI 321
E A D F M G++ DE T+ L+ A ++G N GR A + + ++ S+H+
Sbjct: 449 GELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYA 508
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILS----------GYINARRLE 370
+I + KL +A E+ P+ D V W +ILS + +RL
Sbjct: 509 -----CVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH 563
Query: 371 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
E + PE + + +M + E+G EE L + + M+
Sbjct: 564 ELE------PE-HCGGYVLMSNVYVEAGKYEEVLDVRDAMR 597
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 10/188 (5%)
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
D P T + L L+ G + +NA+ISG+V +G +A +T+R+M
Sbjct: 94 DSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMR 153
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+ GI D+YT+ SL+ S L + +++H + + V + L+T Y+K
Sbjct: 154 ANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCY----VGSGLVTSYSKF 208
Query: 336 GKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVM 390
+ A++VFD++P R D V WNA+++GY R E+A +F ++ E + T T +
Sbjct: 209 MSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSV 268
Query: 391 ISGLAESG 398
+S SG
Sbjct: 269 LSAFTVSG 276
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 168/380 (44%), Gaps = 40/380 (10%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL--RDTISYNAM 110
S + + + PD+ + T+++ G++ LA L D + YN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 111 VKA---YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDV 166
+ Y H D A+ LF M G PD F++S+++ L W +L D+
Sbjct: 265 IDGLCKYKHMDD---ALNLFTEMDNKGIRPDVFTYSSLISC--LCNYGRWSDASRLLSDM 319
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTM 223
++ + + L+ ++ LVE A KL+DE + + +P +++++
Sbjct: 320 IERKINPNVVTFSALIDAFV--KEGKLVE-------AEKLYDEM-IKRSIDPDIFTYSSL 369
Query: 224 IAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
I G+ +D L A+ + + M P V ++ +I G+ + EE + FR+M G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ TYT+LI F + + + ++ V P+ IL+ N L+ K GKL
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN---ILTYN-ILLDGLCKNGKLA 485
Query: 340 QAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMI 391
+A VF+ + D+ ++N ++ G A ++E+ +F + + N++ + MI
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 392 SGLAESGFGEESLKLFNQMK 411
SG G EE+ L +MK
Sbjct: 546 SGFCRKGSKEEADSLLKKMK 565
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 176/424 (41%), Gaps = 71/424 (16%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN----VKLAEKLFNA 96
++RNRL DI + + P P I LLSA + + L E++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM--Q 110
Query: 97 TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM---SLIA 153
T D +Y+ + + A+ + +M + G+ PD + S++L I+
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 154 EEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS 213
+ Q+ K ++++ L + LV+ V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC----------- 219
Query: 214 QKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 269
Q D ++ T++ G + D+ A +K+ G V +N +I G ++ ++A +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
F +M + GI+ D +TY+SLIS N G ++ +L + ++ + P+ + +ALI
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN----VVTFSALI 335
Query: 330 TFYTKCGKLVQAREVFDKMPVR-------------------------------------- 351
+ K GKLV+A +++D+M R
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 352 -DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKL 406
++V+++ ++ G+ A+R+EE +FRE+ +R N +T+T +I G ++ + + +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 407 FNQM 410
F QM
Sbjct: 456 FKQM 459
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/399 (21%), Positives = 168/399 (42%), Gaps = 85/399 (21%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNA 96
+I N +ID CK ++ A +LF + N PD+F+ ++L+S G A +L
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL-- 316
Query: 97 TPVTLR----DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL- 151
+ + R + ++++A++ A+ A KL+ M + PD F++S+++ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 152 -IAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMASARKLFD 208
+E H +L C P+V+ +TL+ + C + + E +LF
Sbjct: 377 DRLDEAKHMFELM-----ISKDCFPNVVTYSTLIKGF--CKAKRVEE-------GMELFR 422
Query: 209 EAPLSQK----DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVR 260
E +SQ+ + ++TT+I G+ + D +A+ + M HP + +N ++ G +
Sbjct: 423 E--MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
+G +A F + ++ D YTY
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTY---------------------------------- 506
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIF 376
N +I K GK+ E+F + ++ +++++N ++SG+ EEA +
Sbjct: 507 -----NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 377 REVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
+++ E L T+ +I G E S +L +M+
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH---GLY--EEAFDTFRKMH 275
TT++ Y +N DL ARK+ D M +V WNAMI GY H G + +A FR+
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 276 --SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
G++ + T ++SA TGL G +H Y+ + P + AL+ Y+
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF--IGTALVDMYS 268
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIFREVP---ERNLLTWTV 389
KCG L A VF+ M V+++ +W ++ +G +N R E + R + N +T+T
Sbjct: 269 KCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 390 MISGLAESGFGEESLKLFNQMK 411
++S G EE ++LF MK
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMK 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 57/286 (19%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAY-SHNLDG-HAAVKLFVRMKR 132
TTLL Y+ G+++ A K+F+ P R ++++NAM+ Y SH G H A K V +R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPE--RTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRR 208
Query: 133 -----DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
G P + VL A+S E + +L+ YI
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLE---------------------IGSLVHGYI- 246
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
L +P + D T ++ Y + L +A + + M
Sbjct: 247 ---EKLGFTP----------------EVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN 287
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-H 306
W +M +G +G E + +M GI+ +E T+TSL+SA + GL G +L
Sbjct: 288 VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFK 347
Query: 307 AYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ R V P EH+ ++ K G++ +A + MP++
Sbjct: 348 SMKTRFGVTPVIEHY-----GCIVDLLGKAGRIQEAYQFILAMPIK 388
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 144/344 (41%), Gaps = 51/344 (14%)
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
D P P F L++ YS + + A + TP R+ +S+ +++ + N
Sbjct: 36 LDSPPPP--FLANYLINMYSKLDHPESARLVLRLTPA--RNVVSWTSLISGLAQNGHFST 91
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A+ F M+R+G P+ F+F A++ + +Q+H VK G +L
Sbjct: 92 ALVEFFEMRREGVVPNDFTFPCAFKAVASL-RLPVTGKQIHALAVKCG---------RIL 141
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
++ C++ + L ARKLFDE P RN +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIP----------------ERNLE---------- 175
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
WNA IS V G EA + F + + + T+ + ++A + N G
Sbjct: 176 -------TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 362
QLH VLR+ +SV N LI FY KC ++ + +F +M ++ VSW ++++
Sbjct: 229 MQLHGLVLRSGFDTD----VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 363 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 406
Y+ E+A ++ + + T MIS + + G L+L
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 152/352 (43%), Gaps = 63/352 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F + Y A KLF+ P R+ ++NA + + A++ F+
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPE--RNLETWNAFISNSVTDGRPREAIEAFIE 199
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQ---QLHCDVVKWGVMCVPSVLNTLLSCY 185
+R P+ +F L A S +W H QLH V++ G SV N L+ Y
Sbjct: 200 FRRIDGHPNSITFCAFLNACS-----DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C + S+ +F E M
Sbjct: 255 GKCKQ---------IRSSEIIFTE---------------------------------MGT 272
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
AV+W ++++ YV++ E+A + + ++ ++ +S++SA GR +
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI 332
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 365
HA+ ++ V+ + + V +AL+ Y KCG + + + FD+MP ++LV+ N+++ GY +
Sbjct: 333 HAHAVKACVERT----IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 366 ARRLEEAKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+++ A +F E+ P N +T+ ++S + +G E +K+F+ M+
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+I Y + D SAR +L V+W ++ISG ++G + A F +M G+ +
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
++T+ A + L G+Q+HA + KCG+++
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAV-----------------------KCGRIL--- 141
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 402
+VF D+ Y R ++A+ +F E+PERNL TW IS G E
Sbjct: 142 DVFVGCSAFDM---------YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 403 SLKLFNQMK 411
+++ F + +
Sbjct: 193 AIEAFIEFR 201
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 54/332 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ T+L+S YS G +++AE+LF + RD +S++AM+ +Y A+ LF
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRD 391
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M R P+ + ++VL + +A + +HC +K + ++S Y C
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLG-KSIHCYAIKADIESELETATAVISMYAKCG 450
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
SP L K F+ P+ KD AV
Sbjct: 451 RF----SPAL-----KAFERLPI--KD-------------------------------AV 468
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
A+NA+ GY + G +AFD ++ M G+ D T ++ + G ++ +
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAILSGYINARR 368
++ H V +ALI +TKC L A +FDK + VSWN +++GY+ +
Sbjct: 529 IKHGFDSECH----VAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 369 LEEAKFIFREVP----ERNLLTWTVMISGLAE 396
EEA FR++ + N +T+ ++ AE
Sbjct: 585 AEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 146/341 (42%), Gaps = 54/341 (15%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T ++S Y+ G A K F P+ +D +++NA+ + Y+ D + A ++ MK G
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPI--KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 135 FAPDPFSFSTVLGAMSLIAE-EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
PD + +L + ++ C ++ ++K G V + L++ + C +
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSC--VYGQIIKHGFDSECHVAHALINMFTKCDA--- 552
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+A+A LFD+ + V+WN
Sbjct: 553 ------LAAAIVLFDKCGFEKS--------------------------------TVSWNI 574
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
M++GY+ HG EEA TFR+M Q + T+ +++ A+ G +H+ ++
Sbjct: 575 MMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS----SL 630
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+Q V N+L+ Y KCG + + + F ++ + +VSWN +LS Y A
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 374 FIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+F + E L +++ ++S +G EE ++F +M
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 55/330 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ T L+ Y A ++ A ++F+ V +D +++N MV + N AA+ LF
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHV--KDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ D S ++ A+S + + + C+ LH V+K G + S + L+ Y CA
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDV-CRCLHGLVIKKGFIFAFS--SGLIDMYCNCA 248
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+ +A +F+E + +KDE SW TM+A Y N
Sbjct: 249 D---------LYAAESVFEE--VWRKDESSWGTMMAAYAHN------------------- 278
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
G +EE + F M + ++M++ S + A+ G G +H Y
Sbjct: 279 ------------GFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY- 325
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
VQ +SV +L++ Y+KCG+L A ++F + RD+VSW+A+++ Y A +
Sbjct: 326 ---AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 370 EEAKFIFREV----PERNLLTWTVMISGLA 395
+EA +FR++ + N +T T ++ G A
Sbjct: 383 DEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASF 294
+R + D + P V WN+MI GY R GL+ EA F M GI D+Y++T + A
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 354
+ F G ++H + ++ + + AL+ Y K LV AR+VFDKM V+D+V
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVY----IGTALVEMYCKARDLVSARQVFDKMHVKDVV 167
Query: 355 SWNAILSG 362
+WN ++SG
Sbjct: 168 TWNTMVSG 175
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 137/363 (37%), Gaps = 85/363 (23%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
DSRTM + Q + ++ I+ GF + + LI+++ K + A
Sbjct: 501 DSRTMVGML--QTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
LFDK F ++T +S+N M+ Y +
Sbjct: 559 LFDKCG----FEKST----------------------------VSWNIMMNGYLLHGQAE 586
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
AV F +MK + F P+ +F ++ A + ++ ++ G+ SV ++L
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELS------------ALRVGM----SVHSSL 630
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ C C P +++ Y + + S+ K
Sbjct: 631 IQCGFC---------------------------SQTPVGNSLVDMYAKCGMIESSEKCFI 663
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+++ V+WN M+S Y HGL A F M ++ D ++ S++SA + GL
Sbjct: 664 EISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEE 723
Query: 302 GRQLHAYV--LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNA 358
G+++ + + EH+ ++ K G +A E+ +M V+ V W A
Sbjct: 724 GKRIFEEMGERHKIEAEVEHYA-----CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGA 778
Query: 359 ILS 361
+L+
Sbjct: 779 LLN 781
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 159/405 (39%), Gaps = 84/405 (20%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTG-FRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN 68
LA ++ +AR HA +L + + L+ L+D+Y K + A H+FD+
Sbjct: 154 LLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ--- 210
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
+ +++ +S+ AM+ N + V LF
Sbjct: 211 ------------------------------MEVKNEVSWTAMISGCVANQNYEMGVDLFR 240
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M+R+ P+ + +VL A C + +G V +
Sbjct: 241 AMQRENLRPNRVTLLSVLPA---------------CVELNYGSSLVKEIHG--------- 276
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
F DE + Y R +++ +R L +
Sbjct: 277 ------------------FSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V W++MISGY G E + +M GI+ + T +++SA N+ L + +H+
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI---- 364
+L+ H +L NALI Y KCG L AREVF ++ +DLVSW+++++ Y
Sbjct: 379 ILKCGFMS--HILL--GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 409
+ LE K + + E + + + ++S +G EE+ +F Q
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 45/313 (14%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLG----------AMSLI 152
DT+ N+++ Y+ +A K+F M D S+ +++ AM LI
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEM----LHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 153 AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPL 212
E + +G + ++ +LL+ SS+ V M A L DE
Sbjct: 137 KEMYF-----------YGFIPKSELVASLLALCTRMGSSSKVAR---MFHALVLVDERM- 181
Query: 213 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 272
Q+ T ++ Y++ DD A+A + D M V+W AMISG V + YE D FR
Sbjct: 182 -QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFR 240
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCG----RQLHAYVLRTVVQPSEHFILSVNNAL 328
M ++ + T S++ A N G +++H + R E + A
Sbjct: 241 AMQRENLRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHADER----LTAAF 293
Query: 329 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNL 384
+T Y +CG + +R +F+ VRD+V W++++SGY E + +E E N
Sbjct: 294 MTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANS 353
Query: 385 LTWTVMISGLAES 397
+T ++S S
Sbjct: 354 VTLLAIVSACTNS 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 59/309 (19%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
++ Y GNV L+ LF + V RD + +++M+ Y+ D + L +M+++G
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKV--RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIE 350
Query: 137 PDPFSFSTVLGAMS---LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
+ + ++ A + L++ +H ++K G M + N L+ Y C S
Sbjct: 351 ANSVTLLAIVSACTNSTLLS----FASTVHSQILKCGFMSHILLGNALIDMYAKCGS--- 403
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+++AR++F E L++KD SW++MI Y G+
Sbjct: 404 ------LSAAREVFYE--LTEKDLVSWSSMINAY--------------GL---------- 431
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
HG EA + F+ M G ++D+ + +++SA + GL + + +
Sbjct: 432 -------HGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH 484
Query: 314 VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYINARRLEE 371
+ + EH+ +N + GK+ A EV MP++ W+++LS RL+
Sbjct: 485 MPVTLEHYACYIN-----LLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 372 A-KFIFREV 379
A K I E+
Sbjct: 540 AGKIIANEL 548
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 151/369 (40%), Gaps = 82/369 (22%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
+H ++ TGF ++ + L D+Y K A LF N D
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD---------------- 189
Query: 87 VKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
TIS+ M+ + A++ + M + G P+ F+F +L
Sbjct: 190 -----------------TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
GA S + E + +H +++ G+ P LN +L
Sbjct: 233 GASSFLGLE--FGKTIHSNIIVRGI---P--LNVVLK----------------------- 262
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
T+++ Y + + A ++L+ W +++SG+VR+ +E
Sbjct: 263 --------------TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKE 308
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A TF +M S+G+Q + +TY++++S + G+Q+H+ ++ + S V N
Sbjct: 309 AVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDST----DVGN 364
Query: 327 ALITFYTKC-GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
AL+ Y KC V+A VF M ++VSW ++ G ++ +++ + E+ +R +
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 386 TWTVMISGL 394
V +SG+
Sbjct: 425 PNVVTLSGV 433
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 223 MIAGYVRNDDLASARKL------LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
M+ G D AS+RK+ + M + + ++++ + G +E A M+
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
GI+MD+ + ISAS N G G+ LH Y +++ + SV N+L+ Y+KCG
Sbjct: 522 DGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA----SVLNSLVDMYSKCG 577
Query: 337 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMIS 392
L A++VF+++ D+VSWN ++SG + + A F E+ E + +T+ +++S
Sbjct: 578 SLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Query: 393 GLAESGFGEESLKLFNQMK 411
+ + L+ F MK
Sbjct: 638 ACSNGRLTDLGLEYFQVMK 656
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+++ Y++ D + +ARKL D M+H AW MIS + + + A F +M + G +
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E+T++S++ + + G ++H V++T + + V ++L Y+KCG+ +A
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS----VVGSSLSDLYSKCGQFKEAC 179
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
E+F + D +SW ++S + AR+ EA + E+
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEM 216
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 129/341 (37%), Gaps = 79/341 (23%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ IH++I+ G L +++ L+D Y + S + A + + + D+F T+++S +
Sbjct: 242 FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
NL AV F+ M+ G P+ F++
Sbjct: 302 ---------------------------------RNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S +L S + ++ +Q+H +K G V N L+ Y+ C++S +
Sbjct: 329 SAILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV--------- 378
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
A ++ M P V+W +I G V HG
Sbjct: 379 --------------------------------EASRVFGAMVSPNVVSWTTLILGLVDHG 406
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
++ F +M ++ + T + ++ A ++HAY+LR V +
Sbjct: 407 FVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGE----M 462
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
V N+L+ Y K+ A V M RD +++ ++++ +
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 121/294 (41%), Gaps = 54/294 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
+L + + ++ +L+ AY+++ V A + + + RD I+Y ++V ++
Sbjct: 452 YLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRS--MKRRDNITYTSLVTRFNELGKH 509
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNT 180
A+ + M DG D S + A + + E + LHC VK G SVLN+
Sbjct: 510 EMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSGAASVLNS 568
Query: 181 LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
L+ Y C S + A+K+F+E
Sbjct: 569 LVDMYSKCGS---------LEDAKKVFEE------------------------------- 588
Query: 241 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
+ P V+WN ++SG +G A F +M + D T+ L+SA N L +
Sbjct: 589 --IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTD 646
Query: 301 CGRQLHAYVLRTV--VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
G + + V++ + ++P EH++ L+ + G+L +A V + M ++
Sbjct: 647 LGLE-YFQVMKKIYNIEPQVEHYV-----HLVGILGRAGRLEEATGVVETMHLK 694
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 181/400 (45%), Gaps = 37/400 (9%)
Query: 30 HILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKL 89
+L GF + L++ CK + A LF + P P+I TL+ + G +
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 90 AEKLFNATPVT---LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
A+ + + + + D +YN+++ Y A+++ M+ G P+ +S++ ++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 147 GAMSLIA--EEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASA 203
+ +E ++ ++ D +K + N L+S + C + E A
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVG----FNCLISAF--CKEHRIPE-------A 478
Query: 204 RKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA----WNAMISG 257
++F E P + D ++ ++I+G D++ A LL M VA +N +I+
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
++R G +EA +M G +DE TY SLI G + R L +LR PS
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAK 373
+S N LI + G + +A E +M +R D+V++N++++G A R+E+
Sbjct: 599 N---ISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 374 FIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQ 409
+FR++ + +T+ ++S L + GF ++ L ++
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 68/395 (17%)
Query: 66 TPNPDIFSRTTLLSAYSAAGNV----KLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGH 121
PN I+ TL+ + S V +L E++F V D ++N ++ +
Sbjct: 249 VPNSVIYQ--TLIHSLSKCNRVNEALQLLEEMFLMGCVP--DAETFNDVILGLCKFDRIN 304
Query: 122 AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS----V 177
A K+ RM GFAPD ++ ++ + C+ D K +P +
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGL---------CKIGRVDAAKDLFYRIPKPEIVI 355
Query: 178 LNTLLSCYI------------------------CCASSTLV----ESPVLMASARKLFDE 209
NTL+ ++ C ++L+ + ++ + L D
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 210 APLSQKDEP-SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLY 264
K S+T ++ G+ + + A +L+ M+ P V +N +IS + +
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA-YVLRTVVQPSEHFILS 323
EA + FR+M G + D YT+ SLIS GL HA ++LR ++
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLIS-----GLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 324 VNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIF--- 376
N LI + + G++ +AR++ ++M + D +++N+++ G A +++A+ +F
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 377 -REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
R+ + ++ ++I+GL SG EE+++ +M
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 167/393 (42%), Gaps = 80/393 (20%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ IHA I+T G ++L+ + + + YA + + PNP +F TL+S+ +
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHL-SSTVCLSYALSILRQIPNPSVFLYNTLISSIVSN 84
Query: 85 GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
N F+ Y+ ++ + S+ FVR P+ F++ +
Sbjct: 85 HNSTQTHLAFSL----------YDQILSSRSN----------FVR-------PNEFTYPS 117
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKW--GVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ A A+ H + LH V+K+ V V L+ Y C +
Sbjct: 118 LFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK---------LRE 168
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
AR LF+ + + D +W T++A Y ++++ S
Sbjct: 169 ARSLFER--IREPDLATWNTLLAAYANSEEIDSD-------------------------- 200
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
EE F +M ++ +E + +LI + N G F G H YVL+ + ++
Sbjct: 201 --EEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF--- 252
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 382
V +LI Y+KCG L AR+VFD+M RD+ +NA++ G +E +++ + +
Sbjct: 253 -VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ 311
Query: 383 NLL----TWTVMISGLAESGFGEESLKLFNQMK 411
L+ T+ V IS + SG +E L++FN MK
Sbjct: 312 GLVPDSATFVVTISACSHSGLVDEGLQIFNSMK 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T++I Y + L+ ARK+ D M+ +NAMI G HG +E + ++ + S G+
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV--VQPS-EHFILSVNNALITFYTKCGK 337
D T+ ISA ++GL + G Q+ ++ V ++P EH+ L+ + G+
Sbjct: 315 PDSATFVVTISACSHSGLVDEGLQIFN-SMKAVYGIEPKVEHY-----GCLVDLLGRSGR 368
Query: 338 LVQAREVFDKMPVR-DLVSWNAIL 360
L +A E KMPV+ + W + L
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFL 392
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 174/422 (41%), Gaps = 49/422 (11%)
Query: 27 IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN 86
IH +++ TG ++L+ + +I YA +F+ N ++F T++ YS +
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 87 VKLAEKLFN---ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA------P 137
+ A +FN A +TL D S+ +K+ S L L R GF
Sbjct: 106 PERAFSVFNQLRAKGLTL-DRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW-----GVMCVPSVLNTLLSCYICCASST 192
F V G +S A + + D V + G + V L I S
Sbjct: 165 ALIHFYCVCGKIS-DARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPS--------------WTTMIAGYVRNDDLASARK 238
+V L++ + D LS + T +I Y + ++SAR+
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+ D V WN MI Y + GL EE R+M ++ + T+ L+S+
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS------ 337
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVN----NALITFYTKCGKLVQAREVFDKMPVRDLV 354
C A+V RTV E ++++ AL+ Y K G L +A E+F++M +D+
Sbjct: 338 --CAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
Query: 355 SWNAILSGYINARRLEEAKFIFREVPERNL------LTWTVMISGLAESGFGEESLKLFN 408
SW A++SGY EA +F ++ E N +T+ V+++ + G E ++ F
Sbjct: 396 SWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFK 455
Query: 409 QM 410
+M
Sbjct: 456 RM 457
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 60/350 (17%)
Query: 38 LTPLIRNRLIDIY-CKSS-NIPYAHHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLF 94
L+P + + D+ C+ + + H KT + D F+ + LL A+S+ +++ A +F
Sbjct: 24 LSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIF 82
Query: 95 NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAE 154
T + +N M++ YS + + A +F +++ G D FSF T L + S
Sbjct: 83 EHVSNT--NLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCS---- 136
Query: 155 EEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA 210
C + LH ++ G M + N L+ Y C ++ ARK+FDE
Sbjct: 137 -RELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK---------ISDARKVFDEM 186
Query: 211 PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
P S D +++T++ GY L ++K L A D
Sbjct: 187 PQSV-DAVTFSTLMNGY-----LQVSKKAL--------------------------ALDL 214
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
FR M + ++ T S +SA + G + H ++ + H I ALI
Sbjct: 215 FRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLI----TALIG 270
Query: 331 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
Y K G + AR +FD +D+V+WN ++ Y LEE ++ R++
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 145/368 (39%), Gaps = 74/368 (20%)
Query: 54 SNIPYAHHLFDKTP-NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVK 112
S AH L K + D+ T L+ Y G + A ++F+ +D +++N M+
Sbjct: 244 SGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA--IRKDVVTWNCMID 301
Query: 113 AYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIA-EEEWHCQQLHCDVVKWGV 171
Y+ V L +MK + P+ ST +G +S A E + D+++
Sbjct: 302 QYAKTGLLEECVWLLRQMKYEKMKPNS---STFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 172 MCVPSVLNT-LLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRN 230
+ + ++L T L+ Y A L+E V ++F+ + KD SWT M
Sbjct: 359 IALDAILGTALVDMY---AKVGLLEKAV------EIFNR--MKDKDVKSWTAM------- 400
Query: 231 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM--DEYTYTS 288
