Miyakogusa Predicted Gene
- Lj6g3v0061030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0061030.1 Non Chatacterized Hit- tr|I1LCF4|I1LCF4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.93,0,seg,NULL;
PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NULL; FAMI,CUFF.57464.1
(662 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 820 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 480 e-135
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 467 e-132
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 435 e-122
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 429 e-120
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 421 e-118
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 418 e-117
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 416 e-116
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 413 e-115
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 404 e-112
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 401 e-112
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 399 e-111
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 388 e-108
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 388 e-108
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 387 e-107
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 386 e-107
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 383 e-106
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 382 e-106
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 380 e-105
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 379 e-105
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 377 e-104
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 369 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 365 e-101
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 362 e-100
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 360 2e-99
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 3e-99
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 359 4e-99
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 356 3e-98
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 4e-98
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 4e-98
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 6e-98
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 1e-97
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 351 1e-96
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 3e-96
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 343 3e-94
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 336 3e-92
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 329 5e-90
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 327 1e-89
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 326 3e-89
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 4e-88
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 6e-88
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 6e-87
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 9e-87
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 317 1e-86
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 313 3e-85
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 6e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 6e-84
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 307 2e-83
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 307 2e-83
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 4e-82
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 7e-82
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 301 8e-82
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 2e-81
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 8e-81
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 4e-79
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 292 5e-79
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 6e-78
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 9e-78
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 1e-77
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 288 1e-77
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 9e-77
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 6e-75
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 6e-74
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 2e-73
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 1e-72
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 4e-72
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 6e-72
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 267 1e-71
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 2e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 263 3e-70
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 261 1e-69
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 246 5e-65
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 6e-63
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 2e-61
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 6e-56
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 189 5e-48
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 7e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 3e-44
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 4e-37
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 139 7e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 3e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 116 6e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 112 6e-25
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 4e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 109 5e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 8e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 4e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 94 4e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 5e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 3e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 86 7e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 85 2e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 85 2e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 4e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 74 3e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 74 5e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 72 1e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 67 5e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 5e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 62 9e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 62 9e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 4e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 57 5e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 56 6e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 7e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/664 (59%), Positives = 499/664 (75%), Gaps = 14/664 (2%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
MK +GF PD F+F++VL ++L+A++E C Q H +K G + SV N L+S Y CA
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA- 119
SS P L+ SARK+FDE + +KDE SWTTM+ GYV+N +LL+GM +
Sbjct: 199 SS-----PSLLHSARKVFDE--ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
VA+NAMISGYV G Y+EA + R+M S GI++DE+TY S+I A GL G+Q+HAY
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
VLR E F +N+L++ Y KCGK +AR +F+KMP +DLVSWNA+LSGY+++
Sbjct: 312 VLR-----REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+ EAK IF+E+ E+N+L+W +MISGLAE+GFGEE LKLF+ MK EG EPCDYA++GAIK+
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
C VLG+ NGQQ H+Q++++G DSSLSAGNALITMYAKCGVV A VF TMP +DSVSW
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
NA+IAAL QHG G +A+ +YE+MLK+ I PDRIT LT+L+ACSHAGLV +G+ YFDSM T
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
Y + PG DHYARLIDLLCR+GKFS+A+ V ES+PF+P+A IWE+LL+GCR+HGN+ELGI
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
AA++LF L PE DGTY++LSNM+A G+W+EVARVRKLMR+RGVKKE CSWIE+E V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 540 HVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESE-HKEHALSTHSEKL 598
H FLVDD HPE AVY YL+ L EMR+LGY+PDT FVLHD+ES+ HKE L+THSEK+
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKI 726
Query: 599 AVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSC 658
AV +G++KLP G TIR+FKNLR CGDCHN F+F+S NGECSC
Sbjct: 727 AVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSC 786
Query: 659 GNYW 662
GN+W
Sbjct: 787 GNFW 790
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 247/525 (47%), Gaps = 66/525 (12%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 90
+ +H +++ +G +LN L+ Y C SS L AR+LFDE +S+ D+ +
Sbjct: 34 RAVHGNIITFGFQPRAHILNRLIDVY--CKSSEL-------NYARQLFDE--ISEPDKIA 82
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTHPI----AVAWNAMISGYVRHGLYEEAFDTFRKMH 146
TTM++GY + D+ AR + + P+ V +NAMI+G+ + A + F KM
Sbjct: 83 RTTMVSGYCASGDITLARGVFE--KAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 147 SMGIQMDEYTYTSLIS--ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
G + D +T+ S+++ A C Q HA L++ +I SV+NAL++ Y+
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQC-VQFHAAALKS----GAGYITSVSNALVSVYS 195
Query: 205 KCGK----LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER-NLLTWT 259
KC L AR+VFD++ +D SW +++GY+ + + + + + L+ +
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
MISG GF +E+L++ +M S G+E ++ Y I+AC G L G+Q+H+ V++
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA------------------ 361
D S N+L+++Y KCG A +F MP D VSWNA
Sbjct: 316 -EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 362 -------------MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
MI+ LA++G G + ++L+ M +E P F + +C+ G
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
GQ Y + G LI + + G EA++V +MP S W +L+A
Sbjct: 435 NGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAA 492
Query: 469 CRIHGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWDE 511
HG+ + E + + + P++ +L+ +H G D+
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC-SHAGLVDQ 536
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/674 (37%), Positives = 374/674 (55%), Gaps = 91/674 (13%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
ARKLFDE P ++D SW MI GYVRN +L AR+L + M +WN M+SGY ++G
Sbjct: 114 ARKLFDEMP--ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 134 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASF----------------NTGLFNCGRQLH 177
++A F +M + ++ ++ +L+SA N L + L
Sbjct: 172 CVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLG 227
Query: 178 AYVLRTVVQPSEHFILSVN-------NALITFYTKCGKL--------------------- 209
+V + + + F S+N N +IT Y + GK+
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 210 ----------VQAREVFDKMPVRDLVSWNAILSGYINARRLE------------------ 241
+ARE+FDKMP R+ VSWNA+L+GY+ R+E
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 242 -------------EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
EAK +F ++P+R+ ++W MI+G ++SG E+L+LF QM+ EG
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
+++ A+ C + +L+ G+Q+H ++++ G+++ GNAL+ MY KCG + A+ +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
M D VSWN MIA ++HG G A++ +E M +E + PD T + +LSACSH GLV
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+G+ YF +M YG+ P HYA ++DLL RAG +A + ++MPFEP A IW +LL
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 469 CRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEP 528
R+HGN EL AA+++F + PE G Y++LSN+YA G+W +V ++R MR++GVKK P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 529 GCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKE 588
G SWIEI+N H F V D HPE ++ +LE+L + M+K GY+ T VLHD+E E KE
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKE 707
Query: 589 HALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXX 648
+ HSE+LAV YGI+++ G IRV KNLR+C DCHNA K++++
Sbjct: 708 RMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRF 767
Query: 649 XXXXNGECSCGNYW 662
+G CSCG+YW
Sbjct: 768 HHFKDGSCSCGDYW 781
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 220/477 (46%), Gaps = 63/477 (13%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF---- 142
D W I+ Y+R A ++ M +V++N MISGY+R+G +E A F
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 143 -----------------------RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ---- 175
R++ + + D ++ +++S G + R
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 176 ------------LHAYVLRTVVQPS-------EHFILSVNNALITFYTKCGKLVQAREVF 216
L AYV + ++ + E++ L N L+ + K K+V+AR+ F
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D M VRD+VSWN I++GY + +++EA+ +F E P +++ TWT M+SG ++ EE+ +
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
LF++M + AG ++ ++ ++ + ++S N +IT YA
Sbjct: 303 LFDKMPERNEVSWNAMLAGYVQG--------ERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
+CG + A +F MP D VSW AMIA +Q G +A++L+ QM +E +R +F +
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
LS C+ ++ G+ + G G L+ + C+ G EA + + M +
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 457 PSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWDE 511
W +++AG HG E+ ++ E + L P+ D T + + + +H G D+
Sbjct: 474 DIVS-WNTMIAGYSRHGFGEVALRFFESMKREGLKPD-DATMVAVLSACSHTGLVDK 528
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 27/329 (8%)
Query: 197 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
N I+ Y + G+ +A VF +MP VS+N ++SGY+ E A+ +F E+PER+L+
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
+W VMI G + ++ +LF M + + +G + G +D+ + + ++
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN----GCVDDARSVFDRM 183
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
+ +D S NAL++ Y + + A M+F + VSWN ++ + + V+A
Sbjct: 184 PE-KNDVSW---NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED--HYARLI 434
Q ++ M D+ +++ TI++ + +G + E + FD +P +D + ++
Sbjct: 240 QFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMV 288
Query: 435 DLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD- 493
+ EA+++ + MP E + W ++LAG +E+ A+ LF++ P ++
Sbjct: 289 SGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEM----AKELFDVMPCRNV 343
Query: 494 GTYIILSNMYAHLGKWDEVARVRKLMRER 522
T+ + YA GK E + M +R
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKR 372
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/666 (39%), Positives = 379/666 (56%), Gaps = 20/666 (3%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M ++G P F+ + VL +++ E +++H +VK G+ SV N+LL+ Y C
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCME-TGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
P++ A+ +FD + +D SW MIA +++ + A + M V
Sbjct: 196 D------PMM---AKFVFDRMVV--RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
WN+MISG+ + G A D F KM + D +T S++SA N G+Q+H++
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV--SWNAILSGYINA 237
++ T S V NALI+ Y++CG + AR + ++ +DL + A+L GYI
Sbjct: 305 IVTTGFDISG----IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
+ +AK IF + +R+++ WT MI G + G E++ LF M G P Y A +
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF-LTMPYVDS 356
L SL +G+QIH ++ G S+S NALITMYAK G + A F L D+
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
VSW +MI ALAQHG +A++L+E ML E + PD IT++ + SAC+HAGLV +G+ YFD
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
M + P HYA ++DL RAG EA++ E MP EP W SLL+ CR+H NI+
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
LG AAERL L PE G Y L+N+Y+ GKW+E A++RK M++ VKKE G SWIE++
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSE 596
+ VHVF V+D HPE + +Y ++++ E++K+GY+PDT VLHD+E E KE L HSE
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720
Query: 597 KLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGEC 656
KLA+ +G++ P T+R+ KNLR+C DCH A KFISK +G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780
Query: 657 SCGNYW 662
SC +YW
Sbjct: 781 SCRDYW 786
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/569 (27%), Positives = 269/569 (47%), Gaps = 82/569 (14%)
Query: 7 APDPFSFSTVLGAMSLIAEE-------EWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
AP P S ST+L + + ++ + Q +HC V+K G+M ++N L++ Y
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
+ ARKLFDE PL + SW T+++ Y + D+ S + D + +
Sbjct: 63 GYAL---------HARKLFDEMPL--RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDS 111
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
V+W MI GY G Y +A M GI+ ++T T+++++ T G+++H++
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+++ ++ + +SV+N+L+ Y KCG + A+ VFD+M VRD+ SWNA+++ ++ +
Sbjct: 172 IVKLGLRGN----VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 227
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIK 298
++ A F ++ ER+++TW MISG + G+ +L +F++M + L P + A +
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV----------------- 341
AC L L G+QIHS ++ G D S NALI+MY++CG V
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 347
Query: 342 --------GY--------ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
GY A +F+++ D V+W AMI QHG +AI L+ M+
Sbjct: 348 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 386 DILPDRITFLTILSACS-----------HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLI 434
P+ T +LS S H VK G+ Y S+ LI
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN------------ALI 455
Query: 435 DLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF--ELTPEQ 492
+ +AG + A + + + E W S++ HG+ E ++ E + L P+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 493 DGTYIILSNMYAHLGKWDEVARVRKLMRE 521
TY+ + + H G ++ + +M++
Sbjct: 516 I-TYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 177/373 (47%), Gaps = 17/373 (4%)
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
T+L+ S N + GR V V++ F + + N L+ Y+K G + AR++FD
Sbjct: 17 TNLLQKSVNK---SNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFD 73
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+MP+R SWN +LS Y ++ F ++P+R+ ++WT MI G G +++++
Sbjct: 74 EMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV 133
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
M EG+EP + + + ++ G+++HS +++LG ++S N+L+ MYAK
Sbjct: 134 MGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG A VF M D SWNAMIA Q G+ A+ +EQM + DI +T+ ++
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSM 249
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE---SMP 454
+S + G F M ++P A ++ K K++ +
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 455 FEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD---GTYIILSNMYAHLGKWDE 511
F+ S + +L++ G G++ A RL E +D + L + Y LG ++
Sbjct: 310 FDISGIVLNALISMYSRCG----GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 512 VARVRKLMRERGV 524
+ +++R V
Sbjct: 366 AKNIFVSLKDRDV 378
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/600 (40%), Positives = 345/600 (57%), Gaps = 46/600 (7%)
Query: 64 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 123
+ + P M A +LFDE P + D S+ M++ YVRN + A+ D M A +WN
Sbjct: 102 ISKDPSRMMEAHQLFDEIP--EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
MI+GY R G E+A + F M ++ +E ++
Sbjct: 160 TMITGYARRGEMEKARELFYSM----MEKNEVSW-------------------------- 189
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 243
NA+I+ Y +CG L +A F PVR +V+W A+++GY+ A+++E A
Sbjct: 190 -------------NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 244 KFIFREVP-ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
+ +F+++ +NL+TW MISG E+ E+ LKLF M EG+ P + A+ C
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
L +L G+QIH V + + ++A +LI+MY KCG +G A +F M D V+WNAM
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM 356
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
I+ AQHG +A+ L+ +M+ I PD ITF+ +L AC+HAGLV G YF+SM Y
Sbjct: 357 ISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYK 416
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
+ P DHY ++DLL RAGK EA K+ SMPF P A ++ +LL CR+H N+EL AA
Sbjct: 417 VEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAA 476
Query: 483 ERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVF 542
E+L +L + Y+ L+N+YA +W++VARVRK M+E V K PG SWIEI N VH F
Sbjct: 477 EKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHF 536
Query: 543 LVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVY 602
D +HPE+ +++K L++L +M+ GY P+ +F LH++E E KE L HSEKLAV +
Sbjct: 537 RSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAF 596
Query: 603 GILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
G +KLP G+ I+VFKNLR+CGDCH A KFIS+ +G CSCG+YW
Sbjct: 597 GCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 136/326 (41%), Gaps = 43/326 (13%)
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG---------- 233
+ +PS+ + N +I + G + A VF M ++ ++WN++L G
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 234 ----------------------YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
Y+ E+A+ F +P ++ +W MI+G A G
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E++ +LF M +E + ++ I G L+ S ++ + A A+
Sbjct: 172 EKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAM 223
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDS-VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
IT Y K V A+ +F M + V+WNAMI+ ++ R ++L+ ML+E I P+
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+ L CS ++ G+ + + + LI + C+ G+ +A K+
Sbjct: 284 SSGLSSALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIE 476
E M + W ++++G HGN +
Sbjct: 343 EVMK-KKDVVAWNAMISGYAQHGNAD 367
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/611 (36%), Positives = 343/611 (56%), Gaps = 46/611 (7%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
++ Y D+ASARK+ D + + N MI YV +G Y E F M ++ D
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
YT+ ++ A +G GR++H + + + L V N L++ Y KCG L +AR
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST----LFVGNGLVSMYGKCGFLSEAR 195
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEA------------------------------ 243
V D+M RD+VSWN+++ GY +R ++A
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 244 -------KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
K +F ++ +++L++W VMI ++ E+++L+++M+++G EP +
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
+ ACG +L G++IH + + +L NALI MYAKCG + A VF M D
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
VSW AMI+A GRG A+ L+ ++ ++PD I F+T L+ACSHAGL++EG+ F
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
M HY +TP +H A ++DLL RAGK EA + + M EP+ +W +LL CR+H + +
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
+G+ AA++LF+L PEQ G Y++LSN+YA G+W+EV +R +M+ +G+KK PG S +E+
Sbjct: 496 IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSE 596
++H FLV D HP+ +Y+ L+ LV +M++LGY+PD++ LHD+E E KE L+ HSE
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSE 615
Query: 597 KLAVVYGILKLP-----LGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXX 651
KLA+V+ ++ TIR+ KNLR+CGDCH A K IS+
Sbjct: 616 KLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVF 675
Query: 652 XNGECSCGNYW 662
G CSCG+YW
Sbjct: 676 RFGVCSCGDYW 686
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 310 QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQH 369
+ +HS++I + S G L+ YA V A VF +P + + N MI + +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDH 429
G + ++++ M ++ PD TF +L ACS +G + G+ S T G++
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS-ATKVGLSSTLFV 177
Query: 430 YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
L+ + + G SEA+ V + M W SL+ G
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVS-WNSLVVG 215
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/634 (36%), Positives = 351/634 (55%), Gaps = 51/634 (8%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCY--ICCASSTLVESPVLMASARKLFDEAPLSQKDE 88
+Q+H V+K G V + LL Y + C S A+K+F L ++
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD-----------AKKVF--YGLDDRNT 205
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 148
+ +++ G + + A +L GM +V+W AMI G ++GL +EA + FR+M
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKD-SVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
G++MD+Y + S++ A G N G+Q+HA ++RT Q +H + V +ALI Y KC
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ--DH--IYVGSALIDMYCKC-- 318
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+ L AK +F + ++N+++WT M+ G ++
Sbjct: 319 -----------------------------KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
G EE++K+F M+ G++P Y AI AC + SL+ G Q H + I G ++
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
N+L+T+Y KCG + + +F M D+VSW AM++A AQ GR V+ IQL+++M++ +
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
PD +T ++SACS AGLV++GQ YF M + YG+ P HY+ +IDL R+G+ EA +
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
MPF P A W +LL+ CR GN+E+G AAE L EL P Y +LS++YA GK
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Query: 509 WDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
WD VA++R+ MRE+ VKKEPG SWI+ + +H F DD P + +Y LE+L ++
Sbjct: 590 WDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIID 649
Query: 569 LGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNA 628
GY PDT FV HD+E K L+ HSE+LA+ +G++ +P G IRV KNLR+C DCHNA
Sbjct: 650 NGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNA 709
Query: 629 FKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K IS +G CSCG++W
Sbjct: 710 TKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 217/441 (49%), Gaps = 21/441 (4%)
Query: 62 STLVESPVLMAS---ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
+ +V + LM S AR++FD P Q + SW ++ Y + ++ + +
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIP--QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRD 102
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRK-MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 177
V WN +I GY GL A + M + T +++ S + G + G+Q+H
Sbjct: 103 GVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIH 162
Query: 178 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
V++ E ++L V + L+ Y G + A++VF + R+ V +N+++ G +
Sbjct: 163 GQVIKLGF---ESYLL-VGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
+E+A +FR + E++ ++W MI GLA++G +E+++ F +MK +GL+ Y + +
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
ACG LG+++ G+QIH+ +I+ + G+ALI MY KC + YA VF M + V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
SW AM+ Q GR +A++++ M + I PD T +SAC++ ++EG +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK- 396
Query: 418 CTHYGMTPGEDHYA----RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
+T G HY L+ L + G ++ ++ M A W ++++ G
Sbjct: 397 ----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFG 451
Query: 474 NIELGIQAAERLFELTPEQDG 494
IQ +++ + + DG
Sbjct: 452 RAVETIQLFDKMVQHGLKPDG 472
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 43/341 (12%)
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
+ +H ++R + P E F+ N ++ Y AR VFD++P +L SWN +L
Sbjct: 26 KMIHGNIIRALPYP-ETFLY---NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLA 81
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYA 292
Y A + E + F ++P+R+ +TW V+I G + SG ++K +N M +
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVT 141
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFL--- 349
+K G + G+QIH QVI+LG +S L G+ L+ MYA G + A VF
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 350 ---TMPY------------------------VDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
T+ Y DSVSW AMI LAQ+G +AI+ + +M
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 383 LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY---ARLIDLLCR 439
+ + D+ F ++L AC G + EG+ + T +DH + LID+ C+
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR----TNFQDHIYVGSALIDMYCK 317
Query: 440 AGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
AK V + M + + W +++ G G E ++
Sbjct: 318 CKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVK 357
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/671 (35%), Positives = 354/671 (52%), Gaps = 57/671 (8%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
G PD + VL + + +QLHC V ++ V N L+ Y C
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKCG---- 278
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI----AV 120
+M A +F +S KD SW M+AGY + A +L + M V
Sbjct: 279 -----MMDEANTVFSN--MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
W+A ISGY + GL EA R+M S GI+ +E T S++S + G G+++H Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 181 ------LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 234
LR E+ ++ N LI Y KC K+ AR +FD + +
Sbjct: 392 IKYPIDLRKNGHGDENMVI---NQLIDMYAKCKKVDTARAMFDSLSPK------------ 436
Query: 235 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE--PCDYA 292
ER+++TWTVMI G ++ G ++L+L ++M E + P +
Sbjct: 437 -----------------ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDS-SLSAGNALITMYAKCGVVGYADMVFLTM 351
+ A+ AC L +L G+QIH+ ++ ++ L N LI MYAKCG + A +VF M
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
+ V+W +++ HG G +A+ ++++M + D +T L +L ACSH+G++ +G
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
YF+ M T +G++PG +HYA L+DLL RAG+ + A ++ E MP EP +W + L+ CRI
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 472 HGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
HG +ELG AAE++ EL DG+Y +LSN+YA+ G+W +V R+R LMR +GVKK PGCS
Sbjct: 660 HGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCS 719
Query: 532 WIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHAL 591
W+E F V D HP +Y+ L + ++ +GY+P+T F LHD++ E K+ L
Sbjct: 720 WVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLL 779
Query: 592 STHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXX 651
HSEKLA+ YGIL P GA IR+ KNLR+CGDCH AF ++S+
Sbjct: 780 FEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHF 839
Query: 652 XNGECSCGNYW 662
NG CSC YW
Sbjct: 840 KNGSCSCKGYW 850
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 219/442 (49%), Gaps = 32/442 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGI 150
++A Y R L+ ARK+ D M+ V+WN++I Y + G + A + F +M + G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ D T +++ + G + G+QLH + + + + + + V N L+ Y KCG +
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN----MFVGNCLVDMYAKCGMMD 281
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLA 266
+A VF M V+D+VSWNA+++GY R E+A +F ++ E +++TW+ ISG A
Sbjct: 282 EANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL------- 319
+ G G E+L + QM S G++P + + C +G+L +G++IH I+
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKN 401
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVF--LTMPYVDSVSWNAMIAALAQHGRGVQAIQ 377
GH N LI MYAKC V A +F L+ D V+W MI +QHG +A++
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 378 LYEQMLKED--ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR--- 432
L +M +ED P+ T L AC+ ++ G+ Y + ++
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA-----YALRNQQNAVPLFVS 516
Query: 433 --LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTP 490
LID+ + G S+A+ V ++M + W SL+ G +HG E + + + +
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 491 EQDG-TYIILSNMYAHLGKWDE 511
+ DG T +++ +H G D+
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQ 597
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 175/412 (42%), Gaps = 84/412 (20%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
WN++I Y +G + F MHS+ D YT+ + A CG HA L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 182 RTVVQPSEHFI--LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
T FI + V NAL+ Y++C L AR+VFD+M V D+VSWN+I+ Y
Sbjct: 155 VT------GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY----- 203
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIK 298
A+ G + +L++F++M +E G P + +
Sbjct: 204 --------------------------AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
C LG+ G+Q+H + ++ GN L+ MYAKCG++ A+ VF M D VS
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 359 WNAMIAALAQHGRGVQAIQLYE-----------------------------------QML 383
WNAM+A +Q GR A++L+E QML
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA-------RLIDL 436
I P+ +T +++LS C+ G + G+ Y + ++ + +LID+
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 437 LCRAGKFSEAKKVTESM-PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+ K A+ + +S+ P E W ++ G HG+ ++ +FE
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 54/319 (16%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS-------VLNTLL 53
M G P+ + +VL + + H +++HC +K+ + + V+N L+
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGAL-MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 54 SCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 113
Y C + +AR +FD ++D +WT MI GY ++ D A +LL
Sbjct: 415 DMYAKCKK---------VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
M +EE T + + +T + + A + G
Sbjct: 466 M--------------------FEEDCQT---------RPNAFTISCALVACASLAALRIG 496
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
+Q+HAY LR F V+N LI Y KCG + AR VFD M ++ V+W ++++G
Sbjct: 497 KQIHAYALRNQQNAVPLF---VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 234 YINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMKSE-GLEP 288
Y EEA IF E+ +T V++ + SG ++ ++ FN+MK+ G+ P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 289 CDYAYAGAIKACGVLGSLD 307
YA + G G L+
Sbjct: 614 GPEHYACLVDLLGRAGRLN 632
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/640 (34%), Positives = 358/640 (55%), Gaps = 23/640 (3%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 90
+Q+HC G+ V ++ Y+ C M ARK+FD +S KD +
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR---------MGDARKVFDR--MSDKDVVT 184
Query: 91 WTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
+ ++ Y R L ++L M V+WN ++SG+ R G ++EA F+K+H
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
+G D+ T +S++ + ++ + N GR +H YV++ + + I +A+I Y K
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI----SAMIDMYGKS 300
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR----EVPERNLLTWTVMI 262
G + +F++ + + NA ++G +++A +F + E N+++WT +I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
+G A++G E+L+LF +M+ G++P + ACG + +L +G+ H +++
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
++ G+ALI MYAKCG + + +VF MP + V WN+++ + HG+ + + ++E +
Sbjct: 421 DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Query: 383 LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGK 442
++ + PD I+F ++LSAC GL EG YF M YG+ P +HY+ +++LL RAGK
Sbjct: 481 MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGK 540
Query: 443 FSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNM 502
EA + + MPFEP + +W +LL CR+ N++L AAE+LF L PE GTY++LSN+
Sbjct: 541 LQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI 600
Query: 503 YAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
YA G W EV +R M G+KK PGCSWI+++N V+ L D HP++ + + ++++
Sbjct: 601 YAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEI 660
Query: 563 VIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMC 622
EMRK G+ P+ F LHD+E + +E L HSEKLAVV+G+L P G ++V KNLR+C
Sbjct: 661 SKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRIC 720
Query: 623 GDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
GDCH KFIS +G CSCG++W
Sbjct: 721 GDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 212/492 (43%), Gaps = 65/492 (13%)
Query: 84 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 143
+Q D +IA Y + A +L + P +++++I + L+ ++ F
Sbjct: 46 AQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFS 105
Query: 144 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
+M S G+ D + +L F G+Q+H + + V ++ Y
Sbjct: 106 RMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF----VQGSMFHMY 161
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWT 259
+CG++ AR+VFD+M +D+V+ +A+L Y LEE I E+ E N+++W
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWN 221
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
++SG SG+ +E++ +F ++ G P + + + G L+ G+ IH VI+
Sbjct: 222 GILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQ 281
Query: 320 GHDSSLSAGNALITMYAKCGVV----------------------------GYADMVFLTM 351
G +A+I MY K G V G D
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF 341
Query: 352 PY-------VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHA 404
++ VSW ++IA AQ+G+ ++A++L+ +M + P+ +T ++L AC +
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401
Query: 405 GLVKEGQ---------HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF 455
+ G+ H D++ H G + LID+ + G+ + ++ V MP
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNV--HVG--------SALIDMYAKCGRINLSQIVFNMMPT 451
Query: 456 EPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHLGKWDEVAR 514
+ + W SL+ G +HG + + E L + D ++ L + +G DE +
Sbjct: 452 K-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 515 VRKLMRER-GVK 525
K+M E G+K
Sbjct: 511 YFKMMSEEYGIK 522
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/562 (38%), Positives = 323/562 (57%), Gaps = 10/562 (1%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
AR + D M+H V WN MI Y R GL +EAF F +M + DE +++SA
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
TG R ++ +++ V+ H + AL+T Y G + ARE F KM VR+L
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLL----TALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL 286
A++SGY RL++A+ IF + +++L+ WT MIS ES + +E+L++F +M G+
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI 340
Query: 287 EPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADM 346
+P + I AC LG LD + +HS + G +S LS NALI MYAKCG +
Sbjct: 341 KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRD 400
Query: 347 VFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGL 406
VF MP + VSW++MI AL+ HG A+ L+ +M +E++ P+ +TF+ +L CSH+GL
Sbjct: 401 VFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460
Query: 407 VKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
V+EG+ F SM Y +TP +HY ++DL RA EA +V ESMP + IW SL+
Sbjct: 461 VEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLM 520
Query: 467 AGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
+ CRIHG +ELG AA+R+ EL P+ DG +++SN+YA +W++V +R++M E+ V K
Sbjct: 521 SACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFK 580
Query: 527 EPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEH 586
E G S I+ H FL+ D H + + +Y L+++V +++ GY+PD VL D+E E
Sbjct: 581 EKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEE 640
Query: 587 KEHALSTHSEKLAVVYGIL------KLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXX 640
K+ + HSEKLA+ +G++ + IR+ KNLR+C DCH FK +SK
Sbjct: 641 KKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREI 700
Query: 641 XXXXXXXXXXXXNGECSCGNYW 662
NG CSC +YW
Sbjct: 701 IVRDRTRFHCYKNGLCSCRDYW 722
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 39/302 (12%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
M AR+ F + +S ++ T M++GY + L A+ + D V W MIS YV
Sbjct: 263 MDMAREFFRK--MSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
+EA F +M GI+ D + S+ISA N G+ + + +H+ + ++
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE-- 378
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
LS+NNALI Y KCG L R+VF+KMP R++VSW++
Sbjct: 379 --LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS--------------------- 415
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
MI+ L+ G ++L LF +MK E +EP + + G + C G ++ G+
Sbjct: 416 ----------MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 311 QIHSQVI-QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQ 368
+I + + + L ++ ++ + ++ A V +MP +V W ++++A
Sbjct: 466 KIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 369 HG 370
HG
Sbjct: 526 HG 527
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 166/372 (44%), Gaps = 36/372 (9%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P ++ +N + R ++++ +G ++D++++ ++ A G +L
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 177 H--AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 234
H A+ + T+ P V + Y CG++ AR VFD+M RD+V+WN ++ Y
Sbjct: 134 HGVAFKIATLCDPF------VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 235 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY--- 291
++EA +F E+ + N++ +++ + S G +N+ E L D
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV-SACGRTGNMRYNRAIYEFLIENDVRMD 246
Query: 292 ---------AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG 342
YAGA G +D ++ ++ +L A+++ Y+KCG +
Sbjct: 247 THLLTALVTMYAGA-------GCMDMAREFFRKM----SVRNLFVSTAMVSGYSKCGRLD 295
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
A ++F D V W MI+A + +A++++E+M I PD ++ +++SAC+
Sbjct: 296 DAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACA 355
Query: 403 HAGLVKEGQHYFDSMCTHY-GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
+ G++ + + C H G+ LI++ + G + V E MP +
Sbjct: 356 NLGILDKAKWVHS--CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVS 412
Query: 462 WESLLAGCRIHG 473
W S++ +HG
Sbjct: 413 WSSMINALSMHG 424
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 246 IFREVPER-NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG 304
+F +P + + + L+ S ++ + +++ G +++ +KA +
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
+L G ++H ++ + MYA CG + YA VF M + D V+WN MI
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
+ G +A +L+E+M +++PD + I+SAC G ++ + ++
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/649 (35%), Positives = 351/649 (54%), Gaps = 70/649 (10%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
ARKLFDE P ++ SW +++GY++N ++ ARK+ D M V+W A++ GYV +G
Sbjct: 67 ARKLFDEMP--DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG 124
Query: 134 LYEEAFDTFRKM---------------------------HSMGIQMDEYTYTSLISASFN 166
+ A F KM + M D TS+I
Sbjct: 125 KVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
G + R++ + SE +++ ++T Y + ++ AR++FD MP + VS
Sbjct: 185 EGRVDEAREIFD-------EMSERSVITWT-TMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE------------------- 267
W ++L GY+ R+E+A+ +F +P + ++ MISGL +
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 268 ------------SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
+GF E+L LF M+ +G+ P + C L SL +G+Q+H+Q
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
+++ D + + L+TMY KCG + + ++F P D + WN++I+ A HG G +A
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 376 IQLYEQM-LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLI 434
++++ +M L P+ +TF+ LSACS+AG+V+EG ++SM + +G+ P HYA ++
Sbjct: 417 LKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMV 476
Query: 435 DLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG 494
D+L RAG+F+EA ++ +SM EP A +W SLL CR H +++ A++L E+ PE G
Sbjct: 477 DMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSG 536
Query: 495 TYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDD-AVHPEVH 553
TYI+LSNMYA G+W +VA +RKLM+ R V+K PGCSW E+EN VH F HPE
Sbjct: 537 TYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQE 596
Query: 554 AVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATI 613
++ K L++L +R+ GY PD + LHD++ E K ++L HSE+LAV Y +LKL G I
Sbjct: 597 SILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPI 656
Query: 614 RVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
RV KNLR+C DCH A K ISK NGECSC +YW
Sbjct: 657 RVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 154/332 (46%), Gaps = 62/332 (18%)
Query: 197 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
N IT ++ GK+ +AR++FD + + SWN++++GY +A+ +F E+P+RN++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
+W ++SG ++G +E+ K+F+ M
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMP---------------------------------- 106
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
+ ++ + AL+ Y G V A+ +F MP + VSW M+ Q GR A
Sbjct: 107 -----ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDAC 161
Query: 377 QLYEQMLKEDILPDR--ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLI 434
+LYE ++PD+ I +++ G V E + FD M +T + ++
Sbjct: 162 KLYE------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMV 210
Query: 435 DLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG 494
+ + +A+K+ + MP E + W S+L G +G IE AE LFE+ P +
Sbjct: 211 TGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIE----DAEELFEVMPVK-- 263
Query: 495 TYIILSNMYAHLGKWDEVARVRKL---MRERG 523
I + M + LG+ E+A+ R++ M+ER
Sbjct: 264 PVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 182/425 (42%), Gaps = 66/425 (15%)
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 148
P+ I R + ARKL D +WN+M++GY + + +A F
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF------ 71
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
DE ++IS N L++ Y K G+
Sbjct: 72 ----DEMPDRNIISW---------------------------------NGLVSGYMKNGE 94
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+ +AR+VFD MP R++VSW A++ GY++ +++ A+ +F ++PE+N ++WTVM+ G +
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD 154
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
G +++ KL+ + + + A I G +D ++I ++ + S+
Sbjct: 155 GRIDDACKLYEMIPDKD----NIARTSMIHGLCKEGRVDEAREIFDEM----SERSVITW 206
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
++T Y + V A +F MP VSW +M+ Q+GR A +L+E M + +
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV- 265
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
I ++S G + + + FDSM + + +I + R G EA
Sbjct: 266 ---IACNAMISGLGQKGEIAKARRVFDSMKER-----NDASWQTVIKIHERNGFELEALD 317
Query: 449 ---VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYI--ILSNMY 503
+ + P+ P S+L+ C ++ G Q +L + D Y+ +L MY
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD-VYVASVLMTMY 376
Query: 504 AHLGK 508
G+
Sbjct: 377 IKCGE 381
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/663 (36%), Positives = 358/663 (53%), Gaps = 55/663 (8%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
G P+ ++F VL + + ++ QQ+H V+K G V +L+S Y+
Sbjct: 129 GLLPNSYTFPFVLKSCAK-SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR--- 184
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 124
+ A K+FD++P +D S+T +I GY + +A+KL D + V+WNA
Sbjct: 185 ------LEDAHKVFDKSP--HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 125 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 184
MISGY G Y+EA + F+ M ++ DE T +++SA +G GRQ+H ++
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI---- 292
Query: 185 VQPSEHFI---LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+H L + NALI Y+KCG+L E
Sbjct: 293 ---DDHGFGSNLKIVNALIDLYSKCGEL-------------------------------E 318
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
A +F +P +++++W +I G +E+L LF +M G P D + AC
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 302 VLGSLDNGQQIHSQVIQL--GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
LG++D G+ IH + + G ++ S +LI MYAKCG + A VF ++ + SW
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
NAMI A HGR + L+ +M K I PD ITF+ +LSACSH+G++ G+H F +M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
Y MTP +HY +IDLL +G F EA+++ M EP IW SLL C++HGN+ELG
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
AE L ++ PE G+Y++LSN+YA G+W+EVA+ R L+ ++G+KK PGCS IEI+++V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 540 HVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLA 599
H F++ D HP +Y LE++ + + K G++PDT VL +ME E KE AL HSEKLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 600 VVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCG 659
+ +G++ G + + KNLR+C +CH A K ISK +G CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 660 NYW 662
+YW
Sbjct: 739 DYW 741
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 214/424 (50%), Gaps = 11/424 (2%)
Query: 102 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 161
+ L A + + P + WN M G+ A + M S+G+ + YT+ ++
Sbjct: 82 EGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
+ + F G+Q+H +VL+ L V+ +LI+ Y + G+L A +VFDK P
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCD----LDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
RD+VS+ A++ GY + +E A+ +F E+P +++++W MISG AE+G +E+L+LF M
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
+ P + + AC GS++ G+Q+H + G S+L NALI +Y+KCG +
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
A +F +PY D +SWN +I +A+ L+++ML+ P+ +T L+IL AC
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 402 SHAGLVKEGQH---YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
+H G + G+ Y D G+T LID+ + G A +V S+ S
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLK--GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKS 434
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHLGKWDEVARVRK 517
W +++ G +HG + R+ ++ + D T++ L + +H G D + +
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 518 LMRE 521
M +
Sbjct: 495 TMTQ 498
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 329/573 (57%), Gaps = 6/573 (1%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++I Y DL SA K+ + V+WN+MI+G+V+ G ++A + F+KM S ++
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
T ++SA GRQ+ +Y+ V + L++ NA++ YTKCG +
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN----LTLANAMLDMYTKCGSIED 285
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A+ +FD M +D V+W +L GY + E A+ + +P+++++ W +IS ++G
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 272 EESLKLFNQMK-SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E+L +F++++ + ++ + AC +G+L+ G+ IHS + + G + +A
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI MY+KCG + + VF ++ D W+AMI LA HG G +A+ ++ +M + ++ P+
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+TF + ACSH GLV E + F M ++YG+ P E HYA ++D+L R+G +A K
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
E+MP PS +W +LL C+IH N+ L A RL EL P DG +++LSN+YA LGKW+
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
V+ +RK MR G+KKEPGCS IEI+ M+H FL D HP VY L +++ +++ G
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
Query: 571 YIPDTKFVLHDMESEH-KEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAF 629
Y P+ VL +E E KE +L+ HSEKLA+ YG++ IRV KNLR+CGDCH+
Sbjct: 646 YEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVA 705
Query: 630 KFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K IS+ NG+CSC ++W
Sbjct: 706 KLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 203/444 (45%), Gaps = 75/444 (16%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLIS 162
L ARK+ D + P + AWN +I Y + F M S ++YT+ LI
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
A+ + G+ LH +++ V S+ F V N+LI Y CG L A +VF + +
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVG-SDVF---VANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
D+VSWN+ MI+G + G +++L+LF +M+
Sbjct: 196 DVVSWNS-------------------------------MINGFVQKGSPDKALELFKKME 224
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV- 341
SE ++ G + AC + +L+ G+Q+ S + + + +L+ NA++ MY KCG +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 342 ----------------------GY--------ADMVFLTMPYVDSVSWNAMIAALAQHGR 371
GY A V +MP D V+WNA+I+A Q+G+
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 372 GVQA-IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+A I +E L++++ ++IT ++ LSAC+ G ++ G+ + S +G+
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVT 403
Query: 431 ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTP 490
+ LI + + G ++++V S+ + +W +++ G +HG + ++ E
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANV 462
Query: 491 EQDGTYIILSNMY---AHLGKWDE 511
+ +G + +N++ +H G DE
Sbjct: 463 KPNG--VTFTNVFCACSHTGLVDE 484
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 144/269 (53%), Gaps = 21/269 (7%)
Query: 47 SVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLAS 106
++ N +L Y C S + A++LFD + +KD +WTTM+ GY ++D +
Sbjct: 268 TLANAMLDMYTKCGS---------IEDAKRLFD--AMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASF 165
AR++L+ M VAWNA+IS Y ++G EA F ++ +++++ T S +SA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 225
G GR +H+Y+ + ++ + H V +ALI Y+KCG L ++REVF+ + RD+
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFH----VTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 226 SWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQM 281
W+A++ G EA +F ++ E N+ +T+T + + +G +E+ LF+QM
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 282 KSE-GLEPCDYAYAGAIKACGVLGSLDNG 309
+S G+ P + YA + G G L+
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 338/621 (54%), Gaps = 49/621 (7%)
Query: 45 VPSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND 102
VP ++ N LL Y C S + ARK+FDE P +D SW M+ GY
Sbjct: 117 VPGIVIWNRLLRMYAKCGS---------LVDARKVFDEMP--NRDLCSWNVMVNGYAEVG 165
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLI 161
L ARKL D MT + +W AM++GYV+ EEA + M + + + +T + +
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
+A+ G+++H +++R + E + ++L+ Y KCG +
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDE----VLWSSLMDMYGKCGCI------------ 269
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
+EA+ IF ++ E+++++WT MI +S E LF+++
Sbjct: 270 -------------------DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
P +Y +AG + AC L + + G+Q+H + ++G D A ++L+ MY KCG +
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
A V P D VSW ++I AQ+G+ +A++ ++ +LK PD +TF+ +LSAC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
+HAGLV++G +F S+ + ++ DHY L+DLL R+G+F + K V MP +PS +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 462 WESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRE 521
W S+L GC +GNI+L +AA+ LF++ PE TY+ ++N+YA GKW+E ++RK M+E
Sbjct: 491 WASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQE 550
Query: 522 RGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHD 581
GV K PG SW EI+ HVF+ D HP + + ++L +L +M++ GY+P T VLHD
Sbjct: 551 IGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHD 610
Query: 582 MESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXX 641
+E E KE L HSEKLAV + IL G I+VFKNLR C DCH A KFIS
Sbjct: 611 VEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKIT 670
Query: 642 XXXXXXXXXXXNGECSCGNYW 662
NG+CSCG+YW
Sbjct: 671 VRDSTRFHCFENGQCSCGDYW 691
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%)
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
G++ L+ Q+ +P Y I+ C +L+ G+++H + G + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
L+ MYAKCG + A VF MP D SWN M+ A+ G +A +L+++M ++D
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD 181
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 351/653 (53%), Gaps = 83/653 (12%)
Query: 12 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 71
SF++V+ + + E + +QLHC VVK+G + ++ L+ Y C + M
Sbjct: 297 SFASVIKLCANLKELRF-TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA---------M 346
Query: 72 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 131
A +LF E G V N V+W AMISG+++
Sbjct: 347 LDALRLFKEI---------------GCVGN-----------------VVSWTAMISGFLQ 374
Query: 132 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 191
+ EEA D F +M G++ +E+TY+ +++A ++HA V++T + S
Sbjct: 375 NDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSS-- 428
Query: 192 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 251
+V AL+ Y K GK+ EEA +F +
Sbjct: 429 --TVGTALLDAYVKLGKV-------------------------------EEAAKVFSGID 455
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVL-GSLDNGQ 310
+++++ W+ M++G A++G E ++K+F ++ G++P ++ ++ + C S+ G+
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
Q H I+ DSSL +AL+TMYAK G + A+ VF D VSWN+MI+ AQHG
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHG 575
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+ ++A+ ++++M K + D +TF+ + +AC+HAGLV+EG+ YFD M + P ++H
Sbjct: 576 QAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN 635
Query: 431 ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTP 490
+ ++DL RAG+ +A KV E+MP + IW ++LA CR+H ELG AAE++ + P
Sbjct: 636 SCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKP 695
Query: 491 EQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHP 550
E Y++LSNMYA G W E A+VRKLM ER VKKEPG SWIE++N + FL D HP
Sbjct: 696 EDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHP 755
Query: 551 EVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLG 610
+Y LE L ++ LGY PDT +VL D++ EHKE L+ HSE+LA+ +G++ P G
Sbjct: 756 LKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKG 815
Query: 611 ATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXX-XXXXNGECSCGNYW 662
+ + + KNLR+CGDCH K I+K +G CSCG++W
Sbjct: 816 SPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 204/486 (41%), Gaps = 99/486 (20%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 62
R G D FS+VL + + +E + +QLHC +K+G +
Sbjct: 86 RLGMEMDCSIFSSVLKVSATLCDELFG-RQLHCQCIKFGFL------------------- 125
Query: 63 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 122
D T+++ Y++ + RK+ D M V W
Sbjct: 126 -----------------------DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
+ISGY R+ + +E F +M + G Q + +T+ + + G+ G Q+H V++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 242
+ + + V+N+LI Y KCG + +AR +FDK V+ +V+WN+++SGY
Sbjct: 223 NGLDKT----IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY-------- 270
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
A +G E+L +F M+ + + ++A IK C
Sbjct: 271 -----------------------AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNA 361
L L +Q+H V++ G + AL+ Y+KC + A +F + V + VSW A
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS-------HAGLVKEGQHYF 414
MI+ Q+ +A+ L+ +M ++ + P+ T+ IL+A HA +VK
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERS 427
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
++ T L+D + GK EA KV + + W ++LAG G
Sbjct: 428 STVGTA------------LLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGE 474
Query: 475 IELGIQ 480
E I+
Sbjct: 475 TEAAIK 480
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 39/309 (12%)
Query: 97 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 156
G V + L +A L D ++ +++ G+ R G +EA F +H +G++MD
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 157 YTSL--ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 214
++S+ +SA+ LF GRQLH ++ +SV +L+ Y K R+
Sbjct: 96 FSSVLKVSATLCDELF--GRQLHCQCIKFGFLDD----VSVGTSLVDTYMKGSNFKDGRK 149
Query: 215 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 274
VFD E+ ERN++TWT +ISG A + +E
Sbjct: 150 VFD-------------------------------EMKERNVVTWTTLISGYARNSMNDEV 178
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
L LF +M++EG +P + +A A+ G G Q+H+ V++ G D ++ N+LI +
Sbjct: 179 LTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL 238
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
Y KCG V A ++F V+WN+MI+ A +G ++A+ ++ M + +F
Sbjct: 239 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298
Query: 395 LTILSACSH 403
+++ C++
Sbjct: 299 ASVIKLCAN 307
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 2/241 (0%)
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
G +++ RL A +F + P R+ ++ ++ G + G +E+ +LF + G+E
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
++ +K L G+Q+H Q I+ G +S G +L+ Y K VF M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
+ V+W +I+ A++ + + L+ +M E P+ TF L + G+ G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
++ G+ LI+L + G +A+ + + + S W S+++G +
Sbjct: 216 -VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAAN 273
Query: 473 G 473
G
Sbjct: 274 G 274
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 316/571 (55%), Gaps = 35/571 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ +I Y + L +A +L V+W MI+GY ++ ++A TFR+M GI+
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
DE T+ +SA G+Q+HA + L NAL+T Y++CGK+
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD----LPFQNALVTLYSRCGKI-- 642
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
EE+ F + + + W ++SG +SG
Sbjct: 643 -----------------------------EESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EE+L++F +M EG++ ++ + A+KA ++ G+Q+H+ + + G+DS NAL
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I+MYAKCG + A+ FL + + VSWNA+I A ++HG G +A+ ++QM+ ++ P+
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+T + +LSACSH GLV +G YF+SM + YG++P +HY ++D+L RAG S AK+ +
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
MP +P A +W +LL+ C +H N+E+G AA L EL PE TY++LSN+YA KWD
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGY 571
R+ M+E+GVKKEPG SWIE++N +H F V D HP +++Y + L ++GY
Sbjct: 914 RDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
Query: 572 IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKF 631
+ D +L++++ E K+ + HSEKLA+ +G+L LP I V KNLR+C DCH KF
Sbjct: 974 VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKF 1033
Query: 632 ISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
+SK G CSC +YW
Sbjct: 1034 VSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 196/485 (40%), Gaps = 88/485 (18%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
G P P++FS+VL A I E +QLH V+K G V N L+S Y
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIG-EQLHGLVLKLGFSSDTYVCNALVSLYFHLG---- 337
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 124
+L SA + M+ AV +N
Sbjct: 338 --------------------------------------NLISAEHIFSNMSQRDAVTYNT 359
Query: 125 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 184
+I+G + G E+A + F++MH G++ D T SL+ A G G+QLHAY +
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 185 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAK 244
+ + AL+ Y KC + A + F + V ++V WN +L Y
Sbjct: 420 FASNN----KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---------- 465
Query: 245 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG 304
GL + S ++F QM+ E + P Y Y +K C LG
Sbjct: 466 -------------------GLLDD--LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 504
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
L+ G+QIHSQ+I+ + + LI MYAK G + A + + D VSW MIA
Sbjct: 505 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 564
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMT 424
Q+ +A+ + QML I D + +SAC+ +KEGQ C G +
Sbjct: 565 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFS 623
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP----IWESLLAGCRIHGNIELGIQ 480
L+ L R GK E+ + FE + W +L++G + GN E ++
Sbjct: 624 SDLPFQNALVTLYSRCGKIEES-----YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 481 AAERL 485
R+
Sbjct: 679 VFVRM 683
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 200/450 (44%), Gaps = 74/450 (16%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y+ DL A K+ D M WN MI L E F F +M S + +E T+
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 158 TSLISASFNTGL-FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 216
+ ++ A + F+ Q+HA +L ++ S V N LI Y++ G + AR VF
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDST----VVCNPLIDLYSRNGFVDLARRVF 245
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D + ++D SW A MISGL+++ E+++
Sbjct: 246 DGLRLKDHSSWVA-------------------------------MISGLSKNECEAEAIR 274
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
LF M G+ P YA++ + AC + SL+ G+Q+H V++LG S NAL+++Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
G + A+ +F M D+V++N +I L+Q G G +A++L+++M + + PD T +
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGE-------DHYARLIDLLCRAGKFSEAK-- 447
++ ACS G + GQ + T G + YA+ D+ F E +
Sbjct: 395 LVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Query: 448 ----------------------KVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAA 482
++ M E P+ + S+L C G++ELG Q
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH 513
Query: 483 ERLFELTPEQDGTYI--ILSNMYAHLGKWD 510
++ + T Q Y+ +L +MYA LGK D
Sbjct: 514 SQIIK-TNFQLNAYVCSVLIDMYAKLGKLD 542
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 131/333 (39%), Gaps = 50/333 (15%)
Query: 239 RLEEAKFIFREVPERNLLTWTVM--ISGLAESGFGEESL----------KLFNQMKSEGL 286
R + FIF R L T TV + G + F S+ K + +++ G+
Sbjct: 21 RSVSSSFIFIHGVPRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRGI 80
Query: 287 EPCDYAYAGAIKAC-GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
P ++ C GSLD G+++HSQ+++LG DS+ L Y G + A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
VF MP +WN MI LA + L+ +M+ E++ P+ TF +L AC
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 406 LVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE--------- 456
+ + + + G+ LIDL R G A++V + + +
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 457 -------------------------PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPE 491
P+ + S+L+ C+ ++E+G Q + +L
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 492 QDGTYI--ILSNMYAHLGKWDEVARVRKLMRER 522
D TY+ L ++Y HLG + M +R
Sbjct: 321 SD-TYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 316/578 (54%), Gaps = 36/578 (6%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+D ++ Y ++D + R L D M V++N +IS Y + YE + FR+M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
MG + + +++S + N GRQLH L IL V N+L+ Y K
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS----ILHVGNSLVDMYAK 398
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
C E+F EEA+ IF+ +P+R ++WT +ISG
Sbjct: 399 C-------EMF------------------------EEAELIFKSLPQRTTVSWTALISGY 427
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
+ G LKLF +M+ L +A +KA SL G+Q+H+ +I+ G+ ++
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENV 487
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
+G+ L+ MYAKCG + A VF MP ++VSWNA+I+A A +G G AI + +M++
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIES 547
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
+ PD ++ L +L+ACSH G V++G YF +M YG+TP + HYA ++DLL R G+F+E
Sbjct: 548 GLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 607
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYA 504
A+K+ + MPFEP +W S+L CRIH N L +AAE+LF + +D Y+ +SN+YA
Sbjct: 608 AEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYA 667
Query: 505 HLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVI 564
G+W++V V+K MRERG+KK P SW+E+ + +HVF +D HP + + + +L
Sbjct: 668 AAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTA 727
Query: 565 EMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGD 624
E+ + GY PDT V+ D++ + K +L HSE+LAV + ++ P G I V KNLR C D
Sbjct: 728 EIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRD 787
Query: 625 CHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
CH A K ISK G CSCG+YW
Sbjct: 788 CHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 228/514 (44%), Gaps = 79/514 (15%)
Query: 59 CASSTLVESPVL---MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 115
C S+ +VE + +++ARK++DE P K+ S TMI+G+V+ D++SAR L D M
Sbjct: 49 CRSNFIVEDLLRRGQVSAARKVYDEMP--HKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 116 HPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSLISASFNTGLFNCG 173
V W ++ Y R+ ++EAF FR+M S D T+T+L+ + N
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 174 RQLHAYVLRTVVQPSEHFILS-----------------------------VNNALITFYT 204
Q+HA+ ++ + +S N LIT Y
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYE 226
Query: 205 KCGKLVQAREVFDKMP---------------------------------------VRDLV 225
K G ++ +F KM RD
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 226 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
N IL Y R+ E + +F E+PE + +++ V+IS +++ E SL F +M+ G
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
+ ++ +A + L SL G+Q+H Q + DS L GN+L+ MYAKC + A+
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA-CSHA 404
++F ++P +VSW A+I+ Q G ++L+ +M ++ D+ TF T+L A S A
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 405 GLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWES 464
L+ Q + G + L+D+ + G +A +V E MP + +A W +
Sbjct: 467 SLLLGKQ--LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNA 523
Query: 465 LLAGCRIHGNIELGIQAAERLFELTPEQDGTYII 498
L++ +G+ E I A ++ E + D I+
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/662 (32%), Positives = 358/662 (54%), Gaps = 42/662 (6%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ G PD F +VL + +++ + + + +H +V+ G+ C N L++ Y A
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFG-ESVHGFIVRLGMDCDLYTGNALMNMY---A 151
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ S + S +FDE P + + + S R++ + M V
Sbjct: 152 KLLGMGSKI---SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVV 208
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
++N +I+GY + G+YE+A R+M + ++ D +T +S++ G+++H YV
Sbjct: 209 SYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYV 268
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
+R + + + ++L+ Y K R+
Sbjct: 269 IRKGIDSDVY----IGSSLVDMYAKSA-------------------------------RI 293
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
E+++ +F + R+ ++W +++G ++G E+L+LF QM + ++P A++ I AC
Sbjct: 294 EDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
L +L G+Q+H V++ G S++ +AL+ MY+KCG + A +F M +D VSW
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWT 413
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
A+I A HG G +A+ L+E+M ++ + P+++ F+ +L+ACSH GLV E YF+SM
Sbjct: 414 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
YG+ +HYA + DLL RAGK EA M EP+ +W +LL+ C +H N+EL +
Sbjct: 474 YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533
Query: 481 AAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVH 540
AE++F + E G Y+++ NMYA G+W E+A++R MR++G++K+P CSWIE++N H
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTH 593
Query: 541 VFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAV 600
F+ D HP + + ++L+ ++ +M K GY+ DT VLHD++ EHK L HSE+LAV
Sbjct: 594 GFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAV 653
Query: 601 VYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGN 660
+GI+ G TIRV KN+R+C DCH A KFISK G CSCG+
Sbjct: 654 AFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGD 713
Query: 661 YW 662
YW
Sbjct: 714 YW 715
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 215/460 (46%), Gaps = 18/460 (3%)
Query: 63 TLVESPVLMAS---ARKLFDEAPLSQK-DEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
TL+++P + S A++L + +Q S + +I+ Y L A L + P
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
+AW ++I + L+ +A +F +M + G D + S++ + G +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKC---GKLVQAREVFDKMPVRDLVSWNAILSGY- 234
+++R + L NAL+ Y K G + VFD+MP R S + +
Sbjct: 130 FIVRLGMDCD----LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 235 -INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
I ++ + +F +P ++++++ +I+G A+SG E++L++ +M + L+P +
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY 353
+ + + G++IH VI+ G DS + G++L+ MYAK + ++ VF +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHY 413
D +SWN+++A Q+GR +A++L+ QM+ + P + F +++ AC+H + G+
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ- 364
Query: 414 FDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
G + L+D+ + G A+K+ + M W +++ G +HG
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHG 423
Query: 474 NIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWDE 511
+ + E + + P Q +L+ +H+G DE
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC-SHVGLVDE 462
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/660 (33%), Positives = 343/660 (51%), Gaps = 78/660 (11%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 62
R G PD ++ ++VL A S + E +Q+H +K + +V ++ +S
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK-----INNVSDSFVS-------- 455
Query: 63 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 122
T +I Y RN + A L + + VAW
Sbjct: 456 -----------------------------TALIDAYSRNRCMKEAEILFERHNFDL-VAW 485
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
NAM++GY + + F MH G + D++T ++ N G+Q+HAY ++
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 242
+ L V++ ++ Y KCG +
Sbjct: 546 S----GYDLDLWVSSGILDMYVKCGDM-------------------------------SA 570
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
A+F F +P + + WT MISG E+G E + +F+QM+ G+ P ++ A KA
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
L +L+ G+QIH+ ++L + G +L+ MYAKCG + A +F + ++ +WNAM
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
+ LAQHG G + +QL++QM I PD++TF+ +LSACSH+GLV E + SM YG
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
+ P +HY+ L D L RAG +A+ + ESM E SA ++ +LLA CR+ G+ E G + A
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 483 ERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVF 542
+L EL P Y++LSNMYA KWDE+ R +M+ VKK+PG SWIE++N +H+F
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIF 870
Query: 543 LVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVY 602
+VDD + + +Y+ ++ ++ ++++ GY+P+T F L D+E E KE AL HSEKLAV +
Sbjct: 871 VVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAF 930
Query: 603 GILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
G+L P IRV KNLR+CGDCHNA K+I+K +G CSCG+YW
Sbjct: 931 GLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 182/424 (42%), Gaps = 57/424 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL-----YEEAFDTFRKMH 146
+I+ Y + L AR++ D M V+WN++++ Y + ++AF FR +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
+ T + ++ ++G H Y + + E V AL+ Y K
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF----VAGALVNIYLKF 193
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV------PERNLLTWTV 260
GK+ + + +F++MP RD+V WN +L Y+ EEA + P L
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 261 MIS-----------------------------GLAE---SGFGEESLKLFNQMKSEGLEP 288
IS GL+E SG LK F M +E
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE- 312
Query: 289 CDYAYAGAIKACGV-LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
CD + A V + SL GQQ+H ++LG D L+ N+LI MY K G+A V
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F M D +SWN++IA +AQ+G V+A+ L+ Q+L+ + PD+ T ++L A S +
Sbjct: 373 FDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---L 429
Query: 408 KEGQHYFDSMCTH-YGMTPGEDHYAR--LIDLLCRAGKFSEAKKVTESMPFEPSAPIWES 464
EG + H + D + LID R EA+ + E F+ A W +
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVA--WNA 487
Query: 465 LLAG 468
++AG
Sbjct: 488 MMAG 491
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 194/448 (43%), Gaps = 50/448 (11%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
DE ++ Y++ + + L + M + V WN M+ Y+ G EEA D H
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 147 SMGIQMDEYTYTSL----------------------------------ISASFNTGLFNC 172
S G+ +E T L +S ++G ++
Sbjct: 239 SSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSA 298
Query: 173 GRQLHAYVLRTVVQPSE-HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 231
+ A ++ + V+ + FIL + A+ G+ V + + + VS N+++
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS-NSLI 357
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+ Y R+ A+ +F + ER+L++W +I+G+A++G E++ LF Q+ GL+P Y
Sbjct: 358 NMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQY 417
Query: 292 AYAGAIKACGVL-GSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
+KA L L +Q+H I++ + S ALI Y++ + A+++F
Sbjct: 418 TMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER 477
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
+ D V+WNAM+A Q G + ++L+ M K+ D T T+ C + +G
Sbjct: 478 HNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
Query: 411 QHYFDSMCTHYGMTPGEDH----YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
+ Y + G D + ++D+ + G S A+ +S+P P W +++
Sbjct: 537 KQVH-----AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMI 590
Query: 467 AGCRIHGNIELGIQ--AAERLFELTPEQ 492
+GC +G E + RL + P++
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDE 618
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 40/227 (17%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G+ HA +L T + E F++ N LI+ Y+KCG L AR VFDKMP RDLVSWN+IL+
Sbjct: 58 GKCTHARIL-TFEENPERFLI---NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 233 GYINA-----RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
Y + +++A +FR + + + T + +S +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM---------------------- 151
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
+K C G + + H ++G D AL+ +Y K G V ++
Sbjct: 152 ---------LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
F MPY D V WN M+ A + G +AI L + P+ IT
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 146/372 (39%), Gaps = 80/372 (21%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M + G D F+ +TV + +Q+H +K G V + +L Y+ C
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAIN-QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCG 566
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
M++A+ FD P+ D+ +WTTMI+G + N
Sbjct: 567 D---------MSAAQFAFDSIPVP--DDVAWTTMISGCIEN------------------- 596
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
G E AF F +M MG+ DE+T +L AS GRQ+HA
Sbjct: 597 ------------GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
L+ V +L+ Y KCG + A +F ++ + ++ +WNA
Sbjct: 645 LKLNCTNDPF----VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA----------- 689
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
M+ GLA+ G G+E+L+LF QMKS G++P + G + AC
Sbjct: 690 --------------------MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 301 GVLGSLDNG-QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS- 358
G + + + S G + + L + G+V A+ + +M S S
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 359 WNAMIAALAQHG 370
+ ++AA G
Sbjct: 790 YRTLLAACRVQG 801
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 7/163 (4%)
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQ 368
G+ H++++ + N LI+MY+KCG + YA VF MP D VSWN+++AA AQ
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 369 HGRGV-----QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGM 423
V QA L+ + ++ + R+T +L C H+G V + + C G+
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC-KIGL 176
Query: 424 TPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
E L+++ + GK E K + E MP+ +W +L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/695 (32%), Positives = 360/695 (51%), Gaps = 48/695 (6%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M G PD +F +VL A + + ++HC +K+G M V +L+ Y
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKFGFMWDVYVAASLIHLY---- 195
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ +AR LFDE P+ +D SW MI+GY ++ + A L +G+ +V
Sbjct: 196 -----SRYKAVGNARILFDEMPV--RDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV 248
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG-LFNCGRQLHAY 179
+++S G + G++ + + LI G L +C +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 180 VLRTVV-------------QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP------ 220
+R ++ QP L L C L+ + ++
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 221 ------------VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+ D+ NA++ Y ++ A+ +F +P ++++W +ISG A++
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 269 GFGEESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
GF E+++++N M+ EG + + + AC G+L G ++H ++++ G +
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
+L MY KCG + A +F +P V+SV WN +IA HG G +A+ L+++ML E +
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
PD ITF+T+LSACSH+GLV EGQ F+ M T YG+TP HY ++D+ RAG+ A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLG 507
K +SM +P A IW +LL+ CR+HGN++LG A+E LFE+ PE G +++LSNMYA G
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 508 KWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR 567
KW+ V +R + +G++K PG S +E++N V VF + HP +Y+ L L +++
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 568 KLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHN 627
+GY+PD +FVL D+E + KEH L +HSE+LA+ + ++ P TIR+FKNLR+CGDCH+
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 628 AFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KFISK NG CSCG+YW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 140/308 (45%), Gaps = 45/308 (14%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK-MHSMGIQMDEYTYTSLI 161
++A AR D + + AWN MISGY R G E F M S G+ D T+ S++
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL 160
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
A G ++H L+ + + V +LI Y++ + AR +FD+MPV
Sbjct: 161 KACRTV---IDGNKIHCLALKFGFM----WDVYVAASLIHLYSRYKAVGNARILFDEMPV 213
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
RD+ SWNA++SGY +SG +E+L L
Sbjct: 214 RDMGSWNAMISGY-------------------------------CQSGNAKEALTL---- 238
Query: 282 KSEGLEPCD-YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
S GL D + AC G + G IHS I+ G +S L N LI +YA+ G
Sbjct: 239 -SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ VF M D +SWN++I A + + ++AI L+++M I PD +T +++ S
Sbjct: 298 LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357
Query: 401 CSHAGLVK 408
S G ++
Sbjct: 358 LSQLGDIR 365
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 316/581 (54%), Gaps = 36/581 (6%)
Query: 83 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 142
+ +K+ S +I GYVR DL +ARK+ D M WNAMI+G ++ EE F
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
R+MH +G DEYT S+ S S + G+Q+H Y ++ ++ L VN++L
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE----LDLVVNSSLAHM 135
Query: 203 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 262
Y + GKL ++ + + R +P RNL+ W +I
Sbjct: 136 YMRNGKL-------------------------------QDGEIVIRSMPVRNLVAWNTLI 164
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
G A++G E L L+ MK G P + + +C L GQQIH++ I++G
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
S ++ ++LI+MY+KCG +G A F D V W++MI+A HG+G +AI+L+ M
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 383 LKE-DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAG 441
++ ++ + + FL +L ACSH+GL +G FD M YG PG HY ++DLL RAG
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 442 KFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSN 501
+A+ + SMP + IW++LL+ C IH N E+ + + + ++ P Y++L+N
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLAN 404
Query: 502 MYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQ 561
++A +W +V+ VRK MR++ VKKE G SW E + VH F + D + +Y YL++
Sbjct: 405 VHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 464
Query: 562 LVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRM 621
L +EM+ GY PDT VLHDM+ E KE L HSEKLAV + ++ LP GA IR+ KNLR+
Sbjct: 465 LTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRV 524
Query: 622 CGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
C DCH AFK+IS NG+CSCG+YW
Sbjct: 525 CSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 4/325 (1%)
Query: 200 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWT 259
++ Y+K G A V+ +M ++ +S N +++GY+ A L A+ +F E+P+R L TW
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
MI+GL + F EE L LF +M G P +Y L S+ GQQIH I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLY 379
G + L ++L MY + G + ++V +MP + V+WN +I AQ+G + LY
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 380 EQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCR 439
+ M P++ITF+T+LS+CS + +GQ + G + + LI + +
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ-IHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 440 AGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIIL 499
G +A K E +W S+++ HG + I+ + E T + L
Sbjct: 240 CGCLGDAAKAFSEREDEDEV-MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 500 SNMYA--HLGKWDEVARVRKLMRER 522
+ +YA H G D+ + +M E+
Sbjct: 299 NLLYACSHSGLKDKGLELFDMMVEK 323
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/648 (34%), Positives = 344/648 (53%), Gaps = 61/648 (9%)
Query: 70 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGY 129
L AR+LFDE +S+++ SW +++GY++N + AR + + M V+W AM+ GY
Sbjct: 63 LPKEARQLFDE--MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120
Query: 130 VRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 189
++ G+ EA F +M + +E ++T + + G + R+L+ + V S
Sbjct: 121 MQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAST 176
Query: 190 HFI-----------------------LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
+ I + +IT Y + ++ AR++F+ MP + VS
Sbjct: 177 NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS 236
Query: 227 WNAILSGYINARRLEEAKFIFREVP-------------------------------ERNL 255
W ++L GY + R+E+A+ F +P +R+
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDN 296
Query: 256 LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
TW MI GF E+L LF QM+ +G+ P + + C L SL G+Q+H+
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
+++ D + + L+TMY KCG + A +VF D + WN++I+ A HG G +A
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
++++ +M +P+++T + IL+ACS+AG ++EG F+SM + + +TP +HY+ +D
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGT 495
+L RAG+ +A ++ ESM +P A +W +LL C+ H ++L AA++LFE P+ GT
Sbjct: 477 MLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGT 536
Query: 496 YIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDD-AVHPEVHA 554
Y++LS++ A KW +VA VRK MR V K PGCSWIE+ VH+F HPE
Sbjct: 537 YVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Query: 555 VYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIR 614
+ LE+ +R+ GY PD VLHD++ E K +LS HSE+LAV YG+LKLP G IR
Sbjct: 597 ILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIR 656
Query: 615 VFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
V KNLR+CGDCH A K ISK NGECSC +YW
Sbjct: 657 VMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 202/448 (45%), Gaps = 52/448 (11%)
Query: 95 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 154
I+ R + ARK D + +WN+++SGY +GL +EA F +M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 155 YTYTSLISASFNTGLFNCGRQ----------------LHAYVLRTVVQPSEHFILSVNNA 198
++ L+S + R + Y+ +V +E +
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 199 LITFYT-------KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 251
+T G++ +AR+++D MPV+D+V+ ++ G R++EA+ IF E+
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
ERN++TWT MI+G ++ + + KLF M E + ++ + + G +++ ++
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEE 255
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+V+ + + A NA+I + + G + A VF M D+ +W MI A + G
Sbjct: 256 FF-EVMPM---KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ--HYFDSMCTHYGMTPGEDH 429
++A+ L+ QM K+ + P + ++ILS C+ ++ G+ H C +D
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF-----DDDV 366
Query: 430 Y--ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
Y + L+ + + G+ +AK V + +W S+++G HG LG +A + E
Sbjct: 367 YVASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHG---LGEEALKIFHE 422
Query: 488 L----TPEQDGTYIILSNMYAHLGKWDE 511
+ T T I + ++ GK +E
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEE 450
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 58/326 (17%)
Query: 200 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWT 259
I+ ++ GK+ +AR+ FD + + + SWN+I+SGY + +EA+ +F E+ ERN+++W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
++SG + N+M E V +L
Sbjct: 84 GLVSGYIK-----------NRMIVEA----------------------------RNVFEL 104
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLY 379
+ ++ + A++ Y + G+VG A+ +F MP + VSW M L GR +A +LY
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 380 EQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCR 439
+ M +D+ + ++ G V E + FD M +T + +I +
Sbjct: 165 DMMPVKDV----VASTNMIGGLCREGRVDEARLIFDEMRERNVVT-----WTTMITGYRQ 215
Query: 440 AGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIIL 499
+ A+K+ E MP E + W S+L G + G IE AE FE+ P + I
Sbjct: 216 NNRVDVARKLFEVMP-EKTEVSWTSMLLGYTLSGRIE----DAEEFFEVMPMK--PVIAC 268
Query: 500 SNMYAHLGKWDEVARVRK---LMRER 522
+ M G+ E+++ R+ LM +R
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDR 294
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/633 (35%), Positives = 347/633 (54%), Gaps = 34/633 (5%)
Query: 43 MCVPSVLNTLLSCYICCASSTLVESPVLMASARKL--FDEAPLSQKDEPSWTTMIAGYVR 100
M +P L+ L +C + TL + L A KL PL+ T++ Y +
Sbjct: 1 MLIPHYLHQL---QLCARNRTLTTAKALHAHIVKLGIVQCCPLAN-------TLVNVYGK 50
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTS 159
+ A ++ D M H +AW ++++ + L + F + S ++ D++ +++
Sbjct: 51 CGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSA 110
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS-------VNNALITFYTKCGKLVQA 212
L+ A N G + GRQ+H HFI+S V ++L+ Y KCG L A
Sbjct: 111 LVKACANLGSIDHGRQVHC-----------HFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
+ VFD + V++ +SW A++SGY + R EEA +FR +P +NL +WT +ISG +SG G
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 273 ESLKLFNQMKSEGLEPCD-YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E+ +F +M+ E ++ D + + AC L + G+Q+H VI LG DS + NAL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MYAKC V A +F M + D VSW ++I +AQHG+ +A+ LY+ M+ + P+
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+TF+ ++ ACSH G V++G+ F SM YG+ P HY L+DLL R+G EA+ +
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWD 510
+MPF P P W +LL+ C+ G ++GI+ A+ L +D TYI+LSN+YA W
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG 459
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR-KL 569
+V+ R+ + E V+K+PG S +E+ VF + HP +++ L++L EMR +
Sbjct: 460 KVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRN 519
Query: 570 GYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAF 629
GY+PDT ++LHDM+ + KE L HSE+ AV YG+LK G IR+ KNLR+CGDCH
Sbjct: 520 GYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVL 579
Query: 630 KFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K IS+ G+CSC ++W
Sbjct: 580 KHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 313/543 (57%), Gaps = 36/543 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T++ Y + L ARK+ + M V W +ISGY +H +A F +M G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+E+T +S+I A+ CG QLH + ++ + H V +AL+ YT+ G
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH----VGSALLDLYTRYG---- 210
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+++A+ +F + RN ++W +I+G A
Sbjct: 211 ---------------------------LMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E++L+LF M +G P ++YA AC G L+ G+ +H+ +I+ G AGN L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MYAK G + A +F + D VSWN+++ A AQHG G +A+ +E+M + I P+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
I+FL++L+ACSH+GL+ EG HY++ M G+ P HY ++DLL RAG + A + E
Sbjct: 364 ISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
MP EP+A IW++LL CR+H N ELG AAE +FEL P+ G ++IL N+YA G+W++
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWND 482
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGY 571
ARVRK M+E GVKKEP CSW+EIEN +H+F+ +D HP+ + + E+++ ++++LGY
Sbjct: 483 AARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Query: 572 IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKF 631
+PDT V+ ++ + +E L HSEK+A+ + +L P G+TI + KN+R+CGDCH A K
Sbjct: 543 VPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKL 602
Query: 632 ISK 634
SK
Sbjct: 603 ASK 605
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 180/384 (46%), Gaps = 48/384 (12%)
Query: 150 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
I D Y +L+ L GR +HA++L+++ + H I+ + N L+ Y KCG L
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFR---HDIV-MGNTLLNMYAKCGSL 111
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
EEA+ +F ++P+R+ +TWT +ISG ++
Sbjct: 112 -------------------------------EEARKVFEKMPQRDFVTWTTLISGYSQHD 140
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
++L FNQM G P ++ + IKA G Q+H ++ G DS++ G+
Sbjct: 141 RPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGS 200
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
AL+ +Y + G++ A +VF + + VSWNA+IA A+ +A++L++ ML++ P
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRP 260
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA----RLIDLLCRAGKFSE 445
++ ++ ACS G +++G+ Y + GE A L+D+ ++G +
Sbjct: 261 SHFSYASLFGACSSTGFLEQGK-----WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAE--RLFELTPEQDGTYIILSNMY 503
A+K+ + + + W SLL HG + + E R + P + +L+
Sbjct: 316 ARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC- 373
Query: 504 AHLGKWDEVARVRKLMRERGVKKE 527
+H G DE +LM++ G+ E
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPE 397
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 152/371 (40%), Gaps = 81/371 (21%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M R G++P+ F+ S+V+ A + AE C QLH VK G V + LL Y
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAA--AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
LM A+ +FD L +++ SW +IAG+ R A +L GM
Sbjct: 210 G---------LMDDAQLVFD--ALESRNDVSWNALIAGHARRSGTEKALELFQGMLR--- 255
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
D FR H ++Y SL A +TG G+ +HAY
Sbjct: 256 --------------------DGFRPSH--------FSYASLFGACSSTGFLEQGKWVHAY 287
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
++++ E + N L+ Y K G + AR++FD++ RD+VSWN++L+ Y
Sbjct: 288 MIKS----GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY----- 338
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
A+ GFG+E++ F +M+ G+ P + ++ + A
Sbjct: 339 --------------------------AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS- 358
C G LD G + + + G ++ + + G + A MP + +
Sbjct: 373 CSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432
Query: 359 WNAMIAALAQH 369
W A++ A H
Sbjct: 433 WKALLNACRMH 443
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/615 (35%), Positives = 336/615 (54%), Gaps = 40/615 (6%)
Query: 49 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 108
L T++S + CA S L+ L + + +A S++D T++ Y + DL SA+
Sbjct: 296 LATIVSVFAGCADSRLIS---LGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAK 351
Query: 109 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 168
+ M+ V++ +MI+GY R GL EA F +M GI D YT T++++
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 169 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 228
L + G+++H ++ + F + V+NAL+ Y KCG +
Sbjct: 412 LLDEGKRVHEWIKENDLG----FDIFVSNALMDMYAKCGSM------------------- 448
Query: 229 AILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LE 287
+EA+ +F E+ +++++W +I G +++ + E+L LFN + E
Sbjct: 449 ------------QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P + A + AC L + D G++IH +++ G+ S N+L+ MYAKCG + A M+
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F + D VSW MIA HG G +AI L+ QM + I D I+F+++L ACSH+GLV
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
EG +F+ M + P +HYA ++D+L R G +A + E+MP P A IW +LL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 468 GCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
GCRIH +++L + AE++FEL PE G Y++++N+YA KW++V R+RK + +RG++K
Sbjct: 677 GCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 736
Query: 528 PGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHK 587
PGCSWIEI+ V++F+ D+ +PE + +L ++ M + GY P TK+ L D E K
Sbjct: 737 PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEK 796
Query: 588 EHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXX 647
E AL HSEKLA+ GI+ G IRV KNLR+CGDCH KF+SK
Sbjct: 797 EEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNR 856
Query: 648 XXXXXNGECSCGNYW 662
+G CSC +W
Sbjct: 857 FHQFKDGHCSCRGFW 871
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 211/445 (47%), Gaps = 52/445 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++A Y++N + SARK+ D MT ++WN++I+GYV +GL E+ F +M GI+
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+D T S+ + ++ L + GR +H+ ++ + F N L+ Y+KCG L
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC----NTLLDMYSKCGDLDS 349
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A+ VF +M R +VS+ ++++GY A G
Sbjct: 350 AKAVFREMSDRSVVSYTSMIAGY-------------------------------AREGLA 378
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ--LGHDSSLSAGN 329
E++KLF +M+ EG+ P Y + C LD G+++H + + LG D +S N
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS--N 436
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL- 388
AL+ MYAKCG + A++VF M D +SWN +I +++ +A+ L+ +L+E
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPG---EDHYAR-LIDLLCRAGKFS 444
PD T +L AC+ +G+ Y M G + H A L+D+ + G
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHG-----YIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMY 503
A + + + + W ++AG +HG + I ++ + E D +++ L
Sbjct: 552 LAHMLFDDIASKDLVS-WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 504 AHLGKWDEVARVRKLMRERGVKKEP 528
+H G DE R +MR K EP
Sbjct: 611 SHSGLVDEGWRFFNIMRHE-CKIEP 634
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 43/374 (11%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y DL A ++ D + A+ WN +++ + G + + F+KM S G++MD YT+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 158 TSLISASFNT-GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 216
S +S SF++ + G QLH ++L++ SV N+L+ FY K ++ AR+VF
Sbjct: 199 -SCVSKSFSSLRSVHGGEQLHGFILKSGFGERN----SVGNSLVAFYLKNQRVDSARKVF 253
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D+M RD++SWN+I++GY++ +GLAE G L
Sbjct: 254 DEMTERDVISWNSIINGYVS--------------------------NGLAEKG-----LS 282
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
+F QM G+E C + G+ +HS ++ N L+ MY+
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
KCG + A VF M VS+ +MIA A+ G +A++L+E+M +E I PD T
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR--LIDLLCRAGKFSEAKKVTESMP 454
+L+ C+ L+ EG+ + + + G D + L+D+ + G EA+ V M
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 455 FEPSAPIWESLLAG 468
+ W +++ G
Sbjct: 460 VKDIIS-WNTIIGG 472
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 5/290 (1%)
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
Y N L+EA +F EV L W ++++ LA+SG S+ LF +M S G+E Y +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY 353
+ K+ L S+ G+Q+H +++ G S GN+L+ Y K V A VF M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHY 413
D +SWN++I +G + + ++ QML I D T +++ + C+ + L+ G+
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA- 317
Query: 414 FDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
S+ + + L+D+ + G AK V M + S + S++AG G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREG 376
Query: 474 NIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRE 521
++ E + E ++P+ +L N A DE RV + ++E
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVL-NCCARYRLLDEGKRVHEWIKE 425
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 92/229 (40%), Gaps = 4/229 (1%)
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
+R++ + ESG E ++KL ++P ++ C SL +G++
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGKE 115
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+ + + G + G+ L MY CG + A VF + ++ WN ++ LA+ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
+I L+++M+ + D TF + + S V G+ G
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ-LHGFILKSGFGERNSVGN 234
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
L+ + + A+KV + M E W S++ G +G E G+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKGLS 282
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/482 (40%), Positives = 294/482 (60%), Gaps = 9/482 (1%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ ++ Y + ++ A+++ D M V+WN++I+ + ++G EA D F+ M ++
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
DE T S+ISA + G+++H V++ + ILS NA + Y KC ++ +
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKND-KLRNDIILS--NAFVDMYAKCSRIKE 307
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
AR +FD MP+R++++ +++SGY A + A+ +F ++ ERN+++W +I+G ++G
Sbjct: 308 ARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN 367
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI------QLGHDSSL 325
EE+L LF +K E + P Y++A +KAC L L G Q H V+ Q G + +
Sbjct: 368 EEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDI 427
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
GN+LI MY KCG V +VF M D VSWNAMI AQ+G G +A++L+ +ML+
Sbjct: 428 FVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLES 487
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
PD IT + +LSAC HAG V+EG+HYF SM +G+ P DHY ++DLL RAG E
Sbjct: 488 GEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAH 505
AK + E MP +P + IW SLLA C++H NI LG AE+L E+ P G Y++LSNMYA
Sbjct: 548 AKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAE 607
Query: 506 LGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIE 565
LGKW++V VRK MR+ GV K+PGCSWI+I+ HVF+V D HP ++ L+ L+ E
Sbjct: 608 LGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAE 667
Query: 566 MR 567
MR
Sbjct: 668 MR 669
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 157/281 (55%), Gaps = 4/281 (1%)
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
R +HA V+++ +E FI N LI Y+KCG L R+VFDKMP R++ +WN++++G
Sbjct: 40 RYVHASVIKSGFS-NEIFI---QNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTG 95
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
L+EA +FR +PER+ TW M+SG A+ EE+L F M EG +Y++
Sbjct: 96 LTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY 353
A + AC L ++ G Q+HS + + S + G+AL+ MY+KCG V A VF M
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHY 413
+ VSWN++I Q+G V+A+ +++ ML+ + PD +T +++SAC+ +K GQ
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 414 FDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
+ + + +D+ + + EA+ + +SMP
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 207/484 (42%), Gaps = 88/484 (18%)