ISGY HGL EA F KM ++ +E T+
Sbjct: 401 ------------------------ISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLV 436
Query: 289 LISASFNTGLFNCG-----RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 343
+++A + GL G R + AY V EH+ ++ + G+L +A E
Sbjct: 437 VLNACSHGGLVMEGIRCFKRMVEAYSFTPKV---EHY-----GCVVDLLGRAGQLEEAYE 488
Query: 344 VFDKMPV-RDLVSWNAILSG---YINARRLEEAKFIFREVPERN-----LLTWTVMISGL 394
+ +P+ D +W A+L+ Y NA E E+ E + LL T ++G
Sbjct: 489 LIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Query: 395 AESGFGEE 402
E E
Sbjct: 549 PEKSLDNE 556
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 180/413 (43%), Gaps = 44/413 (10%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
A A+ + TG++ + N LI + A L D K PD+ + +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 80 AYSAAGNVKLAEKLFNATPVTLRD--TISYNAMVKA---YSHNLDGHAAVKLFVRMKRDG 134
G+ LA L N + + YN ++ Y H D A+ LF M+ G
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD---ALNLFKEMETKG 286
Query: 135 FAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
P+ ++S+++ L W +L D+++ + + L+ ++ L
Sbjct: 287 IRPNVVTYSSLISC--LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV--KEGKL 342
Query: 194 VESPVLMASARKLFDEAPLSQKDEPS---WTTMIAGYVRNDDLASARKLLDGMTH----P 246
VE A KL+DE + + +PS ++++I G+ +D L A+++ + M P
Sbjct: 343 VE-------AEKLYDEM-VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V +N +I G+ ++ EE + FR+M G+ + TY LI F G + +++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL----VSWNAILSG 362
++ V P+ + N L+ K GKL +A VF+ + + ++N ++ G
Sbjct: 455 KEMVSDGVPPN----IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 363 YINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
A ++E+ +F + + +++ + MISG G EE+ LF +MK
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
Query: 46 LIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--ATPV 99
LID + K + A L+D ++ +P I + ++L++ + + A+++F +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
D ++YN ++K + +++F M + G + +++ ++ + + +
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM-A 450
Query: 160 QQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
Q++ ++V GV P+++ NTLL C + L ++ V+ ++ K E
Sbjct: 451 QEIFKEMVSDGV--PPNIMTYNTLLDGL--CKNGKLEKAMVVFEYLQR--------SKME 498
Query: 218 PS---WTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDT 270
P+ + MI G + + L ++ P VA+N MISG+ R G EEA
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTG 297
F++M G + Y +LI A G
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDG 585
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 178/418 (42%), Gaps = 59/418 (14%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
AR H + +GF +TP N LI+ YCK A + D+ N I+ T+ + Y
Sbjct: 292 ARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 84 A----GNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
A G + A +L ++ D +SYN ++ Y A LF ++ P
Sbjct: 352 ALCDFGRIDDARELLSSMAAP--DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI 409
Query: 140 FSFSTVL----------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+++T++ GA L +EE Q + DV+ + + V N LS
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRL--KEEMTTQLIFPDVITYTTLVKGFVKNGNLSM----- 462
Query: 190 SSTLVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH-- 245
A +++DE + D ++TT G +R D A +L + M
Sbjct: 463 -------------ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 246 ---PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
P +N I G + G +A + RK+ +G+ D TYT++I G F
Sbjct: 510 HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 303 RQLHAYVLRTVVQPS--EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSW 356
R L+ +LR + PS +F+L +A K G+L QA + +M R ++++
Sbjct: 570 RNLYDEMLRKRLYPSVITYFVLIYGHA------KAGRLEQAFQYSTEMKKRGVRPNVMTH 623
Query: 357 NAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
NA+L G A ++EA ++ E N ++T++IS + EE +KL+ +M
Sbjct: 624 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEM 681
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 176/394 (44%), Gaps = 68/394 (17%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD----TISYNAMVKAYSHNLDGHAAV 124
P + + T+L + AG+++ +K++ + R+ ++YN ++ +S N A
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIW--LEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 125 KLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN----- 179
+ M+R GFA P+SF+ ++ E +C+Q D WGV +LN
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLI---------EGYCKQGLFDDA-WGV--TDEMLNAGIYP 341
Query: 180 --TLLSCYICC-----------------ASSTLVESPVLMASARKL--FDEAPLSQKD-- 216
+ + YIC A+ +V LM K+ F EA L D
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 217 ----EPS---WTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYE 265
PS + T+I G + +L A++L + MT P + + ++ G+V++G
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
A + + +M GI+ D Y YT+ G + +LH ++ T + L++
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD---LTIY 518
Query: 326 NALITFYTKCGKLVQA----REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
N I K G LV+A R++F V D V++ ++ GY+ + + A+ ++ E+
Sbjct: 519 NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 382 RNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ L +T+ V+I G A++G E++ + +MK
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 48/363 (13%)
Query: 26 AIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAY 81
+ IL GF L + N L++ +CK NI A +FD ++ P + S TL++ Y
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 82 SAAGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDP 139
GN+ +L + T D +Y+A++ A A LF M + G P+
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 140 FSFSTVL------GAMSLIAE--EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
F+T++ G + L+ E ++ + L D+V + NTL++ + C +
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY---------NTLVNGF--CKNG 394
Query: 192 TLVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASA---RKLLDGMTHP 246
LV +AR + D + D+ ++TT+I G+ R D+ +A RK +D
Sbjct: 395 DLV-------AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 247 I-AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
+ V ++A++ G + G +A R+M GI+ D+ TYT ++ A G G
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG--- 504
Query: 306 HAYVLRTVVQPSEHFILSVN-NALITFYTKCGKLVQAREVFDKM----PVRDLVSWNAIL 360
+ L +Q H V N L+ K G++ A + D M V D +++N +L
Sbjct: 505 --FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Query: 361 SGY 363
G+
Sbjct: 563 EGH 565
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 220 WTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ ++ + + +++ A+K+ D +T P V++N +I+GY + G +E F +M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
+ D +TY++LI+A + L + + + P++ + LI +++
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND----VIFTTLIHGHSRN 358
Query: 336 GKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTW 387
G++ +E + KM + D+V +N +++G+ L A+ I + R L +T+
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 388 TVMISGLAESGFGEESLKLFNQM 410
T +I G G E +L++ +M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEM 441
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 106/195 (54%), Gaps = 8/195 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
++++ Y + ++ ARK+ D M V W+ M+ GY + G EEA F++ +
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+++Y+++S+IS N+ L GRQ+H +++ S V ++L++ Y+KCG
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSS----SFVGSSLVSLYSKCGVPEG 270
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAE 396
A +VF+++PV++L WNA+L Y ++ +F+ + + N +T+ +++ +
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 397 SGFGEESLKLFNQMK 411
+G +E F+QMK
Sbjct: 331 AGLVDEGRYYFDQMK 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 54/328 (16%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ D+F ++L+ Y+ G + A K+F+ P R+ ++++ M+ Y+ + A+ LF
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMP--QRNVVTWSGMMYGYAQMGENEEALWLF 205
Query: 128 VRMKRDGFAPDPFSFSTVLG--AMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
+ A + +SFS+V+ A S + E +Q+H +K V ++L+S Y
Sbjct: 206 KEALFENLAVNDYSFSSVISVCANSTLLELG---RQIHGLSIKSSFDSSSFVGSSLVSLY 262
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C + A ++F+E P V+N +
Sbjct: 263 SKCG---------VPEGAYQVFNEVP----------------VKNLGI------------ 285
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
WNAM+ Y +H ++ + F++M G++ + T+ ++++A + GL + GR
Sbjct: 286 -----WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYY 340
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSGYI 364
+ + ++P++ S L+ + G+L +A EV MP+ S W A+L+
Sbjct: 341 FDQMKESRIEPTDKHYAS----LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCT 396
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMIS 392
+ E A F +V E ++ + IS
Sbjct: 397 VHKNTELAAFAADKVFELGPVSSGMHIS 424
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 46/224 (20%)
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
QLH VVK G+ +P V N L++ Y L +R+ F+++P QK +W
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFY---------SKSQLPFDSRRAFEDSP--QKSSTTW 84
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+++I+ + +N+ + W ++ + +KM + ++
Sbjct: 85 SSIISCFAQNE-----------------LPWMSL--------------EFLKKMMAGNLR 113
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
D++ S + + GR +H ++T + V ++L+ Y KCG++V
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD----VFVGSSLVDMYAKCGEIVY 169
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
AR++FD+MP R++V+W+ ++ GY EEA ++F+E NL
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 162/395 (41%), Gaps = 52/395 (13%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
R +H I + ++ + + N LI +Y + N+ A LFD+ D S +++ Y+
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 83 AAGNVKLAEKLFNATPVTLRD--TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
+ G A +LF+ + + I++N + + A+ L RM+ + DP
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
+ L A SLI +++H + + +V NTL++ Y C +
Sbjct: 282 AMIIGLKACSLIGAIRLG-KEIHGLAIHSSYDGIDNVRNTLITMYSKCKD---------L 331
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
A +F Q +E S T WN++ISGY +
Sbjct: 332 RHALIVF-----RQTEENSLCT----------------------------WNSIISGYAQ 358
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
EEA R+M G Q + T S++ G++ H Y+LR
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 380
+ N+L+ Y K GK+V A++V D M RD V++ +++ GY N A +F+E+
Sbjct: 419 LW---NSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMT 475
Query: 381 ERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+ +T ++S + S E +LF +M+
Sbjct: 476 RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQ 510
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 10/171 (5%)
Query: 245 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
HP+ WN +I+ Y ++ L+EE +++M S GI+ D +TY S++ A T GR
Sbjct: 108 HPLP--WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+H + + + S L V NALI+ Y + + AR +FD+M RD VSWNA+++ Y
Sbjct: 166 VHGSIEVSSYKSS----LYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 365 NARRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ EA +F ++ E +++TW ++ G ++G +L L ++M+
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 123/297 (41%), Gaps = 61/297 (20%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLD 119
H +D N R TL++ YS +++ A +F T ++N+++ Y+
Sbjct: 308 HSSYDGIDNV----RNTLITMYSKCKDLRHALIVFRQTEEN--SLCTWNSIISGYAQLNK 361
Query: 120 GHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLN 179
A L M GF P+ + +++L + IA + H ++ HC +++
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ-HGKEFHCYILR----------- 409
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
RK F + + W +++ Y ++ + +A+++
Sbjct: 410 ------------------------RKCFKDYTML------WNSLVDVYAKSGKIVAAKQV 439
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
D M+ V + ++I GY G A F++M GI+ D T +++SA ++ L
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 300 NCGRQLH-----AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
+ G +L Y +R +Q HF + ++ Y + G L +A+++ MP +
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQ---HF-----SCMVDLYGRAGFLAKAKDIIHNMPYK 548
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 185/440 (42%), Gaps = 33/440 (7%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAH 60
M S+T L + + T+ + +H+ + + P +L Y + ++ A
Sbjct: 1 MASQTQLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISAR 60
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNAT--PVTLRDTISYNAMVKAYSHNL 118
LFD P +F +++ AY+ A LF+ T D +Y + + +S +
Sbjct: 61 KLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESF 120
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS---LIAE-EEWHCQQLHCDVVKWGVMCV 174
D + G D S ++ A S LI E + C D+ W VM +
Sbjct: 121 DTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMIL 180
Query: 175 P-----------SVLNTLL------SCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 217
++ N + +CY A ++ + P L+ A + D
Sbjct: 181 GYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDS 240
Query: 218 PSWT--TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
S+ ++ Y R +ASA + + ++ P VA +++I+GY R G ++EA F ++
Sbjct: 241 HSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G + D ++ + G+++H+YV+R ++ + V +ALI Y+KC
Sbjct: 301 MSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELD----IKVCSALIDMYSKC 356
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMI 391
G L A +F +P +++VS+N+++ G A F E+ E L +T++ ++
Sbjct: 357 GLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
Query: 392 SGLAESGFGEESLKLFNQMK 411
SG + ++F +MK
Sbjct: 417 CTCCHSGLLNKGQEIFERMK 436
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
++++ Y + ++ +A K+ + M V+W AMISG+ + + + KM
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
++YT+T+L+SA +G GR +H L ++ H ++N+LI+ Y KCG L
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH----ISNSLISMYCKCGDLKD 274
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF-----REVPERNLLTWTVMISGLA 395
A +FD+ +D+VSWN++++GY +A +F + + + +T+ ++S
Sbjct: 275 AFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
Query: 396 ESGFGEESLKLFNQM 410
+G +E K FN M
Sbjct: 335 HAGLVKEGRKFFNLM 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 59/297 (19%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D++ ++L+ Y +G V+ A K+F P R+ +S+ AM+ ++ +KL+ +
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPE--RNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 130 MKRDGFAPDPFSFSTVL----GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 185
M++ P+ ++F+ +L G+ +L HCQ LH G+ + N+L+S Y
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLH-----MGLKSYLHISNSLISMY 266
Query: 186 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 245
C + A ++FD+ S KD SW +MIA
Sbjct: 267 CKCGD---------LKDAFRIFDQ--FSNKDVVSWNSMIA-------------------- 295
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFR-KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
GY +HGL +A + F M G + D TY ++S+ + GL GR+
Sbjct: 296 -----------GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAIL 360
+ ++P L+ + L+ + G L +A E+ + MP++ + V W ++L
Sbjct: 345 FFNLMAEHGLKPE----LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
Query: 10 FLAQLNHPSATQTLA--RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP 67
F A L+ + + L R++H L G + I N LI +YCK ++ A +FD+
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFN---ATPVTLRDTISYNAMVKAYSHNLDGHAAV 124
N D+ S ++++ Y+ G A +LF T D I+Y ++ + H
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 125 KLFVRMKRDGFAPDPFSFST---VLGAMSLIAE 154
K F M G P+ +S +LG L+ E
Sbjct: 344 KFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQE 376
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 139/346 (40%), Gaps = 51/346 (14%)
Query: 18 SATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTL 77
S + TLA+ +HA +L GF T NR + +Y KS ++ A LFD P+ + +
Sbjct: 17 SKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVC 76
Query: 78 LSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
L G + A LF+ P RD +S+N M+ +++F M+R P
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPE--RDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRP 134
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
F+FS + ++ + H +Q+H + + GV
Sbjct: 135 TEFTFSILASLVTCVR----HGEQIHGNAICSGV-------------------------- 164
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 257
S+ + W +++ Y R A + M V+WN +I
Sbjct: 165 ---------------SRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILS 209
Query: 258 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 317
G E A D F M M IQ DEYT + ++S + + G+Q A ++ S
Sbjct: 210 CSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFL-S 268
Query: 318 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+L A I ++KC +L + ++F ++ D V N+++ Y
Sbjct: 269 NSIVL---GAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 202 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 261
+A +LFD+ P K+ +W + G +N L +A L D M V+WN MISG V
Sbjct: 57 NALQLFDDIP--DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSC 114
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC---GRQLHAYVLRTVVQPSE 318
G +E F M I+ E+T++ L S L C G Q+H +
Sbjct: 115 GFHEYGIRVFFDMQRWEIRPTEFTFSILAS------LVTCVRHGEQIHG---NAICSGVS 165
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK---FI 375
+ L V N+++ Y + G A VF M RD+VSWN ++ ++ E A ++
Sbjct: 166 RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWL 225
Query: 376 FREV---PERNLLTWTVMI-SGLAESGFGEESLKLFNQM 410
RE+ P+ ++ V I S L E G+++L L +M
Sbjct: 226 MREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKM 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%)
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 384
N + Y K G ++ A ++FD +P ++ ++WN L G L A +F E+PER++
Sbjct: 42 GNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDV 101
Query: 385 LTWTVMISGLAESGFGEESLKLFNQMK 411
++W MISGL GF E +++F M+
Sbjct: 102 VSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 128/317 (40%), Gaps = 57/317 (17%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
RD +S+N ++ + S + + A+ F M+ PD ++ S V+ S + E Q
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
L +C L S VL A
Sbjct: 258 LA----------------------LCIKMGFLSNSIVLGAG------------------- 276
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
I + + + L + KL + +V N+MI Y H E+A F + ++
Sbjct: 277 --IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRP 334
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
D++T++S++S S N + + G +H+ V++ +V +L+ Y K G + A
Sbjct: 335 DKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDT----AVATSLMEMYFKTGSVDLA 389
Query: 342 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV-------PERNLLTWTVMISGL 394
VF K +DL+ WN ++ G R E+ IF ++ P+R +T ++
Sbjct: 390 MGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDR--VTLMGILVAC 447
Query: 395 AESGFGEESLKLFNQMK 411
+GF E +++F+ M+
Sbjct: 448 CYAGFVNEGIQIFSSME 464
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D++ N+M+ +YS + G A++LF+ PD F+FS+VL +M+ + + H +
Sbjct: 300 DSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLD--HGADV 357
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H V+K G +V +L+ Y S L A +F A KD W T
Sbjct: 358 HSLVIKLGFDLDTAVATSLMEMYFKTGSVDL---------AMGVF--AKTDGKDLIFWNT 406
Query: 223 MIAGYVRN----DDLASARKLLDGMT-HPIAVAWNAMI-----SGYVRHGLYEEAFDTFR 272
+I G RN + LA +LL + P V ++ +G+V G+ + F +
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGI--QIFSSME 464
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
K H G+ Y +I G+ N + + + +PS H
Sbjct: 465 KAH--GVNPGNEHYACIIELLCRVGMINEAKDIAD---KIPFEPSSH 506
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 55/347 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ +T +L Y+ + + A ++F+ ++ ++++AM+ Y N A ++F +
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLD--FKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 130 M-KRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M D A P + +L + + + +HC VK G + +V NT++S Y
Sbjct: 297 MLVNDNVAMVTPVAIGLILMGCARFGDLSGG-RCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
S + A + F E L KD
Sbjct: 356 YGS---------LCDAFRQFSEIGL--KD------------------------------- 373
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+++N++I+G V + EE+F F +M + GI+ D T +++A + G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
Y V S+ NAL+ YTKCGKL A+ VFD M RD+VSWN +L G+
Sbjct: 434 YC----VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+EA +F + E + +T ++S + SG +E +LFN M
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 6/139 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIA--VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
Y +++ AR + D + HP +AW+ MI Y + E+A D + KM + G++ +Y
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
TY ++ A + G+ +H++V + + V AL+ FY KCG+L A +V
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATD----MYVCTALVDFYAKCGELEMAIKV 160
Query: 345 FDKMPVRDLVSWNAILSGY 363
FD+MP RD+V+WNA++SG+
Sbjct: 161 FDEMPKRDMVAWNAMISGF 179
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 48/297 (16%)
Query: 81 YSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
Y++ V+LA +F+ P + I+++ M++AY+ N A+ L+ +M G P +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 141 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 200
++ VL A CA ++ L+
Sbjct: 105 TYPFVLKA---------------------------------------CAGLRAIDDGKLI 125
Query: 201 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
S D A D T ++ Y + +L A K+ D M VAWNAMISG+
Sbjct: 126 HSHVNCSDFAT----DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 261 HGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
H + F M + G+ + T + A G G+ +H Y R
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND-- 239
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
L V ++ Y K ++ AR VFD ++ V+W+A++ GY+ ++EA +F
Sbjct: 240 --LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 53/283 (18%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+ + T++S Y+ G++ A + F + + L+D ISYN+++ N + +LF
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQF--SEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M+ G PD + VL A S +A H H V G S+ N L+ Y C
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALG-HGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L A+++ D M V
Sbjct: 459 K------------------------------------------LDVAKRVFDTMHKRDIV 476
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+WN M+ G+ HGL +EA F M G+ DE T +++SA ++GL + G+QL +
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 310 LR---TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
R V+ +H+ N + + G L +A + +KMP
Sbjct: 537 SRGDFNVIPRIDHY-----NCMTDLLARAGYLDEAYDFVNKMP 574
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 136/279 (48%), Gaps = 58/279 (20%)
Query: 179 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 238
N +++C+ CC +L S ++ KL E D + +++ G+ R + ++ A
Sbjct: 124 NIVINCFCCCFQVSLALS--ILGKMLKLGYEP-----DRVTIGSLVNGFCRRNRVSDAVS 176
Query: 239 LLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
L+D M P VA+NA+I + +AFD F+++ GI+ + TYT+L++
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP----- 349
N+ ++ +L + +++ + P+ + +AL+ + K GK+++A+E+F++M
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPN----VITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 350 ----------------------------------VRDLVSWNAILSGYINARRLEEAKFI 375
+ D+VS+N +++G+ A+R+E+ +
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 376 FREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
FRE+ +R N +T+ +I G ++G +++ + F+QM
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 176/407 (43%), Gaps = 63/407 (15%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+LA +I +L G+ + L++ +C+ + + A L DK
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM--------------- 181
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
V++ K P D ++YNA++ + + A F ++R G P+ +
Sbjct: 182 -----VEIGYK-----P----DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 142 FSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPV 198
++ ++ L W +L D++K + P+V+ + LL ++ + ++E
Sbjct: 228 YTALVNG--LCNSSRWSDAARLLSDMIKKKI--TPNVITYSALLDAFV--KNGKVLE--- 278
Query: 199 LMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTHP----IAVAWN 252
A++LF+E D +++++I G +D + A ++ D M V++N
Sbjct: 279 ----AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 334
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
+I+G+ + E+ FR+M G+ + TY +LI F G + ++ + +
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARR 368
+ P + N L+ G+L +A +F+ M R D+V++ ++ G +
Sbjct: 395 GISPD----IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 369 LEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
+EEA +F + + L +T+T M+SGL G E L+ +MK
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 246 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 305
P V +N ++S V+ Y+ +KM +GI+ D YT+ +I+ + +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 306 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM------PVRDLVSWNAI 359
+L+ +P I +L+ + + ++ A + DKM P D+V++NAI
Sbjct: 143 LGKMLKLGYEPDRVTI----GSLVNGFCRRNRVSDAVSLVDKMVEIGYKP--DIVAYNAI 196
Query: 360 LSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +R+ +A F+E+ + N++T+T +++GL S ++ +L + M
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 168/380 (44%), Gaps = 40/380 (10%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL--RDTISYNAM 110
S + + + P++ + +++ G++ LA L N + + Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 111 VKA---YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDV 166
+ + Y H D A+ LF M+ G P+ ++S+++ L E W +L D+
Sbjct: 267 IDSLCKYRHEDD---ALNLFTEMENKGVRPNVITYSSLISC--LCNYERWSDASRLLSDM 321
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTM 223
++ + N L+ ++ LVE A KL+DE + + +P +++++
Sbjct: 322 IERKINPNVVTFNALIDAFV--KEGKLVE-------AEKLYDEM-IKRSIDPDIFTYSSL 371
Query: 224 IAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
I G+ +D L A+ + + M P V +N +I+G+ + +E + FR+M G+
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ TYT+LI F +C V + +V H + N L+ K GKL
Sbjct: 432 VGNTVTYTTLIHGFFQAR--DCDNA--QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 340 QAREVFDKMPVRDL----VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMI 391
+A VF+ + + ++N ++ G A ++E+ +F + + +++ + MI
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 392 SGLAESGFGEESLKLFNQMK 411
SG G EE+ LF +M+
Sbjct: 548 SGFCRKGLKEEADALFRKMR 567
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 28/250 (11%)
Query: 44 NRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--AT 97
N LID + K + A L+D ++ +PDIF+ ++L++ + + A+ +F +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
+ ++YN ++ + V+LF M + G + +++T++ A +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF-FQARDCD 452
Query: 158 HCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK 215
+ Q + +V GV P+++ NTLL C + L ++ V+ ++ K
Sbjct: 453 NAQMVFKQMVSDGVH--PNIMTYNTLLDGL--CKNGKLEKAMVVFEYLQR--------SK 500
Query: 216 DEPS---WTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAF 268
EP+ + MI G + + L ++ P + +N MISG+ R GL EEA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 269 DTFRKMHSMG 278
FRKM G
Sbjct: 561 ALFRKMREDG 570
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 162/382 (42%), Gaps = 84/382 (21%)
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCD 165
Y +++ H++ A+ LF M + P F F+ +L A++ + + + L
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL-VISLGEK 110
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS------------ 213
+ + G+ N L++C+ C S + + L+ KL E +
Sbjct: 111 MQRLGISHNLYTYNILINCF--CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 214 ------------------QKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAW 251
+ D ++TT+I G ++ + A L+D M P V +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 252 NAMISGYVRHGLYEEAF-----------------------------------DTFRKMHS 276
+++G + G + AF + F +M +
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
G++ + TY+SLIS N ++ +L + ++ + P+ + NALI + K G
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN----VVTFNALIDAFVKEG 344
Query: 337 KLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWT 388
KLV+A +++D+M R D+ +++++++G+ RL+EAK +F + + N++T+
Sbjct: 345 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 404
Query: 389 VMISGLAESGFGEESLKLFNQM 410
+I+G ++ +E ++LF +M
Sbjct: 405 TLINGFCKAKRIDEGVELFREM 426
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 50/332 (15%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSA------YSAAGNV--K 88
+I + +ID CK + A +LF + N P++ + ++L+S +S A +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 89 LAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA 148
+ E+ N VT +NA++ A+ A KL+ M + PD F++S+++
Sbjct: 321 MIERKINPNVVT------FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 149 MSL--IAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMASAR 204
+ +E H +L C P+V+ NTL++ + C + + E
Sbjct: 375 FCMHDRLDEAKHMFELMISKD-----CFPNVVTYNTLINGF--CKAKRIDEGV------- 420
Query: 205 KLFDEAPLSQK----DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMIS 256
+LF E +SQ+ + ++TT+I G+ + D +A+ + M HP + +N ++
Sbjct: 421 ELFRE--MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
G ++G E+A F + ++ YTY +I G G L + V+P
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKM 348
+ + N +I+ + + G +A +F KM
Sbjct: 539 D----VIIYNTMISGFCRKGLKEEADALFRKM 566
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 165/401 (41%), Gaps = 67/401 (16%)
Query: 30 HILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP----DIFSRTTLLSAYSAAG 85
++ TGF+ + ++ + CKS A L K D + ++ G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 86 NVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFS 143
++ A LFN + D I Y +++ + + KL M + PD +FS
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 144 TVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++ + E + ++LH ++++ G+ SP
Sbjct: 322 ALIDC--FVKEGKLREAEELHKEMIQRGI------------------------SP----- 350
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGY 258
D ++T++I G+ + + L A +LD M P +N +I+GY
Sbjct: 351 -------------DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
+ L ++ + FRKM G+ D TY +LI G ++L ++ V+P
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD- 456
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKF 374
I+S L+ G+ +A E+F+K+ D+ +N I+ G NA ++++A
Sbjct: 457 --IVSY-KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 375 IFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F +P + ++ T+ +MI GL + G E+ LF +M+
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 137/289 (47%), Gaps = 24/289 (8%)
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G+ PD +FST++ + L +L +V+ G LN L++ C + +
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVS-EALELVDRMVEMGHKPTLITLNALVNGL--CLNGKV 193
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI----AV 249
++ +L+ ++ + Q +E ++ ++ ++ A A +LL M AV
Sbjct: 194 SDAVLLID---RMVETG--FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
++ +I G + G + AF+ F +M G + D YT+LI G ++ G +L +
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYIN 365
++ + P + +ALI + K GKL +A E+ +M R D V++ +++ G+
Sbjct: 309 IKRKITPD----VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 366 ARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+L++A + + + N+ T+ ++I+G ++ ++ L+LF +M
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 111/280 (39%), Gaps = 22/280 (7%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
A +H ++ G + LID +CK + + A+H+ D K P+I + L++
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 80 AYSAAGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
Y A + +LF + + DT++YN +++ + A +LF M P
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D S+ +L + E E + + K + + N ++ +C AS
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFE-KIEKSKMELDIGIYNIIIH-GMCNASK------ 507
Query: 198 VLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAW 251
+ A LF PL + D ++ MI G + L+ A RK+ + P +
Sbjct: 508 --VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
N +I ++ G ++ ++ G +D T ++
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 139/337 (41%), Gaps = 80/337 (23%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+ +LLS YS G A KLF ++ DT+++N M+ Y + ++ F M
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRM--MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G PD +FS++L ++S E+ C+Q+HC +++ + L+ L+
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEY-CKQIHCYIMRHSIS-----LDIFLT---------- 378
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ +I Y + ++ A+ + V + A
Sbjct: 379 ---------------------------SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
MISGY+ +GLY ++ + FR + + I +E T S++ GR+LH ++++
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
++ A+I Y KCG++ A E+F++
Sbjct: 472 FDNR----CNIGCAVIDMYAKCGRMNLAYEIFER-------------------------- 501
Query: 374 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ +R++++W MI+ A+S ++ +F QM
Sbjct: 502 -----LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 58/366 (15%)
Query: 50 YCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNA 109
YCK + H + + DIF + L+ AY V +A+ +F+ D + + A
Sbjct: 358 YCKQIHCYIMRH----SISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV--DVVVFTA 411
Query: 110 MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKW 169
M+ Y HN ++++F + + +P+ + ++L + ++ + ++LH ++K
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG-RELHGFIIKK 470
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVR 229
G C I CA + M A ++F+ LS++D SW +MI +
Sbjct: 471 GFDN---------RCNIGCAVIDMYAKCGRMNLAYEIFER--LSKRDIVSWNSMITRCAQ 519
Query: 230 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
+D +P A A D FR+M GI D + ++
Sbjct: 520 SD-------------NPSA------------------AIDIFRQMGVSGICYDCVSISAA 548
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
+SA N + G+ +H ++++ + + + LI Y KCG L A VF M
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVY----SESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 350 VRDLVSWNAILSGYINARRLEEAKFIFREVPER-----NLLTWTVMISGLAESGFGEESL 404
+++VSWN+I++ N +L+++ +F E+ E+ + +T+ +IS G +E +
Sbjct: 605 EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 405 KLFNQM 410
+ F M
Sbjct: 665 RFFRSM 670
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+++I Y+ + KL D + V WN M++GY + G + F M I
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+ T+ ++S + L + G QLH V+ + V F S+ N+L++ Y+KCG+
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD----FEGSIKNSLLSMYSKCGRFDD 292
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
A ++F M D V+WN ++SGY+ + +EE+ F E+ +L + S L S
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 401 EESLKLFNQM 410
E+L+ Q+
Sbjct: 353 FENLEYCKQI 362
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 129/342 (37%), Gaps = 85/342 (24%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
L R +H I+ GF I +ID+Y K + A+ +F++
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER----------------- 501
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
++ RD +S+N+M+ + + + AA+ +F +M G D S
Sbjct: 502 ----------------LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S L A + + E + + +H ++K +
Sbjct: 546 SAALSACANLPSESFG-KAIHGFMIKHSL------------------------------- 573
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
D S +T+I Y + +L +A + M V+WN++I+ HG
Sbjct: 574 -----------ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622
Query: 263 LYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQP-SEH 319
+++ F +M GI+ D+ T+ +IS+ + G + G R + +QP EH
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPV-RDLVSWNAIL 360
+ ++ + + G+L +A E MP D W +L
Sbjct: 683 YA-----CVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
WN++IS +VR+GL +A + KM G+ D T+ L+ A F G + +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTV 164
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
++ F+ S +LI Y + GK+ ++FD++ +D V WN +L+GY L+
Sbjct: 165 SSLGMDCNEFVAS---SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
DE + I Y + + +ARK+ D +WNA+I G G EA + F M
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK 210
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
G++ D++T S+ ++ G + QLH VL+ + ++ N+LI Y KC
Sbjct: 211 RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML--NSLIDMYGKC 268
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE----RNLLTWTVMI 391
G++ A +F++M R++VSW++++ GY EA FR++ E N +T+ ++
Sbjct: 269 GRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVL 328
Query: 392 SGLAESGFGEESLKLFNQMK 411
S G EE F MK
Sbjct: 329 SACVHGGLVEEGKTYFAMMK 348
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 65/316 (20%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F + ++ Y AG + A K+F+ P R S+NA++ +H + AV++FV
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPE--RKLGSWNAIIGGLNHAGRANEAVEMFVD 208
Query: 130 MKRDGFAPDPFSFSTV------LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV--LNTL 181
MKR G PD F+ +V LG +SL QLH V++ + LN+L
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSL-------AFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
+ Y C L A +F+E + Q++ SW++MI GY N +
Sbjct: 262 IDMYGKCGRMDL---------ASHIFEE--MRQRNVVSWSSMIVGYAANGNTL------- 303
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
EA + FR+M G++ ++ T+ ++SA + GL
Sbjct: 304 ------------------------EALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 302 GRQLHAYVLRTV-VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAI 359
G+ A + ++P LS ++ ++ G+L +A++V ++MP++ +++ W +
Sbjct: 340 GKTYFAMMKSEFELEPG----LSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 360 LSGYINARRLEEAKFI 375
+ G +E A+++
Sbjct: 396 MGGCEKFGDVEMAEWV 411
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
++LD +PIA WN ++ Y+RH +A + M + D Y+ +I A+
Sbjct: 74 RILD--QYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH 131
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
F G++LH+ +R E + IT Y K G+ AR+VFD+ P R L SWN
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEF----CESGFITLYCKAGEFENARKVFDENPERKLGSWN 187
Query: 358 AILSGYINARRLEEAKFIFREVPERNL 384
AI+ G +A R EA +F ++ L
Sbjct: 188 AIIGGLNHAGRANEAVEMFVDMKRSGL 214
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 15/220 (6%)
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
M A K+FDE P +++ +W MI G D A L+ M + V+W +I GY
Sbjct: 174 MIDAHKVFDEMP--ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 260 RHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
R +EA F +M + I+ +E T +++ A +N G +HAYV + P +
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMP--VRDLVSWNAILSGYINARRLEEAKFIF 376
+ V N+LI Y KCG + A + F ++P ++LVSW ++S + +EA +F
Sbjct: 292 ---IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMF 348
Query: 377 REVPER-----NLLTWTVMISGLAESGFGEES-LKLFNQM 410
+++ ER N +T +++ + G EE L+ FN M
Sbjct: 349 KDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 138/338 (40%), Gaps = 64/338 (18%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF 94
GF ++ L+ +Y N+ AH +FD+ P + + +++ + G+ + A
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 95 NATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR-DGFAPDPFSFSTVLGAMSLIA 153
P R +S+ ++ Y+ A+ LF RM D P+ + +L A+ +
Sbjct: 213 EKMPN--RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 154 EEEWHCQQLHCDVVKWG-VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPL 212
+ + C +H V K G V C V N+L+ Y C + SA K F E P
Sbjct: 271 DLKM-CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC---------IQSAFKFFIEIPN 320
Query: 213 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 272
+K+ SWTT MIS + HG+ +EA F+
Sbjct: 321 GRKNLVSWTT-------------------------------MISAFAIHGMGKEAVSMFK 349
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGL--------FNCGRQLHAYVLRTVVQPSEHFILSV 324
M +G++ + T S+++A + GL FN ++ Y + V+ H+
Sbjct: 350 DMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNT--MVNEYKITPDVK---HY---- 400
Query: 325 NNALITFYTKCGKLVQAREVFDKMPVRD-LVSWNAILS 361
L+ + G+L +A ++ ++P+ + V W +L
Sbjct: 401 -GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 268 FDTFRKMHSMGIQ------MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
+D +++H + D +TY L+ AS N + + + L + H
Sbjct: 100 YDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESH-- 157
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 381
+ V AL+ Y G ++ A +VFD+MP R+ V+WN +++G N E+A ++P
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 382 RNLLTWTVMISGLAESGFGEESLKLFNQM 410
R +++WT +I G A +E++ LF++M
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRM 246
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 56/347 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTI-SYNAMVKAYSHNLDGHAAVKLFV 128
DI T+L+ AYS G + AE+L+ + +D+I ++V Y+ D AV F
Sbjct: 280 DISVVTSLVCAYSRCGCLVSAERLYASAK---QDSIVGLTSIVSCYAEKGDMDIAVVYFS 336
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
+ ++ D + +L + + LH +K G+ C
Sbjct: 337 KTRQLCMKIDAVALVGILHGCKKSSHIDIG-MSLHGYAIKSGL----------------C 379
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ +V + M Y + DD+ + L + +
Sbjct: 380 TKTLVVNGLITM--------------------------YSKFDDVETVLFLFEQLQETPL 413
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
++WN++ISG V+ G AF+ F +M + G+ D T SL++ N G++LH
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHG 473
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
Y LR + +E+F+ + ALI Y KCG VQA VF + +WN+++SGY +
Sbjct: 474 YTLRNNFE-NENFVCT---ALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
A + E+ E+ L +T+ ++S GF +E F M
Sbjct: 530 LQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAM 576
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T+++ Y++ + SA+ L D M V WNA+I GY R+G +A+ F M G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
T +L+ G + GR +H ++ ++ V NALI+FY+KC +L
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ----VKNALISFYSKCAELGS 204
Query: 341 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 400
A +F +M + VSWN ++ Y + EEA +F+ + E+N+ V I L +
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS 264
Query: 401 EESL 404
E L
Sbjct: 265 HEPL 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 138/337 (40%), Gaps = 61/337 (18%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDG 120
HL + ++ +T+LL+ Y G V A+ LF+ P RDT+ +NA++ YS N
Sbjct: 75 HLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPE--RDTVVWNALICGYSRNGYE 132
Query: 121 HAAVKLFVRMKRDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
A KLF+ M + GF+P + +L G +++ + +H K G+ V
Sbjct: 133 CDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG----RSVHGVAAKSGLELDSQV 188
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N L+S Y CA + SA LF E + K SW TMI Y ++
Sbjct: 189 KNALISFYSKCAE---------LGSAEVLFRE--MKDKSTVSWNTMIGAYSQS------- 230
Query: 238 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
GL EEA F+ M +++ T +L+SA +
Sbjct: 231 ------------------------GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSH- 265
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
LH V++ + +SV +L+ Y++CG LV A ++ +V
Sbjct: 266 -----EPLHCLVVKCGMVND----ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLT 316
Query: 358 AILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 394
+I+S Y ++ A F + + + V + G+
Sbjct: 317 SIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGI 353
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T +I Y + + A + + P WN+MISGY GL A + +M G++
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLK 547
Query: 281 MDEYTYTSLISASFNTGLFNCGR-QLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKL 338
DE T+ ++SA + G + G+ A + + P+ +H+ L ++ +
Sbjct: 548 PDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYAL-----MVGLLGRACLF 602
Query: 339 VQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFRE---VPERNLLTWTVMISGL 394
+A + KM ++ D W A+LS I R LE +++ R+ + +N + +M +
Sbjct: 603 TEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLY 662
Query: 395 AESGFGEESLKLFNQMK 411
A ++ +++ N MK
Sbjct: 663 ATEAMWDDVVRVRNMMK 679
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 167/380 (43%), Gaps = 40/380 (10%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL--RDTISYNAM 110
S + + + P++ + +++ G+ LA L N D + +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 111 VKA---YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDV 166
+ + Y H D A+ LF M+ G P+ ++S+++ L + W QL D+
Sbjct: 267 IDSLCKYRHVDD---ALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQLLSDM 321
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTM 223
++ + N L+ ++ VE A KL+D+ + + +P ++ ++
Sbjct: 322 IEKKINPNLVTFNALIDAFV--KEGKFVE-------AEKLYDDM-IKRSIDPDIFTYNSL 371
Query: 224 IAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
+ G+ +D L A+++ + M P V +N +I G+ + E+ + FR+M G+
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
D TYT+LI F+ G + +++ ++ V P + + L+ GKL
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD----IMTYSILLDGLCNNGKLE 487
Query: 340 QAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMI 391
+A EVFD M D+ + ++ G A ++++ +F + + N++T+ MI
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 392 SGLAESGFGEESLKLFNQMK 411
SGL +E+ L +MK
Sbjct: 548 SGLCSKRLLQEAYALLKKMK 567
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 22/266 (8%)
Query: 44 NRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--AT 97
N LID + K A L+D ++ +PDIF+ +L++ + + A+++F +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
D ++YN ++K + + +LF M G D +++T++ + + +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD- 452
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ--K 215
+ Q++ +V GV P ++ + C + L A ++FD S+
Sbjct: 453 NAQKVFKQMVSDGV--PPDIMTYSILLDGLCNNGKL-------EKALEVFDYMQKSEIKL 503
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTF 271
D +TTMI G + + L ++ P V +N MISG L +EA+
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTG 297
+KM G + TY +LI A G
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDG 589
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 163/380 (42%), Gaps = 40/380 (10%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL--RDTISYNAM 110
S + + K PD+ + +++ G LA L N D + Y+ +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 111 VKA---YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDV 166
+ + Y H D A+ LF M G PD F++S+++ L W +L D+
Sbjct: 247 IDSLCKYRHVDD---ALNLFTEMDNKGIRPDVFTYSSLISC--LCNYGRWSDASRLLSDM 301
Query: 167 VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTM 223
++ + N+L+ + L+E A KLFDE + + +P ++ ++
Sbjct: 302 LERKINPNVVTFNSLIDAF--AKEGKLIE-------AEKLFDEM-IQRSIDPNIVTYNSL 351
Query: 224 IAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
I G+ +D L A+++ M P V +N +I+G+ + + + FR M G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ TYT+LI F +C V + +V H + N L+ K GKL
Sbjct: 412 VGNTVTYTTLIHGFFQAS--DCDNA--QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 340 QAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMI 391
+A VF+ + D+ ++N + G A ++E+ +F + + +++ + MI
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 392 SGLAESGFGEESLKLFNQMK 411
SG + G EE+ LF +MK
Sbjct: 528 SGFCKKGLKEEAYTLFIKMK 547
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 43/296 (14%)
Query: 20 TQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRT 75
+ L R I+ +++T N LID + K + A LFD ++ +P+I +
Sbjct: 299 SDMLERKINPNVVTF---------NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 76 TLLSAYSAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+L++ + + A+++F + L D ++YN ++ + ++LF M R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASS 191
G + +++T++ A + + Q + +V GV P+++ NTLL C +
Sbjct: 410 GLVGNTVTYTTLIHGF-FQASDCDNAQMVFKQMVSDGVH--PNIMTYNTLLDGL--CKNG 464
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG--------- 242
L ++ V+ +K K EP T + ++ + A K+ DG
Sbjct: 465 KLEKAMVVFEYLQK--------SKMEPDIYTY---NIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 243 -MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
P +A+N MISG+ + GL EEA+ F KM G D TY +LI A G
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 154/346 (44%), Gaps = 42/346 (12%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFN- 95
+I + +ID CK ++ A +LF + N PD+F+ ++L+S G A +L +
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 96 -----ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS 150
P + +++N+++ A++ A KLF M + P+ ++++++
Sbjct: 301 MLERKINP----NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 151 LIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLM--ASARKL 206
+ + QQ+ +V C+P V+ NTL++ + C + +V+ L S R L
Sbjct: 357 M-HDRLDEAQQIFTLMVSKD--CLPDVVTYNTLINGF--CKAKKVVDGMELFRDMSRRGL 411
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHG 262
+ ++TT+I G+ + D +A+ + M HP + +N ++ G ++G
Sbjct: 412 VG-------NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
E+A F + ++ D YTY + G G L + V+P +
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD----V 520
Query: 323 SVNNALITFYTKCGKLVQAREVFDKM----PVRDLVSWNAILSGYI 364
N +I+ + K G +A +F KM P+ D ++N ++ ++
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 153/362 (42%), Gaps = 76/362 (20%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLF------NATPVTLRDTISYNAMVKAYSHNLDGHA 122
PDI TTL+ + G + A K+ A P D I+YN M+ Y + +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP----DVITYNVMISGYCKAGEINN 190
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
A+ + RM +PD +++T+L ++ CD K VL+ +L
Sbjct: 191 ALSVLDRMS---VSPDVVTYNTILRSL--------------CDSGKLKQ--AMEVLDRML 231
Query: 183 S--CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 240
CY D ++T +I R+ + A KLL
Sbjct: 232 QRDCY-----------------------------PDVITYTILIEATCRDSGVGHAMKLL 262
Query: 241 DGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
D M P V +N +++G + G +EA M S G Q + T+ ++ + +T
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 297 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----D 352
G + +L A +LR PS + N LI F + G L +A ++ +KMP +
Sbjct: 323 GRWMDAEKLLADMLRKGFSPS----VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFN 408
+S+N +L G+ ++++ A + R +++T+ M++ L + G E+++++ N
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 409 QM 410
Q+
Sbjct: 439 QL 440
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 175/394 (44%), Gaps = 48/394 (12%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFN---- 95
N ++ C S + A + D+ PD+ + T L+ A V A KL +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 96 --ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIA 153
TP D ++YN +V A+K M G P+ + + +L S+ +
Sbjct: 268 RGCTP----DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL--RSMCS 321
Query: 154 EEEW-HCQQLHCDVVKWGVMCVPSVLN-TLLSCYICCASSTLVESPVLMASARKLFDEAP 211
W ++L D+++ G PSV+ +L ++C L+ A + ++ P
Sbjct: 322 TGRWMDAEKLLADMLRKGF--SPSVVTFNILINFLC--------RKGLLGRAIDILEKMP 371
Query: 212 L--SQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYE 265
Q + S+ ++ G+ + + A + L+ M +P V +N M++ + G E
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 266 EAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN 325
+A + ++ S G TY ++I GL G+ A L ++ + ++
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVID-----GLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 326 -NALITFYTKCGKLVQAREV---FDKMPVR-DLVSWNAILSGYINARRLEEA----KFIF 376
++L+ ++ GK+ +A + F++M +R + V++N+I+ G +R+ + A F+
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 377 REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ N ++T++I GLA G +E+L+L N++
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 155/357 (43%), Gaps = 29/357 (8%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFV 128
PD+ + ++S Y AG + A + + V+ D ++YN ++++ + A+++
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS-PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 129 RMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
RM + PD ++ T+L + H +L ++ G C P V+ + C
Sbjct: 229 RMLQRDCYPDVITY-TILIEATCRDSGVGHAMKLLDEMRDRG--CTPDVVTYNVLVNGIC 285
Query: 189 ASSTLVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH- 245
L E A K ++ P S Q + + ++ A KLL M
Sbjct: 286 KEGRLDE-------AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 246 ---PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
P V +N +I+ R GL A D KM G Q + +Y L+ +
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD-- 396
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD----LVSWNA 358
R + Y+ R V + I++ N ++T K GK+ A E+ +++ + L+++N
Sbjct: 397 RAIE-YLERMVSRGCYPDIVTYN-TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 359 ILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
++ G A + +A + E+ ++L +T++ ++ GL+ G +E++K F++ +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 149/348 (42%), Gaps = 53/348 (15%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
+ +I L+++Y G +F+ ++ R+ I+ A++ N ++LF
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDG--MSHRNVITLTAVISGLIENELHEDGLRLF 244
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 187
M+R P+ ++ + L A S ++ QQ+H + K+G+ + + L+ Y
Sbjct: 245 SLMRRGLVHPNSVTYLSALAACSG-SQRIVEGQQIHALLWKYGIESELCIESALMDMYSK 303
Query: 188 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 247
C S + A +F+ ++ DE S T ++ G +N
Sbjct: 304 CGS---------IEDAWTIFEST--TEVDEVSMTVILVGLAQN----------------- 335
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
G EEA F +M G+++D ++++ SF G+QLH+
Sbjct: 336 --------------GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 367
V++ + VNN LI Y+KCG L ++ VF +MP R+ VSWN++++ +
Sbjct: 382 LVIKRKFSGNTF----VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHG 437
Query: 368 RLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
A ++ E+ + +T+ ++ + G ++ +L N+MK
Sbjct: 438 HGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMK 485
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 74 RTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD 133
+ L+ YS G+++ A +F +T T D +S ++ + N A++ F+RM +
Sbjct: 294 ESALMDMYSKCGSIEDAWTIFEST--TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA 351
Query: 134 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 193
G D S VLG +S I +QLH V+K V N L++ Y C
Sbjct: 352 GVEIDANVVSAVLG-VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGD--- 407
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
+ ++ +F P +++ SW +MIA + R+
Sbjct: 408 ------LTDSQTVFRRMP--KRNYVSWNSMIAAFARHG---------------------- 437
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL--HAYVLR 311
HGL A + +M ++ ++ + T+ SL+ A + GL + GR+L +
Sbjct: 438 -------HGL--AALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVH 488
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 361
+ +EH+ +I + G L +A+ D +P++ D W A+L
Sbjct: 489 GIEPRTEHY-----TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 279
W ++++ Y + L A KL D M ++ N + G++R+ E F ++M G
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG- 151
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
D T T ++S + +HA + + +SV N LIT Y KCG V
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKE----ISVGNKLITSYFKCGCSV 207
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 376
R VFD M R++++ A++SG I E+ +F
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF 244
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 301 CGRQ---------LHAYVLRT--VVQPSEHFI----LSVNNALITFYTKCGKLVQAREVF 345
CGR+ LHA +++ +P + I L V N+L++ Y KCGKLV A ++F
Sbjct: 54 CGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLF 113
Query: 346 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
D+MP+RD++S N + G++ R E + + +
Sbjct: 114 DEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM 147
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 147/345 (42%), Gaps = 55/345 (15%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D+F +L+ YS +V A ++F+ T T R+ +S+N+++ + HN A+++F
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDET--TCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 130 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
M ++ D + ++L E+ C+ +H +++ G L++L+ Y C+
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFF-EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCS 377
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
L D+A +LD MT+ V
Sbjct: 378 ----------------LVDDAG--------------------------TVLDSMTYKDVV 395
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+ + MISG G +EA F M + T SL++A + + H
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R + ++ +SV +++ Y KCG + AR FD++ ++++SW I+S Y
Sbjct: 453 IRRSLAIND---ISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLP 509
Query: 370 EEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++A +F E+ ++ N +T+ +S G ++ L +F M
Sbjct: 510 DKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 52/307 (16%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F ++ Y G++ + F+ + RD++S+N +V + F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDC--MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL 118