Query: 29 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 88
+ + +H V+K G + N L+ Y C S + R++FD+ P Q++
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS---------LEDGRQVFDKMP--QRNI 86
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 148
+W +++ G + L A L M WN+M+SG+ +H EEA F MH
Sbjct: 87 YTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKE 146
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
G ++EY++ S++SA N G Q+H+ + ++ + + +AL+ Y+KCG
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVY----IGSALVDMYSKCGN 202
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+ A+ VFD+M R++VSWN+ +I+ ++
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNS-------------------------------LITCFEQN 231
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI---QLGHDSSL 325
G E+L +F M +EP + A I AC L ++ GQ++H +V+ +L +D L
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPY-------------------------------V 354
S NA + MYAKC + A +F +MP
Sbjct: 292 S--NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+ VSWNA+IA Q+G +A+ L+ + +E + P +F IL AC+ + G
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 415 DSMCTH-YGMTPGEDHY----ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
+ H + GE+ LID+ + G E V M E W +++ G
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGF 468
Query: 470 RIHG 473
+G
Sbjct: 469 AQNG 472
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 320/565 (56%), Gaps = 9/565 (1%)
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 160
+D L A+ + DG P WN MI G+ E + +++M + YT+ SL
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 121
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 220
+ A N F Q+HA + + + + + N+LI Y G A +FD++P
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAV----NSLINSYAVTGNFKLAHLLFDRIP 177
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
D VSWN+++ GY+ A +++ A +FR++ E+N ++WT MISG ++ +E+L+LF++
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV--IQLGHDSSLSAGNALITMYAKC 338
M++ +EP + + A A+ AC LG+L+ G+ IHS + ++ DS L G LI MYAKC
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVL--GCVLIDMYAKC 295
Query: 339 GVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTIL 398
G + A VF + +W A+I+ A HG G +AI + +M K I P+ ITF +L
Sbjct: 296 GEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 399 SACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
+ACS+ GLV+EG+ F SM Y + P +HY ++DLL RAG EAK+ + MP +P+
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKL 518
A IW +LL CRIH NIELG + E L + P G Y+ +N++A KWD+ A R+L
Sbjct: 416 AVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRL 475
Query: 519 MRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFV 578
M+E+GV K PGCS I +E H FL D HPE+ + + ++ + GY+P+ + +
Sbjct: 476 MKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEM 535
Query: 579 LHDM-ESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXX 637
L D+ + + +E + HSEKLA+ YG++K G IR+ KNLR+C DCH K ISK
Sbjct: 536 LLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYK 595
Query: 638 XXXXXXXXXXXXXXXNGECSCGNYW 662
+G+CSCG+YW
Sbjct: 596 RDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 22/311 (7%)
Query: 7 AP-DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLV 65
AP + ++F ++L A S ++ E Q+H + K G +N+L++ Y + L
Sbjct: 111 APHNAYTFPSLLKACSNLSAFE-ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL- 168
Query: 66 ESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM 125
A LFD P + D+ SW ++I GYV+ + A L M A++W M
Sbjct: 169 --------AHLLFDRIP--EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTM 218
Query: 126 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 185
ISGYV+ + +EA F +M + ++ D + + +SA G G+ +H+Y+ +T +
Sbjct: 219 ISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRI 278
Query: 186 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 245
+ + LI Y KCG++ +A EVF + + + +W A++SGY EA
Sbjct: 279 RMDS----VLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 246 IFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKAC 300
F E+ + N++T+T +++ + +G EE +F M+ + L+P Y +
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLL 394
Query: 301 GVLGSLDNGQQ 311
G G LD ++
Sbjct: 395 GRAGLLDEAKR 405
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 326/572 (56%), Gaps = 5/572 (0%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ ++ Y++ + + A++L D NAM S YVR GL EA F M G++
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D + S IS+ G+ H YVLR + ++ + NALI Y KC +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN----ICNALIDMYMKCHRQDT 390
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +FD+M + +V+WN+I++GY+ ++ A F +PE+N+++W +ISGL +
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 272 EESLKLFNQMKS-EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
EE++++F M+S EG+ ACG LG+LD + I+ + + G + G
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+ M+++CG A +F ++ D +W A I A+A G +AI+L++ M+++ + PD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+ F+ L+ACSH GLV++G+ F SM +G++P + HY ++DLL RAG EA ++
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
E MP EP+ IW SLLA CR+ GN+E+ AAE++ L PE+ G+Y++LSN+YA G+W+
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
++A+VR M+E+G++K PG S I+I H F D HPE+ + L+++ LG
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
Query: 571 YIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFK 630
++PD VL D++ + K LS HSEKLA+ YG++ G TIR+ KNLR+C DCH+ K
Sbjct: 751 HVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAK 810
Query: 631 FISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
F SK G+CSCG++W
Sbjct: 811 FASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 64/384 (16%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
+N++I GY GL EA F +M + GI D+YT+ +SA + G Q+H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+ L V N+L+ FY +CG+L AR+VFD+M R++VSW +++ GY ARR
Sbjct: 162 KMGYAKD----LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--ARR-- 213
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKAC 300
F ++++ LF +M + E + P I AC
Sbjct: 214 ---------------------------DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
L L+ G+++++ + G + + +AL+ MY KC + A +F + N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS-----------HAGLVKE 409
AM + + G +A+ ++ M+ + PDRI+ L+ +S+CS H +++
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
G +D++C LID+ + + A ++ + M + W S++AG
Sbjct: 367 GFESWDNICNA------------LIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGY 413
Query: 470 RIHGNIELGIQAAERLFELTPEQD 493
+G ++ AA FE PE++
Sbjct: 414 VENGEVD----AAWETFETMPEKN 433
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 183/449 (40%), Gaps = 76/449 (16%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT-FRK 144
KD +++ Y +L SARK+ D M+ V+W +MI GY R ++A D FR
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
+ + + T +ISA G +++A++ + ++ ++ + +AL+ Y
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV----SALVDMYM 282
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
KC + A+ +FD+ +L NA+ S Y+
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYV----------------------------- 313
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
G E+L +FN M G+ P + AI +C L ++ G+ H V++ G +S
Sbjct: 314 --RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 325 LSAGNALITMYAKCG-----------------------VVGYADM--------VFLTMPY 353
+ NALI MY KC V GY + F TMP
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILSACSHAG---LVKE 409
+ VSWN +I+ L Q +AI+++ M +E + D +T ++I SAC H G L K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
+Y + + G L+D+ R G A + S+ W + +
Sbjct: 492 IYYYIEKNGIQLDVRLG----TTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAM 546
Query: 470 RIHGNIELGIQAAERLFELTPEQDGTYII 498
+ GN E I+ + + E + DG +
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 178/402 (44%), Gaps = 52/402 (12%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M G PD S + + + S + W + H V++ G ++ N L+ Y+ C
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+A ++FD +S K +W +++AGYV N ++ +A + + M V
Sbjct: 387 RQD---------TAFRIFDR--MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
+WN +ISG V+ L+EEA + F M S G+ D T S+ SA + G + + ++ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+ + +Q + + L+ +++CG A +F+ + RD+ +
Sbjct: 496 IEKNGIQ----LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA------------- 538
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
WT I +A +G E +++LF+ M +GL+P A+ GA+ A
Sbjct: 539 ------------------WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 300 CGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSV 357
C G + G++I +++L G ++ + + G++ A + MP + V
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
WN+++AA G A E++ + + P+R +LS
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKI--QVLAPERTGSYVLLS 680
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/580 (36%), Positives = 316/580 (54%), Gaps = 28/580 (4%)
Query: 87 DEPSW--TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
DE S+ + ++ Y + S R++ DGM WNAMI+GY ++ +EA F
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 145 M-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
M S G+ + T ++ A +G F+ +H +V++ + V N L+ Y
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF----VQNTLMDMY 450
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
++ GK+ A +F KM RDLV+WN +++GY+ + E+A + ++ +NL
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM--QNL-------- 500
Query: 264 GLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
K+ L+P + +C L +L G++IH+ I+ +
Sbjct: 501 ----------ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 550
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
++ G+AL+ MYAKCG + + VF +P + ++WN +I A HG G +AI L M+
Sbjct: 551 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
+ + P+ +TF+++ +ACSH+G+V EG F M YG+ P DHYA ++DLL RAG+
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 444 SEAKKVTESMPFE-PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNM 502
EA ++ MP + A W SLL RIH N+E+G AA+ L +L P Y++L+N+
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 503 YAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
Y+ G WD+ VR+ M+E+GV+KEPGCSWIE + VH F+ D+ HP+ + YLE L
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 563 VIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMC 622
MRK GY+PDT VLH++E + KE L HSEKLA+ +GIL G IRV KNLR+C
Sbjct: 791 WERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVC 850
Query: 623 GDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
DCH A KFISK NG CSCG+YW
Sbjct: 851 NDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 188/441 (42%), Gaps = 47/441 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T++A Y + LAS++ LL V WN ++S ++ EA + R+M G++
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
DE+T +S++ A + + G++LHAY L+ F V +AL+ Y C +++
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF---VGSALVDMYCNCKQVLS 356
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
R VFD M R + WNA+++GY +EA +F G+ ES
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF---------------IGMEESA-- 399
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
GL AG + AC G+ + IH V++ G D N L
Sbjct: 400 -------------GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML-------- 383
+ MY++ G + A +F M D V+WN MI A+ L +M
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 384 ---KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
+ + P+ IT +TIL +C+ + +G+ + + + L+D+ +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF-ELTPEQDGTYIIL 499
G ++KV + +P + + W ++ +HGN + I + + + T+I +
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 500 SNMYAHLGKWDEVARVRKLMR 520
+H G DE R+ +M+
Sbjct: 625 FAACSHSGMVDEGLRIFYVMK 645
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 160/350 (45%), Gaps = 39/350 (11%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
W ++ VR L EA T+ M +GI+ D Y + +L+ A + G+Q+HA+V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+ ++V N L+ Y KCG +VFD++ R+ VSWN+++S + + E
Sbjct: 125 KFGYGVDS---VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE 181
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
A L+ F M E +EP + + AC
Sbjct: 182 MA-------------------------------LEAFRCMLDENVEPSSFTLVSVVTACS 210
Query: 302 VLG---SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
L L G+Q+H+ ++ G +S N L+ MY K G + + ++ + D V+
Sbjct: 211 NLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
WN ++++L Q+ + ++A++ +M+ E + PD T ++L ACSH +++ G+
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ + + L+D+ C + ++V + M F+ +W +++AG
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAG 378
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 193/473 (40%), Gaps = 93/473 (19%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVK--WGVMCVPSVLNTLLSCYICCASS 62
G PD ++F +L A++ + + E +Q+H V K +GV V +V NTL++ Y C
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELG-KQIHAHVYKFGYGVDSV-TVANTLVNLYRKCG-- 147
Query: 63 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 122
D + K+ D ++ V+W
Sbjct: 148 ----------------------------------------DFGAVYKVFDRISERNQVSW 167
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL---FNCGRQLHAY 179
N++IS +E A + FR M ++ +T S+++A N + G+Q+HAY
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
LR S FI+ N L+ Y K GKL ++ + RDLV+WN +LS +
Sbjct: 228 GLRKGELNS--FII---NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
L EA L+ +M EG+EP ++ + + A
Sbjct: 283 LLEA-------------------------------LEYLREMVLEGVEPDEFTISSVLPA 311
Query: 300 CGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
C L L G+++H+ ++ G D + G+AL+ MY C V VF M
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACSHAGLV--KEGQHYFD 415
WNAMIA +Q+ +A+ L+ M + +L + T ++ AC +G KE H F
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF- 430
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
G+ L+D+ R GK A ++ M + W +++ G
Sbjct: 431 --VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 320/581 (55%), Gaps = 41/581 (7%)
Query: 88 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH-GLYEEAFDTFRKMH 146
E S M A + + RK+ D M ++W A+I+GY+++ L EA + F +M
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 147 SMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
+ G ++ + +T++S A CG V + V+ + L+ N+++
Sbjct: 365 TQGHVEPNHFTFSSAFKA--------CGNLSDPRVGKQVLGQAFKRGLASNSSVA----- 411
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
N+++S ++ + R+E+A+ F + E+NL+++ + G
Sbjct: 412 ----------------------NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
+ E++ KL +++ L + +A + +GS+ G+QIHSQV++LG +
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
NALI+MY+KCG + A VF M + +SW +MI A+HG ++ ++ + QM++E
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
+ P+ +T++ ILSACSH GLV EG +F+SM + + P +HYA ++DLLCRAG ++
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAH 505
A + +MPF+ +W + L CR+H N ELG AA ++ EL P + YI LSN+YA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 506 LGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIE 565
GKW+E +R+ M+ER + KE GCSWIE+ + +H F V D HP H +Y L++L+ E
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITE 749
Query: 566 MRKLGYIPDTKFVLHDM----ESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRM 621
+++ GY+PDT VLH + + KE L HSEK+AV +G++ +RVFKNLR+
Sbjct: 750 IKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRV 809
Query: 622 CGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
CGDCHNA K+IS +G+CSC +YW
Sbjct: 810 CGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 202/491 (41%), Gaps = 85/491 (17%)
Query: 78 FDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH---PIAVAWNAMISGYVRHGL 134
FD P D + ++I+ Y ++ D A A + + M V+W+AM++ Y +G
Sbjct: 91 FDIEP----DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 135 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 194
+A F + +G+ ++Y YT++I A N+ GR ++++T S+ +
Sbjct: 147 ELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD---VC 203
Query: 195 VNNALITFYTKC-GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
V +LI + K A +VFDKM E
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMS-------------------------------EL 232
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
N++TWT+MI+ + GF E+++ F M G E + + AC L +L G+Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 314 SQVIQLGHDSSLSAGNALITMYAKCGVVGYAD---MVFLTMPYVDSVSWNAMIAALAQH- 369
S I+ G + +L+ MYAKC G D VF M +SW A+I ++
Sbjct: 293 SWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Query: 370 GRGVQAIQLYEQMLKED-ILPDRITFLTILSACSH-----AGLVKEGQHYFDSMCTHYGM 423
+AI L+ +M+ + + P+ TF + AC + G GQ + + ++ +
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410
Query: 424 TPG-----------ED--------------HYARLIDLLCRAGKFSEAKKVTESMP---F 455
ED Y +D CR F +A K+ +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 456 EPSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWDEVA 513
SA + SLL+G G+I G Q ++ + L+ Q ++S MY+ G D +
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS-MYSKCGSIDTAS 529
Query: 514 RVRKLMRERGV 524
RV M R V
Sbjct: 530 RVFNFMENRNV 540
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 28/273 (10%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
++P +I+ Y + + +A ++ + M + ++W +MI+G+ +HG +TF +M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQPS-EHFILSVNNALITFYT 204
G++ +E TY +++SA + GL + G R ++ ++P EH+ ++
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA-----CMVDLLC 622
Query: 205 KCGKLVQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPE--RNLLTWTVM 261
+ G L A E + MP + D++ W L E K R++ E N +
Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 262 ISGL-AESGFGEESLKLFNQMKSEGLEP---CDYAYAGAIKACGVLGSL--DNGQQIHSQ 315
+S + A +G EES ++ +MK L C + G +G N QI+ +
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDE 742
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
+ + LIT +CG V D+V
Sbjct: 743 L------------DRLITEIKRCGYVPDTDLVL 763
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 320/574 (55%), Gaps = 40/574 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++ Y + +++ +R++L M VAWNA+I GY ++A F+ M G+
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 152 MDEYTYTSLISASFNTG-LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ T S++SA G L G+ LHAY++ + EH V N+LIT Y KCG L
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH----VKNSLITMYAKCGDLS 516
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
++++F+ + R++++WNA M++ A G
Sbjct: 517 SSQDLFNGLDNRNIITWNA-------------------------------MLAANAHHGH 545
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
GEE LKL ++M+S G+ ++++ + A L L+ GQQ+H ++LG + NA
Sbjct: 546 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 605
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSV--SWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
MY+KCG +G ++V + P V+ SWN +I+AL +HG + + +ML+ I
Sbjct: 606 AADMYSKCGEIG--EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 663
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
P +TF+++L+ACSH GLV +G Y+D + +G+ P +H +IDLL R+G+ +EA+
Sbjct: 664 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 723
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
MP +P+ +W SLLA C+IHGN++ G +AAE L +L PE D Y++ SNM+A G+
Sbjct: 724 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 783
Query: 509 WDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
W++V VRK M + +KK+ CSW+++++ V F + D HP+ +Y LE + +++
Sbjct: 784 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 843
Query: 569 LGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNA 628
GY+ DT L D + E KEH L HSE+LA+ Y ++ P G+T+R+FKNLR+C DCH+
Sbjct: 844 SGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 903
Query: 629 FKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
+KF+S+ G CSC +YW
Sbjct: 904 YKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 179/371 (48%), Gaps = 38/371 (10%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + + AR L D M V+WN M+SG VR GLY E + FRKM +GI+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 158 TSLISASFNTG-LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 216
SL++A +G +F G Q+H +V ++ + + V+ A++ Y G + +R+VF
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY----VSTAILHLYGVYGLVSCSRKVF 117
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
++M P+RN+++WT ++ G ++ G EE +
Sbjct: 118 EEM-------------------------------PDRNVVSWTSLMVGYSDKGEPEEVID 146
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
++ M+ EG+ + + + I +CG+L G+QI QV++ G +S L+ N+LI+M
Sbjct: 147 IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLG 206
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
G V YA+ +F M D++SWN++ AA AQ+G ++ +++ M + + T T
Sbjct: 207 SMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVST 266
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
+LS H K G+ + G L+ + AG+ EA V + MP +
Sbjct: 267 LLSVLGHVDHQKWGRG-IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 325
Query: 457 PSAPIWESLLA 467
W SL+A
Sbjct: 326 DLIS-WNSLMA 335
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 197/477 (41%), Gaps = 81/477 (16%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+R + + ST+L + + ++W + +H VVK G V V NTLL Y
Sbjct: 252 MRRFHDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S EA L K P+ DL +
Sbjct: 311 RSV----------------EANLVFKQMPT-----------KDL---------------I 328
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+WN++++ +V G +A M S G ++ T+TS ++A F F GR LH V
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
V + + NAL++ Y K G++ ++R
Sbjct: 389 ----VVSGLFYNQIIGNALVSMYGKIGEMSESRR-------------------------- 418
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+ ++P R+++ W +I G AE +++L F M+ EG+ + AC
Sbjct: 419 -----VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Query: 301 GVLGSL-DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
+ G L + G+ +H+ ++ G +S N+LITMYAKCG + + +F + + ++W
Sbjct: 474 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 533
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
NAM+AA A HG G + ++L +M + D+ +F LSA + +++EGQ +
Sbjct: 534 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAV 592
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
G + D+ + G+ E K+ S P W L++ HG E
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 648
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 181/407 (44%), Gaps = 41/407 (10%)
Query: 88 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 147
E S +M+ G + N D A+ + D M+ ++WN++ + Y ++G EE+F F M
Sbjct: 198 ENSLISML-GSMGNVDYANY--IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 148 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 207
+++ T ++L+S + GR +H V++ ++ V N L+ Y G
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS----VVCVCNTLLRMYAGAG 310
Query: 208 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
+ V+A VF +MP +DL+SWN++++ ++N R +A
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA------------------------ 346
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
L L M S G + A+ AC + G+ +H V+ G +
Sbjct: 347 -------LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
GNAL++MY K G + + V L MP D V+WNA+I A+ +A+ ++ M E +
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
+ IT +++LSAC G + E + G E LI + + G S ++
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIE--LGIQAAERLFELTPEQ 492
+ + + W ++LA HG+ E L + + R F ++ +Q
Sbjct: 520 DLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 565
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
++ +RK+ + M V+W +++ GY G EE D ++ M G+ +E + + +IS+
Sbjct: 110 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
+ GRQ+ V+++ ++ L+V N+LI+ G +
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESK----LAVENSLISMLGSMGNV-------------- 211
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+ A +IF ++ ER+ ++W + + A++G EES ++F+ M+
Sbjct: 212 -----------------DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDN---GQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
E + + VLG +D+ G+ IH V+++G DS + N L+ MYA G
Sbjct: 255 FHDEVNSTTVSTLLS---VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 311
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
A++VF MP D +SWN+++A+ GR + A+ L M+ + +TF + L+A
Sbjct: 312 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
C ++G+ + G+ + L+ + + G+ SE+++V MP
Sbjct: 372 CFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVV 429
Query: 461 IWESLLAG 468
W +L+ G
Sbjct: 430 AWNALIGG 437
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 136/307 (44%), Gaps = 40/307 (13%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
+ DE ++I Y + DL+S++ L +G+ + + WNAM++ HG EE K
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
M S G+ +D+++++ +SA+ + G+QLH ++ + + FI NA Y+
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE-HDSFIF---NAAADMYS 611
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
KCG++ + ++ R L SWN ++IS
Sbjct: 612 KCGEIGEVVKMLPPSVNRSLPSWN-------------------------------ILISA 640
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ-LGHDS 323
L G+ EE F++M G++P + + AC G +D G + + + G +
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHG---RGVQAIQLY 379
++ +I + + G + A+ MP + + W +++A+ HG RG +A +
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 760
Query: 380 EQMLKED 386
++ ED
Sbjct: 761 SKLEPED 767
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
MY K G V A +F MP + VSWN M++ + + G ++ ++ + +M I P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 394 FLTILSACSHAG-LVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
++++AC +G + +EG G+ ++ L G S ++KV E
Sbjct: 61 IASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 453 MPFEPSAPIWESLLAGCRIHGNIE 476
MP + + W SL+ G G E
Sbjct: 120 MP-DRNVVSWTSLMVGYSDKGEPE 142
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 323/572 (56%), Gaps = 37/572 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I Y + + AR++ DGM V+WN MI Y R+ + EA D F +M + G +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 152 MDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
E+T +S++SA N C ++LH ++T + + L V AL+ Y KCG +
Sbjct: 160 FSEFTISSVLSACGVNCDALEC-KKLHCLSVKTCIDLN----LYVGTALLDLYAKCGMIK 214
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A +VF+ M +++ +TW+ M++G ++
Sbjct: 215 DAVQVFESMQ-------------------------------DKSSVTWSSMVAGYVQNKN 243
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
EE+L L+ + + LE + + I AC L +L G+Q+H+ + + G S++ ++
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
+ MYAKCG + + ++F + + WN +I+ A+H R + + L+E+M ++ + P+
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+TF ++LS C H GLV+EG+ +F M T YG++P HY+ ++D+L RAG SEA ++
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
+S+PF+P+A IW SLLA CR++ N+EL AAE+LFEL PE G +++LSN+YA +W+
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
E+A+ RKL+R+ VKK G SWI+I++ VH F V ++ HP + + L+ LVI+ RK G
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Query: 571 YIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFK 630
Y P + LHD+E KE L HSEKLA+V+G++ LP + +R+ KNLR+C DCH K
Sbjct: 544 YKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMK 603
Query: 631 FISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
S +G CSCG++W
Sbjct: 604 AASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 149/304 (49%), Gaps = 13/304 (4%)
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
D+ N +++ Y +E A+ +F + ER+L++W MI + E+L +F +M+
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG 342
+EG + ++ + + ACGV +++H ++ D +L G AL+ +YAKCG++
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
A VF +M SV+W++M+A Q+ +A+ LY + + + ++ T +++ ACS
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
+ + EG+ +C G + +D+ + G E+ + + E + +W
Sbjct: 275 NLAALIEGKQMHAVICKS-GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELW 332
Query: 463 ESLLAGCRIHGNIELGIQAAERLFELTPEQDG------TYIILSNMYAHLGKWDEVARVR 516
++++G H + + E++ +QDG T+ L ++ H G +E R
Sbjct: 333 NTIISGFAKHARPKEVMILFEKM-----QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF 387
Query: 517 KLMR 520
KLMR
Sbjct: 388 KLMR 391
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 52/317 (16%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ +GF F+ S+VL A + + C++LHC VK + V LL Y C
Sbjct: 153 MRNEGFKFSEFTISSVLSACG-VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 211
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
++ A ++F+ + K +W++M+AGYV+N +
Sbjct: 212 ---------MIKDAVQVFE--SMQDKSSVTWSSMVAGYVQNKN----------------- 243
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
YEEA +R+ M ++ +++T +S+I A N G+Q+HA +
Sbjct: 244 --------------YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI 289
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++ S F+ S + + Y KCG L ++ +F ++ ++L WN I+SG+ R
Sbjct: 290 CKSGF-GSNVFVAS---SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 241 EEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAG 295
+E +F ++ + N +T++ ++S +G EE + F M++ GL P Y+
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 296 AIKACGVLGSLDNGQQI 312
+ G G L ++
Sbjct: 406 MVDILGRAGLLSEAYEL 422
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
++ C G++ + H ++I++ + ++ N LI Y+KCG V A VF M
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS---HAGLVKEGQHY 413
VSWN MI ++ +A+ ++ +M E T ++LSAC A K+
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 414 FDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
C + G L+DL + G +A +V ESM + S+ W S++AG +
Sbjct: 188 SVKTCIDLNLYVG----TALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNK 242
Query: 474 NIELGIQAAERLFELTPEQD 493
N E + R ++ EQ+
Sbjct: 243 NYEEALLLYRRAQRMSLEQN 262
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 325/571 (56%), Gaps = 5/571 (0%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ ++ Y++ + + A++L D NAM S YVR GL EA F M G++
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D + S IS+ G+ H YVLR + ++ + NALI Y KC +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN----ICNALIDMYMKCHRQDT 390
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +FD+M + +V+WN+I++GY+ ++ A F +PE+N+++W +ISGL +
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 272 EESLKLFNQMKS-EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
EE++++F M+S EG+ ACG LG+LD + I+ + + G + G
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+ M+++CG A +F ++ D +W A I A+A G +AI+L++ M+++ + PD
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+ F+ L+ACSH GLV++G+ F SM +G++P + HY ++DLL RAG EA ++
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
E MP EP+ IW SLLA CR+ GN+E+ AAE++ L PE+ G+Y++LSN+YA G+W+
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
++A+VR M+E+G++K PG S I+I H F D HPE+ + L+++ LG
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
Query: 571 YIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFK 630
++PD VL D++ + K LS HSEKLA+ YG++ G TIR+ KNLR+C DCH+ K
Sbjct: 751 HVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAK 810
Query: 631 FISKXXXXXXXXXXXXXXXXXXNGECSCGNY 661
F SK G+CSCG++
Sbjct: 811 FASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 176/384 (45%), Gaps = 64/384 (16%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
+N++I GY GL EA F +M + GI D+YT+ +SA + G Q+H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+ L V N+L+ FY +CG+L AR+VFD+M R++VSW +++ GY ARR
Sbjct: 162 KMGYAKD----LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGY--ARR-- 213
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKAC 300
F ++++ LF +M + E + P I AC
Sbjct: 214 ---------------------------DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
L L+ G+++++ + G + + +AL+ MY KC + A +F + N
Sbjct: 247 AKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCN 306
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS-----------HAGLVKE 409
AM + + G +A+ ++ M+ + PDRI+ L+ +S+CS H +++
Sbjct: 307 AMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 366
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
G +D++C LID+ + + A ++ + M + W S++AG
Sbjct: 367 GFESWDNICNA------------LIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGY 413
Query: 470 RIHGNIELGIQAAERLFELTPEQD 493
+G ++ AA FE PE++
Sbjct: 414 VENGEVD----AAWETFETMPEKN 433
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 183/449 (40%), Gaps = 76/449 (16%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT-FRK 144
KD +++ Y +L SARK+ D M+ V+W +MI GY R ++A D FR
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
+ + + T +ISA G +++A++ + ++ ++ + +AL+ Y
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV----SALVDMYM 282
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
KC + A+ +FD+ +L NA+ S Y+
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYV----------------------------- 313
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
G E+L +FN M G+ P + AI +C L ++ G+ H V++ G +S
Sbjct: 314 --RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 325 LSAGNALITMYAKCG-----------------------VVGYADM--------VFLTMPY 353
+ NALI MY KC V GY + F TMP
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILSACSHAG---LVKE 409
+ VSWN +I+ L Q +AI+++ M +E + D +T ++I SAC H G L K
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
+Y + + G L+D+ R G A + S+ W + +
Sbjct: 492 IYYYIEKNGIQLDVRLG----TTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAM 546
Query: 470 RIHGNIELGIQAAERLFELTPEQDGTYII 498
+ GN E I+ + + E + DG +
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 178/402 (44%), Gaps = 52/402 (12%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M G PD S + + + S + W + H V++ G ++ N L+ Y+ C
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWG-KSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+A ++FD +S K +W +++AGYV N ++ +A + + M V
Sbjct: 387 RQD---------TAFRIFDR--MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
+WN +ISG V+ L+EEA + F M S G+ D T S+ SA + G + + ++ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+ + +Q + + L+ +++CG A +F+ + RD+ +
Sbjct: 496 IEKNGIQ----LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA------------- 538
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
WT I +A +G E +++LF+ M +GL+P A+ GA+ A
Sbjct: 539 ------------------WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 300 CGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSV 357
C G + G++I +++L G ++ + + G++ A + MP + V
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
WN+++AA G A E++ + + P+R +LS
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKI--QVLAPERTGSYVLLS 680
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/564 (35%), Positives = 312/564 (55%), Gaps = 16/564 (2%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
AR++++ + W A+I GY G ++EA + M I +T+++L+ A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
N GRQ HA R + V N +I Y KC + AR+VFD+MP RD++S
Sbjct: 162 MKDLNLGRQFHAQTFRL----RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS 217
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL 286
W +++ Y +E A +F +P ++++ WT M++G A++ +E+L+ F++M+ G+
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
Query: 287 EPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA------GNALITMYAKCGV 340
+ AG I AC LG+ + + +Q+ S S G+ALI MY+KCG
Sbjct: 278 RADEVTVAGYISACAQLGA----SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGN 333
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILS 399
V A VF++M + ++++MI LA HGR +A+ L+ M+ + +I P+ +TF+ L
Sbjct: 334 VEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALM 393
Query: 400 ACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSA 459
ACSH+GLV +G+ FDSM +G+ P DHY ++DLL R G+ EA ++ ++M EP
Sbjct: 394 ACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHG 453
Query: 460 PIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLM 519
+W +LL CRIH N E+ AAE LFEL P+ G YI+LSN+YA G W V RVRKL+
Sbjct: 454 GVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLI 513
Query: 520 RERGVKKEPGCSWIEIEN-MVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFV 578
+E+G+KK P SW+ +N +H F + HP + + LE+LV + LGY PD V
Sbjct: 514 KEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSV 573
Query: 579 LHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXX 638
+D+ K L H+EKLA+ + +L +TI + KNLRMC DCH + S+
Sbjct: 574 PYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGK 633
Query: 639 XXXXXXXXXXXXXXNGECSCGNYW 662
+G+CSCG++W
Sbjct: 634 VIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 185/416 (44%), Gaps = 58/416 (13%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+++ P F+FS +L A + + +Q H + C V NT++ Y+ C
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLG-RQFHAQTFRLRGFCFVYVGNTMIDMYVKCE 198
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S + ARK+FDE P ++D SWT +IA Y R ++ A +L + + V
Sbjct: 199 S---------IDCARKVFDEMP--ERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
AW AM++G+ ++ +EA + F +M GI+ DE T ISA G +
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++ PS+H + + +ALI Y+KCG + +A VF M +++ ++++
Sbjct: 308 QKSGYSPSDHVV--IGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSS----------- 354
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKA 299
MI GLA G +E+L LF+ M ++ ++P + GA+ A
Sbjct: 355 --------------------MILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Query: 300 CGVLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTM---PYVD 355
C G +D G+Q+ + Q G + ++ + + G + A + TM P+
Sbjct: 395 CSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPH-- 452
Query: 356 SVSWNAMIAALAQHGRG----VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
W A++ A H + A L+E L+ DI+ + I + ++ G V
Sbjct: 453 GGVWGALLGACRIHNNPEIAEIAAEHLFE--LEPDIIGNYILLSNVYASAGDWGGV 506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 96/233 (41%), Gaps = 23/233 (9%)
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV--GYADMVFLTMPYVDSVSWNAM 362
+L+ +QIH V++ G D S LI K GV YA V + + + W A+
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHY------FDS 416
I A G+ +AI +Y M KE+I P TF +L AC + G+ +
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 417 MCTHY-GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
C Y G T +ID+ + A+KV + MP E W L+A GN+
Sbjct: 181 FCFVYVGNT--------MIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAYARVGNM 231
Query: 476 ELGIQAAERLFELTPEQDGT-YIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
E A LFE P +D + + +A K E M + G++ +
Sbjct: 232 E----CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/560 (36%), Positives = 302/560 (53%), Gaps = 36/560 (6%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
++ AR L + M+ P V +N+M GY R E F F ++ GI D YT+ SL+ A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
GRQLH ++ + + + V LI YT+C + AR VFD++
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVY----VCPTLINMYTECEDVDSARCVFDRIVEPC 194
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+V +NA MI+G A E+L LF +M+
Sbjct: 195 VVCYNA-------------------------------MITGYARRNRPNEALSLFREMQG 223
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
+ L+P + + +C +LGSLD G+ IH + + ALI M+AKCG +
Sbjct: 224 KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDD 283
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
A +F M Y D+ +W+AMI A A HG+ +++ ++E+M E++ PD ITFL +L+ACSH
Sbjct: 284 AVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSH 343
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWE 463
G V+EG+ YF M + +G+ P HY ++DLL RAG +A + + +P P+ +W
Sbjct: 344 TGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWR 403
Query: 464 SLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERG 523
LLA C H N++L + +ER+FEL G Y+ILSN+YA KW+ V +RK+M++R
Sbjct: 404 ILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRK 463
Query: 524 VKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLH-DM 582
K PGCS IE+ N+VH F D V +++ L+++V E++ GY+PDT V+H +M
Sbjct: 464 AVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANM 523
Query: 583 ESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXX 642
+ KE L HSEKLA+ +G+L P G TIRV KNLR+C DCHNA K IS
Sbjct: 524 NDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVL 583
Query: 643 XXXXXXXXXXNGECSCGNYW 662
+G+CSCG++W
Sbjct: 584 RDVQRFHHFEDGKCSCGDFW 603
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 167/385 (43%), Gaps = 80/385 (20%)
Query: 4 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 63
DG PD ++F ++L A + +A+ +QLHC +K G+ + Y+C
Sbjct: 123 DGILPDNYTFPSLLKACA-VAKALEEGRQLHCLSMKLGLD---------DNVYVC----- 167
Query: 64 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 123
T+I Y +D+ SAR + D + P V +N
Sbjct: 168 ----------------------------PTLINMYTECEDVDSARCVFDRIVEPCVVCYN 199
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
AMI+GY R EA FR+M ++ +E T S++S+ G + G+ +H Y +
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 243
S + VN ALI + KCG L A +F+KM +D +W+A++ Y N
Sbjct: 260 ----SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYAN------- 308
Query: 244 KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVL 303
G E+S+ +F +M+SE ++P + + G + AC
Sbjct: 309 ------------------------HGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 304 GSLDNGQQIHSQVI-QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS-VSWNA 361
G ++ G++ SQ++ + G S+ +++ + ++ G + A +P + + W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 362 MIAALAQHGRGVQAIQLYEQMLKED 386
++AA + H A ++ E++ + D
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELD 429
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/605 (36%), Positives = 313/605 (51%), Gaps = 41/605 (6%)
Query: 64 LVESPVLMASARKL-FDEAPLSQK-----DEPSWTTMIAGYVRNDDLASARKLLDGMTHP 117
LV AS+RKL D L K D + T++++ Y + L A KL D +
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR 175
Query: 118 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 177
V W A+ SGY G + EA D F+KM MG++ D Y ++SA + G + G +
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 178 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
Y+ +Q + V L+ Y KCGK+ +AR V
Sbjct: 236 KYMEEMEMQKNSF----VRTTLVNLYAKCGKMEKARSV---------------------- 269
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
F + E++++TW+ MI G A + F +E ++LF QM E L+P ++ G +
Sbjct: 270 ---------FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
+C LG+LD G+ S + + ++L NALI MYAKCG + VF M D V
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
NA I+ LA++G + ++ Q K I PD TFL +L C HAGL+++G +F+++
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIEL 477
Y + +HY ++DL RAG +A ++ MP P+A +W +LL+GCR+ + +L
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 478 GIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIEN 537
+ L L P G Y+ LSN+Y+ G+WDE A VR +M ++G+KK PG SWIE+E
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 538 MVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEK 597
VH FL DD HP +Y LE L EMR +G++P T+FV D+E E KE L HSEK
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEK 620
Query: 598 LAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECS 657
LAV G++ G IRV KNLR+CGDCH K ISK NG CS
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 658 CGNYW 662
C +YW
Sbjct: 681 CNDYW 685
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 9/287 (3%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N +L + R+ + + +F N+ + +I+G + E+L LF ++ GL
Sbjct: 49 NLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY 108
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
+ + +KAC S G +HS V++ G + ++A +L+++Y+ G + A +
Sbjct: 109 LHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKL 168
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F +P V+W A+ + GR +AI L+++M++ + PD + +LSAC H G +
Sbjct: 169 FDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDL 228
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYAR--LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESL 465
G+ M M ++ + R L++L + GK +A+ V +SM E W ++
Sbjct: 229 DSGEWIVKYM---EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTM 284
Query: 466 LAGCRIHGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWD 510
+ G + + GI+ ++ + L P+Q LS+ A LG D
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC-ASLGALD 330
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/562 (36%), Positives = 310/562 (55%), Gaps = 38/562 (6%)
Query: 104 LASARKLLDGMTHPIAV-AWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLI 161
++ A K+ + PI V WN +I GY G AF +R+M G ++ D +TY LI
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
A G +H+ V+R+ ++ V N+L+ Y CG + A +VFDKMP
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGS----LIYVQNSLLHLYANCGDVASAYKVFDKMPE 184
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
+DLV+WN++++G+ AE+G EE+L L+ +M
Sbjct: 185 KDLVAWNSVINGF-------------------------------AENGKPEEALALYTEM 213
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
S+G++P + + AC +G+L G+++H +I++G +L + N L+ +YA+CG V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILSA 400
A +F M +SVSW ++I LA +G G +AI+L++ M E +LP ITF+ IL A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
CSH G+VKEG YF M Y + P +H+ ++DLL RAG+ +A + +SMP +P+
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
IW +LL C +HG+ +L A ++ +L P G Y++LSNMYA +W +V ++RK M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 521 ERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLH 580
GVKK PG S +E+ N VH FL+ D HP+ A+Y L+++ +R GY+P V
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 581 DMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXX 640
D+E E KE+A+ HSEK+A+ + ++ P + I V KNLR+C DCH A K +SK
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 641 XXXXXXXXXXXXNGECSCGNYW 662
NG CSC +YW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 136/276 (49%), Gaps = 38/276 (13%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y D+ASA K+ D M VAWN++I+G+ +G EEA + +M+S GI+ D +T
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
SL+SA G G+++H Y+++ + + H +N L+ Y +CG++ +A+ +FD
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH----SSNVLLDLYARCGRVEEAKTLFD 281
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+M ++ VS WT +I GLA +GFG+E+++L
Sbjct: 282 EMVDKNSVS-------------------------------WTSLIVGLAVNGFGKEAIEL 310
Query: 278 FNQMKS-EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI-QLGHDSSLSAGNALITMY 335
F M+S EGL PC+ + G + AC G + G + ++ + + + ++ +
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 336 AKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQHG 370
A+ G V A +MP +V W ++ A HG
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/548 (36%), Positives = 312/548 (56%), Gaps = 10/548 (1%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P + A I+ +GL ++AF + ++ S I +E+T++SL+ + G+ +
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLI 148
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H +VL+ + + V L+ Y K G +V A++VFD+MP R LVS A+++ Y
Sbjct: 149 HTHVLKFGLGIDPY----VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 204
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL-EPCDYAYAG 295
+E A+ +F + ER++++W VMI G A+ GF ++L LF ++ +EG +P +
Sbjct: 205 QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVA 264
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
A+ AC +G+L+ G+ IH V ++ LI MY+KCG + A +VF P D
Sbjct: 265 ALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 324
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLK-EDILPDRITFLTILSACSHAGLVKEGQHYF 414
V+WNAMIA A HG A++L+ +M + P ITF+ L AC+HAGLV EG F
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+SM YG+ P +HY L+ LL RAG+ A + ++M + + +W S+L C++HG+
Sbjct: 385 ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Query: 475 IELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
LG + AE L L + G Y++LSN+YA +G ++ VA+VR LM+E+G+ KEPG S IE
Sbjct: 445 FVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIE 504
Query: 535 IENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTH 594
IEN VH F D H + +Y L ++ ++ GY+P+T VL D+E KE +L H
Sbjct: 505 IENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVH 564
Query: 595 SEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNG 654
SE+LA+ YG++ G+ +++FKNLR+C DCH K ISK +G
Sbjct: 565 SERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDG 624
Query: 655 ECSCGNYW 662
CSCG++W
Sbjct: 625 SCSCGDFW 632
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 181/384 (47%), Gaps = 55/384 (14%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
P+ F+FS++L + S + + +H V+K+G+ P V L+ Y
Sbjct: 128 PNEFTFSSLLKSCSTKS-----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD------ 176
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 127
+ SA+K+FD P ++ S T MI Y + ++ +AR L D M V+WN MI
Sbjct: 177 ---VVSAQKVFDRMP--ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMID 231
Query: 128 GYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 186
GY +HG +A F+K+ + G + DE T + +SA G GR +H +V + ++
Sbjct: 232 GYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIR 291
Query: 187 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 246
+ + V LI Y+KCG L +A VF+ P +D+V+WNA+++GY
Sbjct: 292 LN----VKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY------------ 335
Query: 247 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS-EGLEPCDYAYAGAIKACGVLGS 305
A G+ +++L+LFN+M+ GL+P D + G ++AC G
Sbjct: 336 -------------------AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Query: 306 LDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMI 363
++ G +I + Q G + L+++ + G + A M DSV W++++
Sbjct: 377 VNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVL 436
Query: 364 AALAQHGRGVQAIQLYEQMLKEDI 387
+ HG V ++ E ++ +I
Sbjct: 437 GSCKLHGDFVLGKEIAEYLIGLNI 460
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 312/573 (54%), Gaps = 37/573 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + D L ARK+LD M V+W AMIS Y + G EA F +M +
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+E+T+ +++++ G+Q+H +++ H V ++L+ Y K G++
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKW--NYDSHIF--VGSSLLDMYAKAGQI-- 204
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+EA+ IF +PER++++ T +I+G A+ G
Sbjct: 205 -----------------------------KEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EE+L++F+++ SEG+ P YA + A L LD+G+Q H V++ N+L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED-ILPD 390
I MY+KCG + YA +F MP ++SWNAM+ ++HG G + ++L+ M E + PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCT-HYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
+T L +LS CSH + G + FD M YG PG +HY ++D+L RAG+ EA +
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
+ MP +P+A + SLL CR+H ++++G RL E+ PE G Y+ILSN+YA G+W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 510 DEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
+V VR +M ++ V KEPG SWI+ E +H F +D HP V ++++ I+M++
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 570 GYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAF 629
GY+PD VL+D++ E KE L HSEKLA+ +G++ G IRVFKNLR+C DCHN
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 630 KFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K SK +G CSCG+YW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 247 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSL 306
F P +L + IS L +G +E+L +M G E + Y + AC +L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 307 DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAAL 366
+GQ++H+ +I+ + + L+ Y KC + A V MP + VSW AMI+
Sbjct: 69 RDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPG 426
+Q G +A+ ++ +M++ D P+ TF T+L++C A + G+ + +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ-IHGLIVKWNYDSH 187
Query: 427 EDHYARLIDLLCRAGKFSEAKKVTESMP 454
+ L+D+ +AG+ EA+++ E +P
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLP 215
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 311/571 (54%), Gaps = 40/571 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I YV+ + L A +L D M ++W MIS Y + ++++A + M ++
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ YTY+S++ + G+ + R LH +++ ++ S+ F+ S ALI + K G+
Sbjct: 160 PNVYTYSSVLRSC--NGMSDV-RMLHCGIIKEGLE-SDVFVRS---ALIDVFAKLGEPED 212
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A VFD+M D + W +I G A++
Sbjct: 213 ALSVFDEMVTGDAI-------------------------------VWNSIIGGFAQNSRS 241
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
+ +L+LF +MK G ++AC L L+ G Q H +++ +D L NAL
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNAL 299
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MY KCG + A VF M D ++W+ MI+ LAQ+G +A++L+E+M P+
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
IT + +L ACSHAGL+++G +YF SM YG+ P +HY +IDLL +AGK +A K+
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
M EP A W +LL CR+ N+ L AA+++ L PE GTY +LSN+YA+ KWD
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGY 571
V +R MR+RG+KKEPGCSWIE+ +H F++ D HP++ V K L QL+ + +GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 572 IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKF 631
+P+T FVL D+E E E +L HSEKLA+ +G++ LP+ IR+ KNLR+CGDCH K
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 632 ISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
SK +G+CSCG+YW
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 69/301 (22%)
Query: 273 ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
++K + ++S GL Y+ IK C ++ G I + GH + N LI
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
MY K ++ A +F MP + +SW MI+A ++ +A++L ML++++ P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 393 TFLTILSACS--------HAGLVKEGQHYFDSMCTHYGMTPGEDHYAR--LIDLLCRAGK 442
T+ ++L +C+ H G++KEG D + R LID+ + G+
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKEGLE--------------SDVFVRSALIDVFAKLGE 209
Query: 443 FSEAKKVTESMPFEPSAPIWESLLAG---------------------------------- 468
+A V + M A +W S++ G
Sbjct: 210 PEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 469 -CRIHGNIELGIQAAERLFELTPEQDGTYIILSN----MYAHLGKWDEVARVRKLMRERG 523
C +ELG+QA + + +QD +IL+N MY G ++ RV M+ER
Sbjct: 269 ACTGLALLELGMQAHVHIVKY--DQD---LILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 524 V 524
V
Sbjct: 324 V 324
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 311/571 (54%), Gaps = 36/571 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + L +AR+L DGM V+WN+MI YV++ +EA F+KM G++
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ + + A + G GR +H + V+ +SV N+LI+ Y KC
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIH----KLSVELGLDRNVSVVNSLISMYCKC----- 385
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+ ++ A +F ++ R L++W MI G A++G
Sbjct: 386 --------------------------KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
++L F+QM+S ++P + Y I A L + + IH V++ D ++ AL
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MYAKCG + A ++F M +WNAMI HG G A++L+E+M K I P+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+TFL+++SACSH+GLV+ G F M +Y + DHY ++DLL RAG+ +EA
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
MP +P+ ++ ++L C+IH N+ +AAERLFEL P+ G +++L+N+Y W++
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEK 659
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGY 571
V +VR M +G++K PGCS +EI+N VH F HP+ +Y +LE+L+ +++ GY
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGY 719
Query: 572 IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKF 631
+PDT VL +E++ KE LSTHSEKLA+ +G+L G TI V KNLR+C DCHNA K+
Sbjct: 720 VPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778
Query: 632 ISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
IS NG CSCG+YW
Sbjct: 779 ISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 204/425 (48%), Gaps = 38/425 (8%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + + ARK+ D M V+WN +++GY ++G+ A + + M ++ T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
S++ A L + G+++H Y +R+ +++++ AL+ Y KCG L AR++FD
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDS----LVNISTALVDMYAKCGSLETARQLFD 295
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
M R++VSWN+++ Y+ +EA IF+
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQ----------------------------- 326
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
+M EG++P D + GA+ AC LG L+ G+ IH ++LG D ++S N+LI+MY K
Sbjct: 327 --KMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK 384
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
C V A +F + VSWNAMI AQ+GR + A+ + QM + PD T++++
Sbjct: 385 CKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSV 444
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
++A + + + + + + L+D+ + G A+ + + M E
Sbjct: 445 ITAIAELSITHHAK-WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ER 502
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHLGKWDEVARVR 516
W +++ G HG + ++ E + + T + +G T++ + + +H G + +
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 517 KLMRE 521
+M+E
Sbjct: 563 YMMKE 567
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 162/355 (45%), Gaps = 36/355 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T +++ + R + A ++ + + + V ++ M+ G+ + ++A F +M ++
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
Y +T L+ + G+++H ++++ F L
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS------GFSL------------------ 168
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
DL + + + Y R++ EA+ +F +PER+L++W +++G +++G
Sbjct: 169 -----------DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
+L++ M E L+P + A L + G++IH ++ G DS ++ AL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MYAKCG + A +F M + VSWN+MI A Q+ +A+ ++++ML E + P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
++ + L AC+ G ++ G+ + + G+ LI + C+ + A
Sbjct: 338 VSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 14/270 (5%)
Query: 205 KCGKLVQARE----VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTV 260
+C L + R+ VF ++ ++S + ++EA +F + + + +
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 261 MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
M+ G A+ +++L+ F +M+ + +EP Y + +K CG L G++IH +++ G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
L A L MYAKC V A VF MP D VSWN ++A +Q+G A+++ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR----LIDL 436
M +E++ P IT +++L A S L+ G+ Y M G D L+D+
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG-----YAMRSGFDSLVNISTALVDM 280
Query: 437 LCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
+ G A+++ + M E + W S++
Sbjct: 281 YAKCGSLETARQLFDGM-LERNVVSWNSMI 309
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 313/546 (57%), Gaps = 40/546 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++ Y + +++ +R++L M VAWNA+I GY ++A F+ M G+
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 152 MDEYTYTSLISASFNTG-LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ T S++SA G L G+ LHAY++ + EH V N+LIT Y KCG L
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH----VKNSLITMYAKCGDLS 499
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
++++F+ + R++++WNA M++ A G
Sbjct: 500 SSQDLFNGLDNRNIITWNA-------------------------------MLAANAHHGH 528
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
GEE LKL ++M+S G+ ++++ + A L L+ GQQ+H ++LG + NA
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 588
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSV--SWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
MY+KCG +G ++V + P V+ SWN +I+AL +HG + + +ML+ I
Sbjct: 589 AADMYSKCGEIG--EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 646
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
P +TF+++L+ACSH GLV +G Y+D + +G+ P +H +IDLL R+G+ +EA+
Sbjct: 647 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 706
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
MP +P+ +W SLLA C+IHGN++ G +AAE L +L PE D Y++ SNM+A G+
Sbjct: 707 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 766
Query: 509 WDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
W++V VRK M + +KK+ CSW+++++ V F + D HP+ +Y LE + +++
Sbjct: 767 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 826
Query: 569 LGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNA 628
GY+ DT L D + E KEH L HSE+LA+ Y ++ P G+T+R+FKNLR+C DCH+
Sbjct: 827 SGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSV 886
Query: 629 FKFISK 634
+KF+S+
Sbjct: 887 YKFVSR 892
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 171/349 (48%), Gaps = 38/349 (10%)
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG-LFNCGRQLHA 178
V+WN M+SG VR GLY E + FRKM +GI+ + SL++A +G +F G Q+H
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 66
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
+V ++ + + V+ A++ Y G + +R+VF++M
Sbjct: 67 FVAKSGLLSDVY----VSTAILHLYGVYGLVSCSRKVFEEM------------------- 103
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
P+RN+++WT ++ G ++ G EE + ++ M+ EG+ + + + I
Sbjct: 104 ------------PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVIS 151
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
+CG+L G+QI QV++ G +S L+ N+LI+M G V YA+ +F M D++S
Sbjct: 152 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS 211
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
WN++ AA AQ+G ++ +++ M + + T T+LS H K G+ +
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG-IHGLV 270
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
G L+ + AG+ EA V + MP + W SL+A
Sbjct: 271 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMA 318
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 197/477 (41%), Gaps = 81/477 (16%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+R + + ST+L + + ++W + +H VVK G V V NTLL Y
Sbjct: 235 MRRFHDEVNSTTVSTLLSVLGHVDHQKWG-RGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S EA L K P+ DL +
Sbjct: 294 RSV----------------EANLVFKQMPT-----------KDL---------------I 311
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+WN++++ +V G +A M S G ++ T+TS ++A F F GR LH V
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
V + + NAL++ Y K G++ ++R
Sbjct: 372 ----VVSGLFYNQIIGNALVSMYGKIGEMSESRR-------------------------- 401
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+ ++P R+++ W +I G AE +++L F M+ EG+ + AC
Sbjct: 402 -----VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Query: 301 GVLGSL-DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
+ G L + G+ +H+ ++ G +S N+LITMYAKCG + + +F + + ++W
Sbjct: 457 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITW 516
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
NAM+AA A HG G + ++L +M + D+ +F LSA + +++EGQ +
Sbjct: 517 NAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-LHGLAV 575
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
G + D+ + G+ E K+ S P W L++ HG E
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFE 631
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 181/407 (44%), Gaps = 41/407 (10%)
Query: 88 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 147
E S +M+ G + N D A+ + D M+ ++WN++ + Y ++G EE+F F M
Sbjct: 181 ENSLISML-GSMGNVDYANY--IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 148 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 207
+++ T ++L+S + GR +H V++ ++ V N L+ Y G
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS----VVCVCNTLLRMYAGAG 293
Query: 208 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
+ V+A VF +MP +DL+SWN++++ ++N R +A
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDA------------------------ 329
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
L L M S G + A+ AC + G+ +H V+ G +
Sbjct: 330 -------LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
GNAL++MY K G + + V L MP D V+WNA+I A+ +A+ ++ M E +
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 442
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
+ IT +++LSAC G + E + G E LI + + G S ++
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 502
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIE--LGIQAAERLFELTPEQ 492
+ + + W ++LA HG+ E L + + R F ++ +Q
Sbjct: 503 DLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 548
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
++ +RK+ + M V+W +++ GY G EE D ++ M G+ +E + + +IS+
Sbjct: 93 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
+ GRQ+ V+++ ++ L+V N+LI+ G +
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESK----LAVENSLISMLGSMGNV-------------- 194
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+ A +IF ++ ER+ ++W + + A++G EES ++F+ M+
Sbjct: 195 -----------------DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDN---GQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
E + + VLG +D+ G+ IH V+++G DS + N L+ MYA G
Sbjct: 238 FHDEVNSTTVSTLLS---VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 294
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
A++VF MP D +SWN+++A+ GR + A+ L M+ + +TF + L+A
Sbjct: 295 SVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
C ++G+ + G+ + L+ + + G+ SE+++V MP
Sbjct: 355 CFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVV 412
Query: 461 IWESLLAG 468
W +L+ G
Sbjct: 413 AWNALIGG 420
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 136/307 (44%), Gaps = 40/307 (13%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
+ DE ++I Y + DL+S++ L +G+ + + WNAM++ HG EE K
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
M S G+ +D+++++ +SA+ + G+QLH ++ + + FI NA Y+
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE-HDSFIF---NAAADMYS 594
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
KCG++ + ++ R L SWN ++IS
Sbjct: 595 KCGEIGEVVKMLPPSVNRSLPSWN-------------------------------ILISA 623
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ-LGHDS 323
L G+ EE F++M G++P + + AC G +D G + + + G +
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHG---RGVQAIQLY 379
++ +I + + G + A+ MP + + W +++A+ HG RG +A +
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 743
Query: 380 EQMLKED 386
++ ED
Sbjct: 744 SKLEPED 750
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 250 VPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSL-DN 308
+P RN ++W M+SG+ G E ++ F +M G++P + A + ACG GS+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQ 368
G Q+H V + G S + A++ +Y G+V + VF MP + VSW +++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKE---GQHYFDSMCTHYGMTP 425
G + I +Y+ M E + + + ++S+C GL+K+ G+ + G+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS-GLES 176
Query: 426 GEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL 485
LI +L G A + + M E W S+ A +G+IE + +
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 486 FELTPEQDGTYIILSNMYAHLGKWD 510
E + T + S + + LG D
Sbjct: 236 RRFHDEVNSTTV--STLLSVLGHVD 258
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 326/612 (53%), Gaps = 45/612 (7%)
Query: 57 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 116
+CC + + + + R + D S +D T +I Y + ARK+ D
Sbjct: 85 LCCGHRSSLSDALRVH--RHILDNG--SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRK 140
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF----NTGLFNC 172
WNA+ G EE + KM+ +G++ D +TYT ++ A
Sbjct: 141 RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMK 200
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G+++HA++ R S +I++ L+ Y + G + A VF MPV
Sbjct: 201 GKEIHAHLTRRGYS-SHVYIMTT---LVDMYARFGCVDYASYVFGGMPV----------- 245
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE--PCD 290
RN+++W+ MI+ A++G E+L+ F +M E + P
Sbjct: 246 --------------------RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
++AC L +L+ G+ IH +++ G DS L +AL+TMY +CG + VF
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
M D VSWN++I++ HG G +AIQ++E+ML P +TF+++L ACSH GLV+EG
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCR 470
+ F++M +G+ P +HYA ++DLL RA + EA K+ + M EP +W SLL CR
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 471 IHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGC 530
IHGN+EL +A+ RLF L P+ G Y++L+++YA WDEV RV+KL+ RG++K PG
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 531 SWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHA 590
W+E+ ++ F+ D +P + ++ +L +L +M++ GYIP TK VL+++E+E KE
Sbjct: 526 CWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERI 585
Query: 591 LSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXX 650
+ HSEKLA+ +G++ G IR+ KNLR+C DCH KFISK
Sbjct: 586 VLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHR 645
Query: 651 XXNGECSCGNYW 662
NG CSCG+YW
Sbjct: 646 FKNGVCSCGDYW 657
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 89/222 (40%), Gaps = 32/222 (14%)
Query: 261 MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
+I L + G ++++++ +Q S P Y I CG SL + ++H ++ G
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
D LI MY+ G V YA VF WNA+ AL G G + + LY
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR-------- 432
+M + + DR T+ +L AC S CT + G++ +A
Sbjct: 168 KMNRIGVESDRFTYTYVLKAC------------VASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 433 -------LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
L+D+ R G A V MP + W +++A
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIA 256
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 315/560 (56%), Gaps = 5/560 (0%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
L A + + +P +N +I + +AF + +M I D T+ LI A
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
S G Q H+ ++R Q + V N+L+ Y CG + A +F +M RD
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQND----VYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+VSW ++++GY +E A+ +F E+P RNL TW++MI+G A++ E+++ LF MK
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
EG+ + I +C LG+L+ G++ + V++ +L G AL+ M+ +CG +
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
A VF +P DS+SW+++I LA HG +A+ + QM+ +P +TF +LSACSH
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWE 463
GLV++G +++M +G+ P +HY ++D+L RAGK +EA+ M +P+API
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 464 SLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERG 523
+LL C+I+ N E+ + L ++ PE G Y++LSN+YA G+WD++ +R +M+E+
Sbjct: 423 ALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKL 482
Query: 524 VKKEPGCSWIEIENMVHVFLV-DDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDM 582
VKK PG S IEI+ ++ F + DD HPE+ + + E+++ ++R +GY +T D+
Sbjct: 483 VKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDV 542
Query: 583 ESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXX 642
+ E KE ++ HSEKLA+ YG++K G TIR+ KNLR+C DCH K IS+
Sbjct: 543 DEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIV 602
Query: 643 XXXXXXXXXXNGECSCGNYW 662
NG CSC +YW
Sbjct: 603 RDRNRFHHFRNGVCSCRDYW 622
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 29/313 (9%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 63
PD +F ++ A S E C +Q H +V++G V N+L+ Y C
Sbjct: 115 PDNITFPFLIKASS-----EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCG--- 166
Query: 64 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 123
+A+A ++F + + +D SWT+M+AGY + + +AR++ D M H W+
Sbjct: 167 ------FIAAAGRIFGQ--MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWS 218
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
MI+GY ++ +E+A D F M G+ +E S+IS+ + G G + + YV+++
Sbjct: 219 IMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 243
+ + L + AL+ + +CG + +A VF+ +P D +SW++I+ G +A
Sbjct: 279 HMTVN----LILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 244 KFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIK 298
F ++ + T+T ++S + G E+ L+++ MK + G+EP Y +
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 299 ACGVLGSLDNGQQ 311
G G L +
Sbjct: 395 MLGRAGKLAEAEN 407
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 7/193 (3%)
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
T ++GYA +F + + +N +I + +A Y QMLK I PD I
Sbjct: 59 TFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNI 118
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
TF ++ A S V G+ S +G L+ + G + A ++
Sbjct: 119 TFPFLIKASSEMECVLVGEQT-HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 453 MPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDE 511
M F W S++AG G +E A +F+ P ++ T+ I+ N YA +++
Sbjct: 178 MGFRDVVS-WTSMVAGYCKCGMVE----NAREMFDEMPHRNLFTWSIMINGYAKNNCFEK 232
Query: 512 VARVRKLMRERGV 524
+ + M+ GV
Sbjct: 233 AIDLFEFMKREGV 245
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/573 (35%), Positives = 300/573 (52%), Gaps = 42/573 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T I+ Y + + L P VA+NAMI GY +G E + F+++ G +
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI--LSVNNALITFYTKCGKL 209
+ T SL+ S + L +H Y L++ +F+ SV+ AL T Y+K ++
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYA---IHGYCLKS------NFLSHASVSTALTTVYSKLNEI 370
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
AR++FD E PE++L +W MISG ++G
Sbjct: 371 ESARKLFD-------------------------------ESPEKSLPSWNAMISGYTQNG 399
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
E+++ LF +M+ P + AC LG+L G+ +H V +SS+
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
ALI MYAKCG + A +F M + V+WN MI+ HG+G +A+ ++ +ML I P
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITP 519
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
+TFL +L ACSHAGLVKEG F+SM YG P HYA ++D+L RAG A +
Sbjct: 520 TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
E+M EP + +WE+LL CRIH + L +E+LFEL P+ G +++LSN+++ +
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNY 639
Query: 510 DEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
+ A VR+ ++R + K PG + IEI HVF D HP+V +Y+ LE+L +MR+
Sbjct: 640 PQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREA 699
Query: 570 GYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAF 629
GY P+T+ LHD+E E +E + HSE+LA+ +G++ G IR+ KNLR+C DCH
Sbjct: 700 GYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVT 759
Query: 630 KFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K ISK +G CSCG+YW
Sbjct: 760 KLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 164/413 (39%), Gaps = 52/413 (12%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASF 165
AR + + P +N ++ G+ + + F + S ++ + TY ISA+
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 225
GR +H + VV + +L +N ++ Y K ++ AR+VFD+MP +D +
Sbjct: 131 GFRDDRAGRVIHG---QAVVDGCDSELLLGSN-IVKMYFKFWRVEDARKVFDRMPEKDTI 186
Query: 226 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
WN ++SGY E+ +FR++ + ES ++ L +
Sbjct: 187 LWNTMISGYRKNEMYVESIQVFRDL--------------INESCTRLDTTTLLD------ 226
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG---HDSSLSAGNALITMYAKCGVVG 342
+ A L L G QIHS + G HD L+ I++Y+KCG +
Sbjct: 227 ----------ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT---GFISLYSKCGKIK 273
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
+F D V++NAMI +G ++ L+++++ T ++++
Sbjct: 274 MGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG 333
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
H L+ Y C L + + + A+K+ + P E S P W
Sbjct: 334 HLMLIYAIHGY----CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP-EKSLPSW 388
Query: 463 ESLLAGCRIHGNIELGIQAAERL--FELTPEQDGTYIILSNMYA----HLGKW 509
++++G +G E I + E +P ILS LGKW
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 342/671 (50%), Gaps = 89/671 (13%)
Query: 1 MKRDGFAPDPFSFSTVLGA----MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 56
M++ GF D F+ S ++ A + LI +QLHC V G SV N ++ Y
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVDLI-------KQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 57 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 116
L E+ + +L DE
Sbjct: 184 --SKGGLLREAVSVFYGMDELRDE------------------------------------ 205
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
V+WN+MI Y +H +A +++M G ++D +T S+++A + GRQ
Sbjct: 206 ---VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H +++ + H V + LI FY+KCG
Sbjct: 263 HGKLIKAGFHQNSH----VGSGLIDFYSKCG----------------------------G 290
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLA-ESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
+ +++ +F+E+ +L+ W MISG + EE++K F QM+ G P D ++
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSS-LSAGNALITMYAKCGVVGYADMVFLTMPYV 354
AC L S +QIH I+ S+ +S NALI++Y K G + A VF MP +
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
++VS+N MI AQHG G +A+ LY++ML I P++ITF+ +LSAC+H G V EGQ YF
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYF 470
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
++M + + P +HY+ +IDLL RAGK EA++ ++MP++P + W +LL CR H N
Sbjct: 471 NTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKN 530
Query: 475 IELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
+ L +AA L + P Y++L+NMYA KW+E+A VRK MR + ++K+PGCSWIE
Sbjct: 531 MALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIE 590
Query: 535 IENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHA---L 591
++ HVF+ +D HP + V +YLE+++ +M+K+GY+ D K+ + + + L
Sbjct: 591 VKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRL 650
Query: 592 STHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXX 651
HSEKLAV +G++ G + V KNLR+CGDCHNA KF+S
Sbjct: 651 GHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCF 710
Query: 652 XNGECSCGNYW 662
+G+CSCG+YW
Sbjct: 711 KDGKCSCGDYW 721
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 170/348 (48%), Gaps = 36/348 (10%)
Query: 156 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 215
T+ L+ S G+ LHA ++++V S + ++N + Y+KCG+L AR
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTY----LSNHFVNLYSKCGRLSYARAA 65
Query: 216 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 275
F ++ S+N I+ Y ++ A+ +F E+P+ + +++ +ISG A++ ++
Sbjct: 66 FYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAM 125
Query: 276 KLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMY 335
LF +M+ G E + +G I AC +D +Q+H + G DS S NA +T Y
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 336 AKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
+K G++ A VF M + D VSWN+MI A QH G +A+ LY++M+ + D T
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 395 LTILSACS-----------HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAG-- 441
++L+A + H L+K G H +H G + LID + G
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFH----QNSHVG--------SGLIDFYSKCGGC 291
Query: 442 -KFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
+++KV + + P +W ++++G + N EL +A + ++
Sbjct: 292 DGMYDSEKVFQEI-LSPDLVVWNTMISGYSM--NEELSEEAVKSFRQM 336
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 307/571 (53%), Gaps = 38/571 (6%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHP--IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+IA Y + L SAR + +G+ P V+W A++S Y ++G EA + F +M M ++
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK 219
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D S+++A GR +HA V++ ++ ++S+N T Y KCG++
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLN----TMYAKCGQVAT 275
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A+ +FDKM NL+ W MISG A++G+
Sbjct: 276 AKILFDKMK-------------------------------SPNLILWNAMISGYAKNGYA 304
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E++ +F++M ++ + P + AI AC +GSL+ + ++ V + + + +AL
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I M+AKCG V A +VF D V W+AMI HGR +AI LY M + + P+
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+TFL +L AC+H+G+V+EG +F+ M H + P + HYA +IDLL RAG +A +V +
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
MP +P +W +LL+ C+ H ++ELG AA++LF + P G Y+ LSN+YA WD
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDR 543
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGY 571
VA VR M+E+G+ K+ GCSW+E+ + F V D HP + + +E + +++ G+
Sbjct: 544 VAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGF 603
Query: 572 IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKF 631
+ + LHD+ E E L +HSE++A+ YG++ P G +R+ KNLR C +CH A K
Sbjct: 604 VANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKL 663
Query: 632 ISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
ISK +G CSCG+YW
Sbjct: 664 ISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 159/327 (48%), Gaps = 43/327 (13%)
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
GI D + Y SLI ++ + +Q+HA +L +Q S I + +A +F G
Sbjct: 17 GIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSF----GD 68
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+ AR+VFD ++P + W +I G + +
Sbjct: 69 ITFARQVFD-------------------------------DLPRPQIFPWNAIIRGYSRN 97
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
+++L +++ M+ + P + + +KAC L L G+ +H+QV +LG D+ +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 329 NALITMYAKCGVVGYADMVF--LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
N LI +YAKC +G A VF L +P VSW A+++A AQ+G ++A++++ QM K D
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
+ PD + +++L+A + +K+G+ S+ G+ D L + + G+ + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASV-VKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 447 KKVTESMPFEPSAPIWESLLAGCRIHG 473
K + + M P+ +W ++++G +G
Sbjct: 277 KILFDKMK-SPNLILWNAMISGYAKNG 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ +I + + + AR + D V W+AMI GY HG EA +R M G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
++ T+ L+ A ++G+ G + + P + V I + G L Q
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV----IDLLGRAGHLDQ 477
Query: 212 AREVFDKMPVRDLVS-WNAILSGYINARRLEEAKFIFREV 250
A EV MPV+ V+ W A+LS R +E ++ +++
Sbjct: 478 AYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/575 (34%), Positives = 311/575 (54%), Gaps = 42/575 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+A Y + L+ A+++ G+ +WNA+I G+ + + D +M G+
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D +T SL+SA G+++H +++R ++
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE------------------------- 528
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
RDL + ++LS YI+ L + +F + +++L++W +I+G ++GF
Sbjct: 529 ----------RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 578
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
+ +L +F QM G++ C + AC +L SL G++ H+ ++ + +L
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MYAK G + + VF + + SWNAMI HG +AI+L+E+M + PD
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA-KKVT 450
+TFL +L+AC+H+GL+ EG Y D M + +G+ P HYA +ID+L RAG+ +A + V
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
E M E IW+SLL+ CRIH N+E+G + A +LFEL PE+ Y++LSN+YA LGKW+
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAV---HPEVHAVYKYLEQLVIEMR 567
+V +VR+ M E ++K+ GCSWIE+ V F+V + E+ +++ LE +++
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILE---MKIS 875
Query: 568 KLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHN 627
K+GY PDT V HD+ E K L HSEKLA+ YG++K G TIRV+KNLR+C DCHN
Sbjct: 876 KMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHN 935
Query: 628 AFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
A K ISK NG CSCG+YW
Sbjct: 936 AAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 42/330 (12%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
+ D+ T +I Y +R + D + WNA+IS Y R+ LY+E +TF +
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 145 MHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
M S + D +TY +I A G +H V++T + + V NAL++FY
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED----VFVGNALVSFY 232
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
G + A ++FD M PERNL++W MI
Sbjct: 233 GTHGFVTDALQLFDIM-------------------------------PERNLVSWNSMIR 261
Query: 264 GLAESGFGEESLKLFNQMKSE----GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
+++GF EES L +M E P + C + G+ +H ++L
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLY 379
D L NAL+ MY+KCG + A M+F + VSWN M+ + G +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 380 EQMLK--EDILPDRITFLTILSACSHAGLV 407
QML ED+ D +T L + C H +
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 117/233 (50%), Gaps = 9/233 (3%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
++D + ++++ Y+ +L + + L D M V+WN +I+GY+++G + A FR+
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
M GIQ+ + + A GR+ HAY L+ +++ + FI +LI Y
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE-DDAFIAC---SLIDMYA 643
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTV 260
K G + Q+ +VF+ + + SWNA++ GY +EA +F E+ + LT+
Sbjct: 644 KNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLG 703
Query: 261 MISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQI 312
+++ SG E L+ +QMKS GL+P YA I G G LD ++
Sbjct: 704 VLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/555 (35%), Positives = 307/555 (55%), Gaps = 22/555 (3%)
Query: 122 WNAMISGYV-------RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 174
WN +I V RH + +M + + D +T+ L+ + N G+
Sbjct: 27 WNIIIRAIVHNVSSPQRHS----PISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 175 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 234
+ HA +L + V +L+ Y+ CG L A+ VFD +DL +WN++++ Y
Sbjct: 83 RTHAQILLFGLDKDPF----VRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAY 138
Query: 235 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK-----SEGLEPC 289
A +++A+ +F E+PERN+++W+ +I+G G +E+L LF +M+ + P
Sbjct: 139 AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN 198
Query: 290 DYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFL 349
++ + + ACG LG+L+ G+ +H+ + + + + G ALI MYAKCG + A VF
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 350 TM-PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED-ILPDRITFLTILSACSHAGLV 407
+ D +++AMI LA +G + QL+ +M D I P+ +TF+ IL AC H GL+
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLI 318
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
EG+ YF M +G+TP HY ++DL R+G EA+ SMP EP IW SLL+
Sbjct: 319 NEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 468 GCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
G R+ G+I+ A +RL EL P G Y++LSN+YA G+W EV +R M +G+ K
Sbjct: 379 GSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKV 438
Query: 528 PGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHK 587
PGCS++E+E +VH F+V D E +Y L++++ +R+ GY+ DTK VL D+ + K
Sbjct: 439 PGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDK 498
Query: 588 EHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXX 647
E ALS HSEKLA+ + ++K G +R+ KNLR+CGDCH K ISK
Sbjct: 499 EIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNR 558
Query: 648 XXXXXNGECSCGNYW 662
+G CSC ++W
Sbjct: 559 FHHFRDGSCSCRDFW 573
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 165/343 (48%), Gaps = 53/343 (15%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 90
Q+ H ++ +G+ P V +LL+ Y C + SA+++FD++ KD P+
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGD---------LRSAQRVFDDS--GSKDLPA 130
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM----- 145
W +++ Y + + ARKL D M ++W+ +I+GYV G Y+EA D FR+M
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
+ ++ +E+T ++++SA G G+ +HAY+ + V+ + + ALI Y K
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID----IVLGTALIDMYAK 246
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
CG L +A+ VF NA+ S ++++ ++ MI L
Sbjct: 247 CGSLERAKRVF-----------NALGS-------------------KKDVKAYSAMICCL 276
Query: 266 AESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI-QLGHDS 323
A G +E +LF++M S+ + P + G + AC G ++ G+ +I + G
Sbjct: 277 AMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITP 336
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMIAA 365
S+ ++ +Y + G++ A+ +MP D + W ++++
Sbjct: 337 SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 302/561 (53%), Gaps = 6/561 (1%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG--IQMDEYTYTSLI 161
L A ++LD P A N+MI + + + E++FD +R++ S G ++ D YT L+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
A + G Q+H +R H V LI+ Y + G L +VF+ +P
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPH----VQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
D V A+++ + A+ +F +PER+ + W MISG A+ G E+L +F+ M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
+ EG++ A + AC LG+LD G+ HS + + ++ L+ +YAKCG +
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
A VF M + +W++ + LA +G G + ++L+ M ++ + P+ +TF+++L C
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGC 351
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
S G V EGQ +FDSM +G+ P +HY L+DL RAG+ +A + + MP +P A +
Sbjct: 352 SVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV 411
Query: 462 WESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRE 521
W SLL R++ N+ELG+ A++++ EL G Y++LSN+YA WD V+ VR+ M+
Sbjct: 412 WSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKS 471
Query: 522 RGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHD 581
+GV+K+PGCS +E+ VH F V D HP+ + + + +R GY DT V+ D
Sbjct: 472 KGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFD 531
Query: 582 MESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXX 641
++ E KE AL HSEK A+ +GI+ L IR+ KNLR+CGDCH ISK
Sbjct: 532 IDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREII 591
Query: 642 XXXXXXXXXXXNGECSCGNYW 662
+G CSC +W
Sbjct: 592 VRDRNRFHHFKDGHCSCNGFW 612
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 53/366 (14%)
Query: 4 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY--ICCAS 61
+ PD ++ + ++ A + + E Q +H ++ G P V L+S Y + C
Sbjct: 102 NDLKPDNYTVNFLVQACTGLRMRETGLQ-VHGMTIRRGFDNDPHVQTGLISLYAELGC-- 158
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 121
+ S K+F+ P D T M+ R D+ ARKL +GM +A
Sbjct: 159 ---------LDSCHKVFNSIPCP--DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIA 207
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
WNAMISGY + G EA + F M G++++ S++SA G + GR H+Y+
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
R ++ + + L+ Y KCG + +A EVF W
Sbjct: 268 RNKIK----ITVRLATTLVDLYAKCGDMEKAMEVF----------WG------------- 300
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
+ E+N+ TW+ ++GLA +GFGE+ L+LF+ MK +G+ P + ++ C
Sbjct: 301 --------MEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCS 352
Query: 302 VLGSLDNGQQ-IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS-W 359
V+G +D GQ+ S + G + L L+ +YA+ G + A + MP + W
Sbjct: 353 VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVW 412
Query: 360 NAMIAA 365
++++ A
Sbjct: 413 SSLLHA 418
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 343/647 (53%), Gaps = 57/647 (8%)
Query: 32 QLHCDVVKWGVMCVPSVLNTLLSCYIC--CASSTLVESPVLMASARKLFDEAPLSQKDEP 89
Q+H +K G M +TL + I CA+S L + A K+F++ P Q++
Sbjct: 41 QIHAVFIKSGQM-----RDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMP--QRNCF 91
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 149
SW T+I G+ +D+ + IA+ YE D F
Sbjct: 92 SWNTIIRGFSESDEDKAL----------IAITL-----------FYEMMSDEF------- 123
Query: 150 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
++ + +T+ S++ A TG G+Q+H L+ E F++S L+ Y CG +
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDE-FVMS---NLVRMYVMCGFM 179
Query: 210 VQAREVFDKMPV------------RD--LVSWNAILSGYINARRLEEAKFIFREVPERNL 255
AR +F K + RD +V WN ++ GY+ + A+ +F ++ +R++
Sbjct: 180 KDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV 239
Query: 256 LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
++W MISG + +GF ++++++F +MK + P + A LGSL+ G+ +H
Sbjct: 240 VSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLY 299
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
G G+ALI MY+KCG++ A VF +P + ++W+AMI A HG+ A
Sbjct: 300 AEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDA 359
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
I + +M + + P + ++ +L+ACSH GLV+EG+ YF M + G+ P +HY ++D
Sbjct: 360 IDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVD 419
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGT 495
LL R+G EA++ +MP +P IW++LL CR+ GN+E+G + A L ++ P G
Sbjct: 420 LLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGA 479
Query: 496 YIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAV 555
Y+ LSNMYA G W EV+ +R M+E+ ++K+PGCS I+I+ ++H F+V+D HP+ +
Sbjct: 480 YVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEI 539
Query: 556 YKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRV 615
L ++ ++R GY P T VL ++E E KE+ L HSEK+A +G++ G IR+
Sbjct: 540 NSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRI 599
Query: 616 FKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KNLR+C DCH++ K ISK +G CSC +YW
Sbjct: 600 VKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 174/383 (45%), Gaps = 56/383 (14%)
Query: 1 MKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M D F P+ F+F +VL A + + + +Q+H +K+G V++ L+ Y+ C
Sbjct: 118 MMSDEFVEPNRFTFPSVLKACAKTGKIQ-EGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
Query: 60 A----------SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 109
+ + + V+M RK E L W MI GY+R D +AR
Sbjct: 177 GFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVL-------WNVMIDGYMRLGDCKAARM 229
Query: 110 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 169
L D M V+WN MISGY +G +++A + FR+M I+ + T S++ A G
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS 289
Query: 170 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 229
G LH Y + ++ + + +ALI Y+KCG + +A VF+++P ++++W+A
Sbjct: 290 LELGEWLHLYAEDSGIRIDD----VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA 345
Query: 230 ILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPC 289
MI+G A G +++ F +M+ G+ P
Sbjct: 346 -------------------------------MINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 290 DYAYAGAIKACGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVF 348
D AY + AC G ++ G++ SQ++ + G + + ++ + + G++ A+
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 349 LTMPYV-DSVSWNAMIAALAQHG 370
L MP D V W A++ A G
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQG 457
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 55/318 (17%)
Query: 209 LVQAREVFDKM-PVRDLVSWNAIL----SGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
L Q VF K +RD ++ IL + ++ R L+ A IF ++P+RN +W +I
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 264 GLAESGFGEE--SLKLFNQMKS-EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
G +ES + ++ LF +M S E +EP + + +KAC G + G+QIH ++ G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 321 HDSSLSAGNALITMYAKCG-------------------------------------VVGY 343
+ L+ MY CG + GY
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 344 --------ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFL 395
A M+F M VSWN MI+ + +G A++++ +M K DI P+ +T +
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF 455
++L A S G ++ G+ + G+ + + LID+ + G +A V E +P
Sbjct: 279 SVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 456 EPSAPIWESLLAGCRIHG 473
E + W +++ G IHG
Sbjct: 338 E-NVITWSAMINGFAIHG 354
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 339/669 (50%), Gaps = 84/669 (12%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M R G P+ F+FST L A L+ E Q+H +K G + V N+L+ Y C
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALE-KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 156
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ A K+F R+++D +
Sbjct: 157 R---------INEAEKVF-----------------------------RRIVD----RSLI 174
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM--DEYTYTSLISASFNTGLFNCGRQLHA 178
+WNAMI+G+V G +A DTF M I+ DE+T TSL+ A +TG+ G+Q+H
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 179 YVLRTVVQ-PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
+++R+ PS ++ +L+ Y KCG L AR+ FD
Sbjct: 235 FLVRSGFHCPSS---ATITGSLVDLYVKCGYLFSARKAFD-------------------- 271
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
++ E+ +++W+ +I G A+ G E++ LF +++ + +A + I
Sbjct: 272 -----------QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
L G+Q+ + ++L S N+++ MY KCG+V A+ F M D +
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVI 380
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
SW +I +HG G ++++++ +ML+ +I PD + +L +LSACSH+G++KEG+ F +
Sbjct: 381 SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 440
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIEL 477
+G+ P +HYA ++DLL RAG+ EAK + ++MP +P+ IW++LL+ CR+HG+IEL
Sbjct: 441 LETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIEL 500
Query: 478 GIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIEN 537
G + + L + + Y+++SN+Y G W+E R+L +G+KKE G SW+EIE
Sbjct: 501 GKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIER 560
Query: 538 MVHVFLVDDAVHPEVHAVYKYLEQLVIEMR-KLGYIPDTKFVLHDMESEHKEHALSTHSE 596
VH F + HP + + L++ +R +LGY+ K LHD++ E KE L HSE
Sbjct: 561 EVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSE 620
Query: 597 KLAVVYGILKLPL---GATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXN 653
KLA+ + L G TIRVFKNLR+C DCH K +SK +
Sbjct: 621 KLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFED 680
Query: 654 GECSCGNYW 662
G CSCG+YW
Sbjct: 681 GCCSCGDYW 689
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 188/399 (47%), Gaps = 50/399 (12%)
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
S++ GL + G Q+H Y+L++ L +N LI Y KC + + A +VFD
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKS----GSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
M PERN+++W+ ++SG +G + SL L
Sbjct: 66 SM-------------------------------PERNVVSWSALMSGHVLNGDLKGSLSL 94
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F++M +G+ P ++ ++ +KACG+L +L+ G QIH +++G + + GN+L+ MY+K
Sbjct: 95 FSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 154
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI--LPDRITFL 395
CG + A+ VF + +SWNAMIA G G +A+ + M + +I PD T
Sbjct: 155 CGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY-ARLIDLLCRAGKFSEAKKVTESMP 454
++L ACS G++ G+ + P L+DL + G A+K + +
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 455 FEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVAR 514
E + W SL+ G G + +RL EL + D LS++ +G + + A
Sbjct: 275 -EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDS--FALSSI---IGVFADFAL 328
Query: 515 VR--KLMRERGVKKEPGCSWIEIENMVHVF----LVDDA 547
+R K M+ VK G + ++V ++ LVD+A
Sbjct: 329 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/570 (35%), Positives = 300/570 (52%), Gaps = 36/570 (6%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y + D+ +AR + + M V+WN++ISGY++ G EA F+ M M Q D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
TY LIS S G+ LH+ +++ + LSV+NALI Y KCG++ +
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICID----LSVSNALIDMYAKCGEVGDSL 463
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
++F M D V+WN +IS G
Sbjct: 464 KIFSSMGTGDTVTWNT-------------------------------VISACVRFGDFAT 492
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
L++ QM+ + P + + C L + G++IH +++ G++S L GNALI
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
MY+KCG + + VF M D V+W MI A +G G +A++ + M K I+PD +
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
F+ I+ ACSH+GLV EG F+ M THY + P +HYA ++DLL R+ K S+A++ ++M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 454 PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVA 513
P +P A IW S+L CR G++E + + R+ EL P+ G I+ SN YA L KWD+V+
Sbjct: 673 PIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVS 732
Query: 514 RVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIP 573
+RK ++++ + K PG SWIE+ VHVF D P+ A+YK LE L M K GYIP
Sbjct: 733 LIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIP 792
Query: 574 DTKFVLHDM-ESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFI 632
D + V ++ E E K + HSE+LA+ +G+L G ++V KNLR+CGDCH K I
Sbjct: 793 DPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLI 852
Query: 633 SKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
SK +G CSC + W
Sbjct: 853 SKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 196/418 (46%), Gaps = 41/418 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++ Y R L AR++ D M V+WN++ISGY HG YEEA + + ++ + I
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D +T +S++ A N + G+ LH + L++ V
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV---------------------- 242
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
V N +++ Y+ RR +A+ +F E+ R+ +++ MI G +
Sbjct: 243 -------------VVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EES+++F + + +P + ++ACG L L + I++ +++ G + N L
Sbjct: 290 EESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I +YAKCG + A VF +M D+VSWN++I+ Q G ++A++L++ M+ + D
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
IT+L ++S + +K G+ S G+ LID+ + G+ ++ K+
Sbjct: 409 ITYLMLISVSTRLADLKFGKG-LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAE--RLFELTPEQDGTYIILSNMYAHLG 507
SM + W ++++ C G+ G+Q R E+ P+ T+++ M A L
Sbjct: 468 SMGTGDTVT-WNTVISACVRFGDFATGLQVTTQMRKSEVVPDM-ATFLVTLPMCASLA 523
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 182/387 (47%), Gaps = 39/387 (10%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
WN++I + ++GL+ EA + + K+ + D+YT+ S+I A GLF+ ++ V
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA--EMGDLVY 129
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