Query: 131 KRDGFAPDPFSFSTVLGAM-SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 189
+ GF P+ + V+ A SL + E ++H V++ G + SV N++L Y
Sbjct: 119 RVWGFEPNTSTLVLVIHACRSLWFDGE----KIHGYVIRSGFCGISSVQNSILCMY---- 170
Query: 190 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 249
+S L SARKLFDE +S++D SW+ +I YV++ + KL M H
Sbjct: 171 ----ADSDSL--SARKLFDE--MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
+ D T TS++ A + GR +H +
Sbjct: 223 ------------------------------EPDCVTVTSVLKACTVMEDIDVGRSVHGFS 252
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 369
+R ++ F+ N+LI Y+K + A VFD+ R++VSWN+IL+G+++ +R
Sbjct: 253 IRRGFDLADVFVC---NSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRY 309
Query: 370 EEAKFIF 376
+EA +F
Sbjct: 310 DEALEMF 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 150/362 (41%), Gaps = 86/362 (23%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
IH +++ +GF ++N ++ +Y S ++ A LFD+
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE--------------- 187
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFSF 142
RD IS++ ++++Y + + +KLF M + PD +
Sbjct: 188 ------------------RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
++VL A +++ + + V V S
Sbjct: 230 TSVLKACTVMEDID-------------------------------------VGRSVHGFS 252
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
R+ FD A D ++I Y + D+ SA ++ D T V+WN++++G+V +
Sbjct: 253 IRRGFDLA-----DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQ 307
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLIS-ASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
Y+EA + F M +++DE T SL+ F C + +H ++R + +E +
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC-KSIHGVIIRRGYESNEVAL 366
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF---RE 378
++LI YT C + A V D M +D+VS + ++SG +A R +EA IF R+
Sbjct: 367 ----SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD 422
Query: 379 VP 380
P
Sbjct: 423 TP 424
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y++ DL S + D M +V+WN ++ G + +G EE F K+ G + + T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+I A L+ G ++H YV+R+ I SV N+++ Y L AR++FD
Sbjct: 131 VLVIHAC--RSLWFDGEKIHGYVIRSGFCG----ISSVQNSILCMYADSDSL-SARKLFD 183
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
+M RD++SW+ ++ Y+ ++ +F+E+
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM 216
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 157/378 (41%), Gaps = 47/378 (12%)
Query: 23 LARAIHAHILTTGFRLTPL-IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
+ R++H + GF L + + N LID+Y K ++ A +FD+T +I S ++L+ +
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303
Query: 82 SAAGNVKLAEKLFN-----ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
A ++F+ A V +S + K + L + + +R G+
Sbjct: 304 VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR---GYE 360
Query: 137 PDPFSFSTVLGAM--------------SLIAEEEWHCQQLHCDVVKWG-------VMC-- 173
+ + S+++ A S+ ++ C + + G + C
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 174 --VPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
P+ + + C S+ L S A + L+ D T+++ Y +
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKW----AHGIAIRRSLAINDISVGTSIVDAYAKCG 476
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ AR+ D +T ++W +IS Y +GL ++A F +M G + TY + +S
Sbjct: 477 AIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALS 536
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMP- 349
A + GL G + ++ +PS +H+ + ++ ++ G++ A E+ +P
Sbjct: 537 ACNHGGLVKKGLMIFKSMVEEDHKPSLQHY-----SCIVDMLSRAGEIDTAVELIKNLPE 591
Query: 350 -VRDLVS-WNAILSGYIN 365
V+ S W AILSG N
Sbjct: 592 DVKAGASAWGAILSGCRN 609
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 174/397 (43%), Gaps = 52/397 (13%)
Query: 41 LIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGN----VKLAEKLFNA 96
++RNRL DI + + P P I LLSA + + L E++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM--Q 110
Query: 97 TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE 156
T D +Y+ + + A+ + +M + G+ PD + S++L
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG-------- 162
Query: 157 WHCQQLHCDVVKWGVMCVPSVL------NTLLSCYICCASSTLVESPVL---MASARKLF 207
+C H + V V ++ +T +TL+ L + A L
Sbjct: 163 -YC---HSKRISDAVALVDQMVEMGYKPDTF-------TFTTLIHGLFLHNKASEAVALV 211
Query: 208 DEAPL--SQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRH 261
D+ Q D ++ T++ G + D+ A LL+ M V +N +I ++
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 321
E A D F +M + GI+ + TY SLI+ N G ++ +L + +L + P+
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN---- 327
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFR 377
+ NALI + K GKLV+A ++ ++M R D +++N +++G+ RL+EAK +F+
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 378 EVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ + N+ T+ +I+G + E+ ++LF +M
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 158/376 (42%), Gaps = 56/376 (14%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL--RDTISYNAM 110
S + + + PD+ + T+++ G++ LA L N + + +N +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 111 VKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKW 169
+ + AV LF M+ G P+ ++++++ L W +L ++++
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC--LCNYGRWSDASRLLSNMLEK 322
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK----DEPSWTTMIA 225
+ N L+ + LVE A KL +E + Q+ D ++ +I
Sbjct: 323 KINPNVVTFNALIDAFF--KEGKLVE-------AEKLHEE--MIQRSIDPDTITYNLLIN 371
Query: 226 GYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
G+ ++ L A+++ M P +N +I+G+ + E+ + FR+M G+
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 282 DEYTYTSLISASFNT------------------------------GLFNCGRQLHAYVLR 311
+ TYT++I F GL + G+ A V+
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 312 TVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRL 369
+Q SE + + N +I K GK+ +A ++F + ++ D+V++N ++SG + R L
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 370 EEAKFIFREVPERNLL 385
+EA +FR++ E L
Sbjct: 552 QEADDLFRKMKEDGTL 567
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 165/398 (41%), Gaps = 72/398 (18%)
Query: 35 GFRLTPLIRNRLIDIYCKSS-NIPYAHHLF----DKTPNPDIFSRTTLLSAYSAAGNVKL 89
GF L N ++D +S NI +A ++F + +P++F+ L+ + AGN+ +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 90 AEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLG 147
A LF+ T L + ++YN ++ Y KL M G P+ S++ V+
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 148 AMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE-SPVLMASARKL 206
+ C + E S VL R+
Sbjct: 284 GL--------------------------------------CREGRMKEVSFVLTEMNRRG 305
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDD-----LASARKLLDGMTHPIAVAWNAMISGYVRH 261
+ DE ++ T+I GY + + + A L G+T P + + ++I +
Sbjct: 306 Y------SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKA 358
Query: 262 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHF 320
G A + +M G+ +E TYT+L+ G N AY VLR +
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN-----EAYRVLREMNDNGFSP 413
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIF 376
+ NALI + GK+ A V + M + D+VS++ +LSG+ + ++EA +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 377 REVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
RE+ E+ + +T++ +I G E +E+ L+ +M
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
++ T+I GY + + KLL M P +++N +I+G R G +E +M
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
+ G +DE TY +LI G F+ +HA +LR + PS + +LI K
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS----VITYTSLIHSMCK 357
Query: 335 CGKLVQAREVFDKMPVRDLV----SWNAILSGYINARRLEEAKFIFREVPER----NLLT 386
G + +A E D+M VR L ++ ++ G+ + EA + RE+ + +++T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
+ +I+G +G E+++ + MK
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMK 442
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 183/465 (39%), Gaps = 109/465 (23%)
Query: 44 NRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N LID YCK I L K P++ S +++ G +K E F T +
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK--EVSFVLTEM 301
Query: 100 TLR----DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEE 155
R D ++YN ++K Y + H A+ + M R G P ++++++ +M
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 156 EWHCQQLHCDVVKWGVMC----------------------------------VPSVL--N 179
+ L D ++ +C PSV+ N
Sbjct: 362 NRAMEFL--DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA--- 236
L++ + C + + ++ ++ + E LS D S++T+++G+ R+ D+ A
Sbjct: 420 ALINGH--CVTGKMEDAIAVLEDMK----EKGLS-PDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 237 -RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
R++++ P + ++++I G+ +EA D + +M +G+ DE+TYT+LI+A
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 296 TGLFNCGRQLHAYVLRTVVQPS-------------------------------------- 317
G QLH ++ V P
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 318 -EHFILSVNN-------ALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYIN 365
I + +N +LI + G + +A +VF+ M + D ++N ++ G+
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 366 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
A + +A +++E+ + L TV + L ++ E + N +
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 160/365 (43%), Gaps = 42/365 (11%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKL------FNATPVTLRDTISYNAMVKAYSHNLDGHA 122
P I + +LL+ + + A L F P + + YN ++ N D +
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP----NVVIYNTVINGLCKNRDLNN 202
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTL 181
A+++F M++ G D +++T++ +S W +L D+VK + P+V+
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLS--NSGRWTDAARLLRDMVKRKI--DPNVI--- 255
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARK 238
+ T V+ L+ AR L+ E + + P ++ ++I G+ + L A+
Sbjct: 256 ---FFTALIDTFVKEGNLL-EARNLYKEM-IRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310
Query: 239 LLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
+ D M P V +N +I+G+ + E+ F +M G+ D +TY +LI
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 295 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--- 351
G N +++ ++ V P + N L+ GK+ +A + + +
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPD----IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 352 -DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKL 406
D++++N I+ G +L+EA +FR + + + + + MISGL G E+ KL
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 407 FNQMK 411
+MK
Sbjct: 487 CRRMK 491
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 18/251 (7%)
Query: 46 LIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--ATPV 99
LID + K N+ A +L+ ++ P++F+ +L++ + G + A+ +F+ +
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
D ++YN ++ + + +KLF M G D F+++T++ +
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV-A 378
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 219
Q++ +V GV N LL C C + + ++ V++ +K E + D +
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCL--CNNGKIEKALVMVEDLQK--SEMDV---DIIT 431
Query: 220 WTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMH 275
+ +I G R D L A L +T P A+A+ MISG R GL EA R+M
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 276 SMGIQMDEYTY 286
G E Y
Sbjct: 492 EDGFMPSERIY 502
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 186/432 (43%), Gaps = 56/432 (12%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNI-PYAHHLFDKTPNPDIFSRTTLLSAYS 82
+++H++I+ G L+ N L+ +Y K I P A+ FD + D+ S +++ +S
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 83 AAGNVKLAEKLF----------------NATPV-----------TLRDTISY-------- 107
+ A + F N PV + R SY
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 108 ------NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQ 160
N++V Y A LF RM + D S++ V+ + + EW
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMG----SKDLVSWNVVIAGYA--SNCEWFKAF 314
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
QL ++V G + SV T++S CA T + S + S + + L + D
Sbjct: 315 QLFHNLVHKGDVSPDSV--TIISILPVCAQLTDLASGKEIHS--YILRHSYLLE-DTSVG 369
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
+I+ Y R D ++A M+ ++WNA++ + + + + + I
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+D T SL+ N +++H Y ++ + E + NAL+ Y KCG +
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEP-KLGNALLDAYAKCGNVEY 488
Query: 341 AREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 399
A ++F + R LVS+N++LSGY+N+ ++A+ +F E+ +L TW++M+ AES
Sbjct: 489 AHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCC 548
Query: 400 GEESLKLFNQMK 411
E++ +F +++
Sbjct: 549 PNEAIGVFREIQ 560
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 150/342 (43%), Gaps = 25/342 (7%)
Query: 77 LLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
L+S Y+ G+ A F+ ++ +D IS+NA++ A++ + + L + +
Sbjct: 372 LISFYARFGDTSAAYWAFSL--MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC---VPSVLNTLLSCYICCASSTL 193
D + ++L + + +++H VK G++ P + N LL Y C +
Sbjct: 430 LDSVTILSLL-KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEY 488
Query: 194 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 253
L S R+ S+ ++++GYV + A+ L M+ W+
Sbjct: 489 AHKIFLGLSERRTL----------VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSL 538
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
M+ Y EA FR++ + G++ + T +L+ + RQ H Y++R
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 373
+ + + L+ Y KCG L A VF RDLV + A+++GY R +EA
Sbjct: 599 LGD-----IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653
Query: 374 FIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMK 411
I+ + E N+ + T M++ +G ++ L++++ ++
Sbjct: 654 MIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIR 695
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 161/378 (42%), Gaps = 62/378 (16%)
Query: 1 MDSRTMANLFLAQLNHPSATQTLARAIHAHILTTGF---RLTPLIRNRLIDIYCKSSNIP 57
+DS T+ +L +N + + +H + + G P + N L+D Y K N+
Sbjct: 430 LDSVTILSLLKFCINVQGIGKV--KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVE 487
Query: 58 YAHHLF-DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSH 116
YAH +F + + S +LLS Y +G+ A+ LF T ++ D +++ MV+ Y+
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLF--TEMSTTDLTTWSLMVRIYAE 545
Query: 117 NLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS 176
+ + A+ +F ++ G P+ + +L + +A +Q H +++ G+ +
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHL-VRQCHGYIIRGGLGDI-R 603
Query: 177 VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA 236
+ TLL Y C S + A +F Q D A
Sbjct: 604 LKGTLLDVYAKCGS---------LKHAYSVF------QSD-------------------A 629
Query: 237 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 296
R+ L V + AM++GY HG +EA + M I+ D T++++A +
Sbjct: 630 RRDL--------VMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHA 681
Query: 297 GLFNCGRQLHAYVLRTV--VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 353
GL G Q++ + RTV ++P+ E + +V+ + G+L A +MPV
Sbjct: 682 GLIQDGLQIYDSI-RTVHGMKPTMEQYACAVD-----LIARGGRLDDAYSFVTQMPVEPN 735
Query: 354 VS-WNAILSGYINARRLE 370
+ W +L R++
Sbjct: 736 ANIWGTLLRACTTYNRMD 753
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 182/424 (42%), Gaps = 55/424 (12%)
Query: 24 ARAIHAHILTTGF-------------RLTPLIR--NRLIDIYCKSSNIPYAHHLFDKTPN 68
A A+ +++ TGF LTP++ N LI+ C + A L +K
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 69 P----DIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLDGH- 121
D+ + T+++ G+ K A L + T D + Y+A++ DGH
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK--DGHH 312
Query: 122 -AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVL- 178
A LF M G AP+ F+++ ++ W Q+L D+++ + P VL
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR--WSDAQRLLRDMIEREIN--PDVLT 368
Query: 179 -NTLLSCYICCASSTLVESPVLMASARKLFDEA--PLSQKDEPSWTTMIAGYVRNDDLAS 235
N L+S +++ E + A KL DE D ++ +MI G+ +++
Sbjct: 369 FNALIS-------ASVKEGKLF--EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A+ + D M P V +N +I Y R +E R++ G+ + TY +LI
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR---- 351
N + L ++ V P N L+ + + KL +A E+F+ + +
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDT----ITCNILLYGFCENEKLEEALELFEVIQMSKIDL 535
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLF 407
D V++N I+ G +++EA +F +P E ++ T+ VMISG ++ LF
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 408 NQMK 411
++MK
Sbjct: 596 HKMK 599
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 33/327 (10%)
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL-------------- 151
S+N ++K + ++ F ++ + GF PD +F+T+L + L
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 152 IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAP 211
+ L +V+ G+ V NTL++ C ++E+ L+ K+ +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGL--CLEGRVLEAAALV---NKMVGKGL 257
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGM--TH--PIAVAWNAMISGYVRHGLYEEA 267
D ++ T++ G + D SA LL M TH P V ++A+I + G + +A
Sbjct: 258 --HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
F +M GI + +TY +I + G ++ ++L ++ + P +L+ NA
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD---VLTF-NA 371
Query: 328 LITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERN 383
LI+ K GKL +A ++ D+M R D V++N+++ G+ R ++AK +F + +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQM 410
++T+ +I + +E ++L ++
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREI 458
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 8/189 (4%)
Query: 227 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
Y + DL +A L + + WNAMISGYV+ GL +E + M I D+YT+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
S+ A G++ HA +++ ++ + + V++AL+ Y KC VFD
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSN----IIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEE 402
++ R++++W +++SGY ++ E F ++ E N +T+ V+++ G ++
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 403 SLKLFNQMK 411
+ F MK
Sbjct: 329 GWEHFYSMK 337
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 58/347 (16%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
+ + LL Y+ +G+++ A LF + + +RD I +NAM+ Y + ++ M+
Sbjct: 144 YLKVKLLILYALSGDLQTAGILFRS--LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMR 201
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
++ PD ++F++V A S + E H ++ H ++K + V + L+ Y C+S
Sbjct: 202 QNRIVPDQYTFASVFRACSALDRLE-HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS- 259
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
+ ++FD+ LS ++ +WT++I+GY
Sbjct: 260 --------FSDGHRVFDQ--LSTRNVITWTSLISGY------------------------ 285
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
GY HG E F KM G + + T+ +++A + GL + G + H Y ++
Sbjct: 286 -----GY--HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMK 337
Query: 312 T--VVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG---YI 364
++P +H+ A++ + G+L +A E K P ++ W ++L +
Sbjct: 338 RDYGIEPEGQHYA-----AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 365 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
N + LE A F E+ N + V +G A G E + K+ +M+
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME 439
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 276 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
S G+Q++ TY L+ + G+++HA + +E+ + L+ Y
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVK----LLILYALS 156
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
G L A +F + +RDL+ WNA++SGY+ +E FI+ ++ + ++
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 171/406 (42%), Gaps = 65/406 (16%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIP----YAHHLFDKTPNPDIFSRTTLL 78
LA ++ I +G + N +++ CK + + + +K PDI + TL+
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 79 SAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
SAYS+ G ++ A +L NA P +YN ++ + A ++F M R G +
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 196
PD ++ SL+ E C +VE+
Sbjct: 338 PDSTTYR------SLLME--------------------------------ACKKGDVVET 359
Query: 197 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWN 252
+ + R D P D +++M++ + R+ +L A + + P V +
Sbjct: 360 EKVFSDMRSR-DVVP----DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 312
+I GY R G+ A + +M G MD TY +++ + +L +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 313 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARR 368
+ P + + L++ LI + K G L A E+F KM + D+V++N +L G+
Sbjct: 475 ALFP-DSYTLTI---LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 369 LEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
++ AK I+ ++ + +L +++++++ L G E+ +++++M
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTL 77
++A + +L G + + N ++ CK + A LF++ PD ++ T L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 78 LSAYSAAGNVKLAEKLFNATPVT-LR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGF 135
+ + GN++ A +LF +R D ++YN ++ + D A +++ M
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 136 APDPFSFSTVLGAM---SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
P P S+S ++ A+ +AE ++ +K VM + N+++ Y C S
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM----ICNSMIKGY--CRSGN 600
Query: 193 LVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARKLLDGMTH---- 245
AS + F E +S+ P S+ T+I G+VR ++++ A L+ M
Sbjct: 601 --------ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 246 --PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 303
P +N+++ G+ R +EA RKM G+ D TYT +I+ +
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 304 QLHAYVLRTVVQPSEHF 320
++H +L+ P + F
Sbjct: 713 RIHDEMLQRGFSPDDKF 729
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 182/424 (42%), Gaps = 55/424 (12%)
Query: 24 ARAIHAHILTTGF-------------RLTPLI--RNRLIDIYCKSSNIPYAHHLFDKTPN 68
A A+ +++ TGF LTP++ N LI+ C + A L +K
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVG 254
Query: 69 P----DIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNLDGH- 121
D+ + T+++ G+ K A L + T D + Y+A++ DGH
Sbjct: 255 KGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK--DGHH 312
Query: 122 -AAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVL- 178
A LF M G AP+ F+++ ++ W Q+L D+++ + P VL
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR--WSDAQRLLRDMIEREIN--PDVLT 368
Query: 179 -NTLLSCYICCASSTLVESPVLMASARKLFDEA--PLSQKDEPSWTTMIAGYVRNDDLAS 235
N L+S +++ E + A KL DE D ++ +MI G+ +++
Sbjct: 369 FNALIS-------ASVKEGKLF--EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A+ + D M P V +N +I Y R +E R++ G+ + TY +LI
Sbjct: 420 AKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR---- 351
N + L ++ V P N L+ + + KL +A E+F+ + +
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPD----TITCNILLYGFCENEKLEEALELFEVIQMSKIDL 535
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLF 407
D V++N I+ G +++EA +F +P E ++ T+ VMISG ++ LF
Sbjct: 536 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 595
Query: 408 NQMK 411
++MK
Sbjct: 596 HKMK 599
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 33/327 (10%)
Query: 106 SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL-------------- 151
S+N ++K + ++ F ++ + GF PD +F+T+L + L
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 152 IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAP 211
+ L +V+ G+ V NTL++ C ++E+ L+ K+ +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGL--CLEGRVLEAAALV---NKMVGKGL 257
Query: 212 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGM--TH--PIAVAWNAMISGYVRHGLYEEA 267
D ++ T++ G + D SA LL M TH P V ++A+I + G + +A
Sbjct: 258 --HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
F +M GI + +TY +I + G ++ ++L ++ + P +L+ NA
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD---VLTF-NA 371
Query: 328 LITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERN 383
LI+ K GKL +A ++ D+M R D V++N+++ G+ R ++AK +F + +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQM 410
++T+ +I + +E ++L ++
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREI 458
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 83/376 (22%)
Query: 23 LARAIHAHILTTGFRLTPL-IRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
L + IHAH+ G+ + + + N L+++Y K + + +FD+
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR---------------- 158
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
++ R+ +S+N+++ + A++ F M + P F+
Sbjct: 159 -----------------ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 142 FSTVLGAMSLIAEEE--WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVL 199
+V+ A S + E +Q+H ++ G LN+ +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE------LNSFII---------------- 239
Query: 200 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 259
T++A Y + LAS++ LL V WN ++S
Sbjct: 240 ---------------------NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
++ EA + R+M G++ DE+T +S++ A + + G++LHAY L+
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 379
F V +AL+ Y C +++ R VFD M R + WNA+++GY +EA +F +
Sbjct: 339 F---VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Query: 380 PER-NLLTWTVMISGL 394
E LL + ++G+
Sbjct: 396 EESAGLLANSTTMAGV 411
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 162/411 (39%), Gaps = 109/411 (26%)
Query: 24 ARAIHAHILTTG-FRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYS 82
+ +HA+ L G + + L+D+YC + +FD +F R L
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD-----GMFDRKIGL---- 371
Query: 83 AAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD-GFAPDPFS 141
+NAM+ YS N A+ LF+ M+ G + +
Sbjct: 372 ------------------------WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 142 FSTVL------GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 195
+ V+ GA S + +H VVK G+ V NTL+ Y S L +
Sbjct: 408 MAGVVPACVRSGAFS-------RKEAIHGFVVKRGLDRDRFVQNTLMDMY-----SRLGK 455
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMI 255
+ M I G + + DL V WN MI
Sbjct: 456 IDIAMR----------------------IFGKMEDRDL---------------VTWNTMI 478
Query: 256 SGYVRHGLYEEAFDTFRKMHSM-----------GIQMDEYTYTSLISASFNTGLFNCGRQ 304
+GYV +E+A KM ++ ++ + T +++ + G++
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 305 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 364
+HAY ++ + ++V +AL+ Y KCG L +R+VFD++P +++++WN I+ Y
Sbjct: 539 IHAYAIKNNLATD----VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 365 NARRLEEAKFIFR----EVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+EA + R + + N +T+ + + + SG +E L++F MK
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
W ++ VR L EA T+ M +GI+ D Y + +L+ A + G+Q+HA+V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
+ ++V N L+ Y KCG +VFD++ R+ VSWN+++S + + E
Sbjct: 125 KFGYGVDS---VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE 181
Query: 371 EAKFIFREVPERNL 384
A FR + + N+
Sbjct: 182 MALEAFRCMLDENV 195
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 75/312 (24%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D F + TL+ YS G + +A ++F + RD +++N M+ Y + A+ L +
Sbjct: 439 DRFVQNTLMDMYSRLGKIDIAMRIFG--KMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 130 MK-----------RDGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
M+ R P+ + T+L A+S +A+ +++H +K +
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG----KEIHAYAIKNNLATDV 552
Query: 176 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 235
+V + L+ Y C + +RK+FD+ P QK+
Sbjct: 553 AVGSALVDMYAKCGC---------LQMSRKVFDQIP--QKN------------------- 582
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
+ WN +I Y HG +EA D R M G++ +E T+ S+ +A +
Sbjct: 583 ------------VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 296 TGLFNCGRQLHAYVLRT--VVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 352
+G+ + G ++ YV++ V+P S+H+ ++ + G++ +A ++ + MP RD
Sbjct: 631 SGMVDEGLRIF-YVMKPDYGVEPSSDHYA-----CVVDLLGRAGRIKEAYQLMNMMP-RD 683
Query: 353 L---VSWNAILS 361
+W+++L
Sbjct: 684 FNKAGAWSSLLG 695
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 169/419 (40%), Gaps = 76/419 (18%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAA 84
+ I AH+L +GF + ++L+D K +I YA +FD I + +L++
Sbjct: 85 KTIQAHMLKSGFP-AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKH 143
Query: 85 GNVKLAEKLFN--ATPVTLRDTISYNAMVKAYS-----------HNLD------------ 119
K A +++ T L D + +++ KA+S H L
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 203
Query: 120 GHAAVKLFVRMKRDGFAP---DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS 176
G A V ++V+ + A D V+ +LI + V + M V
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEA-VKAFQSMLVEK 262
Query: 177 VL---NTLLSCYICCASSTLVESPVLMAS--ARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
V T S I C + + + L+ + F+ A SQ T+++ Y+R
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ------TSLLTMYLRCS 316
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
+ + ++ + +P V+W ++ISG V++G E A FRKM I+ + +T +S +
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 351
N +F GRQ+H V + ++ + LI Y KCG AR VFD +
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKY----AGSGLIDLYGKCGCSDMARLVFDTLSEV 432
Query: 352 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
D++S N ++ Y A++GFG E+L LF +M
Sbjct: 433 DVISLNTMIYSY-------------------------------AQNGFGREALDLFERM 460
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 135/310 (43%), Gaps = 51/310 (16%)
Query: 73 SRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKR 132
S+T+LL+ Y V + ++F + + +S+ +++ N A+ F +M R
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKC--IEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 133 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 192
D P+ F+ S+ L S +A E +Q+H V K+G
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFE-EGRQIHGIVTKYG---------------------- 398
Query: 193 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 252
FD +D+ + + +I Y + AR + D ++ ++ N
Sbjct: 399 --------------FD------RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 253 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLR 311
MI Y ++G EA D F +M ++G+Q ++ T S++ A N+ L G +L ++
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++ ++H+ ++ + G+L +A + ++ DLV W +LS R++E
Sbjct: 499 KIMLTNDHYA-----CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEM 553
Query: 372 AKFIFREVPE 381
A+ I R++ E
Sbjct: 554 AERITRKILE 563
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 46/413 (11%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYA----HHLFDKTPNPDIFSRTTLLS 79
A A ++ T + L+ YC I A H + K P I++ TTLLS
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 80 AYSAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
AG ++ A KLFN A + ++YN M++ Y D A + M G P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 138 DPFSFSTVLGAMSLI---AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
D +S+ ++ + L +E + LH + +C +L+ C L
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGF------CREGKLE 629
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM--------THP 246
E+ ++ +++ D + +I G +++ D RKL G+ P
Sbjct: 630 EA---LSVCQEMVQRG--VDLDLVCYGVLIDGSLKHKD----RKLFFGLLKEMHDRGLKP 680
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V + +MI + G ++EAF + M + G +E TYT++I+ G N
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN-----E 735
Query: 307 AYVLRTVVQPSEHFILSVN-NALITFYTK----CGKLVQAREVFDKMPVRDLVSWNAILS 361
A VL + +QP V + TK K V+ K + + ++N ++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 362 GYINARRLEEA-KFIFREVPER---NLLTWTVMISGLAESGFGEESLKLFNQM 410
G+ R+EEA + I R + + + +T+T MI+ L +++++L+N M
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 170/407 (41%), Gaps = 34/407 (8%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYA----HHLFDKTPNPDIFSRTTLLS 79
A+ + AH+ TG + + N LID CK + A L K PD+ + TL+
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 80 AYSAAGNVKLAEKLFNATPVTLR---DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFA 136
++ ++ + + LR + +++V+ A+ L R+ G +
Sbjct: 306 GLCKVQEFEIGLEMMDEM-LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 137 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVV-KWGVMCVPSVLNTLLSCYICCASSTLVE 195
P+ F ++ ++ SL ++H +L D + K G+ + L+ + C L
Sbjct: 365 PNLFVYNALID--SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF--CRRGKLDT 420
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAW 251
+ + + L P + ++I G+ + D+++A + M + P V +
Sbjct: 421 ALSFLGE----MVDTGLKLSVYP-YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
+++ GY G +A + +M GI YT+T+L+S F GL +L +
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQA----REVFDKMPVRDLVSWNAILSGYINAR 367
V+P+ N +I Y + G + +A +E+ +K V D S+ ++ G
Sbjct: 536 WNVKPNR----VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 368 RLEEAKF----IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ EAK + + E N + +T ++ G G EE+L + +M
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 154/356 (43%), Gaps = 26/356 (7%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFN-ATPVTLR-DTISYNAMVKAYSHNLDGHAAVKL 126
P++ + + LL + LA +LFN V +R D Y ++++ D A ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
M+ G + ++ ++ + ++ W + D+ G P V+ Y
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCK-KQKVWEAVGIKKDLA--GKDLKPDVVTYCTLVYG 306
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA----RKLLDG 242
C E + M +P E + ++++ G + + A ++++D
Sbjct: 307 LCKVQEF-EIGLEMMDEMLCLRFSP----SEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 243 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 302
P +NA+I + + EA F +M +G++ ++ TY+ LI G +
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 303 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR----EVFDKMPVRDLVSWNA 358
++ T ++ S + N+LI + K G + A E+ +K +V++ +
Sbjct: 422 LSFLGEMVDTGLKLSVY----PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 359 ILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ GY + ++ +A ++ E+ + ++ T+T ++SGL +G +++KLFN+M
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 129/315 (40%), Gaps = 52/315 (16%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAPDPFSFSTVLGAMSLIAEEEWHCQ 160
R+ S+N ++ +S + ++ LF+RM R+ PD F+ +L A S + E
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS-ASREAKSGD 154
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
+H +K G +SS V S +++
Sbjct: 155 LIHVLCLKLGF-----------------SSSLFVSSALVIM------------------- 178
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
YV L ARKL D M +V + AM GYV+ G FR+M G
Sbjct: 179 ------YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 340
+D SL+ A G G+ +H + +R L++ NA+ Y KC L
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC----SCLGLNLGNAITDMYVKCSILDY 288
Query: 341 AREVFDKMPVRDLVSWNAILSGY-INARRLEEAKF---IFREVPERNLLTWTVMISGLAE 396
A VF M RD++SW++++ GY ++ + K + +E E N +T+ ++S A
Sbjct: 289 AHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 348
Query: 397 SGFGEESLKLFNQMK 411
G E+S F M+
Sbjct: 349 GGLVEKSWLYFRLMQ 363
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 141/320 (44%), Gaps = 26/320 (8%)
Query: 71 IFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
+F + L+ Y G + A KLF+ PV RD++ Y AM Y + + +F M
Sbjct: 169 LFVSSALVIMYVDMGKLLHARKLFDDMPV--RDSVLYTAMFGGYVQQGEAMLGLAMFREM 226
Query: 131 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 190
GFA D ++L A + + H + +H ++ ++ N + Y+ C+
Sbjct: 227 GYSGFALDSVVMVSLLMACGQLGALK-HGKSVHGWCIRRCSCLGLNLGNAITDMYVKCS- 284
Query: 191 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THP 246
++ A +F +S++D SW+++I GY + D+ + KL D M P
Sbjct: 285 --------ILDYAHTVF--VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEP 334
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
AV + ++S GL E+++ FR M I + Y S+ GL +
Sbjct: 335 NAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLE---EAE 391
Query: 307 AYVLRTVVQPSEHFILSVNNALITF-YTKCGKLVQAREVFDKMPVRDLVSWNAILSG-YI 364
++ V+P E + +V + + + G+ V ARE+ P + S+ L+G Y
Sbjct: 392 KFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERV-ARELIQLKPRK--ASYYVTLAGLYS 448
Query: 365 NARRLEEAKFIFREVPERNL 384
A R +EA+ + + + E+ +
Sbjct: 449 AAGRFDEAESLRQWMKEKQI 468
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 163/377 (43%), Gaps = 34/377 (9%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL--RDTISYNAM 110
S + + + P++ + +++ G++ LA L N D + +N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 111 VKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKW 169
+ + A+ LF M+ G P+ ++S+++ L + W QL D+++
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQLLSDMIEK 249
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAG 226
+ N L+ ++ VE A KL D+ + + +P ++ ++I G
Sbjct: 250 KINPNLVTFNALIDAFV--KEGKFVE-------AEKLHDDM-IKRSIDPDIFTYNSLING 299
Query: 227 YVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+ +D L A+++ + M P +N +I G+ + E+ + FR+M G+ D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
TYT+LI F+ G + +++ ++ V P + + L+ GKL +A
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD----IMTYSILLDGLCNNGKLEKAL 415
Query: 343 EVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGL 394
EVFD M D+ + ++ G A ++++ +F + + N++T+ MISGL
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 395 AESGFGEESLKLFNQMK 411
+E+ L +MK
Sbjct: 476 CSKRLLQEAYALLKKMK 492
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 112/266 (42%), Gaps = 22/266 (8%)
Query: 44 NRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--AT 97
N LID + K A L D ++ +PDIF+ +L++ + + A+++F +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 98 PVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
D +YN ++K + + +LF M G D +++T++ + + +
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD- 377
Query: 158 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ--K 215
+ Q++ +V GV P ++ + C + L A ++FD S+
Sbjct: 378 NAQKVFKQMVSDGV--PPDIMTYSILLDGLCNNGKL-------EKALEVFDYMQKSEIKL 428
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTF 271
D +TTMI G + + L ++ P V +N MISG L +EA+
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTG 297
+KM G D TY +LI A G
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDG 514
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 54/302 (17%)
Query: 63 FDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHA 122
++ P+ +++ + +GN+ A + F+ V RD ++YN ++ S
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSV--RDVVTYNLLISGNSRYGCSLR 95
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ---QLHCDVVKWGVMCVPSVLN 179
A++L+ M G +F +VL + +E C+ Q+HC V+ G C V +
Sbjct: 96 AIELYAEMVSCGLRESASTFPSVLS----VCSDELFCREGIQVHCRVISLGFGCNMFVRS 151
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
L+ Y C L+ A KLFDE +
Sbjct: 152 ALVGLYACLR---------LVDVALKLFDE-----------------------------M 173
Query: 240 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 299
LD +AV N ++ + + G + F+ + +M G+ + TY +I + L
Sbjct: 174 LD---RNLAVC-NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 300 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 359
G+QLH+ V+++ S F V N L+ +Y+ CG L + F+ +P +D++SWN+I
Sbjct: 230 YEGKQLHSLVVKSGWNISNIF---VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSI 286
Query: 360 LS 361
+S
Sbjct: 287 VS 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 153/352 (43%), Gaps = 62/352 (17%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKA---YSHNLDGHAAVKL 126
+IF L+ YSA G++ + + FNA P +D IS+N++V Y LD ++ L
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPE--KDVISWNSIVSVCADYGSVLD---SLDL 302
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
F +M+ G P F + L S ++ + +Q+HC V+K G
Sbjct: 303 FSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG-KQIHCYVLKMG---------------- 345
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
FD + L + + +I Y + + + ++ L +
Sbjct: 346 --------------------FDVSSLHVQ-----SALIDMYGKCNGIENSALLYQSLPCL 380
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA---SFNTGLFNCGR 303
N++++ + G+ ++ + F M G +DE T ++++ A S L +C
Sbjct: 381 NLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSC-T 439
Query: 304 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 363
+H +++ ++V+ +LI YTK G+ +R+VFD++ ++ +I++GY
Sbjct: 440 LVHCCAIKSGYAAD----VAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGY 495
Query: 364 INARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMK 411
+ + RE+ NL+ T ++SG + SG EE +F+ ++
Sbjct: 496 ARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLE 547
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
+++ +L SA + D M+ V +N +ISG R+G A + + +M S G++ T+
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ-AREVFD 346
S++S + G Q+H V+ + + V +AL+ Y C +LV A ++FD
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCN----MFVRSALVGLYA-CLRLVDVALKLFD 171
Query: 347 KMPVRDLVSWNAILSGYIN---ARRLEEAKFIFR-EVPERNLLTWTVMISGLA 395
+M R+L N +L + ++RL E E +N LT+ MI G +
Sbjct: 172 EMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS 224
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 154/363 (42%), Gaps = 59/363 (16%)
Query: 6 MANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIY--CKSSNIPYAHHLF 63
M L PS ++ + +A HA I G+ P + + Y C S + L+
Sbjct: 32 MLKQVLESCKAPSNSKCVLQA-HAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLW 90
Query: 64 DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF-NATPVTLRDTISYNAMVKAYSHNLDGHA 122
+ +P + + ++ + G LA+K+ NA+ ++ I++N M+ Y N+
Sbjct: 91 FLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASD---QNVITWNLMIGGYVRNVQYEE 147
Query: 123 AVKLFVRM-KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 181
A+K M P+ FSF++ L A + + + H + +H ++ G+ LN +
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLH-HAKWVHSLMIDSGIE-----LNAI 201
Query: 182 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 241
LS + ++ Y + D+ ++R++
Sbjct: 202 LS-------------------------------------SALVDVYAKCGDIGTSREVFY 224
Query: 242 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 301
+ WNAMI+G+ HGL EA F +M + + D T+ L++ + GL
Sbjct: 225 SVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEE 284
Query: 302 GRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNA 358
G++ + R +QP EH+ A++ + G++ +A E+ + MP+ D+V W +
Sbjct: 285 GKEYFGLMSRRFSIQPKLEHY-----GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 359 ILS 361
+LS
Sbjct: 340 LLS 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 18/255 (7%)
Query: 161 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 220
Q H + K G PS+L + ++ Y C S L AR+L +
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYL---------ARRLLLWFLSLSPGVCNI 101
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GI 279
+I ++ + A+K+L + + WN MI GYVR+ YEEA + M S I
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 280 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
+ +++++ S ++A G + + +H+ ++ + ++ + ILS +AL+ Y KCG +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNA--ILS--SALVDVYAKCGDIG 217
Query: 340 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLA 395
+REVF + D+ WNA+++G+ EA +F E+ ++ +T+ +++ +
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 396 ESGFGEESLKLFNQM 410
G EE + F M
Sbjct: 278 HCGLLEEGKEYFGLM 292
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 173/396 (43%), Gaps = 50/396 (12%)
Query: 46 LIDIYCKSSNIPYAHHLF----DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNAT---P 98
LI+ +CK + A LF + PD+ + +TL+ Y AG + + KLF+
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
V L D + +++ + Y + D A ++ RM G +P+ +++ ++ + +
Sbjct: 352 VKL-DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI-YE 409
Query: 159 CQQLHCDVVKWG----VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
++ ++K G ++ S+++ C + L E + M
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP----------- 458
Query: 215 KDEPSWTTMIAGYVRNDDLASAR----KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
D + ++ G + + A K+L V +N++I G+ R ++EA
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLF------NCGRQLHAYVLRTVVQPSEHFILSV 324
FR M GI+ D T+T+++ S F G QL + R + ++V
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD----IAV 574
Query: 325 NNALITFYTKCGKLVQAREVFDKM------PVRDLVSWNAILSGYINARRLEEAKFIFRE 378
N +I KC ++ A + F+ + P D+V++N ++ GY + RRL+EA+ IF
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEP--DIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 379 VPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
+ N +T T++I L ++ + ++++F+ M
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+LD P V + +I+G+ + G + AFD F+ M GI+ D Y++LI F G+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLV 354
G +L + L V+ + V ++ I Y K G L A V+ +M + ++V
Sbjct: 337 LGMGHKLFSQALHKGVKLD----VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 355 SWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ ++ G R+ EA ++ ++ +R +++T++ +I G + G L+ M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 169/418 (40%), Gaps = 57/418 (13%)
Query: 7 ANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKT 66
N++L +L+ A + G N +I C+ I AHHL
Sbjct: 213 CNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL--- 269
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
L +L TP D ISY+ +V Y + KL
Sbjct: 270 ----------------------LLMELKGYTP----DVISYSTVVNGYCRFGELDKVWKL 303
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
MKR G P+ + + +++G + I + ++ ++++ G++ V TL+ +
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLA-EAEEAFSEMIRQGILPDTVVYTTLIDGF- 361
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQ--KDEPSWTTMIAGYVRNDDLASARKLLDGM- 243
C + +A K F E D ++T +I+G+ + D+ A KL M
Sbjct: 362 -CKRGDI-------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 244 ---THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
P +V + +I+GY + G ++AF M G + TYT+LI G +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSW 356
+L + + +QP+ + N+++ K G + +A ++ + D V++
Sbjct: 474 SANELLHEMWKIGLQPN----IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 357 NAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
++ Y + +++A+ I +E+ + L +T+ V+++G G E+ KL N M
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 177/404 (43%), Gaps = 61/404 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF----DKTPNPDIFSRTTLLS 79
A + ++ G ++ LID +CK +I A F + PD+ + T ++S
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 80 AYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ G++ A KLF+ D++++ ++ Y A ++ M + G +P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVE 195
+ +++T++ + + + + LH W + P++ N++++ C S + E
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLH---EMWKIGLQPNIFTYNSIVNGL--CKSGNIEE 509
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAW 251
+ L+ F+ A L+ D ++TT++ Y ++ ++ A+++L M P V +
Sbjct: 510 AVKLVGE----FEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N +++G+ HG+ E+ M + GI + T+ SL+ Y +R
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK---------------QYCIR 609
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++ A + C + V D ++ ++ G+ AR ++E
Sbjct: 610 N----------NLKAATAIYKDMCSRGVGP----------DGKTYENLVKGHCKARNMKE 649
Query: 372 AKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
A F+F+E+ + ++ T++V+I G + E+ ++F+QM+
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 169/418 (40%), Gaps = 57/418 (13%)
Query: 7 ANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKT 66
N++L +L+ A + G N +I C+ I AHHL
Sbjct: 213 CNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL--- 269
Query: 67 PNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKL 126
L +L TP D ISY+ +V Y + KL
Sbjct: 270 ----------------------LLMELKGYTP----DVISYSTVVNGYCRFGELDKVWKL 303
Query: 127 FVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
MKR G P+ + + +++G + I + ++ ++++ G++ V TL+ +
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLA-EAEEAFSEMIRQGILPDTVVYTTLIDGF- 361
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQ--KDEPSWTTMIAGYVRNDDLASARKLLDGM- 243
C + +A K F E D ++T +I+G+ + D+ A KL M
Sbjct: 362 -CKRGDI-------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 244 ---THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 300
P +V + +I+GY + G ++AF M G + TYT+LI G +
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 301 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSW 356
+L + + +QP+ + N+++ K G + +A ++ + D V++
Sbjct: 474 SANELLHEMWKIGLQPN----IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 357 NAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
++ Y + +++A+ I +E+ + L +T+ V+++G G E+ KL N M
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 177/404 (43%), Gaps = 61/404 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF----DKTPNPDIFSRTTLLS 79
A + ++ G ++ LID +CK +I A F + PD+ + T ++S
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 80 AYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ G++ A KLF+ D++++ ++ Y A ++ M + G +P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVE 195
+ +++T++ + + + + LH W + P++ N++++ C S + E
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLH---EMWKIGLQPNIFTYNSIVNGL--CKSGNIEE 509
Query: 196 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAW 251
+ L+ F+ A L+ D ++TT++ Y ++ ++ A+++L M P V +
Sbjct: 510 AVKLVGE----FEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 311
N +++G+ HG+ E+ M + GI + T+ SL+ Y +R
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK---------------QYCIR 609
Query: 312 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 371
++ A + C + V D ++ ++ G+ AR ++E
Sbjct: 610 N----------NLKAATAIYKDMCSRGVGP----------DGKTYENLVKGHCKARNMKE 649
Query: 372 AKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
A F+F+E+ + ++ T++V+I G + E+ ++F+QM+
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
TT++ Y +N DL SA KL D M +WNA+I+G V EA + +++M + GI+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 281 MDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 339
E T + + A + G G + H Y V+ V+NA I Y+KCG +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI---------VSNAAIDMYSKCGFVD 258
Query: 340 QAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGL 394
+A +VF++ + +V+WN +++G+ A IF ++ + + +++ ++
Sbjct: 259 KAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTAC 318
Query: 395 AESGFGEESLKLFNQM 410
+G E L +FN M
Sbjct: 319 RHAGLVEYGLSVFNNM 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
DL+ A ++ + P+ WNA+I G+ AF +R M ++
Sbjct: 52 DLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT----FYTKCGKLVQAREVFDK 347
SF L C R L + + + LS ++ L T Y+K G L+ A ++FD+
Sbjct: 112 CSFT--LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFR----EVPERNLLTWTVMISGLAESGFGEES 403
MPVRD+ SWNA+++G ++ R EA +++ E R+ +T + + G +E
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 404 LKLFN 408
+F+
Sbjct: 230 ENIFH 234
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 124/309 (40%), Gaps = 55/309 (17%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
TTLL AYS G++ A KLF+ PV RD S+NA++ A++L+ RM+ +G
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPV--RDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
+ LGA S H VK G N + + A+ +
Sbjct: 206 IRRSEVTVVAALGACS------------HLGDVKEGENIFHGYSND--NVIVSNAAIDMY 251
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 254
+ A ++F++ +K +W TM
Sbjct: 252 SKCGFVDKAYQVFEQFT-GKKSVVTWNTM------------------------------- 279
Query: 255 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTV 313
I+G+ HG A + F K+ GI+ D+ +Y + ++A + GL G + + + V
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEA 372
+ +H+ ++ ++ G+L +A ++ M + D V W ++L +E A
Sbjct: 340 ERNMKHY-----GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMA 394
Query: 373 KFIFREVPE 381
+ RE+ E
Sbjct: 395 EIASREIKE 403
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 45/332 (13%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D+ + ++ AY+ AV+ F RMK PD F+++ +L M + EE +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM--MREEVF----- 178
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM---------ASARKLFDEAPLS 213
M +V N +L C S L +LM + A+K+FD+
Sbjct: 179 --------FMLAFAVYNEMLKCN---CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR 227
Query: 214 --QKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEA 267
+ ++T +I+G + ARKL M +P +VA NA++ G+ + G EA
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 268 FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 327
F+ R G + Y+SLI F + +L+A +L+ ++P + +
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD----IILYTI 343
Query: 328 LITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER- 382
LI +K GK+ A ++ MP + D +NA++ LEE + + E+ E
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 383 ---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ T T++I + +G E+ ++F +++
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIE 435
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 159/375 (42%), Gaps = 45/375 (12%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHNL 118
++ K PDI T L+ S AG ++ A KL ++ P DT YNA++KA
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM---SLIAEEEWHCQQLHCDVVKWGVMCVP 175
L + M PD + + ++ +M L+ E E ++ ++ K G C P
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE----EIFTEIEKSG--CSP 441
Query: 176 SV--LNTLLSCYICCASSTLVESPVL---MASARKLFDEAPLSQKDEPSWTTMI-AGYVR 229
SV N L+ C S L E+ +L M R LS S+ TM+ +G +
Sbjct: 442 SVATFNALIDGL--CKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI- 498
Query: 230 NDDLASARKLL---DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 286
L + R L D + P V++N +I+G+ R G + A + G+ D TY
Sbjct: 499 ---LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA----R 342
+LI+ GL GR+ A+ L H +V +L+T+ + K++ A
Sbjct: 556 NTLIN-----GLHRVGREEEAFKLFYAKDDFRHSP-AVYRSLMTWSCRKRKVLVAFNLWM 609
Query: 343 EVFDKMPVRDLVSWNAILSGYINA------RRLEEAKFIFREVPERNLLTWTVMISGLAE 396
+ K+ D + N I + RRL E + E L +T+ + GL +
Sbjct: 610 KYLKKISCLDDETANEIEQCFKEGETERALRRLIE---LDTRKDELTLGPYTIWLIGLCQ 666
Query: 397 SGFGEESLKLFNQMK 411
SG E+L +F+ ++
Sbjct: 667 SGRFHEALMVFSVLR 681
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 52/312 (16%)
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
T +N M++ Y + + A+ + M + G PD F++ +L A + + +Q+H
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR-EGKQIH 155
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTM 223
V K G+ V N+L++ Y C
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEM-------------------------------- 183
Query: 224 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQMD 282
+L+SA + + + A +W++M+S G++ E FR M S ++ +
Sbjct: 184 --------ELSSA--VFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
E S + A NTG N G +H ++LR + SE I+ V +L+ Y KCG L +A
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNI---SELNII-VQTSLVDMYVKCGCLDKAL 289
Query: 343 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGLAESG 398
+F KM R+ ++++A++SG E A +F +E E + + + +++ + SG
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSG 349
Query: 399 FGEESLKLFNQM 410
+E ++F +M
Sbjct: 350 LVKEGRRVFAEM 361
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 4/142 (2%)
Query: 236 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
A + G+ P +N MI GYV +EEA + +M G + D +TY L+ A
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 355
G+Q+H V + ++ + V N+LI Y +CG++ + VF+K+ + S
Sbjct: 145 LKSIREGKQIHGQVFKLGLEAD----VFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 356 WNAILSGYINARRLEEAKFIFR 377
W++++S E +FR
Sbjct: 201 WSSMVSARAGMGMWSECLLLFR 222
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T+++ YV+ L A + M + ++AMISG HG E A F KM G++
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 281 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKL 338
D Y S+++A ++GL GR++ A +L+ V+P+ EH+ L+ + G L
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHY-----GCLVDLLGRAGLL 387
Query: 339 VQAREVFDKMPV-RDLVSWNAILS 361
+A E +P+ ++ V W LS
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLS 411
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 169/403 (41%), Gaps = 65/403 (16%)
Query: 60 HHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKAYSHN 117
+ D ++S T ++ G V+ ++KL V + +YN ++ AY
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 118 LDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSV 177
D + MK+DG + ++ T+L +S+ + ++L ++ + G+ V
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTY-TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT--TMIAGYVRNDDLAS 235
+L+S + C + M A LFDE S+T +I G + ++ +
Sbjct: 332 YTSLIS-WNCRKGN--------MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 236 ARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT------ 285
A L++ M + V +N +I GY R G+ +EA + M G Q D +T
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 286 -----------------------------YTSLISASFNTGLFNCGRQLHAYVLRTVVQP 316
YT+LI G ++L + VQP
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 317 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEA 372
+ N +I Y K GK+ +AR++ M D ++ +++ G A ++EA
Sbjct: 503 NA----ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 373 KFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
+F E+ ++N +T+TVMISGL+++G +E+ L+++MK
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 175/428 (40%), Gaps = 79/428 (18%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFN---- 95