++ L V NAL+ Y++ G L +AR+V
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQV-------------------------- 163
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
F E+P R+L++W +ISG + G+ EE+L++++++K+ + P + + + A G
Sbjct: 164 -----FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
L + GQ +H ++ G +S + N L+ MY K A VF M DSVS+N
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHY 421
MI + ++++++ + L + PD +T ++L AC H + ++ ++ M
Sbjct: 279 MICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA- 336
Query: 422 GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
G LID+ + G A+ V SM + + W S+++G G++ ++
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKL 395
Query: 482 AERLFELTPEQDG-TYIILSNMYAHLG 507
+ + + + D TY++L ++ L
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLA 422
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 103/183 (56%), Gaps = 1/183 (0%)
Query: 230 ILSGYINARRLEEAKFIFREV-PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
++ Y + R + +FR V P +N+ W +I +++G E+L+ + +++ + P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
Y + IKAC L + G ++ Q++ +G +S L GNAL+ MY++ G++ A VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
MP D VSWN++I+ + HG +A+++Y ++ I+PD T ++L A + +VK
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 409 EGQ 411
+GQ
Sbjct: 225 QGQ 227
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM-PYVDS 356
+A +L+ ++IH+ VI LG DSS LI Y+ + VF + P +
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
WN++I A +++G +A++ Y ++ + + PD+ TF +++ AC+ + G ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 417 MCTHYGMTPGEDHYA--RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+ M D + L+D+ R G + A++V + MP W SL++G HG
Sbjct: 132 ILD---MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHGY 187
Query: 475 IELGIQ 480
E ++
Sbjct: 188 YEEALE 193
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/507 (38%), Positives = 298/507 (58%), Gaps = 18/507 (3%)
Query: 46 PSVL--NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 103
P+ L N L+ Y+ C P+ A K+FD+ L ++ SW M++GYV++
Sbjct: 80 PNTLLSNHLIGMYMKCGK------PI---DACKVFDQMHL--RNLYSWNNMVSGYVKSGM 128
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
L AR + D M V+WN M+ GY + G EA +++ GI+ +E+++ L++A
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
+ RQ H VL V + +LS ++I Y KCG++ A+ FD+M V+D
Sbjct: 189 CVKSRQLQLNRQAHGQVL--VAGFLSNVVLSC--SIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+ W ++SGY +E A+ +F E+PE+N ++WT +I+G G G +L LF +M +
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
G++P + ++ + A + SL +G++IH +I+ + ++LI MY+K G +
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 344 ADMVF-LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
++ VF + D V WN MI+ALAQHG G +A+++ + M+K + P+R T + IL+ACS
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
H+GLV+EG +F+SM +G+ P ++HYA LIDLL RAG F E + E MPFEP IW
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIW 484
Query: 463 ESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRER 522
++L CRIHGN ELG +AA+ L +L PE YI+LS++YA GKW+ V ++R +M++R
Sbjct: 485 NAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKR 544
Query: 523 GVKKEPGCSWIEIENMVHVFLVDDAVH 549
V KE SWIEIE V F V D H
Sbjct: 545 RVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 202/434 (46%), Gaps = 45/434 (10%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
PI VA + +S + +A + GI++ SL+ +T G+ +
Sbjct: 10 PICVA-QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H ++ T + + +N LI Y KCGK + A +VFD+M +R+L SWN ++SGY+
Sbjct: 69 HRHLKITGFKRPNTLL---SNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
+ L A+ +F +PER++++W M+ G A+ G E+L + + + G++ ++++AG
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG----------------- 339
+ AC L +Q H QV+ G S++ ++I YAKCG
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 340 ------VVGYADM--------VFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
+ GYA + +F MP + VSW A+IA + G G +A+ L+ +M+
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
+ P++ TF + L A + ++ G+ M + P + LID+ ++G
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL-----FELTPEQDGTYIILS 500
+++V + W ++++ HG LG +A L F + P + T +++
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRT-TLVVIL 420
Query: 501 NMYAHLGKWDEVAR 514
N +H G +E R
Sbjct: 421 NACSHSGLVEEGLR 434
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 222/670 (33%), Positives = 343/670 (51%), Gaps = 88/670 (13%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWH--CQQLHCDVVKWGVMCVPSVLNTLLSCYIC 58
M+R P F T++ ++S A +W QQ+H + +K G+ SV N L++ Y
Sbjct: 406 MRRHDILPGSF---TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY-- 460
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
GY L RK+ M
Sbjct: 461 -----------------------------------AETGY-----LNECRKIFSSMPEHD 480
Query: 119 AVAWNAMISGYVR-HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 177
V+WN++I R EA F G +++ T++S++SA + G+Q+H
Sbjct: 481 QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 178 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
L+ + + NALI Y KCG++ ++F +M R
Sbjct: 541 GLALKNNIADEA----TTENALIACYGKCGEMDGCEKIFSRMAER--------------- 581
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
R+ +TW MISG + ++L L M G + YA +
Sbjct: 582 ---------------RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 626
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
A + +L+ G ++H+ ++ +S + G+AL+ MY+KCG + YA F TMP +S
Sbjct: 627 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
SWN+MI+ A+HG+G +A++L+E M L PD +TF+ +LSACSHAGL++EG +F+S
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL-AGCRIHG-N 474
M YG+ P +H++ + D+L RAG+ + + E MP +P+ IW ++L A CR +G
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 806
Query: 475 IELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
ELG +AAE LF+L PE Y++L NMYA G+W+++ + RK M++ VKKE G SW+
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 866
Query: 535 IENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTH 594
+++ VH+F+ D HP+ +YK L++L +MR GY+P T F L+D+E E+KE LS H
Sbjct: 867 MKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYH 926
Query: 595 SEKLAVVYGILKLPLGAT--IRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXX 652
SEKLAV + +L +T IR+ KNLR+CGDCH+AFK+ISK
Sbjct: 927 SEKLAVAF-VLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQ 985
Query: 653 NGECSCGNYW 662
+G CSC ++W
Sbjct: 986 DGACSCSDFW 995
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 205/495 (41%), Gaps = 95/495 (19%)
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQ---KDEPSWTTMIAGYVRNDDLASARKLLDGMT 115
C + V+S V A + F KD +I Y+ D SARK+ D M
Sbjct: 4 CVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 116 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG----LFN 171
V+W ++SGY R+G ++EA R M GI ++Y + S++ A G LF
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF- 122
Query: 172 CGRQLH------AYVLRTVVQP-----------SEHFIL----------SVN-NALITFY 203
GRQ+H +Y + VV S + L SV+ N++I+ Y
Sbjct: 123 -GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVY 181
Query: 204 TKCGKLVQAREVFDKMP-----------------------------------------VR 222
++ G A +F M +
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
DL + ++S + + L A+ +F ++ RN +T ++ GL +GEE+ KLF M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 283 SE-GLEPCDYA--------YAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALI 332
S + P Y Y+ A + L G+++H VI G D + GN L+
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEV-----GLKKGREVHGHVITTGLVDFMVGIGNGLV 356
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
MYAKCG + A VF M DSVSWN+MI L Q+G ++A++ Y+ M + DILP
Sbjct: 357 NMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
T ++ LS+C+ K GQ G+ L+ L G +E +K+ S
Sbjct: 417 TLISSLSSCASLKWAKLGQQ-IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 453 MPFEPSAPIWESLLA 467
MP E W S++
Sbjct: 476 MP-EHDQVSWNSIIG 489
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 41/309 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ +++ + ++ L+ ARK+ + M AV N ++ G VR EEA F M+SM I
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-ID 305
Query: 152 MDEYTYTSLISASFNTGL-----FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
+ +Y L+S+ L GR++H +V+ T + F++ + N L+ Y KC
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD---FMVGIGNGLVNMYAKC 362
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G + AR VF M +D V +W MI+GL
Sbjct: 363 GSIADARRVFYFMTDKDSV-------------------------------SWNSMITGLD 391
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
++G E+++ + M+ + P + ++ +C L GQQIH + ++LG D ++S
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV-QAIQLYEQMLKE 385
NAL+T+YA+ G + +F +MP D VSWN++I ALA+ R + +A+ + +
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 386 DILPDRITF 394
+RITF
Sbjct: 512 GQKLNRITF 520
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 191/429 (44%), Gaps = 55/429 (12%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
++ Y + +A AR++ MT +V+WN+MI+G ++G + EA + ++ M I
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
+T S +S+ + G+Q+H L+ + + +SV+NAL+T Y + G L + R
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN----VSVSNALMTLYAETGYLNECR 470
Query: 214 EVFDKMPVRDLVSWNAILSGYINARR-LEEAKFIF----REVPERNLLTWTVMISGLAES 268
++F MP D VSWN+I+ + R L EA F R + N +T++ ++S ++
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
FGE G+QIH ++ +
Sbjct: 531 SFGEL-----------------------------------GKQIHGLALKNNIADEATTE 555
Query: 329 NALITMYAKCGVVGYADMVFLTMP-YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
NALI Y KCG + + +F M D+V+WN+MI+ + +A+ L ML+
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFD---SMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
D + T+LSA + ++ G C + G + L+D+ + G+
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG----SALVDMYSKCGRLD 671
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAE--RLFELTPEQDGTYIILSNM 502
A + +MP S W S+++G HG E ++ E +L TP T++ + +
Sbjct: 672 YALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSA 730
Query: 503 YAHLGKWDE 511
+H G +E
Sbjct: 731 CSHAGLLEE 739
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/631 (33%), Positives = 334/631 (52%), Gaps = 78/631 (12%)
Query: 32 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 91
QLH VVK G+ +P V N L++ Y L +R+ F+++P QK +W
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFY---------SKSQLPFDSRRAFEDSP--QKSSTTW 84
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++I+ + +N+ + W ++ + +KM + ++
Sbjct: 85 SSIISCFAQNE-----------------LPWMSL--------------EFLKKMMAGNLR 113
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D++ S + + GR +H ++T + V ++L+ Y KCG++V
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD----VFVGSSLVDMYAKCGEIVY 169
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
AR++FD+M P+RN++TW+ M+ G A+ G
Sbjct: 170 ARKMFDEM-------------------------------PQRNVVTWSGMMYGYAQMGEN 198
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EE+L LF + E L DY+++ I C L+ G+QIH I+ DSS G++L
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+++Y+KCGV A VF +P + WNAM+ A AQH + I+L+++M + P+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
ITFL +L+ACSHAGLV EG++YFD M + P + HYA L+D+L RAG+ EA +V
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
+MP +P+ +W +LL C +H N EL AA+++FEL P G +I LSN YA G++++
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGY 571
A+ RKL+R+RG KKE G SW+E N VH F + H + +Y+ L +L EM K GY
Sbjct: 438 AAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGY 497
Query: 572 IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKF 631
I DT +VL +++ + K + HSE+LA+ +G++ P IRV KNLR+CGDCHNA KF
Sbjct: 498 IADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKF 557
Query: 632 ISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
+S +G+CSC +YW
Sbjct: 558 MSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 161/341 (47%), Gaps = 40/341 (11%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G QLH YV+++ + I V N LI FY+K +R F+ P + +W++I+S
Sbjct: 34 GLQLHGYVVKSGLS----LIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIIS 89
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
+ +N L W SL+ +M + L P D+
Sbjct: 90 CFA-----------------QNELPWM--------------SLEFLKKMMAGNLRPDDHV 118
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
A K+C +L D G+ +H ++ G+D+ + G++L+ MYAKCG + YA +F MP
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
+ V+W+ M+ AQ G +A+ L+++ L E++ + +F +++S C+++ L++ G+
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ 238
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
+ + L+ L + G A +V +P + + IW ++L H
Sbjct: 239 -IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQH 296
Query: 473 GNIELGIQAAERLFELTPEQDG--TYIILSNMYAHLGKWDE 511
+ + I+ +R+ +L+ + T++ + N +H G DE
Sbjct: 297 SHTQKVIELFKRM-KLSGMKPNFITFLNVLNACSHAGLVDE 336
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/573 (34%), Positives = 304/573 (53%), Gaps = 37/573 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ V D+ AR++ D M P WN + GYVR+ L E+ ++KM +G++
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
DE+TY ++ A G F+CG LHA+V V+ + V L+ Y K G+L
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHV----VKYGFGCLGIVATELVMMYMKFGELSS 162
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +F+ M V ++L+ W ++ ++G
Sbjct: 163 AEFLFESMQV-------------------------------KDLVAWNAFLAVCVQTGNS 191
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
+L+ FN+M ++ ++ + + ACG LGSL+ G++I+ + + D ++ NA
Sbjct: 192 AIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENAR 251
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ M+ KCG A ++F M + VSW+ MI A +G +A+ L+ M E + P+
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNY 311
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMC--THYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
+TFL +LSACSHAGLV EG+ YF M + P ++HYA ++DLL R+G EA +
Sbjct: 312 VTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEF 371
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
+ MP EP IW +LL C +H ++ LG + A+ L E P+ +++LSN+YA GKW
Sbjct: 372 IKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKW 431
Query: 510 DEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
D V +VR MR+ G KK S +E E +H F D HP+ A+Y+ L++++ ++RK+
Sbjct: 432 DCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKM 491
Query: 570 GYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAF 629
GY+PDT V HD+E E KE +LS HSEKLA+ +G++K G IRV KNLR C DCH
Sbjct: 492 GYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFS 551
Query: 630 KFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KF+S NG CSC +W
Sbjct: 552 KFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 155/375 (41%), Gaps = 86/375 (22%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ-QLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M+ G PD F++ V+ A+S + + + C LH VVK+G C+ V
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGD--FSCGFALHAHVVKYGFGCLGIVA---------- 147
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
T ++ Y++ +L+SA L + M
Sbjct: 148 --------------------------------TELVMMYMKFGELSSAEFLFESMQVKDL 175
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
VAWNA ++ V+ G A + F KM + +Q D +T S++SA G G +++
Sbjct: 176 VAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR 235
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+ + + + V NA + + KCG AR +F++M R++VSW+ ++ GY
Sbjct: 236 ARKEEIDCN----IIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGY----- 286
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
A +G E+L LF M++EGL P + G + A
Sbjct: 287 --------------------------AMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGN----ALITMYAKCGVVGYADMVFLTMPY-V 354
C G ++ G++ S ++Q +D +L ++ + + G++ A MP
Sbjct: 321 CSHAGLVNEGKRYFSLMVQ-SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEP 379
Query: 355 DSVSWNAMIAALAQH 369
D+ W A++ A A H
Sbjct: 380 DTGIWGALLGACAVH 394
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 310/590 (52%), Gaps = 40/590 (6%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
A +LF + P+ KD +W +M+ GY++ + A KL M ++W MI G ++
Sbjct: 147 AERLFYQMPV--KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNE 204
Query: 134 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 193
EA D F+ M I+ +T +I+A N F+ G Q+H +++ E+
Sbjct: 205 RSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY--- 261
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
V+ +LITFY C ++ +R+VFD+ + W A+LSGY ++ E+A
Sbjct: 262 -VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA---------- 310
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
L +F+ M + P +A + +C LG+LD G+++H
Sbjct: 311 ---------------------LSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 314 SQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV 373
++LG ++ GN+L+ MY+ G V A VF+ + VSWN++I AQHGRG
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 374 QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE-DHYAR 432
A ++ QM++ + PD ITF +LSACSH G +++G+ F M + + HY
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQ 492
++D+L R GK EA+++ E M +P+ +W +LL+ CR+H +++ G +AA +F L +
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 493 DGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEV 552
Y++LSN+YA G+W V+++R M++ G+ K+PG SW+ I H F D P
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHC 587
Query: 553 HAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGAT 612
+Y+ LE L ++++LGY PD + LHD+E E KE L HSE+LA+ +G++ G+
Sbjct: 588 SRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 613 IRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
+ V KNLR+C DCH K IS NG CSCG+YW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 197/435 (45%), Gaps = 48/435 (11%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
AR++F++ P +T MI GY R++ L A L D M V+WN+MISG V G
Sbjct: 54 AREVFNQVP--SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 134 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 193
A F +M + ++T++++ F +G
Sbjct: 112 DMNTAVKLFDEMPERSV----VSWTAMVNGCFRSG------------------------- 142
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
K+ QA +F +MPV+D +WN+++ GY+ ++++A +F+++P +
Sbjct: 143 --------------KVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
N+++WT MI GL ++ E+L LF M ++ + I AC + G Q+H
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248
Query: 314 SQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV 373
+I+LG +LIT YA C +G + VF + W A+++ + + +
Sbjct: 249 GLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHE 308
Query: 374 QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARL 433
A+ ++ ML+ ILP++ TF + L++CS G + G+ + G+ L
Sbjct: 309 DALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-MHGVAVKLGLETDAFVGNSL 367
Query: 434 IDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD 493
+ + +G ++A V + F+ S W S++ GC HG + ++ L E D
Sbjct: 368 VVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Query: 494 G-TYIILSNMYAHLG 507
T+ L + +H G
Sbjct: 427 EITFTGLLSACSHCG 441
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 296/542 (54%), Gaps = 71/542 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ +I Y + ++ SAR LL+GM V+WN+MI G VR GL EA F +MH ++
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 152 MDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+D++T S+++ + + H +++T + VNNAL+ Y K G +
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL----VNNALVDMYAKRGIMD 381
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A +VF+ M E+++++WT +++G +G
Sbjct: 382 SALKVFEGMI-------------------------------EKDVISWTALVTGNTHNGS 410
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+E+LKLF M+ G+ P A + A L L+ GQQ+H I+ G SSLS N+
Sbjct: 411 YDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNS 470
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+TMY KCG + A+++F +M D ++W +I A++G
Sbjct: 471 LVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG-------------------- 510
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
L+++ Q YFDSM T YG+TPG +HYA +IDL R+G F + +++
Sbjct: 511 ---------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLL 555
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
M EP A +W+++LA R HGNIE G +AA+ L EL P Y+ LSNMY+ G+ D
Sbjct: 556 HQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQD 615
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
E A VR+LM+ R + KEPGCSW+E + VH F+ +D HP + +Y ++++++ +++ G
Sbjct: 616 EAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAG 675
Query: 571 YIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFK 630
Y D F LHD++ E KE L+ HSEKLAV +G+L +P GA IR+ KNLR+CGDCH+A K
Sbjct: 676 YFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMK 735
Query: 631 FI 632
+
Sbjct: 736 LL 737
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 164/316 (51%), Gaps = 12/316 (3%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G +H+Y RT + +N L+ +K G++ +AR++FDKMP RD +WN ++
Sbjct: 17 GSCIHSYADRTKLH---------SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIV 67
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
Y N+RRL +A+ +FR P +N ++W +ISG +SG E+ LF +M+S+G++P +Y
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
++ C L L G+QIH I+ G D ++ N L+ MYA+C + A+ +F TM
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 353 -YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
++V+W +M+ +Q+G +AI+ + + +E ++ TF ++L+AC+ + G
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
G + LID+ + + A+ + E M + W S++ GC
Sbjct: 248 Q-VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVR 305
Query: 472 HGNIELGIQAAERLFE 487
G I + R+ E
Sbjct: 306 QGLIGEALSMFGRMHE 321
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 69/444 (15%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
AR++FD+ P ++DE +W TMI Y + L+ A KL ++WNA+ISGY + G
Sbjct: 47 ARQMFDKMP--ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSG 104
Query: 134 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 193
EAF+ F +M S GI+ +EYT S++ + L G Q+H + ++T F L
Sbjct: 105 SKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT------GFDL 158
Query: 194 SVN--NALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREV 250
VN N L+ Y +C ++ +A +F+ M ++ V+W ++L+GY
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGY---------------- 202
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
+++GF ++++ F ++ EG + Y + + AC + + G
Sbjct: 203 ---------------SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
Q+H +++ G +++ +ALI MYAKC + A + M D VSWN+MI + G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTIL------------SACSHAGLVKEGQHYFDSMC 418
+A+ ++ +M + D+ D T +IL ++ +H +VK G + +
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN 367
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE-- 476
L+D+ + G A KV E M E W +L+ G +G+ +
Sbjct: 368 NA------------LVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEA 414
Query: 477 LGIQAAERLFELTPEQDGTYIILS 500
L + R+ +TP++ T +LS
Sbjct: 415 LKLFCNMRVGGITPDKIVTASVLS 438
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 168/418 (40%), Gaps = 102/418 (24%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ---QLHCDVVKWGVMCVPSVLNTLLSCYI 57
++R+G + ++F +VL A + ++ C+ Q+HC +VK G V + L+ Y
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSA----CRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 58 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKL------- 110
C M SAR L + + D SW +MI G VR + A +
Sbjct: 274 KCRE---------MESARALLE--GMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 111 ---LDGMTHP------------------------------IAVAWNAMISGYVRHGLYE- 136
+D T P + NA++ Y + G+ +
Sbjct: 323 DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDS 382
Query: 137 ------------------------------EAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
EA F M GI D+ S++SAS
Sbjct: 383 ALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAE 442
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
L G+Q+H +++ S LSVNN+L+T YTKCG L A +F+ M +RDL++
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSS----LSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLT-----WTVMISGLAESGFGEESLKLFNQM 281
W ++ GY LE+A+ F + +T + MI SG + +L +QM
Sbjct: 499 WTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG 339
+ +EP + + A G+++NG++ +++L ++++ L MY+ G
Sbjct: 559 E---VEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQ-LSNMYSAAG 612
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 35/234 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ G PD ++VL A + + E+ QQ+H + +K G SV N+L++ Y C
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFG-QQVHGNYIKSGFPSSLSVNNSLVTMYTKCG 479
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S + A +F+ + +D +WT +I GY +N L A++ D M +
Sbjct: 480 S---------LEDANVIFNSMEI--RDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGI 528
Query: 121 A-----WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
+ MI + R G + + +H M ++ D + ++++AS G G +
Sbjct: 529 TPGPEHYACMIDLFGRSGDF---VKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGER 585
Query: 176 LHAYVLRTVVQPSEHFILSVNNA-----LITFYTKCGKLVQAREVFDKMPVRDL 224
+T+++ L NNA L Y+ G+ +A V M R++
Sbjct: 586 ----AAKTLME------LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 309/596 (51%), Gaps = 38/596 (6%)
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTS 159
+D L AR+LL P A +N ++ GY + F +M G D +++
Sbjct: 52 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAF 111
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG------------ 207
+I A N G Q+H L+ ++ L V LI Y CG
Sbjct: 112 VIKAVENFRSLRTGFQMHCQALKHGLESH----LFVGTTLIGMYGGCGCVEFARKVFDEM 167
Query: 208 -------------------KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 248
+ ARE+FDKM VR+ SWN +L+GYI A LE AK IF
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 249 EVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDN 308
E+P R+ ++W+ MI G+A +G ES F +++ G+ P + + G + AC GS +
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEF 287
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS-VSWNAMIAALA 367
G+ +H V + G+ +S NALI MY++CG V A +VF M VSW +MIA LA
Sbjct: 288 GKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLA 347
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
HG+G +A++L+ +M + PD I+F+++L ACSHAGL++EG+ YF M Y + P
Sbjct: 348 MHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEI 407
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+HY ++DL R+GK +A MP P+A +W +LL C HGNIEL Q +RL E
Sbjct: 408 EHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Query: 488 LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDA 547
L P G ++LSN YA GKW +VA +RK M + +KK S +E+ ++ F +
Sbjct: 468 LDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Query: 548 VHPEVHAVYKYLEQLVIEMR-KLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILK 606
++ L+++++ ++ + GY P+ L+D+E E KE +S HSEKLA+ + + +
Sbjct: 528 KKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALAR 587
Query: 607 LPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
L GA IR+ KNLR+C DCH K SK +G CSC +YW
Sbjct: 588 LSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 195/436 (44%), Gaps = 88/436 (20%)
Query: 1 MKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M R GF PD FSF+ V+ A+ Q +HC +K G+ V TL+ Y C
Sbjct: 96 MMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ-MHCQALKHGLESHLFVGTTLIGMYGGC 154
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
ARK+FDE + Q + +W +I R +D+A AR++ D M
Sbjct: 155 GCVEF---------ARKVFDE--MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNH 203
Query: 120 VAWNAMISGYVR-------------------------------HGLYEEAFDTFRKMHSM 148
+WN M++GY++ +G + E+F FR++
Sbjct: 204 TSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA 263
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
G+ +E + T ++SA +G F G+ LH +V + +I+SVNNALI Y++CG
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA----GYSWIVSVNNALIDMYSRCGN 319
Query: 209 LVQAREVFDKM-PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
+ AR VF+ M R +VSW T MI+GLA
Sbjct: 320 VPMARLVFEGMQEKRCIVSW-------------------------------TSMIAGLAM 348
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLS 326
G GEE+++LFN+M + G+ P ++ + AC G ++ G+ S++ ++ H + +
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 408
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
++ +Y + G + A MP ++ W ++ A + HG I+L EQ+ +
Sbjct: 409 HYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN----IELAEQVKQR 464
Query: 386 --DILPDRITFLTILS 399
++ P+ L +LS
Sbjct: 465 LNELDPNNSGDLVLLS 480
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 309/572 (54%), Gaps = 38/572 (6%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQ 151
++ Y+R A KL D M V+WN++ISGY G + F+ +M +G +
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+E T+ S+ISA G GR +H V++ V + V NA I +Y K G L
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE----VKVVNAFINWYGKTGDLTS 187
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+ ++F+ + ++ NL++W MI ++G
Sbjct: 188 SCKLFEDLSIK-------------------------------NLVSWNTMIVIHLQNGLA 216
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E+ L FN + G EP + +++C +G + Q IH ++ G + AL
Sbjct: 217 EKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL 276
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ +Y+K G + + VF + DS++W AM+AA A HG G AI+ +E M+ I PD
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+TF +L+ACSH+GLV+EG+HYF++M Y + P DHY+ ++DLL R+G +A + +
Sbjct: 337 VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
MP EPS+ +W +LL CR++ + +LG +AAERLFEL P Y++LSN+Y+ G W +
Sbjct: 397 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR-KLG 570
+R+R LM+++G+ + GCS+IE N +H F+V D HPE + K L+++ +M+ ++G
Sbjct: 457 ASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMG 516
Query: 571 YIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFK 630
Y T+FVLHD+ + KE ++ HSEK+A+ +G+L + I + KNLR+CGDCH K
Sbjct: 517 YKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAK 576
Query: 631 FISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
IS +G CSC +YW
Sbjct: 577 AISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 160/367 (43%), Gaps = 38/367 (10%)
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+SLI+A + R LH V+++V H + + L+ Y + G V A ++FD
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSV--SYRHGF--IGDQLVGCYLRLGHDVCAEKLFD 90
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+MP RDLVSWN+++SGY L + EV R +MIS +
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKC----FEVLSR------MMISEV------------ 128
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
G P + + I AC GS + G+ IH V++ G + NA I Y K
Sbjct: 129 -------GFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK 181
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
G + + +F + + VSWN MI Q+G + + + + PD+ TFL +
Sbjct: 182 TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAV 241
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
L +C G+V+ Q + G + + L+DL + G+ ++ V + P
Sbjct: 242 LRSCEDMGVVRLAQG-IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SP 299
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERL--FELTPEQDGTYIILSNMYAHLGKWDEVARV 515
+ W ++LA HG I+ E + + ++P+ T+ L N +H G +E
Sbjct: 300 DSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV-TFTHLLNACSHSGLVEEGKHY 358
Query: 516 RKLMRER 522
+ M +R
Sbjct: 359 FETMSKR 365
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 22/232 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + L + + +T P ++AW AM++ Y HG +A F M GI
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGIS 333
Query: 152 MDEYTYTSLISASFNTGLFNCGRQ-LHAYVLRTVVQPS-EHFILSVNNALITFYTKCGKL 209
D T+T L++A ++GL G+ R + P +H+ + ++ + G L
Sbjct: 334 PDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY-----SCMVDLLGRSGLL 388
Query: 210 VQAREVFDKMPVRDLVS-WNAILSG---YINARRLEEAKFIFREVPERNLLTWTVMISGL 265
A + +MP+ W A+L Y + + +A E+ R+ + ++ +
Sbjct: 389 QDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIY 448
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
+ SG +++ ++ N MK +GL ++A G +++G +IH V+
Sbjct: 449 SASGLWKDASRIRNLMKQKGL----------VRASGC-SYIEHGNKIHKFVV 489
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/556 (33%), Positives = 291/556 (52%), Gaps = 35/556 (6%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
A ++LD + + +++ +SGY+ G ++E D RK + + TY S + N
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
N Q+H+ ++R + ALI Y KCGK++ A+ VFD +++
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAE----VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL 286
I+ Y + EEA L LF++M ++ +
Sbjct: 306 NTTIMDAYFQDKSFEEA-------------------------------LNLFSKMDTKEV 334
Query: 287 EPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADM 346
P +Y +A + + L L G +H V++ G+ + + GNAL+ MYAK G + A
Sbjct: 335 PPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARK 394
Query: 347 VFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGL 406
F M + D V+WN MI+ + HG G +A++ +++M+ +P+RITF+ +L ACSH G
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 407 VKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
V++G HYF+ + + + P HY ++ LL +AG F +A+ + P E W +LL
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 467 AGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
C + N LG + AE E P G Y++LSN++A +W+ VA+VR LM RGVKK
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 527 EPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEH 586
EPG SWI I N HVFL +D HPE+ +Y +++++ +++ LGY PD HD++ E
Sbjct: 575 EPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQ 634
Query: 587 KEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXX 646
+E LS HSEKLAV YG++K P + + V KN+R+C DCH+A K ISK
Sbjct: 635 REDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSN 694
Query: 647 XXXXXXNGECSCGNYW 662
+G+CSC +YW
Sbjct: 695 RFHHFLDGQCSCCDYW 710
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 172/401 (42%), Gaps = 38/401 (9%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+D ++I YV+ + ARKL D M V+W AM+ GY G E F+ M
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 146 HSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
G + +E+ T + + N+G G+Q H L+ + E V N L+ Y+
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF----VRNTLVYMYS 182
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
C +A V D +P DL +++ LSGY+
Sbjct: 183 LCSGNGEAIRVLDDLPYCDLSVFSSALSGYL----------------------------- 213
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
E G +E L + + +E + Y +++ L L+ Q+HS++++ G ++
Sbjct: 214 --ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
+ A ALI MY KCG V YA VF + ++ A Q +A+ L+ +M
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
+++ P+ TF +L++ + L+K+G + G L+++ ++G
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGD-LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL 485
+A+K M F W ++++GC HG ++A +R+
Sbjct: 391 DARKAFSGMTFRDIVT-WNTMISGCSHHGLGREALEAFDRM 430
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 123/293 (41%), Gaps = 34/293 (11%)
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
L+ N+ G +HA+++ T +N +LI Y KC + V+AR++FD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQIN-SLINLYVKCRETVRARKLFD 93
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
MP R++VSW A++ GY N SGF E LKL
Sbjct: 94 LMPERNVVSWCAMMKGYQN-------------------------------SGFDFEVLKL 122
Query: 278 FNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
F M G P ++ K+C G ++ G+Q H ++ G S N L+ MY+
Sbjct: 123 FKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS 182
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
C G A V +PY D +++ ++ + G + + + + ED + + +T+L+
Sbjct: 183 LCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLS 242
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
L S+ + M +G + LI++ + GK A++V
Sbjct: 243 SLRLFSNLRDLNLALQVHSRM-VRFGFNAEVEACGALINMYGKCGKVLYAQRV 294
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++ Y ++ + ARK GMT V WN MISG HGL EA + F +M G
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKL 209
+ T+ ++ A + G G +++ VQP +H+ ++ +K G
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY-----TCIVGLLSKAGMF 491
Query: 210 VQAREVFDKMPVR-DLVSWNAILSG 233
A + P+ D+V+W +L+
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNA 516
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 301/566 (53%), Gaps = 36/566 (6%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + D++ A K+ + M V W+ MI+ + ++G EA D F +M + +E+T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+S+++ G QLH V V+ + V+NALI Y KC K+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLV----VKVGFDLDIYVSNALIDVYAKCEKM-------- 399
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+ A +F E+ +N ++W +I G G G ++ +
Sbjct: 400 -----------------------DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSM 436
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F + + + ++ A+ AC L S+D G Q+H I+ + ++ N+LI MYAK
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAK 496
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG + +A VF M +D SWNA+I+ + HG G QA+++ + M D P+ +TFL +
Sbjct: 497 CGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGV 556
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
LS CS+AGL+ +GQ F+SM +G+ P +HY ++ LL R+G+ +A K+ E +P+EP
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEP 616
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
S IW ++L+ N E ++AE + ++ P+ + TY+++SNMYA +W VA +RK
Sbjct: 617 SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRK 676
Query: 518 LMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKF 577
M+E GVKKEPG SWIE + VH F V + HP++ + LE L ++ + GY+PD
Sbjct: 677 SMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNA 736
Query: 578 VLHDMESEHKEHALSTHSEKLAVVYGILKLPLGAT-IRVFKNLRMCGDCHNAFKFISKXX 636
VL DM+ E K+ L HSE+LA+ YG++++P I + KNLR+C DCH+A K IS
Sbjct: 737 VLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIV 796
Query: 637 XXXXXXXXXXXXXXXXNGECSCGNYW 662
G CSCG++W
Sbjct: 797 QRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 181/410 (44%), Gaps = 57/410 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I Y + SAR + +G+ V W ++S YV +G +E++ M G
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITFYTKCGKL 209
+ YT+ + + AS G F+ + +H +L+T V+ P V L+ YT+ G +
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR------VGVGLLQLYTQLGDM 298
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
A +VF++M P+ +++ W+ MI+ ++G
Sbjct: 299 SDAFKVFNEM-------------------------------PKNDVVPWSFMIARFCQNG 327
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
F E++ LF +M+ + P ++ + + C + G+Q+H V+++G D + N
Sbjct: 328 FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN 387
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
ALI +YAKC + A +F + + VSWN +I G G +A ++ + L+ +
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR------LIDLLCRAGKF 443
+TF + L AC+ + G +G+ ++ + LID+ + G
Sbjct: 448 TEVTFSSALGACASLASMDLGVQV-------HGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 444 SEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD 493
A+ V M A W +L++G HG LG QA R+ ++ ++D
Sbjct: 501 KFAQSVFNEMETIDVAS-WNALISGYSTHG---LGRQAL-RILDIMKDRD 545
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 161/385 (41%), Gaps = 81/385 (21%)
Query: 3 RDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 61
R+ F P+ F+ S++L + I + +QLH VVK G V N L+ Y C
Sbjct: 340 REAFVVPNEFTLSSILNGCA-IGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEK 398
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 121
M +A KLF A LS K+E SW T+I GY ++L K
Sbjct: 399 ---------MDTAVKLF--AELSSKNEVSWNTVIVGY---ENLGEGGK------------ 432
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
AF FR+ + + E T++S + A + + G Q+H +
Sbjct: 433 ----------------AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+T + ++V+N+LI Y KCG + A+ VF++M D+ SWNA++SGY
Sbjct: 477 KT----NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY------- 525
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
+ G G ++L++ + MK +P + G + C
Sbjct: 526 ------------------------STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 302 VLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS-W 359
G +D GQ+ +I+ G + L ++ + + G + A + +PY SV W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLK 384
AM++A A + E++LK
Sbjct: 622 RAMLSASMNQNNEEFARRSAEEILK 646
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 16/259 (6%)
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
++ K DL + N +L+ Y+ A ++A +F E+PERN +++ + G A ++
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQD 129
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ---QIHSQVIQLGHDSSLSAGNA 330
+ L++++ EG E + + +K + SLD + +HS +++LG+DS+ G A
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLK---LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI Y+ CG V A VF + D V W +++ ++G +++L M +P+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 391 RITFLTILSACSHAGLVK--EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
TF T L A G +G H + T Y + P L+ L + G S+A K
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHG-QILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFK 303
Query: 449 VTESMPFEPSAPIWESLLA 467
V MP P W ++A
Sbjct: 304 VFNEMPKNDVVP-WSFMIA 321
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++I Y + D+ A+ + + M +WNA+ISGY HGL +A M +
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPS-EHFILSVNNALITFYTKCGKL 209
+ T+ ++S N GL + G++ ++R ++P EH+ ++ + G+L
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY-----TCMVRLLGRSGQL 602
Query: 210 VQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERN 254
+A ++ + +P ++ W A+LS +N E A+ E+ + N
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKIN 648
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 307/586 (52%), Gaps = 42/586 (7%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
Q D + +I Y L ARK+ D + V+W +MI GY +G +A F+
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 145 M------HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNA 198
+ + +D S+ISA +H++V++ +SV N
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG----VSVGNT 223
Query: 199 LITFYTKCGK--LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
L+ Y K G+ + AR++FD++ +D VS+N+I+S Y + EA +FR + + ++
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
T+ + + + A G+L G+ IH QV
Sbjct: 284 TFNAI------------------------------TLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
I++G + + G ++I MY KCG V A F M + SW AMIA HG +A+
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDL 436
+L+ M+ + P+ ITF+++L+ACSHAGL EG +F++M +G+ PG +HY ++DL
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL 433
Query: 437 LCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTY 496
L RAG +A + + M +P + IW SLLA CRIH N+EL + RLFEL G Y
Sbjct: 434 LGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYY 493
Query: 497 IILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVY 556
++LS++YA G+W +V RVR +M+ RG+ K PG S +E+ VHVFL+ D HP+ +Y
Sbjct: 494 MLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIY 553
Query: 557 KYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVF 616
++L +L ++ + GY+ +T V HD++ E KE L HSEKLA+ +GI+ G+T+ V
Sbjct: 554 EFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVV 613
Query: 617 KNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KNLR+C DCHN K ISK +G CSCG+YW
Sbjct: 614 KNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 181/376 (48%), Gaps = 47/376 (12%)
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN--CGRQLHA 178
+WN++I+ R G EA F M + + ++ I A + LF+ G+Q H
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC--SSLFDIFSGKQTHQ 100
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY-INA 237
Q + V++ALI Y+ CGKL AR+VFD++P R++VSW +++ GY +N
Sbjct: 101 QAFVFGYQSD----IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
L +A +F+++ L + ++++ L S GL I
Sbjct: 157 NAL-DAVSLFKDL--------------LVDENDDDDAMFL----DSMGL-------VSVI 190
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV--VGYADMVFLTMPYVD 355
AC + + + IHS VI+ G D +S GN L+ YAK G V A +F + D
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP-DRITFLTILSACSHAGLVKEGQHYF 414
VS+N++++ AQ G +A +++ +++K ++ + IT T+L A SH+G ++ G+
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
D + G+ +ID+ C+ G+ A+K + M + W +++AG +HG+
Sbjct: 311 DQV-IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH 368
Query: 475 IELGIQAAERLFELTP 490
A + EL P
Sbjct: 369 -------AAKALELFP 377
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLD 307
R V + ++ +W +I+ LA SG E+L F+ M+ L P ++ AIKAC L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 308 NGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALA 367
+G+Q H Q G+ S + +ALI MY+ CG + A VF +P + VSW +MI
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFL------TILSACSH--AGLVKEGQHYF 414
+G + A+ L++ +L ++ D FL +++SACS A + E H F
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 356 bits (913), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 213/665 (32%), Positives = 320/665 (48%), Gaps = 88/665 (13%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M R G +PD FSF +L + + ++ QQLHC V K G P VL L+S Y C
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLP-VSGQQLHCHVTKGGCETEPFVLTALISMYCKCG 102
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
L+A ARK+F+E P S + ++V
Sbjct: 103 ---------LVADARKVFEENPQSSQ-------------------------------LSV 122
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+NA+ISGY + +A FR+M G+ +D T L+ GR LH
Sbjct: 123 CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQC 182
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++ + ++V N+ IT Y KCG +
Sbjct: 183 VKGGLDSE----VAVLNSFITMYMKCGSV------------------------------- 207
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
E + +F E+P + L+TW +ISG +++G + L+L+ QMKS G+ P + + +C
Sbjct: 208 EAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSC 267
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
LG+ G ++ V G ++ NA I+MYA+CG + A VF MP VSW
Sbjct: 268 AHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWT 327
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
AMI HG G + L++ M+K I PD F+ +LSACSH+GL +G F +M
Sbjct: 328 AMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
Y + PG +HY+ L+DLL RAG+ EA + ESMP EP +W +LL C+IH N+++
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAEL 447
Query: 481 AAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVH 540
A ++ E P G Y+++SN+Y+ + + R+R +MRER +K+PG S++E + VH
Sbjct: 448 AFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVH 507
Query: 541 VFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALST---HSEK 597
+FL D H + V++ L++L + +L +M+ + E ST HSE+
Sbjct: 508 LFLAGDRSHEQTEEVHRMLDELETSVMELA---------GNMDCDRGEEVSSTTREHSER 558
Query: 598 LAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECS 657
LA+ +GIL G I V KNLR+C DCH K +SK +G CS
Sbjct: 559 LAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCS 618
Query: 658 CGNYW 662
C +YW
Sbjct: 619 CKDYW 623
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 7/270 (2%)
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
W V + LA ES+ L+ M G P +++ +K+C L +GQQ+H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 318 QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD--SVSWNAMIAALAQHGRGVQA 375
+ G ++ ALI+MY KCG+V A VF P SV +NA+I+ + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
++ +M + + D +T L ++ C+ + G+ C G+ I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRS-LHGQCVKGGLDSEVAVLNSFIT 199
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTPEQD 493
+ + G +++ + MP + W ++++G +G ++ E++ + P+
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 494 GTYIILSNMYAHLGKWDEVARVRKLMRERG 523
+LS+ AHLG V KL+ G
Sbjct: 259 TLVSVLSSC-AHLGAKKIGHEVGKLVESNG 287
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 295/526 (56%), Gaps = 42/526 (7%)
Query: 142 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 201
+R+M S + YT+TS+I + + G+ +H + + + + V AL+T
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY----VQAALVT 150
Query: 202 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 261
FY+KCG + AR+VFD+M PE++++ W +
Sbjct: 151 FYSKCGDMEGARQVFDRM-------------------------------PEKSIVAWNSL 179
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH 321
+SG ++G +E++++F QM+ G EP + + AC G++ G +H +I G
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 322 DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
D ++ G ALI +Y++CG VG A VF M + +W AMI+A HG G QA++L+ +
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 382 MLKEDI--LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCR 439
M ++D +P+ +TF+ +LSAC+HAGLV+EG+ + M Y + PG +H+ ++D+L R
Sbjct: 300 M-EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 440 AGKFSEAKKVTESMPF--EPSAP-IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTY 496
AG EA K + + +AP +W ++L C++H N +LG++ A+RL L P+ G +
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHH 418
Query: 497 IILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVY 556
++LSN+YA GK DEV+ +R M ++K+ G S IE+EN ++F + D H E +Y
Sbjct: 419 VMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIY 478
Query: 557 KYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVF 616
+YLE L+ +++GY P ++ V+H +E E KE AL HSEKLAV +G+LK + I +
Sbjct: 479 RYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIV 537
Query: 617 KNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KNLR+C DCH+AFK+IS NG CSC +YW
Sbjct: 538 KNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 154/336 (45%), Gaps = 54/336 (16%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
++ Y + D+ AR++ D M VAWN+++SG+ ++GL +EA F +M G + D
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN--NALITFYTKCGKLVQ 211
T+ SL+SA TG + G +H Y++ SE L+V ALI Y++CG + +
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYII------SEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
AREVFDKM ++ +W A++S Y G+G
Sbjct: 262 AREVFDKMKETNVAAWTAMISAY-------------------------------GTHGYG 290
Query: 272 EESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG-N 329
+++++LFN+M+ + G P + + + AC G ++ G+ ++ ++ + L G
Sbjct: 291 QQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK---SYRLIPGVE 347
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVS-------WNAMIAALAQHGRGVQAIQLYEQM 382
+ M G G+ D + + +D+ W AM+ A H +++ +++
Sbjct: 348 HHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
Query: 383 LKEDILPDRITFLTILSAC-SHAGLVKEGQHYFDSM 417
+ + PD +LS + +G E H D M
Sbjct: 408 IA--LEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 29/338 (8%)
Query: 236 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
+AR + +F VP + + +I ++ + + +M S + P +Y +
Sbjct: 53 SARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTS 112
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
IK+C L +L G+ +H + G AL+T Y+KCG + A VF MP
Sbjct: 113 VIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKS 172
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
V+WN++++ Q+G +AIQ++ QM + PD TF+++LSAC+ G V G
Sbjct: 173 IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG----- 227
Query: 416 SMCTHYGMTPGEDHYAR----LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
S Y ++ G D + LI+L R G +A++V + M E + W ++++
Sbjct: 228 SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGT 286
Query: 472 HGNIELGIQAAERLFELTPEQDG------TYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
HG G QA E LF + G T++ + + AH G +E V K M + +
Sbjct: 287 HG---YGQQAVE-LFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRM-TKSYR 341
Query: 526 KEPGCSWIEIENMVHVFLVDDAVHPE-VHAVYKYLEQL 562
PG +E+ HV +VD + YK++ QL
Sbjct: 342 LIPG-----VEH--HVCMVDMLGRAGFLDEAYKFIHQL 372
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 310 QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQH 369
QQ+H+ +I G+ S S LIT+ + Y ++FL++P D +N++I + ++
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH-YFDSMCTHYGMTPGED 428
+ + Y +ML ++ P TF +++ +C+ ++ G+ + ++ + +G+ D
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL----D 141
Query: 429 HY--ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF 486
Y A L+ + G A++V + MP E S W SL++G +G + IQ ++
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMP-EKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 487 ELTPEQD-GTYIILSNMYAH-----LGKW 509
E E D T++ L + A LG W
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGI 150
T +I Y R D+ AR++ D M AW AMIS Y HG ++A + F KM G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVN 196
+ T+ +++SA + GL GR ++ + ++ ++ EH + V+
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVD 354
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/675 (30%), Positives = 341/675 (50%), Gaps = 58/675 (8%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 90
+Q+H V++ G+ S+ N+L+ Y L +RK+F+ + ++ S
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLEL---------SRKVFN--SMKDRNLSS 157
Query: 91 WTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
W ++++ Y + + A LLD M P V WN+++SGY GL ++A ++M
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G++ + +SL+ A G G+ +H Y+LR + + + V LI Y K
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW----YDVYVETTLIDMYIKT 273
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV---------------- 250
G L AR VFD M +++V+WN+++SG A L++A+ + +
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 251 --------PER---------------NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
PE+ N+++WT + SG +++G +LK+F +M+ EG+
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P + +K G L L +G+++H ++ AL+ MY K G + A +
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F + SWN M+ A GRG + I + ML+ + PD ITF ++LS C ++GLV
Sbjct: 454 FWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLV 513
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
+EG YFD M + YG+ P +H + ++DLL R+G EA ++M +P A IW + L+
Sbjct: 514 QEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLS 573
Query: 468 GCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
C+IH ++EL A +RL L P Y+++ N+Y++L +W++V R+R LMR V+ +
Sbjct: 574 SCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQ 633
Query: 528 PGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHK 587
SWI+I+ VH+F + HP+ +Y L +LV EM+K GY+PDT + D+ K
Sbjct: 634 DLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEK 693
Query: 588 EHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXX 647
E L H+EKLA+ YG++K A IRV KN +C D H K++S
Sbjct: 694 EKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGAR 753
Query: 648 XXXXXNGECSCGNYW 662
+G+CSC + W
Sbjct: 754 VHHFRDGKCSCNDSW 768
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 191/383 (49%), Gaps = 18/383 (4%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y R L A KL D M +AWN ++ +R G +E+A + FR+M G + + T
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
L+ N F GRQ+H YVLR ++ + +S+ N+LI Y++ GKL +R+VF+
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESN----VSMCNSLIVMYSRNGKLELSRKVFN 148
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEE 273
M R+L SWN+ILS Y +++A + E+ + +++TW ++SG A G ++
Sbjct: 149 SMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI--QLGHDSSLSAGNAL 331
++ + +M+ GL+P + + ++A G L G+ IH ++ QL +D + L
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET--TL 266
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MY K G + YA MVF M + V+WN++++ L+ A L +M KE I PD
Sbjct: 267 IDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
IT+ ++ S + G ++ M G+ P + + + G F A KV
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 452 SMPFE---PSAPIWESLLA--GC 469
M E P+A +LL GC
Sbjct: 386 KMQEEGVGPNAATMSTLLKILGC 408
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 83/404 (20%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G +H +++ + S+ ++S A + FY +C L A ++FD+MP RD ++WN I+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVS---ASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIV- 61
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
+N R SG E++++LF +M+ G + D
Sbjct: 62 -MVNLR-----------------------------SGNWEKAVELFREMQFSGAKAYDST 91
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
++ C G+QIH V++LG +S++S N+LI MY++ G + + VF +M
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
+ SWN+++++ + G AI L ++M + PD +T+ ++LS + GL K+
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 413 YFDSMCTHYGMTPGE---------------------------------DHYAR--LIDLL 437
M G+ P D Y LID+
Sbjct: 212 VLKRMQIA-GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 438 CRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG--- 494
+ G A+ V + M + W SL++G + ++ AE L + E++G
Sbjct: 271 IKTGYLPYARMVFDMMD-AKNIVAWNSLVSGL----SYACLLKDAEALM-IRMEKEGIKP 324
Query: 495 ---TYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEI 535
T+ L++ YA LGK ++ V M+E+GV SW I
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV-VSWTAI 367
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/664 (30%), Positives = 327/664 (49%), Gaps = 80/664 (12%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+R+G P+ F+F A++ + +Q+H VK G +L ++ C+
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASL-RLPVTGKQIHALAVKCG---------RILDVFVGCS 148
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ + L ARKLFDE P RN +
Sbjct: 149 AFDMYCKTRLRDDARKLFDEIP----------------ERNLE----------------- 175
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
WNA IS V G EA + F + + + T+ + ++A + N G QLH V
Sbjct: 176 TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
LR+ +SV N LI FY KC +++
Sbjct: 236 LRSGFDTD----VSVCNGLIDFYGKC-------------------------------KQI 260
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
++ IF E+ +N ++W +++ ++ E++ L+ + + + +E D+ + + AC
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
+ L+ G+ IH+ ++ + ++ G+AL+ MY KCG + ++ F MP + V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDI--LPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
++I A G+ A+ L+E+M P+ +TF+++LSACS AG V+ G FDSM
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG 478
+ YG+ PG +HY+ ++D+L RAG A + + MP +P+ +W +L CR+HG +LG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
Query: 479 IQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENM 538
+ AAE LF+L P+ G +++LSN +A G+W E VR+ ++ G+KK G SWI ++N
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 560
Query: 539 VHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKL 598
VH F D H + L +L EM GY PD K L+D+E E K +S HSEKL
Sbjct: 561 VHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620
Query: 599 AVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSC 658
A+ +G+L LPL IR+ KNLR+CGDCH+ FKF+S +G CSC
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680
Query: 659 GNYW 662
+YW
Sbjct: 681 KDYW 684
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 195/446 (43%), Gaps = 55/446 (12%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y + D SAR +L V+W ++ISG ++G + A F +M G+ +
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
++T+ A + L G+Q+HA + KCG+++
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAV-----------------------KCGRIL--- 141
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
+VF D+ Y R ++A+ +F E+PERNL TW IS G E
Sbjct: 142 DVFVGCSAFDM---------YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPRE 192
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
+++ F + + P + + AC L+ G Q+H V++ G D+ +S N LI
Sbjct: 193 AIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
Y KC + ++++F M ++VSW +++AA Q+ +A LY + K+ +
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 394 FLTILSACSHAGLVKEGQH---YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
++LSAC+ ++ G+ + C + G + L+D+ + G ++++
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG----SALVDMYGKCGCIEDSEQAF 368
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG------TYIILSNMYA 504
+ MP E + SL+ G G +++ + E E+ P G T++ L + +
Sbjct: 369 DEMP-EKNLVTRNSLIGGYAHQGQVDMALALFE---EMAPRGCGPTPNYMTFVSLLSACS 424
Query: 505 HLGKWDEVARVRKLMRER-GVKKEPG 529
G + ++ MR G+ EPG
Sbjct: 425 RAGAVENGMKIFDSMRSTYGI--EPG 448
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 4/212 (1%)
Query: 193 LSVNNALITFYTKCGKLVQAR--EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
L + NA+ + G++V AR + D P L N +++ Y E A+ + R
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLT 68
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
P RN+++WT +ISGLA++G +L F +M+ EG+ P D+ + A KA L G+
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
QIH+ ++ G + G + MY K + A +F +P + +WNA I+ G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
R +AI+ + + + D P+ ITF L+ACS
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 3/178 (1%)
Query: 305 SLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMI 363
S+ G+ +H+++++ L N LI MY+K A +V P + VSW ++I
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLI 80
Query: 364 AALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGM 423
+ LAQ+G A+ + +M +E ++P+ TF A + L G+ ++ G
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ-IHALAVKCGR 139
Query: 424 TPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
D+ C+ +A+K+ + +P E + W + ++ G I+A
Sbjct: 140 ILDVFVGCSAFDMYCKTRLRDDARKLFDEIP-ERNLETWNAFISNSVTDGRPREAIEA 196
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 307/602 (50%), Gaps = 47/602 (7%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
M +A+KLFDE PLS+KD V W ++S +
Sbjct: 59 MVTAQKLFDEIPLSEKDN-------------------------------VDWTTLLSSFS 87
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
R+GL + F +M +++D+ + L +Q H ++ V S
Sbjct: 88 RYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS-- 145
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
+ V NAL+ Y KCG + + + +F+++ + +VSW +L + LE + +F E+
Sbjct: 146 --VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY-AYAGAIKACGVLGSLDNG 309
PERN + WTVM++G +GF E L+L +M ++ + AC G+L G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 310 QQIHSQVIQ----LGHDSS---LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
+ +H ++ +G ++S + G AL+ MYAKCG + + VF M + V+WNA+
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
+ LA HG+G I ++ QM++E + PD +TF +LSACSH+G+V EG F S+ YG
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYG 381
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
+ P DHYA ++DLL RAG EA+ + MP P+ + SLL C +HG +E+ +
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 483 ERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVF 542
L +++P I++SNMY G+ D +R +R+RG++K PG S I + + VH F
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 543 LVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMES--EHKEHALSTHSEKLAV 600
D HP +Y L +++ +R GY+PD ++ E E KE AL HSEKLAV
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAV 561
Query: 601 VYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGN 660
+G+L+ + VFKNLR+C DCH+A K +SK G CSC +
Sbjct: 562 CFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSD 621
Query: 661 YW 662
YW
Sbjct: 622 YW 623
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 158/391 (40%), Gaps = 70/391 (17%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G++LHA + + ++ + LS NAL FY G++V A+++FD++P
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLS--NALFQFYASSGEMVTAQKLFDEIP------------ 70
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
+ E++ + WT ++S + G S+KLF +M+ + +E D +
Sbjct: 71 -----------------LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVS 113
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADM------ 346
C L L QQ H +++G +S+ NAL+ MY KCG+V
Sbjct: 114 VVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELE 173
Query: 347 -------------------------VFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
VF MP ++V+W M+A G + ++L +
Sbjct: 174 EKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAE 233
Query: 382 ML-KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY------ARLI 434
M+ + + +T ++LSAC+ +G + G+ M E Y L+
Sbjct: 234 MVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALV 293
Query: 435 DLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG 494
D+ + G + V M + + W +L +G +HG + I ++ D
Sbjct: 294 DMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDL 352
Query: 495 TYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
T+ + + +H G DE R +R G++
Sbjct: 353 TFTAVLSACSHSGIVDEGWRCFHSLRFYGLE 383
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/491 (36%), Positives = 275/491 (56%), Gaps = 36/491 (7%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G +H+ V+R+ ++ V N+L+ Y CG + A +VFDKM
Sbjct: 7 GETIHSVVIRSGFGS----LIYVQNSLLHLYANCGDVASAYKVFDKM------------- 49
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
PE++L+ W +I+G AE+G EE+L L+ +M S+G++P +
Sbjct: 50 ------------------PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
+ AC +G+L G+++H +I++G +L + N L+ +YA+CG V A +F M
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILSACSHAGLVKEGQ 411
+SVSW ++I LA +G G +AI+L++ M E +LP ITF+ IL ACSH G+VKEG
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
YF M Y + P +H+ ++DLL RAG+ +A + +SMP +P+ IW +LL C +
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 472 HGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
HG+ +L A ++ +L P G Y++LSNMYA +W +V ++RK M GVKK PG S
Sbjct: 272 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 532 WIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHAL 591
+E+ N VH FL+ D HP+ A+Y L+++ +R GY+P V D+E E KE+A+
Sbjct: 332 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAV 391
Query: 592 STHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXX 651
HSEK+A+ + ++ P + I V KNLR+C DCH A K +SK
Sbjct: 392 VYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHF 451
Query: 652 XNGECSCGNYW 662
NG CSC +YW
Sbjct: 452 KNGSCSCQDYW 462
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 136/276 (49%), Gaps = 38/276 (13%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y D+ASA K+ D M VAWN++I+G+ +G EEA + +M+S GI+ D +T
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
SL+SA G G+++H Y+++ + + H +N L+ Y +CG++ +A+ +FD
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH----SSNVLLDLYARCGRVEEAKTLFD 148
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+M ++ VS WT +I GLA +GFG+E+++L
Sbjct: 149 EMVDKNSVS-------------------------------WTSLIVGLAVNGFGKEAIEL 177
Query: 278 FNQMKS-EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI-QLGHDSSLSAGNALITMY 335
F M+S EGL PC+ + G + AC G + G + ++ + + + ++ +
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 336 AKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQHG 370
A+ G V A +MP +V W ++ A HG
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 294/575 (51%), Gaps = 39/575 (6%)
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
NA+I G + +E + F M +G++ D T+ ++ ++ G GR LHA L+
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK------------------------ 218
V LS L+ Y K G+L A +VF++
Sbjct: 155 NFVDCDSFVRLS----LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 219 -----------MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
MP R+ SW+ ++ GY+++ L AK +F +PE+N+++WT +I+G ++
Sbjct: 211 DMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
+G E ++ + +M +GL+P +Y A + AC G+L +G +IH ++ G +
Sbjct: 271 TGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAI 330
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
G AL+ MYAKCG + A VF M + D +SW AMI A HGR QAIQ + QM+
Sbjct: 331 GTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE 390
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
PD + FL +L+AC ++ V G ++FDSM Y + P HY ++DLL RAGK +EA
Sbjct: 391 KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAH 450
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLG 507
++ E+MP P W +L C+ H ++ L EL PE G+YI L +A G
Sbjct: 451 ELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKG 510
Query: 508 KWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR 567
+V + R +++R ++ G S+IE++ ++ F D H + L++++
Sbjct: 511 NIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAI 570
Query: 568 KLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHN 627
+ GY P + +HD+E E KE+ HSEKLA+ G L+ G TIR+ KNLR+CGDCH+
Sbjct: 571 QKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHS 630
Query: 628 AFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K++SK +G CSCG+YW
Sbjct: 631 LMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 271/465 (58%), Gaps = 4/465 (0%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
D+ +ARK+ D V+WN +I+GY + G E+A ++ M S G++ D+ T L+S
Sbjct: 206 DMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVS 265
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
+ G N G++ + YV ++ + + NAL+ ++KCG + +AR +FD + R
Sbjct: 266 SCSMLGDLNRGKEFYEYVKENGLR----MTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 321
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
+VSW ++SGY L+ ++ +F ++ E++++ W MI G ++ G+++L LF +M+
Sbjct: 322 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 381
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG 342
+ +P + + AC LG+LD G IH + + +++ G +L+ MYAKCG +
Sbjct: 382 TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
A VF + +S+++ A+I LA HG AI + +M+ I PD ITF+ +LSAC
Sbjct: 442 EALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACC 501
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
H G+++ G+ YF M + + + P HY+ ++DLL RAG EA ++ ESMP E A +W
Sbjct: 502 HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVW 561
Query: 463 ESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRER 522
+LL GCR+HGN+ELG +AA++L EL P G Y++L MY W++ R R++M ER
Sbjct: 562 GALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNER 621
Query: 523 GVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR 567
GV+K PGCS IE+ +V F+V D PE +Y L L MR
Sbjct: 622 GVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 195/438 (44%), Gaps = 80/438 (18%)
Query: 109 KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI---QMDEYTYTSLISASF 165
K+L G+ +P +WN I G+ +E+F +++M G + D +TY L
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 225
+ L + G + +VL+ ++ H V+NA I + CG + AR+VFD+ PVRDLV
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSH----VHNASIHMFASCGDMENARKVFDESPVRDLV 223
Query: 226 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
SWN +++GY +++ EA E+++ ++ M+SEG
Sbjct: 224 SWNCLINGY---KKIGEA----------------------------EKAIYVYKLMESEG 252
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG------ 339
++P D G + +C +LG L+ G++ + V + G ++ NAL+ M++KCG
Sbjct: 253 VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEAR 312
Query: 340 -----------------VVGYA--------DMVFLTMPYVDSVSWNAMIAALAQHGRGVQ 374
+ GYA +F M D V WNAMI Q RG
Sbjct: 313 RIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD 372
Query: 375 AIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG---QHYFDSMCTHYGMTPGEDHYA 431
A+ L+++M + PD IT + LSACS G + G Y + + G
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG----T 428
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE--LT 489
L+D+ + G SEA V + S + +++ G +HG+ I + + +
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLT-YTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 490 PEQDGTYIILSNMYAHLG 507
P++ T+I L + H G
Sbjct: 488 PDEI-TFIGLLSACCHGG 504
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 164/376 (43%), Gaps = 57/376 (15%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ +G PD + ++ + S++ + ++ + V + G+ ++N L+ + C
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLN-RGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ AR++FD L ++ SWTTMI+GY R L +RKL D M V
Sbjct: 307 D---------IHEARRIFDN--LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
WNAMI G V+ ++A F++M + + DE T +SA G + G +H Y+
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 181 LRTVVQPSEHFILSVN----NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
E + LS+N +L+ Y KCG + +A VF + R
Sbjct: 416 --------EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-------------- 453
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
N LT+T +I GLA G ++ FN+M G+ P + + G
Sbjct: 454 -----------------NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 297 IKACGVLGSLDNGQQIHSQV-IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-V 354
+ AC G + G+ SQ+ + + L + ++ + + G++ AD + +MP
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 355 DSVSWNAMIAALAQHG 370
D+ W A++ HG
Sbjct: 557 DAAVWGALLFGCRMHG 572
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 195 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF------IFR 248
++N L++ KC L+ +++ +M + L+ S I L E+++ I +
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 249 EVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL---EPCDYAYAGAIKACGVLGS 305
+ N+ +W V I G +ES +ES L+ QM G P + Y K C L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 306 LDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAA 365
G I V++L + NA I M+A CG + A VF P D VSWN +I
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
+ G +AI +Y+ M E + PD +T + ++S+CS G + G+ +++ + G+
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV-KENGLRM 290
Query: 426 GEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL 485
L+D+ + G EA+++ +++ + + W ++++G G +++ + +L
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGLLDV----SRKL 345
Query: 486 FELTPEQD 493
F+ E+D
Sbjct: 346 FDDMEEKD 353
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 294/560 (52%), Gaps = 39/560 (6%)
Query: 107 ARKLLDGMTHPIAVA---WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
ARK+ D +T + W AM GY R+G +A + M I+ ++ + + A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
+ GR +HA ++V+ +E D+
Sbjct: 246 CVDLKDLRVGRGIHA-----------------------------QIVKRKEKVDQ----- 271
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
V +N +L Y+ + ++A+ +F + ERN++TW +IS L++ E LF +M+
Sbjct: 272 -VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE 330
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
E + + AC + +L G++IH+Q+++ + N+L+ MY KCG V Y
Sbjct: 331 EMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEY 390
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
+ VF M D SWN M+ A +G + I L+E M++ + PD ITF+ +LS CS
Sbjct: 391 SRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWE 463
GL + G F+ M T + ++P +HYA L+D+L RAGK EA KV E+MPF+PSA IW
Sbjct: 451 TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWG 510
Query: 464 SLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERG 523
SLL CR+HGN+ +G AA+ LF L P G Y+++SN+YA WD V ++R++M++RG
Sbjct: 511 SLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 524 VKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYL-EQLVIEMRKLGYIPDTKFVLHDM 582
VKKE GCSW+++++ + +F+ YK + +L + K GY P+T VLHD+
Sbjct: 571 VKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDV 630
Query: 583 ESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXX 642
+ E K + + HSE+LA Y ++ G IR+ KNLR+C DCH+ K +S+
Sbjct: 631 DEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVL 690
Query: 643 XXXXXXXXXXNGECSCGNYW 662
+G CSC +YW
Sbjct: 691 RDTKRFHHFVDGICSCKDYW 710
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 9/231 (3%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D+ + ++ Y+ + ARK+ DGM+ V WN++IS + E F+ FRKM
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
I T T+++ A G+++HA +L++ +P + N+L+ Y KC
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL----NSLMDMYGKC 385
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMI 262
G++ +R VFD M +DL SWN +L+ Y +EE +F + E + +T+ ++
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 263 SGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQI 312
SG +++G E L LF +MK+E + P YA + G G + ++
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKV 496
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 6/266 (2%)
Query: 238 RRLEEAKFIFREVPERNLLT---WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYA 294
RRL+ A+ IF +V + +LLT W M G + +G ++L ++ M +EP +++ +
Sbjct: 181 RRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSIS 240
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
A+KAC L L G+ IH+Q+++ N L+ +Y + G+ A VF M
Sbjct: 241 VALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSER 300
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+ V+WN++I+ L++ R + L+ +M +E I T TIL ACS + G+
Sbjct: 301 NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKE-I 359
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+ P L+D+ + G+ +++V + M + A W +L I+GN
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS-WNIMLNCYAINGN 418
Query: 475 IELGIQAAERLFELTPEQDG-TYIIL 499
IE I E + E DG T++ L
Sbjct: 419 IEEVINLFEWMIESGVAPDGITFVAL 444
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 324/643 (50%), Gaps = 71/643 (11%)
Query: 88 EPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 147
E S + ++ ++ D+ AR++ DGM+ V WN++I+ ++H +EA + +R M +
Sbjct: 99 EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 148 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS------------- 194
+ DEYT +S+ A + L ++ H + ++ S F+ S
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 195 ---------------VNNALITFYTKCGKLVQAREVFDKMPVRD---------------- 223
+ ALI Y++ G+ +A + F M V
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 224 -----------------------LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTV 260
L S ++L+ Y+ ++++ +F+ + N ++WT
Sbjct: 279 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 261 MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
+ISGL ++G E +L F +M + ++P + + A++ C L + G+QIH V + G
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
D AG+ LI +Y KCG A +VF T+ VD +S N MI + AQ+G G +A+ L+E
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
+M+ + P+ +T L++L AC+++ LV+EG FDS M DHYA ++DLL RA
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRA 517
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILS 500
G+ EA+ +T + P +W +LL+ C++H +E+ + ++ E+ P +GT I++S
Sbjct: 518 GRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMS 576
Query: 501 NMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAV-HPEVHAVYKYL 559
N+YA GKW+ V ++ M++ +KK P SW+EI H F+ D HP + + L
Sbjct: 577 NLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENL 636
Query: 560 EQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNL 619
E+L+ + + LGY+ D V DME KE +L HSEKLA+ + + + +G +IR+ KNL
Sbjct: 637 EELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNL 695
Query: 620 RMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
R+C DCH+ K +S+ +G CSCG+YW
Sbjct: 696 RVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 299/577 (51%), Gaps = 53/577 (9%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRH-GLYEEAFDTFRKMHSMG-IQMDEYTYTSL 160
D+ A ++ D + + + WN +I EEAF +RKM G D++T+ +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 220
+ A F+ G+Q+H +++ + VNN LI Y CG L AR+VFD+MP
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVY----VNNGLIHLYGSCGCLDLARKVFDEMP 213
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
R LVSWN+ MI L G + +L+LF +
Sbjct: 214 ERSLVSWNS-------------------------------MIDALVRFGEYDSALQLFRE 242
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ---LGHDSSLSAGNALITMYAK 337
M+ EP Y + AC LGSL G H+ +++ + + N+LI MY K
Sbjct: 243 MQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCK 301
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML--KEDILPDRITFL 395
CG + A+ VF M D SWNAMI A HGR +A+ +++M+ +E++ P+ +TF+
Sbjct: 302 CGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFV 361
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF 455
+L AC+H G V +G+ YFD M Y + P +HY ++DL+ RAG +EA + SMP
Sbjct: 362 GLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPM 421
Query: 456 EPSAPIWESLL-AGCRIHGNIELGIQAAERLFELTPEQD-------GTYIILSNMYAHLG 507
+P A IW SLL A C+ ++EL + A + + + G Y++LS +YA
Sbjct: 422 KPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASAS 481
Query: 508 KWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR 567
+W++V VRKLM E G++KEPGCS IEI + H F D HP+ +Y+ L+ + +R
Sbjct: 482 RWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLR 541
Query: 568 KLGYIPD-TKFVLHDMESE-HKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDC 625
+GY+PD ++ L D ++ KE++L HSE+LA+ +G++ LP IR+FKNLR+C DC
Sbjct: 542 SIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDC 601
Query: 626 HNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
H K ISK +G CSC +YW
Sbjct: 602 HEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 156/378 (41%), Gaps = 80/378 (21%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
++R +PD +F VL A + I +Q+HC +VK G V N L+ Y C
Sbjct: 142 LERGESSPDKHTFPFVLKACAYIFGFS-EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
L ARK+FDE P ++ SW +M
Sbjct: 201 CLDL---------ARKVFDEMP--ERSLVSWNSM-------------------------- 223
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
I VR G Y+ A FR+M + D YT S++SA G + G HA++
Sbjct: 224 -----IDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
LR +L V N+LI Y KCG L A +VF M RDL SWNA++ G+
Sbjct: 278 LRKCDVDVAMDVL-VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF------ 330
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM--KSEGLEPCDYAYAGAIK 298
A G EE++ F++M K E + P + G +
Sbjct: 331 -------------------------ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365
Query: 299 ACGVLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDS 356
AC G ++ G+Q +++ + +L ++ + A+ G + A + ++MP D+
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 425
Query: 357 VSWNAMIAALAQHGRGVQ 374
V W +++ A + G V+
Sbjct: 426 VIWRSLLDACCKKGASVE 443
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 189/566 (33%), Positives = 303/566 (53%), Gaps = 19/566 (3%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
PD +SF+ +L + + ++ +++ V++ G V N+L+ Y C S TL
Sbjct: 68 PDDYSFTAILSTCASLGNVKFG-RKIQSLVIRSGFCASLPVNNSLIDMYGKC-SDTL--- 122
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 127
SA K+F + ++E +W +++ Y+ + +A + M +A AWN MIS
Sbjct: 123 -----SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMIS 177
Query: 128 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQ 186
G+ G E F++M + D YT++SL++A S ++ GR +HA +L+
Sbjct: 178 GHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWS 237
Query: 187 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 246
+ + N++++FYTK G A + + V VSWN+I+ + E+A +
Sbjct: 238 SA----VEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEV 293
Query: 247 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSL 306
F PE+N++TWT MI+G +G GE++L+ F +M G++ +AY + AC L L
Sbjct: 294 FHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALL 353
Query: 307 DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAAL 366
+G+ IH +I G GNAL+ +YAKCG + AD F + D VSWN M+ A
Sbjct: 354 GHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAF 413
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPG 426
HG QA++LY+ M+ I PD +TF+ +L+ CSH+GLV+EG F+SM Y +
Sbjct: 414 GVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE 473
Query: 427 EDHYARLIDLLCRAGKFSEAKKVTES----MPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
DH +ID+ R G +EAK + + + + WE+LL C H + ELG + +
Sbjct: 474 VDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVS 533
Query: 483 ERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVF 542
+ L P ++ ++++LSN+Y G+W E VR+ M ERG+KK PGCSWIE+ N V F
Sbjct: 534 KVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTF 593
Query: 543 LVDDAVHPEVHAVYKYLEQLVIEMRK 568
+V D+ HP + + + L L EMR
Sbjct: 594 VVGDSSHPRLEELSETLNCLQHEMRN 619
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 214/455 (47%), Gaps = 41/455 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+ IA ++ +ASAR++ DGM VAWN M++ Y R GL++EA F ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D+Y++T+++S + G GR++ + V+R+ S L VNN+LI Y KC +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCAS----LPVNNSLIDMYGKCSDTLS 123
Query: 212 AREVFDKM--PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
A +VF M R+ V+W ++L Y+NA + E A +F E+P+R W +MISG A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGS-LDNGQQIHSQVIQLGHDSSLSAG 328
E L LF +M +P Y ++ + AC S + G+ +H+ +++ G S++ A
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 329 NALITMYAK----------------------------CGVVGYADM---VFLTMPYVDSV 357
N++++ Y K C +G + VF P + V
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
+W MI ++G G QA++ + +M+K + D + +L ACS L+ G+ +
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIEL 477
H G L++L + G EA + + + W ++L +HG +
Sbjct: 364 -IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHGLADQ 421
Query: 478 GIQAAERLFELTPEQDG-TYIILSNMYAHLGKWDE 511
++ + + + D T+I L +H G +E
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 150/339 (44%), Gaps = 41/339 (12%)
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
LV + ++ + R+ A+ +F +PE + + W M++ + G +E++ LF Q++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV-- 341
+P DY++ + C LG++ G++I S VI+ G +SL N+LI MY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 342 ---GYADM----------------------------VFLTMPYVDSVSWNAMIAALAQHG 370
+ DM VF+ MP + +WN MI+ A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACS-HAGLVKEGQHYFDSMCTHYGMTPGEDH 429
+ + L+++ML+ + PD TF ++++ACS + V G+ M + G + +
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEA 242
Query: 430 YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELT 489
++ + G +A + ES+ W S++ C G E ++ +F L
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVS-WNSIIDACMKIGETEKALE----VFHLA 297
Query: 490 PEQD-GTYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
PE++ T+ + Y G ++ R M + GV +
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 284/526 (53%), Gaps = 25/526 (4%)
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHF----------ILSVNNALITFYTKC--- 206
+ S N L +C + A+ L P E F L N +F KC
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQT--PCEGFRLFRSLRRNSSLPANPLSSSFALKCCIK 125
Query: 207 -----GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 261
G L ++F + D + ++ Y +A +F E+P+R+ ++W V+
Sbjct: 126 SGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVL 185
Query: 262 ISGLAESGFGEESLKLFNQMKSE---GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ 318
S + + L LF++MK++ ++P A++AC LG+LD G+Q+H + +
Sbjct: 186 FSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDE 245
Query: 319 LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQL 378
G +L+ N L++MY++CG + A VF M + VSW A+I+ LA +G G +AI+
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 379 YEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT-HYGMTPGEDHYARLIDLL 437
+ +MLK I P+ T +LSACSH+GLV EG +FD M + + + P HY ++DLL
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
Query: 438 CRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYI 497
RA +A + +SM +P + IW +LL CR+HG++ELG + L EL E+ G Y+
Sbjct: 366 GRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYV 425
Query: 498 ILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYK 557
+L N Y+ +GKW++V +R LM+E+ + +PGCS IE++ VH F+VDD HP +YK
Sbjct: 426 LLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYK 485
Query: 558 YLEQLVIEMRKLGYIPDTKFVLHDMES-EHKEHALSTHSEKLAVVYGILKLPLGATIRVF 616
L ++ +++ GY+ + LH++ES E K +AL HSEKLA+ +GIL P G TIRV
Sbjct: 486 MLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVT 545
Query: 617 KNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KNLR C DCHN KF+S G CSC ++W
Sbjct: 546 KNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 43/301 (14%)
Query: 76 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 135
K+F + LS D TT++ Y ++ A K+ D + V+WN + S Y+R+
Sbjct: 138 KIFSDGFLS--DSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRT 195
Query: 136 EEAFDTFRKMHS---MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 192
+ F KM + ++ D T + A N G + G+Q+H ++ + +
Sbjct: 196 RDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA---- 251
Query: 193 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 252
L+++N L++ Y++CG + +A +VF M R++VSW
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW------------------------- 286
Query: 253 RNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
T +ISGLA +GFG+E+++ FN+M G+ P + G + AC G + G
Sbjct: 287 ------TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMF 340
Query: 313 HSQVI--QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQH 369
++ + +L ++ + + ++ A + +M DS W ++ A H
Sbjct: 341 FDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVH 400
Query: 370 G 370
G
Sbjct: 401 G 401
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 244/421 (57%), Gaps = 4/421 (0%)
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS-EGLEPCDYAYAGAIKACG 301
AK + R ++N++TW +MI G + EE+LK M S ++P +++A ++ AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
LG L + + +HS +I G + + +AL+ +YAKCG +G + VF ++ D WNA
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHY 421
MI A HG +AI+++ +M E + PD ITFL +L+ CSH GL++EG+ YF M +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 422 GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
+ P +HY ++DLL RAG+ EA ++ ESMP EP IW SLL+ R + N ELG A
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIA 356
Query: 482 AERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHV 541
+ L+ + G Y++LSN+Y+ KW+ +VR+LM + G++K G SW+E M+H
Sbjct: 357 IQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHR 413
Query: 542 FLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVV 601
F D H E A+YK LE L+ + + G++ DT VL D+ E KE L+ HSEKLA+
Sbjct: 414 FKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALA 473
Query: 602 YGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNY 661
Y ILK G IR+ KN+RMC DCHN K +SK +G CSC +Y
Sbjct: 474 YVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDY 533
Query: 662 W 662
W
Sbjct: 534 W 534
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 172/426 (40%), Gaps = 83/426 (19%)
Query: 32 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 91
Q H + K G PS+L + ++ Y C S L AR+L +
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYL---------ARRLLLWFLSLSPGVCNI 101
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GI 150
+I ++ + A+K+L + + WN MI GYVR+ YEEA + M S I
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ +++++ S ++A G + + +H+ ++ + ++ + ILS +AL+ Y KCG +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNA--ILS--SALVDVYAKCGDIG 217
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+REVF + D+ WNA MI+G A G
Sbjct: 218 TSREVFYSVKRNDVSIWNA-------------------------------MITGFATHGL 246
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E++++F++M++E + P + G + C G L+ G++
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE------------------- 287
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
G F P ++ + AM+ L + GR +A +L E M I PD
Sbjct: 288 ---------YFGLMSRRFSIQPKLE--HYGAMVDLLGRAGRVKEAYELIESM---PIEPD 333
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+ + ++LS+ + G+ ++ Y L ++ K+ A+KV
Sbjct: 334 VVIWRSLLSSSRTYKNPELGEIAIQNLS-----KAKSGDYVLLSNIYSSTKKWESAQKVR 388
Query: 451 ESMPFE 456
E M E
Sbjct: 389 ELMSKE 394
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ ++ Y + D+ ++R++ + WNAMI+G+ HGL EA F +M + +
Sbjct: 204 SALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS 263
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV-VQPS-EHFILSVNNALITFYTKCGKL 209
D T+ L++ + GL G++ + R +QP EH+ A++ + G++
Sbjct: 264 PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY-----GAMVDLLGRAGRV 318
Query: 210 VQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+A E+ + MP+ D+V W ++LS + E + + + + + ++ + + +
Sbjct: 319 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSST 378
Query: 269 GFGEESLKLFNQMKSEGLE 287
E + K+ M EG+
Sbjct: 379 KKWESAQKVRELMSKEGIR 397
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 292/562 (51%), Gaps = 36/562 (6%)
Query: 102 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 161
+ + A + G+ P +N MI GYV +EEA + +M G + D +TY L+
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
A G+Q+H V + ++ + V N+LI Y +CG++ + VF+K+
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEAD----VFVQNSLINMYGRCGEMELSSAVFEKLES 195
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
+ S W+ M+S A G E L LF M
Sbjct: 196 KTAAS-------------------------------WSSMVSARAGMGMWSECLLLFRGM 224
Query: 282 KSE-GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
SE L+ + A+ AC G+L+ G IH +++ + ++ +L+ MY KCG
Sbjct: 225 CSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGC 284
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ A +F M ++++++AMI+ LA HG G A++++ +M+KE + PD + ++++L+A
Sbjct: 285 LDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNA 344
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
CSH+GLVKEG+ F M + P +HY L+DLL RAG EA + +S+P E +
Sbjct: 345 CSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDV 404
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
IW + L+ CR+ NIELG AA+ L +L+ G Y+++SN+Y+ WD+VAR R +
Sbjct: 405 IWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIA 464
Query: 521 ERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLH 580
+G+K+ PG S +E++ H F+ D HP+ +YK L Q+ +++ GY PD +L
Sbjct: 465 IKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILL 524
Query: 581 DMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXX 640
+++ E K+ L HS+K+A+ +G+L P G+ I++ +NLRMC DCH K IS
Sbjct: 525 NVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREI 584
Query: 641 XXXXXXXXXXXXNGECSCGNYW 662
G CSC +YW
Sbjct: 585 VVRDRNRFHLFKGGTCSCKDYW 606
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
SG+ N+ + A IFR + + + MI G EE+L +N+M G EP ++
Sbjct: 76 SGWENS--MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNF 133
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
Y +KAC L S+ G+QIH QV +LG ++ + N+LI MY +CG + + VF +
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACSHAGLVKEG 410
+ SW++M++A A G + + L+ M E ++ + ++ L AC++ G + G
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 411 QHYFDSMCTHYGMTPGEDHY-----ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESL 465
M H + L+D+ + G +A + + M + + + ++
Sbjct: 254 ------MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAM 306
Query: 466 LAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHLGKWDEVARVRKLMRERGV 524
++G +HG E ++ ++ + E D Y+ + N +H G E RV M + G
Sbjct: 307 ISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG- 365
Query: 525 KKEP 528
K EP
Sbjct: 366 KVEP 369
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-MGI 150
++I Y R ++ + + + + A +W++M+S G++ E FR M S +
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ +E S + A NTG N G +H ++LR + SE I+ V +L+ Y KCG L
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNI---SELNII-VQTSLVDMYVKCGCLD 286
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+A +F KM R N LT++ MISGLA G
Sbjct: 287 KALHIFQKMEKR-------------------------------NNLTYSAMISGLALHGE 315
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGN 329
GE +L++F++M EGLEP Y + AC G + G+++ +++++ G + +
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 330 ALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMIA 364
L+ + + G++ A ++P + V W ++
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 329 bits (843), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 297/574 (51%), Gaps = 47/574 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ YV+ L A+++ D M VA ++ GY + G +A F + + G++
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D + ++ ++ A + N G+Q+HA V + ++ +SV L+ FY KC
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE----VSVGTPLVDFYIKCSSF-- 336
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
E A F+E+ E N ++W+ +ISG +
Sbjct: 337 -----------------------------ESACRAFQEIREPNDVSWSAIISGYCQMSQF 367
Query: 272 EESLKLFNQMKSEGLEPCD-YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
EE++K F ++S+ + + Y +AC VL + G Q+H+ I+ S +A
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LITMY+KCG + A+ VF +M D V+W A I+ A +G +A++L+E+M+ + P+
Sbjct: 428 LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPN 487
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+TF+ +L+ACSHAGLV++G+H D+M Y + P DHY +ID+ R+G EA K
Sbjct: 488 SVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFM 547
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
++MPFEP A W+ L+GC H N+ELG A E L +L PE Y++ N+Y GKW+
Sbjct: 548 KNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWE 607
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
E A + KLM ER +KKE CSWI+ + +H F+V D HP+ +Y+ L++ G
Sbjct: 608 EAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------G 661
Query: 571 YIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKL--PLGATIRVFKNLRMCGDCHNA 628
++ F + +E +E L HSE+LA+ +G++ + A I+VFKNLR C DCH
Sbjct: 662 FMEGDMFQCN--MTERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEF 718
Query: 629 FKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
K +S G+CSC +YW
Sbjct: 719 AKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 193/414 (46%), Gaps = 43/414 (10%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y L A KL D M+ AV+ MIS Y G+ ++A F M + G + Y
Sbjct: 128 YCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
T+L+ + N + GRQ+HA+V+R + + S+ ++ Y KCG LV A+ VFD
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSN----TSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+M V+ V+ ++ GY A R +A LKL
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDA-------------------------------LKL 272
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F + +EG+E + ++ +KAC L L+ G+QIH+ V +LG +S +S G L+ Y K
Sbjct: 273 FVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIK 332
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI-LPDRITFLT 396
C A F + + VSW+A+I+ Q + +A++ ++ + ++ + + T+ +
Sbjct: 333 CSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTS 392
Query: 397 ILSACS-HAGLVKEGQHYFDSMC-THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
I ACS A GQ + D++ + G GE + LI + + G +A +V ESM
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGE---SALITMYSKCGCLDDANEVFESMD 449
Query: 455 FEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHLG 507
P W + ++G +GN ++ E++ + + T+I + +H G
Sbjct: 450 -NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 179/442 (40%), Gaps = 72/442 (16%)
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
++H N + +H EAF+ ++M G+ + Y+Y L A + G
Sbjct: 43 ISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHG 102
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
R LH + + PS ++ N +L
Sbjct: 103 RLLHDRMRMGIENPS-----------------------------------VLLQNCVLQM 127
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
Y R LE+A +F E+ E N ++ T MIS AE G ++++ LF+ M + G +P Y
Sbjct: 128 YCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMY 187
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY 353
+K+ +LD G+QIH+ VI+ G S+ S ++ MY KCG + A VF M
Sbjct: 188 TTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAV 247
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS----------- 402
V+ ++ Q GR A++L+ ++ E + D F +L AC+
Sbjct: 248 KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307
Query: 403 HAGLVKEGQH-----------------YFDSMCTHYG--MTPGEDHYARLIDLLCRAGKF 443
HA + K G F+S C + P + ++ +I C+ +F
Sbjct: 308 HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF 367
Query: 444 SEAKKVTESMPFEPSAPI----WESLLAGCRIHGNIELGIQAAERLFE--LTPEQDGTYI 497
EA K +S+ + ++ + + S+ C + + +G Q + L Q G
Sbjct: 368 EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESA 427
Query: 498 ILSNMYAHLGKWDEVARVRKLM 519
+++ MY+ G D+ V + M
Sbjct: 428 LIT-MYSKCGCLDDANEVFESM 448
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 271/460 (58%), Gaps = 5/460 (1%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T M+ + +D+ A +L + +++P +N++I Y + LY + ++++ +
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFE 105
Query: 152 M-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ D +T+ + + + G G+Q+H ++ + P H + NALI Y K LV
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCK--FGPRFHVV--TENALIDMYMKFDDLV 161
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A +VFD+M RD++SWN++LSGY ++++AK +F + ++ +++WT MISG G
Sbjct: 162 DAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGC 221
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E++ F +M+ G+EP + + + +C LGSL+ G+ IH + G NA
Sbjct: 222 YVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNA 281
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI MY+KCGV+ A +F M D +SW+ MI+ A HG AI+ + +M + + P+
Sbjct: 282 LIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPN 341
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
ITFL +LSACSH G+ +EG YFD M Y + P +HY LID+L RAGK A ++T
Sbjct: 342 GITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEIT 401