N +I+ +C+ +A+ + K PD + TL+ G V A L +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186
Query: 96 --ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL------- 146
P D ++YN++V + D A+ L +M+ D F++ST++
Sbjct: 187 NGCQP----DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 147 ---GAMSLIAEEEWHCQQLH-----------CDVVKW--GVM---------CVPSVL--N 179
A+SL E E + C KW G + VP+V+ N
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASA 236
LL ++ + A +L+ E +++ P ++ T++ GY + L+ A
Sbjct: 303 VLLDVFV---------KEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 237 RKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 292
+LD M P V + ++I GY ++ FR + G+ + TY+ L+
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 293 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD-----K 347
+G +L ++ V P + L+ GKL +A E+F+ K
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPD----VMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 348 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEES 403
M + +V + I+ G ++E+A +F +P + N++T+TVMISGL + G E+
Sbjct: 469 MDL-GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 404 LKLFNQMK 411
L +M+
Sbjct: 528 NILLRKME 535
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 67/339 (19%)
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW---HCQQLHCDVVKWGVMCVPSVLN 179
A+ LF M R P FS A++ + C+QL + + + LN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY----TLN 127
Query: 180 TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL 239
+++C+ C + S ++ KL E D ++ T+I G ++ A L
Sbjct: 128 IMINCFCRCCKTCFAYS--VLGKVMKLGYEP-----DTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 240 LDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA--- 292
+D M P V +N++++G R G A D RKM ++ D +TY+++I +
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 293 ------------------------SFNT---GLFNCGR------QLHAYVLRTVVQPSEH 319
++N+ GL G+ L V R +V
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAK-- 373
F N L+ + K GKL +A E++ +M R +++++N ++ GY RL EA
Sbjct: 301 F-----NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 374 --FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ R +++T+T +I G ++ +K+F +
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 109/286 (38%), Gaps = 57/286 (19%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
A ++ ++T G + N L+D YC + + A+++ D +PDI + T+L+
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 80 AYSAAGNVKLAEKLF-NATPVTL-RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
Y V K+F N + L + ++Y+ +V+ + + A +LF M G P
Sbjct: 377 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D ++ +L + CD K
Sbjct: 437 DVMTYGILLDGL--------------CDNGK----------------------------- 453
Query: 198 VLMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGM----THPIAVAW 251
+ A ++F++ S+ D +TT+I G + + A L + P + +
Sbjct: 454 --LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
MISG + G EA RKM G ++ TY +LI A G
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 174/397 (43%), Gaps = 56/397 (14%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV-- 99
LI+ C + A L D+ PD + +L+ +GN LA LF
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
+ Y+ ++ + + A+ LF M+ G D ++S+++G L + +W
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG--LCNDGKWD- 297
Query: 160 QQLHCDVVKW-----GVMCVPSVL--NTLLSCYICCASSTLVESPVLMASARKLFDE--- 209
D K G +P V+ + L+ ++ L+E A++L++E
Sbjct: 298 -----DGAKMLREMIGRNIIPDVVTFSALIDVFV--KEGKLLE-------AKELYNEMIT 343
Query: 210 ---APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHG 262
AP D ++ ++I G+ + + L A ++ D M P V ++ +I+ Y +
Sbjct: 344 RGIAP----DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
++ FR++ S G+ + TY +L+ +G N ++L ++ V PS +
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS----V 455
Query: 323 SVNNALITFYTKCGKLVQAREVFDKMPVRDLV----SWNAILSGYINARRLEEAKFIFRE 378
L+ G+L +A E+F+KM + +N I+ G NA ++++A +F
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 379 VPER----NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ ++ +++T+ VMI GL + G E+ LF +MK
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 169/401 (42%), Gaps = 42/401 (10%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDI----FSRTTLLSAYSAAGNVKLA 90
GF+ + +++ CKS N A LF K +I + ++ + G+ A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 91 EKLFNATPVT--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGA 148
LFN + D ++Y++++ ++ K+ M PD +FS ++
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 149 MSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLF 207
+ E + ++L+ +++ G+ N+L+ + C + L E A ++F
Sbjct: 325 --FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF--CKENCLHE-------ANQMF 373
Query: 208 DEAPLSQKDEP---SWTTMIAGYVR----NDDLASARKLLDGMTHPIAVAWNAMISGYVR 260
D +S+ EP +++ +I Y + +D + R++ P + +N ++ G+ +
Sbjct: 374 D-LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
G A + F++M S G+ TY L+ + G N A + +Q S
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN-----KALEIFEKMQKSRMT 487
Query: 321 I-LSVNNALITFYTKCGKLVQAREVF----DKMPVRDLVSWNAILSGYINARRLEEAKFI 375
+ + + N +I K+ A +F DK D+V++N ++ G L EA +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 376 FREVPERNL----LTWTVMISG-LAESGFGEESLKLFNQMK 411
FR++ E T+ ++I L SG S++L +MK
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGL-ISSVELIEEMK 587
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 148/326 (45%), Gaps = 40/326 (12%)
Query: 105 ISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW---HCQQ 161
+SY ++ ++ + A+ LF M + P P F+ + A++ + + C+
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
+ + ++ + + +++CY C L+ + ++ A KL E D +++
Sbjct: 96 MELNGIEHDMY----TMTIMINCY--CRKKKLLFAFSVLGRAWKLGYEP-----DTITFS 144
Query: 222 TMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 277
T++ G+ ++ A L+D M P V + +I+G G EA +M
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 278 GIQMDEYTYTSLIS---ASFNTGL-FNCGRQLHAYVLR-TVVQPSEHFILSVNNALITFY 332
G Q DE TY +++ S N+ L + R++ ++ +VVQ S +I
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS---------IVIDSL 255
Query: 333 TKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNLL--- 385
K G A +F++M ++ D+V++++++ G N + ++ + RE+ RN++
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 386 -TWTVMISGLAESGFGEESLKLFNQM 410
T++ +I + G E+ +L+N+M
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEM 341
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 119/280 (42%), Gaps = 24/280 (8%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
A+ ++ ++T G + N LID +CK + + A+ +FD K PDI + + L++
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 80 AYSAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+Y A V +LF ++ + +TI+YN +V + + +AA +LF M G P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 138 DPFSFSTVLGAMSLIAEEEWHC---QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
++ +L + E +++ + G+ +++ + C +S +
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM------CNASKVD 507
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVA 250
++ L S L D+ + D ++ MI G + L+ A RK+ + P
Sbjct: 508 DAWSLFCS---LSDKG--VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 290
+N +I ++ + + +M G D T +I
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 177/389 (45%), Gaps = 39/389 (10%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N++++ YCK N+ A+ K +PD F+ T+L+ Y ++ A K+FN P+
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 100 T--LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
R+ ++Y ++ A+ LFV+MK D P +++ ++ ++ +E +
Sbjct: 282 KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC-GSERKS 340
Query: 158 HCQQLHCDVVKWGVMCVPSVLN-TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
L ++ + G+ P++ T+L +C S AR+L + L +
Sbjct: 341 EALNLVKEMEETGIK--PNIHTYTVLIDSLC--------SQCKFEKARELLGQM-LEKGL 389
Query: 217 EP---SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFD 269
P ++ +I GY + + A +++ M P +N +I GY + +++ A
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMG 448
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
KM + D TY SLI +G F+ +L + + + P + S+ ++L
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL- 507
Query: 330 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNL- 384
K ++ +A ++FD + + ++V + A++ GY A +++EA + ++ +N
Sbjct: 508 ---CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 385 ---LTWTVMISGLAESGFGEESLKLFNQM 410
LT+ +I GL G +E+ L +M
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 140/348 (40%), Gaps = 48/348 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
AR + +L G + N LI+ YCK I A + + + +P+ + L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 80 AYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
Y + NV A + N L D ++YN+++ + + +A +L M G P
Sbjct: 437 GYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 138 DPFSFSTVLGAMSLIAEEEWHC--------QQLHCDVVKWGVM----------------- 172
D +++++++ ++ E C + ++ +VV + +
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 173 -------CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
C+P+ L + CA L E+ +L K+ + +S + T +I
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS-----TDTILIH 610
Query: 226 GYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
+++ D A +++L T P A + I Y R G +A D KM G+
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
D +TY+SLI + G N + + T +PS+H LS+ L+
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 165/377 (43%), Gaps = 34/377 (9%)
Query: 53 SSNIPYAHHLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRD--TISYNAM 110
S + + K PD+ + +++ G++ LA L + + YN +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 111 VKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKW 169
+ A + + + A+ LF M G P+ ++++++ L W +L D+++
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI--RCLCNYGRWSDASRLLSDMIER 320
Query: 170 GVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAG 226
+ + L+ ++ LVE A KL+DE + + +P +++++I G
Sbjct: 321 KINPNVVTFSALIDAFV--KEGKLVE-------AEKLYDEM-IKRSIDPDIFTYSSLING 370
Query: 227 YVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
+ +D L A+ + + M P V +N +I G+ + +E + FR+M G+ +
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
TYT+LI F + + + ++ V P + + L+ GK+ A
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD----IMTYSILLDGLCNNGKVETAL 486
Query: 343 EVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGL 394
VF+ + D+ ++N ++ G A ++E+ +F + + N++T+T M+SG
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 395 AESGFGEESLKLFNQMK 411
G EE+ LF +MK
Sbjct: 547 CRKGLKEEADALFREMK 563
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 24/265 (9%)
Query: 46 LIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGNVKLAEKLFN--ATPV 99
LID + K + A L+D ++ +PDIF+ ++L++ + + A+ +F +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 100 TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHC 159
+ ++YN ++K + ++LF M + G + +++T++ A E +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF-FQARECDNA 450
Query: 160 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP- 218
Q + +V GV+ P ++ + C + + + V+ ++ K EP
Sbjct: 451 QIVFKQMVSDGVL--PDIMTYSILLDGLCNNGKVETALVVFEYLQR--------SKMEPD 500
Query: 219 --SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFR 272
++ MI G + + L ++ P V + M+SG+ R GL EEA FR
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 273 KMHSMGIQMDEYTYTSLISASFNTG 297
+M G D TY +LI A G
Sbjct: 561 EMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 127/296 (42%), Gaps = 16/296 (5%)
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL 182
AV LF M + P FS +L A++ + + + L + G+ + L+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL-VISLGEQMQNLGISHNLYTYSILI 123
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 242
+C+ C S L + ++A KL E D + +++ G+ + ++ A L+
Sbjct: 124 NCF--CRRSQLSLALAVLAKMMKLGYEP-----DIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 243 MT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
M P + +N +I G RH EA +M G Q D TY +++ G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 358
+ L + + ++P ++ +AL + L E+ +K ++V++N+
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 359 ILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ N R +A + ++ ER N++T++ +I + G E+ KL+++M
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQM 281
++ YV+ ++ +ARKL D M P V+W ++ISGY G + A F+KMH +
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
+EYT+ S+ A G+ +HA + + ++ + + V+++L+ Y KC + A
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRN----IVVSSSLVDMYGKCNDVETA 185
Query: 342 REVFDKMP--VRDLVSWNAILSGYINARRLEEAKFIFR 377
R VFD M R++VSW ++++ Y R EA +FR
Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR 223
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 150/404 (37%), Gaps = 112/404 (27%)
Query: 10 FLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNP 69
FL S +H L GF N L+ Y K I A LFD+ P
Sbjct: 34 FLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEP 93
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
++ S T+++S Y+ G + A+ +F +
Sbjct: 94 NVVSWTSVISGYNDMGKPQ---------------------------------NALSMFQK 120
Query: 130 MKRDG-FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M D P+ ++F++V A S +AE + +H + G+ V ++L+ Y C
Sbjct: 121 MHEDRPVPPNEYTFASVFKACSALAESRIG-KNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ +AR++FD +MI GY RN
Sbjct: 180 ND---------VETARRVFD-------------SMI-GYGRN-----------------V 199
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHS--MGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
V+W +MI+ Y ++ EA + FR ++ + +++ S+ISA + G G+ H
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 307 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 366
V R + + V +L+ Y KCG L A ++F ++ ++S
Sbjct: 260 GLVTRGGYESN----TVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVIS----------- 304
Query: 367 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+T MI A+ G GE ++KLF++M
Sbjct: 305 --------------------YTSMIMAKAKHGLGEAAVKLFDEM 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 68/357 (19%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
+I ++L+ Y +V+ A ++F++ R+ +S+ +M+ AY+ N GH A++LF R
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-R 223
Query: 130 MKRDGFAPD---PFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 186
D F ++V+ A S + +W + H V + G V +LL Y
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYA 282
Query: 187 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 246
C S ++ A K+F L H
Sbjct: 283 KCGS---------LSCAEKIF--------------------------------LRIRCHS 301
Query: 247 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 306
+ +++ +MI +HGL E A F +M + I + T ++ A ++GL N G +
Sbjct: 302 V-ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 307 AYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV---RDLVSWNAILS 361
+ + VV S H+ ++ + G++ +A E+ + V + + W A+LS
Sbjct: 361 SLMAEKYGVVPDSRHY-----TCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
Query: 362 GYINARRLEEAKFIFREVPERNLLT-------WTVMISGLAESGFGEESLKLFNQMK 411
A RL I E +R + + + + + A SG E+S L +MK
Sbjct: 416 ----AGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 168/412 (40%), Gaps = 57/412 (13%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N LI C SS + A LFD+ P P+ F+ L+ Y AG +L NA
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 100 --TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
L + + YN +V ++ + K+ +M+ +G PD +F++ + A+ +
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV-L 269
Query: 158 HCQQLHCDVVKWGVMCVPS----VLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS 213
++ D+ + +P N +L + C L ++ L S R+ D A L
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGF--CKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFD 269
S+ + G VR+ A +L MT P ++N ++ G + G+ +A
Sbjct: 328 -----SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
M G+ D TY L+ + G + + L ++R P+ + N L+
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY----TCNILL 438
Query: 330 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFR-------- 377
K G++ +A E+ KM + D V+ N I+ G + L++A I +
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 378 ---------------EVPERN----LLTWTVMISGLAESGFGEESLKLFNQM 410
+ E N L+T++ +++GL ++G E+ LF +M
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 159/385 (41%), Gaps = 67/385 (17%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPNPDI----FSRTTLLSAYSAAGNVKLAEKLFNATPVT- 100
++++ CKS A L K +I + ++ G++ A LFN +
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 101 -LRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-H 158
+ I+YN ++ + + KL M + P+ +FS ++ S + E +
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID--SFVKEGKLRE 351
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP 218
++LH +++ G+ AP D
Sbjct: 352 AEELHKEMIHRGI--------------------------------------AP----DTI 369
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
++T++I G+ + + L A +++D M P +N +I+GY + ++ + FRKM
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 334
G+ D TY +LI G N ++L ++ V P+ + L+
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN----IVTYKILLDGLCD 485
Query: 335 CGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLT 386
G+ +A E+F+K+ D+ +N I+ G NA ++++A +F +P + + T
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
+ +MI GL + G E+ LF +M+
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKME 570
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 159/371 (42%), Gaps = 63/371 (16%)
Query: 51 CKSSNIP-YAHHLFDKTPNPDIFSRTTLLS-AYSAAGNV-KLAEKLFNATPVTLRDTISY 107
CK + AH+L+ + + F R L A+SA G + KL + +TI++
Sbjct: 111 CKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE---------PNTITF 161
Query: 108 NAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVV 167
+ ++ A++L RM G PD + +T++ + L + +E L +V
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL-SGKEAEAMLLIDKMV 220
Query: 168 KWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY 227
++G C + + PVL + S T +A
Sbjct: 221 EYG-----------------CQPNAVTYGPVLNVMCK--------------SGQTALA-- 247
Query: 228 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 287
+ RK+ + AV ++ +I G +HG + AF+ F +M GI + TY
Sbjct: 248 -----MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
Query: 288 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 347
LI N G ++ G +L +++ + P+ + + LI + K GKL +A E+ +
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPN----VVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 348 MPVR----DLVSWNAILSGYINARRLEEAK----FIFREVPERNLLTWTVMISGLAESGF 399
M R D +++ +++ G+ L++A + + + N+ T+ ++I+G ++
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 400 GEESLKLFNQM 410
++ L+LF +M
Sbjct: 419 IDDGLELFRKM 429
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 194/458 (42%), Gaps = 92/458 (20%)
Query: 37 RLTPLIRNRLIDIYCKSSNIPYAHHLFD---KTPNP-DIFSRTTLLSAYSAAGNVKLAEK 92
RLT N LID+Y K+ + A +LF K+ P D + T++ G++ AE
Sbjct: 303 RLTSTF-NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES 361
Query: 93 LFNA------TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
L +P DT +YN ++ ++ D AA++ + ++++ G PD + VL
Sbjct: 362 LLKKMEEKGISP----DTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 147 GAM---SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI--------------CCA 189
+ ++AE E ++ + ++ VP ++ ++ + C
Sbjct: 418 HILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL 477
Query: 190 SSTL--------------VESPVLMASAR----------------KLFDEAPLSQK---- 215
SST VE+ + R K + +A L +K
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 216 -----------DEPSWTTMIAGYVRNDDLASARK----LLDGMTHPIAVAWNAMISGYVR 260
DE ++ ++ D + A++ +LD P + AMI+ YVR
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 261 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 320
GL +A D + M G++ +E Y SLI+ +G+ Q + VQ S H
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ-SNHI 656
Query: 321 ILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIF 376
+L+ +LI Y+K G L +AR V+DKM D+ + N++LS + + EA+ IF
Sbjct: 657 VLT---SLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 377 REVPER---NLLTWTVMISGLAESGFGEESLKLFNQMK 411
+ E+ +++++ M+ G +E++++ +M+
Sbjct: 714 NALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMR 751
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 129/308 (41%), Gaps = 24/308 (7%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLA 90
G + ++ LI Y K + A ++DK + PD+ + ++LS + G V A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 91 EKLFNATPVTLR-----DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
E +FNA LR D IS+ M+ Y A+++ M+ G D SF+ V
Sbjct: 710 ESIFNA----LREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Query: 146 LGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARK 205
+ + + C+ H +V+ ++ TL + + S + A
Sbjct: 766 MACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA---- 821
Query: 206 LFDEA-PLSQKDEPSWTTMI--AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 262
++EA PL+ P+ T + A + L S ++L G A+NA+I Y G
Sbjct: 822 -YNEAKPLAT---PAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASG 877
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 322
+ A + +M G++ D T L+ G+ +++H+ + ++PS+
Sbjct: 878 DIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFK 937
Query: 323 SVNNALIT 330
+V +A ++
Sbjct: 938 AVRDAYVS 945
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 164/397 (41%), Gaps = 56/397 (14%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPNPDIF----SRTTLLSAYSAAGNVKLAEKLFNATPV 99
N L+ +S N A + K D F S + LL Y A F +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFA---FGVLAL 132
Query: 100 TLRDTISYNA-----MVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAM----- 149
L+ ++N ++K NL+ AV L M+R+ PD FS++TV+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 150 ---SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+L E +V WG+ L+ + C + + E+ + + +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGI---------LIDAF--CKAGKMDEAMGFLKEMKFM 241
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHG 262
EA L +T++I G+ +L + L D + P A+ +N +I G+ + G
Sbjct: 242 GLEADL-----VVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 263 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFI 321
+EA + F M G++ + YTYT LI GL G+ A +L +++ E
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLID-----GLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 322 LSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEA-KFIF 376
N +I K G + A E+ + M R D +++N +L G L+EA K ++
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 377 REVPER-----NLLTWTVMISGLAESGFGEESLKLFN 408
+ + +++++ +I GL + ++L +++
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 168/405 (41%), Gaps = 63/405 (15%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
+A+ +L G + N LI +CK + A +F+ + P++++ T L+
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 80 AYSAAGNVKLAEKLFNATPVTLRD--TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
G K A +L N + ++YN ++ + AV++ MK+ P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D +++ +LG + CA L E+
Sbjct: 386 DNITYNILLGGL--------------------------------------CAKGDLDEAS 407
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA----VAWNA 253
L+ K ++ + D S+ +I G + + L A + D + + V N
Sbjct: 408 KLLYLMLK---DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+++ ++ G +A + ++++ I + TYT++I TG+ N + L + +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 314 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRL 369
+QPS + N L++ K G L QA +F++M D+VS+N ++ G + A +
Sbjct: 525 LQPS----VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 370 EEAKFIF----REVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
+ A+ + R +L T++ +I+ + G+ +E++ F++M
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 216 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA----VAWNAMISGYVRHGLYEEAFDTF 271
D S+ T+I G+ +L A +L + M V W +I + + G +EA
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 272 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
++M MG++ D YTSLI + G + G+ L VL P N LI
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA----ITYNTLIRG 291
Query: 332 YTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEA----KFIFREVPERN 383
+ K G+L +A E+F+ M R ++ ++ ++ G + +EA + + E N
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQMK 411
+T+ ++I+ L + G +++++ MK
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMK 379
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 60/322 (18%)
Query: 101 LRDTISY-NAMVKAYSHNLDGHAAVKLFVRMKRDGFAP-DPFSFSTVLGAMSLIAEEEWH 158
L T+S+ N M++A+S + +LF ++R+ P +P S S L + + +
Sbjct: 73 LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKC-CIKSGDLLG 131
Query: 159 CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP 218
Q+H + G + ++ TL+ Y C +ST A K+FDE P ++D
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENST---------DACKVFDEIP--KRD-- 178
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-- 276
V+WN + S Y+R+ + F KM +
Sbjct: 179 -----------------------------TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDV 209
Query: 277 -MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 335
++ D T + A N G + G+Q+H ++ + + L+++N L++ Y++C
Sbjct: 210 DGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA----LNLSNTLVSMYSRC 265
Query: 336 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV------PERNLLTWTV 389
G + +A +VF M R++VSW A++SG +EA F E+ PE T T
Sbjct: 266 GSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ--TLTG 323
Query: 390 MISGLAESGFGEESLKLFNQMK 411
++S + SG E + F++M+
Sbjct: 324 LLSACSHSGLVAEGMMFFDRMR 345
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRD- 133
TTL+ YS N A K+F+ P RDT+S+N + Y N + LF +MK D
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPK--RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDV 209
Query: 134 --GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
PD + L A + + ++ +Q+H + + G+ ++ NTL+S Y C S
Sbjct: 210 DGCVKPDGVTCLLALQACANLGALDFG-KQVHDFIDENGLSGALNLSNTLVSMYSRCGS- 267
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
M A ++F + +++ SWT
Sbjct: 268 --------MDKAYQVF--YGMRERNVVSWT------------------------------ 287
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
A+ISG +G +EA + F +M GI +E T T L+SA ++GL
Sbjct: 288 -ALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGL 333
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 134/319 (42%), Gaps = 53/319 (16%)
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF----STVLGAMSLIAE 154
+ ++ +++N+M+ A+ G A+ +F+RM DG D + S++ + L+
Sbjct: 221 IKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPN 280
Query: 155 E-EWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS 213
E C QLH VK G++ V L+ Y S ++E
Sbjct: 281 EVSKCCLQLHSLTVKSGLVTQTEVATALIKVY-----SEMLE------------------ 317
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH-PIAVAWNAMISGYVRHGLYEEAFDTFR 272
D KL M+H VAWN +I+ + + E A F
Sbjct: 318 ------------------DYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFG 358
Query: 273 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 332
++ + D YT++S++ A +HA V++ +NN+LI Y
Sbjct: 359 QLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADT----VLNNSLIHAY 414
Query: 333 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-ERNLLTWTVMI 391
KCG L VFD M RD+VSWN++L Y +++ +F+++ + T+ ++
Sbjct: 415 AKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALL 474
Query: 392 SGLAESGFGEESLKLFNQM 410
S + +G EE L++F M
Sbjct: 475 SACSHAGRVEEGLRIFRSM 493
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 58/312 (18%)
Query: 102 RDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQ 161
RD +++N ++ A++ D A+ LF +++++ +PD ++FS+VL A + + H
Sbjct: 333 RDIVAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTAR-HALS 390
Query: 162 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 221
+H V+K G + + N+L+ Y C S L
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDL---------------------------- 422
Query: 222 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
++ D M V+WN+M+ Y HG + F+K M I
Sbjct: 423 --------------CMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQK---MDINP 465
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF-ILSVNNALITFYTKCGKLVQ 340
D T+ +L+SA + G G + + R++ + E L+ +I ++ + +
Sbjct: 466 DSATFIALLSACSHAGRVEEGLR----IFRSMFEKPETLPQLNHYACVIDMLSRAERFAE 521
Query: 341 AREVFDKMPVR-DLVSWNAILSG---YINARRLEEAKFIFREVPERNLLTWTVMISGL-- 394