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
++MP +P + IW SLL+ CR GN+++ + A + L EL PE G Y++L+N+YA LGKW+
Sbjct: 402 KTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWE 461
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHP 550
+V+R+RK++R +KK PG S IE+ N+V F+ D P
Sbjct: 462 DVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 27/352 (7%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
PD F+F + + + + + +Q+H + K+G N L+ Y+
Sbjct: 107 PDRFTFPFMFKSCASLGSC-YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD------ 159
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 127
+ A K+FDE + ++D SW ++++GY R + A+ L M V+W AMIS
Sbjct: 160 ---LVDAHKVFDE--MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMIS 214
Query: 128 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
GY G Y EA D FR+M GI+ DE + S++ + G G+ +H Y R
Sbjct: 215 GYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLK 274
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 247
V NALI Y+KCG + QA ++F +M +D++SW+ ++SGY A F
Sbjct: 275 QT----GVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETF 330
Query: 248 REVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGV 302
E+ + N +T+ ++S + G +E L+ F+ M+ + +EP Y I
Sbjct: 331 NEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
G L+ +I ++ + + DS + ++ + C G D+ + M ++
Sbjct: 391 AGKLERAVEI-TKTMPMKPDSKIWG-----SLLSSCRTPGNLDVALVAMDHL 436
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 191/580 (32%), Positives = 303/580 (52%), Gaps = 44/580 (7%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGIQM 152
++ YV+ ++ +ARKL D M P V+W ++ISGY G + A F+KMH +
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 153 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 212
+EYT+ S+ A G+ +HA + + ++ + + V+++L+ Y KC + A
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRN----IVVSSSLVDMYGKCNDVETA 185
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
R VFD M GY RN+++WT MI+ A++ G
Sbjct: 186 RRVFDSMI------------GY-----------------GRNVVSWTSMITAYAQNARGH 216
Query: 273 ESLKLFNQMKS--EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E+++LF + + A I AC LG L G+ H V + G++S+ +
Sbjct: 217 EAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATS 276
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+ MYAKCG + A+ +FL + +S+ +MI A A+HG G A++L+++M+ I P+
Sbjct: 277 LLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPN 336
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+T L +L ACSH+GLV EG Y M YG+ P HY ++D+L R G+ EA ++
Sbjct: 337 YVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELA 396
Query: 451 ESMPF--EPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
+++ E A +W +LL+ R+HG +E+ +A++RL + + YI LSN YA G
Sbjct: 397 KTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGG 456
Query: 509 WDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
W++ +R M+ G KE CSWIE ++ V+VF D E + ++L+ L M++
Sbjct: 457 WEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKE 516
Query: 569 LGY------IPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMC 622
G+ I + V D++ E K+ +S H E+LA+ YG+L LP G+TIR+ NLRMC
Sbjct: 517 RGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMC 576
Query: 623 GDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
DCH AFK IS+ NG C+C +YW
Sbjct: 577 RDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 8/233 (3%)
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
D + N ++ Y+ + + A+ +F E+ E N+++WT +ISG + G + +L +F +M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 283 SEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
+ + P +Y +A KAC L G+ IH+++ G ++ ++L+ MY KC V
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 342 GYADMVFLTMPYV--DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR---ITFLT 396
A VF +M + VSW +MI A AQ+ RG +AI+L+ + DR +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQFMLAS 241
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
++SACS G ++ G+ + T G L+D+ + G S A+K+
Sbjct: 242 VISACSSLGRLQWGK-VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 43/288 (14%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTH--PIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-- 147
++++ Y + +D+ +AR++ D M V+W +MI+ Y ++ EA + FR ++
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 148 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 207
+ +++ S+ISA + G G+ H V R + + V +L+ Y KCG
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT----VVATSLLDMYAKCG 285
Query: 208 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
L A ++F ++ ++S +T MI A+
Sbjct: 286 SLSCAEKIFLRIRCHSVIS-------------------------------YTSMIMAKAK 314
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ-LGHDSSLS 326
G GE ++KLF++M + + P G + AC G ++ G + S + + G
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPY---VDSVSWNAMIAALAQHGR 371
++ M + G V A + T+ ++ W A+++A HGR
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/563 (33%), Positives = 293/563 (52%), Gaps = 38/563 (6%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y+ A KL M V+W MISGY + L ++A DT+R M ++ DE T
Sbjct: 342 YLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITV 401
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+++SA G + G +LH ++ + +++ NN LI Y+KC
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLIS---YVIVANN-LINMYSKC----------- 446
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+ +++A IF +P +N+++WT +I+GL + E+L
Sbjct: 447 --------------------KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
QMK L+P A+ AC +G+L G++IH+ V++ G NAL+ MY +
Sbjct: 487 LRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG + A F + D SWN ++ ++ G+G ++L+++M+K + PD ITF+++
Sbjct: 546 CGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
L CS + +V++G YF M YG+TP HYA ++DLL RAG+ EA K + MP P
Sbjct: 605 LCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
+W +LL CRIH I+LG +A+ +FEL + G YI+L N+YA GKW EVA+VR+
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 518 LMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKF 577
+M+E G+ + GCSW+E++ VH FL DD HP+ + LE +M ++G ++
Sbjct: 724 MMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISES 783
Query: 578 VLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXX 637
D ++ HSE+ A+ +G++ G I V KNL MC +CH+ KFISK
Sbjct: 784 SSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVR 843
Query: 638 XXXXXXXXXXXXXXXNGECSCGN 660
+GECSCG+
Sbjct: 844 REISVRDAEHFHHFKDGECSCGD 866
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 180/396 (45%), Gaps = 39/396 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I YV+ D+ SAR L D M ++WNAMISGY +G+ E + F M + +
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D T TS+ISA G GR +HAYV+ T +SV N+L Y G +
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD----ISVCNSLTQMYLNAGSWRE 350
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A ++F +M +D+VSW ++SGY E N L
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGY-----------------EYNFLP-------------- 379
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
++++ + M + ++P + A + AC LG LD G ++H I+ S + N L
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MY+KC + A +F +P + +SW ++IA L + R +A+ QM K + P+
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNA 498
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
IT L+AC+ G + G+ + G+ + L+D+ R G+ + A
Sbjct: 499 ITLTAALAACARIGALMCGKE-IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
S + ++ W LL G G + ++ +R+ +
Sbjct: 558 SQKKDVTS--WNILLTGYSERGQGSMVVELFDRMVK 591
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 170/386 (44%), Gaps = 46/386 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-I 150
+A +VR +L A + M+ +WN ++ GY + G ++EA + +M +G +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ D YT+ ++ G+++H +V+R + + V NALIT Y KCG +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD----IDVVNALITMYVKCGDV- 247
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+ A+ +F +P R++++W MISG E+G
Sbjct: 248 ------------------------------KSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E L+LF M+ ++P I AC +LG G+ IH+ VI G +S N+
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L MY G A+ +F M D VSW MI+ + +AI Y M ++ + PD
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 391 RITFLTILSACSHAGLVKEG----QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
IT +LSAC+ G + G + + Y + LI++ + +A
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN-----LINMYSKCKCIDKA 452
Query: 447 KKVTESMPFEPSAPIWESLLAGCRIH 472
+ ++P + W S++AG R++
Sbjct: 453 LDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 38/344 (11%)
Query: 126 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 185
+ G +G EEA M + + +DE + +L+ G ++++ L ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM- 124
Query: 186 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 245
+ + NA + + + G LV A VF KM R+L SWN ++ GY
Sbjct: 125 ---SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGY----------- 170
Query: 246 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK-SEGLEPCDYAYAGAIKACGVLG 304
A+ G+ +E++ L+++M G++P Y + ++ CG +
Sbjct: 171 --------------------AKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
L G+++H V++ G++ + NALITMY KCG V A ++F MP D +SWNAMI+
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMT 424
++G + ++L+ M + PD +T +++SAC G + G+ + T G
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT-GFA 329
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
L + AG + EA+K+ M + W ++++G
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS-WTTMISG 372
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 9/235 (3%)
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH 321
+ GL +G EE++KL N M+ + + + ++ C + + G +++S I L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS--IALSS 123
Query: 322 DSSLSA--GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLY 379
SSL GNA + M+ + G + A VF M + SWN ++ A+ G +A+ LY
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 380 EQML-KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLC 438
+ML + PD TF +L C + G+ + YG D LI +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV-VRYGYELDIDVVNALITMYV 242
Query: 439 RAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA--AERLFELTPE 491
+ G A+ + + MP W ++++G +G G++ A R + P+
Sbjct: 243 KCGDVKSARLLFDRMPRRDIIS-WNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 268/487 (55%), Gaps = 37/487 (7%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
++ Y + + L A K+ D ++ W+AM++GY ++G EA F +M S GI+
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
EYT +++A + G+QLH+++L+ + L AL+ Y K G L AR
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH----LFATTALVDMYAKAGCLADAR 377
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
+ FD + ER++ WT +ISG ++ EE
Sbjct: 378 KGFDCLQ-------------------------------ERDVALWTSLISGYVQNSDNEE 406
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
+L L+ +MK+ G+ P D A +KAC L +L+ G+Q+H I+ G + G+AL T
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALST 466
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
MY+KCG + ++VF P D VSWNAMI+ L+ +G+G +A++L+E+ML E + PD +T
Sbjct: 467 MYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVT 526
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
F+ I+SACSH G V+ G YF+ M G+ P DHYA ++DLL RAG+ EAK+ ES
Sbjct: 527 FVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESA 586
Query: 454 PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVA 513
+ +W LL+ C+ HG ELG+ A E+L L + TY+ LS +Y LG+ +V
Sbjct: 587 NIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVE 646
Query: 514 RVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIP 573
RV K MR GV KE GCSWIE++N HVF+V D +HP + + + +M + G++
Sbjct: 647 RVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVT 706
Query: 574 --DTKFV 578
D+ FV
Sbjct: 707 VLDSSFV 713
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 38/374 (10%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT---FRKMHSMGIQMDE 154
Y + LA A + + + V+WN++I+GY ++G ++ FR+M + I +
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 155 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 214
YT + A + GRQ HA VV+ S + V+ +L+ Y K G + +
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHAL----VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 215 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 274
VF MP R+ +W+ ++SGY R+EEA +F
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF--------------------------- 207
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
LF + K EG + DY + + + + G+QIH I+ G ++ NAL+TM
Sbjct: 208 -NLFLREKEEGSDS-DYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
Y+KC + A +F + +S++W+AM+ +Q+G ++A++L+ +M I P T
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
+ +L+ACS ++EG+ S G L+D+ +AG ++A+K + +
Sbjct: 326 VGVLNACSDICYLEEGKQ-LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 455 FEPSAPIWESLLAG 468
E +W SL++G
Sbjct: 385 -ERDVALWTSLISG 397
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 43/285 (15%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + LA ARK D + W ++ISGYV++ EEA +R+M + GI
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV--NNALITFYTKCGKL 209
++ T S++ A + G+Q+H + ++ F L V +AL T Y+KCG L
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIK------HGFGLEVPIGSALSTMYSKCGSL 474
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
VF + P +D+VSWNA MISGL+ +G
Sbjct: 475 EDGNLVFRRTPNKDVVSWNA-------------------------------MISGLSHNG 503
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI-QLGHDSSLSAG 328
G+E+L+LF +M +EG+EP D + I AC G ++ G + + Q+G D +
Sbjct: 504 QGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHY 563
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDS--VSWNAMIAALAQHGR 371
++ + ++ G + A F+ +D W +++A HG+
Sbjct: 564 ACMVDLLSRAGQLKEAKE-FIESANIDHGLCLWRILLSACKNHGK 607
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 42/319 (13%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
GR +H ++RT + N L+ FY KCGKL +A +F NAI+
Sbjct: 33 GRAVHGQIIRTGAST----CIQHANVLVNFYAKCGKLAKAHSIF-----------NAIIC 77
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES---LKLFNQMKSEGLEPC 289
+++++W +I+G +++G S ++LF +M+++ + P
Sbjct: 78 --------------------KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPN 117
Query: 290 DYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFL 349
Y AG KA L S G+Q H+ V+++ + +L+ MY K G+V VF
Sbjct: 118 AYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFA 177
Query: 350 TMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML--KEDILPDRITFLTILSACSHAGLV 407
MP ++ +W+ M++ A GR +AI+++ L KE+ F +LS+ + V
Sbjct: 178 YMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYV 237
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
G+ + G+ L+ + + +EA K+ +S + ++ W +++
Sbjct: 238 GLGRQ-IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMVT 295
Query: 468 GCRIHGNIELGIQAAERLF 486
G +G ++ R+F
Sbjct: 296 GYSQNGESLEAVKLFSRMF 314
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQ 368
G+ +H Q+I+ G + + N L+ YAKCG + A +F + D VSWN++I +Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 369 HGRGVQA----IQLYEQMLKEDILPDRITFLTILSACS--HAGLVKEGQHYFDSMCTHYG 422
+G G+ + +QL+ +M +DILP+ T I A S + V H + +G
Sbjct: 93 NG-GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 423 MTPGEDHY--ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
D Y L+ + C+AG + KV MP E + W ++++G G +E I+
Sbjct: 152 -----DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 481 AAERLFELTPE-QDGTYI---ILSNMYAHL 506
E D Y+ +LS++ A +
Sbjct: 206 VFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 219/739 (29%), Positives = 343/739 (46%), Gaps = 93/739 (12%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M +DG PD F F +L + + E + +H V+K G+ V N++L+ Y C
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVE-AGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH---- 116
+ A K F + ++D +W +++ Y +N A +L+ M
Sbjct: 231 E---------LDFATKFFRR--MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL------- 169
P V WN +I GY + G + A D +KM + GI D +T+T++IS + G+
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 170 ----FNCGRQLHAYV----------LRTVVQPSE-HFI---------LSVNNALITFYTK 205
F G +A L+ + Q SE H I + V N+L+ Y+K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINA----------RRLEEAKF---------- 245
CGKL AR+VFD + +D+ +WN++++GY A R+++A
Sbjct: 400 CGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 246 ---------------IFREVP-----ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
+F+ + +RN TW ++I+G ++G +E+L+LF +M+
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
P + AC L ++IH V++ D+ + NAL YAK G + Y+
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSR 579
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
+FL M D ++WN++I HG A+ L+ QM + I P+R T +I+ A G
Sbjct: 580 TIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMG 639
Query: 406 LVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESL 465
V EG+ F S+ Y + P +H + ++ L RA + EA + + M + PIWES
Sbjct: 640 NVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Query: 466 LAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
L GCRIHG+I++ I AAE LF L PE T I+S +YA K K R+ +K
Sbjct: 700 LTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLK 759
Query: 526 KEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESE 585
K G SWIE+ N++H F D +Y +E+ M +L D +E E
Sbjct: 760 KPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEK----MSRLDNRSDQYNGELWIEEE 815
Query: 586 HKEHALSTHSEKLAVVYGILKLPLGA--TIRVFKNLRMCGDCHNAFKFISKXXXXXXXXX 643
+E HSEK A+ +G++ + TIR+ KNLRMC DCH+ K++SK
Sbjct: 816 GREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLE 875
Query: 644 XXXXXXXXXNGECSCGNYW 662
NG+CSC +YW
Sbjct: 876 DTRCLHHFKNGDCSCKDYW 894
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 190/420 (45%), Gaps = 46/420 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T +++ Y + +A ARK+ D M W+AMI Y R + E FR M G+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D++ + ++ N G G+ +H+ V++ + L V+N+++ Y KCG+L
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC----LRVSNSILAVYAKCGELDF 234
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER------------------ 253
A + F +M RD+++WN++L Y + EEA + +E+ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 254 ---------------------NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
++ TWT MISGL +G ++L +F +M G+ P
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
A+ AC L ++ G ++HS +++G + GN+L+ MY+KCG + A VF ++
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 414
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
D +WN+MI Q G +A +L+ +M ++ P+ IT+ T++S G E
Sbjct: 415 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGC 469
F M + + +I + GK EA ++ M F P++ SLL C
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 174/400 (43%), Gaps = 45/400 (11%)
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
R+G EA + G ++ TY L+ + ++G + GR LHA +P
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-FGLFTEPD-- 114
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
+ V L++ Y KCG + AR+VFD M
Sbjct: 115 --VFVETKLLSMYAKCGCIADARKVFDSMR------------------------------ 142
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
ERNL TW+ MI + E KLF M +G+ P D+ + ++ C G ++ G+
Sbjct: 143 -ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
IHS VI+LG S L N+++ +YAKCG + +A F M D ++WN+++ A Q+G
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+ +A++L ++M KE I P +T+ ++ + G M T +G+T +
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTW 320
Query: 431 ARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+I L G +A + M P+A S ++ C I G + +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 488 LTPEQD---GTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
+ D G ++ +MY+ GK ++ +V ++ + V
Sbjct: 381 MGFIDDVLVGNSLV--DMYSKCGKLEDARKVFDSVKNKDV 418
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 263/432 (60%), Gaps = 6/432 (1%)
Query: 138 AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNN 197
A +RK+ ++ + D +T+ ++ + GRQ+H V+ S H +
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV----T 155
Query: 198 ALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP--ERNL 255
LI Y CG L AR++FD+M V+D+ WNA+L+GY ++EA+ + +P RN
Sbjct: 156 GLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNE 215
Query: 256 LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
++WT +ISG A+SG E++++F +M E +EP + + AC LGSL+ G++I S
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
V G + ++S NA+I MYAK G + A VF + + V+W +IA LA HG G +A
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEA 335
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
+ ++ +M+K + P+ +TF+ ILSACSH G V G+ F+SM + YG+ P +HY +ID
Sbjct: 336 LAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID 395
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGT 495
LL RAGK EA +V +SMPF+ +A IW SLLA +H ++ELG +A L +L P G
Sbjct: 396 LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGN 455
Query: 496 YIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAV 555
Y++L+N+Y++LG+WDE +R +M+ GVKK G S IE+EN V+ F+ D HP+V +
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERI 515
Query: 556 YKYLEQLVIEMR 567
++ L+++ ++++
Sbjct: 516 HEILQEMDLQIQ 527
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 184/384 (47%), Gaps = 55/384 (14%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
PD F+F VL +++ + W +Q+H VV +G V+ L+ Y C
Sbjct: 114 PDTFTFPFVL-KIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGG------ 166
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI--AVAWNAM 125
+ ARK+FDE + KD W ++AGY + ++ AR LL+ M + V+W +
Sbjct: 167 ---LGDARKMFDEMLV--KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCV 221
Query: 126 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 185
ISGY + G EA + F++M ++ DE T +++SA + G G ++ +YV +
Sbjct: 222 ISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281
Query: 186 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 245
+ +S+NNA+I Y K G + +A +VF+ + R++V+W
Sbjct: 282 NRA----VSLNNAVIDMYAKSGNITKALDVFECVNERNVVTW------------------ 319
Query: 246 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGS 305
T +I+GLA G G E+L +FN+M G+ P D + + AC +G
Sbjct: 320 -------------TTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366
Query: 306 LDNGQQI-HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMI 363
+D G+++ +S + G ++ +I + + G + AD V +MP+ ++ W +++
Sbjct: 367 VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Query: 364 AALAQHGRGVQAIQLYEQMLKEDI 387
AA H ++L E+ L E I
Sbjct: 427 AASNVH----HDLELGERALSELI 446
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 146/338 (43%), Gaps = 39/338 (11%)
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA---ESGFGEESLKLF 278
RD ++ + NA L A +F P N MI L+ E ++ ++
Sbjct: 45 RDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVY 104
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKC 338
++ + +P + + +K + + G+QIH QV+ G DSS+ LI MY C
Sbjct: 105 RKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSC 164
Query: 339 GVVGYADMVFLTMPYVD---------------------------------SVSWNAMIAA 365
G +G A +F M D VSW +I+
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISG 224
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
A+ GR +AI+++++ML E++ PD +T L +LSAC+ G ++ G+ S H GM
Sbjct: 225 YAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER-ICSYVDHRGMNR 283
Query: 426 GEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL 485
+ID+ ++G ++A V E + E + W +++AG HG+ + R+
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Query: 486 FEL-TPEQDGTYIILSNMYAHLGKWDEVARVRKLMRER 522
+ D T+I + + +H+G D R+ MR +
Sbjct: 343 VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 293/581 (50%), Gaps = 46/581 (7%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M ++G PD +F +L + ++LHC VVK+G+ V N L+ Y C
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
LM AR +FD +D+ S
Sbjct: 185 ---------LMDMARGVFDRRC------------------KEDVFS-------------- 203
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
WN MISGY R YEE+ + +M + T ++SA + +++H YV
Sbjct: 204 -WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
+PS L + NAL+ Y CG++ A +F M RD++SW +I+ GY+ L
Sbjct: 263 SECKTEPS----LRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+ A+ F ++P R+ ++WT+MI G +G ESL++F +M+S G+ P ++ + AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
LGSL+ G+ I + + + + + GNALI MY KCG A VF M D +W
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
AM+ LA +G+G +AI+++ QM I PD IT+L +LSAC+H+G+V + + +F M +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
+ + P HY ++D+L RAG EA ++ MP P++ +W +LL R+H + +
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 481 AAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVH 540
AA+++ EL P+ Y +L N+YA +W ++ VR+ + + +KK PG S IE+ H
Sbjct: 559 AAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAH 618
Query: 541 VFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHD 581
F+ D H + +Y LE+L E Y+PDT +L +
Sbjct: 619 EFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFE 659
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 196/466 (42%), Gaps = 81/466 (17%)
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 150
W + + G+V + A KL + P V WN MI G+ + E + M G+
Sbjct: 76 WCSRLGGHV-----SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGV 130
Query: 151 QMDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
D +T+ L++ + G CG++LH +V++ + + L V NAL+ Y+ CG +
Sbjct: 131 TPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSN----LYVQNALVKMYSLCGLM 186
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
AR VFD RR +E ++ +W +MISG
Sbjct: 187 DMARGVFD--------------------RRCKE-----------DVFSWNLMISGYNRMK 215
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
EES++L +M+ + P + AC + D +++H V + + SL N
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 330 ALITMYAKCG-----------------------VVGY--------ADMVFLTMPYVDSVS 358
AL+ YA CG V GY A F MP D +S
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ---HYFD 415
W MI + G ++++++ +M ++PD T +++L+AC+H G ++ G+ Y D
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
+ G LID+ + G +A+KV M + W +++ G +G
Sbjct: 396 KNKIKNDVVVGN----ALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQG 450
Query: 476 ELGIQAAERLFELTPEQDG-TYIILSNMYAHLGKWDEVARVRKLMR 520
+ I+ ++ +++ + D TY+ + + H G D+ + MR
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMR 496
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 297/534 (55%), Gaps = 19/534 (3%)
Query: 2 KRDGFAPDPFSFSTVLGAMSLIAEEEWHC-QQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
K F+ D + +TVL A + + E C +Q+H ++ GV C + ++L++ Y C
Sbjct: 179 KELNFSADAITLTTVLKACAEL--EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ MAS + + + D+ S + +I+GY + +R L D ++ +
Sbjct: 237 D-------LRMAS----YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
WN+MISGY+ + + EA F +M + + D T ++I+A G G+Q+H +
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
+ + + V + L+ Y+KCG ++A ++F ++ D + N+++ Y + R+
Sbjct: 345 CKFGLIDD----IVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRI 400
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
++AK +F + ++L++W M +G +++G E+L+ F+QM L + + + I AC
Sbjct: 401 DDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISAC 460
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
+ SL+ G+Q+ ++ +G DS ++LI +Y KCG V + VF TM D V WN
Sbjct: 461 ASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWN 520
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
+MI+ A +G+G +AI L+++M I P +ITF+ +L+AC++ GLV+EG+ F+SM
Sbjct: 521 SMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVD 580
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
+G P ++H++ ++DLL RAG EA + E MPF+ +W S+L GC +G +G +
Sbjct: 581 HGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKK 640
Query: 481 AAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
AAE++ EL PE Y+ LS ++A G W+ A VRKLMRE V K PG SW +
Sbjct: 641 AAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 209/433 (48%), Gaps = 43/433 (9%)
Query: 72 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 131
++ + FD P ++D SW +++G+ + +L+ AR+L + M V N+++ GY+
Sbjct: 110 GTSLRFFDMMP--ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 132 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 191
+G EEA F++++ D T T+++ A CG+Q+HA +L V+
Sbjct: 168 NGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK- 223
Query: 192 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 251
+N++L+ Y KCG L A + +++ D S +A++SGY N R+ E++ +F
Sbjct: 224 ---MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKS 280
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
R ++ W MISG + E+L LFN+M++E E A I AC LG L+ G+Q
Sbjct: 281 NRCVILWNSMISGYIANNMKMEALVLFNEMRNETRED-SRTLAAVINACIGLGFLETGKQ 339
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGV------------------------------- 340
+H + G + + L+ MY+KCG
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ A VF + +SWN+M +Q+G V+ ++ + QM K D+ D ++ +++SA
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
C+ ++ G+ F + T G+ + + LIDL C+ G ++V ++M P
Sbjct: 460 CASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP 518
Query: 461 IWESLLAGCRIHG 473
W S+++G +G
Sbjct: 519 -WNSMISGYATNG 530
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 163/377 (43%), Gaps = 77/377 (20%)
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
RQ + +L+ S I+ V N L+ Y++ GK+ AR +FD+MP R+ SWN ++ G
Sbjct: 46 RQTNGLLLKKGFLSS---IVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEG 102
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVMISGLAES------------------------- 268
Y+N+ + F +PER+ +W V++SG A++
Sbjct: 103 YMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 269 ------GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
G+ EE+L+LF ++ +KAC L +L G+QIH+Q++ G +
Sbjct: 163 HGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVE 219
Query: 323 SSLSAGNALITMYAKCG-----------------------VVGYAD--MVFLTMPYVDSV 357
++L+ +YAKCG + GYA+ V + D
Sbjct: 220 CDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRK 279
Query: 358 S------WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
S WN+MI+ + ++A+ L+ +M + + D T +++AC G ++ G+
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGK 338
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
C +G+ + L+D+ + G EA K+ + ++++L I
Sbjct: 339 QMHCHAC-KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEV------ESYDTILLNSMI 391
Query: 472 HGNIELG-IQAAERLFE 487
G I A+R+FE
Sbjct: 392 KVYFSCGRIDDAKRVFE 408
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/461 (36%), Positives = 266/461 (57%), Gaps = 8/461 (1%)
Query: 102 DDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLI 161
D + A + +++P + AMI G+V G + + +M + D Y TS++
Sbjct: 75 DSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL 134
Query: 162 SASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV 221
A L C R++HA VL+ S SV ++ Y K G+LV A+++FD+MP
Sbjct: 135 KA---CDLKVC-REIHAQVLKLGFGSSR----SVGLKMMEIYGKSGELVNAKKMFDEMPD 186
Query: 222 RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
RD V+ +++ Y ++EA +F++V ++ + WT MI GL + ++L+LF +M
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
+ E + ++ + AC LG+L+ G+ +HS V + S GNALI MY++CG +
Sbjct: 247 QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDI 306
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
A VF M D +S+N MI+ LA HG V+AI + M+ P+++T + +L+AC
Sbjct: 307 NEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
SH GL+ G F+SM + + P +HY ++DLL R G+ EA + E++P EP +
Sbjct: 367 SHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIM 426
Query: 462 WESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRE 521
+LL+ C+IHGN+ELG + A+RLFE GTY++LSN+YA GKW E +R+ MR+
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRD 486
Query: 522 RGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
G++KEPGCS IE++N +H FLV D HP A+Y+ L++L
Sbjct: 487 SGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 186/453 (41%), Gaps = 86/453 (18%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M + PD + ++VL A L C+++H V+K G SV ++ Y
Sbjct: 118 MIHNSVLPDNYVITSVLKACDLKV-----CREIHAQVLKLGFGSSRSVGLKMMEIY--GK 170
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S LV +A+K+FDE P +D + T MI Y + A +L + V
Sbjct: 171 SGELV-------NAKKMFDEMP--DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
W AMI G VR+ +A + FR+M + +E+T ++SA + G GR +H++V
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++ S V NALI Y++CG + +AR VF M +D++S+N
Sbjct: 282 ENQRMELSNF----VGNALINMYSRCGDINEARRVFRVMRDKDVISYNT----------- 326
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
MISGLA G E++ F M + G P + AC
Sbjct: 327 --------------------MISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNAC 366
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
G LD G ++ + + + VF P ++ +
Sbjct: 367 SHGGLLDIGLEVFNSMKR----------------------------VFNVEPQIE--HYG 396
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
++ L + GR +A + E + I PD I T+LSAC G ++ G+ +
Sbjct: 397 CIVDLLGRVGRLEEAYRFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE- 452
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
P Y L +L +GK+ E+ ++ ESM
Sbjct: 453 -SENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
IH+++I+ HD LI + + V YA VF + + + AMI GR
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACS-------HAGLVKEGQHYFDSMCTHYGMT 424
+ LY +M+ +LPD ++L AC HA ++K G
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLK------------LGFG 155
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
+++++ ++G+ AKK+ + MP
Sbjct: 156 SSRSVGLKMMEIYGKSGELVNAKKMFDEMP 185
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 265/481 (55%), Gaps = 6/481 (1%)
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 150
W +++ Y+ + A K+ M HP ++N MI GY + G EA + KM S GI
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ DEYT SL+ + G+ +H ++ R S + ILS NAL+ Y KC +
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS--NALLDMYFKCKESG 286
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A+ FD M +D+ SWN ++ G++ +E A+ +F ++P+R+L++W ++ G ++ G
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 271 GEESLK-LFNQMK-SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
+ +++ LF +M E ++P I G L +G+ +H VI+L
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
+ALI MY KCG++ A MVF T D W +MI LA HG G QA+QL+ +M +E +
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
P+ +T L +L+ACSH+GLV+EG H F+ M +G P +HY L+DLLCRAG+ EAK
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 449 VTE-SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLG 507
+ + MP PS +W S+L+ CR +IE A L +L PE++G Y++LSN+YA +G
Sbjct: 527 IVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVG 586
Query: 508 KWDEVARVRKLMRERGVKKEPG-CSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEM 566
+W + R+ M RGVKK G S + +E + + HP + + L+ L EM
Sbjct: 587 RWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEM 646
Query: 567 R 567
+
Sbjct: 647 K 647
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 179/392 (45%), Gaps = 58/392 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYIC 58
M DG PD ++ ++L +++ + +H + + G + +++ N LL Y
Sbjct: 223 MVSDGIEPDEYTVLSLLVCCGHLSDIRLG-KGVHGWIERRGPVYSSNLILSNALLDMYFK 281
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
C S L A++ FD + +KD SW TM+ G+VR D+ +A+ + D M
Sbjct: 282 CKESGL---------AKRAFD--AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 119 AVAWNAMISGYVRHGLYEEAF-DTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQL 176
V+WN+++ GY + G + + F +M + ++ D T SLIS + N G + GR +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H V+R ++ +++ALI Y KCG + +A VF +D+
Sbjct: 391 HGLVIRLQLKGDAF----LSSALIDMYCKCGIIERAFMVFKTATEKDVA----------- 435
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
WT MI+GLA G G+++L+LF +M+ EG+ P +
Sbjct: 436 --------------------LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 297 IKACGVLGSLDNGQQIHSQVI-QLGHDSSLSAGNALITMYAKCGVVGYA-DMVFLTMPYV 354
+ AC G ++ G + + + + G D +L+ + + G V A D+V MP
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 355 DSVS-WNAMIAALAQHGRGVQAIQLYEQMLKE 385
S S W ++++A RG + I+ E L E
Sbjct: 536 PSQSMWGSILSAC----RGGEDIETAELALTE 563
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 305/608 (50%), Gaps = 44/608 (7%)
Query: 64 LVESPVLMASAR--KLFDEAPLSQKDEPSWTTM---IAGYVRNDDLASARKLLDGMTHPI 118
LVE+ + + S R K +S EP M + +V+ + AR+L D +
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
++ ++ISG+V G Y EAF+ F+ M + +T+ ++ AS G G+QLH
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
L+ V + V+ LI Y+KCG + AR F+ MP
Sbjct: 249 CALKLGVVDNTF----VSCGLIDMYSKCGDIEDARCAFECMP------------------ 286
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
E+ + W +I+G A G+ EE+L L M+ G+ + + I+
Sbjct: 287 -------------EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIR 333
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
L L+ +Q H+ +I+ G +S + A AL+ Y+K G V A VF +P + +S
Sbjct: 334 ISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
WNA++ A HGRG A++L+E+M+ ++ P+ +TFL +LSAC+++GL ++G F SM
Sbjct: 394 WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMS 453
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG 478
+G+ P HYA +I+LL R G EA P + + +W +LL CR+ N+ELG
Sbjct: 454 EVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELG 513
Query: 479 IQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENM 538
AE+L+ + PE+ G Y+++ NMY +GK E A V + + +G+ P C+W+E+ +
Sbjct: 514 RVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQ 573
Query: 539 VHVFLVDDAVHPEVHAV----YKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTH 594
H FL D V Y+ +++L+ E+ + GY + + +L D++ + +E H
Sbjct: 574 THSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYH 633
Query: 595 SEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNG 654
SEKLA+ YG++ P +++ +N R+C +CH +FIS G
Sbjct: 634 SEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEG 693
Query: 655 ECSCGNYW 662
+CSCG YW
Sbjct: 694 KCSCGGYW 701
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 161/366 (43%), Gaps = 66/366 (18%)
Query: 135 YEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 193
+ EAF+ F + ++ TY +L+ A C ++++ +++ +P ++ +
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM- 161
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
N ++ + KCG ++ AR +FD++P R+L S+ +I+SG++N
Sbjct: 162 ---NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN----------------- 201
Query: 254 NLLTWTVMISGLAESGFGE--ESLKLFNQMKSEGLEPCD-YAYAGAIKACGVLGSLDNGQ 310
FG E+ +LF M E L C+ + +A ++A LGS+ G+
Sbjct: 202 ----------------FGNYVEAFELFKMMWEE-LSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
Q+H ++LG + LI MY+KCG + A F MP +V+WN +IA A HG
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTI-----------LSACSHAGLVKEGQHYFDSMCT 419
+A+ L M + D+ T + L+ +HA L++ G F+S
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG---FESEIV 361
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
L+D + G+ A+ V + +P + W +L+ G HG +
Sbjct: 362 ---------ANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAV 411
Query: 480 QAAERL 485
+ E++
Sbjct: 412 KLFEKM 417
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 278/501 (55%), Gaps = 17/501 (3%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
++ A LF E P +++ SW TMI GY ++ + A +L D M V+WN+M+ V
Sbjct: 125 LSIAEMLFQEMP--ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALV 182
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
+ G +EA + F +M + D ++T+++ G + R+L + E
Sbjct: 183 QRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM-------PER 231
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
I+S N A+IT Y + ++ +A ++F MP RD SWN +++G+I R + +A +F +
Sbjct: 232 NIISWN-AMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNG 309
PE+N+++WT MI+G E+ EE+L +F++M +G ++P Y + AC L L G
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 350
Query: 310 QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT--MPYVDSVSWNAMIAALA 367
QQIH + + H + +AL+ MY+K G + A +F + D +SWN+MIA A
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
HG G +AI++Y QM K P +T+L +L ACSHAGLV++G +F + + E
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE 470
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+HY L+DL RAG+ + S + ++L+ C +H + + + +++ E
Sbjct: 471 EHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLE 530
Query: 488 LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDA 547
+ GTY+++SN+YA GK +E A +R M+E+G+KK+PGCSW+++ H+F+V D
Sbjct: 531 TGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDK 590
Query: 548 VHPEVHAVYKYLEQLVIEMRK 568
HP+ A+ L L +MRK
Sbjct: 591 SHPQFEALDSILSDLRNKMRK 611
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 213/425 (50%), Gaps = 30/425 (7%)
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
SS S L R ++ + + +P W +I + +A ARKL DG+ V
Sbjct: 21 SSDNDRSVQLFNLVRSIYSSSSRPRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVV 78
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
W +I+GY++ G EA + F ++ S + + T+T+++S + + L
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQ-- 133
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
+ E ++S N +I Y + G++ +A E+FD+MP R++VSWN+++ + R+
Sbjct: 134 -----EMPERNVVSW-NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRI 187
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+EA +F +P R++++WT M+ GLA++G +E+ +LF+ M + ++ I
Sbjct: 188 DEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGY 243
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
+D Q+ Q+ + ++ N +IT + + + A +F MP + +SW
Sbjct: 244 AQNNRIDEADQL----FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACSH-AGLVKEGQ--HYFDS 416
MI ++ +A+ ++ +ML++ + P+ T+++ILSACS AGLV EGQ H S
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIHQLIS 358
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES-MPFEPSAPIWESLLAGCRIHGNI 475
H E + L+++ ++G+ A+K+ ++ + + W S++A HG+
Sbjct: 359 KSVH---QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 476 ELGIQ 480
+ I+
Sbjct: 416 KEAIE 420
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 202/462 (43%), Gaps = 85/462 (18%)
Query: 155 YTYTSLISASFN---TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
Y +S+ +S N LFN R +++ R V E LI K GK+ +
Sbjct: 13 YKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEW--------LIGELCKVGKIAE 64
Query: 212 AREVFDKMPVRD--------------------------------LVSWNAILSGYINARR 239
AR++FD +P RD +V+W A++SGY+ +++
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQ 124
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
L A+ +F+E+PERN+++W MI G A+SG +++L+LF++M + ++ +KA
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKA 180
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
G +D + ++ + + + A++ AK G V A +F MP + +SW
Sbjct: 181 LVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISW 236
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
NAMI AQ+ R +A QL++ M + D ++ T+++ G ++ + + C
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMIT-----GFIRNRE--MNKACG 285
Query: 420 HYGMTPGED--HYARLIDLLCRAGKFSEAKKVTESM----PFEPSAPIWESLLAGCRIHG 473
+ P ++ + +I + EA V M +P+ + S+L+ C
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 474 NIELGIQAAERLFELTPEQDGTYII--LSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
+ G Q +L + Q + L NMY+ G E+ RK+ V + S
Sbjct: 346 GLVEG-QQIHQLISKSVHQKNEIVTSALLNMYSKSG---ELIAARKMFDNGLVCQRDLIS 401
Query: 532 WIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIP 573
W +M+ V+ H H K ++ +MRK G+ P
Sbjct: 402 W---NSMIAVY-----AH---HGHGKEAIEMYNQMRKHGFKP 432
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/598 (31%), Positives = 300/598 (50%), Gaps = 80/598 (13%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M G PD +FS++L ++S E+ C+Q+HC +++ + L+ L+
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEY-CKQIHCYIMRHSIS-----LDIFLT------ 378
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ +I Y + ++ A+ + V
Sbjct: 379 -------------------------------SALIDAYFKCRGVSMAQNIFSQCNSVDVV 407
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+ AMISGY+ +GLY ++ + FR + + I +E T S++ GR+LH ++
Sbjct: 408 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 467
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++ ++ A+I Y KCG++ A E+F++
Sbjct: 468 IKKGFDNR----CNIGCAVIDMYAKCGRMNLAYEIFER---------------------- 501
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+ +R++++W MI+ A+S ++ +F QM G+ + + A+ AC
Sbjct: 502 ---------LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
L S G+ IH +I+ S + + + LI MYAKCG + A VF TM + VSWN
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 361 AMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
++IAA HG+ ++ L+ +M+ K I PD+ITFL I+S+C H G V EG +F SM
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
YG+ P ++HYA ++DL RAG+ +EA + +SMPF P A +W +LL CR+H N+EL
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
A+ +L +L P G Y+++SN +A+ +W+ V +VR LM+ER V+K PG SWIEI
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRT 792
Query: 540 HVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEK 597
H+F+ D HPE +Y L L+ E+R GYIP LH ES K + +S EK
Sbjct: 793 HLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLHP-ESSRKVYPVSRFIEK 849
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 172/400 (43%), Gaps = 59/400 (14%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++I Y+ + KL D + V WN M++GY + G + F M I
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ T+ ++S + L + G QLH V+ + V F S+ N+L++ Y+KCG+
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD----FEGSIKNSLLSMYSKCGRFDD 292
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A ++F M D V+WN ++SGY+ +SG
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYV-------------------------------QSGLM 321
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EESL F +M S G+ P ++ + + +L+ +QIH +++ + +AL
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSAL 381
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I Y KC V A +F VD V + AMI+ +G + +++++ ++K I P+
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 392 ITFLTILSACS-----------HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
IT ++IL H ++K+G FD+ C + +ID+ +
Sbjct: 442 ITLVSILPVIGILLALKLGRELHGFIIKKG---FDNRC---------NIGCAVIDMYAKC 489
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
G+ + A ++ E + + W S++ C N I
Sbjct: 490 GRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAID 528
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 35/281 (12%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
WN++IS +VR+GL +A + KM G+ D T+ L+ A F G + +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTV 164
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
++ F+ S +LI Y + GK+ ++FD++ +D V WN +L+GY
Sbjct: 165 SSLGMDCNEFVAS---SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY------- 214
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
A+ G + +K F+ M+ + + P + + C
Sbjct: 215 ------------------------AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
+D G Q+H V+ G D S N+L++MY+KCG A +F M D+V+WN
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
MI+ Q G +++ + +M+ +LPD ITF ++L + S
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 118/309 (38%), Gaps = 35/309 (11%)
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 219
L+ A N L G+Q+HA+++ + + + ++ Y CG ++F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSY----TDERILGMYAMCGSFSDCGKMFYRL 96
Query: 220 PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFN 279
+R ++ W +IS +G ++L +
Sbjct: 97 DLR-----------------------------RSSIRPWNSIISSFVRNGLLNQALAFYF 127
Query: 280 QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG 339
+M G+ P + +KAC L + + V LG D + ++LI Y + G
Sbjct: 128 KMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG 187
Query: 340 VVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
+ +F + D V WN M+ A+ G I+ + M + I P+ +TF +LS
Sbjct: 188 KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 400 ACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSA 459
C+ L+ G + G+ L+ + + G+F +A K+ M
Sbjct: 248 VCASKLLIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 460 PIWESLLAG 468
W +++G
Sbjct: 306 VTWNCMISG 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 40/261 (15%)
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
++AC L G+Q+H+ +I ++ MYA CG +F + S
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 357 V--SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
WN++I++ ++G QA+ Y +ML + PD TF ++ AC K G +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFL 160
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+ GM E + LI GK K+ + + + IW +L G G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYAKCGA 219
Query: 475 IE------------------------LGIQAAERLFELTPEQDGTYII------------ 498
++ L + A++ L +L + G ++
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 499 LSNMYAHLGKWDEVARVRKLM 519
L +MY+ G++D+ +++ ++M
Sbjct: 280 LLSMYSKCGRFDDASKLFRMM 300
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 264/480 (55%), Gaps = 35/480 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 150
MI+ Y ++ A+++ DG+ ++WN+MI+G+ +H L E AF+ F +M +
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ D YTYT L+SA G+ LH V++ ++ + S NALI+ Y +
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ----VTSATNALISMYIQ----- 352
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+E+A +F + ++L++W +I+G A+ G
Sbjct: 353 ------------------------FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGL 388
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E+++K F+ ++S ++ DYA++ +++C L +L GQQIH+ + G S+ ++
Sbjct: 389 SEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISS 448
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDS-VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
LI MY+KCG++ A F + S V+WNAMI AQHG G ++ L+ QM +++
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
D +TF IL+ACSH GL++EG + M Y + P +HYA +DLL RAG ++AK++
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
ESMP P + ++ L CR G IE+ Q A L E+ PE TY+ LS+MY+ L KW
Sbjct: 569 IESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKW 628
Query: 510 DEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
+E A V+K+M+ERGVKK PG SWIEI N V F +D +P +Y ++ L EM+ L
Sbjct: 629 EEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWL 688
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 153/310 (49%), Gaps = 35/310 (11%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
++ Y++ L A L D M +V+WN MISGY G E+A+ F M G +D
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
Y+++ L+ + F+ G Q+H V++ + + + V ++L+ Y KC ++ A
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY----VGSSLVDMYAKCERVEDAF 156
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
E F ++ + VSWNA+++G++ R ++ A ++ + + +T ++G
Sbjct: 157 EAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT--------MDAGTFAP 208
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
L L + +P C +L +Q+H++V++LG ++ NA+I+
Sbjct: 209 LLTLLD-------DPM---------FCNLL------KQVHAKVLKLGLQHEITICNAMIS 246
Query: 334 MYAKCGVVGYADMVFLTM-PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
YA CG V A VF + D +SWN+MIA ++H A +L+ QM + + D
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 393 TFLTILSACS 402
T+ +LSACS
Sbjct: 307 TYTGLLSACS 316
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
+ D+ N IL YI L A +F E+P+R+ ++W MISG G E++ LF
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
MK G + Y+++ +K + D G+Q+H VI+ G++ ++ G++L+ MYAKC
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILS 399
V A F + +SVSWNA+IA Q A L M +K + D TF +L+
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 400 A------CS-----HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
C+ HA ++K G + ++C +I G S+AK+
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICN------------AMISSYADCGSVSDAKR 259
Query: 449 VTESMPFEPSAPIWESLLAGCRIH 472
V + + W S++AG H
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKH 283
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
H I+ G S + N ++ Y K G +GYA+M+F MP DSVSWN MI+ G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
A L+ M + D +F +L + G+ + G +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQ-VHGLVIKGGYECNVYVGSS 141
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
L+D+ + + +A + + + EP++ W +L+AG
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 265/464 (57%), Gaps = 6/464 (1%)
Query: 115 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA--SFNTGLFNC 172
T V+W + I+ R+G EA F M G++ + T+ +L+S F +G
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G LH Y + + + + V A+I Y+K G+ +AR VFD M ++ V+WN ++
Sbjct: 92 GDLLHGYACKLGLDRNH---VMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
GY+ + +++ A +F ++PER+L++WT MI+G + G+ EE+L F +M+ G++P A
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
A+ AC LG+L G +H V+ +++ N+LI +Y +CG V +A VF M
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
VSWN++I A +G +++ + +M ++ PD +TF L+ACSH GLV+EG
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
YF M Y ++P +HY L+DL RAG+ +A K+ +SMP +P+ + SLLA C H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 473 G-NIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
G NI L + + L +L + Y+ILSNMYA GKW+ +++R+ M+ G+KK+PG S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 532 WIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDT 575
IEI++ +HVF+ D H E + + LE + ++R G + +T
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 164/337 (48%), Gaps = 53/337 (15%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
AR +FD + K+ +W TMI GY+R+ + +A K+ D M ++W AMI+G+V+ G
Sbjct: 128 ARLVFDY--MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKG 185
Query: 134 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 193
EEA FR+M G++ D + ++A N G + G +H YVL + + +
Sbjct: 186 YQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN----V 241
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
V+N+LI Y +CG + AR+VF M R +VSWN+++ G+
Sbjct: 242 RVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGF------------------- 282
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
A +G ESL F +M+ +G +P + GA+ AC +G ++ G + +
Sbjct: 283 ------------AANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-Y 329
Query: 314 SQVIQLGHDSS--LSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHG 370
Q+++ + S + L+ +Y++ G + A + +MP + V +++AA + HG
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
I L E+++K LT L+ SH+ V
Sbjct: 390 NN---IVLAERLMKH---------LTDLNVKSHSNYV 414
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 321/665 (48%), Gaps = 53/665 (7%)
Query: 4 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 63
+GF D F+ ST+L + + + ++LH ++ G+M SV N L+ Y
Sbjct: 279 EGFGVDSFTLSTLLSSCT-DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMK 337
Query: 64 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 123
VES M A +D ++T MI Y+ + SA ++ +T + +N
Sbjct: 338 KVESLYEMMMA-----------QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYN 386
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR- 182
A+++G+ R+G +A F M G+++ +++ TS + A Q+H + ++
Sbjct: 387 ALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKF 446
Query: 183 -TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
T P + AL+ T+C ++ A E+FD+ P L+
Sbjct: 447 GTAFNPC------IQTALLDMCTRCERMADAEEMFDQWP-----------------SNLD 483
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA-C 300
+K T +I G A +G ++++ LF++ E D I A C
Sbjct: 484 SSK------------ATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
G LG + G QIH ++ G+ S +S GN+LI+MYAKC A +F TM D +SWN
Sbjct: 532 GTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWN 591
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC--SHAGLVKEGQHYFDSMC 418
++I+ G +A+ L+ +M +++I PD IT ++SA + + + + F SM
Sbjct: 592 SLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMK 651
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG 478
T Y + P +HY + +L G EA+ SMP +P + +LL CRIH N +
Sbjct: 652 TIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVA 711
Query: 479 IQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENM 538
+ A+ + PE YI+ SN+Y+ G W +R+ MRERG +K P SWI EN
Sbjct: 712 KRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENK 771
Query: 539 VHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKL 598
+H F D HP+ +Y+ LE L++E K+GY P+T++VL +++ K+ L HS KL
Sbjct: 772 IHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKL 831
Query: 599 AVVYGILKLPL-GATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECS 657
AV YGIL G +RV KN+ +CGDCH FK+IS NG+CS
Sbjct: 832 AVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCS 891
Query: 658 CGNYW 662
C + W
Sbjct: 892 CRDLW 896
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 199/415 (47%), Gaps = 50/415 (12%)
Query: 1 MKRDGFA-PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M++ G P+ ++F +L A ++ Q +H +VK G + V N+L+S Y
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ-IHGLIVKSGFLNSVFVSNSLMSLYDKD 229
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
+ S+ + KLFDE P Q+D
Sbjct: 230 SGSSCDD-------VLKLFDEIP--QRD-------------------------------V 249
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
+WN ++S V+ G +AFD F +M+ + G +D +T ++L+S+ ++ + GR+LH
Sbjct: 250 ASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
+R + LSVNNALI FY+K + + +++ M +D V++ +++ Y++
Sbjct: 310 RAIRIGLMQE----LSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFG 365
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
++ A IF V E+N +T+ +++G +G G ++LKLF M G+E D++ A+
Sbjct: 366 MVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVD 425
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP--YVDS 356
ACG++ +QIH I+ G + AL+ M +C + A+ +F P S
Sbjct: 426 ACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSS 485
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILSACSHAGLVKEG 410
+ ++I A++G +A+ L+ + L ++ + D ++ IL+ C G + G
Sbjct: 486 KATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 167/377 (44%), Gaps = 71/377 (18%)
Query: 113 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFN 171
++ P V++ A+ISG+ R L EA F +M G +Q +EYT+ ++++A F+
Sbjct: 139 SLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFS 198
Query: 172 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 231
G Q+H ++++ S + V+N+L++ Y K
Sbjct: 199 LGIQIHGLIVKSGFLNS----VFVSNSLMSLYDK-------------------------- 228
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCD 290
+ ++ +F E+P+R++ +W ++S L + G ++ LF +M + EG
Sbjct: 229 ---DSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS 285
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK------------- 337
+ + + +C L G+++H + I++G LS NALI Y+K
Sbjct: 286 FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEM 345
Query: 338 ------------------CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLY 379
G+V A +F + +++++NA++A ++G G++A++L+
Sbjct: 346 MMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLF 405
Query: 380 EQMLKEDILPDRITFLTILSACSHAGLVKEGQ--HYFDSMCTHYGMTPGEDHYARLIDLL 437
ML+ + +T ++ SA GLV E + C +G L+D+
Sbjct: 406 TDMLQRGV---ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMC 462
Query: 438 CRAGKFSEAKKVTESMP 454
R + ++A+++ + P
Sbjct: 463 TRCERMADAEEMFDQWP 479
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F++ ++E +E + ++ ++ + +H+ ++L + + GNALI+ Y K
Sbjct: 68 FDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKT-RLGNALISTYLK 126
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL-PDRITFLT 396
G A +VF+++ VS+ A+I+ ++ ++A++++ +M K ++ P+ TF+
Sbjct: 127 LGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVA 186
Query: 397 ILSAC 401
IL+AC
Sbjct: 187 ILTAC 191
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 197/671 (29%), Positives = 315/671 (46%), Gaps = 97/671 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAE----EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 56
M + GF PD FS + LGA S + +E HC + + VM + S+L+
Sbjct: 222 MLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM----- 276
Query: 57 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 116
Y + +++ A ++ +GM
Sbjct: 277 -----------------------------------------YSKYGEVSYAERIFNGMIQ 295
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQ 175
VAWN MI Y R+G +AF F+KM G+Q D T +L+ AS + GR
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS---AILE-GRT 351
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
+H Y +R P H +L ALI Y +CG+L A +FD+M
Sbjct: 352 IHGYAMRRGFLP--HMVLET--ALIDMYGECGQLKSAEVIFDRMA--------------- 392
Query: 236 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
E+N+++W +I+ ++G +L+LF ++ L P A
Sbjct: 393 ----------------EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
+ A SL G++IH+ +++ + S+ N+L+ MYA CG + A F + D
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
VSWN++I A A HG G ++ L+ +M+ + P++ TF ++L+ACS +G+V EG YF+
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE 556
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
SM YG+ PG +HY ++DL+ R G FS AK+ E MPF P+A IW SLL R H +I
Sbjct: 557 SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDI 616
Query: 476 ELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEI 535
+ AAE++F++ + G Y++L NMYA G+W++V R++ LM +G+ + S +E
Sbjct: 617 TIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEA 676
Query: 536 ENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG----YIPDTKFVLHDMESEHKEHAL 591
+ HVF D H + +Y+ L+ + R +G Y+ + + + + ++
Sbjct: 677 KGKSHVFTNGDRSHVATNKIYEVLD---VVSRMVGEEDIYVHCVSRLRPETLVKSRSNSP 733
Query: 592 STHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXX 651
HS +LA +G++ G + V N R+C CH + S+
Sbjct: 734 RRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHF 793
Query: 652 XNGECSCGNYW 662
NG CSCGNYW
Sbjct: 794 SNGRCSCGNYW 804
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 192/419 (45%), Gaps = 51/419 (12%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
Q ++P+ T + G+ + + A +L D M A WN MI G+ GLY EA + +
Sbjct: 61 QVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
M G++ D +TY +I + G+++HA V++ + V N+LI+ Y
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVY----VCNSLISLYM 176
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
K G A +VF++MP RD+VSWN+++SGY+
Sbjct: 177 KLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL--------------------------- 209
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
G G SL LF +M G +P ++ A+ AC + S G++IH ++ S
Sbjct: 210 ----GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR----SR 261
Query: 325 LSAGNALI-----TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLY 379
+ G+ ++ MY+K G V YA+ +F M + V+WN MI A++GR A +
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 380 EQMLKEDIL-PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLC 438
++M +++ L PD IT + +L A + + EG+ G P LID+
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASA----ILEGRT-IHGYAMRRGFLPHMVLETALIDMYG 376
Query: 439 RAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYI 497
G+ A+ + + M E + W S++A +G ++ + L++ + D T I
Sbjct: 377 ECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 206/474 (43%), Gaps = 92/474 (19%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY--ICCASS 62
G D F++ V+ +++ I+ E +++H V+K G + V N+L+S Y + CA
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLE-EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA-- 181
Query: 63 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAW 122
A K+F+E P ++D V+W
Sbjct: 182 ---------WDAEKVFEEMP--ERD-------------------------------IVSW 199
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
N+MISGY+ G + F++M G + D ++ S + A + G+++H + +R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 242
+ ++ + +++ +++ Y+K G++ A +F+ M
Sbjct: 260 SRIETGDVMVMT---SILDMYSKYGEVSYAERIFNGMI---------------------- 294
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACG 301
+RN++ W VMI A +G ++ F +M + GL+P + A
Sbjct: 295 ---------QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA 345
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
+L G+ IH ++ G + ALI MY +CG + A+++F M + +SWN+
Sbjct: 346 IL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNS 401
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ--HYFDSMCT 419
+IAA Q+G+ A++L++++ ++PD T +IL A + + + EG+ H +
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
++ T + L+ + G +A+K + + W S++ +HG
Sbjct: 462 YWSNTIILNS---LVHMYAMCGDLEDARKCFNHILLKDVVS-WNSIIMAYAVHG 511
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 248/454 (54%), Gaps = 35/454 (7%)
Query: 110 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 169
L + M+ V+W ++I Y R G +A +TF KM + + +E T+ S+ SA +
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 170 FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNA 229
G QLH VL + S LSV+N+++ Y+ CG LV A +F M RD++SW+
Sbjct: 326 LVWGEQLHCNVLSLGLNDS----LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWST 381
Query: 230 ILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPC 289
I+ GY A GFGEE K F+ M+ G +P
Sbjct: 382 IIGGYCQA-------------------------------GFGEEGFKYFSWMRQSGTKPT 410
Query: 290 DYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFL 349
D+A A + G + ++ G+Q+H+ + G + + + ++LI MY+KCG + A M+F
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG 470
Query: 350 TMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKE 409
D VS AMI A+HG+ +AI L+E+ LK PD +TF+++L+AC+H+G +
Sbjct: 471 ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDL 530
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
G HYF+ M Y M P ++HY ++DLLCRAG+ S+A+K+ M ++ +W +LL C
Sbjct: 531 GFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 470 RIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPG 529
+ G+IE G +AAER+ EL P + L+N+Y+ G +E A VRK M+ +GV KEPG
Sbjct: 591 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
Query: 530 CSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLV 563
S I+I++ V F+ D HP+ +Y LE V
Sbjct: 651 WSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAV 684
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 192/445 (43%), Gaps = 44/445 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++++ Y R + + ++ M AV W A+I+G V G Y+E F +M
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVL-RTVVQPSEHFILSVNNALITFYTKCGKLV 210
D YT+ + A G+ +H +V+ R V L V N+L T YT+CG++
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT-----LCVANSLATMYTECGEMQ 261
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+F+ M RD+VSW +++ Y K I +EV
Sbjct: 262 DGLCLFENMSERDVVSWTSLIVAY---------KRIGQEV-------------------- 292
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
++++ F +M++ + P + +A AC L L G+Q+H V+ LG + SLS N+
Sbjct: 293 --KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
++ MY+ CG + A ++F M D +SW+ +I Q G G + + + M + P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
++LS + ++ EG ++ +G+ + LI++ + G EA +
Sbjct: 411 DFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHLGKW 509
+ + +++ G HG + I E+ ++ D T+I + H G+
Sbjct: 470 GETDRDDIVSL-TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 510 DEVARVRKLMRE----RGVKKEPGC 530
D +M+E R K+ GC
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGC 553
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 37/302 (12%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM--GIQMDEYTYTSL 160
+L +AR++ D M H V+W ++I YV +EA F M + + D + +
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 220
+ A + G LHAY ++T + S + V ++L+ Y + GK+ ++ VF +MP
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLLSSVY----VGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
R+ V+W AI++G ++A R +E F E+ L+ T
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDT--------------------- 209
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
Y +A A+KAC L + G+ IH+ VI G ++L N+L TMY +CG
Sbjct: 210 ----------YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGE 259
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ +F M D VSW ++I A + G+ V+A++ + +M + P+ TF ++ SA
Sbjct: 260 MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Query: 401 CS 402
C+
Sbjct: 320 CA 321
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 31/301 (10%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK--SEG 285
N+ L INA L A+ +F ++P ++++WT +I + +E+L LF+ M+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
+ P + +KACG ++ G+ +H+ ++ SS+ G++L+ MY + G + +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
VF MP+ ++V+W A+I L GR + + + +M + + L D TF L AC+
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 406 LVKEGQH---------YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
VK G+ + ++C + + D LC SE V+
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS------ 277
Query: 457 PSAPIWESLLAGCRIHGNIELGIQAAERLFEL----TPEQDGTYIILSNMYAHLGK--WD 510
W SL+ + I ++A E ++ P + T+ + + A L + W
Sbjct: 278 -----WTSLIVA---YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 511 E 511
E
Sbjct: 330 E 330
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 122/309 (39%), Gaps = 78/309 (25%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ P+ +F+++ A + ++ W +QLHC+V+ G+ SV N+++ Y C
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWG-EQLHCNVLSLGLNDSLSVSNSMMKMYSTCG 359
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+L SA L GM +
Sbjct: 360 ------------------------------------------NLVSASVLFQGMRCRDII 377
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+W+ +I GY + G EE F F M G + ++ SL+S S N + GRQ+HA
Sbjct: 378 SWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA 437
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
L ++ + +V ++LI Y+KCG + +A +F + D+VS A+++GY
Sbjct: 438 LCFGLEQNS----TVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGY------ 487
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
AE G +E++ LF + G P + + AC
Sbjct: 488 -------------------------AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 301 GVLGSLDNG 309
G LD G
Sbjct: 523 THSGQLDLG 531
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/590 (32%), Positives = 301/590 (51%), Gaps = 90/590 (15%)
Query: 1 MKRDGFAPDPFSFSTVLGA---MSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI 57
M + G +P+ F+ S+VL + M ++A + +H VVK G+ V N +++ Y
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLA----YGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 58 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 117
C+ V M +A +F + + K++ +WTT+I G+ L DG+
Sbjct: 158 TCS--------VTMEAACLIFRD--IKVKNDVTWTTLITGFTH---------LGDGIG-- 196
Query: 118 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 177
+++M ++ Y T + AS + G+Q+H
Sbjct: 197 --------------------GLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 178 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
A V++ Q + L V N+++ Y +CG
Sbjct: 237 ASVIKRGFQSN----LPVMNSILDLYCRCG------------------------------ 262
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
L EAK F E+ +++L+TW +IS L S E+L +F + +S+G P Y + +
Sbjct: 263 -YLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLV 320
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS- 356
AC + +L+ GQQ+H ++ + G + ++ NALI MYAKCG + + VF + VD
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEI--VDRR 378
Query: 357 --VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
VSW +M+ HG G +A++L+++M+ I PDRI F+ +LSAC HAGLV++G YF
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG- 473
+ M + YG+ P D Y ++DLL RAGK EA ++ E MPF+P W ++L C+ H
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Query: 474 NIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWI 533
N + AA ++ EL P+ GTY++LS +YA GKW + ARVRK+MR G KKE G SWI
Sbjct: 499 NGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Query: 534 EIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDME 583
+EN V F V D + P +VY L L+ E R+ GY+P+ +++D E
Sbjct: 559 LVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 40/396 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T +I Y + AR L D M VAW AMI+GY A++ F +M G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+E+T +S++ + N + G +H V++ ++ S L V+NA++ Y C
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGS----LYVDNAMMNMYATC----- 159
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+ +E A IFR++ +N +TWT +I+G G G
Sbjct: 160 -------------------------SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDG 194
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
LK++ QM E E Y A++A + S+ G+QIH+ VI+ G S+L N++
Sbjct: 195 IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSI 254
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ +Y +CG + A F M D ++WN +I+ L + +A+ ++++ + +P+
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNC 313
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
TF ++++AC++ + GQ + G + LID+ + G ++++V
Sbjct: 314 YTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFG 372
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+ + W S++ G HG G +A E LF+
Sbjct: 373 EIVDRRNLVSWTSMMIGYGSHG---YGAEAVE-LFD 404
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/486 (34%), Positives = 262/486 (53%), Gaps = 35/486 (7%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y + S R + DGM+H + A+ISG + + L+E+ F M + +
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
TY S ++A + G+Q+HA + + ++ L + +AL+ Y+KCG +
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESE----LCIESALMDMYSKCGSI---- 307
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
E+A IF E + ++ TV++ GLA++G EE
Sbjct: 308 ---------------------------EDAWTIFESTTEVDEVSMTVILVGLAQNGSEEE 340
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
+++ F +M G+E + + + SL G+Q+HS VI+ + N LI
Sbjct: 341 AIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLIN 400
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
MY+KCG + + VF MP + VSWN+MIAA A+HG G+ A++LYE+M ++ P +T
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
FL++L ACSH GL+ +G+ + M +G+ P +HY +ID+L RAG EAK +S+
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
Query: 454 PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVA 513
P +P IW++LL C HG+ E+G AAE+LF+ P+ +I+++N+Y+ GKW E A
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERA 580
Query: 514 RVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIP 573
+ K M+ GV KE G S IEIE+ H F+V+D +HP+ A+Y L L M GY P
Sbjct: 581 KTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRP 640
Query: 574 DTKFVL 579
D +F+L
Sbjct: 641 DKRFIL 646
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 154/341 (45%), Gaps = 49/341 (14%)
Query: 172 CGRQ---------LHAYVLRT--VVQPSEHFI----LSVNNALITFYTKCGKLVQAREVF 216
CGR+ LHA +++ +P + I L V N+L++ Y KCGKLV A ++F
Sbjct: 54 CGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLF 113
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D+MP+RD++S N + G++ R E + + + L GF +L
Sbjct: 114 DEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM--------------LGSGGFDHATLT 159
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
+ L CD + C V + IH+ I G+D +S GN LIT Y
Sbjct: 160 IV-------LSVCDTP-----EFCLVT------KMIHALAILSGYDKEISVGNKLITSYF 201
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
KCG VF M + + ++ A+I+ L ++ ++L+ M + + P+ +T+L+
Sbjct: 202 KCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
L+ACS + + EGQ ++ YG+ + L+D+ + G +A + ES E
Sbjct: 262 ALAACSGSQRIVEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT-E 319
Query: 457 PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYI 497
+L G +G+ E IQ R+ + E D +
Sbjct: 320 VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVV 360
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/636 (28%), Positives = 313/636 (49%), Gaps = 113/636 (17%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
+ D PD + STVL A S++ E +Q+H ++++G+ S++N L
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLE-GGKQIHAHILRYGLEMDASLMNVL-------- 290
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
I YV+ + +A KL +GM + +
Sbjct: 291 ----------------------------------IDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+W ++SGY ++ L++EA + F M G++ D Y +S++++ + G Q+HAY
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 181 LRTVVQPSEHFILSV---------------------------NNALITFYTKCG---KLV 210
++ + + S+ NA+I Y++ G +L
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 211 QAREVFDKMPVR---------------------------------------DLVSWNAIL 231
+A +F M R D+ + +A++
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
Y N L++++ +F E+ ++L+ W M +G + EE+L LF +++ P ++
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
+A + A G L S+ GQ+ H Q+++ G + + NAL+ MYAKCG A F +
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
D V WN++I++ A HG G +A+Q+ E+M+ E I P+ ITF+ +LSACSHAGLV++G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGL 676
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
F+ M +G+ P +HY ++ LL RAG+ ++A+++ E MP +P+A +W SLL+GC
Sbjct: 677 KQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 472 HGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
GN+EL AAE P+ G++ +LSN+YA G W E +VR+ M+ GV KEPG S
Sbjct: 736 AGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
Query: 532 WIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR 567
WI I VH+FL D H + + +Y+ L+ L++++R
Sbjct: 796 WIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 180/385 (46%), Gaps = 50/385 (12%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T +I Y+++ ++ AR + D + V W MISG V+ G + F ++ +
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D Y ++++SA G+Q+HA++LR ++ S+ N LI Y KCG+++
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA----SLMNVLIDSYVKCGRVIA 302
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A + +F +P +N+++WT ++SG ++
Sbjct: 303 AHK-------------------------------LFNGMPNKNIISWTTLLSGYKQNALH 331
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ--LGHDSSLSAGN 329
+E+++LF M GL+P YA + + +C L +L G Q+H+ I+ LG+DS ++ N
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT--N 389
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV---QAIQLYEQMLKED 386
+LI MYAKC + A VF D V +NAMI ++ G +A+ ++ M
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 387 ILPDRITFLTILSAC---SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
I P +TF+++L A + GL K+ + YG+ + LID+
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQ----IHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 444 SEAKKVTESMPFEPSAPIWESLLAG 468
+++ V + M + IW S+ AG
Sbjct: 506 KDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 169/361 (46%), Gaps = 43/361 (11%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQM 152
+I Y R + ARK+ + M V+W+ M+S HG+YEE+ F + +
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 153 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 212
+EY +S I A +GL GR + V Q L +F K G
Sbjct: 145 NEYILSSFIQAC--SGLDGRGRWM-------VFQ------------LQSFLVKSG----- 178
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
FD RD+ ++ Y+ ++ A+ +F +PE++ +TWT MISG + G
Sbjct: 179 ---FD----RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSY 231
Query: 273 ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
SL+LF Q+ + + P Y + + AC +L L+ G+QIH+ +++ G + S N LI
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
Y KCG V A +F MP + +SW +++ Q+ +A++L+ M K + PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP--GEDHYA--RLIDLLCRAGKFSEAKK 448
+IL++C A L G F + Y + G D Y LID+ + ++A+K
Sbjct: 352 ACSSILTSC--ASLHALG---FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 449 V 449
V
Sbjct: 407 V 407
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 195 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 254
++N LI Y++ G +V AR+VF+KM PERN
Sbjct: 81 LSNILINLYSRAGGMVYARKVFEKM-------------------------------PERN 109
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQ--Q 311
L++W+ M+S G EESL +F + ++ P +Y + I+AC L Q
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ 169
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+ S +++ G D + G LI Y K G + YA +VF +P +V+W MI+ + GR
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
++QL+ Q+++++++PD T+LSACS + EG + YG+
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL-EGGKQIHAHILRYGLEMDASLMN 288
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
LID + G+ A K+ MP + W +LL+G
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+H Q+I G + N LI +Y++ G + YA VF MP + VSW+ M++A HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 372 GVQAIQLYEQMLK-EDILPDRITFLTILSACSHAGLVKEGQ---HYFDSMCTHYGMTPGE 427
+++ ++ + + P+ + + ACS GL G+ S G
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
LID + G A+ V +++P E S W ++++GC G + +Q +L E
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 488 LTPEQDGTYII 498
DG YI+
Sbjct: 243 DNVVPDG-YIL 252
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 288/586 (49%), Gaps = 86/586 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+R+G P +F +L A+ + + Q H +VK+G+ P V N+L+S Y
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRDSNPF--QFHAHIVKFGLDSDPFVRNSLISGY---- 148
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S+ LFD A +L DG V
Sbjct: 149 ------------SSSGLFD--------------------------FASRLFDGAEDKDVV 170
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
W AMI G+VR+G EA F +M G+ +E T S++ A+ GR +H
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
L T + FI ++L+ Y KC A++VFD+MP R++V+W A+++GY+ +R
Sbjct: 231 LETGRVKCDVFI---GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
++ +F E+ +KS+ + P + + + AC
Sbjct: 288 DKGMLVFEEM------------------------------LKSD-VAPNEKTLSSVLSAC 316
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
+G+L G+++H +I+ + + +AG LI +Y KCG + A +VF + + +W
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWT 376
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
AMI A HG A L+ ML + P+ +TF+ +LSAC+H GLV+EG+ F SM
Sbjct: 377 AMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
+ M P DHYA ++DL R G EAK + E MP EP+ +W +L C +H + ELG
Sbjct: 437 FNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKY 496
Query: 481 AAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVH 540
AA R+ +L P G Y +L+N+Y+ WDEVARVRK M+++ V K PG SWIE++ +
Sbjct: 497 AASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLC 556
Query: 541 VFLVDDAVHP-EVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESE 585
F+ D P E +YK L+ + ++MR +PD L D+ +E
Sbjct: 557 EFIAFDDKKPLESDDLYKTLDTVGVQMR----LPDE---LEDVTAE 595
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 49/374 (13%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGL---YEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
AR+LL + W+++I G+ G+ +F +R M G+ +T+ L+ A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
F N Q HA++++ + S+ F V N+LI+ Y+ G A +FD +D
Sbjct: 114 VFKLRDSN-PFQFHAHIVKFGLD-SDPF---VRNSLISGYSSSGLFDFASRLFDGAEDKD 168
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+V+W A MI G +G E++ F +MK
Sbjct: 169 VVTWTA-------------------------------MIDGFVRNGSASEAMVYFVEMKK 197
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALITMYAKCGVVG 342
G+ + +KA G + + G+ +H ++ G + G++L+ MY KC
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
A VF MP + V+W A+IA Q + + ++E+MLK D+ P+ T ++LSAC+
Sbjct: 258 DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACA 317
Query: 403 HAGLVKEGQH---YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSA 459
H G + G+ Y T G LIDL + G EA V E + E +
Sbjct: 318 HVGALHRGRRVHCYMIKNSIEINTTAG----TTLIDLYVKCGCLEEAILVFERL-HEKNV 372
Query: 460 PIWESLLAGCRIHG 473
W +++ G HG
Sbjct: 373 YTWTAMINGFAAHG 386
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
S + M+ G+ P + + +KA L N Q H+ +++ G DS N+LI+
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLIS 146
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
Y+ G+ +A +F D V+W AMI ++G +A+ + +M K + + +T
Sbjct: 147 GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 394 FLTILSACSHAGLVKEGQH----YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
+++L A V+ G+ Y ++ + G + L+D+ + + +A+KV
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG----SSLVDMYGKCSCYDDAQKV 262
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF--ELTPEQDGTYIILSNMYAHLG 507
+ MP + W +L+AG + G+ E + ++ P + +LS AH+G
Sbjct: 263 FDEMP-SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC-AHVG 320
Query: 508 KWDEVARVRKLMRERGVK 525
RV M + ++
Sbjct: 321 ALHRGRRVHCYMIKNSIE 338
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 260/480 (54%), Gaps = 5/480 (1%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQM 152
MI Y + D++ SARK+ D M+ V+WN+MISGY + G +E+ ++ M + +
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKP 232
Query: 153 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 212
+ T S+ A + G ++H ++ +Q LS+ NA+I FY KCG L A
Sbjct: 233 NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD----LSLCNAVIGFYAKCGSLDYA 288
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
R +FD+M +D V++ AI+SGY+ ++EA +F E+ L TW MISGL ++ E
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
Query: 273 ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
E + F +M G P + + + +L G++IH+ I+ G D+++ ++I
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
YAK G + A VF ++W A+I A A HG A L++QM PD +
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
T +LSA +H+G QH FDSM T Y + PG +HYA ++ +L RAGK S+A +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 453 MPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEV 512
MP +P A +W +LL G + G++E+ A +RLFE+ PE G Y I++N+Y G+W+E
Sbjct: 529 MPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEA 588
Query: 513 ARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYI 572
VR M+ G+KK PG SWIE E + F+ D+ +Y+ +E LV M YI
Sbjct: 589 EMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 202/485 (41%), Gaps = 90/485 (18%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK------M 145
+ +I+ Y R D A + D +T A ++NA++ Y +Y +AF F
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCG---RQLHAYVLRTVVQPSEHFILSVNNALITF 202
S + D + + ++ A F G RQ+H +V+R + V N +IT+
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSD----VFVGNGMITY 176
Query: 203 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 262
YTKC + AR+VFD+M RD+VSWN+++SGY + E+ K +++ +
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM------------ 224
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
LA S F +P +ACG L G ++H ++I+
Sbjct: 225 --LACSDF----------------KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQ 266
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV------------------------- 357
LS NA+I YAKCG + YA +F M DSV
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 358 ------SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
+WNAMI+ L Q+ + I + +M++ P+ +T ++L + +++ +K G+
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 412 --HYF----DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESL 465
H F + Y T D+YA+L LL F K + S W ++
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK--------DRSLIAWTAI 438
Query: 466 LAGCRIHGNIELGIQAAERLFEL-TPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
+ +HG+ + +++ L T D T + + +AH G D + M +
Sbjct: 439 ITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK-Y 497
Query: 525 KKEPG 529
EPG
Sbjct: 498 DIEPG 502
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 142/290 (48%), Gaps = 20/290 (6%)
Query: 32 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 91
++H +++ + S+ N ++ Y C S + AR LFDE +S+KD ++
Sbjct: 255 EVHKKMIENHIQMDLSLCNAVIGFYAKCGS---------LDYARALFDE--MSEKDSVTY 303
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I+GY+ + + A L M WNAMISG +++ +EE ++FR+M G +
Sbjct: 304 GAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR 363
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ T +SL+ + + G+++HA+ +R + + V ++I Y K G L+
Sbjct: 364 PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN----IYVTTSIIDNYAKLGFLLG 419
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV----PERNLLTWTVMISGLAE 267
A+ VFD R L++W AI++ Y + A +F ++ + + +T T ++S A
Sbjct: 420 AQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAH 479
Query: 268 SGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
SG + + +F+ M ++ +EP YA + G L + + S++
Sbjct: 480 SGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 313/617 (50%), Gaps = 60/617 (9%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
MK G+ D F+F+++L + + E Q H ++K + V N L+ Y C
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ + AR++F+ + +D +W T+I YV++++ + A L M V
Sbjct: 478 A---------LEDARQIFER--MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 121 AWNAMISGYVR-----HGLYEEAFDTFRKMHSM----GIQMDEYTYTSLISASFNTGLFN 171
+ A ++ ++ HGLY+ +++H + G+ D +T +SLI G+
Sbjct: 527 SDGACLASTLKACTHVHGLYQG-----KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 172 CGRQLHAYV--------------------LRTVVQPSEHFILSVNNALITFYT---KCGK 208
R++ + + VV E VN + ITF T C K
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Query: 209 ---LVQAREVFDKMPVRDLVSWN-----AILSGYINARRLEEAKFIFREVPE-RNLLTWT 259
L + ++ R S ++L Y+N+R + EA +F E+ ++++ WT
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
M+SG +++GF EE+LK + +M+ +G+ P + ++ C VL SL G+ IHS + L
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV-SWNAMIAALAQHGRGVQAIQL 378
HD N LI MYAKCG + + VF M +V SWN++I A++G A+++
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKI 821
Query: 379 YEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLC 438
++ M + I+PD ITFL +L+ACSHAG V +G+ F+ M YG+ DH A ++DLL
Sbjct: 822 FDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLG 881
Query: 439 RAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYII 498
R G EA E+ +P A +W SLL CRIHG+ G +AE+L EL P+ Y++
Sbjct: 882 RWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVL 941
Query: 499 LSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKY 558
LSN+YA G W++ +RK+MR+RGVKK PG SWI++E H+F D H E+ + +
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMF 1001
Query: 559 LEQLVIEMRKLGYI-PD 574
LE L M+ + PD
Sbjct: 1002 LEDLYDLMKDDAVVNPD 1018
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 215/491 (43%), Gaps = 74/491 (15%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGV----MCVPSVLNTLLSC-------- 55
P+ F+FS VL + E+ +Q+HC ++K G+ C ++++ C
Sbjct: 158 PNKFTFSIVLSTCARETNVEFG-RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 56 ------------YICCAS----STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYV 99
+ C S + L E VL+ ++ DE + D ++ T+I Y+
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF--ERMRDEG--HRPDHLAFVTVINTYI 272
Query: 100 RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 159
R L AR L M+ P VAWN MISG+ + G A + F M ++ T S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 219
++SA + G +HA ++ + + + V ++L++ Y+KC K+
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASN----IYVGSSLVSMYSKCEKM---------- 378
Query: 220 PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFN 279
E A +F + E+N + W MI G A +G + ++LF
Sbjct: 379 ---------------------EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 280 QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG 339
MKS G D+ + + C L+ G Q HS +I+ +L GNAL+ MYAKCG
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 340 VVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
+ A +F M D+V+WN +I + Q +A L+++M I+ D + L
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 400 ACSHAGLVKEGQ--HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
AC+H + +G+ H C G+ + LID+ + G +A+KV S+P E
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKC---GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EW 593
Query: 458 SAPIWESLLAG 468
S +L+AG
Sbjct: 594 SVVSMNALIAG 604
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 178/391 (45%), Gaps = 41/391 (10%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + ++ A K D + + AWN+M+S Y G + +F + I +++T+
Sbjct: 105 YAKCAQVSYAEKQFDFLEKDV-TAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTF 163
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+ ++S GRQ+H +++ ++ + + AL+ Y KC ++ AR VF+
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSY----CGGALVDMYAKCDRISDARRVFE 219
Query: 218 KMPVRDLVSWNAILSGYINA-----------------------------------RRLEE 242
+ + V W + SGY+ A +L++
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
A+ +F E+ +++ W VMISG + G +++ F M+ ++ + A G+
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
+ +LD G +H++ I+LG S++ G++L++MY+KC + A VF + + V WNAM
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
I A +G + ++L+ M D TF ++LS C+ + ++ G F S+
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKK 458
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
+ L+D+ + G +A+++ E M
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 126/271 (46%), Gaps = 31/271 (11%)
Query: 171 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW--- 227
+ GR+++ +VL PS ++ L+ KL ++R+VFD+MP R ++
Sbjct: 28 DLGRRIYGHVL-----PSHD---QIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIG 79
Query: 228 -------------------NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
NAI+ Y ++ A+ F + E+++ W M+S +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSI 138
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
G + L+ F + + P + ++ + C +++ G+QIH +I++G + + G
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
AL+ MYAKC + A VF + ++V W + + + G +A+ ++E+M E
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
PD + F+T+++ G +K+ + F M +
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 281/568 (49%), Gaps = 46/568 (8%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
DL+ A ++ + P+ WNA+I G+ AF +R M ++
Sbjct: 52 DLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF----YTKCGKLVQAREVFDK 218
SF L C R L + + + LS ++ L T Y+K G L+ A ++FD+
Sbjct: 112 CSFT--LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 219 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLF 278
MPV R++ +W +I+GL E+++L+
Sbjct: 170 MPV-------------------------------RDVASWNALIAGLVSGNRASEAMELY 198
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKC 338
+M++EG+ + A+ AC LG + G+ I + ++ NA I MY+KC
Sbjct: 199 KRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGY----SNDNVIVSNAAIDMYSKC 254
Query: 339 GVVGYADMVFLTMPYVDSV-SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
G V A VF SV +WN MI A HG +A+++++++ I PD +++L
Sbjct: 255 GFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAA 314
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
L+AC HAGLV+ G F++M G+ HY ++DLL RAG+ EA + SM P
Sbjct: 315 LTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP 373
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
+W+SLL I+ ++E+ A+ + E+ DG +++LSN+YA G+W +V RVR
Sbjct: 374 DPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRD 433
Query: 518 LMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKF 577
M + VKK PG S+IE + +H F D H + +Y+ ++++ ++R+ GY+ T
Sbjct: 434 DMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGL 493
Query: 578 VLHDMESEHKEHALSTHSEKLAVVYGILKLPLG---ATIRVFKNLRMCGDCHNAFKFISK 634
VLHD+ E KE+AL HSEKLAV YG++ + + +RV NLR+CGDCH FK ISK
Sbjct: 494 VLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISK 553
Query: 635 XXXXXXXXXXXXXXXXXXNGECSCGNYW 662
+G CSC ++W
Sbjct: 554 IYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 43/277 (15%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
TT++ Y +N DL SA KL D M +WNA+I+G V EA + +++M + GI+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 152 MDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
E T + + A + G G + H Y V+ V+NA I Y+KCG +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI---------VSNAAIDMYSKCGFVD 258
Query: 211 QAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
+A +VF++ + +V+WN MI+G A G
Sbjct: 259 KAYQVFEQFTGKKSVVTWN-------------------------------TMITGFAVHG 287
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
+L++F++++ G++P D +Y A+ AC G ++ G + + + G + ++
Sbjct: 288 EAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYG 347
Query: 330 ALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAA 365
++ + ++ G + A + +M + D V W +++ A
Sbjct: 348 CVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 284/571 (49%), Gaps = 90/571 (15%)
Query: 36 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 95
DVV W NT++S Y+ C +E ARKLFDE P +D SW TMI
Sbjct: 101 DVVTW---------NTMISGYVSCGGIRFLEE------ARKLFDEMP--SRDSFSWNTMI 143
Query: 96 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-------- 147
+GY +N + A L + M AV+W+AMI+G+ ++G + A FRKM
Sbjct: 144 SGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCA 203
Query: 148 --MGIQMDEY---------TYTSLISA------SFNTGLFNCGRQLHAYVLRTVVQP--- 187
G+ +E Y SL+S ++NT + G++ R +
Sbjct: 204 LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Query: 188 ----------SEHFILSVN--NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
E F +V N++I Y K G +V AR +FD+M RD +SWN ++ GY+
Sbjct: 264 LCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYV 323
Query: 236 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE----------------------- 272
+ R+E+A +F E+P R+ +W +M+SG A G E
Sbjct: 324 HVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAA 383
Query: 273 --------ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
E++ LF +M EG +P + + A L +L G Q+H Q++
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPD 442
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQML 383
+ NALITMY++CG + + +F M + ++WNAMI A HG +A+ L+ M
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
I P ITF+++L+AC+HAGLV E + F SM + Y + P +HY+ L+++ G+F
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF 562
Query: 444 SEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMY 503
EA + SMPFEP +W +LL CRI+ N+ L AAE + L PE Y++L NMY
Sbjct: 563 EEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMY 622
Query: 504 AHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
A +G WDE ++VR M + +KKE G SW++
Sbjct: 623 ADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 206/479 (43%), Gaps = 82/479 (17%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
+A AR +F++ L ++ +W TMI+GYV+ ++ ARKL D M V WN MISGYV
Sbjct: 56 IAEARDIFEK--LEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 131 RHG---LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
G EEA F +M S D +++ ++IS
Sbjct: 114 SCGGIRFLEEARKLFDEMPS----RDSFSWNTMISG------------------------ 145
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 247
Y K ++ +A +F+KMP R+ VSW+A+++G+ ++ A +F
Sbjct: 146 ---------------YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLF 190
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS--EGLEPCDYAYAGAIKACGVLGS 305
R++P ++ +++GL ++ E+ + Q S G E YAY I G G
Sbjct: 191 RKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 306 LDNGQQIHSQVIQLGHD-----------SSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
++ + + Q+ L D ++ + N++I Y K G V A ++F M
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
D++SWN MI R A L+ +M D ++ ++S + G V+ +HYF
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGYASVGNVELARHYF 366
Query: 415 DSMCTHYGMTPGEDH---YARLIDLLCRAGKFSEAKKVTESMPFEPSAP---IWESLLAG 468
+ TP E H + +I + + EA + M E P SLL+
Sbjct: 367 EK-------TP-EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Query: 469 CRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
N+ LG+Q + + + + L MY+ G E+ R++ E +K+E
Sbjct: 419 STGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCG---EIMESRRIFDEMKLKRE 474
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 302/595 (50%), Gaps = 28/595 (4%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M++ G D + +L A + C+ H V++ G+ V+N LL
Sbjct: 149 MRQRGLTGDGYILPLILRACRYLGRFGL-CRAFHTQVIQIGLKENLHVVNELL------- 200
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH---- 116
TL M A LF E P+ ++ SW MI G+ + D SA K+ + M
Sbjct: 201 --TLYPKAGRMGDAYNLFVEMPV--RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P V W +++S + + G +E+ F M G + S + ++
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H YV++ + L NALI Y K GK+ A +F ++ + + SWN++++ +++
Sbjct: 317 HGYVIKGGFEE----YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 237 ARRLEEAKFIFREVPE--------RNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
A +L+EA +F E+ E N++TWT +I G G G++SL+ F QM+ +
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
+ C L +L+ G++IH VI+ ++ NAL+ MYAKCG++ +VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
+ D +SWN++I HG +A+ ++++M+ PD I + +LSACSHAGLV+
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+G+ F SM +G+ P ++HYA ++DLL R G EA ++ ++MP EP + +LL
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Query: 469 CRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEP 528
CR+H N+++ A +L L PE+ G+Y++LSN+Y+ G+W+E A VR L +++ +KK
Sbjct: 613 CRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVS 672
Query: 529 GCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDME 583
G SWIE++ + F V E +Y LE LV M K G D D++
Sbjct: 673 GSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLD 727
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 196/453 (43%), Gaps = 52/453 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAV---AWNAMISGYVRHGLYEEAFDTFRKMHSM 148
+I+ Y R L AR + + ++ + WN+++ V HGLYE A + +R M
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
G+ D Y ++ A G F R H V++ ++ + H + N L+T Y K G+
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVV----NELLTLYPKAGR 208
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISG 264
+ A +F +MPVR+ +SWN ++ G+ E A IF RE + + +TWT ++S
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
++ G E+ LK F+ M+ G A A C L +L +++H VI+ G +
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 325 LSAGNALITMYAKCGVVGYADMVF-------------LTMPYVDS--------------- 356
L + NALI +Y K G V A+ +F L +VD+
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 357 -----------VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
V+W ++I GRG +++ + QM +L + +T ILS C+
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 406 LVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESL 465
+ G+ M+ L+++ + G SE V E++ + W S+
Sbjct: 449 ALNLGRE-IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSI 506
Query: 466 LAGCRIHGNIELGIQAAERLFELTPEQDGTYII 498
+ G +HG E + +R+ DG ++
Sbjct: 507 IKGYGMHGFAEKALSMFDRMISSGFHPDGIALV 539
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 43/260 (16%)
Query: 174 RQLHAYVLRTVVQPSEHFIL---SVNNALITFYTKCGKLVQAREVFDKMPV---RDLVSW 227
RQ+HA VL + FI S+ LI+ Y + G L+ AR VF+ + + DL W
Sbjct: 73 RQVHAQVLLS------DFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLW 126
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N+IL ++ G E +L+L+ M+ GL
Sbjct: 127 NSILKANVS-------------------------------HGLYENALELYRGMRQRGLT 155
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
Y ++AC LG + H+QVIQ+G +L N L+T+Y K G +G A +
Sbjct: 156 GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNL 215
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F+ MP + +SWN MI +Q A++++E M +E+ PD +T+ ++LS S G
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 408 KEGQHYFDSMCTHYGMTPGE 427
++ YF M GE
Sbjct: 276 EDVLKYFHLMRMSGNAVSGE 295
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 265/523 (50%), Gaps = 70/523 (13%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
A ++ + + P N++I + ++ +AF F +M G+ D +TY L+ A
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG------------------- 207
+ +H ++ + + + V NALI Y++CG
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSD----IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDT 185
Query: 208 --------------KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
+L AR +FD+MP RDL+SWN +L GY R + +A +F ++PER
Sbjct: 186 VSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER 245
Query: 254 N---------------------------------LLTWTVMISGLAESGFGEESLKLFNQ 280
N ++TWT++I+G AE G +E+ +L +Q
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
M + GL+ A + AC G L G +IHS + + S+ NAL+ MYAKCG
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ A VF +P D VSWN M+ L HG G +AI+L+ +M +E I PD++TF+ +L +
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
C+HAGL+ EG YF SM Y + P +HY L+DLL R G+ EA KV ++MP EP+
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
IW +LL CR+H +++ + + L +L P G Y +LSN+YA W+ VA +R M+
Sbjct: 486 IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545
Query: 521 ERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLV 563
GV+K G S +E+E+ +H F V D HP+ +Y+ L L+
Sbjct: 546 SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLI 588
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 186/456 (40%), Gaps = 119/456 (26%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWH--CQQLHCDVVKWGVMCVPSVLNTLLSCYIC 58
M+R G D F++ +L A S + W + +H + K G+ V N L+ CY
Sbjct: 108 MQRFGLFADNFTYPFLLKACS---GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSR 164
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
C + + A KLF++ +S++D SW +M+ G V+ +L AR+L D M
Sbjct: 165 CGGLGVRD-------AMKLFEK--MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHS----------MG-----------IQMDE--- 154
++WN M+ GY R +AF+ F KM MG + D+
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 155 -----YTYTSLISASFNTGLFNCGRQL------------HAYVLRTVVQPSEHFILSVN- 196
T+T +I+ GL +L A V+ + +E +LS+
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 197 ------------------NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
NAL+ Y KCG L +A +VF+ +P +DLVSWN
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN---------- 385
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
M+ GL G G+E+++LF++M+ EG+ P + +
Sbjct: 386 ---------------------TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC 424
Query: 299 ACGVLGSLDNG-------QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
+C G +D G ++++ V Q+ H L+ + + G + A V TM
Sbjct: 425 SCNHAGLIDEGIDYFYSMEKVYDLVPQVEH------YGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 352 PY-VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
P + V W A++ A H A ++ + ++K D
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 177/412 (42%), Gaps = 66/412 (16%)
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINA----RRLEEAKFIFREVPERNLLTWTV 260
KC L Q +++ ++ R+L I I+A R+ A +F +V E N+
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNS 87
Query: 261 MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
+I A++ ++ +F++M+ GL ++ Y +KAC L + +H+ + +LG
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 321 HDSSLSAGNALITMYAKCGVVGYADM--VFLTMPYVDSVSWNAMIAALAQHGRGVQAIQL 378
S + NALI Y++CG +G D +F M D+VSWN+M+ L + G A +L
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 379 YEQMLKEDI-------------------------LPDR--ITFLTILSACSHAGLVKEGQ 411
+++M + D+ +P+R +++ T++ S AG ++ +
Sbjct: 208 FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMAR 267
Query: 412 HYFDSMCTHYGMTPGED--HYARLIDLLCRAGKFSEAKKVTESM-----PFEPSAPIWES 464
FD M P ++ + +I G EA ++ + M F+ +A I S
Sbjct: 268 VMFDKMP-----LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI--S 320
Query: 465 LLAGCRIHGNIELGIQAAERLFELTPEQDGTYII--LSNMYAHLGKWDEVARVRKLMRER 522
+LA C G + LG++ + + + Y++ L +MYA G + V
Sbjct: 321 ILAACTESGLLSLGMR-IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN----- 374
Query: 523 GVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPD 574
+ K+ SW M+H VH K +L MR+ G PD
Sbjct: 375 DIPKKDLVSW---NTMLHGL--------GVHGHGKEAIELFSRMRREGIRPD 415
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 266/482 (55%), Gaps = 20/482 (4%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + LA A ++ D M AV+WNA+I+ + ++G E F M I+ DE+T+
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
S++ A G G ++H+ ++++ + + SV +LI Y+KCG + +A ++
Sbjct: 487 GSILKAC-TGGSLGYGMEIHSSIVKSGMASNS----SVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+ R VS ++ +RL+E ++W +ISG E++ L
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEM-----------CVSWNSIISGYVMKEQSEDAQML 590
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F +M G+ P + YA + C L S G+QIH+QVI+ S + + L+ MY+K
Sbjct: 591 FTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSK 650
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG + + ++F D V+WNAMI A HG+G +AIQL+E+M+ E+I P+ +TF++I
Sbjct: 651 CGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
L AC+H GL+ +G YF M YG+ P HY+ ++D+L ++GK A ++ MPFE
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 458 SAPIWESLLAGCRIH-GNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVR 516
IW +LL C IH N+E+ +A L L P+ Y +LSN+YA G W++V+ +R
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830
Query: 517 KLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTK 576
+ MR +KKEPGCSW+E+++ +HVFLV D HP +Y+ L + EM+ D+
Sbjct: 831 RNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF---DDSS 887
Query: 577 FV 578
FV
Sbjct: 888 FV 889
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 200/451 (44%), Gaps = 79/451 (17%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR--HGLYEEAFDTFRKMHSMG 149
T + Y + D++ A+ L D + ++NAMI+GY + HG +A F ++ S G
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGF--KALLLFHRLMSSG 377
Query: 150 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
+ DE + + + A + G Q++ +++ S + V NA I Y KC L
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS----SLSLDVCVANAAIDMYGKCQAL 433
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
+A VFD+M RD VSWNAI++ + ++G
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAH-------------------------------EQNG 462
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
G E+L LF M +EP ++ + +KAC GSL G +IHS +++ G S+ S G
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 330 ALITMYAKCGVVGYADMV---FLTMPYVDS-----------------VSWNAMIAALAQH 369
+LI MY+KCG++ A+ + F V VSWN++I+
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSH---AGLVKEGQHYFDSMCTHYGMTPG 426
+ A L+ +M++ I PD+ T+ T+L C++ AGL K+ H +
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ---------IHAQVIKK 632
Query: 427 E---DHY--ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
E D Y + L+D+ + G +++ + E W +++ G HG E IQ
Sbjct: 633 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 482 AERL-FELTPEQDGTYIILSNMYAHLGKWDE 511
ER+ E T+I + AH+G D+
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDK 722
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 134/235 (57%), Gaps = 4/235 (1%)
Query: 168 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 227
G G+Q HA+++ + +P+ F+L N L+ YT V A VFDKMP+RD+VSW
Sbjct: 62 GALELGKQAHAHMIISGFRPTT-FVL---NCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N +++GY + + +A F +P R++++W M+SG ++G +S+++F M EG+E
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
+A +K C L G QIH V+++G D+ + A +AL+ MYAK + V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
F +P +SVSW+A+IA Q+ A++ +++M K + + + ++L +C+
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 37/363 (10%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D + + ++ Y + + ++ G+ +V+W+A+I+G V++ L A F++M
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
+ + + Y S++ + G QLHA+ L++ V A + Y KC
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG----IVRTATLDMYAKC 329
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
+ A+ +FD + S+NA MI+G +
Sbjct: 330 DNMQDAQILFDNSENLNRQSYNA-------------------------------MITGYS 358
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
+ G ++L LF+++ S GL + + +G +AC ++ L G QI+ I+ +
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
NA I MY KC + A VF M D+VSWNA+IAA Q+G+G + + L+ ML+
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
I PD TF +IL AC+ G + G S+ GM LID+ + G EA
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 447 KKV 449
+K+
Sbjct: 537 EKI 539
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 195/444 (43%), Gaps = 50/444 (11%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS 90
+Q H ++ G VLN LL Y SA +FD+ PL +D S
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRD---------FVSASMVFDKMPL--RDVVS 116
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 150
W MI GY +++D+ A + M V+WN+M+SGY+++G ++ + F M GI
Sbjct: 117 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ D T+ ++ + G Q+H V+R + +AL+ Y K + V
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD----VVAASALLDMYAKGKRFV 232
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
++ VF +P ++ VSW+AI++G + + NLL+
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCV----------------QNNLLSL------------ 264
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+LK F +M+ YA +++C L L G Q+H+ ++ + A
Sbjct: 265 ---ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTA 321
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
+ MYAKC + A ++F ++ S+NAMI +Q G +A+ L+ +++ + D
Sbjct: 322 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 381
Query: 391 RITFLTILSACSHAGLVKEG-QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
I+ + AC+ + EG Q Y ++ + + + A ID+ + +EA +V
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRV 439
Query: 450 TESMPFEPSAPIWESLLAGCRIHG 473
+ M A W +++A +G
Sbjct: 440 FDEMR-RRDAVSWNAIIAAHEQNG 462
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
G PD F+++TVL + +A +Q+H V+K + YIC
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLG-KQIHAQVIKKELQS---------DVYIC------ 641
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 124
+T++ Y + DL +R + + V WNA
Sbjct: 642 ---------------------------STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 674
Query: 125 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 184
MI GY HG EEA F +M I+ + T+ S++ A + GL + G + + R
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 734
Query: 185 -VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGYI----NAR 238
+ P L + ++ K GK+ +A E+ +MP D V W +L N
Sbjct: 735 GLDPQ----LPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVE 790
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
EEA + ++ +T++ + A++G E+ L M+
Sbjct: 791 VAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMR 834
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/516 (31%), Positives = 275/516 (53%), Gaps = 36/516 (6%)
Query: 83 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 142
++ K+ S ++M+ GY + + AR L D MT + W AMI GY + G +E+ F F
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 143 RKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 201
+M G ++++ T + A + + G Q+H V R ++ F L + N+L++
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLE----FDLFLGNSLMS 318
Query: 202 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP---------- 251
Y+K G + +A+ VF M +D VSWN++++G + +++ EA +F ++P
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 252 ---------------------ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCD 290
E++ +TWT MIS +G+ EE+L F++M + + P
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
Y ++ + A L L G QIH +V+++ + LS N+L++MY KCG A +F
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC 498
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
+ + VS+N MI+ + +G G +A++L+ + P+ +TFL +LSAC H G V G
Sbjct: 499 ISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG 558
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCR 470
YF SM + Y + PG DHYA ++DLL R+G +A + +MP +P + +W SLL+ +
Sbjct: 559 WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASK 618
Query: 471 IHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGC 530
H ++L AA++L EL P+ Y++LS +Y+ +GK + R+ + + + +KK+PG
Sbjct: 619 THLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGS 678
Query: 531 SWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEM 566
SWI ++ VH FL D + + L+ + EM
Sbjct: 679 SWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 219/451 (48%), Gaps = 31/451 (6%)
Query: 83 LSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL-YEEAFDT 141
+S + SW MI+ Y N ++ A ++ D M + ++NAMI+ +++ +A++
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYEL 135
Query: 142 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 201
F + + + +Y ++I+ G F+ L+A P + +N L++
Sbjct: 136 FCDIP----EKNAVSYATMITGFVRAGRFDEAEFLYAET------PVKFRDSVASNVLLS 185
Query: 202 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 261
Y + GK +A VF M V+++VS ++++ GY R+ +A+ +F + ERN++TWT M
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 262 ISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
I G ++GF E+ LF +M+ EG ++ A KAC G QIH V ++
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP 305
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
+ L GN+L++MY+K G +G A VF M DSVSWN++I L Q + +A +L+E
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFE 365
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH-YGMTPGEDH--YARLIDLL 437
+M +D+ +++ ++ S G + S C +GM P +D+ + +I
Sbjct: 366 KMPGKDM----VSWTDMIKGFSGKGEI--------SKCVELFGMMPEKDNITWTAMISAF 413
Query: 438 CRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD- 493
G + EA M + P++ + S+L+ ++ G+Q R+ ++ D
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 494 GTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
L +MY G ++ ++ + E +
Sbjct: 474 SVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 197 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
N+ I+ + + G L +A +F +M R +VSW A++S Y ++ +A +F E+P R
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 257 TWTVMISGLAESGFG-EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
++ MI+ + ++ ++ +LF + E +YA I G D + ++++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
DS A N L++ Y + G A VF M + VS ++M+ + GR V A
Sbjct: 170 TPVKFRDS--VASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
L+++M + ++ IT+ ++ AG ++G F M
Sbjct: 228 RSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRM 265
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/493 (32%), Positives = 279/493 (56%), Gaps = 13/493 (2%)
Query: 75 RKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGL 134
RK A P+ + ++ +D + +A K+ D + ++ A+I +V+
Sbjct: 14 RKYHSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESR 73
Query: 135 YEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS 194
+ EA F+++ +GI+ +E+T+ ++I +S + G+QLH Y L+ + + +
Sbjct: 74 HVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASN----VF 129
Query: 195 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN 254
V +A++ Y K L AR FD ++VS ++SGY+ EEA +FR +PER+
Sbjct: 130 VGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERS 189
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLE-PCDYAYAGAIKACGVLGSLDNGQQIH 313
++TW +I G +++G EE++ F M EG+ P + + AI A + S G+ IH
Sbjct: 190 VVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIH 249
Query: 314 SQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVF--LTMPYVDSVSWNAMIAALAQHG 370
+ I+ LG ++ N+LI+ Y+KCG + + + F L + VSWN+MI A +G
Sbjct: 250 ACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNG 309
Query: 371 RGVQAIQLYEQMLKE-DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE-- 427
RG +A+ ++E+M+K+ ++ P+ +T L +L AC+HAGL++EG YF+ Y P
Sbjct: 310 RGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLE 368
Query: 428 -DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF 486
+HYA ++D+L R+G+F EA+++ +SMP +P W++LL GC+IH N L AA ++
Sbjct: 369 LEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKIL 428
Query: 487 ELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDD 546
EL P +Y++LSN Y+ + W V+ +R+ M+E G+K+ GCSWIE+ + + VF+ D
Sbjct: 429 ELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNAD 488
Query: 547 AVHPEVHAVYKYL 559
+ VY+ L
Sbjct: 489 KNNELKDEVYRML 501
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 182/403 (45%), Gaps = 56/403 (13%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
G P+ F+F TV+G+ S + + +QLHC +K G+ V + +L+CY+ ++ T
Sbjct: 88 GIRPNEFTFGTVIGS-STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLT- 145
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 124
AR+ FD+ + S T +I+GY++ + A L M V WNA
Sbjct: 146 --------DARRCFDDT--RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNA 195
Query: 125 MISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
+I G+ + G EEA +TF M G+ + +E T+ I+A N G+ +HA ++
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF 255
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM--PVRDLVSWNAILSGYINARRLE 241
+ + F + V N+LI+FY+KCG + + F+K+ R++VSWN+++ GY
Sbjct: 256 L---GKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGY------- 305
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKAC 300
A +G GEE++ +F +M K L P + G + AC
Sbjct: 306 ------------------------AHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSS---LSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
G + G ++ + D + L ++ M ++ G A+ + +MP +
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 358 S-WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
W A++ H A ++L+ D P ++ +LS
Sbjct: 402 GFWKALLGGCQIHSNKRLAKLAASKILELD--PRDVSSYVMLS 442
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 255/436 (58%), Gaps = 11/436 (2%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
L+ AR++ D + P A+N MISGY++HGL +E ++M G + D YT + ++ A
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 164 SFNTGLF-----NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDK 218
S + G + R +HA +++ V+ + I AL+ Y K GKL AR VF+
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDVELDDVLI----TALVDTYVKSGKLESARTVFET 200
Query: 219 MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG-FGEESLKL 277
M ++V +++SGY+N +E+A+ IF ++++ + M+ G + SG + S+ +
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
+ M+ G P +A I AC VL S + GQQ+H+Q+++ G + + G++L+ MYAK
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG + A VF M + SW +MI ++G +A++L+ +M + I P+ +TFL
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA 380
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
LSACSH+GLV +G F+SM Y M P +HYA ++DL+ RAG ++A + +MP P
Sbjct: 381 LSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERP 440
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQ-DGTYIILSNMYAHLGKWDEVARVR 516
+ IW +LL+ C +HGN+EL AA LF+L ++ G Y+ LSN+YA KWD V+++R
Sbjct: 441 DSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIR 500
Query: 517 KLMRERGVKKEPGCSW 532
++M+ R + K G SW
Sbjct: 501 EVMKRRRISKTIGRSW 516
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 159/361 (44%), Gaps = 64/361 (17%)
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 224
N+ G+++HA +++T QP L+++ L+ + KCG L AR+VFD++P L
Sbjct: 45 INSPAPKAGKKIHADIIKTGFQPD----LNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 225 VSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG-EESLKLFNQMKS 283
++N ++SGY+ ++E LL + SG G+ LK N S
Sbjct: 101 SAYNYMISGYLKHGLVKELL----------LLVQRMSYSGEKADGYTLSMVLKASNSRGS 150
Query: 284 EGLEP---CDYAYAGAIKACGV----------------LGSLDNGQQIHSQVIQLGHDSS 324
+ P C +A IK C V G L++ + V + D +
Sbjct: 151 TMILPRSLCRLVHARIIK-CDVELDDVLITALVDTYVKSGKLESAR----TVFETMKDEN 205
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQ-AIQLYEQML 383
+ ++I+ Y G V A+ +F T D V +NAM+ ++ G + ++ +Y M
Sbjct: 206 VVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQ 265
Query: 384 KEDILPDRITFLTILSACS-----------HAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+ P+ TF +++ ACS HA ++K G + TH M +
Sbjct: 266 RAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVY------THIKMG------SS 313
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQ 492
L+D+ + G ++A++V + M E + W S++ G +GN E ++ R+ E E
Sbjct: 314 LLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP 372
Query: 493 D 493
+
Sbjct: 373 N 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 130/321 (40%), Gaps = 75/321 (23%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEA-------- 138
D+ T ++ YV++ L SAR + + M V +MISGY+ G E+A
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 139 ------------------------FDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 174
D + M G + T+ S+I A G+
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 175 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 234
Q+HA ++++ V + + + ++L+ Y KCG + AR VFD+M +++ SW +++ GY
Sbjct: 294 QVHAQIMKSGV----YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 235 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYA 294
++G EE+L+LF +MK +EP +
Sbjct: 350 -------------------------------GKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG----NALITMYAKCGVVGYADMVFLT 350
GA+ AC G +D G +I + D S+ ++ + + G + A
Sbjct: 379 GALSACSHSGLVDKGYEIFE---SMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARA 435
Query: 351 MP-YVDSVSWNAMIAALAQHG 370
MP DS W A++++ HG
Sbjct: 436 MPERPDSDIWAALLSSCNLHG 456
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 51/235 (21%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+R GF P+ +F++V+GA S++ E QQ+H ++K GV + ++LL Y C
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVG-QQVHAQIMKSGVYTHIKMGSSLLDMYAKCG 322
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ AR++FD+ + +K+ SWT+MI GY +N
Sbjct: 323 G---------INDARRVFDQ--MQEKNVFSWTSMIDGYGKN------------------- 352
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
G EEA + F +M I+ + T+ +SA ++GL + G ++ +
Sbjct: 353 ------------GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM 400
Query: 181 LRTV-VQPS-EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 232
R ++P EH+ ++ + G L +A E MP R D W A+LS
Sbjct: 401 QRDYSMKPKMEHYA-----CIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS 450
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 36/245 (14%)
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
L P Y AGA++ + G++IH+ +I+ G L+ L+ ++ KCG + YA
Sbjct: 31 LSPAKY-IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYAR 89
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS--- 402
VF +P ++N MI+ +HG + + L ++M D T +L A +
Sbjct: 90 QVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG 149
Query: 403 -------------HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
HA ++K D + T L+D ++GK A+ V
Sbjct: 150 STMILPRSLCRLVHARIIKCDVELDDVLITA------------LVDTYVKSGKLESARTV 197
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
E+M E + S+++G G +E AE +F T +D ++ + M +
Sbjct: 198 FETMKDE-NVVCCTSMISGYMNQGFVE----DAEEIFNTTKVKD--IVVYNAMVEGFSRS 250
Query: 510 DEVAR 514
E A+
Sbjct: 251 GETAK 255
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 264/468 (56%), Gaps = 7/468 (1%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
+L ARKL D + +N +I Y H E+ + + G++ +T+ + +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
AS + R LH+ R+ + S+ F + LIT Y K G L AR VFD+M R
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFE-SDSFCCT---TLITAYAKLGALCCARRVFDEMSKR 146
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM- 281
D+ WNA+++GY ++ A +F +P +N+ +WT +ISG +++G E+LK+F M
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
K + ++P + AC LG L+ G+++ + G ++ NA I MY+KCG++
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 342 GYADMVFLTMPYVDSV-SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
A +F + ++ SWN+MI +LA HG+ +A+ L+ QML+E PD +TF+ +L A
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
C H G+V +GQ F SM + ++P +HY +IDLL R GK EA + ++MP +P A
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
+W +LL C HGN+E+ A+E LF+L P G +I+SN+YA KWD V R+RKLM+
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
Query: 521 ERGVKKEPGCSW-IEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMR 567
+ + K G S+ +E+ VH F V+D HP + +Y+ LE++ M+
Sbjct: 447 KETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 46/321 (14%)
Query: 57 ICCASSTLVESPVLMAS---ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 113
CC +TL+ + + + AR++FDE +S++D P W MI GY R D+ +A +L D
Sbjct: 118 FCC--TTLITAYAKLGALCCARRVFDE--MSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQMDEYTYTSLISASFNTGLFNC 172
M +W +ISG+ ++G Y EA F M ++ + T S++ A N G
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM-PVRDLVSWNAIL 231
GR+L Y + + V NA I Y+KCG + A+ +F+++ R+L SWN+
Sbjct: 234 GRRLEGYARENGFFDN----IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS-- 287
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
MI LA G +E+L LF QM EG +P
Sbjct: 288 -----------------------------MIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS-SLSAGNALITMYAKCGVVGYADMVFLT 350
+ G + AC G + GQ++ + ++ S L +I + + G + A + T
Sbjct: 319 TFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKT 378
Query: 351 MPYV-DSVSWNAMIAALAQHG 370
MP D+V W ++ A + HG
Sbjct: 379 MPMKPDAVVWGTLLGACSFHG 399
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 30/311 (9%)
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
+QLHA+ LRT V ++ + + LI LV AR++FD +N ++
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRL--LLIP------NLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVM---------ISGLAESGFGEESLKLF-NQMKS 283
Y + E+ ++ NLL++ + I + S L+L +Q
Sbjct: 57 YYVHHQPHESIVLY------NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFR 110
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
G E + I A LG+L +++ ++ + + NA+IT Y + G +
Sbjct: 111 SGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVPVWNAMITGYQRRGDMKA 166
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACS 402
A +F +MP + SW +I+ +Q+G +A++++ M K+ + P+ IT +++L AC+
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
+ G ++ G+ + G I++ + G AK++ E + + + W
Sbjct: 227 NLGELEIGRR-LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 285
Query: 463 ESLLAGCRIHG 473
S++ HG
Sbjct: 286 NSMIGSLATHG 296
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 271/517 (52%), Gaps = 46/517 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ Y + + A + D M V WN +ISGYV+ GL E+A + M ++
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D T +L+SA+ T G+++ Y +R + + + + ++ Y KCG +V
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD----IVLASTVMDMYAKCGSIVD 428
Query: 212 AREVFDKMPVRDLVSWNAILSGY-----------------------------------IN 236
A++VFD +DL+ WN +L+ Y +
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 237 ARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
+++EAK +F ++ NL++WT M++G+ ++G EE++ +M+ GL P ++
Sbjct: 489 NGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
A+ AC L SL G+ IH +I+ L H S +S +L+ MYAKCG + A+ VF +
Sbjct: 549 ITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK 608
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
Y + NAMI+A A +G +AI LY + + PD IT +LSAC+HAG + +
Sbjct: 609 LYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
F + + M P +HY ++DLL AG+ +A ++ E MPF+P A + +SL+A C
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNK 728
Query: 472 HGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
EL + +L E PE G Y+ +SN YA G WDEV ++R++M+ +G+KK+PGCS
Sbjct: 729 QRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Query: 532 WIEI--ENMVHVFLVDDAVHPEVHAVYKYLEQLVIEM 566
WI+I E VHVF+ +D H ++ + L L+ +M
Sbjct: 789 WIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 177/393 (45%), Gaps = 37/393 (9%)
Query: 76 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 135
++ ++E T ++ Y + D L A L + +W A+I R GL
Sbjct: 95 RILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLC 154
Query: 136 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 195
E A F +M I D + ++ A GR +H YV+++ ++ + V
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC----VFV 210
Query: 196 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 255
++L Y KCG L A +VFD++P R+ V+WNA++ GY+
Sbjct: 211 ASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV-------------------- 250
Query: 256 LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
++G EE+++LF+ M+ +G+EP + + A +G ++ G+Q H+
Sbjct: 251 -----------QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAI 299
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
I G + G +L+ Y K G++ YA+MVF M D V+WN +I+ Q G A
Sbjct: 300 AIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
I + + M E + D +T T++SA + +K G+ C + + ++D
Sbjct: 360 IYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE-VQCYCIRHSFESDIVLASTVMD 418
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ + G +AKKV +S E +W +LLA
Sbjct: 419 MYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 192/426 (45%), Gaps = 59/426 (13%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
L A K+ D + AVAWNA++ GYV++G EEA F M G++ T ++ +SA
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
S N G G+Q HA + ++ + +L+ FY K G + A VFD+M +D
Sbjct: 284 SANMGGVEEGKQSHAIAIVNGMELDN----ILGTSLLNFYCKVGLIEYAEMVFDRMFEKD 339
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
+V+WN I+SGY+ +E+A ++ + + L V ++ L + E+LKL
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL------ 393
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
G+++ I+ +S + + ++ MYAKCG +
Sbjct: 394 -------------------------GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
A VF + D + WN ++AA A+ G +A++L+ M E + P+ IT+ I+ +
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLR 488
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA----KKVTESMPFEPSA 459
G V E + F M + G+ P + +++ + + G EA +K+ ES P+A
Sbjct: 489 NGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES-GLRPNA 546
Query: 460 PIWESLLAGC----------RIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
L+ C IHG I +Q + + T L +MYA G
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETS--------LVDMYAKCGDI 598
Query: 510 DEVARV 515
++ +V
Sbjct: 599 NKAEKV 604
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 39/365 (10%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P + ++ +S ++G +EA +M +++ Y ++ + G+Q+
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 177 HAYVLRT--VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 234
HA +L+ +E+ + L+ FY KC L A +F K+ VR
Sbjct: 93 HARILKNGDFYARNEY----IETKLVIFYAKCDALEIAEVLFSKLRVR------------ 136
Query: 235 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYA 294
N+ +W +I G E +L F +M + P ++
Sbjct: 137 -------------------NVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVP 177
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
KACG L G+ +H V++ G + + ++L MY KCGV+ A VF +P
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR 237
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
++V+WNA++ Q+G+ +AI+L+ M K+ + P R+T T LSA ++ G V+EG+
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
++ GM L++ C+ G A+ V + M FE W +++G G
Sbjct: 298 -AIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGL 355
Query: 475 IELGI 479
+E I
Sbjct: 356 VEDAI 360
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 58/284 (20%)
Query: 50 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY----------- 98
+T++ Y C S + A+K+FD +KD W T++A Y
Sbjct: 414 STVMDMYAKCGS---------IVDAKKVFDSTV--EKDLILWNTLLAAYAESGLSGEALR 462
Query: 99 ------------------------VRNDDLASARKLLDGMTH----PIAVAWNAMISGYV 130
+RN + A+ + M P ++W M++G V
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
++G EEA RKM G++ + ++ T +SA + + GR +H Y++R + S
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS-- 580
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
++S+ +L+ Y KCG + +A +VF +L NA++S Y L+EA ++R +
Sbjct: 581 -LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 251 PERNL----LTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPC 289
L +T T ++S +G +++++F + S+ ++PC
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 273/521 (52%), Gaps = 43/521 (8%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
M A+ LF + +S+K+ +WT+M+ GY R D+ A +L M V+W AMISG+
Sbjct: 216 MEEAKLLFGD--MSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG-----LFNCGRQLHAYVLRTVV 185
+ LY EA F +M + +LIS ++ G G QLHA V+
Sbjct: 274 WNELYREALMLFLEMKK-DVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGW 332
Query: 186 QPSEH----------------------------FILSVNNALITFYTKCGKLVQAREVFD 217
+ +H F L N +I Y K G L +A +F+
Sbjct: 333 ETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFE 392
Query: 218 KMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
++ + D VSW +++ GY+ A + A +F+++ +++ +TWTVMISGL ++ E+
Sbjct: 393 RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG--HDSSLSAGNALITM 334
L + M GL+P + Y+ + + G +LD G+ IH + + +D L N+L++M
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
YAKCG + A +F M D+VSWN+MI L+ HG +A+ L+++ML P+ +TF
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
L +LSACSH+GL+ G F +M Y + PG DHY +IDLL RAGK EA++ ++P
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
Query: 455 FEPSAPIWESLLAGCRIHGNIE----LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
F P ++ +LL C ++ + + +AA RL EL P ++ L N+YA LG+ D
Sbjct: 633 FTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHD 692
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPE 551
+RK M +GVKK PGCSW+ + +VFL D E
Sbjct: 693 MEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 235/528 (44%), Gaps = 79/528 (14%)
Query: 71 MASARKLFDEAPL--SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 128
+ AR L D+ P S WT++++ Y + L AR L + M V NAM++G
Sbjct: 58 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTG 117
Query: 129 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 188
YV+ EA+ FR+M + ++T +++A L + GR A L +
Sbjct: 118 YVKCRRMNEAWTLFREMPK-----NVVSWTVMLTA-----LCDDGRSEDAVEL--FDEMP 165
Query: 189 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 248
E ++S N L+T + G + +A++VFD MP RD+VSWNA++ GYI +EEAK +F
Sbjct: 166 ERNVVSWN-TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 249 -------------------------------EVPERNLLTWTVMISGLAESGFGEESLKL 277
E+PERN+++WT MISG A + E+L L
Sbjct: 225 DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Query: 278 FNQMKS--EGLEPCDYAYAGAIKACGVLGSLDN--GQQIHSQVIQLG-----HDSSLSAG 328
F +MK + + P ACG LG G+Q+H+QVI G HD L+
Sbjct: 285 FLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLA-- 342
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
+L+ MYA G++ A L D S N +I ++G +A L+E++ L
Sbjct: 343 KSLVHMYASSGLIASAQS--LLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS---L 397
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
D++++ +++ AG V F + G+T + +I L + F+EA
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAAS 452
Query: 449 VTESM---PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYII---LSNM 502
+ M +P + LL+ N++ G + + T D I+ L +M
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 503 YAHLGKWDEVARVRKLMRERGVKKEPGCSWIE-IENMVHVFLVDDAVH 549
YA G ++ + M V+K+ SW I + H L D A++
Sbjct: 513 YAKCGAIEDAYEIFAKM----VQKDT-VSWNSMIMGLSHHGLADKALN 555
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 48/260 (18%)
Query: 193 LSVNNALITFYTKCGKLVQAREVFDK---------------------------------- 218
S ALI G LV AR + DK
Sbjct: 42 FSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFE 101
Query: 219 -MPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
MP R++V+ NA+L+GY+ RR+ EA +FRE+P +N+++WTVM++ L + G E++++L
Sbjct: 102 VMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVEL 160
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F++M + + G I+ G ++ +Q+ + + + NA+I Y +
Sbjct: 161 FDEMPERNVVSWNTLVTGLIRN----GDMEKAKQVFDAM----PSRDVVSWNAMIKGYIE 212
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
+ A ++F M + V+W +M+ ++G +A +L+ +M + +I +++ +
Sbjct: 213 NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAM 268
Query: 398 LSACSHAGLVKEGQHYFDSM 417
+S + L +E F M
Sbjct: 269 ISGFAWNELYREALMLFLEM 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 30/281 (10%)
Query: 304 GSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMI 363
G L + + + ++ Q G + + +L++ YAK G + A ++F MP + V+ NAM+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 364 AALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGM 423
+ R +A L+ +M K + +++ +L+A G ++ FD M +
Sbjct: 116 TGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 424 TPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIEL-GIQAA 482
+ + L+ L R G +AK+V ++MP W ++ I G IE G++ A
Sbjct: 171 S-----WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS-WNAM-----IKGYIENDGMEEA 219
Query: 483 ERLF-ELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGV----KKEPGCSWIEIEN 537
+ LF +++ + T+ + Y G E R+ M ER + G +W E+
Sbjct: 220 KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYR 279
Query: 538 MVHVFLVD-----DAVHPEVHAVYKYLEQ---LVIEMRKLG 570
+ ++ DAV P + L +E R+LG
Sbjct: 280 EALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 219/350 (62%), Gaps = 2/350 (0%)
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
+ D+ ++++ Y ++ +E A +F E+PERN+++WT MISG A+ + LKL+++
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
M+ +P DY + + AC G+L G+ +H Q + +G S L N+LI+MY KCG
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILS 399
+ A +F D VSWN+MIA AQHG +QAI+L+E M+ K PD IT+L +LS
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 400 ACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSA 459
+C HAGLVKEG+ +F+ M H G+ P +HY+ L+DLL R G EA ++ E+MP +P++
Sbjct: 332 SCRHAGLVKEGRKFFNLMAEH-GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 460 PIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLM 519
IW SLL CR+HG++ GI+AAE L P+ T++ L+N+YA +G W E A VRKLM
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLM 450
Query: 520 RERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
+++G+K PGCSWIEI N V +F +D + + + L L+ M L
Sbjct: 451 KDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEFL 500
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 135/294 (45%), Gaps = 37/294 (12%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++++ Y + ++ +A K+ + M V+W AMISG+ + + + KM
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
++YT+T+L+SA +G GR +H L ++ H ++N+LI+ Y KCG L
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH----ISNSLISMYCKCGDLKD 274
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +FD+ +D+VSWN++++GY A+ G
Sbjct: 275 AFRIFDQFSNKDVVSWNSMIAGY-------------------------------AQHGLA 303
Query: 272 EESLKLFN-QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
++++LF M G +P Y G + +C G + G++ + + + G L+ +
Sbjct: 304 MQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSC 363
Query: 331 LITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQML 383
L+ + + G++ A + MP +SV W +++ + HG I+ E+ L
Sbjct: 364 LVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKC 338
+ +K +G Y + A+++CG+ G H ++ G S + G++L+ +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 339 GVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTIL 398
G V A VF MP + VSW AMI+ AQ R ++LY +M K P+ TF +L
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 399 SACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
SAC+ +G + +G+ H G+ LI + C+ G +A ++ +
Sbjct: 229 SACTGSGALGQGRS-VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKD 286
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG------TYIILSNMYAHLGKWDEV 512
W S++AG HG L +QA E LFEL + G TY+ + + H G E
Sbjct: 287 VVSWNSMIAGYAQHG---LAMQAIE-LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 513 ARVRKLMRERGVKKE 527
+ LM E G+K E
Sbjct: 343 RKFFNLMAEHGLKPE 357
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 123/299 (41%), Gaps = 66/299 (22%)
Query: 1 MKRDGFAPDPFSFSTVL----GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCY 56
M++ P+ ++F+ +L G+ +L HCQ LH G+ + N+L+S Y
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHM-----GLKSYLHISNSLISMY 266
Query: 57 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 116
C + A ++FD+ S KD SW +MIA
Sbjct: 267 CKCGD---------LKDAFRIFDQ--FSNKDVVSWNSMIA-------------------- 295
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFR-KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
GY +HGL +A + F M G + D TY ++S+ + GL GR+
Sbjct: 296 -----------GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSGY 234
+ ++P L+ + L+ + G L +A E+ + MP++ + V W ++L
Sbjct: 345 FFNLMAEHGLKPE----LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL--- 397
Query: 235 INARRLEEAKFIFREVPERNLL------TWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
+ R + R ER +L T + + A G+ +E+ + MK +GL+
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLK 456
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 280/555 (50%), Gaps = 78/555 (14%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYE-EAFDTFRKMHSMGI 150
+ I Y R+ AR++ D M+ ++WN+++SG + G + EA FR M G+
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
++D ++TS+I+ + RQ+H ++ + +L V N L++ Y+KCG L
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES----LLEVGNILMSRYSKCGVLE 328
Query: 211 QAREVFDKMPVRDLVSWNAILS--------------------------GYINARRLEE-- 242
+ VF +M R++VSW ++S G INA + E
Sbjct: 329 AVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Query: 243 -------------------------------------AKFIFREVPERNLLTWTVMISGL 265
AK F ++ R +++W MISG
Sbjct: 389 KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGF 448
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG--SLDNGQQIHSQVIQLGHDS 323
A++GF E+LK+F +E + P +Y + + A S+ GQ+ H+ +++LG +S
Sbjct: 449 AQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS 507
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
+AL+ MYAK G + ++ VF M + W ++I+A + HG + L+ +M+
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMI 567
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
KE++ PD +TFL++L+AC+ G+V +G F+ M Y + P +HY+ ++D+L RAG+
Sbjct: 568 KENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 627
Query: 444 SEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMY 503
EA+++ +P P + +S+L CR+HGN+++G + AE E+ PE G+Y+ + N+Y
Sbjct: 628 KEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
Query: 504 AHLGKWDEVARVRKLMRERGVKKEPGCSWIEIEN-----MVHVFLVDDAVHPEVHAVYKY 558
A +WD+ A +RK MR++ V KE G SWI++ + + F D HP+ +Y+
Sbjct: 688 AEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRM 747
Query: 559 LEQLVIEMRKLGYIP 573
+E + +EM G +
Sbjct: 748 VEIIGLEMNLEGKVA 762
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 169/377 (44%), Gaps = 46/377 (12%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + +A + + + P V+WN ++SG+ + + A + +M S G+ D +TY
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTY 177
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
++ +S + F G QL + V++T ++ L V N+ IT Y++ G AR
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESD----LVVGNSFITMYSRSGSFRGARR--- 230
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG-FGEESLK 276
+F E+ +++++W ++SGL++ G FG E++
Sbjct: 231 ----------------------------VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVV 262
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
+F M EG+E ++ I C L +QIH I+ G++S L GN L++ Y+
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYS 322
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
KCGV+ VF M + VSW MI++ A+ ++ M + + P+ +TF+
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVG 377
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
+++A +KEG +C G I L + +AKK E + F
Sbjct: 378 LINAVKCNEQIKEGLK-IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 457 PSAPIWESLLAGCRIHG 473
W ++++G +G
Sbjct: 437 EIIS-WNAMISGFAQNG 452
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 102/178 (57%), Gaps = 6/178 (3%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
NA++ Y A R + A IF + + ++++W ++SG ++ + +L +MKS G+
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVV 171
Query: 288 PCDYAYAGAIKAC-GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADM 346
+ Y+ A+ C G G L G Q+ S V++ G +S L GN+ ITMY++ G A
Sbjct: 172 FDAFTYSTALSFCVGSEGFLL-GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 347 VFLTMPYVDSVSWNAMIAALAQHGR-GVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
VF M + D +SWN++++ L+Q G G +A+ ++ M++E + D ++F ++++ C H
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 75/179 (41%), Gaps = 9/179 (5%)
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
A+KAC G L G QIH G S + NA++ MY K G A +F + D
Sbjct: 84 ALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC-SHAGLVKEGQHYF 414
VSWN +++ + A+ +M ++ D T+ T LS C G + Q
Sbjct: 142 VVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ--L 196
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
S G+ I + R+G F A++V + M F+ W SLL+G G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMIS-WNSLLSGLSQEG 254
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 239/441 (54%), Gaps = 1/441 (0%)
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
D + +++ Y +E A +F E+P R+L++W VMI + G ++L ++ +M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG 342
+EG+ Y + +C + +L+ G +H + +S + NALI MYAKCG +
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
A VF M D ++WN+MI HG GV+AI + +M+ + P+ ITFL +L CS
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
H GLVKEG +F+ M + + +TP HY ++DL RAG+ + ++ + +W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 463 ESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRER 522
+LL C+IH N+ELG A ++L +L G Y++++++Y+ A +RKL+R
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 523 GVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIP-DTKFVLHD 581
++ PG SWIEI + VH F+VDD +HPE +Y L +++ GY P D+
Sbjct: 441 DLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPT 500
Query: 582 MESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXX 641
+ A ++HSEKLA+ YG+++ G T+R+ KNLR+C DCH+ K++SK
Sbjct: 501 LSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREII 560
Query: 642 XXXXXXXXXXXNGECSCGNYW 662
+G CSC +YW
Sbjct: 561 VRDRVRFHHFADGICSCNDYW 581
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 9/226 (3%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ Y N + A K+ D M V+WN MI + GL+ +A +++M + G+
Sbjct: 146 TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC 205
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D YT +L+S+ + N G LH R + V+NALI Y KCG L
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLH----RIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 212 AREVFDKMPVRDLVSWNAILSGY-INARRLEEAKFIFREVP---ERNLLTWTVMISGLAE 267
A VF+ M RD+++WN+++ GY ++ +E F + V N +T+ ++ G +
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 268 SGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQI 312
G +E ++ F M S+ L P Y + G G L+N ++
Sbjct: 322 QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 14/229 (6%)
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCD-YAYAGAIKACGVLGSLDNGQQIHSQV 316
W +I G + S S+ +N+M + D + + A+K+C + S+ +IH V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
I+ G +L+ Y+ G V A VF MP D VSWN MI + G QA+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKEG----QHYFDSMCTHYGMTPGEDHYAR 432
+Y++M E + D T + +LS+C+H + G + D C
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA----- 248
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
LID+ + G A V M + W S++ G +HG+ G++A
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGH---GVEA 293
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/567 (29%), Positives = 294/567 (51%), Gaps = 54/567 (9%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
++ G PD F+ VL ++ + + +++H VK G+ V N+L+ Y A
Sbjct: 37 LRGQGLYPDNFTLPVVLKSIGRL-RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMY---A 92
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S +E K+FDE P Q+D V
Sbjct: 93 SLGKIEI------THKVFDEMP--QRD-------------------------------VV 113
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
+WN +IS YV +G +E+A F++M ++ DE T S +SA G +++ +
Sbjct: 114 SWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRF 173
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
V+ + + NAL+ + KCG L +AR VFD M +++ W +++ GY++ R
Sbjct: 174 VVTEF-----EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGR 228
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
++EA+ +F P ++++ WT M++G + +E+L+LF M++ G+ P ++ +
Sbjct: 229 IDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTG 288
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
C G+L+ G+ IH + + G AL+ MYAKCG + A VF + D+ SW
Sbjct: 289 CAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASW 348
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
++I LA +G +A+ LY +M + D ITF+ +L+AC+H G V EG+ F SM
Sbjct: 349 TSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE 408
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS---APIWESLLAGCRIHGNIE 476
+ + P +H + LIDLLCRAG EA+++ + M E P++ SLL+ R +GN++
Sbjct: 409 RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVK 468
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
+ + AE+L ++ + +L+++YA +W++V VR+ M++ G++K PGCS IEI+
Sbjct: 469 IAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEID 528
Query: 537 NMVHVFLVDDAV--HPEVHAVYKYLEQ 561
+ H F+V D + HP++ + L Q
Sbjct: 529 GVGHEFIVGDDLLSHPKMDEINSMLHQ 555
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 140/276 (50%), Gaps = 9/276 (3%)
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
+LL + M+ LA+ + L LF +++ +GL P ++ +K+ G L + G+++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 314 SQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV 373
++ G + N+L+ MYA G + VF MP D VSWN +I++ +GR
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 374 QAIQLYEQMLKEDILP-DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
AI ++++M +E L D T ++ LSACS ++ G+ + + T + M+ +
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--A 187
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQ 492
L+D+ C+ G +A+ V +SM + + W S++ G G I+ A LFE +P +
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRID----EARVLFERSPVK 242
Query: 493 DGT-YIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
D + + N Y ++DE + + M+ G++ +
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD 278
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 162/388 (41%), Gaps = 68/388 (17%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P + +N M+ + + F ++ G+ D +T ++ + G ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H Y ++ ++ F V+N+L+ Y GK+ +VFD+MP RD+VSWN ++S Y+
Sbjct: 69 HGYAVKAGLE----FDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
R E+A +F+ + + E +LK EG
Sbjct: 125 NGRFEDAIGVFKRMSQ-------------------ESNLKF-----DEG------TIVST 154
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM----- 351
+ AC L +L+ G++I+ V+ + S+ GNAL+ M+ KCG + A VF +M
Sbjct: 155 LSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 352 --------------------------PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
P D V W AM+ Q R +A++L+ M
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
I PD +++L+ C+ G +++G+ + +T + L+D+ + G
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGK-WIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHG 473
A +V + +A W SL+ G ++G
Sbjct: 333 ALEVFYEIKERDTAS-WTSLIYGLAMNG 359
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 264/497 (53%), Gaps = 38/497 (7%)
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
M P +NA+ G+V + + + +M + YTY+SL+ AS F G
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--G 888
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW------ 227
L A++ + F + + LI FY+ G++ +AR+VFD+MP RD ++W
Sbjct: 889 ESLQAHIWKFGFG----FHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSA 944
Query: 228 -------------------------NAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 262
N +++GY+ LE+A+ +F ++P +++++WT MI
Sbjct: 945 YRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMI 1004
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
G +++ E++ +F +M EG+ P + + I AC LG L+ G+++H +Q G
Sbjct: 1005 KGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV 1064
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
+ G+AL+ MY+KCG + A +VF +P + WN++I LA HG +A++++ +M
Sbjct: 1065 LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM 1124
Query: 383 LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGK 442
E + P+ +TF+++ +AC+HAGLV EG+ + SM Y + +HY ++ L +AG
Sbjct: 1125 EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGL 1184
Query: 443 FSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNM 502
EA ++ +M FEP+A IW +LL GCRIH N+ + A +L L P G Y +L +M
Sbjct: 1185 IYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSM 1244
Query: 503 YAHLGKWDEVARVRKLMRERGVKKE-PGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQ 561
YA +W +VA +R MRE G++K PG S I I+ H+F D H V L++
Sbjct: 1245 YAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDE 1304
Query: 562 LVIEMRKLGYIPDTKFV 578
+ +M GY+ +T+ V
Sbjct: 1305 IYDQMGLAGYVQETENV 1321
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 189/421 (44%), Gaps = 92/421 (21%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M RD +P +++S+++ A S + + L + K+G + TL+ Y A
Sbjct: 862 MLRDSVSPSSYTYSSLVKASSFASR---FGESLQAHIWKFGFGFHVKIQTTLIDFY--SA 916
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH---- 116
+ + E ARK+FDE P ++D+ +WTTM++ Y R D+ SA L + M+
Sbjct: 917 TGRIRE-------ARKVFDEMP--ERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 967
Query: 117 -------------------------PIA--VAWNAMISGYVRHGLYEEAFDTFRKMHSMG 149
P+ ++W MI GY ++ Y EA F KM G
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 150 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV--NNALITFYTKCG 207
I DE T +++ISA + G+ G+++H Y L+ F+L V +AL+ Y+KCG
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN------GFVLDVYIGSALVDMYSKCG 1081
Query: 208 KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
L +A VF +P ++L WN+I I GLA
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSI-------------------------------IEGLAA 1110
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
GF +E+LK+F +M+ E ++P + AC G +D G++I+ +I D S+ +
Sbjct: 1111 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID---DYSIVS 1167
Query: 328 G----NALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
++ +++K G++ A + M + ++V W A++ H V A + ++
Sbjct: 1168 NVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKL 1227
Query: 383 L 383
+
Sbjct: 1228 M 1228
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 136/359 (37%), Gaps = 75/359 (20%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N ++ + +RL+ A ++ E N+ + + G SL+L+ +M + +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P Y Y+ +KA G+ + + + + G + LI Y+ G + A V
Sbjct: 869 PSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 348 FLTMPYVDSVSWNAMIAA------------LAQH-------------------GRGVQAI 376
F MP D ++W M++A LA G QA
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 377 QLYEQM-------------------------------LKEDILPDRITFLTILSACSHAG 405
L+ QM ++E I+PD +T T++SAC+H G
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 406 LVKEGQHYFDSMCTHYGMTPG--EDHY--ARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
+++ G+ Y + G D Y + L+D+ + G A V ++P + +
Sbjct: 1047 VLEIGKEVH-----MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFC 1100
Query: 462 WESLLAGCRIHGNIELGIQAAERL-FELTPEQDGTYIILSNMYAHLGKWDEVARVRKLM 519
W S++ G HG + ++ ++ E T++ + H G DE R+ + M
Sbjct: 1101 WNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 278/576 (48%), Gaps = 82/576 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ +G PD ++F ++L A E +++H K G CY+
Sbjct: 152 MRANGILPDKYTFPSLLKGSD--AMELSDVKKVHGLAFKLGFDS---------DCYVGSG 200
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
T + + A+K+FDE P +D+ +V
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELP--DRDD------------------------------SV 228
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
WNA+++GY + +E+A F KM G+ + +T TS++SA +G + GR +H
Sbjct: 229 LWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLA 288
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++T + V+NALI Y K ++ L
Sbjct: 289 VKTGSGSD----IVVSNALIDMYGK-------------------------------SKWL 313
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
EEA IF + ER+L TW ++ G + +L LF +M G+ P + C
Sbjct: 314 EEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTC 373
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAG----NALITMYAKCGVVGYADMVFLTMPYVDS 356
G L SL G++IH +I G + S+ N+L+ MY KCG + A MVF +M DS
Sbjct: 374 GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDS 433
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
SWN MI G A+ ++ M + + PD ITF+ +L ACSH+G + EG+++
Sbjct: 434 ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ 493
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
M T Y + P DHYA +ID+L RA K EA ++ S P + +W S+L+ CR+HGN +
Sbjct: 494 METVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKD 553
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
L + A +RL EL PE G Y+++SN+Y GK++EV VR MR++ VKK PGCSWI ++
Sbjct: 554 LALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLK 613
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYI 572
N VH F + HPE +++ +L ++ M Y+
Sbjct: 614 NGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G+Q+H +++R +L+ Y KCG + +A VF
Sbjct: 79 GQQIHGFMVRKGFLDDSP---RAGTSLVNMYAKCGLMRRAVLVFGG-------------- 121
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
ER++ + +ISG +G ++++ + +M++ G+ P Y
Sbjct: 122 ------------------SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
+ +K + L + +++H +LG DS G+ L+T Y+K V A VF +P
Sbjct: 164 FPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP 222
Query: 353 -YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
DSV WNA++ +Q R A+ ++ +M +E + R T ++LSA + +G + G+
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGR 282
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
+ G LID+ ++ EA + E+M E W S+L
Sbjct: 283 S-IHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVL 335
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 24/172 (13%)
Query: 308 NGQQIHSQVIQLGH-DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAAL 366
+GQQIH +++ G D S AG +L+ MYAKCG++ A +VF D +NA+I+
Sbjct: 78 SGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSER-DVFGYNALISGF 136
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS----------HAGLVKEGQHYFDS 416
+G + A++ Y +M ILPD+ TF ++L H K G FDS
Sbjct: 137 VVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLG---FDS 193
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
C Y + Y++ + + +A+KV + +P + +W +L+ G
Sbjct: 194 DC--YVGSGLVTSYSKFMSV-------EDAQKVFDELPDRDDSVLWNALVNG 236
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 257/503 (51%), Gaps = 46/503 (9%)
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 121
++L +S +L+A +R+L A S + + + +ASA K+ M V
Sbjct: 3 TSLRDSSLLVAESRELITHAKCST-ESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVL 61
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
W +MI+GY+ N L + R
Sbjct: 62 WTSMINGYL----------------------------------LNKDLVSARRYFD---- 83
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+ P +L N +I+ Y + G +++AR +FD+MP RD++SWN +L GY N +E
Sbjct: 84 ---LSPERDIVLW--NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDME 138
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKAC 300
+ +F ++PERN+ +W +I G A++G E L F +M EG + P D + AC
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 301 GVLGSLDNGQQIHSQVIQLGHDS-SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
LG+ D G+ +H LG++ ++ NALI MY KCG + A VF + D +SW
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
N MI LA HG G +A+ L+ +M I PD++TF+ +L AC H GLV++G YF+SM T
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
+ + P +H ++DLL RAG ++A + MP + A IW +LL +++ +++G
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGE 378
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
A E L +L P +++LSN+Y G++D+ AR++ MR+ G KKE G SWIE ++ +
Sbjct: 379 VALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGL 438
Query: 540 HVFLVDDAVHPEVHAVYKYLEQL 562
F HP + + L +L
Sbjct: 439 VKFYSSGEKHPRTEELQRILREL 461
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 178/419 (42%), Gaps = 90/419 (21%)
Query: 36 DVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMI 95
D+V W NT++S YI + M AR LFD+ P +D SW T++
Sbjct: 89 DIVLW---------NTMISGYIEMGN---------MLEARSLFDQMPC--RDVMSWNTVL 128
Query: 96 AGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDE 154
GY D+ + ++ D M +WN +I GY ++G E +F++M G + ++
Sbjct: 129 EGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND 188
Query: 155 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 214
T T ++SA G F+ G+ +H Y + ++V NALI Y KCG + A E
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD---VNVKNALIDMYGKCGAIEIAME 245
Query: 215 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 274
VF + RDL+SWN MI+GLA G G E+
Sbjct: 246 VFKGIKRRDLISWNT-------------------------------MINGLAAHGHGTEA 274
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
L LF++MK+ G+ P + G + AC +G +++G L + +S+ +++
Sbjct: 275 LNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG---------LAYFNSMFTDFSIMPE 325
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
CG V + L++ G QA++ +M + D + +
Sbjct: 326 IEHCGCV---------------------VDLLSRAGFLTQAVEFINKM---PVKADAVIW 361
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
T+L A V G+ + + P ++ L ++ AG+F +A ++ +M
Sbjct: 362 ATLLGASKVYKKVDIGEVALEELIKLEPRNPA--NFVMLSNIYGDAGRFDDAARLKVAM 418
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 300/591 (50%), Gaps = 61/591 (10%)
Query: 92 TTMIAGYVRNDDLASARK---LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 148
+I+ Y R D A+A + + + + V WN+MI+ + L ++A F +MHS
Sbjct: 196 NAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD 255
Query: 149 GIQMDEYTYTSLISASFNTG------LFNCGRQLHAYVLRT-VVQPSE--HFILSVNNAL 199
G+ D T ++ S+ + + + C QLH+ +++ +V +E ++ V + +
Sbjct: 256 GVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM 315
Query: 200 ITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTW 258
+ YT C KL F +M RD+V+WN I++ + ++ PER
Sbjct: 316 LEDYTDCYKL------FMEMSHCRDIVAWNGIITAFA----------VYD--PER----- 352
Query: 259 TVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ 318
++ LF Q++ E L P Y ++ +KAC L + + IH+QVI+
Sbjct: 353 ---------------AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIK 397
Query: 319 LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQL 378
G + N+LI YAKCG + VF M D VSWN+M+ A + HG+ + +
Sbjct: 398 GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPV 457
Query: 379 YEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLC 438
+++M DI PD TF+ +LSACSHAG V+EG F SM P +HYA +ID+L
Sbjct: 458 FQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLS 514
Query: 439 RAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELT-PEQDGTYI 497
RA +F+EA++V + MP +P A +W +LL CR HGN LG AA++L EL P +YI
Sbjct: 515 RAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYI 574
Query: 498 ILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYK 557
+SN+Y G ++E K M V+KEP SW EI N VH F P+ AVY+
Sbjct: 575 QMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYR 634
Query: 558 YLEQLVIEMRKLGYIPDTKFV-LHDMESEHKEHALSTHSEKLAVVYGILKLPLGAT---- 612
L++L+ ++++GY+P+ + + E +E L HSEKLA+ + +++ +
Sbjct: 635 ELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVN 694
Query: 613 -IRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
I++ KN R+C DCHN K SK + CSC +YW
Sbjct: 695 LIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 199/441 (45%), Gaps = 58/441 (13%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y + ++ AR++ D M V+W A+I+GYV+ G +E F F M S +
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP-N 160
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
E+T +S++++ + G+Q+H L+ + H + V NA+I+ Y +C A
Sbjct: 161 EFTLSSVLTSC----RYEPGKQVHGLALKLGL----HCSIYVANAVISMYGRCHDGAAAY 212
Query: 214 E---VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
E VF+ + ++LV+WN++++ + ++A +F + G
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMR---------------MHSDGV 257
Query: 271 GEESLKLFN----QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
G + L N KS L P + + K C Q+HS ++ G +
Sbjct: 258 GFDRATLLNICSSLYKSSDLVPNEVS-----KCC---------LQLHSLTVKSGLVTQTE 303
Query: 327 AGNALITMYAKCGVVGYAD--MVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQML 383
ALI +Y++ + Y D +F+ M + D V+WN +I A A + +AI L+ Q+
Sbjct: 304 VATALIKVYSEM-LEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLR 361
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFD--SMCTHYGMTPGEDHYARLIDLLCRAG 441
+E + PD TF ++L AC AGLV +H + G LI + G
Sbjct: 362 QEKLSPDWYTFSSVLKAC--AGLVT-ARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCG 418
Query: 442 KFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSN 501
+V + M W S+L +HG ++ + +++ ++ P+ T+I L +
Sbjct: 419 SLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHGQVDSILPVFQKM-DINPD-SATFIALLS 475
Query: 502 MYAHLGKWDEVARVRKLMRER 522
+H G+ +E R+ + M E+
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEK 496
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 45/275 (16%)
Query: 130 VRHGLYEEAFDTFRKMHSMGIQMD-EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 188
VR G A F +S +++ + Y +L A G LH ++L S
Sbjct: 37 VRSGDIRRAVSLF---YSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYS 93
Query: 189 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR 248
++ IL+ N LI Y KCG ++ AR+VFD M
Sbjct: 94 QNVILA--NFLINMYAKCGNILYARQVFDTM----------------------------- 122
Query: 249 EVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDN 308
PERN+++WT +I+G ++G +E LF+ M S P ++ + + +C +
Sbjct: 123 --PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSC----RYEP 175
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKC--GVVGY-ADMVFLTMPYVDSVSWNAMIAA 365
G+Q+H ++LG S+ NA+I+MY +C G Y A VF + + + V+WN+MIAA
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
G +AI ++ +M + + DR T L I S+
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQ--LGHDSSLSAGNALITMYAKCGVVGYADMVFL 349
AYA +AC +L +G +H ++ + ++ N LI MYAKCG + YA VF
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 350 TMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS------- 402
TMP + VSW A+I Q G + L+ ML P+ T ++L++C
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTSCRYEPGKQV 179
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS-EAKKVTESMPFEPSAPI 461
H +K G H C+ Y Y R C G + EA V E++ F+ +
Sbjct: 180 HGLALKLGLH-----CSIYVANAVISMYGR-----CHDGAAAYEAWTVFEAIKFK-NLVT 228
Query: 462 WESLLAG 468
W S++A
Sbjct: 229 WNSMIAA 235
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 57/284 (20%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
++++ +PD ++FS+VL A + + H +H V+K G + + N+L+ Y C
Sbjct: 360 LRQEKLSPDWYTFSSVLKACAGLVTAR-HALSIHAQVIKGGFLADTVLNNSLIHAYAKCG 418
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S L ++FD+ + +D SW
Sbjct: 419 SLDL---------CMRVFDD--MDSRDVVSW----------------------------- 438
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
N+M+ Y HG + F+K M I D T+ +L+SA + G G + +
Sbjct: 439 --NSMLKAYSLHGQVDSILPVFQK---MDINPDSATFIALLSACSHAGRVEEGLR----I 489
Query: 181 LRTVVQPSEHF-ILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG---YI 235
R++ + E L+ +I ++ + +A EV +MP+ D V W A+L +
Sbjct: 490 FRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHG 549
Query: 236 NARRLEEAKFIFREVPERNLLTWTVMISGL--AESGFGEESLKL 277
N R + A +E+ E + +S + AE F E +L +
Sbjct: 550 NTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSI 593
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 286/627 (45%), Gaps = 119/627 (18%)
Query: 12 SFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLM 71
SF+ LGA S +E +Q+HCDVVK G+ P V +LLS Y C ++
Sbjct: 274 SFTGALGACSQ-SENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG---------MV 323
Query: 72 ASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVR 131
A +F K L+ WNAM++ Y
Sbjct: 324 GEAETVFS-------------------------CVVDKRLE--------IWNAMVAAYAE 350
Query: 132 HGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHF 191
+ A D F M + D +T +++IS GL+N G+ +HA + + +Q +
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS-- 408
Query: 192 ILSVNNALITFYTKC-------------------------------GKLVQAREVFDKMP 220
++ +AL+T Y+KC GK +A +VF M
Sbjct: 409 --TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 221 VRD--LVSWNAILSGYINA-RRLEEAKF-------------------------------- 245
D L + I++ NA LE +F
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 246 ------IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+F + N++ W MIS + + E S+ LFN M S+G+ P + + A
Sbjct: 527 PEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
SL G+ +H ++LG S NALI MY KCG YA+ +F M + ++W
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITW 646
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
N MI HG + A+ L+++M K PD +TFL+++SAC+H+G V+EG++ F+ M
Sbjct: 647 NLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQ 706
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
YG+ P +HYA ++DLL RAG EA ++MP E + IW LL+ R H N+ELGI
Sbjct: 707 DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGI 766
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
+AE+L + PE+ TY+ L N+Y G +E A++ LM+E+G+ K+PGCSWIE+ +
Sbjct: 767 LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRT 826
Query: 540 HVFLVDDAVHPEVHAVYKYLEQLVIEM 566
+VF + P ++ L +L M
Sbjct: 827 NVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 219/521 (42%), Gaps = 114/521 (21%)
Query: 2 KRDGFAP---DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 58
K DG +P F+F ++L A S + + + +H VV G P + +L++ Y+
Sbjct: 49 KHDGSSPFWTSVFTFPSLLKACSALTNLSYG-KTIHGSVVVLGWRYDPFIATSLVNMYVK 107
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
C + A ++FD G+ ++ SAR +
Sbjct: 108 CG---------FLDYAVQVFD-----------------GWSQSQSGVSARDV-------- 133
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC--GRQL 176
WN+MI GY + ++E FR+M G++ D ++ + ++S G F G+Q+
Sbjct: 134 -TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQI 192
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H ++LR + ++ F+ ALI Y K G + A VF + + D
Sbjct: 193 HGFMLRNSLD-TDSFL---KTALIDMYFKFGLSIDAWRVF--VEIED------------- 233
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
+ N++ W VMI G SG E SL L+ K+ ++ ++ GA
Sbjct: 234 ---------------KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGA 278
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
+ AC + G+QIH V+++G + +L++MY+KCG+VG A+ VF +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF-- 414
WNAM+AA A++ G A+ L+ M ++ +LPD T ++S CS GL G+
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 415 -------------DSMCTHY---GMTPGEDHY--------------ARLIDLLCRAGKFS 444
++ T Y G P D Y LI LC+ GKF
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDP--DAYLVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 445 EAKKVTESM-----PFEPSAPIWESLLAGCRIHGNIELGIQ 480
EA KV M +P + I S+ C + G+Q
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ 497
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 259/477 (54%), Gaps = 28/477 (5%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVR----HGLYEEAFDTFRKMHSMGI-QMDEYTY 157
+L+ AR + D + P + A+++ Y H AF FR M + + + + + Y
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHA--SSAFSFFRLMVNRSVPRPNHFIY 129
Query: 158 ------TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI-TFYTKCGKLV 210
T +S++F+T L +H ++ ++ H + V AL+ ++ + +
Sbjct: 130 PLVLKSTPYLSSAFSTPL------VHTHLFKS----GFHLYVVVQTALLHSYASSVSHIT 179
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
AR++FD+M R++VSW A+LSGY + + A +F ++PER++ +W +++ ++G
Sbjct: 180 LARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGL 239
Query: 271 GEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
E++ LF +M +E + P + + AC G+L + IH+ + S + N
Sbjct: 240 FLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSN 299
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK---ED 386
+L+ +Y KCG + A VF +WN+MI A HGR +AI ++E+M+K D
Sbjct: 300 SLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
I PD ITF+ +L+AC+H GLV +G+ YFD M +G+ P +HY LIDLL RAG+F EA
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Query: 447 KKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHL 506
+V +M + IW SLL C+IHG+++L A + L L P G +++N+Y +
Sbjct: 420 LEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEM 479
Query: 507 GKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLV 563
G W+E R RK+++ + K PG S IEI+N VH F D HPE +Y L+ L+
Sbjct: 480 GNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 24/318 (7%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
P+ F + VL + ++ + +H + K G V LL Y S +
Sbjct: 124 PNHFIYPLVLKSTPYLSSA-FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL-- 180
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 127
AR+LFDE +S+++ SWT M++GY R+ D+++A L + M +WNA+++
Sbjct: 181 ------ARQLFDE--MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILA 232
Query: 128 GYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 186
++GL+ EA FR+M + I+ +E T ++SA TG + +HA+ R +
Sbjct: 233 ACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS 292
Query: 187 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 246
S+ F V+N+L+ Y KCG L +A VF + L +WN++++ + R EEA +
Sbjct: 293 -SDVF---VSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAV 348
Query: 247 FREVPERNL-------LTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIK 298
F E+ + N+ +T+ +++ G + F+ M + G+EP Y I
Sbjct: 349 FEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLID 408
Query: 299 ACGVLGSLDNGQQIHSQV 316
G G D ++ S +
Sbjct: 409 LLGRAGRFDEALEVMSTM 426
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 247/470 (52%), Gaps = 47/470 (10%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA 163
L A KL D + P N ++ G + E+ + +M G+ D YT+T ++ A
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 164 SFNTGLFNCGRQLHAYVLRTVVQPSEHFILS--VNNALITFYTKCG-------------- 207
+ G H V+R F+L+ V NALI F+ CG
Sbjct: 122 CSKLEWRSNGFAFHGKVVR------HGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 208 -----------------KLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
K+ +A +FD+MP +D V+WN +++G + + ++ A+ +F
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
E++++TW MISG G+ +E+L +F +M+ G P + AC VLG L+ G+
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGK 295
Query: 311 QIHSQVIQLGH-DSSLSAG----NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAA 365
++H +++ SS+ G NALI MYAKCG + A VF + D +WN +I
Sbjct: 296 RLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVG 355
Query: 366 LA-QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMT 424
LA H G +I+++E+M + + P+ +TF+ ++ ACSH+G V EG+ YF M Y +
Sbjct: 356 LALHHAEG--SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 413
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAER 484
P HY ++D+L RAG+ EA ESM EP+A +W +LL C+I+GN+ELG A E+
Sbjct: 414 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEK 473
Query: 485 LFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
L + ++ G Y++LSN+YA G+WD V +VRK+ + VKK G S IE
Sbjct: 474 LLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 200/476 (42%), Gaps = 97/476 (20%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ--QLHCDVVKWGVMCVPSVLNTLLSCYIC 58
M++ G +PD ++F+ VL A S + EW H VV+ G + V N L+ +
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKL---EWRSNGFAFHGKVVRHGFVLNEYVKNALILFHAN 159
Query: 59 CA----SSTLVESPVL------------------MASARKLFDEAPLSQKDEPSWTTMIA 96
C +S L + + A +LFDE P KD+ +W MI
Sbjct: 160 CGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY--KDQVAWNVMIT 217
Query: 97 GYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYT 156
G ++ ++ SAR+L D T V WNAMISGYV G +EA F++M G D T
Sbjct: 218 GCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT 277
Query: 157 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI-LSVNNALITFYTKCGKLVQAREV 215
SL+SA G G++LH Y+L T S ++ + NALI Y KCG + +A EV
Sbjct: 278 ILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEV 337
Query: 216 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 275
F + RDL +WN +I GLA E S+
Sbjct: 338 FRGVKDRDLSTWNT-------------------------------LIVGLALH-HAEGSI 365
Query: 276 KLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMY 335
++F +M+ + P + + G I AC G +D G++ S +
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM------------------- 406
Query: 336 AKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFL 395
DM + P + + M+ L + G+ +A E M I P+ I +
Sbjct: 407 --------RDM-YNIEPNIK--HYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWR 452
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
T+L AC G V+ G++ + + + G+ Y L ++ G++ +KV +
Sbjct: 453 TLLGACKIYGNVELGKYANEKLLSMRKDESGD--YVLLSNIYASTGQWDGVQKVRK 506
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 38/247 (15%)
Query: 310 QQIHSQVIQLGHDSSLSAGNALI--TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALA 367
+QIH+ ++ G S+LS LI + G + YA +F +P D N ++ A
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS-----------HAGLVKEG---QHY 413
Q + + + LY +M K + PDR TF +L ACS H +V+ G Y
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 414 -------FDSMCTHYGMT------PGEDH---YARLIDLLCRAGKFSEAKKVTESMPFEP 457
F + C G+ + H ++ + + GK EA ++ + MP++
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD 208
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVR 516
W ++ GC ++ +A LF+ E+D T+ + + Y + G E +
Sbjct: 209 QVA-WNVMITGCLKCKEMD----SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 517 KLMRERG 523
K MR+ G
Sbjct: 264 KEMRDAG 270
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 259/480 (53%), Gaps = 10/480 (2%)
Query: 86 KDEP--SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 143
++EP S T + + D+ A K L ++ P WN +I G+ E++ +
Sbjct: 38 EEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYI 97
Query: 144 KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
+M G+ D TY L+ +S G LH V+++ ++ + L + N LI Y
Sbjct: 98 QMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE----WDLFICNTLIHMY 153
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
AR++FD+MP ++LV+WN+IL Y + + A+ +F E+ ER+++TW+ MI
Sbjct: 154 GSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMID 213
Query: 264 GLAESGFGEESLKLFNQMKSEGLEPCD-YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
G + G ++L++F+QM G + I AC LG+L+ G+ +H ++ +
Sbjct: 214 GYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLP 273
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFL--TMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
++ +LI MYAKCG +G A VF ++ D++ WNA+I LA HG +++QL+
Sbjct: 274 LTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFH 333
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
+M + I PD ITFL +L+ACSH GLVKE H+F S+ G P +HYA ++D+L RA
Sbjct: 334 KMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRA 392
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILS 500
G +A MP +P+ + +LL GC HGN+EL ++L EL P DG Y+ L+
Sbjct: 393 GLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLA 452
Query: 501 NMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLE 560
N+YA ++ +R+ M ++GVKK G S ++++ H F+ D H +Y L+
Sbjct: 453 NVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ 512
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 158/325 (48%), Gaps = 27/325 (8%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M R G PD ++ ++ + S ++ + LHC VVK G+ + NTL+ Y
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKL-GGSLHCSVVKSGLEWDLFICNTLIHMY---- 153
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S ASARKLFDE P K+ +W +++ Y ++ D+ SAR + D M+ V
Sbjct: 154 -----GSFRDQASARKLFDEMP--HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
W++MI GYV+ G Y +A + F +M MG + +E T S+I A + G N G+ +H Y
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 180 VLRTVVQPSEHFILSV--NNALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILSGYI 235
+L H L+V +LI Y KCG + A VF + V+ D + WNAI+ G
Sbjct: 267 ILDV------HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 236 NARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+ + E+ +F ++ E + +T+ +++ + G +E+ F +K G EP
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSE 380
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQV 316
YA + G + + S++
Sbjct: 381 HYACMVDVLSRAGLVKDAHDFISEM 405
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 252/475 (53%), Gaps = 7/475 (1%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I+ Y R ++ AR+L D M AV+WNA+I+ Y G++ EAF+ F KM G++
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYV--LRTVVQPSEHFILSVNNALITFYTKCGKL 209
+ T+ + TG + L + + T + P I+ + + + GK
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVA-MIIGLKACSLIGAIRLGKE 301
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
+ + D V N +++ Y + L A +FR+ E +L TW +ISG A+
Sbjct: 302 IHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLN 360
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG--HDSSLSA 327
EE+ L +M G +P A + C + +L +G++ H +++ D ++
Sbjct: 361 KSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM-L 419
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
N+L+ +YAK G + A V M D V++ ++I G G A+ L+++M + I
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
PD +T + +LSACSH+ LV EG+ F M YG+ P H++ ++DL RAG ++AK
Sbjct: 480 KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAK 539
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLG 507
+ +MP++PS W +LL C IHGN ++G AAE+L E+ PE G Y++++NMYA G
Sbjct: 540 DIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAG 599
Query: 508 KWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
W ++A VR +MR+ GVKK+PGC+WI+ ++ +F V D PE Y L+ L
Sbjct: 600 SWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGL 654
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 180/346 (52%), Gaps = 14/346 (4%)
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
+ HP+ WN +I+ Y ++ L+EE +++M S GI+ D +TY S++ A T G
Sbjct: 106 ILHPLP--WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
R +H + + + S L V NALI+ Y + + AR +FD+M RD VSWNA+++
Sbjct: 164 RVVHGSIEVSSYKSS----LYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC 219
Query: 234 YINARRLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQMKS--EGLE 287
Y + EA +F ++ E +++TW ++ G ++G +L L ++M++ L+
Sbjct: 220 YASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLD 279
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P A +KAC ++G++ G++IH I +D + N LITMY+KC + +A +V
Sbjct: 280 PV--AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIV 337
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F +WN++I+ AQ + +A L +ML P+ IT +IL C+ +
Sbjct: 338 FRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANL 397
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
+ G+ + + + L+D+ ++GK AK+V++ M
Sbjct: 398 QHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 132 HGLYEEAFDTFR--KMHSMGIQMDE---YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 186
HG +AF TF ++ S D+ ++ SL+SA + F G Q+HA+ + + V+
Sbjct: 16 HGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVE 75
Query: 187 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 246
H +L L+TFY+ +A+ + E I
Sbjct: 76 --YHSVLVPK--LVTFYSAFNLHNEAQSII-------------------------ENSDI 106
Query: 247 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSL 306
+P W V+I+ A++ EE + + +M S+G+ P + Y +KACG +
Sbjct: 107 LHPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 160
Query: 307 DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAAL 366
G+ +H + + SSL NALI+MY + +G A +F M D+VSWNA+I
Sbjct: 161 AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY 220
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
A G +A +L+++M + IT+ I C G
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 99/235 (42%), Gaps = 56/235 (23%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
GF P+ + +++L + IA + H ++ HC +++
Sbjct: 376 GFQPNSITLASILPLCARIANLQ-HGKEFHCYILR------------------------- 409
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA 124
RK F + + W +++ Y ++ + +A+++ D M+ V + +
Sbjct: 410 ----------RKCFKDYTML------WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTS 453
Query: 125 MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH-----AY 179
+I GY G A F++M GI+ D T +++SA ++ L + G +L Y
Sbjct: 454 LIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEY 513
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILSG 233
+R +Q HF + ++ Y + G L +A+++ MP + +W +L+
Sbjct: 514 GIRPCLQ---HF-----SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 247/486 (50%), Gaps = 44/486 (9%)
Query: 93 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 152
++I Y + + ARKL D +T V+WN+MISGY G ++A D FRKM G +
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 153 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 212
DE T S++ A + G GR L + + S + + LI+ Y KCG L A
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF----LGSKLISMYGKCGDLDSA 287
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
R VF++M +++ + WT MI+ +++G
Sbjct: 288 RRVFNQMI-------------------------------KKDRVAWTAMITVYSQNGKSS 316
Query: 273 ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
E+ KLF +M+ G+ P + + ACG +G+L+ G+QI + +L ++ L+
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
MY KCG V A VF MP + +WNAMI A A G +A+ L+++M + P I
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDI 433
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
TF+ +LSAC HAGLV +G YF M + +G+ P +HY +IDLL RAG EA + E
Sbjct: 434 TFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 493
Query: 453 MPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDE 511
P +P + ++L C ++ + +A L E+ ++ G Y+I SN+ A + WDE
Sbjct: 494 FPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDE 553
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLV-DDAVHPEVHAVYKYLEQLVIEMRK-- 568
A++R LMR+RGV K PGCSWIEIE + FL D + + LV EM++
Sbjct: 554 SAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRER 613
Query: 569 --LGYI 572
GYI
Sbjct: 614 YEFGYI 619
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 206/445 (46%), Gaps = 42/445 (9%)
Query: 64 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 123
L++ + + R++ + L ++P++ +I V D + L P ++N
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNF--LIPKAVELGDFNYSSFLFSVTEEPNHYSFN 100
Query: 124 AMISGYVRH-GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
MI G +E A +R+M G++ D++TY + A GR +H+ + +
Sbjct: 101 YMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFK 160
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 242
++ H +N++LI Y KCG++ AR++FD
Sbjct: 161 VGLERDVH----INHSLIMMYAKCGQVGYARKLFD------------------------- 191
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
E+ ER+ ++W MISG +E+G+ ++++ LF +M+ EG EP + + AC
Sbjct: 192 ------EITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
LG L G+ + I S G+ LI+MY KCG + A VF M D V+W AM
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
I +Q+G+ +A +L+ +M K + PD T T+LSAC G ++ G+ ++ +
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELS 364
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
+ L+D+ + G+ EA +V E+MP + A W +++ G+ + +
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAMITAYAHQGHAKEALLLF 423
Query: 483 ERLFELTPEQDGTYIILSNMYAHLG 507
+R+ P D T+I + + H G
Sbjct: 424 DRM--SVPPSDITFIGVLSACVHAG 446
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 242/470 (51%), Gaps = 36/470 (7%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y R L SAR++ D + P +WN +I+G +G +EA F +M S G D +
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
SL+ A + G Q+H+Y+++ L+V N+L+T YT C L +F+
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLAD----LTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 218 KMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D VSWN IL+ + E P E L+
Sbjct: 431 DFRNNADSVSWNTILTACLQ-----------HEQPV--------------------EMLR 459
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
LF M EP ++ C + SL G Q+H ++ G N LI MYA
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
KCG +G A +F +M D VSW+ +I AQ G G +A+ L+++M I P+ +TF+
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
+L+ACSH GLV+EG + +M T +G++P ++H + ++DLL RAG+ +EA++ + M E
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 457 PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVR 516
P +W++LL+ C+ GN+ L +AAE + ++ P +++L +M+A G W+ A +R
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699
Query: 517 KLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEM 566
M++ VKK PG SWIEIE+ +H+F +D HPE +Y L + +M
Sbjct: 700 SSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 209/468 (44%), Gaps = 69/468 (14%)
Query: 49 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLAS 106
L T +S C+SS +A RK+ D S + D +++ Y + L
Sbjct: 67 LRTYISLICACSSSRS------LAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
AR++ D M V++ ++I+GY ++G EA + KM + D++ + S+I A +
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
+ G+QLHA V++ ++ S H L++
Sbjct: 181 SSDVGLGKQLHAQVIK--LESSSH---------------------------------LIA 205
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL 286
NA+++ Y+ ++ +A +F +P ++L++W+ +I+G ++ GF E+L +M S G+
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 287 -EPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
P +Y + ++KAC L D G QIH I+ + AG +L MYA+CG + A
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
VF + D+ SWN +IA LA +G +A+ ++ QM +PD I+ ++L A +
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 406 LVKEGQHYFDSMCTHYGMTPG-------EDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
+ +G S +G Y DL C F + + +S+
Sbjct: 386 ALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS---- 440
Query: 459 APIWESLLAGCRIHGNIELGIQAAE--RLFE--LTPEQDGTYIILSNM 502
W ++L C H Q E RLF+ L E + +I + N+
Sbjct: 441 ---WNTILTACLQHE------QPVEMLRLFKLMLVSECEPDHITMGNL 479
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 42/348 (12%)
Query: 127 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 186
S + R L EAFD +K S I++ TY SLI A ++ GR++H ++L + +
Sbjct: 44 SNFYREAL--EAFDFAQKNSSFKIRL--RTYISLICACSSSRSLAQGRKIHDHILNSNCK 99
Query: 187 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 246
+ +NN +++ Y KCG L +A+ +
Sbjct: 100 ----YDTILNNHILSMYGKCGSL-------------------------------RDAREV 124
Query: 247 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSL 306
F +PERNL+++T +I+G +++G G E+++L+ +M E L P +A+ IKAC +
Sbjct: 125 FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 307 DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAAL 366
G+Q+H+QVI+L S L A NALI MY + + A VF +P D +SW+++IA
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 367 AQHGRGVQAIQLYEQMLKEDIL-PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
+Q G +A+ ++ML + P+ F + L ACS G +C +
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQ-IHGLCIKSELAG 303
Query: 426 GEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
L D+ R G + A++V + + P W ++AG +G
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNG 350
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 262 ISGLAESGFGEESLKLFN-QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
I+ L +S F E+L+ F+ K+ + Y I AC SL G++IH ++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
N +++MY KCG + A VF MP + VS+ ++I +Q+G+G +AI+LY
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
+ML+ED++PD+ F +I+ AC+ + V G+ + + A LI + R
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNA-LIAMYVRF 216
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ S+A +V +P + W S++AG
Sbjct: 217 NQMSDASRVFYGIPMKDLIS-WSSIIAG 243
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 138/353 (39%), Gaps = 82/353 (23%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI--- 57
M+ GF PD S ++L A + Q+H ++KWG + +V N+LL+ Y
Sbjct: 362 MRSSGFIPDAISLRSLLCAQTKPMALS-QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 58 ---CCAS--------------STLV------ESPVLMASARKLFDEAPLSQKDEPSWTTM 94
CC + +T++ E PV M KL L + EP TM
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM----LVSECEPDHITM 476
Query: 95 --------------------------------------IAGYVRNDDLASARKLLDGMTH 116
I Y + L AR++ D M +
Sbjct: 477 GNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDN 536
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
V+W+ +I GY + G EEA F++M S GI+ + T+ +++A + GL G +L
Sbjct: 537 RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKL 596
Query: 177 HAYVLRTVVQPSEHFILSVN---NALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAILS 232
+A +EH I + ++ + G+L +A D+M + D+V W +LS
Sbjct: 597 YA------TMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLS 650
Query: 233 GYI---NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
N ++A ++ N ++ S A SG E + L + MK
Sbjct: 651 ACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMK 703
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 237/448 (52%), Gaps = 38/448 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHP-IAVAWNAMISGYVRHGLYEEAFDTFRKM 145
D ++++ Y + + L+ A KL ++ AWN M+ GY + + + + FRK+
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
++GI++D + TS+IS+ + G G+ LH YV++T S +SV N+LI Y K
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT----SLDLTISVVNSLIDLYGK 480
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
G L V+W R EA + N++TW MI+
Sbjct: 481 MGDLT--------------VAW----------RMFCEA--------DTNVITWNAMIASY 508
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
E+++ LF++M SE +P + AC GSL+ GQ IH + + H+ +L
Sbjct: 509 VHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNL 568
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
S ALI MYAKCG + + +F D+V WN MI+ HG AI L++QM +
Sbjct: 569 SLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEES 628
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
D+ P TFL +LSAC+HAGLV++G+ F M Y + P HY+ L+DLL R+G E
Sbjct: 629 DVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEE 687
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAH 505
A+ SMPF P IW +LL+ C HG E+GI+ AER P+ DG YI+L+NMY+
Sbjct: 688 AESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSA 747
Query: 506 LGKWDEVARVRKLMRERGVKKEPGCSWI 533
GKW+E R R++MRE GV K G S +
Sbjct: 748 AGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 39/318 (12%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + L A + D M VAW A+ISG+V++G E KMHS G +D+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 158 TSL---ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 214
+L A N G GR LH + ++ + S+ V +++ +FY+K G +A
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF----VQSSMFSFYSKSGNPSEAYL 286
Query: 215 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 274
F ++ D+ SW +I I+ LA SG EES
Sbjct: 287 SFRELGDEDMFSWTSI-------------------------------IASLARSGDMEES 315
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
+F +M+++G+ P + I G + + G+ H VI+ + N+L++M
Sbjct: 316 FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSM 375
Query: 335 YAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
Y K ++ A+ +F + + +WN M+ + V+ I+L+ ++ I D +
Sbjct: 376 YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSAS 435
Query: 394 FLTILSACSHAGLVKEGQ 411
+++S+CSH G V G+
Sbjct: 436 ATSVISSCSHIGAVLLGK 453
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 38/350 (10%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
WN++I + +G Y + F M G D +T ++SA F+ G +H VL
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+ +V + + FY+KCG L+
Sbjct: 153 K---HGGFDRNTAVGASFVYFYSKCG-------------------------------FLQ 178
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE---PCDYAYAGAIK 298
+A +F E+P+R+++ WT +ISG ++G E L +M S G + P +
Sbjct: 179 DACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQ 238
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
AC LG+L G+ +H ++ G SS +++ + Y+K G A + F + D S
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
W ++IA+LA+ G ++ ++ +M + + PD + +++ LV +G+ F
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK-AFHGFV 357
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ + L+ + C+ S A+K+ + E + W ++L G
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKG 407
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 249/462 (53%), Gaps = 6/462 (1%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSMGIQMDEYTYTSL 160
D+ A + + H WN +I G+ R E A F M S ++ TY S+
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 220
A G GRQLH V++ ++ + FI N ++ Y CG L++A +F M
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLE-DDSFI---RNTMLHMYVTCGCLIEAWRIFLGMI 188
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
D+V+WN+++ G+ +++A+ +F E+P+RN ++W MISG +G +++L +F +
Sbjct: 189 GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE 248
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
M+ + ++P + + AC LG+ + G+ IH +++ + + ALI MY KCG
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ VF P WN+MI LA +G +A+ L+ ++ + + PD ++F+ +L+A
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
C+H+G V +F M Y + P HY ++++L AG EA+ + ++MP E
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
IW SLL+ CR GN+E+ +AA+ L +L P++ Y++LSN YA G ++E R LM+
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 488
Query: 521 ERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
ER ++KE GCS IE++ VH F+ HP+ +Y L+ L
Sbjct: 489 ERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 52/406 (12%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
P ++ +V A + + +QLH V+K G+ + NT+L Y+ C L+E
Sbjct: 124 PQRLTYPSVFKAYGRLGQAR-DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCG--CLIE- 179
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMIS 127
A ++F + D +W +MI G+ + + A+ L D M V+WN+MIS
Sbjct: 180 ------AWRIF--LGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMIS 231
Query: 128 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
G+VR+G +++A D FR+M ++ D +T SL++A G GR +H Y++R +
Sbjct: 232 GFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL 291
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 247
+ + ALI Y KCG + + VF+ P + L WN+
Sbjct: 292 NSIVV----TALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS------------------ 329
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLD 307
MI GLA +GF E ++ LF++++ GLEP ++ G + AC G +
Sbjct: 330 -------------MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 308 NGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMIAA 365