A EV +MP+ D V W A+L + N R + A +E+ E + +S +
Sbjct: 522 AEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYN 581
Query: 395 AESGFGEESLKL 406
AE F E +L +
Sbjct: 582 AEGSFNEANLSI 593
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 71/319 (22%)
Query: 60 HHLFDKTPNPDIFSRTTLLS-----AYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAY 114
HH+ +P +S+ +L+ Y+ GN+ A ++F+ P R+ +S+ A++ Y
Sbjct: 83 HHMLS---HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPE--RNVVSWTALITGY 137
Query: 115 SHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCV 174
+ LF M F P+ F+ S+VL + +Q+H +K G+ C
Sbjct: 138 VQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRYEPG-----KQVHGLALKLGLHCS 191
Query: 175 PSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 234
V N ++S Y C A+A + +WT A +N
Sbjct: 192 IYVANAVISMYGRCHDG---------AAAYE-------------AWTVFEAIKFKN---- 225
Query: 235 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 294
V WN+MI+ + L ++A F +MHS G+ D T ++ S+ +
Sbjct: 226 -------------LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLY 272
Query: 295 NTG------LFNCGRQLHAYVLRT-VVQPSE--HFILSVNNALITFYTKCGKLVQAREVF 345
+ + C QLH+ +++ +V +E ++ V + ++ YT C KL F
Sbjct: 273 KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL------F 326
Query: 346 DKMP-VRDLVSWNAILSGY 363
+M RD+V+WN I++ +
Sbjct: 327 MEMSHCRDIVAWNGIITAF 345
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 302 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 361
G LH ++L S++ IL+ N LI Y KCG ++ AR+VFD MP R++VSW A+++
Sbjct: 78 GINLHHHMLSHPYCYSQNVILA--NFLINMYAKCGNILYARQVFDTMPERNVVSWTALIT 135
Query: 362 GYINARRLEEAKFIF 376
GY+ A +E +F
Sbjct: 136 GYVQAGNEQEGFCLF 150
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAYSA 83
A +IHA ++ GF ++ N LI Y K ++ +FD + D+ S ++L AYS
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 84 AGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM 130
G V +F + D+ ++ A++ A SH +++F M
Sbjct: 448 HGQVDSILPVFQKMDIN-PDSATFIALLSACSHAGRVEEGLRIFRSM 493
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 179/445 (40%), Gaps = 94/445 (21%)
Query: 9 LFLAQLNHPSATQT-------LARAIHAHILTTGFRLTPLIRNR-----------LIDIY 50
LF + HP + L R ++ R+ LIR++ +I Y
Sbjct: 29 LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTY 88
Query: 51 CKSSNIPYAHHLFDKTPN-----PDIFSRTTLLSAYSAAGNVKLAEKLFN--ATPVTLRD 103
K+S A +F + P I S TLL+A+ A E LF T +
Sbjct: 89 GKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPN 148
Query: 104 TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLH 163
+YN ++K + A M ++GF PD FS+STV+
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN---------------- 192
Query: 164 CDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK----DEPS 219
D+ K G + A +LFDE +S++ D
Sbjct: 193 -DLAKAGKL----------------------------DDALELFDE--MSERGVAPDVTC 221
Query: 220 WTTMIAGYVRNDDLASA-----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
+ +I G+++ D +A R L D +P N MISG + G ++ + +M
Sbjct: 222 YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERM 281
Query: 275 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYT 333
+ D YTY+SLI GL + G A V + + + N ++ +
Sbjct: 282 KQNEREKDLYTYSSLIH-----GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 334 KCGKLVQAREVFDKMPVR---DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLT 386
+CGK+ ++ E++ M + ++VS+N ++ G + +++EA I+R +P + + T
Sbjct: 337 RCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 387 WTVMISGLAESGFGEESLKLFNQMK 411
+ + I GL +G+ ++L + +++
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVE 421
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 169/403 (41%), Gaps = 41/403 (10%)
Query: 25 RAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSA 80
++ A+ T G N LI + CK A D + PD+FS +T+++
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193
Query: 81 YSAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG-FAP 137
+ AG + A +LF+ + D YN ++ + D A++L+ R+ D P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
+ + + ++ +S C ++ + W M L + S+L+
Sbjct: 254 NVKTHNIMISGLS-------KCGRVDDCLKIWERMKQNEREKDLYT------YSSLIHGL 300
Query: 198 VLMAS---ARKLFDEAPLSQK--DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV--- 249
+ A +F+E + D ++ TM+ G+ R + + +L M H +V
Sbjct: 301 CDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Query: 250 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 309
++N +I G + +G +EA +R M + G D+ TY I G N + L V
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN--KALG--V 416
Query: 310 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV----SWNAILSGYIN 365
++ V H + ++I K +L +A + +M + NA++ G I
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 366 ARRLEEAKFIFREVPERN----LLTWTVMISGLAESG-FGEES 403
RL EA F RE+ + ++++ ++I GL ++G FGE S
Sbjct: 477 DSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 165/391 (42%), Gaps = 44/391 (11%)
Query: 46 LIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL 101
LI +C+ S + +A + K P I + +LL + + A F+ + +
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA---FSLVILMV 168
Query: 102 R-----DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE 156
+ + + YN ++ N + + A++L M++ G D +++T+L +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 157 WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
+ L D++K + L+ ++ L E A++L+ E S D
Sbjct: 229 DAARMLR-DMMKRSINPDVVTFTALIDVFV--KQGNLDE-------AQELYKEMIQSSVD 278
Query: 217 --EPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDT 270
++ ++I G + L A+K D M P V +N +ISG+ + + +E
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
F++M G D +TY +LI G + +++ V P + I
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP------DIITHCIL 392
Query: 331 FYTKC--GKLVQAREVFDKMPVRD----LVSWNAILSGYINARRLEEAKFIFREVPERNL 384
+ C G++ A FD M + +V++N ++ G A ++E+A +F +P +
Sbjct: 393 LHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV 452
Query: 385 ----LTWTVMISGLAESGFGEESLKLFNQMK 411
T+T+MI GL ++G E+ +L +MK
Sbjct: 453 KPDARTYTIMILGLCKNGPRREADELIRRMK 483
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 162/393 (41%), Gaps = 66/393 (16%)
Query: 35 GFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVK-- 88
GF N L+ CK++ + A L + N PD S TT++S+ G VK
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 89 --LAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVL 146
LAE+ V YNA++ D A +L M G +P+ S+ST++
Sbjct: 236 RELAERFEPVVSV-------YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 147 GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKL 206
+ + E L ++K G C P++ S+LV+ L +
Sbjct: 289 NVLCNSGQIELAFSFLT-QMLKRG--CHPNIYTL----------SSLVKGCFLRGTT--- 332
Query: 207 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE 266
FD L W MI G+ G+ P VA+N ++ G+ HG +
Sbjct: 333 FDALDL-------WNQMIRGF--------------GL-QPNVVAYNTLVQGFCSHGNIVK 370
Query: 267 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 326
A F M +G + TY SLI+ G + + +L + P+ + V
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN----VVVYT 426
Query: 327 ALITFYTKCGKLVQAREVFDKMPVRDLV----SWNAILSGYINARRLEEAKFIFREVPER 382
++ + K +A + + M + ++NA + G +A RL+ A+ +FR++ ++
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 383 -----NLLTWTVMISGLAESGFGEESLKLFNQM 410
N++T+ ++ GLA++ EE+ L ++
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 150/373 (40%), Gaps = 42/373 (11%)
Query: 46 LIDIYCKSSNIPYAH----HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTL 101
LI++ C S I A + + +P+I++ ++L+ G A L+N
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 102 R---DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
+ ++YN +V+ + + + AV +F M+ G +P+ ++ +++ +
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG----- 401
Query: 159 CQQLHCDVVKWGVM----CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
L V W M C P+V+ C S E+ L+ K + AP
Sbjct: 402 --SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE-NCAP--- 455
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGMTH-----PIAVAWNAMISGYVRHGLYEEAFD 269
P++ I G L A K+ M P V +N ++ G + EEA+
Sbjct: 456 -SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
R++ G++ TY +L+ S N GL QL ++ P E + N +I
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM----NMII 570
Query: 330 TFYTKCGKLVQAREVFDKMPVR------DLVSWNAILSGYINARRLEEAKFIFREVPERN 383
Y K GK +A ++ D + D++S+ ++ G + E+ + +
Sbjct: 571 LAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630
Query: 384 LL----TWTVMIS 392
++ TW+V+I+
Sbjct: 631 IVPSIATWSVLIN 643
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 170/402 (42%), Gaps = 87/402 (21%)
Query: 36 FRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP------NPDIFSRTTLLSAYSAAGNVKL 89
F+ TPL +I + +L + + D+F +++S Y G +
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLF--ISVISVYRQVGLAER 129
Query: 90 AEKLFNATPVTLRDTISYNAMVKAYSHNLD---GHAAVKL----FVRMKRDGFAPDPFSF 142
A ++F + VK Y+H LD G +++ + MKRDGF P+ F++
Sbjct: 130 AVEMFYRI-----KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 184
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ +L A+ C+ D
Sbjct: 185 NVLLKAL---------CKNNKVD------------------------------------G 199
Query: 203 ARKLFDEAPLSQK----DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
A+KL E +S K D S+TT+I+ + R+L + P+ +NA+I+G
Sbjct: 200 AKKLLVE--MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-EPVVSVYNALINGL 256
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
+ Y+ AF+ R+M GI + +Y++LI+ N+G +L+ P+
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN- 315
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR------DLVSWNAILSGYINARRLEEA 372
I ++++ + + + G A +++++M +R ++V++N ++ G+ + + +A
Sbjct: 316 --IYTLSSLVKGCFLR-GTTFDALDLWNQM-IRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 373 KFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQM 410
+F + E N+ T+ +I+G A+ G + ++ ++N+M
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 137/333 (41%), Gaps = 56/333 (16%)
Query: 70 DIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVR 129
D + +L++ Y A KLF+ P R+ +S+ AM+K Y ++ +KLF
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPE--RNVVSWCAMMKGYQNSGFDFEVLKLFKS 125
Query: 130 MKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
M G + P+ F + V + S E +Q H +K+G++ V NTL+ Y C
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGRIE-EGKQFHGCFLKYGLISHEFVRNTLVYMYSLC 184
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
+ + A ++LD + +
Sbjct: 185 SGN------------------------------------------GEAIRVLDDLPYCDL 202
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
+++ +SGY+ G ++E D RK + + TY S + N N Q+H+
Sbjct: 203 SVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
++R + ALI Y KCGK++ A+ VFD +++ I+ Y +
Sbjct: 263 MVRFGFNAE----VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 369 LEEAKFIF-----REVPERNLLTWTVMISGLAE 396
EEA +F +EVP N T+ ++++ +AE
Sbjct: 319 FEEALNLFSKMDTKEVPP-NEYTFAILLNSIAE 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 131/347 (37%), Gaps = 90/347 (25%)
Query: 22 TLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPNPDIFSRTTLLSAY 81
LA +H+ ++ GF LI++Y K + YA +FD T +IF TT++ AY
Sbjct: 254 NLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAY 313
Query: 82 SAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
+K F A+ LF +M P+ ++
Sbjct: 314 -------FQDKSF--------------------------EEALNLFSKMDTKEVPPNEYT 340
Query: 142 FSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPV 198
F+ +L + +SL+ + + LH V+K G + V
Sbjct: 341 FAILLNSIAELSLLKQGDL----LHGLVLKSGY-----------------------RNHV 373
Query: 199 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 258
++ +A ++ Y ++ + ARK GMT V WN MISG
Sbjct: 374 MVGNA-------------------LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS 317
HGL EA + F +M G + T+ ++ A + G G +++ VQP
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Query: 318 -EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 362
+H+ ++ +K G A + P+ D+V+W +L+
Sbjct: 475 IQHY-----TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 215 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 274
+D ++I YV+ + ARKL D M V+W AM+ GY G E F+ M
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 275 HSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 333
G + +E+ T + + N+G G+Q H L+ + E V N L+ Y+
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF----VRNTLVYMYS 182
Query: 334 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
C +A V D +P DL +++ LSGY+ +E + R+ + +
Sbjct: 183 LCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV 234
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
L+ N+ G +HA+++ T +N +LI Y KC + V+AR++FD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQIN-SLINLYVKCRETVRARKLFD 93
Query: 347 KMPVRDLVSWNAILSGYINARRLEEAKFIFREV-----PERNLLTWTVMISGLAESGFGE 401
MP R++VSW A++ GY N+ E +F+ + N TV+ + SG E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 402 ES 403
E
Sbjct: 154 EG 155
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 332 YTKCGKLVQAREVFDKMPVR--DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTV 389
Y + G+ + A + R D N++++ Y+ R A+ +F +PERN+++W
Sbjct: 46 YLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 390 MISGLAESGFGEESLKLFNQM 410
M+ G SGF E LKLF M
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSM 126
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 165/439 (37%), Gaps = 85/439 (19%)
Query: 37 RLTP--LIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLA 90
R+ P I N LID CK + A LFD+ P + + TL+ Y AGN
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN---P 265
Query: 91 EKLFNATPVTLRD-----TISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTV 145
EK F D I++N ++K A + MK GF PD F+FS +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 146 LGAMSLIAEEEWHCQQLHCDV---VKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
S + E V VK +LN L C + ++ ++
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL------CKEGKIEKAEEILGR 379
Query: 203 --ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMIS 256
A+ L +E + TMI GY R DL AR ++ M P +A+N +I
Sbjct: 380 EMAKGLV-------PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA------------------------ 292
+ G E A KM G+ TY LI
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 293 ---SFNTGLFNC----GRQLHAYVLRT-----VVQPSEHFILSVNNALITFYTKCGKLVQ 340
S+ T L NC + L A +++ V P + + N LI GK+
Sbjct: 493 NVVSYGT-LINCLCKGSKLLEAQIVKRDMEDRGVSPK----VRIYNMLIDGCCSKGKIED 547
Query: 341 A----REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMIS 392
A +E+ K +LV++N ++ G +L EA+ + E+ + L T+ +IS
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 393 GLAESGFGEESLKLFNQMK 411
G +G + + L+ +MK
Sbjct: 608 GYGFAGNVQRCIALYEEMK 626
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 166/432 (38%), Gaps = 53/432 (12%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLS 79
A I + G +I N +ID YC+ ++ A + + PD + L+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 80 AYSAAGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ G ++ AEK N + +YN ++ Y + + M+ +G P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
+ S+ T++ + + Q + D+ GV + N L+ CC+ + ++
Sbjct: 493 NVVSYGTLINCLCK-GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG--CCSKGKIEDAF 549
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNA 253
K E L ++ T+I G L+ A LL ++ P +N+
Sbjct: 550 RFSKEMLKKGIELNLV-----TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR---------- 303
+ISGY G + + +M GI+ TY LIS G+ R
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPD 664
Query: 304 ------QLHAYVL-----------RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
LH Y + + +++ S + N+LI K GKL + R + D
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID 724
Query: 347 KMPVRDLV----SWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESG 398
+M R++ ++N I+ G+ + A +RE+ E+ L ++SGL E
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEW 784
Query: 399 FGEESLKLFNQM 410
+E+ + ++M
Sbjct: 785 RSKEAEIVISEM 796
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 169/423 (39%), Gaps = 63/423 (14%)
Query: 2 DSRTMANLFLAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHH 61
D+ T + LF ++ A L ++ + +G ++ + L++ CK I A
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALG--VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 62 LFDK------TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVT--LRDTISYNAMVKA 113
+ + PN I++ T++ Y G++ A A D ++YN +++
Sbjct: 376 ILGREMAKGLVPNEVIYN--TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 114 YSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMC 173
+ + A K +MK G +P +++ ++G E + C + ++ G M
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD-KCFDILKEMEDNGTM- 491
Query: 174 VPSVLN--TLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 231
P+V++ TL++C C S L+E+ ++
Sbjct: 492 -PNVVSYGTLINCL--CKGSKLLEAQIV-------------------------------- 516
Query: 232 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 291
R + D P +N +I G G E+AF ++M GI+++ TY +LI
Sbjct: 517 ----KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 292 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP-- 349
TG + L + R ++P + N+LI+ Y G + + ++++M
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPD----VFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 350 -VRDLVSWNAILSGYINARRLEEAKFIFREVPER-NLLTWTVMISGLAESGFGEESLKLF 407
++ + +L +E + +F E+ + +LL + ++ A G E++ L
Sbjct: 629 GIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 408 NQM 410
QM
Sbjct: 689 KQM 691
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 148/346 (42%), Gaps = 57/346 (16%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM- 130
F L+ Y G+ AEKLF+ P RD +S+N+++ YS ++ RM
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPE--RDLVSWNSLISGYSGRGYLGKCFEVLSRMM 124
Query: 131 -KRDGFAPDPFSFSTVLGAMSLI-AEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 188
GF P+ +F +++ A ++EE C +H V+K+GV+ V+N ++
Sbjct: 125 ISEVGFRPNEVTFLSMISACVYGGSKEEGRC--IHGLVMKFGVLEEVKVVNAFIN----- 177
Query: 189 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 248
W Y + DL S+ KL + ++
Sbjct: 178 -------------------------------W------YGKTGDLTSSCKLFEDLSIKNL 200
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 308
V+WN MI ++++GL E+ F +G + D+ T+ +++ + + G+ + +H
Sbjct: 201 VSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 309 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 368
++ ++ + AL+ Y+K G+L + VF ++ D ++W A+L+ Y
Sbjct: 261 IMFGGFSGNK----CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGF 316
Query: 369 LEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 410
+A F + + +T+T +++ + SG EE F M
Sbjct: 317 GRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 287 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 346
+SLI+A + R LH V+++V FI + L+ Y + G V A ++FD
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSV-SYRHGFI---GDQLVGCYLRLGHDVCAEKLFD 90
Query: 347 KMPVRDLVSWNAILSGYINARRLEE-----AKFIFREVPER-NLLTWTVMISGLAESGFG 400
+MP RDLVSWN+++SGY L + ++ + EV R N +T+ MIS G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 401 EES 403
EE
Sbjct: 151 EEG 153
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 221 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 280
T ++ Y + L + + +T P ++AW AM++ Y HG +A F M GI
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS 333
Query: 281 MDEYTYTSLISASFNTGLFNCGRQ-LHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKL 338
D T+T L++A ++GL G+ R + P +H+ + ++ + G L
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY-----SCMVDLLGRSGLL 388
Query: 339 VQAREVFDKMPVRDLVS-WNAILSG---YINARRLEEAKFIFREVPERNLLTWTVMISGL 394
A + +MP+ W A+L Y + + +A E+ R+ + ++ +
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIY 448
Query: 395 AESGFGEESLKLFNQMK 411
+ SG +++ ++ N MK
Sbjct: 449 SASGLWKDASRIRNLMK 465
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 48/241 (19%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFD 269
+D S++ +I G + ++ A LL M P + + A+I G + G EEAF
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
F ++ S+GI++DE+ Y +LI G N + + + +QPS IL+ N +I
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS---ILTYN-TVI 389
Query: 330 TFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA----------RRLEEAKF----- 374
G++ +A EV K V D+++++ +L YI RR EAK
Sbjct: 390 NGLCMAGRVSEADEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLV 448
Query: 375 --------------------IFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
++R +PE +L T+ MI G ++G EE+L++FN++
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 411 K 411
+
Sbjct: 509 R 509
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 151/382 (39%), Gaps = 45/382 (11%)
Query: 69 PDIFSRTTLLSAYSAAGNVKLAEKLFNAT-PVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
PD + T++ Y G ++ A ++FN ++ + YN ++ A A ++
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
Query: 128 VRMKRDGFAPDPFSFSTVL------GAMSLIAEEEWHCQQLHCDVV------KWGVMCVP 175
+ + G D + T+L G I + +QL+ DV ++C
Sbjct: 540 IELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKR 599
Query: 176 SVLNTLLSCYICCASSTLVES------PVLMASARKL--------FDEAPLSQKDEPSWT 221
+ Y+ L + L+ + R L E LS D +T
Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYT 659
Query: 222 TMIAGYVRNDDLASARKLLD-----GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 276
+I G + L A L G+T + +N++I+G + G EA F + +
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLN-TITYNSLINGLCQQGCLVEALRLFDSLEN 718
Query: 277 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 336
+G+ E TY LI GLF +L ++ + P+ + + N+++ Y K G
Sbjct: 719 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN----IIIYNSIVDGYCKLG 774
Query: 337 KLVQA-REVFDKMPVR---DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWT 388
+ A R V KM R D + ++++ GY +EEA +F E ++N+ +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 389 VMISGLAESGFGEESLKLFNQM 410
+I G G EE+ L +M
Sbjct: 835 FLIKGFCTKGRMEEARGLLREM 856
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMT-----HPIA-VAWNAMISGYVRHGLYEEAFDTFR 272
++ ++I +V ++ +A ++L+ MT +P +A+ISG+ + G E A F
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 273 KMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 331
G+ + + TYT+L+SA G + R L +R + F + I
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL----VRRLEDEGFEFDCVFYSNWIHG 251
Query: 332 YTKCGKLV----QAREVFDKMPVRDLVSWNAILSGYINARRLEEA----KFIFREVPERN 383
Y K G LV Q RE+ +K RD+VS++ ++ G +EEA + +E E N
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 384 LLTWTVMISGLAESGFGEESLKLFNQM 410
L+T+T +I GL + G EE+ LFN++
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRI 338
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 55/419 (13%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLF----DKTPNPDIFSRTTLLS 79
A +H +++ G R I N LI+ YCKS + A +F D + PD + TL+
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 80 AYSAAGNVKLAEKLFN--ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
Y AG V A KL + + ++YN ++K YS H + L+ M + G
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D S ST+L A+ + + +L +V+ G++ LN ++S C + E+
Sbjct: 470 DEISCSTLLEALFKLGDFN-EAMKLWENVLARGLLTDTITLNVMISGL--CKMEKVNEAK 526
Query: 198 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNA 253
++ + +F P Q ++ + GY + +L A + + M P +N
Sbjct: 527 EILDNV-NIFRCKPAVQ----TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 254 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 313
+ISG ++ + D ++ + G+ TY +LI+ N G+ + AY T
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID-----KAYA--TC 634
Query: 314 VQPSEHFI-LSVNNALITFYTKCGKLVQAREVFDKMP-----VRDLVSWNAILSGYINAR 367
+ E I L+VN C K+ + DK+ ++ +V ++ +L GY + +
Sbjct: 635 FEMIEKGITLNVN--------ICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 368 RLEEA------------KFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
EA + + P++ N + + V I+GL ++G E++ KLF+ +
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 147/362 (40%), Gaps = 76/362 (20%)
Query: 59 AHHLFDK----TPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR---DTISYNAMV 111
A H++D+ +PD+F+ + +++AY +GNV A T +L + ++YN+++
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 112 KAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV 171
Y+ D ++ M G + + ++++++ + +C++
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLI---------KGYCKK---------- 309
Query: 172 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQK----DEPSWTTMIAGY 227
LM A +F+ L +K D+ + ++ GY
Sbjct: 310 --------------------------GLMEEAEHVFE--LLKEKKLVADQHMYGVLMDGY 341
Query: 228 VRNDDLASARKLLDGMTHPIAV-----AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 282
R + A ++ D M I V N++I+GY + G EA F +M+ ++ D
Sbjct: 342 CRTGQIRDAVRVHDNMIE-IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 283 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 342
+TY +L+ G + +L + + V P+ + N L+ Y++ G
Sbjct: 401 HHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT----VMTYNILLKGYSRIGAFHDVL 456
Query: 343 EVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWT----VMISGL 394
++ M R D +S + +L EA ++ V R LLT T VMISGL
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 395 AE 396
+
Sbjct: 517 CK 518
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V +N++I+GY G E R M G+ + TYTSLI GL +
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM---PVR-DLVSWNAILSGY 363
+ + +H L+ Y + G++ A V D M VR + N++++GY
Sbjct: 321 LLKEKKLVADQHMY----GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 364 INARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQM 410
+ +L EA+ IF + + +L T+ ++ G +G+ +E+LKL +QM
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 151/404 (37%), Gaps = 71/404 (17%)
Query: 30 HILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTLLSAYSAAG 85
++L G + N +I CK + A + D P + + L Y G
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 86 NVKLAEKLFNATPVTLRDTI-----SYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPF 140
N+K A F R I YN ++ + L + ++ G P
Sbjct: 556 NLKEA---FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 141 SFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSC----YICCASSTL 193
++ ++ + +I + C ++ + V + N+L C +
Sbjct: 613 TYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKI 672
Query: 194 VESPVLMASARKL--FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 251
V+ +L+ + L F EA + T IA V N ++ +KLL P + +
Sbjct: 673 VDFDLLLPGYQSLKEFLEASATT---CLKTQKIAESVEN---STPKKLL----VPNNIVY 722
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVL 310
N I+G + G E+A F + S + DEYTYT LI G N A+ L
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN-----KAFTL 777
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
R E+ K + ++V++NA++ G ++
Sbjct: 778 RD------------------------------EMALKGIIPNIVTYNALIKGLCKLGNVD 807
Query: 371 EAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
A+ + ++P++ N +T+ +I GL +SG E+++L +M
Sbjct: 808 RAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 154/358 (43%), Gaps = 62/358 (17%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVK 125
P +++ L++ +A V AE++F + D ++YN M+K Y A++
Sbjct: 219 EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAME 278
Query: 126 LFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSC 184
M+ G D ++ T++ A A+ ++ C L+ ++ + G+ P + ++
Sbjct: 279 KLRDMETRGHEADKITYMTMIQA--CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 185 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPS---WTTMIAGYVRNDDLASARKLLD 241
C L E + E + + +P+ +T +I GY ++ + A +LL
Sbjct: 337 L--CKEGKLNEGYTVF--------ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLH 386
Query: 242 GMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
M P V ++ +++G ++G EEA D F G+ ++ Y+SLI G
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID-----G 441
Query: 298 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 357
L GR V +E E+ +K RD +N
Sbjct: 442 LGKAGR----------VDEAERLF--------------------EEMSEKGCTRDSYCYN 471
Query: 358 AILSGYINARRLEEAKFIFREVPE-----RNLLTWTVMISGLAESGFGEESLKLFNQM 410
A++ + R+++EA +F+ + E + + T+T+++SG+ + EE+LKL++ M
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 184/435 (42%), Gaps = 65/435 (14%)
Query: 7 ANLFLAQLNHPSATQTLARA--------IHAHILTTGFRLTPLIRNRLIDIYCKSSNIPY 58
A + L ++N S T+ L A + ++ GF +++++ C +S +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 59 AHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFN------ATPVTLRDTISYN 108
A LF++ D+++ T ++ ++ AG ++ A K FN TP + ++Y
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP----NVVTYT 557