+ + + + S+ ++ + G++ A+ + MP D+V W+++++A
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS-ACSHAGLVKEG 410
+ G A + + + K D PD +LS A + GL +E
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLD--PDETCGYVLLSNAYASYGLFEEA 480
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 310 QQIHSQVIQLGHDS-SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQ 368
+QIH+ +I+ G S +++A L A + YA +VF + + + WN +I ++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 369 HGRGVQAIQLYEQML--KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPG 426
AI ++ ML + P R+T+ ++ A G ++G+ M G+
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ-LHGMVIKEGLE-- 158
Query: 427 EDHYAR--LIDLLCRAGKFSEAKKVTESM-PFEPSAPIWESLLAGCRIHGNIELGIQAAE 483
+D + R ++ + G EA ++ M F+ A W S++ G G I+ A+
Sbjct: 159 DDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA--WNSMIMGFAKCGLID----QAQ 212
Query: 484 RLFELTPEQDG-TYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
LF+ P+++G ++ + + + G++ + + + M+E+ VK +
Sbjct: 213 NLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 259/484 (53%), Gaps = 3/484 (0%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+D +I+ Y R D ++A M+ ++WNA++ + + + +
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHL 423
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
+ I +D T SL+ N +++H Y ++ + E + NAL+ Y K
Sbjct: 424 LNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEP-KLGNALLDAYAK 482
Query: 206 CGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
CG + A ++F + R LVS+N++LSGY+N+ ++A+ +F E+ +L TW++M+
Sbjct: 483 CGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRI 542
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
AES E++ +F ++++ G+ P + C L SL +Q H +I+ G
Sbjct: 543 YAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR-GGLGD 601
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
+ L+ +YAKCG + +A VF + D V + AM+A A HGRG +A+ +Y M +
Sbjct: 602 IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
+I PD + T+L+AC HAGL+++G +DS+ T +GM P + YA +DL+ R G+
Sbjct: 662 SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLD 721
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYA 504
+A MP EP+A IW +LL C + ++LG A L + + G ++++SNMYA
Sbjct: 722 DAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYA 781
Query: 505 HLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVI 564
KW+ V +R LM+++ +KK GCSW+E++ +VF+ D HP +++ + L +
Sbjct: 782 ADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYL 841
Query: 565 EMRK 568
+M++
Sbjct: 842 QMKE 845
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 197/433 (45%), Gaps = 58/433 (13%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL--ISAS 164
A DG+ V+WNA+I+G+ + + +AF +F M + + T ++ + AS
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 165 FNTGLF-NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD 223
+ + GRQ+H+YV++ + F+ N+L++FY + G
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVC---NSLVSFYLRVG---------------- 277
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
R+EEA +F + ++L++W V+I+G A + ++ +LF+ +
Sbjct: 278 ---------------RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 284 EG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ---LGHDSSLSAGNALITMYAKCG 339
+G + P + C L L +G++IHS +++ L D+S+ GNALI+ YA+ G
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV--GNALISFYARFG 380
Query: 340 VVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
A F M D +SWNA++ A A + Q + L +L E I D +T L++L
Sbjct: 381 DTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLK 440
Query: 400 ACSHA---GLVKEGQHYFDSMCTHYGMTPGEDHYA---RLIDLLCRAGKFSEAKKVTESM 453
C + G VKE Y G+ E+ L+D + G A K+ +
Sbjct: 441 FCINVQGIGKVKEVHGY----SVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGL 496
Query: 454 PFEPSAPIWESLLAGCRIHGNIELGIQAAERLF-ELTPEQDGTYIILSNMYAHLGKWDEV 512
+ + SLL+G G+ + A+ LF E++ T+ ++ +YA +E
Sbjct: 497 SERRTLVSYNSLLSGYVNSGSHD----DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEA 552
Query: 513 ARVRKLMRERGVK 525
V + ++ RG++
Sbjct: 553 IGVFREIQARGMR 565
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 181/430 (42%), Gaps = 49/430 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGI 150
++++ Y+R + A L M V+WN +I+GY + + +AF F + H +
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL---SVNNALITFYTKCG 207
D T S++ G+++H+Y+LR ++L SV NALI+FY + G
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILR------HSYLLEDTSVGNALISFYARFG 380
Query: 208 KLVQAREVFDKMPVRDLVSWNAILSGYINARR----------LEEAKFIFREVPERNLLT 257
A F M +D++SWNAIL + ++ + L V +LL
Sbjct: 381 DTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLK 440
Query: 258 WTVMISGLAE----SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
+ + + G+ + G+ ++ L ++ + + AYA CG N + H
Sbjct: 441 FCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA----KCG------NVEYAH 490
Query: 314 SQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV 373
+ L +L + N+L++ Y G A M+F M D +W+ M+ A+
Sbjct: 491 KIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPN 550
Query: 374 QAIQLYEQMLKEDILPDRITFLTILSACSHAG---LVKEGQHYFDSMCTHYGMTPGEDHY 430
+AI ++ ++ + P+ +T + +L C+ LV++ C Y + G
Sbjct: 551 EAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQ--------CHGYIIRGGLGDI 602
Query: 431 ---ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
L+D+ + G A V +S ++ +++AG +HG + + + E
Sbjct: 603 RLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 488 LTPEQDGTYI 497
+ D +I
Sbjct: 662 SNIKPDHVFI 671
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 97/177 (54%), Gaps = 5/177 (2%)
Query: 229 AILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK-SEGLE 287
++L+ Y RR+++ + +FR++ + + W ++++GL+ S G E+++ F M ++ +
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPK 119
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD-- 345
P +A + C LG NG+ +HS +I+ G + GNAL++MYAK G + + D
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI-FPDAY 178
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
F + D VSWNA+IA +++ A + + MLKE P+ T +L C+
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
+ +KAC + L +G+ +H V +LGH + +++ MYAKC + +F M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILSACSHAGLVKEGQ 411
+D V WN ++ L+ G + ++ ++ M ++ P +TF +L C G G+
Sbjct: 84 SLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGK 142
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 243/481 (50%), Gaps = 68/481 (14%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQ 175
P WN +I GY L+ E +M G+ + DEYT+ ++ N G G
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
+H VLR + V + + FY KC L AR+VF +MP R+ VSW A++ Y+
Sbjct: 132 VHGLVLRIGFDKD----VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYV 187
Query: 236 NARRLEEAKF-------------------------------IFREVPERNLLTWTVMISG 264
+ LEEAK +F E+P+R+++++T MI G
Sbjct: 188 KSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDG 247
Query: 265 LAESG--------FGE-----------------------ESLKLFNQMKSEGLEPCDYAY 293
A+ G F E E+ K+F++M ++ ++P ++
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
G + AC +G + +++ S + Q + SS ALI M AKCG + A +F MP
Sbjct: 308 VGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
D VS+ +M+ +A HG G +AI+L+E+M+ E I+PD + F IL C + LV+EG
Sbjct: 368 QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLR 427
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
YF+ M Y + DHY+ +++LL R GK EA ++ +SMPFE A W SLL GC +H
Sbjct: 428 YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLH 487
Query: 473 GNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSW 532
GN E+ A LFEL P+ G+Y++LSN+YA L +W +VA +R M E G+ K G SW
Sbjct: 488 GNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSW 547
Query: 533 I 533
I
Sbjct: 548 I 548
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 155/303 (51%), Gaps = 40/303 (13%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
+ +A+KLFDE P ++D S+T+MI GY + D+ SAR L + AW+A+I GY
Sbjct: 223 LVNAKKLFDEMP--KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
++G EAF F +M + ++ DE+ L+SA G F ++ +Y+ + + + S H
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH 340
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
+++ ALI KCG + +A ++F++MP RDLVS+ +
Sbjct: 341 YVVP---ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCS--------------------- 376
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
M+ G+A G G E+++LF +M EG+ P + A+ +K CG ++ G
Sbjct: 377 ----------MMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGL 426
Query: 311 QIHSQVIQLGHD--SSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSVSWNAMIAALA 367
+ + ++++ + +S + ++ + ++ G + A + +MP+ + +W +++ +
Sbjct: 427 R-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCS 485
Query: 368 QHG 370
HG
Sbjct: 486 LHG 488
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 124/311 (39%), Gaps = 40/311 (12%)
Query: 246 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL-EPCDYAYAGAIKACGVLG 304
+F VP W +I G + E++ + +M GL P +Y + +K C G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
+ G +H V+++G D + G + + Y KC + A VF MP ++VSW A++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRI--TFLTILSACSHAGLVKEGQHYFDSMCTH-- 420
A + G +A ++ D++P+R ++ ++ +G + + FD M
Sbjct: 185 AYVKSGELEEAKSMF------DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKV-------------TESMPFE----------- 456
T D YA+ D++ F EA+ V P E
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 457 ---PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYII--LSNMYAHLGKWDE 511
P I L++ C G EL + L + + Y++ L +M A G D
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 512 VARVRKLMRER 522
A++ + M +R
Sbjct: 359 AAKLFEEMPQR 369
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 240/454 (52%), Gaps = 35/454 (7%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
Q +E + +++ R+ D+ + R++ + P AWNAM+SGY + YEEA FR+
Sbjct: 347 QPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
M ++ D+ T + ++S+ G+Q+H V+RT + + H + + LI Y+
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV----SGLIAVYS 462
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
+C K+ + +FD + E ++ W MISG
Sbjct: 463 ECEKMEISECIFDDC------------------------------INELDIACWNSMISG 492
Query: 265 LAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
+ ++L LF +M ++ L P + ++A + +C L SL +G+Q H V++ G+ S
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
AL MY KCG + A F + ++V WN MI +GRG +A+ LY +M+
Sbjct: 553 DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI 612
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
PD ITF+++L+ACSH+GLV+ G SM +G+ P DHY ++D L RAG+
Sbjct: 613 SSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRL 672
Query: 444 SEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMY 503
+A+K+ E+ P++ S+ +WE LL+ CR+HG++ L + AE+L L P+ Y++LSN Y
Sbjct: 673 EDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Query: 504 AHLGKWDEVARVRKLMRERGVKKEPGCSWIEIEN 537
+ L +WD+ A ++ LM + V K PG SW N
Sbjct: 733 SSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 181/388 (46%), Gaps = 42/388 (10%)
Query: 33 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 92
+H +V+ G+ + N LL YI C ARK+FDE +S +D SW
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDY---------ARKVFDE--MSVRDVYSWN 76
Query: 93 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 152
+ + DL A ++ DGM V+WN MIS VR G E+A +++M G
Sbjct: 77 AFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP 136
Query: 153 DEYTYTSLISASFNT--GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+T S++SA G+F G + H ++T + + + V NAL++ Y KCG +V
Sbjct: 137 SRFTLASVLSACSKVLDGVF--GMRCHGVAVKTGLDKN----IFVGNALLSMYAKCGFIV 190
Query: 211 Q-AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
VF+ + + VS+ A++ G ++ EA +FR + E+ + +V +S +
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI---- 246
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
L EG + Y + G+QIH ++LG L N
Sbjct: 247 -------LSISAPREGCDSLSEIYGNEL-----------GKQIHCLALRLGFGGDLHLNN 288
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
+L+ +YAK + A+++F MP V+ VSWN MI Q R ++++ +M P
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSM 417
+ +T +++L AC +G V+ G+ F S+
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 128/228 (56%), Gaps = 5/228 (2%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
G+ +H +++R ++ + N L+ Y +CG AR+VFD+M VRD+ SWNA L+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLC----NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLT 80
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
L EA +F +PER++++W MIS L GF E++L ++ +M +G P +
Sbjct: 81 FRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFT 140
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG-VVGYADMVFLTM 351
A + AC + G + H ++ G D ++ GNAL++MYAKCG +V Y VF ++
Sbjct: 141 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
+ VS+ A+I LA+ + ++A+Q++ M ++ + D + ILS
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 179/479 (37%), Gaps = 128/479 (26%)
Query: 4 DGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASST 63
DGF P F+ ++VL A S + + + + H VK G+ V N LLS Y C
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFG-MRCHGVAVKTGLDKNIFVGNALLSMYAKCG--- 187
Query: 64 LVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN 123
I Y ++ + ++ P V++
Sbjct: 188 ------------------------------FIVDY--------GVRVFESLSQPNEVSYT 209
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS------------FNTGLFN 171
A+I G R EA FR M G+Q+D ++++S S + L
Sbjct: 210 AVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL-- 267
Query: 172 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 231
G+Q+H LR H +NN+L+ Y K N +
Sbjct: 268 -GKQIHCLALRLGFGGDLH----LNNSLLEIYAK----------------------NKDM 300
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+G A+ IF E+PE N+++W +MI G + ++S++ +M+ G +P +
Sbjct: 301 NG---------AELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEV 351
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
+ AC G ++ G++I S + Q S+SA
Sbjct: 352 TCISVLGACFRSGDVETGRRIFSSIPQ----PSVSA------------------------ 383
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
WNAM++ + + +AI + QM +++ PD+ T ILS+C+ + EG
Sbjct: 384 -------WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL-EGG 435
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCR 470
+ ++ + LI + K ++ + + E W S+++G R
Sbjct: 436 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFR 494
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 246/441 (55%), Gaps = 8/441 (1%)
Query: 95 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 154
I G + N D A+ ++ + +P + +NAMI Y G E+ F M S GI DE
Sbjct: 45 ICGSLSNSDYAN--RVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADE 102
Query: 155 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 214
YTY L+ + + G+ +H ++RT H + + ++ YT G++ A++
Sbjct: 103 YTYAPLLKSCSSLSDLRFGKCVHGELIRTGF----HRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 215 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 274
VFD+M R++V WN ++ G+ ++ +E +F+++ ER++++W MIS L++ G E+
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG-HDSSLSAGNALIT 333
L+LF +M +G +P + + LG LD G+ IHS G ++ GNAL+
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRI 392
Y K G + A +F M + VSWN +I+ A +G+G I L++ M++E + P+
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
TFL +L+ CS+ G V+ G+ F M + + +HY ++DL+ R+G+ +EA K ++
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 453 MPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEV 512
MP +A +W SLL+ CR HG+++L AA L ++ P G Y++LSN+YA G+W +V
Sbjct: 399 MPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 513 ARVRKLMRERGVKKEPGCSWI 533
+VR LM++ ++K G S I
Sbjct: 459 EKVRTLMKKNRLRKSTGQSTI 479
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 170/375 (45%), Gaps = 53/375 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
MK G D ++++ +L + S +++ + + +H ++++ G + + ++ Y
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFG-KCVHGELIRTGFHRLGKIRIGVVELYT--- 148
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S M A+K+FDE +S+++ W MI G+ + D+ L M+ V
Sbjct: 149 ------SGGRMGDAQKVFDE--MSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+WN+MIS + G EA + F +M G DE T +++ S + G+ + G+ +H
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH--- 257
Query: 181 LRTVVQPSEHF--ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
+ + S F ++V NAL+ FY K G L A +F KM R++VSWN
Sbjct: 258 --STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN---------- 305
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAI 297
+ISG A +G GE + LF+ M EG + P + + G +
Sbjct: 306 ---------------------TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 298 KACGVLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VD 355
C G ++ G+++ +++ ++ A++ + ++ G + A MP +
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 356 SVSWNAMIAALAQHG 370
+ W ++++A HG
Sbjct: 405 AAMWGSLLSACRSHG 419
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 238/442 (53%), Gaps = 35/442 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++ Y + L + KL G+ W +MISG+ +G EA F +M G
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
DE T ++++ + G+++H Y LR + + + +AL+ Y+KCG L
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG----MDLGSALVNMYSKCGSLKL 604
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
AR+V+D++P D VS ++++SGY +++ +FR+ + SGF
Sbjct: 605 ARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRD---------------MVMSGFT 649
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
+S +A + +KA + G Q+H+ + ++G + S G++L
Sbjct: 650 MDS----------------FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSL 693
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+TMY+K G + F + D ++W A+IA+ AQHG+ +A+Q+Y M ++ PD+
Sbjct: 694 LTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDK 753
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+TF+ +LSACSH GLV+E + +SM YG+ P HY ++D L R+G+ EA+
Sbjct: 754 VTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFIN 813
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
+M +P A +W +LLA C+IHG +ELG AA++ EL P G YI LSN+ A +G+WDE
Sbjct: 814 NMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDE 873
Query: 512 VARVRKLMRERGVKKEPGCSWI 533
V RKLM+ GV+KEPG S +
Sbjct: 874 VEETRKLMKGTGVQKEPGWSSV 895
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/520 (22%), Positives = 216/520 (41%), Gaps = 77/520 (14%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + +A A ++ + +P V+W M+SGY + A + F++M G++
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--------------------VVQPSEHF 191
++ T TS+ISA + Q+HA+V ++ + SE
Sbjct: 349 INNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQV 408
Query: 192 ILSVN--------NALITFYTKCGKLVQAREVFDKMP----------------------- 220
++ N +IT +++ K +A +F +M
Sbjct: 409 FEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL 468
Query: 221 -------------VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE 267
V DL +++ + Y LEE+ +F+ +P ++ W MISG E
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
G+ E++ LF++M +G P + A + C SL G++IH ++ G D +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
G+AL+ MY+KCG + A V+ +P +D VS +++I+ +QHG L+ M+
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
D +IL A + + G + T G+ + L+ + + G +
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQ-VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHL 506
K + P W +L+A HG +Q + E + D T++ + + +H
Sbjct: 708 KAFSQIN-GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHG 766
Query: 507 GKWDE-VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVD 545
G +E + ++++ G IE EN +V +VD
Sbjct: 767 GLVEESYFHLNSMVKDYG---------IEPENRHYVCMVD 797
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 192/420 (45%), Gaps = 50/420 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ +I + +N A K+ WN +I+G +R+ Y FD F +M +G Q
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CVGFQ 247
Query: 152 M-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
D YTY+S+++A + G+ + A V++ + + V A++ Y KCG +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED-----VFVCTAIVDLYAKCGHMA 302
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+A EV F +P ++++WTVM+SG +S
Sbjct: 303 EAMEV-------------------------------FSRIPNPSVVSWTVMLSGYTKSND 331
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH--DSSLSAG 328
+L++F +M+ G+E + I ACG + Q+H+ V + G DSS++A
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA- 390
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSW-NAMIAALAQHGRGVQAIQLYEQMLKEDI 387
ALI+MY+K G + ++ VF + + + N MI + +Q + +AI+L+ +ML+E +
Sbjct: 391 -ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
D + ++LS L K+ Y +T G + L L + G E+
Sbjct: 450 RTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG----SSLFTLYSKCGSLEESY 505
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAH 505
K+ + +PF+ +A W S+++G +G + I + + +P++ +L+ +H
Sbjct: 506 KLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 161/363 (44%), Gaps = 41/363 (11%)
Query: 93 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 152
++++ Y + +A A KL D + P V+ N MISGY +H L+EE+ F KMH +G +
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 153 DEYTYTSLISA--SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+E +Y S+ISA + LF+ V ++ F V +ALI ++K +
Sbjct: 149 NEISYGSVISACSALQAPLFS------ELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A +VF ++ WN I++G A R + +F
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAG---ALRNQNYGAVF----------------------- 236
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
LF++M +P Y Y+ + AC L L G+ + ++VI+ G + A
Sbjct: 237 -----DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-TA 290
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
++ +YAKCG + A VF +P VSW M++ + A++++++M + +
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEIN 350
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
T +++SAC +V E + G A LI + ++G +++V
Sbjct: 351 NCTVTSVISACGRPSMVCEASQ-VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF 409
Query: 451 ESM 453
E +
Sbjct: 410 EDL 412
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 216 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 275
FD + L+SW Y N+ + +A +F +P+ ++++ +MISG + EESL
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 276 KLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMY 335
+ F++M G E + +Y I AC L + + + I++G+ +ALI ++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 336 AKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFL 395
+K A VF + WN +IA ++ L+ +M PD T+
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY--ARLIDLLCRAGKFSEAKKVTESM 453
++L+AC+ ++ G+ + G ED + ++DL + G +EA +V +
Sbjct: 256 SVLAACASLEKLRFGK-VVQARVIKCG---AEDVFVCTAIVDLYAKCGHMAEAMEVFSRI 311
Query: 454 PFEPSAPIWESLLAG 468
P PS W +L+G
Sbjct: 312 P-NPSVVSWTVMLSG 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 120/301 (39%), Gaps = 70/301 (23%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYI--- 57
M GF D F+ S++L A +L ++E Q+H + K G+ PSV ++LL+ Y
Sbjct: 643 MVMSGFTMDSFAISSILKAAAL-SDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 58 ----CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDG 113
CC + + + P L+A WT
Sbjct: 702 SIDDCCKAFSQINGPDLIA------------------WT--------------------- 722
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
A+I+ Y +HG EA + M G + D+ T+ ++SA + GL
Sbjct: 723 ----------ALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 174 R-QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVSWNAIL 231
L++ V ++P + + +AL + G+L +A + M ++ D + W +L
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDAL----GRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 232 S-----GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL 286
+ G + ++ K I E+ + + + + LAE G +E + MK G+
Sbjct: 829 AACKIHGEVELGKVAAKKAI--ELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Query: 287 E 287
+
Sbjct: 887 Q 887
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 269/546 (49%), Gaps = 69/546 (12%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGI 150
+++I Y++ + A ++ D + P V W++M+SG+ ++G +A + FR+M + +
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYV--------------LRTVVQPSEHFILSVN 196
D T +L+SA GR +H +V L S F +VN
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 197 -------------NALITFYTKCGKLVQAREVFDKM------------------------ 219
+ +I Y + G +A VF+ M
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 220 ----------PVR-----DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
+R ++ A++ Y+ EEA +F +P +++++W +ISG
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 265 LAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
+G S++ F+ M E P + +C LG L+ + HS VI+ G DS
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
+ G +L+ +Y++CG +G A VF + D+V W ++I HG+G +A++ + M+
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 384 KE-DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGK 442
K ++ P+ +TFL+ILSACSHAGL+ EG F M Y + P +HYA L+DLL R G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 443 FSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNM 502
A ++T+ MPF P+ I +LL CRIH N E+ A++LFEL G Y+++SN+
Sbjct: 520 LDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNV 579
Query: 503 YAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
Y G+W+ V ++R +++RG+KK S IEI VH F+ DD +HPE VY L++L
Sbjct: 580 YGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Query: 563 VIEMRK 568
+ M++
Sbjct: 640 DLHMKE 645
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 37/368 (10%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
AR++ MT WN ++ R +EE F M + D +T + A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
N G +H +V + V S+ L V ++LI Y KCG++++A +FD++ D+V+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSD---LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEG 285
W++ M+SG ++G ++++ F +M +
Sbjct: 130 WSS-------------------------------MVSGFEKNGSPYQAVEFFRRMVMASD 158
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
+ P + AC L + G+ +H VI+ G + LS N+L+ YAK A
Sbjct: 159 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV 218
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
+F + D +SW+ +IA Q+G +A+ ++ M+ + P+ T L +L AC+ A
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 406 LVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESL 465
+++G+ + + G+ L+D+ + EA V +P W +L
Sbjct: 279 DLEQGRKTHE-LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVAL 336
Query: 466 LAGCRIHG 473
++G ++G
Sbjct: 337 ISGFTLNG 344
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
+A+ +F E+ +R+L W ++ L+ EE L F+ M + +P ++ A+KACG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 302 VLGSLDNGQQIHSQV---IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
L ++ G+ IH V + LG D L G++LI MY KCG + A +F + D V+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSD--LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 359 WNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
W++M++ ++G QA++ + +M + D+ PDR+T +T++SAC+ + G+
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR------ 183
Query: 418 CTH-----YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
C H G + L++ ++ F EA + + M E W +++A
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVIA 237
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/467 (33%), Positives = 248/467 (53%), Gaps = 37/467 (7%)
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
V+WN MIS +V++GL +E +M G ++D T T+L+SA+ N G+Q HA+
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
++R +Q +N+ LI Y+K G + ++++F+ SGY
Sbjct: 445 LIRQGIQ-----FEGMNSYLIDMYSKSGLIRISQKLFEG-------------SGY----- 481
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
ER+ TW MISG ++G E++ +F +M + + P A + A
Sbjct: 482 -----------AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
C +GS+D G+Q+H I+ D ++ +AL+ MY+K G + YA+ +F +SV++
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
MI QHG G +AI L+ M + I PD ITF+ +LSACS++GL+ EG F+ M
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS-APIWESLLAGCRIHGNIELG 478
Y + P +HY + D+L R G+ +EA + + + E + A +W SLL C++HG +EL
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 479 IQAAERL--FELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
+ERL F+ G ++LSNMYA KW V +VR+ MRE+G+KKE G S IEI
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIA 770
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDME 583
V+ F+ D HP +Y ++ L +MR ++ V +E
Sbjct: 771 GYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLE 817
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 199/495 (40%), Gaps = 102/495 (20%)
Query: 82 PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 141
P PS + ++ ++ + AR+L D + P V WN +I G++ + L EA
Sbjct: 33 PTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLF 92
Query: 142 FRKMHSMG--IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE--------HF 191
+ +M D YTY+S + A T G+ +H +++R + S +
Sbjct: 93 YSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 192 ILSVN-------------------------NALITFYTKCGKLVQAREVFDKMP------ 220
+ +N N LI++Y K G+ +A F M
Sbjct: 153 VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKP 212
Query: 221 -----------------------------------VRDLVSWNAILSGYINARRLEEAKF 245
V+DL ++ +S Y +E ++
Sbjct: 213 SPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRR 272
Query: 246 IFREVPERNLLTWTVMISGLAESGFGEESLKLF-NQMKSEGLEPCDYAYAGAIKACGVLG 304
+F ERN+ W MI ++ ES++LF + S+ + + Y A A L
Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQ 332
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
++ G+Q H V + + + N+L+ MY++CG V + VFL+M D VSWN MI+
Sbjct: 333 QVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMIS 392
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS-----------HAGLVKEGQHY 413
A Q+G + + L +M K+ D IT +LSA S HA L+++G
Sbjct: 393 AFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ- 451
Query: 414 FDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF-EPSAPIWESLLAGCRIH 472
F+ M ++ LID+ ++G ++K+ E + E W S+++G +
Sbjct: 452 FEGMNSY------------LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQN 499
Query: 473 GNIELGIQAAERLFE 487
G+ E ++ E
Sbjct: 500 GHTEKTFLVFRKMLE 514
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 245/481 (50%), Gaps = 45/481 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + + AR D M H V+W A+ISGY+R G + A F +M
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---- 172
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
++ VV + NA++ + K G +
Sbjct: 173 -----------------------------VKDVV---------IYNAMMDGFVKSGDMTS 194
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
AR +FD+M + +++W ++ GY N + ++ A+ +F +PERNL++W MI G ++
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 272 EESLKLFNQMK-SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+E ++LF +M+ + L+P D + A G+L G+ H V + D + A
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
++ MY+KCG + A +F MP SWNAMI A +G A+ L+ M+ E+ PD
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPD 373
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
IT L +++AC+H GLV+EG+ +F M G+ +HY ++DLL RAG EA+ +
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
+MPFEP+ I S L+ C + +IE + ++ EL P+ DG Y++L N+YA +WD
Sbjct: 433 TNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWD 492
Query: 511 EVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
+ V+ +MR+ KKE GCS IEI +V F+ D HP +++ L L++ M +
Sbjct: 493 DFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEK 552
Query: 571 Y 571
Y
Sbjct: 553 Y 553
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 126/248 (50%), Gaps = 14/248 (5%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
M SAR+LFDE ++ K +WTTMI GY D+ +ARKL D M V+WN MI GY
Sbjct: 192 MTSARRLFDE--MTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYC 249
Query: 131 RHGLYEEAFDTFRKMH-SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 189
++ +E F++M + + D+ T S++ A +TG + G H +V R +
Sbjct: 250 QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK- 308
Query: 190 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI---NARRLEE--AK 244
+ V A++ Y+KCG++ +A+ +FD+MP + + SWNA++ GY NAR +
Sbjct: 309 ---VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 245 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG 304
+ E P+ +T +I+ G EE K F+ M+ GL Y + G G
Sbjct: 366 MMIEEKPDE--ITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAG 423
Query: 305 SLDNGQQI 312
SL + +
Sbjct: 424 SLKEAEDL 431
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 29/305 (9%)
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERN-LLTWTVMISGLAESGFGE 272
++F K V +S +A+ GY AR+L F + P+R+ MI E+
Sbjct: 11 QIFTKFLV---ISASAVGIGY--ARKL------FDQRPQRDDSFLSNSMIKAYLETRQYP 59
Query: 273 ESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
+S L+ ++ E P ++ + K+C + + G Q+HSQ+ + G + + +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MYAK G +G A F MP+ VSW A+I+ + G A +L++QM + D
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDV 176
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+ + ++ +G + + FD M +T + +I C A+K+ +
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFD 231
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYA------- 504
+MP E + W +++ G + + GI+ + + T ILS + A
Sbjct: 232 AMP-ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGAL 290
Query: 505 HLGKW 509
LG+W
Sbjct: 291 SLGEW 295
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 269 bits (688), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 233/476 (48%), Gaps = 40/476 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG-----LYEEAFDTFRKMH 146
T ++ Y +N L A KL M V +NAMISG+++ EAF F M
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G++ T++ ++ A GRQ+HA + + Q E + +ALI Y
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF----IGSALIELYALM 406
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G + F +D+ SW +++ ++ +L
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQL-------------------------- 440
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
E + LF Q+ S + P +Y + + AC +L +G+QI I+ G D+ S
Sbjct: 441 -----ESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTS 495
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
+ I+MYAK G + A+ VF+ + D +++AMI++LAQHG +A+ ++E M
Sbjct: 496 VKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG 555
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
I P++ FL +L AC H GLV +G YF M Y + P E H+ L+DLL R G+ S+A
Sbjct: 556 IKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDA 615
Query: 447 KKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHL 506
+ + S F+ W +LL+ CR++ + +G + AERL EL PE G+Y++L N+Y
Sbjct: 616 ENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDS 675
Query: 507 GKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
G VR+LMR+RGVKKEP SWI I N H F V D HP +Y LE +
Sbjct: 676 GVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 182/414 (43%), Gaps = 49/414 (11%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + +L AR+L D M +++N++ISGY + G YE+A + F + +++D++TY
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+ + G LH V+ + I N LI Y+KCGKL QA +FD
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI----NVLIDMYSKCGKLDQAMSLFD 207
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+ RD VSWN+++SGY+ G EE L L
Sbjct: 208 RCDERDQVSWNSLISGYVRV-------------------------------GAAEEPLNL 236
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGV---LGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
+M +GL YA +KAC + G ++ G IH +LG + + AL+ M
Sbjct: 237 LAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR-----GVQAIQLYEQMLKEDILP 389
YAK G + A +F MP + V++NAMI+ Q +A +L+ M + + P
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
TF +L ACS A ++ G+ +C + E + LI+L G + +
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKN-NFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 450 TESMPFEPSAPIWESLLAGCRIHG-NIELGIQAAERLFE--LTPEQDGTYIILS 500
S + A W S++ C + +E +LF + PE+ +++S
Sbjct: 416 FASTSKQDIAS-WTSMI-DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 176/410 (42%), Gaps = 45/410 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I Y + L A L D V+WN++ISGYVR G EE + KMH G+
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLN 246
Query: 152 MDEYTYTSLISA---SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
+ Y S++ A + N G G +H Y + ++ F + V AL+ Y K G
Sbjct: 247 LTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGME----FDIVVRTALLDMYAKNGS 302
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
L +A ++F MP +++V++NA++SG++ + +
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA------------------------ 338
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
E+ KLF M+ GLEP ++ +KAC +L+ G+QIH+ + + S G
Sbjct: 339 --SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
+ALI +YA G F + D SW +MI Q+ + A L+ Q+ I
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARL----IDLLCRAGKFS 444
P+ T ++SAC+ + G+ Y + G D + + I + ++G
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHG--NIELGIQAAERLFELTPEQ 492
A +V + P + ++++ HG N L I + + + P Q
Sbjct: 512 LANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQ 560
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 163/390 (41%), Gaps = 88/390 (22%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+R G P P +FS VL A S E+ +Q+H + K +
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYG-RQIHALICKNNFQSDEFI------------ 395
Query: 61 SSTLVESPVLMASARKLFD-EAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
S L+E LM S A S++D SWT+MI +V+N+ L
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQL--------------- 440
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
E AFD FR++ S I+ +EYT + ++SA + + G Q+ Y
Sbjct: 441 ----------------ESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+++ + SV + I+ Y K G + A +VF ++ D+
Sbjct: 485 AIKSGIDA----FTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA-------------- 526
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
T++ MIS LA+ G E+L +F MK+ G++P A+ G + A
Sbjct: 527 -----------------TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAG----NALITMYAKCGVVGYADMVFLTMPYVD 355
C G + G + + Q ++ +D ++ L+ + + G + A+ + L+ + D
Sbjct: 570 CCHGGLVTQGLK-YFQCMK--NDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQD 626
Query: 356 -SVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
V+W A++++ + V ++ E++++
Sbjct: 627 HPVTWRALLSSCRVYKDSVIGKRVAERLME 656
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 13/228 (5%)
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA--YAGAIKAC 300
AK F + + +L+T G G L Q K+ L+ Y + A K+
Sbjct: 7 AKTFFNNIAQDSLVTLIT-----KRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKS- 60
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
GS+ G+ H +I+ + L N L+ MY KC +G+A +F MP + +S+N
Sbjct: 61 ---GSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
++I+ Q G QA++L+ + + ++ D+ T+ L C + G+ +
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE-LLHGLVVV 176
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
G++ LID+ + GK +A + + E W SL++G
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 245/465 (52%), Gaps = 38/465 (8%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y L+ +L ++ VAWN++IS Y G+ +A FR+M + I+ D +T
Sbjct: 349 YAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 408
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
S ISA N GL G+Q+H +V+RT V S+ F V N+LI Y+K G +
Sbjct: 409 ASSISACENAGLVPLGKQIHGHVIRTDV--SDEF---VQNSLIDMYSKSGSV-------- 455
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+ A +F ++ R+++TW M+ G +++G E++ L
Sbjct: 456 -----------------------DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F+ M LE + + I+AC +GSL+ G+ +H ++I G L ALI MYAK
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAK 551
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG + A+ VF M VSW++MI A HGR AI + QM++ P+ + F+ +
Sbjct: 552 CGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNV 611
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
LSAC H+G V+EG++YF+ M +G++P +H+A IDLL R+G EA + + MPF
Sbjct: 612 LSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 670
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
A +W SL+ GCRIH +++ L ++ + G Y +LSN+YA G+W+E R+R
Sbjct: 671 DASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRS 730
Query: 518 LMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
M+ +KK PG S IEI+ V F + + +Y++L L
Sbjct: 731 AMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 182/386 (47%), Gaps = 43/386 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ Y + +L+ A K+ DGM VAW+ ++S + +G +A F+ M G++
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D T S++ G R +H + R + E ++ N+L+T Y+KCG L+
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE----TLCNSLLTMYSKCGDLLS 255
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+ +F+K+ ++ VSW A++S Y F
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSYNRGE-------------------------------FS 284
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL-SAGNA 330
E++L+ F++M G+EP + +CG++G + G+ +H ++ D + S A
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+ +YA+CG + + V + + V+WN++I+ A G +QA+ L+ QM+ + I PD
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR--LIDLLCRAGKFSEAKK 448
T + +SAC +AGLV G+ + H T D + + LID+ ++G A
Sbjct: 405 AFTLASSISACENAGLVPLGKQ----IHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSAST 460
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGN 474
V + S W S+L G +GN
Sbjct: 461 VFNQIKHR-SVVTWNSMLCGFSQNGN 485
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
++D T +I Y S+R + + +P + + +I V L + A D + +
Sbjct: 31 RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHR 90
Query: 145 MHSMGIQMDEYTYTSLISASFNTGL-FNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
+ S Q+ ++ + S++ A + + G ++H +++ V + +L+ Y
Sbjct: 91 LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDA----VIETSLLCMY 146
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
+ G L A +VFD M P R+L+ W+ ++S
Sbjct: 147 GQTGNLSDAEKVFDGM-------------------------------PVRDLVAWSTLVS 175
Query: 264 GLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
E+G ++L++F M +G+EP ++ C LG L + +H Q+ + D
Sbjct: 176 SCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
+ N+L+TMY+KCG + ++ +F + ++VSW AMI++ + +A++ + +M+
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQ--HYFDSMCTHYGMTPG-EDHYARLIDLLCRA 440
K I P+ +T ++LS+C GL++EG+ H F + P E L++L
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF---AVRRELDPNYESLSLALVELYAEC 352
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLA 467
GK S+ + V + + + W SL++
Sbjct: 353 GKLSDCETVLRVVS-DRNIVAWNSLIS 378
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 158/352 (44%), Gaps = 42/352 (11%)
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
LV R D +PV L+ A + G ++ RL +F P + + V+I
Sbjct: 25 LVTGRLRRDPLPVTKLIESYAFM-GSPDSSRL-----VFEAFPYPDSFMYGVLIKCNVWC 78
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC-GVLGSLDNGQQIHSQVIQLGHDSSLSA 327
+ ++ L++++ SE + + + ++AC G L G ++H ++I+ G D
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
+L+ MY + G + A+ VF MP D V+W+ ++++ ++G V+A+++++ M+ + +
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 388 LPDRITFLTILSACSHAGLVK-----EGQ---HYFD-------SMCTHYGMTPGEDHYAR 432
PD +T ++++ C+ G ++ GQ FD S+ T Y R
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 433 LIDLLCRA--------------GKFSEA--KKVTESMP--FEPSAPIWESLLAGCRIHGN 474
+ + + + G+FSE + +E + EP+ S+L+ C + G
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 475 IELG--IQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
I G + EL P + + L +YA GK + V +++ +R +
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
KD + T +I Y + DL +A + M+ V+W++MI+ Y HG A TF +M
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP-SEHFILSVNNALITFYT 204
G + +E + +++SA ++G G+ + V P SEHF I +
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFA-----CFIDLLS 651
Query: 205 KCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFI---FREVPERNLLTWTV 260
+ G L +A +MP + D W ++++G ++++ K I ++ + +T+
Sbjct: 652 RSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTL 711
Query: 261 MISGLAESGFGEESLKLFNQMKSEGLE 287
+ + AE G EE +L + MKS L+
Sbjct: 712 LSNIYAEEGEWEEFRRLRSAMKSSNLK 738
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/445 (32%), Positives = 237/445 (53%), Gaps = 38/445 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ YV+ D+++AR++ + +H V W AMI GY +G EA F+KM + I+
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ T S++S GR +H ++ + + +V NAL+ Y KC
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-----NVANALVHMYAKC----- 390
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
Y N +AK++F E++++ W +ISG +++G
Sbjct: 391 ----------------------YQN----RDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH--DSSLSAGN 329
E+L LF++M SE + P A AC LGSL G +H+ ++LG SS+ G
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
AL+ YAKCG A ++F T+ ++++W+AMI + G + +++L+E+MLK+ P
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
+ TF +ILSAC H G+V EG+ YF SM Y TP HY ++D+L RAG+ +A +
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
E MP +P + + L GC +H +LG +++ +L P+ Y+++SN+YA G+W
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 510 DEVARVRKLMRERGVKKEPGCSWIE 534
++ VR LM++RG+ K G S +E
Sbjct: 665 NQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 226/526 (42%), Gaps = 109/526 (20%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPS----VLNTLLSCY 56
+ + GF D FS L A + + + + + +++HC +VK VPS VL LL Y
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLD-NGKKIHCQLVK-----VPSFDNVVLTGLLDMY 186
Query: 57 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 116
C + SA K+F++ L ++ WT+MIAGYV+ND
Sbjct: 187 AKCGE---------IKSAHKVFNDITL--RNVVCWTSMIAGYVKND-------------- 221
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
L EE F +M + +EYTY +LI A + G+
Sbjct: 222 -----------------LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H ++++ ++ S + S L+ Y KCG + AR VF++ DLV W A++ GY
Sbjct: 265 HGCLVKSGIELSSCLVTS----LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY-- 318
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
+G E+L LF +MK ++P A
Sbjct: 319 -----------------------------THNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 297 IKACGVLGSLDNGQQIHSQVIQLG-HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
+ CG++ +L+ G+ +H I++G D++++ NAL+ MYAKC A VF D
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH--- 412
V+WN++I+ +Q+G +A+ L+ +M E + P+ +T ++ SAC+ G + G
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 413 ------YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLL 466
+ S H G L+D + G A+ + +++ E + W +++
Sbjct: 468 YSVKLGFLASSSVHVGTA--------LLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMI 518
Query: 467 AGCRIHGNIELGIQAAERLFELTPE-QDGTYIILSNMYAHLGKWDE 511
G G+ ++ E + + + + T+ + + H G +E
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNE 564
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 199/476 (41%), Gaps = 64/476 (13%)
Query: 2 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 61
+R GF P SF+T+ LI EE LH S LLS C
Sbjct: 11 RRFGFPPRCVSFTTI---KELILTEENDGSSLH--------YAASSPCFLLLS--KCTNI 57
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 121
+L +S ++ + L + ++ K + GY ++ AR + D + P
Sbjct: 58 DSLRQSHGVL-TGNGLMGDISIATKLVSLYG--FFGYTKD-----ARLVFDQIPEPDFYL 109
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
W M+ Y + E + + G + D+ ++ + A + G+++H ++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+ PS F V L+ Y KCG++ A +
Sbjct: 170 KV---PS--FDNVVLTGLLDMYAKCGEIKSAHK--------------------------- 197
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
+F ++ RN++ WT MI+G ++ EE L LFN+M+ + +Y Y I AC
Sbjct: 198 ----VFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACT 253
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
L +L G+ H +++ G + S +L+ MY KCG + A VF +VD V W A
Sbjct: 254 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 313
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK--EGQHYFDSMCT 419
MI +G +A+ L+++M +I P+ +T ++LS C GL++ E +
Sbjct: 314 MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIENLELGRSVHGLSI 370
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
G+ A L+ + + + +AK V E M E W S+++G +G+I
Sbjct: 371 KVGIWDTNVANA-LVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSI 424
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 127/254 (50%), Gaps = 7/254 (2%)
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
++A+ +F ++PE + W VM+ + E +KL++ + G D ++ A+KAC
Sbjct: 93 KDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 301 GVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
L LDNG++IH Q++++ D+ + G L+ MYAKCG + A VF + + V W
Sbjct: 153 TELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCW 210
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
+MIA ++ + + L+ +M + ++L + T+ T++ AC+ + +G+ +F
Sbjct: 211 TSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK-WFHGCLV 269
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
G+ L+D+ + G S A++V +W +++ G +G++ +
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMIVGYTHNGSVNEAL 328
Query: 480 QAAERL--FELTPE 491
+++ E+ P
Sbjct: 329 SLFQKMKGVEIKPN 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 118/243 (48%), Gaps = 15/243 (6%)
Query: 51 TLLSCYICCAS-STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 109
T+ S + CAS +L L A + KL L+ T ++ Y + D SAR
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKL---GFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 110 LLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL 169
+ D + + W+AMI GY + G + + F +M + +E T+TS++SA +TG+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 170 FNCGRQLHAYVLR--TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-DLVS 226
N G++ + + + ++H+ ++ + G+L QA ++ +KMP++ D+
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHY-----TCMVDMLARAGELEQALDIIEKMPIQPDVRC 616
Query: 227 WNAILSGYINARRLEEAKFIFREVPER--NLLTWTVMISGL-AESGFGEESLKLFNQMKS 283
+ A L G R + + + +++ + + ++ V++S L A G ++ ++ N MK
Sbjct: 617 FGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQ 676
Query: 284 EGL 286
GL
Sbjct: 677 RGL 679
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 13/213 (6%)
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
++D+ +Q H + G +S L+++Y G A +VF +P D W M+
Sbjct: 56 NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLR 115
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMT 424
+ V+ ++LY+ ++K D I F L AC+ + G+ +
Sbjct: 116 CYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK----V 171
Query: 425 PGEDH--YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
P D+ L+D+ + G+ A KV + + W S++AG + E G+
Sbjct: 172 PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 483 ERLFE---LTPEQD-GTYIILSNMYA--HLGKW 509
R+ E L E GT I+ + H GKW
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 246/454 (54%), Gaps = 12/454 (2%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y++ L +R++ D M +V++N+MI GYV+ GL A + F M ++M
Sbjct: 162 LIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELF---DLMPMEMK 218
Query: 154 EY-TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 212
++ S+IS T + G + + + + P + I N++I Y K G++ A
Sbjct: 219 NLISWNSMISGYAQT---SDGVDIASKLFADM--PEKDLI--SWNSMIDGYVKHGRIEDA 271
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
+ +FD MP RD+V+W ++ GY + AK +F ++P R+++ + M++G ++ +
Sbjct: 272 KGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHM 331
Query: 273 ESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E+L++F+ M+ E L P D + A LG L +H +++ G AL
Sbjct: 332 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVAL 391
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MY+KCG + +A +VF + WNAMI LA HG G A + Q+ + + PD
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD 451
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
ITF+ +L+ACSH+GLVKEG F+ M + + P HY ++D+L R+G AK + E
Sbjct: 452 ITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIE 511
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
MP EP+ IW + L C H E G A+ L +Y++LSNMYA G W +
Sbjct: 512 EMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKD 571
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVD 545
V RVR +M+ER ++K PGCSWIE++ VH F VD
Sbjct: 572 VRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVD 605
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 201/419 (47%), Gaps = 34/419 (8%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
WNA+I + +A M G+ +D+++ + ++ A G G Q+H ++
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
+T + L + N LI Y KCG L +R++FD+MP RD VS+N+++ GY+ +
Sbjct: 149 KTGLWSD----LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 242 EAKFIFREVP--ERNLLTWTVMISGLAESGFGEE-SLKLFNQMKSEGLEPCDYAYAGAIK 298
A+ +F +P +NL++W MISG A++ G + + KLF M + L + G +K
Sbjct: 205 SARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
G +++ + + + + + +I YAK G V +A +F MP+ D V+
Sbjct: 265 H----GRIEDAKGLFDVMPR----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKED-ILPDRITFLTILSACSHAGLVKEG---QHYF 414
+N+M+A Q+ ++A++++ M KE +LPD T + +L A + G + + Y
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+ G G LID+ + G A V E + S W +++ G IHG
Sbjct: 377 VEKQFYLGGKLG----VALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHG- 430
Query: 475 IELGIQAAERLFE-----LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEP 528
LG A + L + L P+ D T++ + N +H G E +LMR R K EP
Sbjct: 431 --LGESAFDMLLQIERLSLKPD-DITFVGVLNACSHSGLVKEGLLCFELMR-RKHKIEP 485
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 151/388 (38%), Gaps = 87/388 (22%)
Query: 74 ARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG 133
A+ LFD P ++D +W TMI GY + + A+ L D M H VA+N+M++GYV++
Sbjct: 271 AKGLFDVMP--RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 134 LYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 192
+ EA + F M + D+ T ++ A G + +H Y +V+ +
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY----IVEKQFYLG 384
Query: 193 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 252
+ ALI Y+KCG + A VF+ + + + WNA
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNA----------------------- 421
Query: 253 RNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNG--- 309
MI GLA G GE + + Q++ L+P D + G + AC G + G
Sbjct: 422 --------MIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLC 473
Query: 310 ----QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAA 365
++ H +L H + M+
Sbjct: 474 FELMRRKHKIEPRLQH-------------------------------------YGCMVDI 496
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
L++ G A L E+M E P+ + + T L+ACSH + G+ + G P
Sbjct: 497 LSRSGSIELAKNLIEEMPVE---PNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Query: 426 GEDHYARLIDLLCRAGKFSEAKKVTESM 453
Y L ++ G + + ++V M
Sbjct: 554 SS--YVLLSNMYASFGMWKDVRRVRTMM 579
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 19/252 (7%)
Query: 245 FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG 304
F F EV + L W +I + ++L L M G+ ++ + +KAC LG
Sbjct: 78 FSFGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLG 135
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
+ G QIH + + G S L N LI +Y KCG +G + +F MP DSVS+N+MI
Sbjct: 136 FVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMT 424
+ G V A +L++ M E + + I++ +++S + +G D +
Sbjct: 196 GYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQT---SDG---VDIASKLFADM 247
Query: 425 PGED--HYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG-IQA 481
P +D + +ID + G+ +AK + + MP W ++ I G +LG +
Sbjct: 248 PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATM-----IDGYAKLGFVHH 301
Query: 482 AERLFELTPEQD 493
A+ LF+ P +D
Sbjct: 302 AKTLFDQMPHRD 313
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/537 (31%), Positives = 269/537 (50%), Gaps = 90/537 (16%)
Query: 4 DGFAPDPFSFSTVL---GAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
+GF+PD F+F V G S I E +Q+H V K G V N+L+ Y C
Sbjct: 100 NGFSPDMFTFPPVFKACGKFSGIREG----KQIHGIVTKMGFYDDIYVQNSLVHFYGVCG 155
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S +A K+F E P VR+ V
Sbjct: 156 ESR---------NACKVFGEMP----------------VRD-----------------VV 173
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+W +I+G+ R GLY+EA DTF KM ++ + TY ++ +S G + G+ +H +
Sbjct: 174 SWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLI 230
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
L+ S L NALI Y KC +L
Sbjct: 231 LKRASLIS----LETGNALIDMYVKC-------------------------------EQL 255
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK-SEGLEPCDYAYAGAIKA 299
+A +F E+ +++ ++W MISGL +E++ LF+ M+ S G++P + + A
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
C LG++D+G+ +H ++ G G A++ MYAKCG + A +F + + +W
Sbjct: 316 CASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTW 375
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
NA++ LA HG G+++++ +E+M+K P+ +TFL L+AC H GLV EG+ YF M +
Sbjct: 376 NALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKS 435
Query: 420 H-YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI-EL 477
Y + P +HY +IDLLCRAG EA ++ ++MP +P I ++L+ C+ G + EL
Sbjct: 436 REYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMEL 495
Query: 478 GIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
+ + ++ E G Y++LSN++A +WD+VAR+R+LM+ +G+ K PG S+IE
Sbjct: 496 PKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 174/406 (42%), Gaps = 42/406 (10%)
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
+ ++N ++S Y ++ S G D +T+ + A G+Q+H
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
V + + V N+L+ FY CG+ A +VF +MPV
Sbjct: 131 IVTKMGFYDD----IYVQNSLVHFYGVCGESRNACKVFGEMPV----------------- 169
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
R++++WT +I+G +G +E+L F++M +EP Y +
Sbjct: 170 --------------RDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLV 212
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
+ G +G L G+ IH +++ SL GNALI MY KC + A VF + D VS
Sbjct: 213 SSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVS 272
Query: 359 WNAMIAALAQHGRGVQAIQLYEQM-LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
WN+MI+ L R +AI L+ M I PD ++LSAC+ G V G+ + +
Sbjct: 273 WNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI 332
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIEL 477
T G+ ++D+ + G A ++ + + W +LL G IHG+
Sbjct: 333 LTA-GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGHGLE 390
Query: 478 GIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVRKLMRER 522
++ E + +L + + T++ N H G DE R M+ R
Sbjct: 391 SLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 239/472 (50%), Gaps = 36/472 (7%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y++ + A L M + W M++G+ + G +A + +R+M + G D
Sbjct: 161 YMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVM 220
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
L+ AS + G GR +H Y+ RT + + + V +L+ Y K G + A VF
Sbjct: 221 LGLLQASGDLGDTKMGRSVHGYLYRTGLPMN----VVVETSLVDMYAKVGFIEVASRVFS 276
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+M + VSW + +ISG A++G ++ +
Sbjct: 277 RMMFKTAVSWGS-------------------------------LISGFAQNGLANKAFEA 305
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
+M+S G +P G + AC +GSL G+ +H +++ H AL+ MY+K
Sbjct: 306 VVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRVTATALMDMYSK 364
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
CG + + +F + D V WN MI+ HG G + + L+ +M + +I PD TF ++
Sbjct: 365 CGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASL 424
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
LSA SH+GLV++GQH+F M Y + P E HY LIDLL RAG+ EA + S +
Sbjct: 425 LSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDN 484
Query: 458 SAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
+ PIW +LL+GC H N+ +G AA ++ +L P+ G ++SN +A KW EVA+VRK
Sbjct: 485 ALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRK 544
Query: 518 LMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
LMR ++K PG S IE+ + FL++D H E + + + L L E+R +
Sbjct: 545 LMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 5/246 (2%)
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
A+ +F E+P+R + + MI + +E L+L++QM +E ++P + IKAC
Sbjct: 69 ARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLS 128
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
L+ G+ + + + G+ + + ++++ +Y KCG + A+++F M D + W M
Sbjct: 129 GLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTM 188
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
+ AQ G+ ++A++ Y +M E DR+ L +L A G K G+ + G
Sbjct: 189 VTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL-YRTG 247
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAA 482
+ L+D+ + G A +V M F+ +A W SL++G +G L +A
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLISGFAQNG---LANKAF 303
Query: 483 ERLFEL 488
E + E+
Sbjct: 304 EAVVEM 309
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 311 QIHSQVIQLGH---DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALA 367
QIH+ VI G+ SS+S LI + G + YA VF +P +N+MI +
Sbjct: 35 QIHAFVISTGNLLNGSSIS--RDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
+ + ++LY+QM+ E I PD TF + AC +GLV E +G
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ +++L + GK EA+ + M + W +++ G
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICWTTMVTG 191
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 172/602 (28%), Positives = 288/602 (47%), Gaps = 54/602 (8%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
MKR GF P+ F+F V A + +A+ C+ +H ++K V + ++ C
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGC-CEMVHAHLIKSPFWSDVFVGTATVDMFVKCN 101
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S + A K+F+ P ++D +W M++G+ ++ A L M
Sbjct: 102 S---------VDYAAKVFERMP--ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+ + ++ +E++ MH++GI++ ++ + +T CG A +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST-YGKCGDLDSAKL 209
Query: 181 LRTVVQPSEHFILSVNN-------------------------------ALITFYTKC--- 206
+ + + ++S N+ I C
Sbjct: 210 VFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNP 269
Query: 207 -----GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 261
G+L+ + + +D+ + N +S Y + A+ +F + R ++WTVM
Sbjct: 270 ETLTQGRLIHSHAIHLGTD-QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG- 320
ISG AE G +E+L LF+ M G +P I CG GSL+ G+ I ++ G
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
++ NALI MY+KCG + A +F P V+W MIA A +G ++A++L+
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
+M+ D P+ ITFL +L AC+H+G +++G YF M Y ++PG DHY+ ++DLL R
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 441 GKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILS 500
GK EA ++ +M +P A IW +LL C+IH N+++ QAAE LF L P+ Y+ ++
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 501 NMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLE 560
N+YA G WD AR+R +M++R +KK PG S I++ H F V + H E +Y L
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 628
Query: 561 QL 562
L
Sbjct: 629 GL 630
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 39/358 (10%)
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
AWN I V E+ FR+M G + + +T+ + A C +HA++
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
+++ + V A + + KC + A +VF++MP RD +WNA+LSG+ +
Sbjct: 79 IKSPFWSD----VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
++A +FRE+ + +V + L +S E+SLKL M + G
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG--------------- 179
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS--VS 358
I+LG D ++ N I+ Y KCG + A +VF + D VS
Sbjct: 180 ----------------IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS 223
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
WN+M A + G A LY ML+E+ PD TF+ + ++C + + +G+ S
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHA 282
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
H G + I + ++ A+ + + M W +++G G+++
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS-WTVMISGYAEKGDMD 339
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/659 (26%), Positives = 295/659 (44%), Gaps = 90/659 (13%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ G P+ F++S +L S + ++ +Q+H +K G V N L+ Y+ C+
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCS 374
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+S + A ++ M P V
Sbjct: 375 ASEV-----------------------------------------EASRVFGAMVSPNVV 393
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+W +I G V HG ++ F +M ++ + T + ++ A ++HAY+
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
LR V ++V N+++ Y ++R++
Sbjct: 454 LRRHVDG-----------------------------------EMVVGNSLVDAYASSRKV 478
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+ A + R + R+ +T+T +++ E G E +L + N M +G+ + G I A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
LG+L+ G+ +H ++ G + S N+L+ MY+KCG + A VF + D VSWN
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
+++ LA +G A+ +E+M ++ PD +TFL +LSACS+ L G YF M
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
Y + P +HY L+ +L RAG+ EA V E+M +P+A I+++LL CR GN+ LG
Sbjct: 659 YNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGED 718
Query: 481 AAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVH 540
A + L P YI+L+++Y GK + + R LM E+ + K+ G S +E++ VH
Sbjct: 719 MANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVH 778
Query: 541 VFLVDDAVH-PEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLA 599
F+ +D + + +Y +E + E+++ G E+A S HS K A
Sbjct: 779 SFVSEDVTRVDKTNGIYAEIESIKEEIKRFGS-----------PYRGNENA-SFHSAKQA 826
Query: 600 VVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSC 658
VVYG + A + V KN +C DCH +++ NGECSC
Sbjct: 827 VVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 193/411 (46%), Gaps = 56/411 (13%)
Query: 32 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 91
+HC V+K+G++ + N LLS Y+ + +ARKLFDE +S + +W
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDG---------IWNARKLFDE--MSHRTVFAW 92
Query: 92 TTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISG------------------- 128
T MI+ + ++ + ASA L + M THP +++++
Sbjct: 93 TVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIK 152
Query: 129 ----------------YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 172
Y + G ++EA + F + + D ++T +IS+ +
Sbjct: 153 TGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA----DTISWTMMISSLVGARKWRE 208
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
Q ++ +++ V P+E + + A + GK + + + +P+ ++V +++
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL-NVVLKTSLVD 267
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
Y ++E+A + E+++ WT ++SG + +E++ F +M+S GL+P ++
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY-ADMVFLTM 351
Y+ + C + SLD G+QIHSQ I++G + S GNAL+ MY KC A VF M
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
+ VSW +I L HG L +M+K ++ P+ +T +L ACS
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N +LS Y+ + A+ +F E+ R + WTVMIS +S +L LF +M + G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P ++ ++ +++C L + G ++H VI+ G + + G++L +Y+KCG A +
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
F ++ D++SW MI++L + +A+Q Y +M+K + P+ TF+ +L A S GL
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL- 240
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
E S G+ L+D + K +A +V S E +W S+++
Sbjct: 241 -EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVS 298
Query: 468 G 468
G
Sbjct: 299 G 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQ 368
G IH VI+ G +L N L+++Y K + A +F M + +W MI+A +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
A+ L+E+M+ P+ TF +++ +C+ + G S+ G
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV-IKTGFEGNSV 160
Query: 429 HYARLIDLLCRAGKFSEAKKVTESM 453
+ L DL + G+F EA ++ S+
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSL 185
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 259/539 (48%), Gaps = 79/539 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M R G++PD F+F VL A S + + ++ +H VVK G V LL Y+CC
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFG-SCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ ++F+ D P W V
Sbjct: 157 E---------VNYGLRVFE-------DIPQWNV--------------------------V 174
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
AW ++ISG+V + + +A + FR+M S G++ +E L+ A G+ H ++
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 181 ----LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
Q F + + +LI Y KCG L AR +FD MP R LVSWN+I++GY
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY-- 292
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
+++G EE+L +F M G+ P +
Sbjct: 293 -----------------------------SQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
I+A + G GQ IH+ V + G + AL+ MYAK G A F + D+
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
++W +I LA HG G +A+ ++++M K + PD IT+L +L ACSH GLV+EGQ YF
Sbjct: 384 IAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA 443
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
M +G+ P +HY ++D+L RAG+F EA+++ ++MP +P+ IW +LL GC IH N+
Sbjct: 444 EMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENL 503
Query: 476 ELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
EL + + E G Y++LSN+YA G+W +V +R+ M+ + V K G S +E
Sbjct: 504 ELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 190/431 (44%), Gaps = 51/431 (11%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
+L+ AR + + + P WN+MI GY ++A +++M G D +T+ ++
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
A G +H +V++T + + + V+ L+ Y CG++ VF+ +P
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVN----MYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
++V+W +++SG++N R +A FRE M+
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFRE-------------------------------MQ 200
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA--------GNALITM 334
S G++ + + ACG + G+ H + LG D + +LI M
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
YAKCG + A +F MP VSWN++I +Q+G +A+ ++ ML I PD++TF
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 320
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
L+++ A G + GQ + + G L+++ + G AKK E +
Sbjct: 321 LSVIRASMIQGCSQLGQS-IHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
Query: 455 FEPSAPIWESLLAGCRIHGNIELGIQAAERLFE---LTPEQDG-TYIILSNMYAHLGKWD 510
+ + W ++ G HG+ + +R+ E TP DG TY+ + +H+G +
Sbjct: 380 KKDTIA-WTVVIIGLASHGHGNEALSIFQRMQEKGNATP--DGITYLGVLYACSHIGLVE 436
Query: 511 EVARVRKLMRE 521
E R MR+
Sbjct: 437 EGQRYFAEMRD 447
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 122/278 (43%), Gaps = 13/278 (4%)
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G ++++ + + +P+ L+ + +N L A+ +F + ++ W MI G +
Sbjct: 27 GLMIKSSVIRNVIPLSRLIDFCTTCPETMN---LSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
S +++L + +M +G P + + +KAC L + G +H V++ G + ++
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMY 143
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
L+ MY CG V Y VF +P + V+W ++I+ + R AI+ + +M
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY--------ARLIDLLC 438
+ + + +L AC + G+ +F G P LID+
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGK-WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 439 RAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
+ G A+ + + MP E + W S++ G +G+ E
Sbjct: 263 KCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAE 299
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 233/464 (50%), Gaps = 52/464 (11%)
Query: 81 APLSQKDEPSWTTMIAGYVRN-DDLASARKL---------LDGMTHPIAVAWNAMISGYV 130
PLS +D ++A + N LA R++ LD +PIA WN ++ Y+
Sbjct: 39 TPLSPQDR---NKLLATLLSNCTSLARVRRIHGDIFRSRILD--QYPIAFLWNNIMRSYI 93
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
RH +A + M + D Y+ +I A+ F G++LH+ +R E
Sbjct: 94 RHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEF 153
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
+ IT Y K G+ AR+V F E
Sbjct: 154 ----CESGFITLYCKAGEFENARKV-------------------------------FDEN 178
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
PER L +W +I GL +G E++++F MK GLEP D+ +CG LG L
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAF 238
Query: 311 QIHSQVIQLGHD--SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQ 368
Q+H V+Q + S + N+LI MY KCG + A +F M + VSW++MI A
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
+G ++A++ + QM + + P++ITF+ +LSAC H GLV+EG+ YF M + + + PG
Sbjct: 299 NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLS 358
Query: 429 HYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
HY ++DLL R G+ EAKKV E MP +P+ +W L+ GC G++E+ A + EL
Sbjct: 359 HYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVEL 418
Query: 489 TPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSW 532
P DG Y++L+N+YA G W +V RVRKLM+ + V K P S+
Sbjct: 419 EPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 236/451 (52%), Gaps = 36/451 (7%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
KD+ +++ Y + + SA+K+ D + +V W ++ GY+++ E F F M
Sbjct: 142 KDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM 201
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYT 204
G+ +D T L+ A N G+ +H + R+ + S++ S+ I Y
Sbjct: 202 RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI----IDMYV 257
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
KC R L+ A+ +F +RN++ WT +ISG
Sbjct: 258 KC-------------------------------RLLDNARKLFETSVDRNVVMWTTLISG 286
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
A+ E+ LF QM E + P A + +C LGSL +G+ +H +I+ G +
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMD 346
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
+ I MYA+CG + A VF MP + +SW++MI A +G +A+ + +M
Sbjct: 347 AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS 406
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
++++P+ +TF+++LSACSH+G VKEG F+SM YG+ P E+HYA ++DLL RAG+
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIG 466
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYA 504
EAK ++MP +P A W +LL+ CRIH ++L + AE+L + PE+ Y++LSN+YA
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYA 526
Query: 505 HLGKWDEVARVRKLMRERGVKKEPGCSWIEI 535
G W+ V VR+ M +G +K G S E+
Sbjct: 527 DAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 201/502 (40%), Gaps = 78/502 (15%)
Query: 29 HCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDE 88
H QQ+H V+ G + ++L + YI S F+ P +++
Sbjct: 22 HTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSS---------FNRIPCWKRNR 72
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 148
SW T+++GY ++ + Y + + +M
Sbjct: 73 HSWNTILSGYSKS-----------------------------KTCCYSDVLLLYNRMRRH 103
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
+D + I A GL G +H ++ + ++ V +L+ Y + G
Sbjct: 104 CDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY----VAPSLVEMYAQLGT 159
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
+ A++VFD++PVR+ V W ++ GY+ + E +FR
Sbjct: 160 MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPE---VFR-------------------- 196
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSA 327
LF M+ GL +KACG + + G+ +H I+ D S
Sbjct: 197 --------LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
++I MY KC ++ A +F T + V W +I+ A+ R V+A L+ QML+E I
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
LP++ T IL +CS G ++ G+ M + G+ ++ ID+ R G A+
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TYIILSNMYAHL 506
V + MP E + W S++ I+G E + ++ + T++ L + +H
Sbjct: 368 TVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 507 GKWDEV-ARVRKLMRERGVKKE 527
G E + + R+ GV E
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPE 448
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 141/289 (48%), Gaps = 15/289 (5%)
Query: 192 ILSVNNA--LITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKF 245
+L VN A L+T ++ L ++V K+ + ++V +++ + YI + RL+ A
Sbjct: 1 MLPVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATS 60
Query: 246 IFREVP--ERNLLTWTVMISGLAESGFG--EESLKLFNQMKS--EGLEPCDYAYAGAIKA 299
F +P +RN +W ++SG ++S + L L+N+M+ +G++ + +A IKA
Sbjct: 61 SFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKA 118
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
C LG L+NG IH ++ G D +L+ MYA+ G + A VF +P +SV W
Sbjct: 119 CVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLW 178
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
++ ++ + + +L+ M + D +T + ++ AC + K G+
Sbjct: 179 GVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIR 238
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ + A +ID+ + A+K+ E+ + + +W +L++G
Sbjct: 239 RSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISG 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
+ D ++T+ I Y R ++ AR + D M ++W++MI+ + +GL+EEA D F K
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT--VVQPSEHFILSVNNALITF 202
M S + + T+ SL+SA ++G G + + R VV EH+ ++
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYA-----CMVDL 458
Query: 203 YTKCGKLVQAREVFDKMPVRDLVS-WNAILSG 233
+ G++ +A+ D MPV+ + S W A+LS
Sbjct: 459 LGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 272/531 (51%), Gaps = 24/531 (4%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ G + + +TV+ A S + W C+ L +K + V LL Y C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGI-WDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC- 221
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+ + ARKLFDE P +++ +W M+ GY + + A +L D +T V
Sbjct: 222 --------LCLKDARKLFDEMP--ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV 271
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+W MI G +R +EA + +M G++ E L+SAS + + G QLH
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHG-- 329
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
T+V+ + +I FY + A + F+ + S NA+++G++ +
Sbjct: 330 --TIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMV 387
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKA 299
E+A+ +F + ++++ +W MISG A+S + +L LF +M S ++P A
Sbjct: 388 EQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 447
Query: 300 CGVLGSLDNGQQIHS--QVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
LGSL+ G++ H + + +L+A A+I MYAKCG + A +F + S
Sbjct: 448 ISSLGSLEEGKRAHDYLNFSTIPPNDNLTA--AIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 358 S---WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+ WNA+I A HG A+ LY + I P+ ITF+ +LSAC HAGLV+ G+ YF
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF 565
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+SM + +G+ P HY ++DLL +AG+ EAK++ + MP + IW LL+ R HGN
Sbjct: 566 ESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Query: 475 IELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
+E+ AA L + P G ++LSN+YA G+W++VA VR+ MR R V+
Sbjct: 626 VEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 236/485 (48%), Gaps = 54/485 (11%)
Query: 31 QQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLF-DEAPLSQKDEP 89
+Q+HC V+K G+ + N++L+ Y C L+A A +F D A L D
Sbjct: 61 RQIHCRVLKSGLDSNGYICNSVLNMYAKCR---------LLADAESVFRDHAKL---DSA 108
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 149
S+ M+ GYVR+ L A KL D M V++ +I GY ++ + EA + FR+M ++G
Sbjct: 109 SFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG 168
Query: 150 IQMDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
I ++E T ++ISA S G+++C R L + ++ ++ + V+ L+ Y C
Sbjct: 169 IMLNEVTLATVISACSHLGGIWDC-RMLQSLAIKLKLEGR----VFVSTNLLHMYCLCLC 223
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES 268
L AR++FD+MP R+LV+WN +L+GY A +E+A+ +F ++ E+++++W MI G
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD------ 322
+E+L + +M G++P + + A G Q+H +++ G D
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 323 -------------------------SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
+++ NALI + K G+V A VF D
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKED-ILPDRITFLTILSACSHAGLVKEGQHYFDS 416
SWNAMI+ AQ A+ L+ +M+ + PD IT +++ SA S G ++EG+ D
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI--WESLLAGCRIHGN 474
+ + P ++ A +ID+ + G A + S+ I W +++ G HG+
Sbjct: 464 L-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 475 IELGI 479
+L +
Sbjct: 523 AKLAL 527
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 148/289 (51%), Gaps = 12/289 (4%)
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
E S + + ++ CGRQ+H VL++ + + + + N+++ Y KC L A
Sbjct: 41 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGY----ICNSVLNMYAKCRLLADAE 96
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
VF D S+N ++ GY+ +RRL +A +F +PER+ +++T +I G A++ E
Sbjct: 97 SVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSE 156
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
+++LF +M++ G+ + A I AC LG + + + + S I+L + + L+
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
MY C + A +F MP + V+WN M+ ++ G QA +L++Q+ ++DI ++
Sbjct: 217 MYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VS 272
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGK 442
+ T++ C + E Y+ M GM P E ++DLL + +
Sbjct: 273 WGTMIDGCLRKNQLDEALVYYTEM-LRCGMKPSE---VMMVDLLSASAR 317
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 243/445 (54%), Gaps = 41/445 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGI 150
+T+ Y N + AR++ D M P + W A++S + ++ LYEEA F MH G+
Sbjct: 202 STLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGL 261
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
D T+ ++++A N G+++H ++ + + + V ++L+ Y KCG +
Sbjct: 262 VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSN----VVVESSLLDMYGKCGSVR 317
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+AR+VF+ M ++N ++W+ ++ G ++G
Sbjct: 318 EARQVFNGMS-------------------------------KKNSVSWSALLGGYCQNGE 346
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
E+++++F +M+ + L Y + +KAC L ++ G++IH Q ++ G ++ +A
Sbjct: 347 HEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA 402
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI +Y K G + A V+ M + ++WNAM++ALAQ+GRG +A+ + M+K+ I PD
Sbjct: 403 LIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPD 462
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
I+F+ IL+AC H G+V EG++YF M YG+ PG +HY+ +IDLL RAG F EA+ +
Sbjct: 463 YISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNI-ELGIQAAERLFELTPEQDGTYIILSNMYAHLGKW 509
E A +W LL C + + + + A+R+ EL P+ +Y++LSNMY +G+
Sbjct: 523 ERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRH 582
Query: 510 DEVARVRKLMRERGVKKEPGCSWIE 534
+ +RKLM RGV K G SWI+
Sbjct: 583 GDALNIRKLMVRRGVAKTVGQSWID 607
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 165/363 (45%), Gaps = 43/363 (11%)
Query: 133 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 192
G EA HS I Y SL+ F G Q HA+V+++ ++ +
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN-- 97
Query: 193 LSVNNALITFYTKCGK-LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 251
V N+L++ Y K G + + R VFD V+D +SW +++SGY+ + E K
Sbjct: 98 --VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGK--EHVK------- 146
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
+L++F +M S GL+ ++ + A+KAC LG + G+
Sbjct: 147 ----------------------ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
H VI G + + + L +Y A VF MP D + W A+++A +++
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 372 GVQAIQLYEQMLK-EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+A+ L+ M + + ++PD TF T+L+AC + +K+G+ + T+ G+
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVE 303
Query: 431 ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTP 490
+ L+D+ + G EA++V M + S W +LL G +G E I+ +F
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVS-WSALLGGYCQNGEHEKAIE----IFREME 358
Query: 491 EQD 493
E+D
Sbjct: 359 EKD 361
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 245/477 (51%), Gaps = 36/477 (7%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
DE + ++ Y + D L AR++ M VAWN+MI GYV G + + +M
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G + + T TS++ A + G+ +H YV+R+VV + VN +LI Y KC
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD----IYVNCSLIDLYFKC 357
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G+ A VF K ++V E +W VMIS
Sbjct: 358 GEANLAETVFSKTQ---------------------------KDVAE----SWNVMISSYI 386
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
G +++++++QM S G++P + + AC L +L+ G+QIH + + ++
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
+AL+ MY+KCG A +F ++P D VSW MI+A HG+ +A+ +++M K
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
+ PD +T L +LSAC HAGL+ EG +F M + YG+ P +HY+ +ID+L RAG+ EA
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 447 KKVTESMP-FEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAH 505
++ + P +A + +L + C +H LG + A L E P+ TY++L N+YA
Sbjct: 567 YEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYAS 626
Query: 506 LGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
WD RVR M+E G++K+PGCSWIE+ + V F +D H VY+ L L
Sbjct: 627 GESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 217/529 (41%), Gaps = 93/529 (17%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGM-THPIAVAWNAMISGYVRHGLYEEAFDTFR 143
++D ++I Y D SAR + + WN+++SGY ++ ++ + + F+
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 144 KMHSMGIQM-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
++ + I + D +T+ ++I A G GR +H V+++
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGY----------------- 138
Query: 203 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 262
V D+V ++++ Y E + +F E+PER++ +W +I
Sbjct: 139 ------------------VCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
S +SG E++L+LF +M+S G EP + AI AC L L+ G++IH + ++ G +
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
+AL+ MY KC + A VF MP V+WN+MI G +++ +M
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 383 LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR--LIDLLCRA 440
+ E P + T +IL ACS + + G+ + D Y LIDL +
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS---VVNADIYVNCSLIDLYFKC 357
Query: 441 GK-------FSEAKK-VTE--------------------------SMPFEPSAPIWESLL 466
G+ FS+ +K V E S+ +P + S+L
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 467 AGCRIHGNIELGIQAAERLFELTPEQDGTYI-ILSNMYAHLGKWDEVARVRKLMRERGVK 525
C +E G Q + E E D + L +MY+ G E R+ +
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN-----SIP 472
Query: 526 KEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPD 574
K+ SW V + P A+Y++ EM+K G PD
Sbjct: 473 KKDVVSWT-----VMISAYGSHGQPR-EALYQF-----DEMQKFGLKPD 510
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 290/578 (50%), Gaps = 90/578 (15%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLI---AEEEWHCQQ--LHCDVVKWGVMCVPSVLNTLLSC 55
MK+ P F ++ + LI + C+ LH +V G+ + + L++
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 56 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT 115
Y+ C + ARK+FDE P ++D I+G V
Sbjct: 61 YVECGK---------VLDARKVFDEMP--KRD-------ISGCV---------------- 86
Query: 116 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
MI R+G Y+E+ D FR+M+ G+++D + SL+ AS N G+
Sbjct: 87 --------VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
+H VL+ + S+ FI+S +LI Y+K G++ AR+VF + +DLV +NA++SGY
Sbjct: 139 IHCLVLKFSYE-SDAFIVS---SLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYA 194
Query: 236 NARRLEEAKFIFREV------PE--------------RN-------------------LL 256
N + +EA + +++ P+ RN ++
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVV 254
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
+WT +ISGL + E++ F QM + GL P + AC L + +G++IH
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYS 314
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
+ G + +AL+ MY KCG + A ++F P +V++N+MI A HG +A+
Sbjct: 315 VVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAV 374
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDL 436
+L++QM D +TF IL+ACSHAGL GQ+ F M Y + P +HYA ++DL
Sbjct: 375 ELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDL 434
Query: 437 LCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTY 496
L RAGK EA ++ ++M EP +W +LLA CR HGN+EL AA+ L EL PE G
Sbjct: 435 LGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNG 494
Query: 497 IILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
++L+++YA+ G W+ V R++K+++++ ++ G SW+E
Sbjct: 495 LLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 7/254 (2%)
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
+Y I+A G G+ +H+ ++ G L+T Y +CG V A VF M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
P D MI A A++G +++ + +M K+ + D ++L A S L +E
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFG 136
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
+ + + LID+ + G+ A+KV + E ++ ++++G
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYAN 195
Query: 472 HGNIE--LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPG 529
+ + L + +L + P+ T+ L + ++H+ ++V+ + +LM G K +
Sbjct: 196 NSQADEALNLVKDMKLLGIKPDVI-TWNALISGFSHMRNEEKVSEILELMCLDGYKPDV- 253
Query: 530 CSWIE-IENMVHVF 542
SW I +VH F
Sbjct: 254 VSWTSIISGLVHNF 267
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 234/466 (50%), Gaps = 40/466 (8%)
Query: 76 KLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLY 135
KL +E L K E ++ Y++ + AR + D M + W MI+GY G
Sbjct: 242 KLVEEKRLGDKIEVK-NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300
Query: 136 EEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSV 195
E A + R M G++ + T SL+S + N G+ LH + +R V + +
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD----III 356
Query: 196 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 255
+LI+ Y KC +R++ +F + +
Sbjct: 357 ETSLISMYAKC-------------------------------KRVDLCFRVFSGASKYHT 385
Query: 256 LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQ 315
W+ +I+G ++ ++L LF +M+ E +EP + A L L IH
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM----PYVDSVSWNAMIAALAQHGR 371
+ + G SSL A L+ +Y+KCG + A +F + D V W A+I+ HG
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
G A+Q++ +M++ + P+ ITF + L+ACSH+GLV+EG F M HY +HY
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPE 491
++DLL RAG+ EA + ++PFEP++ +W +LLA C H N++LG AA +LFEL PE
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPE 625
Query: 492 QDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIEN 537
G Y++L+N+YA LG+W ++ +VR +M G++K+PG S IEI +
Sbjct: 626 NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 193/441 (43%), Gaps = 42/441 (9%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+D+ ++A Y+ + AR + D M + ++WN MISGY R+G +A F M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
+ + +D T S++ + GR +H V + + V NAL+ Y K
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK----IEVKNALVNMYLK 265
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
CG++ +AR VFD+M RD+++W T MI+G
Sbjct: 266 CGRMDEARFVFDRMERRDVITW-------------------------------TCMINGY 294
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
E G E +L+L M+ EG+ P A + CG +++G+ +H ++ S +
Sbjct: 295 TEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDI 354
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
+LI+MYAKC V VF + W+A+IA Q+ A+ L+++M +E
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
D+ P+ T ++L A + +++ + T G D L+ + + G
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 446 AKKVTESMPFEPSAP---IWESLLAGCRIHGNIELGIQAAERLFE--LTPEQDGTYIILS 500
A K+ + + + +W +L++G +HG+ +Q + +TP + T+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI-TFTSAL 532
Query: 501 NMYAHLGKWDEVARVRKLMRE 521
N +H G +E + + M E
Sbjct: 533 NACSHSGLVEEGLTLFRFMLE 553
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 49/385 (12%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+T+ Y + ARKL + M +++N +I YVR GLY +A F +M S G++
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 152 M--DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
D YTY + A+ G +H +LR+
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFG----------------------- 149
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
RD NA+L+ Y+N ++E A+ +F + R++++W MISG +G
Sbjct: 150 ------------RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
+ ++L +F+ M +E ++ + CG L L+ G+ +H V + + N
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
AL+ MY KCG + A VF M D ++W MI + G A++L M E + P
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP 317
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
+ +T +++S C A V +G+ C H G + Y+ +I +++ K+V
Sbjct: 318 NAVTIASLVSVCGDALKVNDGK------CLH-GWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 450 TESMPFEPSAPI-----WESLLAGC 469
A W +++AGC
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGC 395
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 8/242 (3%)
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE--PCDYAYAGAIKAC 300
A+ +F E+P+ +LL++ ++I G +++ +F +M SEG++ P Y Y KA
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAA 127
Query: 301 GVLGSLDNGQQIHSQVIQ--LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
G L S+ G +H ++++ G D + NAL+ MY G V A VF M D +S
Sbjct: 128 GELKSMKLGLVVHGRILRSWFGRDKYVQ--NALLAMYMNFGKVEMARDVFDVMKNRDVIS 185
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
WN MI+ ++G A+ +++ M+ E + D T +++L C H ++ G++ +
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN-VHKLV 244
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG 478
+ + L+++ + G+ EA+ V + M W ++ G G++E
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVENA 303
Query: 479 IQ 480
++
Sbjct: 304 LE 305
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 162/576 (28%), Positives = 280/576 (48%), Gaps = 21/576 (3%)
Query: 2 KRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 61
++D D F+ +T++ +S ++ +QLH +VK G +++L+ Y C
Sbjct: 117 EKDDIWIDDFTVTTMV-KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGK 175
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP---I 118
+F+ + + D + MIA Y R D+ A + +P
Sbjct: 176 ---------FKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVF--WRNPELND 224
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
++WN +I+GY ++G EEA M G++ DE+++ ++++ + G+++HA
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
VL+ ++ V++ ++ Y KCG + A +L S ++++ GY +
Sbjct: 285 RVLKNGSYSNKF----VSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ-MKSEGLEPCDYAYAGAI 297
++ EAK +F + E+NL+ WT M G + L+L + +E P +
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVL 400
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
AC + ++ G++IH ++ G A + MY+KCG V YA+ +F + D+V
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV 460
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
+NAMIA A HG ++ Q +E M + PD ITF+ +LSAC H GLV EG+ YF SM
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSM 520
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP-FEPSAPIWESLLAGCRIHGNIE 476
Y ++P HY +IDL +A + +A ++ E + E A I + L C + N E
Sbjct: 521 IEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
L + E+L + YI ++N YA G+WDE+ R+R MR + ++ GCSW I+
Sbjct: 581 LVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANID 640
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYI 572
H+F D H E A+Y L + ++ ++ I
Sbjct: 641 KQFHMFTSSDISHYETEAIYAMLHFVTKDLSEIDEI 676
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 225/458 (49%), Gaps = 48/458 (10%)
Query: 70 LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISG 128
L+ AR +FDE + +++ SW +IA YV+ +++ AR+L + + +N ++SG
Sbjct: 38 LLREARNVFDE--MLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSG 95
Query: 129 YVR-HGLYEEAFDTFRKMHSM---GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV 184
+ + G EA + F +MH I +D++T T+++ S G QLH +++T
Sbjct: 96 FAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTG 155
Query: 185 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--DLVSWNAILSGYINARRLEE 242
++ + ++LI Y+KCGK + +F+ V D V+ NA+++ Y +++
Sbjct: 156 NDGTKFAV----SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDK 211
Query: 243 AKFIFREVPERN-LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
A +F PE N ++W +I+G A++G+ EE+LK+ M+ GL+ ++++ +
Sbjct: 212 ALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLS 271
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
L SL G+++H++V++ G S+ + ++ +Y KCG + YA+ L + + S ++
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASS 331
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDIL--------------------------------P 389
MI + G+ V+A +L++ + +++++ P
Sbjct: 332 MIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTP 391
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
D + +++L ACS ++ G+ G+ + +D+ + G A+++
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKE-IHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+S FE ++ +++AGC HG+ Q E + E
Sbjct: 451 FDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 142/261 (54%), Gaps = 11/261 (4%)
Query: 196 NNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFR-EVPERN 254
+N L+ Y+K G L +AR VFD+M R++ SWNA+++ Y+ ++EA+ +F + ER+
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERD 85
Query: 255 LLTWTVMISGLAES-GFGEESLKLFNQMKSEGLEPC---DYAYAGAIKACGVLGSLDNGQ 310
L+T+ ++SG A++ G E++++F +M + + D+ +K L ++ G+
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF--LTMPYVDSVSWNAMIAALAQ 368
Q+H +++ G+D + A ++LI MY+KCG +F + +VDSV+ NAMIAA +
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
G +A+ ++ + L D I++ T+++ + G +E SM G+ E
Sbjct: 206 EGDIDKALSVF---WRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM-EENGLKWDEH 261
Query: 429 HYARLIDLLCRAGKFSEAKKV 449
+ ++++L K+V
Sbjct: 262 SFGAVLNVLSSLKSLKIGKEV 282
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 231/448 (51%), Gaps = 44/448 (9%)
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHS- 147
PS T+++ Y + + AR++ + + V WNA++S YV +G+ +EAF + M S
Sbjct: 179 PS-TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSD 237
Query: 148 -MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
+ D +T++SL+SA G+Q+HA + + Q F + V AL+ Y K
Sbjct: 238 KNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQ----FDIPVATALLNMYAKS 289
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
L ARE F + RN+++W MI G A
Sbjct: 290 NHLSDAREC-------------------------------FESMVVRNVVSWNAMIVGFA 318
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
++G G E+++LF QM E L+P + +A + +C ++ +Q+ + V + G LS
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
N+LI+ Y++ G + A + F ++ D VSW ++I ALA HG +++Q++E ML++
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK- 437
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
+ PD+ITFL +LSACSH GLV+EG F M Y + ++HY LIDLL RAG EA
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEA 497
Query: 447 KKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHL 506
V SMP EPS + GC IH E A++L E+ P + Y ILSN Y
Sbjct: 498 SDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSE 557
Query: 507 GKWDEVARVRKLMRERGVK-KEPGCSWI 533
G W++ A +RK R K PGCSW+
Sbjct: 558 GHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/533 (24%), Positives = 222/533 (41%), Gaps = 92/533 (17%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH------- 146
++ Y + + A KL D M V WN +I HG+ + DT + H
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILI-----HGVIQRDGDTNHRAHLGFCYLS 131
Query: 147 ---SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
+ +D ++ LI ++ G QLH +++ ++ S + +L+ FY
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS----CFPSTSLVHFY 187
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
KCG +V+AR VF+ V +R+L+ W ++S
Sbjct: 188 GKCGLIVEARRVFEA-------------------------------VLDRDLVLWNALVS 216
Query: 264 GLAESGFGEESLKLFNQMKSEG--LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH 321
+G +E+ L M S+ + ++ + AC + + G+QIH+ + ++ +
Sbjct: 217 SYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRI----EQGKQIHAILFKVSY 272
Query: 322 DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
+ AL+ MYAK + A F +M + VSWNAMI AQ+G G +A++L+ Q
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 382 MLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAG 441
ML E++ PD +TF ++LS+C+ + E + +M T G LI R G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQ-VQAMVTKKGSADFLSVANSLISSYSRNG 391
Query: 442 KFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSN 501
SEA S+ EP W S++ HG E +Q E + + T++ + +
Sbjct: 392 NLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLS 450
Query: 502 MYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQ 561
+H G E R K M E IE E+ + L+D
Sbjct: 451 ACSHGGLVQEGLRCFKRMTE--------FYKIEAEDEHYTCLID---------------- 486
Query: 562 LVIEMRKLGYIPDTKFVLHDMESEHKEHALST-------HSEKLAVVYGILKL 607
+ + G+I + VL+ M +E HAL+ H ++ ++ +G KL
Sbjct: 487 ---LLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKL 536
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 37/269 (13%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
Q D P T ++ Y +++ L+ AR+ + M V+WNAMI G+ ++G EA F +
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
M +Q DE T+ S++S+ +Q+ A V + + S F LSV N+LI+ Y+
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK---KGSADF-LSVANSLISSYS 388
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
+ G L +A F + DLVS WT +I
Sbjct: 389 RNGNLSEALLCFHSIREPDLVS-------------------------------WTSVIGA 417
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DS 323
LA GF EESL++F M + L+P + + AC G + G + ++ + ++
Sbjct: 418 LASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA 476
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMP 352
LI + + G + A V +MP
Sbjct: 477 EDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 48/321 (14%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL----------AESGFGEESLKL 277
N +L Y R ++A +F E+P RN++TW ++I G+ A GF S L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F + + + ++ G I+ C ++ G Q+H +++ G +SS +L+ Y K
Sbjct: 135 FTDVSLDHV-----SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM--LKEDILPDRITFL 395
CG++ A VF + D V WNA++++ +G +A L + M K D TF
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFS 249
Query: 396 TILSACS-------HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
++LSAC HA L K + + T L+++ ++ S+A++
Sbjct: 250 SLLSACRIEQGKQIHAILFKVSYQFDIPVAT------------ALLNMYAKSNHLSDARE 297
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF------ELTPEQDGTYIILSNM 502
ESM W +++ G +G + A RLF L P++ +LS+
Sbjct: 298 CFESMVVRNVVS-WNAMIVGFAQNGE----GREAMRLFGQMLLENLQPDELTFASVLSSC 352
Query: 503 YAHLGKWDEVARVRKLMRERG 523
W E+ +V+ ++ ++G
Sbjct: 353 AKFSAIW-EIKQVQAMVTKKG 372
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 233/452 (51%), Gaps = 36/452 (7%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
A +L+ + P N++I Y E A FR+M + D+Y++T ++ A
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS 226
F GRQ+H +++ + + V N L+ Y + G AR+V D+MPVRD VS
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTD----VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 227 WNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES------------ 274
WN++LS Y+ ++EA+ +F E+ ERN+ +W MISG A +G +E+
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 275 -------------------LKLFNQMKSEGLE-PCDYAYAGAIKACGVLGSLDNGQQIHS 314
L++FN+M + E P + + AC LGSL G+ +H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 315 QVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQ 374
+ + G + AL+ MY+KCG + A VF D +WN++I+ L+ HG G
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 375 AIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLI 434
A++++ +M+ E P+ ITF+ +LSAC+H G++ + + F+ M + Y + P +HY ++
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMV 448
Query: 435 DLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG 494
DLL R GK EA+++ +P + ++ + ESLL C+ G +E + A RL EL
Sbjct: 449 DLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSS 508
Query: 495 TYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
Y +SN+YA G+W++V R+ MR V +
Sbjct: 509 GYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 186/402 (46%), Gaps = 63/402 (15%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLL-----SCYICCASS 62
PD +SF+ VL A + E +Q+H +K G++ V NTL+ S Y A
Sbjct: 138 PDKYSFTFVLKACAAFCGFE-EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARK 196
Query: 63 TLVESPV-----------------LMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLA 105
L PV L+ AR LFDE + +++ SW MI+GY +
Sbjct: 197 VLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE--MEERNVESWNFMISGYAAAGLVK 254
Query: 106 SARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM-DEYTYTSLISAS 164
A+++ D M V+WNAM++ Y G Y E + F KM + D +T S++SA
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 224
+ G + G +H Y+ + ++ E F+ + AL+ Y+KCGK+ +A EVF RD+
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEI-EGFLAT---ALVDMYSKCGKIDKALEVFRATSKRDV 370
Query: 225 VSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSE 284
+WN+I IS L+ G G+++L++F++M E
Sbjct: 371 STWNSI-------------------------------ISDLSVHGLGKDALEIFSEMVYE 399
Query: 285 GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALITMYAKCGVVGY 343
G +P + G + AC +G LD +++ + + + ++ ++ + + G +
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 344 ADMVFLTMPYVD-SVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
A+ + +P + S+ +++ A + G+ QA ++ ++L+
Sbjct: 460 AEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLE 501
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 305 SLDNGQQIHSQVIQLG--HDS-SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNA 361
SL QQ H+ +++ G HD+ S S A + V YA + + + + N+
Sbjct: 51 SLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNS 110
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHY 421
+I A A A+ ++ +ML + PD+ +F +L AC+ +EG+ +
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ-IHGLFIKS 169
Query: 422 GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG--- 478
G+ L+++ R+G F A+KV + MP A W SLL+ G ++
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSAYLEKGLVDEARAL 228
Query: 479 ------------------------IQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVA 513
++ A+ +F+ P +D ++ + YAH+G ++EV
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 514 RVRKLMRERGVKKEPGCSWIEI 535
V M + +K G + + +
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSV 310
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 225/421 (53%), Gaps = 7/421 (1%)
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
N + Y+ ++A + + G D YT+ SLIS T + G+ H ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE 242
+L V N+L+ YT CG L A+++F ++P RD+VSWN+I++G + +
Sbjct: 147 HGCDQ----VLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
A +F E+P++N+++W +MIS + S+ LF +M G + + + ACG
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
L G+ +H+ +I+ +SS+ ALI MY KC VG A +F ++ + V+WN M
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
I A HGR ++L+E M+ + PD +TF+ +L C+ AGLV +GQ Y+ M +
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGI 479
+ P H + +L AG EA++ +++P E P + W +LL+ R GN LG
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
A+ L E P Y +L N+Y+ G+W++V RVR++++ER + + PGC ++++ +V
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Query: 540 H 540
H
Sbjct: 503 H 503
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 169/404 (41%), Gaps = 70/404 (17%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHC-----QQLHCDVVKWGVMCVPSVLNTLLSCYI 57
R GF PD ++F +SLI+ E C + H +K G V V N+L+ Y
Sbjct: 111 RFGFVPDSYTF------VSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYT 164
Query: 58 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP 117
CC + L A+KLF E P ++D SW ++IAG VRN D+ +A KL D M
Sbjct: 165 CCGALDL---------AKKLFVEIP--KRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK 213
Query: 118 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH 177
++WN MIS Y+ + FR+M G Q +E T L++A + GR +H
Sbjct: 214 NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 178 AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
A ++RT + S + ++ ALI Y KC ++ AR +FD + +R+ V+WN
Sbjct: 274 ASLIRTFLNSS----VVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWN--------- 320
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI 297
VMI G E L+LF M + L P + + G +
Sbjct: 321 ----------------------VMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVL 358
Query: 298 KACGVLGSLDNGQQIHSQVI-------QLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
C G + GQ +S ++ GH ++ +Y+ G A+
Sbjct: 359 CGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA------NLYSSAGFPEEAEEALKN 412
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
+P D + A L R L E + K I D + +
Sbjct: 413 LPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/432 (34%), Positives = 232/432 (53%), Gaps = 20/432 (4%)
Query: 114 MTHPIAVAWNAMISGYVRH---GLYEEAFDTFRKMHSMGIQMDEYTYTSLISA--SFNTG 168
+T+P +N +I H L + F F +M + D +T+ + A + G
Sbjct: 74 ITNPSTFCFNTIIRICTLHEPSSLSSKRF--FVEMRRRSVPPDFHTFPFVFKACAAKKNG 131
Query: 169 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 228
+ LH LR + S+ F L N LI Y+ + A ++FD+ P RD+V++N
Sbjct: 132 DLTLVKTLHCQALRFGLL-SDLFTL---NTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 229 AILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
++ G + AR + A+ +F +P R+L++W +ISG A+ E++KLF++M + GL+P
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIH--SQVIQLGHDSSLSAGNALITMYAKCGVVGYADM 346
+ A + AC G G+ IH ++ +L DS L+ G L+ YAKCG + A
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG--LVDFYAKCGFIDTAME 305
Query: 347 VFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGL 406
+F +WNAMI LA HG G + + +M+ I PD +TF+++L CSH+GL
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 407 VKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP----IW 462
V E ++ FD M + Y + HY + DLL RAG EA ++ E MP + W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 463 ESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLM-RE 521
LL GCRIHGNIE+ +AA R+ L+PE G Y ++ MYA+ +W+EV +VR+++ R+
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 522 RGVKKEPGCSWI 533
+ VKK G S +
Sbjct: 486 KKVKKNVGFSKV 497
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 165/378 (43%), Gaps = 55/378 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWH-CQQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M+R PD +F V A + + + LHC +++G++ LNTL+ Y
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIA 119
A P+ SA +LFDE P Q+D ++ +I G V+ ++ AR+L D M
Sbjct: 166 A-------PI--DSALQLFDENP--QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDL 214
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
V+WN++ISGY + EA F +M ++G++ D S +SA +G + G+ +H Y
Sbjct: 215 VSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDY 274
Query: 180 VLRTVVQPSEHFILS-VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINAR 238
R + FI S + L+ FY KCG + A E+F+ + L +WNA
Sbjct: 275 TKRKRL-----FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNA--------- 320
Query: 239 RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
MI+GLA G GE ++ F +M S G++P + +
Sbjct: 321 ----------------------MITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 299 ACGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS- 356
C G +D + + Q+ L + + + + + G++ A + MP
Sbjct: 359 GCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGN 418
Query: 357 ----VSWNAMIAALAQHG 370
++W+ ++ HG
Sbjct: 419 REKLLAWSGLLGGCRIHG 436
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 237/454 (52%), Gaps = 46/454 (10%)
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
++W +I+GY ++ + EA + FR + +++DE S++ AS +++H +
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 180 VLR-----TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGY 234
+LR TV+Q N L+ Y KC + A VF+ + +D
Sbjct: 513 ILRKGLLDTVIQ----------NELVDVYGKCRNMGYATRVFESIKGKD----------- 551
Query: 235 INARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYA 294
+++WT MIS A +G E+++LF +M GL A
Sbjct: 552 --------------------VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
+ A L +L+ G++IH +++ G S A++ MYA CG + A VF +
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 651
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+ + +MI A HG G A++L+++M E++ PD I+FL +L ACSHAGL+ EG+ +
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
M Y + P +HY L+D+L RA EA + + M EP+A +W +LLA CR H
Sbjct: 712 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771
Query: 475 IELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
E+G AA+RL EL P+ G +++SN++A G+W++V +VR M+ G++K PGCSWIE
Sbjct: 772 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Query: 535 IENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
++ VH F D HPE +Y+ L ++ ++ +
Sbjct: 832 MDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 201/419 (47%), Gaps = 60/419 (14%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHP-IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGI 150
+++ Y +NDDL++AR+L DG AV WN+++S Y G E + FR+MH G
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ YT S ++A G+++HA VL++ SE L V NALI YT+CGK+
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE---LYVCNALIAMYTRCGKMP 337
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
QA + +M D+V+WN+++ GY+ +NL+
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYV-----------------QNLMY------------- 367
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+E+L+ F+ M + G + + + I A G L +L G ++H+ VI+ G DS+L GN
Sbjct: 368 -KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI MY+KC + Y FL M D +SW +IA AQ+ V+A++L+ + K+ + D
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 486
Query: 391 RITFLTILSACS-----------HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCR 439
+ +IL A S H ++++G D++ + L+D+ +
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQN-----------ELVDVYGK 533
Query: 440 AGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYII 498
A +V ES+ + W S+++ ++GN ++ R+ E D ++
Sbjct: 534 CRNMGYATRVFESIKGKDVVS-WTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 591
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 37/305 (12%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + L A K+ D M A AWN MI YV +G A + M G+ + ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+L+ A G +LH+ +++ S FI+ NAL++ Y K L AR +FD
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIV---NALVSMYAKNDDLSAARRLFD 241
Query: 218 KMPVR-DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
+ D V WN+ILS Y + SG E+L+
Sbjct: 242 GFQEKGDAVLWNSILSSY-------------------------------STSGKSLETLE 270
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG-HDSSLSAGNALITMY 335
LF +M G P Y A+ AC G++IH+ V++ H S L NALI MY
Sbjct: 271 LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 336 AKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFL 395
+CG + A+ + M D V+WN++I Q+ +A++ + M+ D ++
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 396 TILSA 400
+I++A
Sbjct: 391 SIIAA 395
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 40/299 (13%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
GRQLH+ + +T F+ L+ Y KCG L A +VFD+M
Sbjct: 99 GRQLHSRIFKTFPSFELDFLA---GKLVFMYGKCGSLDDAEKVFDEM------------- 142
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
P+R W MI +G +L L+ M+ EG+ +
Sbjct: 143 ------------------PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
+ +KAC L + +G ++HS +++LG+ S+ NAL++MYAK + A +F
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 353 YV-DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
D+V WN+++++ + G+ ++ ++L+ +M P+ T ++ L+AC K G+
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 412 HYFDSMCTHYGMTPGEDHYA--RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
S+ T + Y LI + R GK +A+++ M W SL+ G
Sbjct: 305 EIHASVLK--SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG 360
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 11/234 (4%)
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS-AGNALITMYAKCGVV 341
SE P + A+A ++ CG ++ G+Q+HS++ + L L+ MY KCG +
Sbjct: 74 SENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSL 132
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
A+ VF MP + +WN MI A +G A+ LY M E + +F +L AC
Sbjct: 133 DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 192
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
+ ++ G S+ G L+ + + S A+++ + + A +
Sbjct: 193 AKLRDIRSGSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 462 WESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNM-------YAHLGK 508
W S+L+ G L R +T +Y I+S + YA LGK
Sbjct: 252 WNSILSSYSTSGK-SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 248/478 (51%), Gaps = 38/478 (7%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+++ Y +D L A K+ D M P ++WN+++SGYV+ G ++E F ++H +
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+E+++T+ ++A L G +H+ +++ ++ + V N LI Y KCG +
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGN---VVVGNCLIDMYGKCGFMDD 210
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLT-------------- 257
A VF M +D VSWNAI++ +LE + F ++P + +T
Sbjct: 211 AVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDF 270
Query: 258 -----------------WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
W +++G S E+ + F +M S G+ +Y+ + + A
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAV 330
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
L + G IH+ +LG DS + +ALI MY+KCG++ +A+++F TMP + + WN
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWN 390
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDIL-PDRITFLTILSACSHAGLVKEGQ-HYFDSMC 418
MI+ A++G ++AI+L+ Q+ +E L PDR TFL +L+ CSH + E YF+ M
Sbjct: 391 EMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMI 450
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG 478
Y + P +H LI + + G+ +AK+V + F W +LL C +++
Sbjct: 451 NEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAA 510
Query: 479 IQAAERLFEL--TPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
A ++ EL + + YI++SN+YA+ +W EV ++RK+MRE GV KE G SWI+
Sbjct: 511 KTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 143/324 (44%), Gaps = 83/324 (25%)
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS---VNNALITFYTK 205
G + D L+ S N G + RQLH YV ++H +S ++N+L+ FY
Sbjct: 50 GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV-------TKHGFVSNTRLSNSLMRFYKT 102
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
L A +VFD+MP D++SWN+++SGY+ + R +E +F E+ ++
Sbjct: 103 SDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF--------- 153
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG-HDSS 324
P ++++ A+ AC L G IHS++++LG +
Sbjct: 154 ----------------------PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGN 191
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
+ GN LI MY KCG + A +VF M D+VSWNA++A+ +++G+ + + QM
Sbjct: 192 VVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN 251
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
PD +T Y LID ++G F+
Sbjct: 252 ----PDTVT------------------------------------YNELIDAFVKSGDFN 271
Query: 445 EAKKVTESMPFEPSAPIWESLLAG 468
A +V MP P++ W ++L G
Sbjct: 272 NAFQVLSDMP-NPNSSSWNTILTG 294
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
+W+ ++ LA G L+ ++ ++G +P ++ G G + +Q+H V
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
+ G S+ N+L+ Y + A VF MP D +SWN++++ Q GR + I
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR-LID 435
L+ ++ + D+ P+ +F L+AC+ L G S G+ G LID
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGA-CIHSKLVKLGLEKGNVVVGNCLID 200
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG- 494
+ + G +A V + M E W +++A C +G +ELG+ F P D
Sbjct: 201 MYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLW----FFHQMPNPDTV 255
Query: 495 TYIILSNMYAHLGKWDEVARV 515
TY L + + G ++ +V
Sbjct: 256 TYNELIDAFVKSGDFNNAFQV 276
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 226/448 (50%), Gaps = 40/448 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y++ DD A+A + D M V+W AMISG V + YE D FR M ++
Sbjct: 189 TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR 248
Query: 152 MDEYTYTSLISA--SFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
+ T S++ A N G + +++H + R E + A +T Y +CG +
Sbjct: 249 PNRVTLLSVLPACVELNYG-SSLVKEIHGFSFRHGCHADER----LTAAFMTMYCRCGNV 303
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
+R +F+ VRD+V W+ MISG AE+G
Sbjct: 304 SLSRVLFETSKVRDVV-------------------------------MWSSMISGYAETG 332
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGN 329
E + L NQM+ EG+E + AC L +HSQ+++ G S + GN
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 330 ALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
ALI MYAKCG + A VF + D VSW++MI A HG G +A+++++ M+K
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
D + FL ILSAC+HAGLV+E Q F + Y M +HYA I+LL R GK +A +V
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEV 511
Query: 450 TESMPFEPSAPIWESLLAGCRIHGNIEL-GIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
T +MP +PSA IW SLL+ C HG +++ G A L + P+ Y++LS ++ G
Sbjct: 512 TINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGN 571
Query: 509 WDEVARVRKLMRERGVKKEPGCSWIEIE 536
+ VR++M+ R + K G S IE E
Sbjct: 572 YHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 39/315 (12%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
DE + Y R +++ +R L + V W++MISGY G E + +M
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
GI+ + T +++SA N+ L + +H+ +L+ H +L NALI Y KC
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS--HILL--GNALIDMYAKC 401
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G L AREVF ++ +DLVSW+++++ Y GL
Sbjct: 402 GSLSAAREVFYELTEKDLVSWSSMINAY-----------------------------GL- 431
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
G G E+L++F M G E D A+ + AC G ++ Q I +Q + +L
Sbjct: 432 -HGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLE 490
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQHGR-GVQAIQLYEQMLK 384
I + + G + A V + MP S W+++++A HGR V + +++K
Sbjct: 491 HYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMK 550
Query: 385 EDILPDRITFLTILS 399
+ PD +LS
Sbjct: 551 SE--PDNPANYVLLS 563
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 163/390 (41%), Gaps = 38/390 (9%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D ++I+ Y + + RK+ D M H V++ ++I+ + GL EA ++M+
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 147 SMGIQMDEYTYTSLISASFNTGLFN-CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
G SL++ G + R HA VL V + + +L ++ AL+ Y K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVL--VDERMQESVL-LSTALVDMYLK 197
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
A VFD+M V++ VS WT MISG
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVS-------------------------------WTAMISGC 226
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDN-GQQIHSQVIQLGHDSS 324
+ E + LF M+ E L P + AC L + ++IH + G +
Sbjct: 227 VANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHAD 286
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
A +TMY +CG V + ++F T D V W++MI+ A+ G + + L QM K
Sbjct: 287 ERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK 346
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
E I + +T L I+SAC+++ L+ S G LID+ + G S
Sbjct: 347 EGIEANSVTLLAIVSACTNSTLLSFAS-TVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
A++V + E W S++ +HG+
Sbjct: 406 AAREVFYELT-EKDLVSWSSMINAYGLHGH 434
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFN-QMKSEGLEPCDYAYAGAIKACGVLGS- 305
R + R L + GL F +E+L+L+ ++ S G IKAC
Sbjct: 3 RALSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEP 62
Query: 306 LDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAA 365
G Q+H ++ G D N+LI+MYAK VF M + D+VS+ ++I +
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC-THYGMT 424
Q G +A++L ++M +P ++L+ C+ G + F ++ M
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQ 182
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
L+D+ + + A V + M + W ++++GC + N E+G+
Sbjct: 183 ESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMGV 236
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 187/335 (55%)
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
L+ A +FR + R+L+ W MISG + G +E L ++ M+ + P Y +A +A
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
C L L++G++ H+ +I+ S++ +AL+ MY KC VF + + ++W
Sbjct: 219 CSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITW 278
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
++I+ HG+ + ++ +E+M +E P+ +TFL +L+AC+H GLV +G +F SM
Sbjct: 279 TSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKR 338
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
YG+ P HYA ++D L RAG+ EA + P + P+W SLL CRIHGN++L
Sbjct: 339 DYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLE 398
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
AA + EL P G Y++ +N YA G + ++VR+ M GVKK+PG S IE++ V
Sbjct: 399 LAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEV 458
Query: 540 HVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPD 574
H F+ DD H +YK + ++ + Y PD
Sbjct: 459 HRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 9/214 (4%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + DL +A L + + WNAMISGYV+ GL +E + M I D+YT+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
S+ A G++ HA +++ ++ + + V++AL+ Y KC VFD
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSN----IIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEE 273
++ R++++W +++SGY ++ E F ++ E N +T+ V+++ G ++
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 274 SLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSL 306
+ F MK + G+EP YA + G G L
Sbjct: 329 GWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 238 RRLEEAKFI--FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
RR+ K I F+ +R + GL +G +E++ L + S GL+ YA
Sbjct: 57 RRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAV 113
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
++ C G++IH+Q+ +G + L+ +YA G + A ++F ++ D
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
+ WNAMI+ Q G + + +Y M + I+PD+ TF ++ ACS ++ G+
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 416 SM---CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
M C + + L+D+ + FS+ +V + + + W SL++G H
Sbjct: 234 VMIKRCIKSNIIVD----SALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYH 288
Query: 473 GNIELGIQAAERLFE 487
G + ++ E++ E
Sbjct: 289 GKVSEVLKCFEKMKE 303
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 56/294 (19%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+++ PD ++F++V A S + E H ++ H ++K C
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLE-HGKRAHAVMIKR-----------------CIK 241
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
S+ +V+S ++ Y + + ++ D ++ +
Sbjct: 242 SNIIVDS-------------------------ALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
W ++ISGY HG E F KM G + + T+ +++A + GL + G + H Y
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYS 335
Query: 181 LRT--VVQP-SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVS-WNAILSG--- 233
++ ++P +H+ A++ + G+L +A E K P ++ W ++L
Sbjct: 336 MKRDYGIEPEGQHYA-----AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 234 YINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
+ N + LE A F E+ N + V +G A G E + K+ +M++ G++
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVK 444
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 223/438 (50%), Gaps = 46/438 (10%)
Query: 104 LASARKLLDGMTHPIAVAWNAMISGYVRHG------LYEEAFDTFRKMHSMGIQMDEYTY 157
L+ A +L + +P +N +IS V + L +D S ++ +E+TY
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 158 TSLISAS-FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 216
SL AS F+ GR LHA+VL+ ++P H V AL+ FY CGKL
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLK-FLEPVNHDRF-VQAALVGFYANCGKL------- 166
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAES---GFGEE 273
EA+ +F + E +L TW +++ A S EE
Sbjct: 167 ------------------------REARSLFERIREPDLATWNTLLAAYANSEEIDSDEE 202
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
L LF +M+ + P + + IK+C LG G H V++ + G +LI
Sbjct: 203 VLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLID 259
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
+Y+KCG + +A VF M D +NAMI LA HG G + I+LY+ ++ + ++PD T
Sbjct: 260 LYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSAT 319
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
F+ +SACSH+GLV EG F+SM YG+ P +HY L+DLL R+G+ EA++ + M
Sbjct: 320 FVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
Query: 454 PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVA 513
P +P+A +W S L + HG+ E G A + L L E G Y++LSN+YA + +W +V
Sbjct: 380 PVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVE 439
Query: 514 RVRKLMRERGVKKEPGCS 531
+ R+LM++ V K PG S
Sbjct: 440 KTRELMKDHRVNKSPGIS 457
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 40/289 (13%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
++ Y L AR L + + P WN +++ Y + + M ++ +
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
E + +LI + N G F G H YVL+ + ++ V +LI Y+KCG L AR
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF----VGTSLIDLYSKCGCLSFAR 271
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
+VFD+M RD+ +NA MI GLA GFG+E
Sbjct: 272 KVFDEMSQRDVSCYNA-------------------------------MIRGLAVHGFGQE 300
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALI 332
++L+ + S+GL P + I AC G +D G QI + + + G + + L+
Sbjct: 301 GIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLV 360
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQHG---RGVQAIQ 377
+ + G + A+ MP + + W + + + HG RG A++
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T++I Y + L+ ARK+ D M+ +NAMI G HG +E + ++ + S G+
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV--VQPS-EHFILSVNNALITFYTKCGK 208
D T+ ISA ++GL + G Q+ ++ V ++P EH+ L+ + G+
Sbjct: 315 PDSATFVVTISACSHSGLVDEGLQIFN-SMKAVYGIEPKVEHY-----GCLVDLLGRSGR 368
Query: 209 LVQAREVFDKMPVR-DLVSWNAIL 231
L +A E KMPV+ + W + L
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFL 392
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 247/505 (48%), Gaps = 60/505 (11%)
Query: 33 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 92
LH + +K+GV V ++L+S Y C + SARK+FDE P +++ +W
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGC---------VVSARKVFDEMP--ERNVATWN 116
Query: 93 TMIAGYVRNDDLASARKLLDGMTH-PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
MI GY+ N D A L + ++ V W MI GY + E+A + F +M
Sbjct: 117 AMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERM------ 170
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ L+ V S + VNN K+
Sbjct: 171 --------------------------PFELKNVKAWSVMLGVYVNNR---------KMED 195
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
AR+ F+ +P ++ W+ ++SGY + EA+ IF V R+L+ W +I+G A++G+
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 255
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
++++ F M+ EG EP + + AC G LD G+++HS + G + + NAL
Sbjct: 256 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 315
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MYAKCG + A VF ++ N+MI+ LA HG+G +A++++ M D+ PD
Sbjct: 316 IDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDE 375
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
ITF+ +L+AC H G + EG F M T + P H+ LI LL R+GK EA ++ +
Sbjct: 376 ITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVK 434
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTY-----IILSNMYAHL 506
M +P+ + +LL C++H + E+ Q ++ E +Y +SN+YAH
Sbjct: 435 EMHVKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNLYAHT 493
Query: 507 GKWDEVARVRKLMRERGVKKEPGCS 531
+W +R M +RG++K PG S
Sbjct: 494 ERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 297 IKACG-VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
++AC V+ + G+ +HS+ I+ G S + G++LI+MY KCG V A VF MP +
Sbjct: 52 LRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERN 111
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
+WNAMI +G V A L+E++ + + +T++ ++ +++ + F+
Sbjct: 112 VATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFE 168
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
M ++ ++ + K +A+K E +P E +A +W +++G
Sbjct: 169 RMPFELKNVKA---WSVMLGVYVNNRKMEDARKFFEDIP-EKNAFVWSLMMSG 217
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 218/414 (52%), Gaps = 37/414 (8%)
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
+WN +I + R G ++ D F +M ++ D++T ++ A + G +H
Sbjct: 100 SWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVL 159
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
L+ S L V++AL+ Y GKL+ AR++FD MPVRD V + A+ GY+
Sbjct: 160 CLKLGFSSS----LFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+FRE + SGF +S+ + + + A
Sbjct: 216 AMLGLAMFRE---------------MGYSGFALDSVVMVS----------------LLMA 244
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
CG LG+L +G+ +H I+ L+ GNA+ MY KC ++ YA VF+ M D +SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
+++I G V + +L+++MLKE I P+ +TFL +LSAC+H GLV++ YF M
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-Q 363
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
Y + P HYA + D + RAG EA+K E MP +P + ++L+GC+++GN+E+G
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWI 533
+ A L +L P + Y+ L+ +Y+ G++DE +R+ M+E+ + K PGCS I
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 246 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLG 304
+F +P RN+ +W ++I + SGF +S+ LF +M E + P D+ ++AC
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIA 364
+G IH ++LG SSL +AL+ MY G + +A +F MP DSV + AM
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH---YFDSMCTHY 421
Q G + + ++ +M D + +++L AC G +K G+ + C+
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 422 GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
G+ G + D+ + A V +M W SL+ G + G++ + +
Sbjct: 269 GLNLGN----AITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 482 AERLFELTPEQDG-TYIILSNMYAHLGKWDEVARVRKLMRERGVKKE 527
+ + + E + T++ + + AH G ++ +LM+E + E
Sbjct: 324 FDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPE 370
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ ++ YV L ARKL D M +V + AM GYV+ G FR+M G
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+D SL+ A G G+ +H + +R L++ NA+ Y KC L
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC----SCLGLNLGNAITDMYVKCSILDY 288
Query: 212 AREVFDKMPVRDLVSWNAILSGY-------INARRLEEAKFIFREVPERNLLTWTVMISG 264
A VF M RD++SW++++ GY ++ + +E + +E E N +T+ ++S
Sbjct: 289 AHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDE---MLKEGIEPNAVTFLGVLSA 345
Query: 265 LAESGFGEESLKLFNQMKSEGLEP----------C---------------------DYAY 293
A G E+S F M+ + P C D A
Sbjct: 346 CAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAV 405
Query: 294 AGAI-KACGVLGSLDNGQQIHSQVIQL 319
GA+ C V G+++ G+++ ++IQL
Sbjct: 406 MGAVLSGCKVYGNVEVGERVARELIQL 432
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 219/406 (53%), Gaps = 42/406 (10%)
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
AWN++ISGY G YE+A + +M G++ D +T+ ++ A G G +H
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIH--- 218
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
R +V+ + + V NAL+ Y KCG +V+AR VFD
Sbjct: 219 -RDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM---------------------- 255
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
+P ++ ++W M++G G E+L +F M G+EP A + +
Sbjct: 256 ---------IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL--A 304
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
VL S +G+Q+H VI+ G + LS NALI +Y+K G +G A +F M D+VSWN
Sbjct: 305 RVL-SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
A+I+A H + ++ +EQM + + PD ITF+++LS C++ G+V++G+ F M
Sbjct: 364 AIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEA-KKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
YG+ P +HYA +++L RAG EA + + M E +W +LL C +HGN ++G
Sbjct: 421 YGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGE 480
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
AA+RLFEL P+ + + +L +Y+ + ++V RVR++M +RG++
Sbjct: 481 VAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 169/349 (48%), Gaps = 59/349 (16%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M DG PD F+F VL A I + + +H D+VK G VLN L+ Y C
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQI-GEAIHRDLVKEGFGYDVYVLNALVVMYAKCG 244
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
D+ AR + D + H V
Sbjct: 245 ------------------------------------------DIVKARNVFDMIPHKDYV 262
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+WN+M++GY+ HGL EA D FR M GI+ D+ +S+++ + F GRQLH +V
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWV 319
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI-NARR 239
+R ++ + LSV NALI Y+K G+L QA +FD+M RD VSWNAI+S + N+
Sbjct: 320 IRRGME----WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG 375
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIK 298
L+ + + R + + +T+ ++S A +G E+ +LF+ M E G++P YA +
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN 435
Query: 299 ACGVLGSLDNGQQIHSQVIQ-LGHDSSLSAGNALITMYAKCGVVGYADM 346
G G + ++ +S ++Q +G ++ + AL +YA C + G D+
Sbjct: 436 LYGRAGMM---EEAYSMIVQEMGLEAGPTVWGAL--LYA-CYLHGNTDI 478
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 68/391 (17%)
Query: 149 GIQMDE-YTYTSLISASFNTGLFNCGRQLH----AYVLRTVVQPSEHFILSVNNALITFY 203
GI + E + SL+ ++ + G ++H Y+LR L +++ L+ Y
Sbjct: 86 GISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNN--------LGISSKLVRLY 137
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
CG A EVFD+M RD + W +IS
Sbjct: 138 ASCGYAEVAHEVFDRMSKRD-----------------------------SSPFAWNSLIS 168
Query: 264 GLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
G AE G E+++ L+ QM +G++P + + +KACG +GS+ G+ IH +++ G
Sbjct: 169 GYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY 228
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
+ NAL+ MYAKCG + A VF +P+ D VSWN+M+ HG +A+ ++ M+
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 384 KEDILPDRITFLTILSAC--------SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
+ I PD++ ++L+ H +++ G + S+ LI
Sbjct: 289 QNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVAN------------ALIV 336
Query: 436 LLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG- 494
L + G+ +A + + M E W ++++ + N G++ E++ + DG
Sbjct: 337 LYSKRGQLGQACFIFDQM-LERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGI 392
Query: 495 TYIILSNMYAHLGKWDEVARVRKLM-RERGV 524
T++ + ++ A+ G ++ R+ LM +E G+
Sbjct: 393 TFVSVLSLCANTGMVEDGERLFSLMSKEYGI 423
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 239/474 (50%), Gaps = 43/474 (9%)
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHG---LYEEAFDTFRKMHSMGIQMDEYTY 157
N A + D + P + ++ MI R L F K I T+
Sbjct: 60 NKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTF 119
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
LI A F+ G+Q+H +V++ V S+ + +
Sbjct: 120 HFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT----------------------- 156
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+L Y+ + L +A+ +F E+P+ +++ W V+++G G G E L++
Sbjct: 157 -----------GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALITMYA 336
F +M +GLEP +++ A+ AC +G+L G+ IH V + +S + G AL+ MYA
Sbjct: 206 FREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYA 265
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED-ILPDRITFL 395
KCG + A VF + + SW A+I A +G +A+ E++ +ED I PD + L
Sbjct: 266 KCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLL 325
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF 455
+L+AC+H G ++EG+ ++M Y +TP +HY+ ++DL+CRAG+ +A + E MP
Sbjct: 326 GVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPM 385
Query: 456 EPSAPIWESLLAGCRIHGNIELGIQAAERLFEL----TPEQDGTYIILSNMYAHLGKWDE 511
+P A +W +LL GCR H N+ELG A + L +L E++ + LSN+Y + + E
Sbjct: 386 KPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPE 445
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIE 565
++VR ++ +RGV+K PG S +E++ V F+ D HP + ++ + L ++
Sbjct: 446 ASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVD 499
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D T ++ YV + L ARK+ D + P V W+ +++GYVR GL E + FR+M
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G++ DE++ T+ ++A G G+ +H +V + S+ F V AL+ Y KC
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF---VGTALVDMYAKC 267
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G + A EVF K+ R++ SW A++ GY A
Sbjct: 268 GCIETAVEVFKKLTRRNVFSWAALIGGY-------------------------------A 296
Query: 267 ESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQI 312
G+ ++++ +++ E G++P G + AC G L+ G+ +
Sbjct: 297 AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSM 343
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 229/421 (54%), Gaps = 17/421 (4%)
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHS-MGIQMDEYTYTSLI---SASFNTGLFNCGRQ 175
++ +S Y G +E+A + F +MHS + +D + ++ + +A+F L G
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL---GGS 69
Query: 176 LHAYVLRTVVQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSG 233
+HA+ +++ +F+ + V AL+ Y KC + AR++FD++P R+ V WNA++S
Sbjct: 70 VHAHSVKS------NFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISH 123
Query: 234 YINARRLEEAKFIFREVPER-NLLTWTVMISGLAESGFGE-ESLKLFNQMKSEGLEPCDY 291
Y + +++EA ++ + N ++ +I GL + G +++ + +M +P
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
+ AC +G+ ++IHS + + + L+ Y +CG + Y +VF +M
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
D V+W+++I+A A HG A++ +++M + PD I FL +L ACSHAGL E
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
YF M YG+ +DHY+ L+D+L R G+F EA KV ++MP +P+A W +LL CR
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 472 HGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
+G IEL AA L + PE Y++L +Y +G+ +E R+R M+E GVK PG S
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Query: 532 W 532
W
Sbjct: 424 W 424
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 158/362 (43%), Gaps = 58/362 (16%)
Query: 33 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 92
+H VK + P V LL Y C S ++ ARKLFDE P Q++ W
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLS---------VSHARKLFDEIP--QRNAVVWN 118
Query: 93 TMIAGYVRNDDLASARKLLDGM-THPIAVAWNAMISGYV--RHGLYEEAFDTFRKMHSMG 149
MI+ Y + A +L + M P ++NA+I G V G Y A + +RKM
Sbjct: 119 AMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFR 177
Query: 150 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
+ + T +L+SA G F +++H+Y R +++P + + L+ Y +CG +
Sbjct: 178 FKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ----LKSGLVEAYGRCGSI 233
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
V + VFD M RD+V+W++++S Y A G
Sbjct: 234 VYVQLVFDSMEDRDVVAWSSLISAY-------------------------------ALHG 262
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ--LGHDSSLSA 327
E +LK F +M+ + P D A+ +KAC G D ++ + +Q G +S
Sbjct: 263 DAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEA-LVYFKRMQGDYGLRASKDH 321
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSV-SWNAMIAALAQHGRGVQAIQLYEQMLKED 386
+ L+ + ++ G A V MP + +W A++ A +G I+L E +E
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE----IELAEIAAREL 377
Query: 387 IL 388
++
Sbjct: 378 LM 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 17/205 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ ++ Y R + + + D M VAW+++IS Y HG E A TF++M +
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 152 MDEYTYTSLISASFNTGLFNCG-----RQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
D+ + +++ A + GL + R Y LR +H+ + L+ ++
Sbjct: 281 PDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRA---SKDHY-----SCLVDVLSRV 332
Query: 207 GKLVQAREVFDKMPVRDLV-SWNAILSGYINARRLEEAKFIFRE---VPERNLLTWTVMI 262
G+ +A +V MP + +W A+L N +E A+ RE V N + ++
Sbjct: 333 GRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLG 392
Query: 263 SGLAESGFGEESLKLFNQMKSEGLE 287
G EE+ +L +MK G++
Sbjct: 393 KIYMSVGRQEEAERLRLKMKESGVK 417
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 238 bits (608), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 228/444 (51%), Gaps = 45/444 (10%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y +D +A K+ + + V WN MIS Y + L + A +++MH +G++ DE+T+
Sbjct: 333 YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF 392
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
SL++ S + + + A +++ + + ++NALI+ Y+K G++
Sbjct: 393 GSLLATSLDLDVL---EMVQACIIKFGLSSK----IEISNALISAYSKNGQI-------- 437
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
E+A +F +NL++W +ISG +GF E L+
Sbjct: 438 -----------------------EKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 278 FN-QMKSE-GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMY 335
F+ ++SE + P Y + + C SL G Q H+ V++ G GNALI MY
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 336 AKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITF 394
++CG + + VF M D VSWN++I+A ++HG G A+ Y+ M E ++PD TF
Sbjct: 535 SQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATF 594
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK---KVTE 451
+LSACSHAGLV+EG F+SM +G+ DH++ L+DLL RAG EA+ K++E
Sbjct: 595 SAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISE 654
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
+W +L + C HG+++LG A+ L E + Y+ LSN+YA G W E
Sbjct: 655 K-TIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKE 713
Query: 512 VARVRKLMRERGVKKEPGCSWIEI 535
R+ + G K+ GCSW+ +
Sbjct: 714 AEETRRAINMIGAMKQRGCSWMRL 737
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 218/465 (46%), Gaps = 62/465 (13%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVES 67
PD +S S + + + + Q+HC ++ G++C V NTLLS Y E
Sbjct: 55 PDQYSVSLAITTARHLRDTIFG-GQVHCYAIRSGLLCHSHVSNTLLSLY---------ER 104
Query: 68 PVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA-WNAMI 126
+AS +K FDE + + D SWTT+++ + D+ A ++ D M VA WNAMI
Sbjct: 105 LGNLASLKKKFDE--IDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMI 162
Query: 127 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 186
+G G +E + + FR+MH +G++ D++ + +++S + G + G+Q+H+ V++
Sbjct: 163 TGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIK---- 217
Query: 187 PSEHFIL-SVNNALITFYTKCGKLVQAREVFDK--MPVRDLVSWNAILSGYINARRLEEA 243
+ FI SV NALIT Y C +V A VF++ + VRD V++N ++ G +R
Sbjct: 218 -AGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR---- 272
Query: 244 KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVL 303
+ESL +F +M L P D + + +C
Sbjct: 273 ----------------------------DESLLVFRKMLEASLRPTDLTFVSVMGSCSCA 304
Query: 304 GSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMI 363
G Q+H I+ G++ NA +TMY+ G A VF ++ D V+WN MI
Sbjct: 305 AM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI 361
Query: 364 AALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGM 423
++ Q G A+ +Y++M + PD TF ++L+ +++ Q + +G+
Sbjct: 362 SSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQ----ACIIKFGL 417
Query: 424 TPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ + LI + G+ +A + E + W ++++G
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFER-SLRKNLISWNAIISG 461
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 33/186 (17%)
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
LL ++GL SG +LKLF + + L P Y+ + AI L G Q+
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 313 HSQVIQLGHDSSLSAGNALITMYA-------------------------------KCGVV 341
H I+ G N L+++Y K G +
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 342 GYADMVFLTMPYVDSVS-WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
YA VF MP D V+ WNAMI + G +++L+ +M K + D+ F TILS
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM 199
Query: 401 CSHAGL 406
C + L
Sbjct: 200 CDYGSL 205
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 239/472 (50%), Gaps = 39/472 (8%)
Query: 84 SQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFR 143
S D P ++ Y D+ A + + +P V+WN++ISG +G E+A +R
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 144 KMHSMGI-QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
++ M + DEYT+++ ISA+ F G+ LH V
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT--------------------- 429
Query: 203 YTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 262
KL R VF +LS Y R E A+ +F + ER+++ WT MI
Sbjct: 430 -----KLGYERSVF---------VGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
G + G E +++ F +M E ++ + I AC + L G+ H I+ G D
Sbjct: 476 VGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFD 535
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
+S AL+ MY K G A+ +F D WN+M+ A +QHG +A+ +EQ+
Sbjct: 536 CVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI 595
Query: 383 LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGK 442
L+ +PD +T+L++L+ACSH G +G+ ++ M G+ G HY+ +++L+ +AG
Sbjct: 596 LENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGL 654
Query: 443 FSEAKKVTE-SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSN 501
EA ++ E S P A +W +LL+ C N+++G+ AAE++ +L PE T+I+LSN
Sbjct: 655 VDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSN 714
Query: 502 MYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEI-ENMVHVFLVDDAVHPEV 552
+YA G+W++VA +R+ +R K+PG SWIE+ N VF D +PEV
Sbjct: 715 LYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV 766
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 183/426 (42%), Gaps = 44/426 (10%)
Query: 77 LFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAM--ISGYVRHG- 133
LF E + + + +I+ YVR L ARK+ D M V + + YV G
Sbjct: 11 LFVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGS 70
Query: 134 -LYEE--AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
L+ + +F+ + M + + L + + RQ+HA VL +
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
+ NN LI+ Y +CG L QAR+VFDKMP R++VS+NA+ S Y
Sbjct: 131 SPYA-NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY---------------- 173
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
RN F + L M E ++P + ++ C VL + G
Sbjct: 174 -SRN-------------PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
++SQ+I+LG+ ++ +++ MY+ CG + A +F + D+V+WN MI ++
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ--HYFDSMCTHYGMTPGED 428
+ + + ML + P + T+ +L+ CS G G+ H + P ++
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN 339
Query: 429 HYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
L+D+ C G EA V + P+ W S+++GC +G E + RL +
Sbjct: 340 A---LLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 489 -TPEQD 493
TP D
Sbjct: 396 STPRPD 401
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 211/505 (41%), Gaps = 56/505 (11%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWG------VMCVPSVLNTLLSCY 56
R F P L +S + E LH ++K G M + + ++++
Sbjct: 42 RKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELT 101
Query: 57 ICCASSTLVESP-----VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLL 111
C S T+++ +++ + E+P + + +I+ YVR L ARK+
Sbjct: 102 RKCVSITVLKRARQIHALVLTAGAGAATESPYANNN------LISMYVRCGSLEQARKVF 155
Query: 112 DGMTHPIAVAWNAMISGYVRHGLYEE-AFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 170
D M H V++NA+ S Y R+ + AF M ++ + T+TSL+
Sbjct: 156 DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQV------- 208
Query: 171 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 230
C VL V+ S S+N+ +I +VQ ++
Sbjct: 209 -CA------VLEDVLMGS-----SLNSQIIKLGYSDNVVVQT----------------SV 240
Query: 231 LSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCD 290
L Y + LE A+ IF V R+ + W MI G ++ E+ L F M G++P
Sbjct: 241 LGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQ 300
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
+ Y+ + C LGS G+ IH+++I + L NAL+ MY CG + A VF
Sbjct: 301 FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGR 360
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI-LPDRITFLTILSACSHAGLVKE 409
+ + VSWN++I+ +++G G QA+ +Y ++L+ PD TF +SA +
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
G+ T G L+ + + + A+KV + M E +W ++ G
Sbjct: 421 GK-LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVGH 478
Query: 470 RIHGNIELGIQAAERLFELTPEQDG 494
GN EL +Q ++ DG
Sbjct: 479 SRLGNSELAVQFFIEMYREKNRSDG 503
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 17/295 (5%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE-----SGFGEESLKL--FNQ 280
N ++S Y+ LE+A+ +F ++P+RN++T +S + E S + +KL F
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTL-FGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS---AGNALITMYAK 337
+ L + + C + L +QIH+ V+ G ++ A N LI+MY +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 338 CGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR-GVQAIQLYEQMLKEDILPDRITFLT 396
CG + A VF MP+ + VS+NA+ +A +++ A L M E + P+ TF +
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE 456
++ C+ V G +S G + ++ + G A+++ + +
Sbjct: 205 LVQVCAVLEDVLMGSS-LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN-N 262
Query: 457 PSAPIWESLLAGCRIHGNIELGIQAAERLF--ELTPEQDGTYIILSNMYAHLGKW 509
A W +++ G + IE G+ + + P Q TY I+ N + LG +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQ-FTYSIVLNGCSKLGSY 316
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 240/478 (50%), Gaps = 43/478 (8%)
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHG---LYEEAFDTFRKMHSMGIQMDEYTY 157
N A + D + P + ++ MI R L F K I T+
Sbjct: 60 NKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTF 119
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
LI A F+ G+Q+H +V++ V S+ + +
Sbjct: 120 HFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT----------------------- 156
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+L Y+ + L +A+ +F E+P+ +++ W V+++G G G E L++
Sbjct: 157 -----------GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALITMYA 336
F +M G+EP +++ A+ AC +G+L G+ IH V + +S + G AL+ MYA
Sbjct: 206 FKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYA 265
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED-ILPDRITFL 395
KCG + A VF + + SW A+I A +G +A +++ +ED I PD + L
Sbjct: 266 KCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLL 325
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF 455
+L+AC+H G ++EG+ ++M YG+TP +HY+ ++DL+CRAG+ +A + E MP
Sbjct: 326 GVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPM 385
Query: 456 EPSAPIWESLLAGCRIHGNIELGIQAAERLFEL----TPEQDGTYIILSNMYAHLGKWDE 511
+P A +W +LL GCR H N+ELG A + L +L E++ + LSN+Y + + E
Sbjct: 386 KPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPE 445
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKL 569
+VR ++ +RG++K PG S +E++ +V F+ D HP + ++ + L ++ ++
Sbjct: 446 AFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQI 503
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 9/224 (4%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ YV + L ARK+ D + P V W+ +++GYVR GL E + F++M GI+
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
DE++ T+ ++A G G+ +H +V + S+ F V AL+ Y KCG +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF---VGTALVDMYAKCGCIET 272
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP-ERNLLTWTVMISGL----A 266
A EVF+K+ R++ SW A++ GY ++A + E + +V++ G+ A
Sbjct: 273 AVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACA 332
Query: 267 ESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLDNG 309
GF EE + M++ G+ P Y+ + G LD+
Sbjct: 333 HGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDA 376
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 231/451 (51%), Gaps = 47/451 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH-SMGI 150
T ++ Y ++ + AR++ D V W+AMI GYV + + +EA + F +M + +
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 151 QMDEYTYTSLI---SASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL--SVNNALITFYTK 205
M LI A F G + GR +H Y ++ FIL +V N +I+FY K
Sbjct: 304 AMVTPVAIGLILMGCARF--GDLSGGRCVHCYAVKA------GFILDLTVQNTIISFYAK 355
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
G L A F ++ ++D++S+N+ +I+G
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNS-------------------------------LITGC 384
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
+ EES +LF++M++ G+ P G + AC L +L +G H + G+ +
Sbjct: 385 VVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNT 444
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE 385
S NAL+ MY KCG + A VF TM D VSWN M+ HG G +A+ L+ M +
Sbjct: 445 SICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQET 504
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCT-HYGMTPGEDHYARLIDLLCRAGKFS 444
+ PD +T L ILSACSH+GLV EG+ F+SM + + P DHY + DLL RAG
Sbjct: 505 GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLD 564
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYA 504
EA MPFEP + +LL+ C + N ELG + ++++ L E + ++LSN Y+
Sbjct: 565 EAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYS 623
Query: 505 HLGKWDEVARVRKLMRERGVKKEPGCSWIEI 535
+W++ AR+R + ++RG+ K PG SW+++
Sbjct: 624 AAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 38/333 (11%)
Query: 157 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 216
+ SL+ + G+ +H ++L+ + S +L VN L Y C ++ AR VF
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVL-VN--LTRLYASCNEVELARHVF 58
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D++P P N + W +MI A + F E++L
Sbjct: 59 DEIPH-----------------------------PRINPIAWDLMIRAYASNDFAEKALD 89
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
L+ +M + G+ P Y Y +KAC L ++D+G+ IHS V + + AL+ YA
Sbjct: 90 LYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYA 149
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL-PDRITFL 395
KCG + A VF MP D V+WNAMI+ + H I L+ M + D L P+ T +
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPF 455
+ A AG ++EG+ CT G + ++D+ ++ A++V + + F
Sbjct: 210 GMFPALGRAGALREGKA-VHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDF 267
Query: 456 EPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
+ + W +++ G + E+ +A E F++
Sbjct: 268 KKNEVTWSAMIGG---YVENEMIKEAGEVFFQM 297
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 180/429 (41%), Gaps = 51/429 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GI 150
T ++ Y + +L A K+ D M VAWNAMISG+ H + F M + G+
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ T + A G G+ +H Y R + +N
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTR----------MGFSN------------- 238
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
DLV IL Y ++ + A+ +F ++N +TW+ MI G E+
Sbjct: 239 ------------DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEM 286
Query: 271 GEESLKLFNQM-KSEGLEPCDYAYAGAI-KACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
+E+ ++F QM ++ + G I C G L G+ +H ++ G L+
Sbjct: 287 IKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
N +I+ YAK G + A F + D +S+N++I + R ++ +L+ +M I
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
PD T L +L+ACSH + G C +G L+D+ + GK AK+
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSS-CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKR 465
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE------LTPEQDGTYIILSNM 502
V ++M + W ++L G IHG LG +A LF + P++ ILS
Sbjct: 466 VFDTM-HKRDIVSWNTMLFGFGIHG---LGKEALS-LFNSMQETGVNPDEVTLLAILSAC 520
Query: 503 YAHLGKWDE 511
+H G DE
Sbjct: 521 -SHSGLVDE 528
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 42/320 (13%)
Query: 98 YVRNDDLASARKLLDGMTHPI--AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEY 155
Y +++ AR + D + HP +AW+ MI Y + E+A D + KM + G++ +Y
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 156 TYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREV 215
TY ++ A + G+ +H++V + + V AL+ FY KCG+L A +V
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMY----VCTALVDFYAKCGELEMAIKV 160
Query: 216 FDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESL 275
FD+MP RD+V+WNA++SG+ +L + GL
Sbjct: 161 FDEMPKRDMVAWNAMISGF-------------------SLHCCLTDVIGL---------- 191
Query: 276 KLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMY 335
+ + +GL P G A G G+L G+ +H ++G + L ++ +Y
Sbjct: 192 -FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVY 250
Query: 336 AKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED----ILPDR 391
AK + YA VF + V+W+AMI ++ +A +++ QML D + P
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 392 ITFLTILSACSHAGLVKEGQ 411
I IL C+ G + G+
Sbjct: 311 IGL--ILMGCARFGDLSGGR 328
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 234/468 (50%), Gaps = 41/468 (8%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
DLA AR LL + WN + GY E+ + +M GI+ ++ T+ L+
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLK 121
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
A + GRQ+ VL+ F + V N LI Y C K AR+VFD
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFD----FDVYVGNNLIHLYGTCKKTSDARKVFD----- 172
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
E+ ERN+++W +++ L E+G + F +M
Sbjct: 173 --------------------------EMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG 342
+ P + + ACG G+L G+ +HSQV+ + + G AL+ MYAK G +
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 343 YADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED-ILPDRITFLTILSAC 401
YA +VF M + +W+AMI LAQ+G +A+QL+ +M+KE + P+ +TFL +L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
SH GLV +G YF M + + P HY ++D+L RAG+ +EA + MPFEP A +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 462 WESLLAGCRIHGNIE---LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKL 518
W +LL+ C IH + + +G + +RL EL P++ G +I++N +A W E A VR++
Sbjct: 385 WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRV 444
Query: 519 MRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEM 566
M+E +KK G S +E+ H F E ++Y+ L+ ++
Sbjct: 445 MKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
A+ L A+ + + TW ++ G + S ES+ ++++MK G++P +
Sbjct: 60 AKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFL 119
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
+KAC L G+QI +V++ G D + GN LI +Y C A VF M +
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNV 179
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
VSWN+++ AL ++G+ + + +M+ + PD T + +LSAC G
Sbjct: 180 VSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG-------GNLSLGK 232
Query: 417 MCTHYGMTPGEDHYAR----LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
+ M + R L+D+ ++G A+ V E M + + W +++ G +
Sbjct: 233 LVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQY 291
Query: 473 GNIELGIQAAERLFE 487
G E +Q ++ +
Sbjct: 292 GFAEEALQLFSKMMK 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK-MHSMGI 150
T ++ Y ++ L AR + + M W+AMI G ++G EEA F K M +
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 151 QMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
+ + T+ ++ A +TGL + G + H ++P ++ A++ + G+L
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKP----MMIHYGAMVDILGRAGRL 366
Query: 210 VQAREVFDKMPVR-DLVSWNAILSG 233
+A + KMP D V W +LS
Sbjct: 367 NEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 237/450 (52%), Gaps = 17/450 (3%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG---LYEEAFDTFRKMHSM 148
T++++ Y R + A ++ + + H V +NA ISG + +G L F+ RK S
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE 227
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGK 208
+ ++ T+ + I+A + GRQLH V++ Q F V ALI Y+KC
Sbjct: 228 --EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ----FETMVGTALIDMYSKCRC 281
Query: 209 LVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMIS 263
A VF ++ R+L+SWN+++SG + + E A +F ++ L TW +IS
Sbjct: 282 WKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLIS 341
Query: 264 GLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
G ++ G E+ K F +M S + P + AC + +L NG++IH VI+ +
Sbjct: 342 GFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAER 401
Query: 324 SLSAGNALITMYAKCGVVGYADMVF--LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
+ +LI MY KCG+ +A +F D V WN MI+ +HG AI+++E
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFEL 461
Query: 382 MLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAG 441
+ +E + P TF +LSACSH G V++G F M YG P +H +IDLL R+G
Sbjct: 462 LREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSG 521
Query: 442 KFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSN 501
+ EAK+V + M S+ SLL CR H + LG +AA +L EL PE ++ILS+
Sbjct: 522 RLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
Query: 502 MYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
+YA L +W++V +R+++ ++ + K PG S
Sbjct: 581 IYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 209/468 (44%), Gaps = 76/468 (16%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T +++ Y++ + A K+LD M + NA +SG + +G +AF F G
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
M+ T S++ G G QLH +++ + + V +L++ Y++CG+ V
Sbjct: 130 MNSVTVASVLGG---CGDIEGGMQLHCLAMKSGFEMEVY----VGTSLVSMYSRCGEWVL 182
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +F+K+P + +V++NA ISGL E+G
Sbjct: 183 AARMFEKVPHKSVVTYNAF-------------------------------ISGLMENGVM 211
Query: 272 EESLKLFNQM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+FN M K EP D + AI AC L +L G+Q+H V++ G A
Sbjct: 212 NLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTA 271
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDS-VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
LI MY+KC A +VF + + +SWN++I+ + +G+ A++L+E++ E + P
Sbjct: 272 LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP 331
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSM------------------CTH-YGMTPGEDHY 430
D T+ +++S S G V E +F+ M C+ + + G++ +
Sbjct: 332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIH 391
Query: 431 AR---------------LIDLLCRAGKFSEAKKVTESMPFEPSAPI-WESLLAGCRIHGN 474
LID+ + G S A+++ + +P P+ W +++G HG
Sbjct: 392 GHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGE 451
Query: 475 IELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVRKLMRE 521
E I+ E L E E T+ + + +H G ++ +++ +LM+E
Sbjct: 452 CESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 152/326 (46%), Gaps = 42/326 (12%)
Query: 205 KCGKLVQAR----EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTV 260
K G +VQ R +V D+ + A++S Y+ +++ +A + E+PER + +
Sbjct: 43 KLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNA 102
Query: 261 MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLG 320
+SGL E+GF ++ ++F + G A + CG ++ G Q+H ++ G
Sbjct: 103 AVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSG 159
Query: 321 HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYE 380
+ + G +L++MY++CG A +F +P+ V++NA I+ L ++G ++
Sbjct: 160 FEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFN 219
Query: 381 QMLK-EDILPDRITFLTILSACSHA----------GLVKEGQHYFDSMCTHYGMTPGEDH 429
M K P+ +TF+ ++AC+ GLV + + F++M T D
Sbjct: 220 LMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG----TALIDM 275
Query: 430 YARLIDLLCRAGK-----FSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAER 484
Y++ CR K F+E K + W S+++G I+G E ++ E+
Sbjct: 276 YSK-----CRCWKSAYIVFTELKDTRNLIS-------WNSVISGMMINGQHETAVELFEK 323
Query: 485 LFE--LTPEQDGTYIILSNMYAHLGK 508
L L P+ T+ L + ++ LGK
Sbjct: 324 LDSEGLKPD-SATWNSLISGFSQLGK 348
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P + + +K+C LG + G+ +H+QV++ G + AL++MY K V A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
MP S NA ++ L ++G A +++ + +T ++L C
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI--- 145
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLA 467
EG + G L+ + R G++ A ++ E +P + S + + ++
Sbjct: 146 -EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK-SVVTYNAFIS 203
Query: 468 GCRIHGNIEL 477
G +G + L
Sbjct: 204 GLMENGVMNL 213
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/612 (27%), Positives = 284/612 (46%), Gaps = 115/612 (18%)
Query: 7 APDPFSFSTVLGAMSLIAE--------EEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYIC 58
A + F +S VL A L+ + E + L DVV ++N+++ Y+
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV---------LMNSVVDMYV- 153
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPI 118
+ L+E A F E + + SW T+I+GY + + A L M P
Sbjct: 154 -KNGRLIE-------ANSSFKE--ILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
V+WN +ISG+V G A + +M G+ +D + + A GL G+QLH
Sbjct: 204 VVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHC 262
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF--DKMPVRDLVS-WNAILSGYI 235
V+++ ++ S I +ALI Y+ CG L+ A +VF +K+ V V+ WN++LSG++
Sbjct: 263 CVVKSGLESSPFAI----SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 236 NARRLEEAKFIFREVPERNL---------------------------------------L 256
E A ++ ++ + +L +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI 378
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG------------ 304
++++ A G +++ KLF+++ ++ + A++G I+ C G
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDI----IAFSGLIRGCVKSGFNSLAFYLFREL 434
Query: 305 ---SLDNGQQIHSQVIQL--------------------GHDSSLSAGNALITMYAKCGVV 341
LD Q I S ++++ G++S AL+ MY KCG +
Sbjct: 435 IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEI 494
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
++F M D VSW +I Q+GR +A + + +M+ I P+++TFL +LSAC
Sbjct: 495 DNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
H+GL++E + ++M + YG+ P +HY ++DLL +AG F EA ++ MP EP I
Sbjct: 555 RHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTI 614
Query: 462 WESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRE 521
W SLL C H N L AE+L + P+ Y LSN YA LG WD++++VR+ ++
Sbjct: 615 WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Query: 522 RGVKKEPGCSWI 533
G KE G SWI
Sbjct: 675 LGA-KESGMSWI 685
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 216/467 (46%), Gaps = 22/467 (4%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGI 150
+I+ YV L+ A K+ D M+ V W M+SGY G +A + +R+M S
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+E+ Y++++ A G QL V + + + + + N+++ Y K G+L+
Sbjct: 104 AANEFMYSAVLKACGLVGDI----QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLI 159
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+A F ++ SWN ++SGY A ++EA +F +P+ N+++W +ISG + G
Sbjct: 160 EANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG- 218
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+L+ +M+ EGL +A +KAC G L G+Q+H V++ G +SS A +A
Sbjct: 219 SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISA 278
Query: 331 LITMYAKCGVVGYADMVF--LTMPYVDSVS-WNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
LI MY+ CG + YA VF + SV+ WN+M++ + A+ L Q+ + D+
Sbjct: 279 LIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDL 338
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
D T L C + ++ G S+ G + L+DL G +A
Sbjct: 339 CFDSYTLSGALKICINYVNLRLGLQ-VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAH 397
Query: 448 KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNM----- 502
K+ +P + L+ GC G L L +L + D I+SN+
Sbjct: 398 KLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDAD--QFIVSNILKVCS 454
Query: 503 -YAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAV 548
A LG W + ++ L ++G + EP + ++ V +D+ V
Sbjct: 455 SLASLG-WGK--QIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 37/302 (12%)
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
K G+ +QA V + +++ N ++S Y++ R L +A +F E+ ERN++TWT M+SG
Sbjct: 22 KRGESIQAH-VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSG 80
Query: 265 LAESGFGEESLKLFNQM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV------- 316
G ++++L+ +M SE ++ Y+ +KACG++G + G ++ ++
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRG 140
Query: 317 ------------IQLGH----DSSL--------SAGNALITMYAKCGVVGYADMVFLTMP 352
++ G +SS ++ N LI+ Y K G++ A +F MP
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
+ VSWN +I+ G +A++ +M +E ++ D L ACS GL+ G+
Sbjct: 201 QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV--TESMPFEPSAPIWESLLAGCR 470
G+ + LID+ G A V E + S +W S+L+G
Sbjct: 260 -LHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 471 IH 472
I+
Sbjct: 319 IN 320
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY 353
A ++ CG + + G+ I + VI+ G ++ N +I+MY ++ A VF M
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTILSACSHAGLVKEGQH 412
+ V+W M++ G+ +AI+LY +ML E+ + + +L AC G ++ G
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
++ + + ++D+ + G+ EA + + PS+ W +L++G
Sbjct: 129 VYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG 182
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 236/477 (49%), Gaps = 41/477 (8%)
Query: 56 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM- 114
Y+C A ++ + + AR+LFD +S++D SW +I Y + L A KLLD M
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 115 ---THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 171
V WN + G + G Y A + M + +++ + + A + G
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 172 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 231
G+ H V+R+ H I +V N+LIT Y++C L A VF ++ L +WN+I+
Sbjct: 338 WGKVFHCLVIRSC--SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
SG+ R EE F+ +E M G P
Sbjct: 396 SGFAYNERSEETSFLLKE-------------------------------MLLSGFHPNHI 424
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
A + +G+L +G++ H +++ + L N+L+ MYAK G + A VF +
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
M D V++ ++I + G+G A+ ++ M + I PD +T + +LSACSH+ LV+EG
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCR 470
F M +G+ +HY+ ++DL CRAG +A+ + ++P+EPS+ + +LL C
Sbjct: 545 HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACL 604
Query: 471 IHGNIELGIQAAER-LFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
IHGN +G AA++ L E PE G Y++L++MYA G W ++ V+ L+ + GV+K
Sbjct: 605 IHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 176/345 (51%), Gaps = 14/345 (4%)
Query: 116 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
HP+ WN +I Y+R+ ++E+ +++M S GI+ DE+TY S+I A F GR
Sbjct: 148 HPLP--WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
+H ++ S L V NALI+ Y + GK+ AR +FD+M RD VSWNAI++ Y
Sbjct: 206 VHG----SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 236 NARRLEEA----KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+ +L EA ++ E +++TW + G E+G +L M++ +
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQ---LGHDSSLSAGNALITMYAKCGVVGYADMVF 348
A +KAC +G+L G+ H VI+ HD + N+LITMY++C + +A +VF
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVF 380
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
+ +WN++I+ A + R + L ++ML P+ IT +IL + G ++
Sbjct: 381 QQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQ 440
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
G+ + + + L+D+ ++G+ AK+V +SM
Sbjct: 441 HGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 37/278 (13%)
Query: 130 VRHGLYEEAFDTFR--KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
+ HG EAF TF + S + Y+ SL+S F G+QLHA+ + + ++
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE- 115
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 247
F + L+TFY+ L +A+ + + + + WN ++ YI +R +E
Sbjct: 116 ---FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQE----- 167
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLD 307
S+ ++ +M S+G+ ++ Y IKAC L
Sbjct: 168 --------------------------SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 308 NGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALA 367
G+ +H + H +L NALI+MY + G V A +F M D+VSWNA+I
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
+ +A +L ++M + +T+ TI C AG
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 26/229 (11%)
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
Y+ A + C GQQ+H+ I G + L+T Y+ ++ A +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHA-----G 405
+ + WN +I + ++ R +++ +Y++M+ + I D T+ +++ AC+ G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 406 LVKEGQHYFDS-MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWES 464
V G S C Y LI + R GK A+++ + M E A W +
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNA-------LISMYKRFGKVDVARRLFDRMS-ERDAVSWNA 255
Query: 465 LLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVA 513
++ C + E+L E D Y LS + A + W+ +A
Sbjct: 256 II-NC---------YTSEEKLGEAFKLLDRMY--LSGVEASIVTWNTIA 292
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 236/477 (49%), Gaps = 41/477 (8%)
Query: 56 YICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGM- 114
Y+C A ++ + + AR+LFD +S++D SW +I Y + L A KLLD M
Sbjct: 220 YVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 115 ---THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFN 171
V WN + G + G Y A + M + +++ + + A + G
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 172 CGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL 231
G+ H V+R+ H I +V N+LIT Y++C L A VF ++ L +WN+I+
Sbjct: 338 WGKVFHCLVIRSC--SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 232 SGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
SG+ R EE F+ +E M G P
Sbjct: 396 SGFAYNERSEETSFLLKE-------------------------------MLLSGFHPNHI 424
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQL-GHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
A + +G+L +G++ H +++ + L N+L+ MYAK G + A VF +
Sbjct: 425 TLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
M D V++ ++I + G+G A+ ++ M + I PD +T + +LSACSH+ LV+EG
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCR 470
F M +G+ +HY+ ++DL CRAG +A+ + ++P+EPS+ + +LL C
Sbjct: 545 HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACL 604
Query: 471 IHGNIELGIQAAER-LFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
IHGN +G AA++ L E PE G Y++L++MYA G W ++ V+ L+ + GV+K
Sbjct: 605 IHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 176/345 (51%), Gaps = 14/345 (4%)
Query: 116 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
HP+ WN +I Y+R+ ++E+ +++M S GI+ DE+TY S+I A F GR
Sbjct: 148 HPLP--WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
+H ++ S L V NALI+ Y + GK+ AR +FD+M RD VSWNAI++ Y
Sbjct: 206 VHG----SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 236 NARRLEEA----KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+ +L EA ++ E +++TW + G E+G +L M++ +
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQ---LGHDSSLSAGNALITMYAKCGVVGYADMVF 348
A +KAC +G+L G+ H VI+ HD + N+LITMY++C + +A +VF
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVF 380
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
+ +WN++I+ A + R + L ++ML P+ IT +IL + G ++
Sbjct: 381 QQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQ 440
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
G+ + + + L+D+ ++G+ AK+V +SM
Sbjct: 441 HGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 37/278 (13%)
Query: 130 VRHGLYEEAFDTFR--KMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
+ HG EAF TF + S + Y+ SL+S F G+QLHA+ + + ++
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE- 115
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIF 247
F + L+TFY+ L +A+ + + + + WN ++ YI +R +E
Sbjct: 116 ---FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQE----- 167
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLD 307
S+ ++ +M S+G+ ++ Y IKAC L
Sbjct: 168 --------------------------SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFA 201
Query: 308 NGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALA 367
G+ +H + H +L NALI+MY + G V A +F M D+VSWNA+I
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
+ +A +L ++M + +T+ TI C AG
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 26/229 (11%)
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
Y+ A + C GQQ+H+ I G + L+T Y+ ++ A +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHA-----G 405
+ + WN +I + ++ R +++ +Y++M+ + I D T+ +++ AC+ G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 406 LVKEGQHYFDS-MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWES 464
V G S C Y LI + R GK A+++ + M E A W +
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNA-------LISMYKRFGKVDVARRLFDRMS-ERDAVSWNA 255
Query: 465 LLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVA 513
++ C + E+L E D Y LS + A + W+ +A
Sbjct: 256 II-NC---------YTSEEKLGEAFKLLDRMY--LSGVEASIVTWNTIA 292
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 260/574 (45%), Gaps = 87/574 (15%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ DG PD +F L + + E + LHC +VK G + L++ Y+ C
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMG-RMLHCQIVKTGFDVDMHLKTALITMYLKCG 294
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
K+E S+ ++L+ + + V
Sbjct: 295 -------------------------KEEASY-----------------RVLETIPNKDVV 312
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
W MISG +R G E+A F +M G + S++++ G F+ G +H YV
Sbjct: 313 CWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYV 372
Query: 181 LR---TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINA 237
LR T+ P+ N+LIT Y KCG
Sbjct: 373 LRHGYTLDTPAL-------NSLITMYAKCG------------------------------ 395
Query: 238 RRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCD-YAYAGA 296
L+++ IF + ER+L++W +ISG A++ ++L LF +MK + ++ D +
Sbjct: 396 -HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSL 454
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
++AC G+L G+ IH VI+ AL+ MY+KCG + A F ++ + D
Sbjct: 455 LQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
VSW +IA HG+G A+++Y + L + P+ + FL +LS+CSH G+V++G F S
Sbjct: 515 VSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSS 574
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
M +G+ P +H A ++DLLCRA + +A K + PS + +L CR +G E
Sbjct: 575 MVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
+ E + EL P G Y+ L + +A + +WD+V+ MR G+KK PG S IE+
Sbjct: 635 VEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMN 694
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLG 570
F ++ H + L+ L EM + G
Sbjct: 695 GKTTTFFMNHTSHSD--DTVSLLKLLSREMMQFG 726
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 179/395 (45%), Gaps = 38/395 (9%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D +M+ Y + D + A+ L D M V+WN MISGY G E +M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G++ D+ T+ + +S S GR LH +++T H + ALIT Y KC
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH----LKTALITMYLKC 293
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
GK + V + +P +D+V W ++SG + R E+A +F E
Sbjct: 294 GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE----------------- 336
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
M G + A A + +C LGS D G +H V++ G+
Sbjct: 337 --------------MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM-LKE 385
A N+LITMYAKCG + + ++F M D VSWNA+I+ AQ+ +A+ L+E+M K
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKT 442
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
D T +++L ACS AG + G+ + + P L+D+ + G
Sbjct: 443 VQQVDSFTVVSLLQACSSAGALPVGK-LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEA 501
Query: 446 AKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
A++ +S+ ++ W L+AG HG ++ ++
Sbjct: 502 AQRCFDSISWKDVVS-WGILIAGYGFHGKGDIALE 535
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 178/413 (43%), Gaps = 40/413 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++++ Y + LA ARK+ + M V W AMI Y R G+ EA +M GI+
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
T ++S C LH + + + C
Sbjct: 145 PGPVTLLEMLSGVLEITQLQC---LHDFA-------------------VIYGFDC----- 177
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
D+ N++L+ Y + +AK +F ++ +R++++W MISG A G
Sbjct: 178 -----------DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM 226
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E LKL +M+ +GL P + ++ G + L+ G+ +H Q+++ G D + AL
Sbjct: 227 SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTAL 286
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
ITMY KCG + V T+P D V W MI+ L + GR +A+ ++ +ML+
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+++++C+ G G + H G T LI + + G ++ + E
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRH-GYTLDTPALNSLITMYAKCGHLDKSLVIFE 405
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYA 504
M E W ++++G + ++ + E + T +Q ++ ++S + A
Sbjct: 406 RMN-ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA 457
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 17/238 (7%)
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH 321
I+ L+ G ++ L F+ M + L P + + +KAC L L G IH QV+ G
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 322 DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
S ++L+ +YAK G++ +A VF M D V W AMI ++ G +A L +
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 382 MLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH-----YGMTPGEDHYARLIDL 436
M + I P +T L +LS G+++ Q C H YG +++L
Sbjct: 138 MRFQGIKPGPVTLLEMLS-----GVLEITQ----LQCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 437 LCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLF--ELTPEQ 492
C+ +AK + + M + W ++++G GN+ ++ R+ L P+Q
Sbjct: 189 YCKCDHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ 245
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 258/536 (48%), Gaps = 58/536 (10%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M G P + ++VL A + E + +H +K G+ V L+ Y
Sbjct: 95 MHNSGIPPSSHAVTSVLRACGKM-ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLG 153
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
L A+K FD+ +++K+ SW +++ GY+ + +L AR++ D + AV
Sbjct: 154 YIEL---------AKKAFDD--IAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 202
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+WN +IS Y + G A F M
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAM----------------------------------- 227
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
+ P+ N LI Y C ++ AR FD MP ++ VSW ++SGY +
Sbjct: 228 --PLKSPASW------NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM--KSEGLEPCDYAYAGAIK 298
+ A+ +FR + +++ L + MI+ ++G +++LKLF QM ++ ++P + + +
Sbjct: 280 QSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVS 339
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
A LG+ G + S + + G +LI +Y K G A +F + D+VS
Sbjct: 340 ANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS 399
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
++AMI +G +A L+ M+++ I P+ +TF +LSA SH+GLV+EG F+SM
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELG 478
H + P DHY ++D+L RAG+ EA ++ +SMP +P+A +W +LL +H N+E G
Sbjct: 460 DH-NLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFG 518
Query: 479 IQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIE 534
A +L + G L+ +Y+ +G+WD+ VR ++E+ + K GCSW+E
Sbjct: 519 EIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 208/425 (48%), Gaps = 25/425 (5%)
Query: 108 RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNT 167
+++L G + +W ++ +H ++E D + MH+ GI + TS++ A
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 168 GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW 227
G+ +HA L+ + + V L+ Y++ G + A++ FD + ++ VSW
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVY----VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N++L GY+ + L+EA+ +F ++PE++ ++W ++IS A+ G + LF+ M +
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK--S 231
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS-SLSAGNALITM---YAKCGVVGY 343
P + ++G N +++ ++ + D+ G + ITM Y K G V
Sbjct: 232 PASWNI--------LIGGYVNCREM--KLARTYFDAMPQKNGVSWITMISGYTKLGDVQS 281
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED--ILPDRITFLTILSAC 401
A+ +F M D + ++AMIA Q+G+ A++L+ QML+ + I PD IT +++SA
Sbjct: 282 AEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSAN 341
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
S G G + +S T +G+ + LIDL + G F++A K+ ++ + +
Sbjct: 342 SQLGNTSFGT-WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS- 399
Query: 462 WESLLAGCRIHG-NIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
+ +++ GC I+G E + + P T+ L + Y+H G E + M+
Sbjct: 400 YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 521 ERGVK 525
+ ++
Sbjct: 460 DHNLE 464
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 156/342 (45%), Gaps = 22/342 (6%)
Query: 195 VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAIL-------SGYINARRLEEAKFIF 247
+++ L F +C L QA++V ++ V IL + + + K I
Sbjct: 2 LDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRIL 61
Query: 248 REVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLD 307
+ + +W ++ L++ +E++ ++ M + G+ P +A ++ACG + ++
Sbjct: 62 KGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMV 121
Query: 308 NGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALA 367
+G+ IH+Q ++ G + L+ +Y++ G + A F + ++VSWN+++
Sbjct: 122 DGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYL 181
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
+ G +A ++++++ ++D +++ I+S+ + G + F +M +P
Sbjct: 182 ESGELDEARRVFDKIPEKDA----VSWNLIISSYAKKGDMGNACSLFSAMPLK---SPAS 234
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+ LI + A+ ++MP + + W ++++G G+ +Q+AE LF
Sbjct: 235 --WNILIGGYVNCREMKLARTYFDAMP-QKNGVSWITMISGYTKLGD----VQSAEELFR 287
Query: 488 LTPEQDG-TYIILSNMYAHLGKWDEVARVRKLMRERGVKKEP 528
L ++D Y + Y GK + ++ M ER +P
Sbjct: 288 LMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 207/381 (54%), Gaps = 49/381 (12%)
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILS 232
GRQ+HA V + ++ + +L+ FY+ G + AR+VFD+ P
Sbjct: 84 GRQIHALVRKLGFNA----VIQIQTSLVGFYSSVGDVDYARQVFDETP------------ 127
Query: 233 GYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
++N++ WT MIS E+ E+++LF +M++E +E
Sbjct: 128 ------------------EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQ----LGHDSSLSAGNALITMYAKCGVVGYADMVF 348
A+ AC LG++ G++I+S+ I+ L D L+ N+L+ MY K G A +F
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD--LTLRNSLLNMYVKSGETEKARKLF 227
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED------ILPDRITFLTILSACS 402
D ++ +MI A +G+ ++++L+++M D I P+ +TF+ +L ACS
Sbjct: 228 DESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS 287
Query: 403 HAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIW 462
H+GLV+EG+ +F SM Y + P E H+ ++DL CR+G +A + MP +P+ IW
Sbjct: 288 HSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIW 347
Query: 463 ESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRER 522
+LL C +HGN+ELG + R+FEL + G Y+ LSN+YA G WDE +++R +R+R
Sbjct: 348 RTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR 407
Query: 523 GVKKEPGCSWIEIENMVHVFL 543
+ PG SWIE+ ++++ F+
Sbjct: 408 ---RMPGKSWIELGSIINEFV 425
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 138/312 (44%), Gaps = 52/312 (16%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVA-WNAMISGYVRHGLYEEAFDTFRKMHSMGI 150
T+++ Y D+ AR++ D + W AMIS Y + EA + F++M + I
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
++D T +SA + G G ++++ ++ + + L++ N+L+ Y K G+
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLA--MDLTLRNSLLNMYVKSGETE 221
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
+AR++FD+ +D+ T+T MI G A +G
Sbjct: 222 KARKLFDESMRKDVT-------------------------------TYTSMIFGYALNGQ 250
Query: 271 GEESLKLFNQMKS------EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
+ESL+LF +MK+ + P D + G + AC G ++ G++ +I D +
Sbjct: 251 AQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM---DYN 307
Query: 325 LSAGNA----LITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLY 379
L A ++ ++ + G + A MP ++V W ++ A + HG ++L
Sbjct: 308 LKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN----VELG 363
Query: 380 EQMLKEDILPDR 391
E++ + DR
Sbjct: 364 EEVQRRIFELDR 375
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 6/204 (2%)
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
+A + + SLD G+QIH+ V +LG ++ + +L+ Y+ G V YA VF P
Sbjct: 69 FAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 353 YVDS-VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
+ V W AMI+A ++ V+AI+L+++M E I D + LSAC+ G V+ G+
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 412 H-YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV-TESMPFEPSAPIWESLLAGC 469
Y S+ + L+++ ++G+ +A+K+ ESM + S++ G
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESM--RKDVTTYTSMIFGY 245
Query: 470 RIHGNIELGIQAAERLFELTPEQD 493
++G + ++ +++ + QD
Sbjct: 246 ALNGQAQESLELFKKMKTIDQSQD 269
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 227/437 (51%), Gaps = 43/437 (9%)
Query: 103 DLASARKLLDGMTHPIAV-AWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSL 160
DL SA L+ M+ + +WN++ISG G + E+ F+ M G I+ D T
Sbjct: 528 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 220
ISAS N GL GR H ++++ + + N LIT Y +C
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLRELDTQ----LQNTLITMYGRC-------------- 629
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
+ +E A +F + + NL +W +IS L+++ G E +LF
Sbjct: 630 -----------------KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRN 672
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
+K LEP + + G + A LGS G Q H +I+ G ++ AL+ MY+ CG+
Sbjct: 673 LK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGM 729
Query: 341 VGYADMVFLTMPYVDSVS-WNAMIAALAQHGRGVQAIQLYEQML-KEDILPDRITFLTIL 398
+ VF V+S+S WN++I+A HG G +A++L++++ ++ P++ +F+++L
Sbjct: 730 LETGMKVFRN-SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 399 SACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
SACSH+G + EG Y+ M +G+ P +H ++D+L RAGK EA + +
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK 848
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKL 518
A +W +LL+ C HG+ +LG + AE LFE+ P+ YI L+N Y LG W+E R+RK+
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKM 908
Query: 519 MRERGVKKEPGCSWIEI 535
+ + +KK PG S I++
Sbjct: 909 VEDNALKKLPGYSVIDV 925
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 59/382 (15%)
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTY 157
Y + ++L+SA + M H V+WN +++ + +G ++ F+ M G + D T+
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 158 TSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD 217
+ +ISA + G LH V+++ P H +SV N++I+ Y+KCG
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAH--VSVGNSIISMYSKCGDT-------- 342
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
E A+ +F E+ R++++ +++G A +G EE+ +
Sbjct: 343 -----------------------EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGI 379
Query: 278 FNQMKS-EGLEPCDYAYAGAIKA-CGVLGSLDNGQQIHSQVIQLGHDS-SLSAGNALITM 334
NQM+S + ++P D A +I + CG L G+ +H +++ S +L N++I M
Sbjct: 380 LNQMQSVDKIQP-DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILP--DRI 392
Y KCG+ A+++F T + D VSWN+MI+A +Q+G +A L+++++ E
Sbjct: 439 YGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 393 TFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTES 452
T L IL++C + DS+ + L R SE + +T
Sbjct: 499 TVLAILTSCDSS----------DSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTS- 547
Query: 453 MPFEPSAPIWESLLAGCRIHGN 474
W S+++GC G+
Sbjct: 548 ---------WNSVISGCASSGH 560
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 146/330 (44%), Gaps = 40/330 (12%)
Query: 86 KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+D + + ++ Y R +L S+ L D + + WN+MI+ ++G Y A F +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT-VVQPSEHFILSVNNALITFYT 204
G + D T SA + L LH + T +V S S+ NAL+ Y
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS-----SLCNALMNLYA 234
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
K L A VF M RD+VSWN T+M
Sbjct: 235 KGENLSSAECVFTHMEHRDIVSWN------------------------------TIMTKC 264
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH--D 322
LA +G +SL+ F M G E ++ I AC + L G+ +H VI+ G+ +
Sbjct: 265 LA-NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQM 382
+ +S GN++I+MY+KCG A+ VF + D +S NA++ A +G +A + QM
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Query: 383 LKED-ILPDRITFLTILSACSHAGLVKEGQ 411
D I PD T ++I S C +EG+
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGR 413
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 209/511 (40%), Gaps = 97/511 (18%)
Query: 53 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPS-WTTMIAGYVRNDDLASARKLL 111
SC I SS +E L S L ++ S + S ++I+ Y + D +A +
Sbjct: 292 FSCVISACSS--IEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVF 349
Query: 112 DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG-IQMDEYTYTSLISASFNTGLF 170
+ + ++ NA+++G+ +G++EEAF +M S+ IQ D T S+ S +
Sbjct: 350 EELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFS 409
Query: 171 NCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAI 230
GR +H Y +R +Q L V N++I Y KCG QA +F RDLVSWN++
Sbjct: 410 REGRAVHGYTVRMEMQSRA---LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 231 LSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCD 290
+S + +AK +F+EV +S + S F ++ L CD
Sbjct: 467 ISAFSQNGFTHKAKNLFKEV-----------VSEYSCSKFSLSTVLAI-------LTSCD 508
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
+ SL G+ +H + +LG +S A + T
Sbjct: 509 SS-----------DSLIFGKSVHCWLQKLGDLTS-------------------AFLRLET 538
Query: 351 MPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACSHAGLVK 408
M D SWN++I+ A G +++++ ++ M +E I D IT L +SA + GLV
Sbjct: 539 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 598
Query: 409 EGQHYF---------------DSMCTHYGMTPGEDHYARLIDLL---------CRAGKFS 444
+G+ + +++ T YG + ++ L+ C S
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 445 EAKKVTE------SMPFEPSAPIWESLLAGCRIHGNIELGIQA----AERLFELTPEQDG 494
+ K E ++ EP+ + LL+ G+ G+QA R F+ P
Sbjct: 659 QNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA 718
Query: 495 TYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
+ +MY+ G + +V R GV
Sbjct: 719 ALV---DMYSSCGMLETGMKV---FRNSGVN 743
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 17/255 (6%)
Query: 202 FYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVM 261
F KCG L +DL + + +L+ Y L + +F E+ E++++ W M
Sbjct: 112 FALKCGLL------------QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSM 159
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH 321
I+ L ++G ++ LF +M +G E A A L +H I+ G
Sbjct: 160 ITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL 219
Query: 322 DSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
S NAL+ +YAK + A+ VF M + D VSWN ++ +G +++Q ++
Sbjct: 220 VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS 279
Query: 382 MLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA---RLIDLLC 438
M D +TF ++SACS + G+ + G +P E H + +I +
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGES-LHGLVIKSGYSP-EAHVSVGNSIISMYS 337
Query: 439 RAGKFSEAKKVTESM 453
+ G A+ V E +
Sbjct: 338 KCGDTEAAETVFEEL 352
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/406 (31%), Positives = 215/406 (52%), Gaps = 13/406 (3%)
Query: 139 FDTFRKMHSMGIQ------MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI 192
+D +++H + D +TY L+ AS N + + + L + H
Sbjct: 100 YDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESH-- 157
Query: 193 LSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE 252
+ V AL+ Y G ++ A +VFD+MP R+ V+WN +++G N E+A ++P
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 253 RNLLTWTVMISGLAESGFGEESLKLFNQMKS-EGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
R +++WT +I G A +E++ LF++M + + ++P + + A LG L
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 312 IHSQVIQLGH-DSSLSAGNALITMYAKCGVVGYADMVFLTMP--YVDSVSWNAMIAALAQ 368
+H+ V + G + N+LI YAKCG + A F+ +P + VSW MI+A A
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG-QHYFDSMCTHYGMTPGE 427
HG G +A+ +++ M + + P+R+T +++L+ACSH GL +E +F++M Y +TP
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
HY L+D+L R G+ EA+K+ +P E A +W LL C ++ + EL + +L E
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
Query: 488 LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWI 533
L G Y+++SN++ G++ + R RK M RGV K PG S +
Sbjct: 458 LERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYV 130
M A K+FDE P +++ +W MI G D A L+ M + V+W +I GY
Sbjct: 174 MIDAHKVFDEMP--ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 131 RHGLYEEAFDTFRKMHSM-GIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSE 189
R +EA F +M + I+ +E T +++ A +N G +HAYV + P +
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 190 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 249
+ V N+LI Y KCG + A + F ++P N R
Sbjct: 292 ---IRVTNSLIDAYAKCGCIQSAFKFFIEIP---------------NGR----------- 322
Query: 250 VPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC--GVLGSLD 307
+NL++WT MIS A G G+E++ +F M+ GL+P + AC G L +
Sbjct: 323 ---KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEE 379
Query: 308 NGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD-SVSWNAMIAA 365
+ ++ V + + L+ M + G + A+ + L +P + +V W ++ A
Sbjct: 380 FLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 232/451 (51%), Gaps = 51/451 (11%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMG 149
S T +I Y + L + ++ + + V+WNA++SG++R+G +EA F M+
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 150 IQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKL 209
+++ E+T +S++ + + G+Q+HA V VV + +L A+I+FY+ G +
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMV---VVTGRDLVVLG--TAMISFYSSVGLI 235
Query: 210 VQAREVFDKMPVR-DLVSWNAILSGYINARRLEEAKFIF-REVPERNLLTWTVMISGLAE 267
+A +V++ + V D V N+++SG I R +EA + R+ P +L+
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLS---------- 285
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
++ C L G+QIH ++ G S
Sbjct: 286 ---------------------------SSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL 318
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED- 386
N L+ MY KCG + A +F +P VSW +MI A A +G GV+A++++ +M +E
Sbjct: 319 CNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGS 378
Query: 387 -ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSE 445
+LP+ +TFL ++SAC+HAGLVKEG+ F M Y + PG +HY ID+L +AG+ E
Sbjct: 379 GVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEE 438
Query: 446 AKKVTESM--PFEPSAP--IWESLLAGCRIHGNIELGIQAAERLFELT-PEQDGTYIILS 500
++ E M S P IW ++L+ C ++ ++ G A RL E T PE Y+++S
Sbjct: 439 IWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVS 498
Query: 501 NMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