Query: 109 AMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVK 168
A++ AY A +LF M +G P+ ++S ++ + E CQ
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ-------- 609
Query: 169 WGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 228
+ + C S + + + K +D+ + + ++ ++ G+
Sbjct: 610 --------IFERM------CGSKDVPDVDMYF----KQYDDNS-ERPNVVTYGALLDGFC 650
Query: 229 RNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 284
++ + ARKLLD M+ P + ++A+I G + G +EA + +M G Y
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 285 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 344
TY+SLI F + ++ + +L P+ + + +I K GK +A ++
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN----VVIYTEMIDGLCKVGKTDEAYKL 766
Query: 345 FDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAE 396
M + ++V++ A++ G+ ++E + + + N +T+ V+I +
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 397 SGFGEESLKLFNQMK 411
+G + + L +MK
Sbjct: 827 NGALDVAHNLLEEMK 841
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 175/424 (41%), Gaps = 58/424 (13%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGN 86
++ G +P I N L+ YC S + YA+ L K P L+ + +
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 87 ------VKLAEKLFN---ATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+ LAEK ++ A V L + I+ ++ + A + M GF P
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVL-NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 197
D ++S VL + ++ E L + +K G + T++ C A
Sbjct: 482 DTSTYSKVLNYLCNASKMEL--AFLLFEEMKRGGLVADVYTYTIMVDSFCKAG------- 532
Query: 198 VLMASARKLFDEAPL--SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAW 251
L+ ARK F+E + ++T +I Y++ ++ A +L + M P V +
Sbjct: 533 -LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 252 NAMISGYVRHGLYEEAFDTFRKM------HSMGIQMDEY----------TYTSLISASFN 295
+A+I G+ + G E+A F +M + + +Y TY +L+
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD--- 352
+ R+L + +P++ V +ALI K GKL +A+EV +M
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQ----IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 353 -LVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLF 407
L ++++++ Y +R + A + ++ E N++ +T MI GL + G +E+ KL
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 408 NQMK 411
M+
Sbjct: 768 QMME 771
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 142/305 (46%), Gaps = 34/305 (11%)
Query: 123 AVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE-----WHCQQLHCDVVKWGVMCVPSV 177
++ LF M + P FS +L A+S + + + W Q+ G+
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM------LGIPHNLCT 118
Query: 178 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 237
N LL+C+ C+ +L S + KL E + ++ +++ G+ R D + A
Sbjct: 119 CNILLNCFCRCSQLSLALS--FLGKMIKLGHEPSIV-----TFGSLLNGFCRGDRVYDAL 171
Query: 238 KLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 293
+ D M P V +N +I G + + A D +M GI D TY SLIS
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 294 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-- 351
++G ++ ++ + + + + P + NALI K G++ +A E +++M R
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPD----VFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 352 --DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLK 405
D+V+++ ++ G RL+EA+ +F + + +++T++++I+G +S E +K
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 406 LFNQM 410
LF +M
Sbjct: 348 LFCEM 352
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 159/389 (40%), Gaps = 36/389 (9%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATPV 99
N L++ +C+ S + A K P I + +LL+ + V A +F+ V
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM-V 178
Query: 100 TLR---DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEE 156
+ + + YN ++ + A+ L RM++DG PD ++++++ +
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 157 WHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
+ + C + K + N L+ + + E V + A + ++E D
Sbjct: 239 DATRMVSC-MTKREIYPDVFTFNALID-------ACVKEGRV--SEAEEFYEEMIRRSLD 288
Query: 217 EP--SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDT 270
+++ +I G L A ++ M P V ++ +I+GY + E
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 330
F +M G+ + TYT LI G N ++ ++ V P+ + N L+
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN----IITYNVLLH 404
Query: 331 FYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNLL- 385
GK+ +A + M D+V++N I+ G A + +A I+ + + L+
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 386 ---TWTVMISGLAESGFGEESLKLFNQMK 411
T+T M+ GL + G E+ LF +MK
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 123/286 (43%), Gaps = 34/286 (11%)
Query: 30 HILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTP----NPDIFSRTTLLSAYSAAG 85
++ G++ +I N +ID CKS + A L ++ PD+ + +L+S ++G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 86 NVKLAEKLFNATPVTLR----DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFS 141
A ++ + +T R D ++NA++ A A + + M R PD +
Sbjct: 236 RWSDATRM--VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 142 FSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVL 199
+S ++ + + + + +++ +V G C P V+ + L++ Y C S +
Sbjct: 294 YSLLIYGLCMYSRLD-EAEEMFGFMVSKG--CFPDVVTYSILINGY--CKSKKV------ 342
Query: 200 MASARKLFDEAPLSQ----KDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAW 251
KLF E +SQ ++ ++T +I GY R L A ++ M HP + +
Sbjct: 343 -EHGMKLFCE--MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 252 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 297
N ++ G +G E+A M G+ D TY +I G
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 177/428 (41%), Gaps = 76/428 (17%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNA-TP 98
N L++ +C+SS A K PDI + T+L++ + ++ A + N
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 99 VTLR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEW 157
+ ++ D + Y ++ + N + A+ LF +M+ G PD +++++ L W
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG--LCNSGRW 228
Query: 158 H-CQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKD 216
L + K + N L+ ++ E L A +L++E +
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFV-------KEGKFL--DAEELYNEM-IRMSI 278
Query: 217 EP---SWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFD 269
P ++T++I G+ + AR++ M P VA+ ++I+G+ + ++A
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 329
F +M G+ + TYT+LI G N +++ ++++ V P+ + N L+
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN----IRTYNVLL 394
Query: 330 TFYTKCGKLVQAREVFDKMPVRDLV-------SWNAILSGYINARRLEEAKFIFREVPER 382
GK+ +A +F+ M R++ ++N +L G +LE+A +F ++ +R
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 383 ---------------------------------------NLLTWTVMISGLAESGFGEES 403
N++T+T MISGL G E+
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Query: 404 LKLFNQMK 411
LF +MK
Sbjct: 515 HVLFRKMK 522
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 161/370 (43%), Gaps = 36/370 (9%)
Query: 61 HLFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNATPV--TLRDTISYNAMVKAYSHNL 118
H+ + P P I T LL+ + + L + + D + N ++ + +
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 119 DGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL 178
+ A +M + GF PD +F++++ L E ++ +V+ G+ P V+
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN-QMVEMGIK--PDVV 178
Query: 179 NTLLSCYICCASSTLVESPVL---MASARKLFD--EAPLSQKDEPSWTTMIAGYVRNDDL 233
+T+++S + A LFD E + D +T+++ G +
Sbjct: 179 ----------MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 234 ASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
A LL GMT P + +NA+I +V+ G + +A + + +M M I + +TYTSL
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 290 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 349
I+ G + RQ+ + P + +LI + KC K+ A ++F +M
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPD----VVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 350 VRDL----VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGE 401
+ L +++ ++ G+ + A+ +F + R N+ T+ V++ L +G +
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 402 ESLKLFNQMK 411
++L +F M+
Sbjct: 405 KALMIFEDMQ 414
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 169/382 (44%), Gaps = 43/382 (11%)
Query: 24 ARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLS 79
A ++ ++ G + ++ +ID CK+ ++ YA LFD+ N PD+ T+L++
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 80 AYSAAGNVKLAEKLFNA-TPVTLR-DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAP 137
+G + A+ L T ++ D I++NA++ A+ A +L+ M R AP
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 138 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVE 195
+ F++++++ + + Q + K C P V+ +L++ + C
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKG---CFPDVVAYTSLINGFCKCKK----- 332
Query: 196 SPVLMASARKLFDEAPLSQK----DEPSWTTMIAGYVRNDDLASARKLLDGMTH----PI 247
+ A K+F E +SQK + ++TT+I G+ + A+++ M P
Sbjct: 333 ----VDDAMKIFYE--MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 248 AVAWNAMISGYVRHGLYEEA---FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 304
+N ++ +G ++A F+ +K G+ + +TY L+ GL G+
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH-----GLCYNGKL 441
Query: 305 LHAYVLRTVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAI 359
A ++ ++ E + +I K GK+ A +F +P + ++V++ +
Sbjct: 442 EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTM 501
Query: 360 LSGYINARRLEEAKFIFREVPE 381
+SG EA +FR++ E
Sbjct: 502 ISGLFREGLKHEAHVLFRKMKE 523
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 125/264 (47%), Gaps = 28/264 (10%)
Query: 163 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 222
H + WG+ S N L+ +C A + +LM + P DE ++TT
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKA-LCRAHQ--LRPAILMLEDMPSYGLVP----DEKTFTT 229
Query: 223 MIAGYVRNDDLASARKLLDGMTHPIAVAW-----NAMISGYVRHGLYEEAFDTFRKMHSM 277
++ GY+ DL A ++ + M +W N ++ G+ + G E+A + ++M +
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVE-FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 278 -GIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYTKC 335
G D+YT+ +L++ GL G HA ++ ++Q + N++I+ K
Sbjct: 289 DGFFPDQYTFNTLVN-----GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 336 GKLVQAREVFDKMPVRDL----VSWNAILSGYINARRLEEAKFIFREVPERNLL----TW 387
G++ +A EV D+M RD V++N ++S ++EEA + R + + +L T+
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 388 TVMISGLAESGFGEESLKLFNQMK 411
+I GL + +++LF +M+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMR 427
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 169/411 (41%), Gaps = 74/411 (18%)
Query: 23 LARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLL 78
L HA + G + N LI C++ + A + + P+ PD + TT++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 79 SAYSAAGNVKLAEKL------FNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRM-K 131
Y G++ A ++ F + +S N +V + A+ M
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCS----WSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
+DGF PD ++F+T++ + C+ H VK + +++ +L
Sbjct: 288 QDGFFPDQYTFNTLVNGL---------CKAGH---VKHAI----EIMDVML--------- 322
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPI 247
++ +D D ++ ++I+G + ++ A ++LD M P
Sbjct: 323 ------------QEGYD------PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
V +N +IS + EEA + R + S GI D T+ SLI T +L
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSWNAILSGY 363
+ +P E N LI GKL +A + +M + R ++++N ++ G+
Sbjct: 425 EMRSKGCEPDEF----TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 364 INARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQM 410
A + EA+ IF E+ RN +T+ +I GL +S E++ +L +QM
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 173/403 (42%), Gaps = 42/403 (10%)
Query: 31 ILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSAAGN 86
+L G+ N +I CK + A + D + +P+ + TL+S
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 87 VKLAEKLFNA--TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFST 144
V+ A +L + L D ++N++++ + A++LF M+ G PD F+++
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 145 VLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYICCASSTLVESPVLMAS 202
++ ++ + + L + C SV+ NTL+ + C A+ T
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSG---CARSVITYNTLIDGF-CKANKT--------RE 488
Query: 203 ARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMIS 256
A ++FDE + ++ ++ T+I G ++ + A +L+D M P +N++++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 257 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR-QLHAYVLRTVVQ 315
+ R G ++A D + M S G + D TY +LIS GL GR ++ + +LR++
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS-----GLCKAGRVEVASKLLRSIQM 603
Query: 316 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-----DLVSWNAILSGYINARR-L 369
+ N +I + K +A +F +M + D VS+ + G N +
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 370 EEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFN 408
EA E+ E+ + + ++ GL E +KL N
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 148/351 (42%), Gaps = 51/351 (14%)
Query: 103 DTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL 162
D ++N +V A+++ M ++G+ PD +++++V+ + + E + + L
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 163 HCDVVKWGVMCVPSVL--NTLLSCYIC------------------------CASSTLVES 196
+ + C P+ + NTL+S +C C ++L++
Sbjct: 354 DQMITRD---CSPNTVTYNTLIST-LCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 197 PVLMASAR---KLFDE--APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP----I 247
L + R +LF+E + + DE ++ +I L A +L M
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 248 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 307
+ +N +I G+ + EA + F +M G+ + TY +LI + QL
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 308 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGY 363
++ +P ++ N+L+T + + G + +A ++ M D+V++ ++SG
Sbjct: 530 QMIMEGQKPDKY----TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 364 INARRLEEAKFIFREVPERNL-LT---WTVMISGLAESGFGEESLKLFNQM 410
A R+E A + R + + + LT + +I GL E++ LF +M
Sbjct: 586 CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 178/421 (42%), Gaps = 71/421 (16%)
Query: 46 LIDIYCKSSNIPYAHHLF----DKTPNPDIFSRTTLLSAYSAAGNVKLAEKLFNAT---P 98
LI+ +CK + A LF + PD+ + +TL+ Y AG + + KLF+
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 99 VTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWH 158
V L D + +++ + Y + D A ++ RM G +P+ +++ ++ + +
Sbjct: 352 VKL-DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI-YE 409
Query: 159 CQQLHCDVVKWG----VMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQ 214
++ ++K G ++ S+++ C + L E + M
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP----------- 458
Query: 215 KDEPSWTTMIAGYVRNDDLASAR----KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 270
D + ++ G + + A K+L V +N++I G+ R ++EA
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 271 FRKMHSMGIQMDEYTYTSLISASFNTG-----------LFNCGRQLHAYVLRTVV----- 314
FR M GI+ D T+T+++ S G +F G + A T++
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 315 --QPSEHFIL-------------SVNNALITFYTKCGKLVQAREVFDKM------PVRDL 353
+P+ L +V N +I KC ++ A + F+ + P D+
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP--DI 636
Query: 354 VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQ 409
V++N ++ GY + RRL+EA+ IF + N +T T++I L ++ + ++++F+
Sbjct: 637 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 696
Query: 410 M 410
M
Sbjct: 697 M 697
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 239 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 298
+LD P V + +I+G+ + G + AFD F+ M GI+ D Y++LI F G+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 299 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLV 354
G +L + L V+ + V ++ I Y K G L A V+ +M + ++V
Sbjct: 337 LGMGHKLFSQALHKGVKLD----VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 355 SWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++ ++ G R+ EA ++ ++ +R +++T++ +I G + G L+ M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 158/360 (43%), Gaps = 67/360 (18%)
Query: 68 NPDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLF 127
N I +T+L+ YS+ G+V A ++F+ TP ++ + + AM+ AY+ N + A++LF
Sbjct: 97 NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK-QNIVLWTAMISAYTENENSVEAIELF 155
Query: 128 VRMKRDGFAPDPFSFSTVLGAMSLIAE----EEWHCQQLHCDVVKWGVMCVPSVLNTLLS 183
RM+ + D + L A + + EE + + + K + ++ N+LL+
Sbjct: 156 KRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK---RKRRLAMDLTLRNSLLN 212
Query: 184 CYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM 243
Y+ + ARKLFDE+ +KD ++T+MI GY N
Sbjct: 213 MYVKSGET---------EKARKLFDES--MRKDVTTYTSMIFGYALN------------- 248
Query: 244 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD------EYTYTSLISASFNTG 297
G +E+ + F+KM ++ D + T+ ++ A ++G
Sbjct: 249 ------------------GQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSG 290
Query: 298 LFNCG-RQLHAYVLRTVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLV 354
L G R + ++ ++P E HF ++ + + G L A E ++MP++ + V
Sbjct: 291 LVEEGKRHFKSMIMDYNLKPREAHF-----GCMVDLFCRSGHLKDAHEFINQMPIKPNTV 345
Query: 355 SWNAILSG---YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
W +L + N EE + E+ ++ + + + A G +E K+ ++++
Sbjct: 346 IWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVR 405
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 219 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 278
S T +I Y + L + ++ + + V+WNA++SG++R+G +EA F M+
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 279 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 338
+++ E+T +S++ + + G+Q+HA V VV + +L A+I+FY+ G +
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMV---VVTGRDLVVL--GTAMISFYSSVGLI 235
Query: 339 VQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIF-REVPERNLLT 386
+A +V++ + V D V N+++SG I R +EA + R+ P +L+
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLS 285
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 137/340 (40%), Gaps = 87/340 (25%)
Query: 72 FSRTTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMK 131
S+T L+ YS G++ + ++F + V +D +S+NA++ + N G A+ +F M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFES--VEEKDLVSWNALLSGFLRNGKGKEALGVFAAMY 177
Query: 132 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 191
R+ F+ S+V+ + + + +Q+H VV G
Sbjct: 178 RERVEISEFTLSSVVKTCASLKILQ-QGKQVHAMVVVTG--------------------- 215
Query: 192 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM-THPIAVA 250
V++ +A MI+ Y + A K+ + + H V
Sbjct: 216 ---RDLVVLGTA-------------------MISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 251 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 310
N++ISG +R+ Y+EAF + +SL S N+ L+ G+Q+H L
Sbjct: 254 LNSLISGCIRNRNYKEAFLLMSRQRPN----VRVLSSSLAGCSDNSDLW-IGKQIHCVAL 308
Query: 311 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 370
R N L+ Y KCG++VQAR
Sbjct: 309 RNGFVSDSKLC----NGLMDMYGKCGQIVQART--------------------------- 337
Query: 371 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 410
IFR +P +++++WT MI A +G G ++L++F +M
Sbjct: 338 ----IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREM 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 260 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 319
R G + F ++H + +T+T ++ A GRQ+HA +++ Q +E
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIK---QGAET 117
Query: 320 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF--- 376
+S ALI Y+K G LV + VF+ + +DLVSWNA+LSG++ + +EA +F
Sbjct: 118 GTIS-KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAM 176
Query: 377 -REVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 411
RE E + T + ++ A SLK+ Q K
Sbjct: 177 YRERVEISEFTLSSVVKTCA-------SLKILQQGK 205
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 75 TTLLSAYSAAGNVKLAEKLFNATPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDG 134
T ++S YS+ G + A K++N+ V D + N+++ N + A L R +
Sbjct: 223 TAMISFYSSVGLINEAMKVYNSLNVH-TDEVMLNSLISGCIRNRNYKEAFLLMSRQR--- 278
Query: 135 FAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 194
P+ S+ L S + W +Q+HC ++ G + + N L+ Y C
Sbjct: 279 --PNVRVLSSSLAGCS-DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQ---- 331
Query: 195 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH------PIA 248
+ AR +F P K SWT+MI Y N D A ++ M P +
Sbjct: 332 -----IVQARTIFRAIP--SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 249 VAWNAMISGYVRHGLYEEAFDTFRKM 274
V + +IS GL +E + F M
Sbjct: 385 VTFLVVISACAHAGLVKEGKECFGMM 410
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 148/317 (46%), Gaps = 26/317 (8%)
Query: 107 YNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQL-HCD 165
Y +++ H++ + A+ LF M P FS +L A++ + + E H +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 166 VVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIA 225
++ G+ TL+ C+ CA +L S + KL E + ++ +++
Sbjct: 107 ML--GISHDLYSFTTLIDCFCRCARLSLALS--CLGKMMKLGFEPSI-----VTFGSLVN 157
Query: 226 GYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 281
G+ + A L+D + P V +N +I G A D + M MGI+
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
Query: 282 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 341
D TY SLI+ F++G + ++ + ++R + P + +ALI Y K G+L++A
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD----VITFSALIDVYGKEGQLLEA 273
Query: 342 REVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISG 393
++ +++M R ++V++N++++G L+EAK + + + N +T+ +I+G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 394 LAESGFGEESLKLFNQM 410
++ ++ +K+ M
Sbjct: 334 YCKAKRVDDGMKILCVM 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 181/421 (42%), Gaps = 38/421 (9%)
Query: 11 LAQLNHPSATQTLARAIHAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFDKTPN-- 68
+A+LN A +L R H +L L LID +C+ + + A K
Sbjct: 89 IAKLNKYEAVISLFR--HLEMLGISHDLYSF--TTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 69 --PDIFSRTTLLSAYSAAGNVKLAEKLFNATPVTLR---DTISYNAMVKAYSHNLDGHAA 123
P I + +L++ + A L + V L + + YN ++ + + A
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI-VGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 124 VKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSVLNTLL 182
+ + MK+ G PD ++++++ L W ++ D+++ G+ + L+
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLI--TRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 183 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARKL 239
Y L+E A+K ++E + + P ++ ++I G + L A+K+
Sbjct: 262 DVY--GKEGQLLE-------AKKQYNEM-IQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 240 LDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 295
L+ + P AV +N +I+GY + ++ M G+ D +TY +L
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 296 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK-LVQAREVFDKMPVRDLV 354
G F+ ++ ++ V P + + + L + K GK LV+ ++ V ++
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD-HGKIGKALVRLEDLQKSKTVVGII 430
Query: 355 SWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQM 410
++N I+ G A ++E+A ++F + + +++T+ M+ GL E+ +L+ +M
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 411 K 411
+
Sbjct: 491 Q 491
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 168/393 (42%), Gaps = 68/393 (17%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDKTPN----PDIFSRTTLLSAYSAAGNVKLAEKLFNATP- 98
N +I+ C+ S A + K PD+ + ++L++ + GN ++F+A
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF-CQGN-----RVFDAIDL 161
Query: 99 VTLRDTISYNAMVKAYSHNLDG-------HAAVKLFVRMKRDGFAPDPFSFSTVLGAMSL 151
V+ + + + V Y+ +DG + AV+LF RM+RDG D ++++++ L
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG--L 219
Query: 152 IAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEA 210
W +L D+V + VP+V+ + E A KL++E
Sbjct: 220 CCSGRWSDAARLMRDMVMRDI--VPNVITFTAVIDVFVKEGKFSE-------AMKLYEEM 270
Query: 211 PLSQKDEPSWT--TMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLY 264
D +T ++I G + + A+++LD M P V +N +I+G+ +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 265 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL------------------- 305
+E FR+M G+ D TY ++I F G + +++
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYG 390
Query: 306 --------HAYVLRTVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVR----D 352
A VL +Q SE ++ N +I K G + A ++F + + D
Sbjct: 391 LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 353 LVSWNAILSGYINARRLEEAKFIFREVPERNLL 385
+VS+ ++SG+ R+ +++ ++R++ E LL
Sbjct: 451 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
Query: 214 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFD 269
+ D + +++I G+ + + + A L+ M P V +N +I G + GL +A +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 270 TFRKMHSMGIQMDEYTYTSLISASFNTGLF-NCGRQLHAYVLRTVVQPSEHFILSVNNAL 328
F +M G++ D TY SL++ +G + + R + V+R +V F A+
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF-----TAV 250
Query: 329 ITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER-- 382
I + K GK +A +++++M R D+ ++N++++G R++EAK + + +
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 383 --NLLTWTVMISGLAESGFGEESLKLFNQM 410
+++T+ +I+G +S +E KLF +M
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 169/400 (42%), Gaps = 66/400 (16%)
Query: 28 HAHILTTGFRLTPLIRNRLIDIYCKSSNIPYAHHLFD----KTPNPDIFSRTTLLSAYSA 83
H + GFR T +++ + C+S N + HL + K NPD+ T L+ +
Sbjct: 79 QQHSQSLGFRDTQMLK--IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFT 136
Query: 84 AGNVKLAEKLFNA-TPVTLRDTISYNAMVKAYSHNLDGHAAVKLFVRMKRDGFAPDPFSF 142
N+ A ++ D +YNA++ + A ++ RM+ F+PD ++
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 143 STVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMAS 202
+ ++G++ C + D+ VLN LLS T++ +L+ +
Sbjct: 197 NIMIGSL---------CSRGKLDLAL-------KVLNQLLSDN---CQPTVITYTILIEA 237
Query: 203 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGY 258
TM+ G V A KL+D M P +N +I G
Sbjct: 238 -------------------TMLEGGV-----DEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
+ G+ + AF+ R + G + D +Y L+ A N G + G +L + P+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN- 332
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEA-K 373
+ + LIT + GK+ +A + M + D S++ +++ + RL+ A +
Sbjct: 333 ---VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 374 FIFREVPER---NLLTWTVMISGLAESGFGEESLKLFNQM 410
F+ + + +++ + +++ L ++G +++L++F ++
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 26/243 (10%)
Query: 62 LFDKTPNPDIFSRTTLLSAYSAAGNVKLAEKLF------NATPVTLRDTISYNAMVKAYS 115
+F + +P++ + + L++ G ++ A L TP D SY+ ++ A+
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP----DAYSYDPLIAAFC 379
Query: 116 HNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP 175
A++ M DG PD +++TVL + + + Q L V C P
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD---QALEIFGKLGEVGCSP 436
Query: 176 --SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDL 233
S NT+ S +L + + DE ++ +MI+ R +
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGI-------DPDEITYNSMISCLCREGMV 489
Query: 234 ASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 289
A +LL M HP V +N ++ G+ + E+A + M G + +E TYT L
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 290 ISA 292
I
Sbjct: 550 IEG 552
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 56/400 (14%)
Query: 44 NRLIDIYCKSSNIPYAHHLFDK------TPNPDIFSRTTLLSAYSAAGNVKLAEKLF--- 94
N LID Y + A L+ + P D ++ L+ AY AG ++ AE +
Sbjct: 181 NLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYA--LLIKAYCMAGLIERAEVVLVEM 238
Query: 95 ---NATPVTLRDTISYNAMVKAY-SHNLDGHAAVKLFVRMKRDGFAPDPFSFSTVLGAMS 150
+ +P T+ T+ YNA ++ + A+ +F RMKRD P +++ ++
Sbjct: 239 QNHHVSPKTIGVTV-YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYG 297
Query: 151 LIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES---PVLMASARKLF 207
A + + +L+C++ C P++ C + LV + L A ++F
Sbjct: 298 K-ASKSYMSWKLYCEMRSH--QCKPNI----------CTYTALVNAFAREGLCEKAEEIF 344
Query: 208 DEAPLSQKD--EPS---WTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGY 258
++ Q+D EP + ++ Y R A ++ M H P ++N M+ Y
Sbjct: 345 EQL---QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 259 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 318
R GL+ +A F +M +GI ++ L+SA + + V+P +
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP-D 460
Query: 319 HFILSVNNALITFYTKCGKLVQAREVFDKMP----VRDLVSWNAILSGYINARRLEEAKF 374
F+L N+++ Y + G+ + ++ +M D+ ++N +++ Y A LE +
Sbjct: 461 TFVL---NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 517
Query: 375 IFREVPERN----LLTWTVMISGLAESGFGEESLKLFNQM 410
+F E+ E+N ++TWT I + + L++F +M
Sbjct: 518 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557