N YA +GKWD V +R ++ +G+ K G S
Sbjct: 499 NFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 178/399 (44%), Gaps = 53/399 (13%)
Query: 131 RHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEH 190
R G + F ++H + +T+T ++ A GRQ+HA +++ Q +E
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIK---QGAET 117
Query: 191 FILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREV 250
+S ALI Y+K G LV + VF+ + +DLVSWNA+LSG++
Sbjct: 118 GTIS-KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL--------------- 161
Query: 251 PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
RN G G+E+L +F M E +E ++ + +K C L L G+
Sbjct: 162 --RN--------------GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP-YVDSVSWNAMIAALAQH 369
Q+H+ V+ G D + G A+I+ Y+ G++ A V+ ++ + D V N++I+ ++
Sbjct: 206 QVHAMVVVTGRD-LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN 264
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDH 429
+A L + P+ + L+ CS + G+ + G
Sbjct: 265 RNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQ-IHCVALRNGFVSDSKL 318
Query: 430 YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELT 489
L+D+ + G+ +A+ + ++P S W S++ ++G+ G++A E E+
Sbjct: 319 CNGLMDMYGKCGQIVQARTIFRAIP-SKSVVSWTSMIDAYAVNGD---GVKALEIFREMC 374
Query: 490 PEQDG------TYIILSNMYAHLGKWDEVARVRKLMRER 522
E G T++++ + AH G E +M+E+
Sbjct: 375 EEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 114/230 (49%), Gaps = 8/230 (3%)
Query: 243 AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGV 302
A +F E+P+R+L + +S SG ++L LF Q+ + + + + AC +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 303 LGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAM 362
L + G+Q+H+ +I+ G ++ + ALI MY+K G + + VF ++ D VSWNA+
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 363 IAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
++ ++G+G +A+ ++ M +E + T +++ C+ ++++G+ +
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV----- 211
Query: 423 MTPGEDHY---ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
+ G D +I G +EA KV S+ + SL++GC
Sbjct: 212 VVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 219/444 (49%), Gaps = 47/444 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T +I+ Y + + A K + + AVA+NA+ GY + G +AFD ++ M G+
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D T ++ + G ++ +++ H V +ALI +TKC L
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECH----VAHALINMFTKCDALAA 555
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +FDK G+ E++ ++W +M++G G
Sbjct: 556 AIVLFDK-------------CGF-----------------EKSTVSWNIMMNGYLLHGQA 585
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EE++ F QMK E +P + ++A L +L G +HS +IQ G S GN+L
Sbjct: 586 EEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSL 645
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MYAKCG++ ++ F+ + VSWN M++A A HG A+ L+ M + ++ PD
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
++FL++LSAC HAGLV+EG+ F+ M + + +HYA ++DLL +AG F EA ++
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMR 765
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
M + S +W +LL R+H N+ L A +L +L P Y + LG+ +
Sbjct: 766 RMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY----SQDRRLGEVNN 821
Query: 512 VARVRKLMRERGVKKEPGCSWIEI 535
V+R++K+ P CSWIE+
Sbjct: 822 VSRIKKV---------PACSWIEV 836
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 191/438 (43%), Gaps = 49/438 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T++++ Y + +L A +L + V+W+AMI+ Y + G ++EA FR M + I+
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ T TS++ G+ +H Y ++ ++ L A+I+ Y KCG+
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE----LETATAVISMYAKCGRFSP 454
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A + F+++P++D V++NA+ GY + G
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGY-------------------------------TQIGDA 483
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
++ ++ MK G+ P G ++ C G ++ Q+I+ G DS +AL
Sbjct: 484 NKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHAL 543
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDS-VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
I M+ KC + A ++F + S VSWN M+ HG+ +A+ + QM E P+
Sbjct: 544 INMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSM--CTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
+TF+ I+ A + ++ G S+ C TP + L+D+ + G ++K
Sbjct: 604 AVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN---SLVDMYAKCGMIESSEK 660
Query: 449 VTESMPFEPSAPIWESLLAGCRIHG----NIELGIQAAERLFELTPEQDGTYIILSNMYA 504
+ + W ++L+ HG + L + E EL P+ +LS
Sbjct: 661 CFIEISNKYIVS-WNTMLSAYAAHGLASCAVSLFLSMQEN--ELKPDSVSFLSVLSAC-R 716
Query: 505 HLGKWDEVARVRKLMRER 522
H G +E R+ + M ER
Sbjct: 717 HAGLVEEGKRIFEEMGER 734
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 167/367 (45%), Gaps = 38/367 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T ++ Y + DL SAR++ D M V WN M+SG ++G A F M S +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+D + +LI A + R LH V++ + FI + ++ LI Y C L
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK------KGFIFAFSSGLIDMYCNCADLYA 252
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A VF+ EV ++ +W M++ A +GF
Sbjct: 253 AESVFE-------------------------------EVWRKDESSWGTMMAAYAHNGFF 281
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EE L+LF+ M++ + A A A++A +G L G IH +Q G +S +L
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
++MY+KCG + A+ +F+ + D VSW+AMIA+ Q G+ +AI L+ M++ I P+
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+T ++L C+ + G+ + + +I + + G+FS A K E
Sbjct: 402 VTLTSVLQGCAGVAASRLGKS-IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 452 SMPFEPS 458
+P + +
Sbjct: 461 RLPIKDA 467
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 38/287 (13%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYTYTSLISASF 165
+R + D + P V WN+MI GY R GL+ EA F M GI D+Y++T + A
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 225
+ F G ++H + ++ + + AL+ Y K LV AR+VFDKM V+D+V
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVY----IGTALVEMYCKARDLVSARQVFDKMHVKDVV 167
Query: 226 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
+WN M+SGLA++G +L LF+ M+S
Sbjct: 168 TWN-------------------------------TMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
++ + I A L D + +H VI+ G + S+G LI MY C + A+
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAE 254
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRI 392
VF + D SW M+AA A +G + ++L++ M D+ +++
Sbjct: 255 SVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 199 LITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTW 258
L+ +C +V + V L N +++ Y +R + ++ IF V + ++ W
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLW 67
Query: 259 TVMISGLAESGFGEESLKLFNQMKSE-GLEPCDYAYAGAIKACGVLGSLD--NGQQIHSQ 315
MI G +G E+L F M E G++P Y++ A+KAC GS+D G +IH
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA--GSMDFKKGLRIHDL 125
Query: 316 VIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
+ ++G +S + G AL+ MY K + A VF M D V+WN M++ LAQ+G A
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAA 185
Query: 376 IQLYEQMLKEDILPDRITFLTILSA-----------CSHAGLVKEGQHYFDSMCTHYGMT 424
+ L+ M + D ++ ++ A C H ++K+G + +
Sbjct: 186 LLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG--------FIFAFS 237
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAER 484
G LID+ C A+ V E + + W +++A +G E ++
Sbjct: 238 SG------LIDMYCNCADLYAAESVFEEV-WRKDESSWGTMMAAYAHNGFFEEVLE---- 286
Query: 485 LFELTPEQD 493
LF+L D
Sbjct: 287 LFDLMRNYD 295
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM 148
P +++ Y + + S+ K +++ V+WN M+S Y HGL A F M
Sbjct: 640 PVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN 699
Query: 149 GIQMDEYTYTSLISASFNTGLFNCGRQLHAYV--LRTVVQPSEHFILSVNNALITFYTKC 206
++ D ++ S++SA + GL G+++ + + EH+ ++ K
Sbjct: 700 ELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA-----CMVDLLGKA 754
Query: 207 GKLVQAREVFDKMPVRDLVS-WNAILS 232
G +A E+ +M V+ V W A+L+
Sbjct: 755 GLFGEAVEMMRRMRVKTSVGVWGALLN 781
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 216/443 (48%), Gaps = 36/443 (8%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ Y R L SA +L V +++S Y G + A F K + ++
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+D ++ + + G LH Y +++ + + N LIT Y+K
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV----NGLITMYSK------ 394
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
FD +E F+F ++ E L++W +ISG +SG
Sbjct: 395 ----FDD---------------------VETVLFLFEQLQETPLISWNSVISGCVQSGRA 429
Query: 272 EESLKLFNQMK-SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+ ++F+QM + GL P A + C L L+ G+++H ++ ++ A
Sbjct: 430 STAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA 489
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI MYAKCG A+ VF ++ + +WN+MI+ + G +A+ Y +M ++ + PD
Sbjct: 490 LIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPD 549
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
ITFL +LSAC+H G V EG+ F +M +G++P HYA ++ LL RA F+EA +
Sbjct: 550 EITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLI 609
Query: 451 ESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWD 510
M +P + +W +LL+ C IH +E+G A ++F L + G Y+++SN+YA WD
Sbjct: 610 WKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWD 669
Query: 511 EVARVRKLMRERGVKKEPGCSWI 533
+V RVR +M++ G G S I
Sbjct: 670 DVVRVRNMMKDNGYDGYLGVSQI 692
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 163/394 (41%), Gaps = 56/394 (14%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D +I+ Y + +L SA L M V+WN MI Y + GL EEA F+ M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
+++ T +L+SA + LH V++ + +SV +L+ Y++C
Sbjct: 245 EKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVND----ISVVTSLVCAYSRC 294
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
G LV A ++ +V +I+S Y A
Sbjct: 295 GCLVSAERLYASAKQDSIVGLTSIVSCY-------------------------------A 323
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
E G + ++ F++ + ++ A G + C +D G +H I+ G +
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 383
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQ-MLKE 385
N LITMY+K V +F + +SWN++I+ Q GR A +++ Q ML
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG 443
Query: 386 DILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDH------YARLIDLLCR 439
+LPD IT ++L+ CS + G+ +G T + LID+ +
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKEL-------HGYTLRNNFENENFVCTALIDMYAK 496
Query: 440 AGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHG 473
G +A+ V +S+ P W S+++G + G
Sbjct: 497 CGNEVQAESVFKSIK-APCTATWNSMISGYSLSG 529
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 114/225 (50%), Gaps = 6/225 (2%)
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSW----NAILSGYI 235
+LR+ + P+ HF +S+ T KL Q +V + L + ++L+ Y+
Sbjct: 39 LLRSSLTPN-HFTMSIFLQATTTSFNSFKL-QVEQVQTHLTKSGLDRFVYVKTSLLNLYL 96
Query: 236 NARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
+ A+ +F E+PER+ + W +I G + +G+ ++ KLF M +G P
Sbjct: 97 KKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVN 156
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
+ CG G + G+ +H + G + NALI+ Y+KC +G A+++F M
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+VSWN MI A +Q G +AI +++ M ++++ +T + +LSA
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 159/386 (41%), Gaps = 51/386 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ Y++ + SA+ L D M V WNA+I GY R+G +A+ F M G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
T +L+ G + GR +H ++ ++ V NALI+FY+KC +L
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ----VKNALISFYSKCAELGS 204
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
A +F +M + VSWN ++ Y + EEA +F+ + E+N+ V I L +
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS 264
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E L H V++ G + +S +L
Sbjct: 265 HEPL-------------------------------------HCLVVKCGMVNDISVVTSL 287
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ Y++CG + A+ ++ + V ++++ A+ G A+ + + + + D
Sbjct: 288 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 347
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTH-YGMTPGEDHYARLID-LLCRAGKFSEAKKV 449
+ + IL C K+ H M H Y + G +++ L+ KF + + V
Sbjct: 348 VALVGILHGC------KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETV 401
Query: 450 TESMPFEPSAPI--WESLLAGCRIHG 473
P+ W S+++GC G
Sbjct: 402 LFLFEQLQETPLISWNSVISGCVQSG 427
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 310 QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQH 369
+Q+ + + + G D + +L+ +Y K G V A M+F MP D+V WNA+I +++
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDH 429
G A +L+ ML++ P T + +L C G V +G+ + G+
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQV 188
Query: 430 YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELT 489
LI + + A+ + M + S W +++ G E I + +FE
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 490 PEQDGTYII 498
E II
Sbjct: 248 VEISPVTII 256
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 244/514 (47%), Gaps = 47/514 (9%)
Query: 71 MASARKLFDEAPLSQKDEPSWTTMIAGYV------------------------------- 99
+ +A LFDE P ++D SW TMI+G V
Sbjct: 86 LNNALDLFDEMP--ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 100 ------RNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
R+ + + G++ V WN+++ Y R G+++ A F M D
Sbjct: 144 SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME----DRD 199
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
++ LI + ++G + +QP E + +S+ ++ + + K QA
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE-YTVSMVVSICSDLRELSKGKQAL 258
Query: 214 EVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGE 272
+ KM + + + A + + RL+++ +FRE+ + + + MI + GE
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE 318
Query: 273 ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
++L+LF ++ + P + ++ + + + LD+G +HS VI+LG D + +L+
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLM 377
Query: 333 TMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML-KEDILPDR 391
MY K G V A VF D + WN +I LA++ R V+++ ++ Q+L + + PDR
Sbjct: 378 EMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDR 437
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+T + IL AC +AG V EG F SM +G+ PG +HYA +I+LLCR G +EAK + +
Sbjct: 438 VTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIAD 497
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDE 511
+PFEPS+ IWE +L G+ L A+ + E P+ Y++L +Y +W+
Sbjct: 498 KIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWEN 557
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVD 545
++R M E +K G S I IE+ V F D
Sbjct: 558 SVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 136/280 (48%), Gaps = 19/280 (6%)
Query: 197 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
N + Y K G ++ A ++FD +P ++ ++WN L G L A +F E+PER+++
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSL----DNGQQI 312
+W MISGL GF E +++F M+ + P ++ ++ +L SL +G+QI
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS-------ILASLVTCVRHGEQI 155
Query: 313 HSQVIQLGHDS-SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
H I G +L N+++ MY + GV YA VFLTM D VSWN +I + + G
Sbjct: 156 HGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGN 215
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
A+ + M + +I PD T ++S CS + +G+ ++C G
Sbjct: 216 KEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLG 274
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
ID+ FS+ ++ +S+ W+S+L I
Sbjct: 275 AGIDM------FSKCNRLDDSVKLFRELEKWDSVLCNSMI 308
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 146/331 (44%), Gaps = 45/331 (13%)
Query: 73 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 132
+A +LFD+ P K+ +W + G +N L +A L D M V+WN MISG V
Sbjct: 57 NALQLFDDIP--DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSC 114
Query: 133 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC---GRQLHAYVLRTVVQPSE 189
G +E F M I+ E+T++ L S L C G Q+H +
Sbjct: 115 GFHEYGIRVFFDMQRWEIRPTEFTFSILAS------LVTCVRHGEQIHG---NAICSGVS 165
Query: 190 HFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFRE 249
+ L V N+++ Y + G A VF M RD+VSWN
Sbjct: 166 RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNC-------------------- 205
Query: 250 VPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNG 309
+I ++SG E +L F M+ ++P +Y + + C L L G
Sbjct: 206 -----------LILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Query: 310 QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQH 369
+Q + I++G S+ A I M++KC + + +F + DSV N+MI + + H
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
G A++L+ + + + PD+ TF ++LS+
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 219/459 (47%), Gaps = 42/459 (9%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 62
R G PD FSF V+ + V K G P V N ++ Y+ S
Sbjct: 99 RCGIMPDAFSFPVVIKSAGRFG------ILFQALVEKLGFFKDPYVRNVIMDMYVKHESV 152
Query: 63 TLVESPVLMASARK----------------------LFDEAPLSQKDEPSWTTMIAGYVR 100
S RK LFD P + D SWT MI G+ +
Sbjct: 153 ESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMP--ENDVVSWTVMITGFAK 210
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 160
DL +ARK D M V+WNAM+SGY ++G E+A F M +G++ +E T+ +
Sbjct: 211 VKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIV 270
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP 220
ISA F L +++ + + V AL+ + KC + AR +F+++
Sbjct: 271 ISAC----SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELG 326
Query: 221 V-RDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFN 279
R+LV+WNA++SGY + A+ +F +P+RN+++W +I+G A +G +++ F
Sbjct: 327 TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386
Query: 280 QMKSEG-LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKC 338
M G +P + + ACG + L+ G I + + + S +LI MYA+
Sbjct: 387 DMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARG 446
Query: 339 GVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTIL 398
G + A VF M D VS+N + A A +G GV+ + L +M E I PDR+T+ ++L
Sbjct: 447 GNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Query: 399 SACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLL 437
+AC+ AGL+KEGQ F S+ P DHYA +DLL
Sbjct: 507 TACNRAGLLKEGQRIFKSI-----RNPLADHYA-CMDLL 539
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 181/402 (45%), Gaps = 56/402 (13%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
R + D +T P N+M + + + + + + GI D +++ +I ++
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 167 TG-LFNCGRQ--------------LHAYVLRTVVQPSEHFILSVN-------NALITFYT 204
G LF + + YV V+ + ++ N +I+ Y
Sbjct: 119 FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
K G +A ++FD MP D+VSW +++G+ + LE A+ F +PE+++++W M+SG
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGS------------------- 305
A++GF E++L+LFN M G+ P + + I AC
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 306 -------LD------NGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
LD + Q +LG +L NA+I+ Y + G + A +F TMP
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACSHAGLVKEGQ 411
+ VSWN++IA A +G+ AI+ +E M+ D PD +T +++LSAC H ++ G
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
D + + + + Y LI + R G EAK+V + M
Sbjct: 419 CIVDYIRKN-QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 79/295 (26%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
N I+ Y+ +E A+ +F ++ +R W VMISG + G EE+ KLF+ M
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMP----- 194
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
++ + + +IT +AK + A
Sbjct: 195 ----------------------------------ENDVVSWTVMITGFAKVKDLENARKY 220
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS----- 402
F MP VSWNAM++ AQ+G A++L+ ML+ + P+ T++ ++SACS
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 403 ----------------------------HAGL--VKEGQHYFDSMCTHYGMTPGEDHYAR 432
HA ++ + F+ + T + +
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT----WNA 336
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+I R G S A+++ ++MP + + W SL+AG +G L I+ E + +
Sbjct: 337 MISGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 218/417 (52%), Gaps = 13/417 (3%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
+N +I Y+ G Y+ + F M + +Q + T+ SLI A+ ++ + G LH L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 182 RTVVQPSEHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+ F+ V + + FY + G L +R++FD + +V+ N++L
Sbjct: 114 K------RGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM---KSEGLEPCDYAYAGA 296
++ A F+ +P ++++WT +I+G ++ G ++L +F +M + + P + +
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 297 IKACGVL--GSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
+ +C G + G+QIH V+ + + G AL+ MY K G + A +F +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+WNA+I+ALA +GR QA++++E M + P+ IT L IL+AC+ + LV G F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
S+C+ Y + P +HY ++DL+ RAG +A +S+PFEP A + +LL C+IH N
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 475 IELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
ELG ++L L P+ G Y+ LS A W E ++RK M E G++K P S
Sbjct: 408 TELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 11/231 (4%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+ + Y DL S+RK+ D + +P VA N+++ R+G + AF+ F++M
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPV---- 180
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVL---RTVVQPSEHFILSVNNALITF---YTK 205
D ++T++I+ GL + ++ R V+ P+E +SV ++ F +
Sbjct: 181 TDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIR 240
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
GK + V K + A+L Y A LE A IF ++ ++ + W +IS L
Sbjct: 241 LGKQIHGY-VMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISAL 299
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
A +G +++L++F MKS + P + AC +D G Q+ S +
Sbjct: 300 ASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 219/447 (48%), Gaps = 36/447 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
D+ + ++ Y + + A KL + P WN MI GY G +++ + F M
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G Q + YT +L S + L +HA+ L+ + + V AL+ Y++C
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSY----VGCALVNMYSRC 255
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLA 266
+ A VF+ + DLV+ ++ +I+G +
Sbjct: 256 MCIASACSVFNSISEPDLVACSS-------------------------------LITGYS 284
Query: 267 ESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLS 326
G +E+L LF +++ G +P A + +C L +G+++HS VI+LG + +
Sbjct: 285 RCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK 344
Query: 327 AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
+ALI MY+KCG++ A +F +P + VS+N++I L HG A + + ++L+
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
++PD ITF +L C H+GL+ +GQ F+ M + +G+ P +HY ++ L+ AGK EA
Sbjct: 405 LIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEA 464
Query: 447 KKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTY-IILSNMYAH 505
+ S+ + I +LL+ C +H N L AE + + E+ Y ++LSN+YA
Sbjct: 465 FEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYAR 524
Query: 506 LGKWDEVARVRKLMRERGVKKEPGCSW 532
G+WDEV R+R + E K PG SW
Sbjct: 525 YGRWDEVERLRDGISESYGGKLPGISW 551
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 167/411 (40%), Gaps = 46/411 (11%)
Query: 88 EPSWTTMIAG-YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
+P + T +A Y NDDL SARKL D WN++I Y + + F ++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 147 SMGIQMDEYTYTSL---ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
+ D +TY L S SF+T C +H + + + F +A++ Y
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRC---IHGIAIVSGLG----FDQICGSAIVKAY 151
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMIS 263
+K G +V+A ++F +P DL WN VMI
Sbjct: 152 SKAGLIVEASKLFCSIPDPDLALWN-------------------------------VMIL 180
Query: 264 GLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDS 323
G GF ++ + LFN M+ G +P Y L +H+ +++ DS
Sbjct: 181 GYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDS 240
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
G AL+ MY++C + A VF ++ D V+ +++I ++ G +A+ L+ ++
Sbjct: 241 HSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
PD + +L +C+ G+ S G+ + LID+ + G
Sbjct: 301 MSGKKPDCVLVAIVLGSCAELSDSVSGKE-VHSYVIRLGLELDIKVCSALIDMYSKCGLL 359
Query: 444 SEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTPEQ 492
A + +P E + + SL+ G +HG + + E L P++
Sbjct: 360 KCAMSLFAGIP-EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDE 409
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 216/449 (48%), Gaps = 44/449 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+ +++ Y R + AR D M V+WNAMI GY + + +F F+ M + G +
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
D +T+ SL+ AS +LH ++ S I S+ NA Y KCG L
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNA----YVKCGSLA- 266
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE-SGF 270
NA +L E +R+LL+ T +I+G ++ +
Sbjct: 267 ------------------------NAWKLHEG------TKKRDLLSCTALITGFSQQNNC 296
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI---QLGHDSSLSA 327
++ +F M + + + +K C + S+ G+QIH + Q+ D +L
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVAL-- 354
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDI 387
GN+LI MYAK G + A + F M D SW ++IA +HG +AI LY +M E I
Sbjct: 355 GNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERI 414
Query: 388 LPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK 447
P+ +TFL++LSACSH G + G +D+M +G+ E+H + +ID+L R+G EA
Sbjct: 415 KPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAY 474
Query: 448 KVTESMP--FEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAH 505
+ S S+ W + L CR HGN++L AA +L + P + YI L+++YA
Sbjct: 475 ALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAA 534
Query: 506 LGKWDEVARVRKLMRERG-VKKEPGCSWI 533
G WD RKLM+E G K PG S +
Sbjct: 535 NGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 188/421 (44%), Gaps = 46/421 (10%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y++ D+ ARKL D ++ V+W AMIS + R G + +A F++MH ++ +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
++TY S++ + + G G Q+H V + + L V +AL++ Y +CGK+
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGN----LIVRSALLSLYARCGKM---- 164
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
EEA+ F + ER+L++W MI G + +
Sbjct: 165 ---------------------------EEARLQFDSMKERDLVSWNAMIDGYTANACADT 197
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
S LF M +EG +P + + ++A V+ L+ ++H I+LG S + +L+
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGV-QAIQLYEQMLKEDILPDRI 392
Y KCG + A + D +S A+I +Q A +++ M++ D +
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEV 317
Query: 393 TFLTILSACSHAGLVKEGQ--HYF--DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
++L C+ V G+ H F S + + G LID+ ++G+ +A
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS----LIDMYAKSGEIEDAVL 373
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL-FELTPEQDGTYIILSNMYAHLG 507
E M E W SL+AG HGN E I R+ E D T++ L + +H G
Sbjct: 374 AFEEMK-EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTG 432
Query: 508 K 508
+
Sbjct: 433 Q 433
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEE----- 242
SE+++LS + Y K KL + V ++ L+ N+I +G+ + +L++
Sbjct: 5 SENYLLSP-----SLYLKALKLCSYQNVKKQLL---LIHGNSITNGFCSNLQLKDMLIDL 56
Query: 243 ---------AKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
A+ +F + +R++++WT MIS + G+ ++L LF +M E ++ + Y
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTY 116
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY 353
+K+C LG L G QIH V + +L +AL+++YA+CG + A + F +M
Sbjct: 117 GSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 354 VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
D VSWNAMI + + L++ ML E PD TF ++L A
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
Y A+K C IH I G S+L + LI +Y K G V +A +F +
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
D VSW AMI+ ++ G A+ L+++M +ED+ ++ T+ ++L +C G +KEG
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 413 YFDSMCTHYGMTPGE-DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
S+ G G + L+ L R GK EA+ +SM E W +++ G
Sbjct: 135 IHGSV--EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDG 188
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 185/366 (50%), Gaps = 29/366 (7%)
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
++C L SL++ +++H +Q N +I+M+ +C + A VF M D
Sbjct: 243 FESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDM 302
Query: 357 VSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDS 416
SW+ M+ A + +G G A+ L+E+M K + P+ TFLT+ AC+ G ++E +FDS
Sbjct: 303 DSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDS 362
Query: 417 MCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIE 476
M +G++P +HY ++ +L + G EA++ +PFEP+A WE++ R+HG+I+
Sbjct: 363 MKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDID 422
Query: 477 LGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIE 536
L E + ++ P + I + + + V +++ R +
Sbjct: 423 LEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNL------------ 470
Query: 537 NMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSE 596
F D+A + + + + Y+PDT+FVLHD++ E KE AL HSE
Sbjct: 471 ----TFYKDEA-------------KEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSE 513
Query: 597 KLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGEC 656
+LA+ YGI+ P T+ + KNLR+CGDCHN K +SK +G+C
Sbjct: 514 RLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKC 573
Query: 657 SCGNYW 662
SCG+YW
Sbjct: 574 SCGDYW 579
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 43/240 (17%)
Query: 134 LYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFIL 193
LY++A + K G D + L + N +++H + L++ +
Sbjct: 220 LYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP---- 271
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER 253
+NN +I+ + +C + A+ VFD M +D+ SW+ ++ Y
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAY------------------- 312
Query: 254 NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
+++G G+++L LF +M GL+P + + AC +G ++ +H
Sbjct: 313 ------------SDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLH 359
Query: 314 SQVIQLGHDSSLSAGNAL--ITMYAKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQHG 370
++ H S + L + + KCG + A+ +P+ + W AM HG
Sbjct: 360 FDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 189/353 (53%), Gaps = 6/353 (1%)
Query: 107 ARKLLDGMTHPIAVAWNAMI-SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 165
A + + + P WN MI S V H E M S Q D++T+ +I A
Sbjct: 71 ASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV 225
+ G Q+H ++ F N L+ Y KCGK R+VFDKMP R +V
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFF----QNTLMDLYFKCGKPDSGRKVFDKMPGRSIV 186
Query: 226 SWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
SW +L G ++ +L+ A+ +F ++P RN+++WT MI+ ++ +E+ +LF +M+ +
Sbjct: 187 SWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD 246
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
++P ++ ++A LGSL G+ +H + G G ALI MY+KCG + A
Sbjct: 247 VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDAR 306
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKE-DILPDRITFLTILSACSHA 404
VF M +WN+MI +L HG G +A+ L+E+M +E + PD ITF+ +LSAC++
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANT 366
Query: 405 GLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP 457
G VK+G YF M YG++P +H A +I LL +A + +A + ESM +P
Sbjct: 367 GNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 149/325 (45%), Gaps = 52/325 (16%)
Query: 9 DPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESP 68
D F+F V+ A L + Q+H +K G NTL+ Y C
Sbjct: 118 DKFTFPFVIKA-CLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPD----- 171
Query: 69 VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISG 128
S RK+FD+ P + SWTTM+ G V N L SA + + M V+W AMI+
Sbjct: 172 ----SGRKVFDKMP--GRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITA 225
Query: 129 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 188
YV++ +EAF FR+M ++ +E+T +L+ AS G + GR +H Y +
Sbjct: 226 YVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK------ 279
Query: 189 EHFILS--VNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFI 246
F+L + ALI Y+KCG L AR+VFD M + L +WN+
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS----------------- 322
Query: 247 FREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEG-LEPCDYAYAGAIKACGVLGS 305
MI+ L G GEE+L LF +M+ E +EP + G + AC G+
Sbjct: 323 --------------MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGN 368
Query: 306 LDNGQQIHSQVIQLGHDSSLSAGNA 330
+ +G + +++IQ+ S + NA
Sbjct: 369 VKDGLRYFTRMIQVYGISPIREHNA 393
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 11/231 (4%)
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS 356
++ C L +QIH+++I+ + LI++ + G YA +VF + +
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 357 VSWNAMIAALAQHGRGVQAIQLY-EQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
+WN MI +L+ + + +A+ L+ M+ D+ TF ++ AC + ++ G
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV-H 142
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
+ G L+DL + GK +KV + MP S W ++L G + +
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR-SIVSWTTMLYGLVSNSQL 201
Query: 476 ELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
+ +AE +F P ++ ++ + Y + DE ++ + M+ VK
Sbjct: 202 D----SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK 248
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 236/544 (43%), Gaps = 95/544 (17%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHC----QQLHCDVVKWGVMCVPSVLNTLLSCY 56
++ G D FSF T L + S C + LH ++ G M + N L+ Y
Sbjct: 116 LRAKGLTLDRFSFITTLKSCS-----RELCVSIGEGLHGIALRSGFMVFTDLRNALIHFY 170
Query: 57 ICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH 116
C ++ ARK+FDE P S
Sbjct: 171 CVCGK---------ISDARKVFDEMPQSVD------------------------------ 191
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
AV ++ +++GY++ A D FR M + ++ T S +SA + G +
Sbjct: 192 --AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESA 249
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYIN 236
H ++ + H I ALI Y K G + AR +FD +D+V
Sbjct: 250 HVLCIKIGLDLDLHLI----TALIGMYGKTGGISSARRIFDCAIRKDVV----------- 294
Query: 237 ARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
TW MI A++G EE + L QMK E ++P + G
Sbjct: 295 --------------------TWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGL 334
Query: 297 IKACGVLGSLDNGQQIHSQVIQ--LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
+ +C + G+ + + + + D+ L G AL+ MYAK G++ A +F M
Sbjct: 335 LSSCAYSEAAFVGRTVADLLEEERIALDAIL--GTALVDMYAKVGLLEKAVEIFNRMKDK 392
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKED--ILPDRITFLTILSACSHAGLVKEGQH 412
D SW AMI+ HG +A+ L+ +M +E+ + P+ ITFL +L+ACSH GLV EG
Sbjct: 393 DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIR 452
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIH 472
F M Y TP +HY ++DLL RAG+ EA ++ ++P + W +LLA CR++
Sbjct: 453 CFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVY 512
Query: 473 GNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSW 532
GN +LG RL E+ I+L+ +A G E + +L + R KE G S
Sbjct: 513 GNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN-PEKSLDNELNKGR---KEAGYSA 568
Query: 533 IEIE 536
IEIE
Sbjct: 569 IEIE 572
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 182/424 (42%), Gaps = 43/424 (10%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
D+ A + + +++ +N MI GY E AF F ++ + G+ +D +++ + +
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
+ + G LH LR+ + NALI FY CGK+ AR+VFD+MP
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFM----VFTDLRNALIHFYCVCGKISDARKVFDEMPQS 189
Query: 223 -DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
D V+++ +++GY+ +V ++ L +L LF M
Sbjct: 190 VDAVTFSTLMNGYL-------------QVSKKAL------------------ALDLFRIM 218
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
+ + + A LG L + H I++G D L ALI MY K G +
Sbjct: 219 RKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGI 278
Query: 342 GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
A +F D V+WN MI A+ G + + L QM E + P+ TF+ +LS+C
Sbjct: 279 SSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC 338
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPI 461
+++ G+ D + + L+D+ + G +A ++ M +
Sbjct: 339 AYSEAAFVGRTVAD-LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKS 396
Query: 462 WESLLAGCRIHG----NIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
W ++++G HG + L + E ++ P + T++++ N +H G E R K
Sbjct: 397 WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI-TFLVVLNACSHGGLVMEGIRCFK 455
Query: 518 LMRE 521
M E
Sbjct: 456 RMVE 459
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 46/346 (13%)
Query: 217 DKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLK 276
D V L++++++L + A IF V NL + MI G + S E +
Sbjct: 59 DDFAVSKLLAFSSVLD-------IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFS 111
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
+FNQ++++GL +++ +K+C + G+ +H ++ G NALI Y
Sbjct: 112 VFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYC 171
Query: 337 KCGVVGYADMVFLTMPY-VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFL 395
CG + A VF MP VD+V+++ ++ Q + A+ L+ M K +++ + T L
Sbjct: 172 VCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLL 231
Query: 396 TILSACSHAGLVKEGQ---------------HYFDSMCTHYGMTPGEDHYAR-------- 432
+ LSA S G + + H ++ YG T G R
Sbjct: 232 SFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRK 291
Query: 433 -------LIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAA 482
+ID + G E + M +E P++ + LL+ C +G A
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 483 ERLFELTPEQD---GTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
+ L E D GT ++ +MYA +G ++ + M+++ VK
Sbjct: 352 DLLEEERIALDAILGTALV--DMYAKVGLLEKAVEIFNRMKDKDVK 395
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 210/454 (46%), Gaps = 48/454 (10%)
Query: 33 LHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWT 92
+H VK V+ V ++ Y+ C + SAR++FD+ KD SWT
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDR---------LESARRVFDQT--RSKDLKSWT 333
Query: 93 TMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQM 152
+ ++GY + AR+L D M V+WNAM+ GYV ++EA D M +
Sbjct: 334 SAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENI 393
Query: 153 DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQA 212
D T +++ G+Q H ++ R + + V NAL+ Y KCG L
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN----VIVANALLDMYGKCGTL--- 446
Query: 213 REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE-RNLLTWTVMISGLAESGFG 271
+ A FR++ E R+ ++W +++G+A G
Sbjct: 447 ----------------------------QSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E++L F M+ E +P Y A + C + +L+ G+ IH +I+ G+ + A+
Sbjct: 479 EQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAM 537
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ MY+KC YA VF D + WN++I ++GR + +L+ + E + PD
Sbjct: 538 VDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDH 597
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
+TFL IL AC G V+ G YF SM T Y ++P +HY +I+L C+ G + ++
Sbjct: 598 VTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLL 657
Query: 452 SMPFEPSAPIWESLLAGCRIHGNIELGIQAAERL 485
MPF+P + + C+ + +LG AA+RL
Sbjct: 658 LMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 225/514 (43%), Gaps = 82/514 (15%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M RDG SF+ VL + LI + +QLHC VVK+G + +++ Y C
Sbjct: 153 MNRDGVRATETSFAGVLKSCGLILDLRL-LRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAV 120
+M+ AR++F D + +P V
Sbjct: 212 ---------VMSDARRVF---------------------------------DEIVNPSDV 229
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+WN ++ Y+ G +EA F KM + ++ +T +S++ A + G+ +HA
Sbjct: 230 SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRL 240
++ V V+ ++ Y KC +L AR VFD+ +DL SW + +SGY +
Sbjct: 290 VKLSVVADT----VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
EA+ +F +PERN+++W M+ G + +E+L M+ E + + C
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSW 359
+ + G+Q H + + G+D+++ NAL+ MY KCG + A++ F M + D VSW
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS-----------HAGLVK 408
NA++ +A+ GR QA+ +E M E P + T T+L+ C+ H L++
Sbjct: 466 NALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 409 EG------------QHYFDSMCTHYGMTPGEDHYAR-------LIDLLCRAGKFSEAKK- 448
+G Y C Y + ++ R +I CR G+ E +
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 449 --VTESMPFEPSAPIWESLLAGCRIHGNIELGIQ 480
+ E+ +P + +L C G++ELG Q
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQ 618
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 167/341 (48%), Gaps = 23/341 (6%)
Query: 209 LVQAREVFDKM----PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
+VQAR+V + P+ + N + Y +++A+ +F E+PER+ +W +I+
Sbjct: 77 VVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA 136
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
A++G +E ++F +M +G+ + ++AG +K+CG++ L +Q+H V++ G+ +
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
+ +++ +Y KC V+ A VF + VSWN ++ + G +A+ ++ +ML+
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE 256
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
++ P T +++ ACS + ++ G+ ++ + + D+ + +
Sbjct: 257 LNVRPLNHTVSSVMLACSRSLALEVGK-VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMY 503
A++V + W S ++G + G + A LF+L PE++ ++ + Y
Sbjct: 316 SARRVFDQTR-SKDLKSWTSAMSGYAMSGL----TREARELFDLMPERNIVSWNAMLGGY 370
Query: 504 AHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLV 544
H +WDE LMR+ EIEN+ +V LV
Sbjct: 371 VHAHEWDEALDFLTLMRQ------------EIENIDNVTLV 399
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 161/420 (38%), Gaps = 67/420 (15%)
Query: 95 IAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 154
I Y + + AR+L + M +WNA+I+ ++G+ +E F FR+M+ G++ E
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 155 YTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQARE 214
++ ++ + RQLH V++ + + + +++ Y KC + AR
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN----VDLETSIVDVYGKCRVMSDARR 218
Query: 215 VFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEES 274
VFD++ VSWN I+ Y+ E GF +E+
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYL-------------------------------EMGFNDEA 247
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
+ +F +M + P ++ + + AC +L+ G+ IH+ ++L + ++ M
Sbjct: 248 VVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDM 307
Query: 335 YAKC-------------------------------GVVGYADMVFLTMPYVDSVSWNAMI 363
Y KC G+ A +F MP + VSWNAM+
Sbjct: 308 YVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAML 367
Query: 364 AALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGM 423
+A+ M +E D +T + IL+ CS V+ G+ + H G
Sbjct: 368 GGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRH-GY 426
Query: 424 TPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAE 483
L+D+ + G A M W +LL G G E + E
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE 486
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 7/183 (3%)
Query: 287 EPCDY-AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
EP Y Y ++C + +++ S ++ + N I Y KCG V A
Sbjct: 57 EPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDAR 116
Query: 346 MVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
+F MP D SWNA+I A AQ+G + +++ +M ++ + +F +L +C G
Sbjct: 117 ELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---G 173
Query: 406 LVKEGQHYFDSMC--THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWE 463
L+ + + C YG + D ++D+ + S+A++V + + PS W
Sbjct: 174 LILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWN 232
Query: 464 SLL 466
++
Sbjct: 233 VIV 235
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 166/322 (51%), Gaps = 16/322 (4%)
Query: 228 NAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAE-----SGFGEESLKLFNQMK 282
+L Y L A+ +F E+PER +TW MI G + +++ LF +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 283 --SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA--GNALITMYAKC 338
G+ P D + A G L+ G +H + +LG + G AL+ MY+KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 339 GVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTIL 398
G + A VF M + +W +M LA +GRG + L +M + I P+ ITF ++L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 399 SACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
SA H GLV+EG F SM T +G+TP +HY ++DLL +AG+ EA + +MP +P
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-------TYIILSNMYAHLGKWDE 511
A + SL C I+G +G + + L E+ E + Y+ LSN+ AH GKW E
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 512 VARVRKLMRERGVKKEPGCSWI 533
V ++RK M+ER +K PG S++
Sbjct: 451 VEKLRKEMKERRIKTRPGYSFV 472
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 130/302 (43%), Gaps = 42/302 (13%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHG-----LYEEAFDTFRKMH 146
TT++ Y +N DL ARK+ D M +V WNAMI GY H +A FR+
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 147 --SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
G++ + T ++SA TGL G +H Y+ + P + AL+ Y+
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF--IGTALVDMYS 268
Query: 205 KCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISG 264
KCG L A VF+ M V+ N+ TWT M +G
Sbjct: 269 KCGCLNNAFSVFELMKVK-------------------------------NVFTWTSMATG 297
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI-HSQVIQLGHDS 323
LA +G G E+ L N+M G++P + + + A +G ++ G ++ S + G
Sbjct: 298 LALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTP 357
Query: 324 SLSAGNALITMYAKCGVVGYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQM 382
+ ++ + K G + A L MP D++ ++ A + +G V ++ + +
Sbjct: 358 VIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKAL 417
Query: 383 LK 384
L+
Sbjct: 418 LE 419
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 23/233 (9%)
Query: 306 LDNGQQIHSQVIQLG--HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMI 363
L G+ +H V +LG ++S L G L+ YAK G + YA VF MP SV+WNAMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 364 AALAQHG-----RGVQAIQLYEQM--LKEDILPDRITFLTILSACSHAGLVKEG---QHY 413
H +A+ L+ + + P T + +LSA S GL++ G Y
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 414 FDSMCTHYGMTPGEDHY--ARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
+ + G TP D + L+D+ + G + A V E M + + W S+ G +
Sbjct: 246 IEKL----GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLAL 300
Query: 472 HGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRER 522
+G R+ E + P + T+ L + Y H+G +E + K M+ R
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEI-TFTSLLSAYRHIGLVEEGIELFKSMKTR 352
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 50/479 (10%)
Query: 73 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRH 132
S R+ FD A D ++I Y + D+ SA ++ D T V+WN++++G+V +
Sbjct: 252 SIRRGFDLA-----DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN 306
Query: 133 GLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-SFNTGLFNCGRQLHAYVLRTVVQPSEHF 191
Y+EA + F M +++DE T SL+ F C + +H ++R + +E
Sbjct: 307 QRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC-KSIHGVIIRRGYESNEVA 365
Query: 192 ILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP 251
+ ++LI YT C + A V D M +D+VS + ++SG
Sbjct: 366 L----SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISG------------------ 403
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
LA +G +E++ +F M+ P + AC V L +
Sbjct: 404 -------------LAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKW 447
Query: 312 IHSQVIQLGHD-SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHG 370
H I+ + +S G +++ YAKCG + A F + + +SW +I+A A +G
Sbjct: 448 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING 507
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+A+ L+++M ++ P+ +T+L LSAC+H GLVK+G F SM P HY
Sbjct: 508 LPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHY 566
Query: 431 ARLIDLLCRAGKFSEAKKVTESMP--FEPSAPIWESLLAGCRIH-GNIELGIQAAERLFE 487
+ ++D+L RAG+ A ++ +++P + A W ++L+GCR + + + + E
Sbjct: 567 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLE 626
Query: 488 LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDD 546
L P Y++ S+ +A W++VA +R+L++ER V+ G S + N+ FL D
Sbjct: 627 LEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 197 NALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
N++ FY KCG L FD M RD VSWN
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWN---------------------------- 96
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
V++ GL + GF EE L F++++ G EP I AC L +G++IH V
Sbjct: 97 ---VIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYV 151
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
I+ G S N+++ MYA + A +F M D +SW+ +I + Q V +
Sbjct: 152 IRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGL 210
Query: 377 QLYEQMLKE-DILPDRITFLTILSACS 402
+L+++M+ E PD +T ++L AC+
Sbjct: 211 KLFKEMVHEAKTEPDCVTVTSVLKACT 237
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 19/369 (5%)
Query: 298 KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV 357
K CG L + +H ++ LS+ + L+ MY+ CG+ A VF M +
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
+W +I A++G G AI ++ + +E +PD F I AC G V EG +F+SM
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIEL 477
YG+ P + Y L+++ G EA + E MP EP+ +WE+L+ R+HGN+EL
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 478 GIQAAERLFELTPEQDGTYIILSNMYAHLG----KWDEVARVRKLMRERGVKKEPGCSWI 533
G AE + L P + N + G K +V + +KK G
Sbjct: 442 GDYCAEVVEFLDPTR-------LNKQSREGFIPVKASDVEK-------ESLKKRSGI-LH 486
Query: 534 EIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALST 593
+++ + F D PE +++ L L + M ++GY+ +T+ LHD++ E KE L
Sbjct: 487 GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLG 546
Query: 594 HSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXN 653
HSE++A +L V KNLR+C DCHNA K +S N
Sbjct: 547 HSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKN 606
Query: 654 GECSCGNYW 662
G C+C +YW
Sbjct: 607 GACTCKDYW 615
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 199 LITFYTKCGK---LVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVP 251
L+ CG+ L +A+ V K+ DL S + +L Y N EA +F ++
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS 316
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNG-Q 310
E+NL TW ++I A++GFGE+++ +F++ K EG P + G ACG+LG +D G
Sbjct: 317 EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLL 376
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS-WNAMIAALAQH 369
S G S+ +L+ MYA G + A MP +V W ++ H
Sbjct: 377 HFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVH 436
Query: 370 G 370
G
Sbjct: 437 G 437
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 177/363 (48%), Gaps = 16/363 (4%)
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
CG +L + +H + S +SA N++I MY+ CG V A VF +MP + +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
+I A++G+G AI + + +E PD F I AC G + EG +F+SM
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGI 479
YG+ P +HY L+ +L G EA + ESM EP+ +WE+L+ R+HG++ LG
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILG- 367
Query: 480 QAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMV 539
+R ++ + D + + N + G + L++E+ + G ++ +
Sbjct: 368 ---DRCQDMVEQLDASRL---NKESKAGLVP--VKSSDLVKEKLQRMAKGPNY-----GI 414
Query: 540 HVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLA 599
D PE +Y L+ L M ++GY+P +K LHD++ E K+ L H+E+ A
Sbjct: 415 RYMAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFA 474
Query: 600 VVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCG 659
+ L P + IRV KNLR+C DCHNA K +SK +G CSC
Sbjct: 475 FISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCR 534
Query: 660 NYW 662
YW
Sbjct: 535 EYW 537
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQ 280
+ D+ ++N+I+ Y +E+A +F +PERNL TW +I A++G GE+++ F++
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNG 309
K EG +P + ACGVLG ++ G
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 231/529 (43%), Gaps = 74/529 (13%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 62
R G + SF VL +S + + + +QLHC K G+ C SV+N+L+S Y C ++
Sbjct: 208 RMGASLTESSFLGVLKGVSCVKDLDIS-KQLHCSATKKGLDCEISVVNSLISAYGKCGNT 266
Query: 63 TLVE--------------SPVLMASAR--------KLFDEAPLSQKDEPSWTT------- 93
+ E + ++ A+A+ KLF P P+ T
Sbjct: 267 HMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP-EHGFSPNQGTYVSVLGV 325
Query: 94 -------------------------------MIAGYVRNDDLASARKLLDGMTHPIAVAW 122
+I Y + +L +R D + V W
Sbjct: 326 SSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCW 385
Query: 123 NAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLR 182
NA++SGY F +M MG + EYT+++ + + T L +QLH+ ++R
Sbjct: 386 NALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVR 440
Query: 183 TVVQPSEHFILSVNNALITFYTKCGKLVQAREVFD-KMPVRDLVSWNAILSGYINARRLE 241
+ +++ + ++L+ Y K + A + D +V N + Y +
Sbjct: 441 MGYEDNDYVL----SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
E+ + + + + ++W + I+ + S + EE ++LF M + P Y + + C
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLS-AGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
L L G IH + + + + N LI MY KCG + VF + ++W
Sbjct: 557 KLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWT 616
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
A+I+ L HG G +A++ +++ L PDR++F++IL+AC H G+VKEG F M
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KD 675
Query: 421 YGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGC 469
YG+ P DHY +DLL R G EA+ + MPF AP+W + L GC
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 171/378 (45%), Gaps = 40/378 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I+ Y + +++ A K+ D M V++N +I GY ++G ++A+ F +M G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 152 MDEYTYTSLIS-ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
++ T + L+S AS + G QLH L+ + ++ F V L+ Y + L
Sbjct: 113 PNQSTVSGLLSCASLDV---RAGTQLHGLSLKYGLFMADAF---VGTCLLCLYGRLDLLE 166
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A +VF+ MP + L +WN ++S + L+E F FRE+ M + L ES F
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVR--------MGASLTESSF 218
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
G +K + LD +Q+H + G D +S N+
Sbjct: 219 -----------------------LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNS 255
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
LI+ Y KCG A+ +F D VSWNA+I A A+ ++A++L+ M + P+
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
+ T++++L S L+ G+ M G G LID + G +++
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQ-IHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 451 ESMPFEPSAPIWESLLAG 468
+ + + + W +LL+G
Sbjct: 375 DYIR-DKNIVCWNALLSG 391
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 52/365 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M + GF P ++FST L + + QQLH +V+ G VL++L+ Y
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVT-----ELQQLHSVIVRMGYEDNDYVLSSLMRSY---- 457
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAG-YVRNDDLASARKLLDGMTHPIA 119
LM A L D A P ++AG Y R + KL+ + P
Sbjct: 458 -----AKNQLMNDALLLLDWASGPTSVVP--LNIVAGIYSRRGQYHESVKLISTLEQPDT 510
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
V+WN I+ R +EE + F+ M I+ D+YT+ S++S G +H
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGL 570
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
+ +T ++ F V N LI Y KCG + +VF++ ++L++
Sbjct: 571 ITKTDFSCADTF---VCNVLIDMYGKCGSIRSVMKVFEETREKNLIT------------- 614
Query: 240 LEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
WT +IS L G+G+E+L+ F + S G +P ++ + A
Sbjct: 615 ------------------WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY-VDSVS 358
C G + G + ++ G + + + + A+ G + A+ + MP+ D+
Sbjct: 657 CRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPV 716
Query: 359 WNAMI 363
W +
Sbjct: 717 WRTFL 721
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 208/437 (47%), Gaps = 36/437 (8%)
Query: 103 DLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS 162
DL+ + + + + ++WN+++S +G ++ D F KM G + + S ++
Sbjct: 264 DLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLN 323
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
G+Q+H YVL+ S L V +ALI Y KC
Sbjct: 324 FCSRNSDIQSGKQIHCYVLKMGFDVSS---LHVQSALIDMYGKCNG-------------- 366
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
+E + +++ +P NL +++ L G ++ +++F M
Sbjct: 367 -----------------IENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMI 409
Query: 283 SEGLEPCDYAYAGAIKACGVL--GSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
EG + + +KA + SL + +H I+ G+ + ++ +LI Y K G
Sbjct: 410 DEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQ 469
Query: 341 VGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ VF + + ++I A++G G +++ +M + +++PD +T L++LS
Sbjct: 470 NEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSG 529
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
CSH+GLV+EG+ FDS+ + YG++PG YA ++DLL RAG +A+++ +
Sbjct: 530 CSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCV 589
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMR 520
W SLL CRIH N +G +AAE L L PE YI +S Y +G ++ ++R++
Sbjct: 590 AWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAA 649
Query: 521 ERGVKKEPGCSWIEIEN 537
R + +E G S + ++N
Sbjct: 650 SRELMREIGYSSVVVKN 666
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 200/475 (42%), Gaps = 98/475 (20%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQ---QLHCDVVKWGVMCVPSVLNTLLSCYICCAS 61
G +F +VL + +E C+ Q+HC V+ G C V + L+ Y C
Sbjct: 107 GLRESASTFPSVLS----VCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR- 161
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA 121
L+ A KLFDE +LD +AV
Sbjct: 162 --------LVDVALKLFDE-----------------------------MLD---RNLAVC 181
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
N ++ + + G + F+ + +M G+ + TY +I + L G+QLH+ V+
Sbjct: 182 -NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLE 241
++ S F V N L+ +Y+ CG L SG + +
Sbjct: 241 KSGWNISNIF---VANVLVDYYSACGDL----------------------SGSMRS---- 271
Query: 242 EAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
F VPE+++++W ++S A+ G +SL LF++M+ G P + + C
Sbjct: 272 -----FNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS 326
Query: 302 VLGSLDNGQQIHSQVIQLGHD-SSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWN 360
+ +G+QIH V+++G D SSL +ALI MY KC + + +++ ++P ++ N
Sbjct: 327 RNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCN 386
Query: 361 AMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTH 420
+++ +L G I+++ M+ E D +T T+L A S + + E H CT
Sbjct: 387 SLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS--LPESLHS----CTL 440
Query: 421 YGMTPGEDHYA-------RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAG 468
+ YA LID ++G+ ++KV + + P+ S++ G
Sbjct: 441 VHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD-TPNIFCLTSIING 494
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 38/316 (12%)
Query: 99 VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYT 158
+++ +L SA + D M+ V +N +ISG R+G A + + +M S G++ T+
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 159 SLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ-AREVFD 217
S++S + G Q+H V+ + + V +AL+ Y C +LV A ++FD
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCN----MFVRSALVGLYA-CLRLVDVALKLFD 171
Query: 218 KMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKL 277
+M +RNL +++ ++G + ++
Sbjct: 172 EM-------------------------------LDRNLAVCNLLLRCFCQTGESKRLFEV 200
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD-SSLSAGNALITMYA 336
+ +M+ EG+ Y I+ C + G+Q+HS V++ G + S++ N L+ Y+
Sbjct: 201 YLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYS 260
Query: 337 KCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
CG + + F +P D +SWN++++ A +G + ++ L+ +M P F++
Sbjct: 261 ACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMS 320
Query: 397 ILSACSHAGLVKEGQH 412
L+ CS ++ G+
Sbjct: 321 FLNFCSRNSDIQSGKQ 336
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 36/291 (12%)
Query: 186 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 245
PS+ ++ +N I K G L+ A E FD+M VRD+V
Sbjct: 41 NPSD--LVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVV-------------------- 78
Query: 246 IFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGS 305
T+ ++ISG + G +++L+ +M S GL + + C
Sbjct: 79 -----------TYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELF 127
Query: 306 LDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAA 365
G Q+H +VI LG ++ +AL+ +YA +V A +F M + N ++
Sbjct: 128 CREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRC 187
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
Q G + ++Y +M E + + +T+ ++ CSH LV EG+ S+ G
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ-LHSLVVKSGWNI 246
Query: 426 GEDHYAR-LIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNI 475
A L+D G S + + ++P E W S+++ C +G++
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYGSV 296
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 188/396 (47%), Gaps = 20/396 (5%)
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
G E++++ + ++++G G K CG +L+ + +H +I L + A
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
NA+I MY+ C V A VF MP +S + M+ +G G +AI L+ + +E
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
P+ F + S C+ G VKEG F +M YG+ P +HY + +L +G EA
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
E MP EPS +WE+L+ R+HG++ELG +R EL + D T +
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELG----DRCAELVEKLDAT------------R 321
Query: 509 WDEVARVRKLMRERG--VKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEM 566
D+V+ + + VKKEP S F D+ HP+++ +Y+ L L ++
Sbjct: 322 LDKVSSAGLVATKASDFVKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 567 RKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCH 626
+++GY+PDT++ + + + + + E++AVV +LK + I + N+R+ GDCH
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCH 439
Query: 627 NAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
+ K +S NG C C N W
Sbjct: 440 DMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
D+ + NAI+ Y +++A +F E+PE N T VM+ +G+GEE++ LF + K
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQ-QIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
EG +P + C + G + G Q + + G S+ +++ M A G +
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 342 GYADMVFLTMPYVDSVS-WNAMIAALAQHGR---GVQAIQLYEQM 382
A MP SV W ++ HG G + +L E++
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL 317
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 183/381 (48%), Gaps = 43/381 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+I+ VR DL ARK+ D M V W AMI GY+++GL +EAF F GI+
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 152 M-DEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+E + L++ F GRQ+H +++ V L V ++L+ FY +CG+L
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-----LIVESSLVYFYAQCGELT 235
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
A FD M +D++S WT +IS + G
Sbjct: 236 SALRAFDMMEEKDVIS-------------------------------WTAVISACSRKGH 264
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
G +++ +F M + P ++ +KAC +L G+Q+HS V++ + + G +
Sbjct: 265 GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTS 324
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+ MYAKCG + VF M ++V+W ++IAA A+ G G +AI L+ M + ++ +
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY--ARLIDLLCRAGKFSEAKK 448
+T ++IL AC G + G+ + + + ++ Y + L+ L C+ G+ +A
Sbjct: 385 NLTVVSILRACGSVGALLLGKELHAQIIKN---SIEKNVYIGSTLVWLYCKCGESRDAFN 441
Query: 449 VTESMPFEPSAPIWESLLAGC 469
V + +P W ++++GC
Sbjct: 442 VLQQLPSRDVVS-WTAMISGC 461
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 159/310 (51%), Gaps = 35/310 (11%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
T+++ Y + +++ RK+ DGM++ V W ++I+ + R G EEA FR M +
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+ T S++ A + G G++LHA +++ ++ + + + + L+ Y KCG +
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVY----IGSTLVWLYCKCG---E 435
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
+R+ F+ + +++P R++++WT MISG + G
Sbjct: 436 SRDAFN----------------------------VLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
E+L +M EG+EP + Y+ A+KAC SL G+ IHS + S++ G+AL
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
I MYAKCG V A VF +MP + VSW AMI A++G +A++L +M E D
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 392 ITFLTILSAC 401
F TILS C
Sbjct: 588 YIFATILSTC 597
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 37/377 (9%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
++++ Y + +L SA + D M ++W A+IS R G +A F M +
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQ 211
+E+T S++ A GRQ+H+ V++ +++ + V +L+ Y KCG++
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD----VFVGTSLMDMYAKCGEISD 337
Query: 212 AREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFG 271
R+VFD M RN +TWT +I+ A GFG
Sbjct: 338 CRKVFDGMS-------------------------------NRNTVTWTSIIAAHAREGFG 366
Query: 272 EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
EE++ LF MK L + ++ACG +G+L G+++H+Q+I+ + ++ G+ L
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426
Query: 332 ITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
+ +Y KCG A V +P D VSW AMI+ + G +A+ ++M++E + P+
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 486
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTE 451
T+ + L AC+++ + G+ ++ ++ A LI + + G SEA +V +
Sbjct: 487 FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFD 545
Query: 452 SMPFEPSAPIWESLLAG 468
SMP E + W++++ G
Sbjct: 546 SMP-EKNLVSWKAMIMG 561
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 39/212 (18%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQ 151
+T++ Y + + A +L + V+W AMISG G EA D ++M G++
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 152 MDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFI--LSVNNALITFYTKCGKL 209
+ +TY+S + A N+ GR +H+ + H + + V +ALI Y KCG +
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHS------IAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 210 VQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESG 269
+A VFD MP E+NL++W MI G A +G
Sbjct: 538 SEAFRVFDSMP-------------------------------EKNLVSWKAMIMGYARNG 566
Query: 270 FGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
F E+LKL +M++EG E DY +A + CG
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 310 QQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQH 369
++IH+ ++ D + GN LI+ + G + YA VF +MP ++V+W AMI ++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 370 GRGVQAIQLYEQMLKEDI-LPDRITFLTILSACSHAGLVKEGQHYFDSMC-THYGMTPGE 427
G +A L+E +K I + F+ +L+ CS + G+ +M G E
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE 221
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
+ L+ + G+ + A + + M E W ++++ C G+ GI+A
Sbjct: 222 ---SSLVYFYAQCGELTSALRAFDMME-EKDVISWTAVISACSRKGH---GIKA 268
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 172/371 (46%), Gaps = 21/371 (5%)
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
G K CG + +L+ + +H + L S + +I MY+ C A VF MP
Sbjct: 117 GLAKLCGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKR 172
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+S +W MI LA++G G +AI ++ + ++E PD+ F + AC G + EG +F
Sbjct: 173 NSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHF 232
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGN 474
+SM YGM + Y +I++L G EA E M EPS +WE+L+ C + G
Sbjct: 233 ESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY 292
Query: 475 IELGIQAAERLFELTPEQDGTYIIL---SNMYAHLGKWDEVARVRKLMRERGVKKEPGCS 531
+ELG +R EL + D + + + + A + ++++L + ++ +P
Sbjct: 293 LELG----DRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDP--- 345
Query: 532 WIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHAL 591
+ +H F D H + ++ L+ ++M +G++P T+ +E E KE L
Sbjct: 346 ----KKRMHEFRAGDTSHLGTVSAFRSLK---VQMLDIGFVPATRVCFVTVEEEEKEEQL 398
Query: 592 STHSEKLAVVYGILKLPLGATIRVFKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXX 651
S KLA + I+ + V +N+R C D HN FK IS
Sbjct: 399 LFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFY 458
Query: 652 XNGECSCGNYW 662
NG CSC +YW
Sbjct: 459 KNGVCSCKDYW 469
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 206 CGK---LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMI 262
CG+ L +AR V D + D S++ ++ Y R ++A +F E+P+RN TW MI
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMI 181
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNG-QQIHSQVIQLGH 321
LA++G GE ++ +F + EG +P + AC +G ++ G S G
Sbjct: 182 RCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGM 241
Query: 322 DSSLSAGNALITMYAKCG 339
S+ +I M A CG
Sbjct: 242 VLSMEDYVNVIEMLAACG 259
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 35/356 (9%)
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMD 153
+I Y + D+AS R++ G A++W A++SGY +G +++A + M G + D
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 154 EYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
T +++ G+++H Y L+ + P+ +S+ +L+ Y+KCG
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN----VSLVTSLMVMYSKCG------ 467
Query: 214 EVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEE 273
+ P+R +F + +RN+ WT MI E+
Sbjct: 468 --VPEYPIR-----------------------LFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 274 SLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALIT 333
+++F M P + C L +L G+++H +++ +S +I
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIK 562
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
MY KCG + A+ F + S++W A+I A + AI +EQM+ P+ T
Sbjct: 563 MYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFT 622
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
F +LS CS AG V E +F+ M Y + P E+HY+ +I+LL R G+ EA+++
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 35/321 (10%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSM-GI 150
T+++ Y + + AR++ D + V W AMI+G + EA FR M S I
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 151 QMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLV 210
+ T+++ + G+++HA+VL++ + F V++ LI Y KCG +
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF---VHSGLIDLYCKCGDMA 369
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGF 270
R VF +RN ++WT ++SG A +G
Sbjct: 370 SGRRVF-------------------------------YGSKQRNAISWTALMSGYAANGR 398
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
+++L+ M+ EG P A + C L ++ G++IH ++ ++S +
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS 458
Query: 331 LITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
L+ MY+KCGV Y +F + + +W AMI ++ I+++ ML PD
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPD 518
Query: 391 RITFLTILSACSHAGLVKEGQ 411
+T +L+ CS +K G+
Sbjct: 519 SVTMGRVLTVCSDLKALKLGK 539
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 153/359 (42%), Gaps = 39/359 (10%)
Query: 126 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVV 185
I + R E A + GI ++ T+++L+ A G+Q+H ++ +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 186 QPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKF 245
+ +E + L+ YT CG + A++VFD
Sbjct: 143 ESNEF----LRTKLVHMYTACGSVKDAQKVFD---------------------------- 170
Query: 246 IFREVPERNLLTWTVMISGLAESGFG--EESLKLFNQMKSEGLEPCDYAYAGAIKACGVL 303
E N+ +W ++ G SG ++ L F +M+ G++ Y+ + K+
Sbjct: 171 ---ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 304 GSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMI 363
+L G + H+ I+ G +S+ +L+ MY KCG VG A VF + D V W AMI
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 364 AALAQHGRGVQAIQLYEQMLKED-ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYG 422
A LA + R +A+ L+ M+ E+ I P+ + TIL +K G+ +
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 423 MTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQA 481
++ LIDL C+ G + ++V + +A W +L++G +G + +++
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFDQALRS 405
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 205/439 (46%), Gaps = 33/439 (7%)
Query: 34 HCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTT 93
H + WG+ S N L+ +C A + +LM + P DE ++TT
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKA-LCRAHQ--LRPAILMLEDMPSYGLVP----DEKTFTT 229
Query: 94 MIAGYVRNDDLASARKLLDGMTHPIAVAW-----NAMISGYVRHGLYEEAFDTFRKMHSM 148
++ GY+ DL A ++ + M +W N ++ G+ + G E+A + ++M +
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVE-FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 149 -GIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYTKC 206
G D+YT+ +L++ GL G HA ++ ++Q + N++I+ K
Sbjct: 289 DGFFPDQYTFNTLVN-----GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 207 GKLVQAREVFDKMPVRD----LVSWNAILSGYINARRLEEAKFIFREVPERNLL----TW 258
G++ +A EV D+M RD V++N ++S ++EEA + R + + +L T+
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 259 TVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ 318
+I GL + +++LF +M+S+G EP ++ Y I + G LD + Q+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 319 LGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGVQ 374
G S+ N LI + K A+ +F M +SV++N +I L + R
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 375 AIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLI 434
A QL +QM+ E PD+ T+ ++L+ G +K+ +M T G P Y LI
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYGTLI 582
Query: 435 DLLCRAGKFSEAKKVTESM 453
LC+AG+ A K+ S+
Sbjct: 583 SGLCKAGRVEVASKLLRSI 601
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 10/279 (3%)
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
T+ V+I L + ++ + M S GL P + + ++ G LD +I Q+
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP-----YVDSVSWNAMIAALAQHGR 371
++ G S + N ++ + K G V A M + D ++N ++ L + G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
AI++ + ML+E PD T+ +++S G VKE D M T +P Y
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYN 369
Query: 432 RLIDLLCRAGKFSEAK---KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
LI LC+ + EA +V S P + SL+ G + N + ++ E +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 489 TPEQDG-TYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
E D TY +L + GK DE + K M G +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 178/430 (41%), Gaps = 24/430 (5%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P +N +I R A M S G+ DE T+T+++ G + ++
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRD-----LVSWNAIL 231
++ S +SVN ++ + K G++ A +M +D ++N ++
Sbjct: 247 REQMVEFGCSWSN---VSVN-VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 232 SGYINARRLEEA----KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
+G A ++ A + +E + ++ T+ +ISGL + G +E++++ +QM +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P Y I ++ ++ + G + N+LI A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 348 FLTMPYV----DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
F M D ++N +I +L G+ +A+ + +QM IT+ T++
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP--- 460
A +E + FD M H G++ Y LID LC++ + +A ++ + M E P
Sbjct: 483 ANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 461 IWESLLAG-CRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVRKL 518
+ SLL CR G+I+ + + E D TY L + G+ + +++ +
Sbjct: 542 TYNSLLTHFCR-GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 519 MRERGVKKEP 528
++ +G+ P
Sbjct: 601 IQMKGINLTP 610
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 150/349 (42%), Gaps = 69/349 (19%)
Query: 3 RDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASS 62
+DGF PD ++F+T++ + A H ++ +++ G N+++S +C
Sbjct: 288 QDGFFPDQYTFNTLVNGLCK-AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG-LCKLGE 345
Query: 63 TLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PI 118
V+ V + D +P + ++ T+I+ + + + A +L +T P
Sbjct: 346 --VKEAVEVLDQMITRDCSP----NTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG----LFNCGR 174
+N++I G + A + F +M S G + DE+TY LI + + G N +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 175 QLH-AYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSWNA 229
Q+ + R+V+ N LI + K K +A E+FD+M V R+ V++N
Sbjct: 460 QMELSGCARSVI---------TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 230 ILSGYINARRLEEAKFIFREV------PER------------------------------ 253
++ G +RR+E+A + ++ P++
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 254 ---NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+++T+ +ISGL ++G E + KL ++ +G+ +AY I+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 205/443 (46%), Gaps = 53/443 (11%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 140
Q D ++ T++ G + D+ A +K+ G V +N +I G ++ ++A +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F +M + GI+ D +TY+SLIS N G ++ +L + ++ + P+ + +ALI
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN----VVTFSALI 335
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
+ K GKLV+A +++D+M R D+ +++++++G+ RL+EAK +F + +
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
N++T++ +I G ++ EE ++LF +M GL Y I DN Q +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
Q++ +G ++ +++N ++ L ++G+
Sbjct: 456 FKQMVSVGVHPNI-------------------------------LTYNILLDGLCKNGKL 484
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+A+ ++E + + + PD T+ ++ AG V++G F ++ G++P Y
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNT 543
Query: 433 LIDLLCRAGKFSEA----KKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
+I CR G EA KK+ E P P++ + +L+ G+ E + + +
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 489 TPEQDGTYIILSNMYAHLGKWDE 511
D + I L H G+ D+
Sbjct: 603 GFAGDASTIGLVTNMLHDGRLDK 625
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 179/414 (43%), Gaps = 30/414 (7%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTF 142
D +++ I + R L+ A +L M P V +++++GY +A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV---VQPSEHFILSVNNAL 199
+M MG + D +T+T+LI F L N + A V + V QP +V N L
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLF---LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 200 ITFYTKCGKLVQAREVFDKMPV----RDLVSWNAILSGYINARRLEEAKFIFREVPER-- 253
K G + A + KM D+V +N I+ G + +++A +F E+ +
Sbjct: 234 ----CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 254 --NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
++ T++ +IS L G ++ +L + M + P ++ I A G L ++
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDS----VSWNAMIAALA 367
++ ++I+ D + ++LI + + A +F M D V+++ +I
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
+ R + ++L+ +M + ++ + +T+ T++ A Q F M + G+ P
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNI 468
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHGNIELG 478
Y L+D LC+ GK ++A V E + EP + ++ G G +E G
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 185/442 (41%), Gaps = 48/442 (10%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P V +N ++S + +E +M ++GI D YTY+ I+ + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 177 HAYVLRTVVQPSEHFILSVNN------------ALI-------------TFYTKC----- 206
A +++ +P + S+ N AL+ TF T
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 207 -GKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLT 257
K +A + D+M R DLV++ +++G ++ A + +++ E +++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
+ +I GL + +++L LF +M ++G+ P + Y+ I G + ++ S +I
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 318 QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAALAQHGRGV 373
+ + ++ +ALI + K G + A+ ++ M D +++++I H R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 374 QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARL 433
+A ++E M+ +D P+ +T+ T++ A V+EG F M + G+ Y L
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTL 439
Query: 434 IDLLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTP 490
I +A A+ V + M P+ + LL G +G + + E L T
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 491 EQD-GTYIILSNMYAHLGKWDE 511
E D TY I+ GK ++
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVED 521
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 193/386 (50%), Gaps = 29/386 (7%)
Query: 49 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 108
N +++C+ CC +L S ++ KL E D + +++ G+ R + ++ A
Sbjct: 123 FNIVINCFCCCFQVSLALS--ILGKMLKLGYEP-----DRVTIGSLVNGFCRRNRVSDAV 175
Query: 109 KLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 164
L+D M P VA+NA+I + +AFD F+++ GI+ + TYT+L++
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-- 222
N+ ++ +L + +++ + P+ + +AL+ + K GK+++A+E+F++M VR
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPN----VITYSALLDAFVKNGKVLEAKELFEEM-VRMS 290
Query: 223 ---DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESL 275
D+V+++++++G R++EA +F + + +++++ +I+G ++ E+ +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 276 KLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMY 335
KLF +M GL Y I+ G +D Q+ SQ+ G + N L+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 336 AKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
G + A ++F M +D V++ +I + + G+ +A L+ + + + PD
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSM 417
+T+ T++S GL+ E + + M
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 167/367 (45%), Gaps = 21/367 (5%)
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 160
ND + ++ P V +N ++S V+ Y+ +KM +GI+ D YT+ +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 161 ISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM- 219
I+ + + +L+ +P I +L+ + + ++ A + DKM
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTI----GSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 220 -----PVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGF 270
P D+V++NAI+ +R+ +A F+E+ + N++T+T +++GL S
Sbjct: 183 EIGYKP--DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
++ +L + M + + P Y+ + A G + +++ +++++ D + ++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 331 LITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
LI + A+ +F M D VS+N +I + R ++L+ +M +
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
++ + +T+ T++ AG V + Q +F M +G++P Y L+ LC G+ +A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 447 KKVTESM 453
+ E M
Sbjct: 420 LVIFEDM 426
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 131/273 (47%), Gaps = 23/273 (8%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+++ ++ +V+N + A++L + M P V ++++I+G H +EA F M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQL-HAYVLRTVVQPSEHFILSVNNALITFYT 204
S G D +Y +LI+ G +L R +V + + N LI +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY-----NTLIQGFF 376
Query: 205 KCGKLVQAREVFDKMPV----RDLVSWNAILSGYINARRLEEAKFIFREVPER----NLL 256
+ G + +A+E F +M D+ ++N +L G + LE+A IF ++ +R +++
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
T+T +I G+ ++G EE+ LF + +GL+P Y + G L + +++++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 317 IQLG---HDSSLSAGNALIT--MYAKCGVVGYA 344
Q G +D +LS G+ ++ + K GYA
Sbjct: 497 KQEGLMKNDCTLSDGDITLSAELIKKMLSCGYA 529
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 180/397 (45%), Gaps = 54/397 (13%)
Query: 88 EPSWTTM---IAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFD 140
PS T+ + G+ + + A L+D M P V +N +I+G ++ A +
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F M GI+ D TY +LIS N+G + +L +++ + P+ F ALI
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF----TALI 261
Query: 201 TFYTKCGKLVQAREVFDKMPVRDLV----SWNAILSGYINARRLEEAKFIFREVPER--- 253
+ K G L++AR ++ +M R +V ++N++++G+ L +AK++F + +
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
+++T+ +I+G +S E+ +KLF +M +GL + Y I G L+ Q++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
++++ CGV D V++N ++ L +G+
Sbjct: 382 FNRMVD-------------------CGVSP------------DIVTYNILLDCLCNNGKI 410
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+A+ + E + K ++ D IT+ I+ +KE F S+ T G+ P Y
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL-TRKGVKPDAIAYIT 469
Query: 433 LIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLL 466
+I LCR G EA K+ M F PS I++ L
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 159/349 (45%), Gaps = 17/349 (4%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P V + +++ + ++ + KM ++GI D Y++T LI + L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP----VRDLVSWNAILS 232
+++ +PS I+++ +L+ + + + +A + D M V ++V +N +++
Sbjct: 137 LGKMMKLGFRPS---IVTL-GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVIN 192
Query: 233 GYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
G R L A +F + ++ + +T+ +ISGL+ SG ++ +L M ++P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
+ I G+L + ++ ++I+ ++ N+LI + G +G A +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 349 LTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHA 404
M + D V++N +I + R ++L+ +M + ++ D T+ T++ A
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 405 GLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
G + Q F+ M G++P Y L+D LC GK +A + E +
Sbjct: 373 GKLNVAQKVFNRM-VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/543 (21%), Positives = 230/543 (42%), Gaps = 63/543 (11%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M R GF P + + VL + + ++ +++ G+M NT+L
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLR-DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP--- 117
V+ L R + + E ++ +I G+ +N + AR+ M
Sbjct: 253 DLERVDKIWLEMKRRNI-------EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFA 305
Query: 118 -IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
++N +I GY + GL+++A+ +M + GI TY I A + G + R+L
Sbjct: 306 VTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL 365
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL----VSWNAILS 232
L ++ P ++S N L+ Y K GK V+A +FD + D+ V++N ++
Sbjct: 366 ----LSSMAAPD---VVSYN-TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 233 GYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
G + LE A+ + E+ + +++T+T ++ G ++G + +++++M +G++P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
YAY LG D ++H +++ H +
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP------------------------ 513
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
D +N I L + G V+AI+ ++ + ++PD +T+ T++ G K
Sbjct: 514 ------DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESL 465
++ +D M + P Y LI +AG+ +A + + M P+ +L
Sbjct: 568 MARNLYDEMLRK-RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 466 LAGCRIHGNIELGIQAAERLFEL-TPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
L G GNI+ + ++ E P +Y +L + KW+EV ++ K M ++ +
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Query: 525 KKE 527
+ +
Sbjct: 687 EPD 689
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 23/245 (9%)
Query: 71 MASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH-----PIAVAWN 123
++ A +++DE + D ++TT G +R D A +L + M P +N
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
I G + G +A + RK+ +G+ D TYT++I G F R L+ +LR
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 184 VVQPS--EHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINA 237
+ PS +F+L +A K G+L QA + +M R ++++ NA+L G A
Sbjct: 580 RLYPSVITYFVLIYGHA------KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 238 RRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
++EA ++ E N ++T++IS + EE +KL+ +M + +EP Y +
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 294 AGAIK 298
K
Sbjct: 694 RALFK 698
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 170/386 (44%), Gaps = 57/386 (14%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLD----GMTHPIAVAWNAMISGYVRHGLYEEAFD 140
Q D ++ +I G + + A LL+ G V +N +I G ++ ++AFD
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F KM + GI+ D +TY LIS N G ++ +L + +L + P F NALI
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF----NALI 327
Query: 201 TFYTKCGKLVQAREVFDKMP-----VRDLVSWNAILSGYINARRLEEAKFIFREVPER-- 253
+ K GKLV+A +++D+M D+V++N ++ G+ +R+EE +FRE+ +R
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 254 --NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
N +T+T +I G ++ + + +F QM S+G+ P Y
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY------------------ 429
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALA 367
N L+ G V A +VF M +D V++ MI AL
Sbjct: 430 -----------------NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 368 QHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
+ G+ L+ + + + P+ +T+ T++S GL +E F M G P
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNS 531
Query: 428 DHYARLIDLLCRAGKFSEAKKVTESM 453
Y LI R G + + ++ + M
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEM 557
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 197/481 (40%), Gaps = 68/481 (14%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+++ I + R L+ A +L M P V N++++G+ EA +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILS----------- 194
MG Q D T+T+L+ F N + A V R VV+ + +++
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 195 -----------------------VNNALITFYTKCGKLVQAREVFDKMPVR----DLVSW 227
+ N +I K + A ++F+KM + D+ ++
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 228 NAILSGYINARRLEEAKFIFREVPERN----LLTWTVMISGLAESGFGEESLKLFNQM-K 282
N ++S N R +A + ++ E+N L+ + +I + G E+ KL+++M K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG 342
S+ P AY IK ++ G ++ ++ Q G + LI + +
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 343 YADMVFLTM----PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTIL 398
A MVF M + D +++N ++ L +G A+ ++E M K D+ D +T+ T++
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 399 SACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPS 458
A AG V++G F S+ G+ P Y ++ CR G EA + M +
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KED 525
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLFELTPE--------QDGTYIILSNMYAHLGKWD 510
P+ S I + G +AA EL E T+ +++NM H G+ D
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASA--ELIKEMRSCGFAGDASTFGLVTNML-HDGRLD 582
Query: 511 E 511
+
Sbjct: 583 K 583
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 162/384 (42%), Gaps = 51/384 (13%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P V ++ ++S + ++ +M ++GI + YTY+ I+ + +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 177 HAYVLRTVVQPSEHFILSVNNAL----------------------------ITFYTKCGK 208
+++ PS I+++N+ L +TF T
Sbjct: 133 LGKMMKLGYGPS---IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 209 LVQ------AREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVP----ERN 254
L Q A + ++M V+ DLV++ A+++G + A + ++ E +
Sbjct: 190 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 249
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHS 314
++ + +I GL + +++ LFN+M+++G++P + Y I G + ++ S
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 315 QVIQLGHDSSLSAGNALITMYAKCGVVG-----YADMVFLTMPYVDSVSWNAMIAALAQH 369
+++ + L NALI + K G + Y +MV + D V++N +I ++
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDH 429
R + ++++ +M + ++ + +T+ T++ A Q F M + G+ P
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMT 428
Query: 430 YARLIDLLCRAGKFSEAKKVTESM 453
Y L+D LC G A V E M
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYM 452
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 180/403 (44%), Gaps = 54/403 (13%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ T+I GY + + KLL M P +++N +I+G R G +E +M
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
+ G +DE TY +LI G F+ +HA +LR + PS + +LI K
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS----VITYTSLIHSMCK 357
Query: 206 CGKLVQAREVFDKMPVRDLV----SWNAILSGYINARRLEEAKFIFREVPER----NLLT 257
G + +A E D+M VR L ++ ++ G+ + EA + RE+ + +++T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
+ +I+G +G E+++ + MK +GL P +Y+ + +D ++ +++
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 318 QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQ 377
+ G P D+++++++I + R +A
Sbjct: 478 EKG-----------------------------IKP--DTITYSSLIQGFCEQRRTKEACD 506
Query: 378 LYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLL 437
LYE+ML+ + PD T+ +++A G +++ + M G+ P Y+ LI+ L
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVLPDVVTYSVLINGL 565
Query: 438 CRAGKFSEAKKVTESMPFEPSAP---IWESLLAGCRIHGNIEL 477
+ + EAK++ + +E S P + +L+ C NIE
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEF 605
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 154/318 (48%), Gaps = 16/318 (5%)
Query: 224 LVSWNAILSGYINARR-LEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLF 278
++S+NA+L I ++R + A+ +F+E+ E N+ T+ ++I G +G + +L LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKC 338
++M+++G P Y I L +D+G ++ + G + +L + N +I +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 339 GVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
G + V M +D V++N +I + G QA+ ++ +ML+ + P IT+
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
+++ + AG + + D M G+ P E Y L+D + G +EA +V M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 455 ---FEPSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTPEQDGTYIILSNMYAHLGKW 509
F PS + +L+ G + G +E I E + E L+P+ +LS +
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG-FCRSYDV 466
Query: 510 DEVARVRKLMRERGVKKE 527
DE RV++ M E+G+K +
Sbjct: 467 DEALRVKREMVEKGIKPD 484
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 165/393 (41%), Gaps = 78/393 (19%)
Query: 87 DEPSWTTMIAGYVRNDD-----LASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDT 141
DE ++ T+I GY + + + A L G+T P + + ++I + G A +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 142 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALI 200
+M G+ +E TYT+L+ G N AY VLR + + NALI
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMN-----EAYRVLREMNDNGFSPSVVTYNALI 422
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNL- 255
+ GK+ A V + M + D+VS++ +LSG+ + ++EA + RE+ E+ +
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 256 ---LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
+T++ +I G E +E+ L+ +M GL P ++ Y I A + G L+ Q+
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 313 HSQVIQLG--------------------------------HDSSLSAGNALITMYAKC-- 338
H+++++ G ++ S+ + T+ C
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 339 ----------------GVVGYADMVFLTM------PYVDSVSWNAMIAALAQHGRGVQAI 376
G++ AD VF +M P D ++N MI + G +A
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKP--DGTAYNIMIHGHCRAGDIRKAY 660
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKE 409
LY++M+K L +T + ++ A G V E
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 180/429 (41%), Gaps = 24/429 (5%)
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL-FNC 172
+ + + ++ ++ Y R L ++A + G +Y +++ A+ + +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWN 228
+ +L + V P+ + N LI + G + A +FDKM + ++V++N
Sbjct: 189 AENVFKEMLESQVSPN----VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 229 AILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMKSE 284
++ GY R++++ + R + E NL+++ V+I+GL G +E + +M
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 285 GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYA 344
G + Y IK G+ +H+++++ G S+ +LI K G + A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 345 DMVFLTMPYVDSV-----SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
M FL V + ++ ++ +Q G +A ++ +M P +T+ +++
Sbjct: 365 -MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 400 ACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM---PFE 456
G +++ + M G++P Y+ ++ CR+ EA +V M +
Sbjct: 424 GHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 457 PSAPIWESLLAG-CRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARV 515
P + SL+ G C E E L P + TY L N Y G ++ ++
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 516 RKLMRERGV 524
M E+GV
Sbjct: 543 HNEMVEKGV 551
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 189/438 (43%), Gaps = 36/438 (8%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ I+GY+ + ASA K + M P V +I+ Y + G EA +R M
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
GI D TYT L++ F + ++ + + P + F V LI ++K
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP-DVFSYGV---LINGFSK 639
Query: 206 CGKLVQAREVFDKMP----VRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLT 257
G + +A +FD+M +++ +N +L G+ + +E+AK + E+ + N +T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
+ +I G +SG E+ +LF++MK +GL P + Y + C L ++ I
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TN 758
Query: 318 QLGHDSSLSAGNALITMYAKCGVVGYA--------DMVFLTMPYVDSVSWNAMIAALAQH 369
+ G SS + NALI K G D F + V++N MI L +
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 370 GRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDH 429
G A +L+ QM +++P IT+ ++L+ G E FD G+ P
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIM 877
Query: 430 YARLIDLLCRAGKFSEAKKVTESMPFEPSA---------PIWESLLAGCRIHGNIELGIQ 480
Y+ +I+ + G ++A + + M F +A +LL+G G +E+ +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 481 AAERLFELTPEQDGTYII 498
E + L D +I
Sbjct: 937 VMENMVRLQYIPDSATVI 954
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 180/435 (41%), Gaps = 60/435 (13%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ T++ G + DL A ++ M P V + +I ++++ + +A ++M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
GI D + Y SLI + R ++ ++P+ A I+ Y +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF----TYGAFISGYIE 534
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYIN----ARRLEEAKFIFREVPERNLL----T 257
+ A + +M ++ + +G IN ++ EA +R + ++ +L T
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
+TV+++GL ++ +++ ++F +M+ +G+ P ++Y I LG++ I +++
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 318 QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGV 373
+ G ++ N L+ + + G + A + M + ++V++ +I + G
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 374 QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM---CT----------- 419
+A +L+++M + ++PD + T++ C V+ F + C
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 420 ---HYGMT--------------------PGEDHYARLIDLLCRAGKFSEAKKVTESMP-- 454
+G T P + Y +ID LC+ G AK++ M
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 455 -FEPSAPIWESLLAG 468
P+ + SLL G
Sbjct: 835 NLMPTVITYTSLLNG 849
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 187/466 (40%), Gaps = 70/466 (15%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P+ ++ +I G + E+A +M S+G+ +D +TY+ LI GL GR
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID-----GLLK-GRNA 328
Query: 177 HAY--VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV----SWNAI 230
A ++ +V + + + I +K G + +A+ +FD M L+ ++ ++
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388
Query: 231 LSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESG----------------- 269
+ GY + + + + E+ +RN++ T+ ++ G+ SG
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 270 -------------------FGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
FG +++++ +MK +G+ P + Y I +D +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFG-DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAAL 366
++++ G + A I+ Y + AD M + V +I
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPG 426
+ G+ ++A Y M+ + IL D T+ +++ V + + F M G+ P
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPD 626
Query: 427 EDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAG-CRIHGNIELGIQAA 482
Y LI+ + G +A + + M E P+ I+ LL G CR G IE +A
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR-SGEIE---KAK 682
Query: 483 ERLFELTPE----QDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
E L E++ + TY + + Y G E R+ M+ +G+
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 153/393 (38%), Gaps = 81/393 (20%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ G APD FS+ ++ S +
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGN----------------------------------- 642
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEPS---WTTMIAGYVRNDDLASARKLLDGMT-- 115
M A +FDE + + P+ + ++ G+ R+ ++ A++LLD M+
Sbjct: 643 ----------MQKASSIFDEM-VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 116 --HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
HP AV + +I GY + G EAF F +M G+ D + YT+L+ C
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG--------CC 743
Query: 174 RQLHAYVLRTVVQPSEHFILSVN---NALITFYTKCGKLVQAREV--------FDKMPVR 222
R T+ ++ S NALI + K GK EV FD+
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLF 278
+ V++N ++ LE AK +F ++ NL+ T+T +++G + G E +F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVLGSLDNG-----QQIHSQVIQLGHDSSLSAGNALIT 333
++ + G+EP Y+ I A G Q + G S+S AL++
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAAL 366
+AK G + A+ V M + + +A + L
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIEL 956
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%)
Query: 556 YKYLEQLVIEMRKLGYIPDTKFVLHDMESEHKEHALSTHSEKLAVVYGILKLPLGATIRV 615
Y L+ L E+R GY+P+TK+VLHD++ E KE AL HSE+LA+ +GI+ P G TIRV
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 616 FKNLRMCGDCHNAFKFISKXXXXXXXXXXXXXXXXXXNGECSCGNYW 662
KNLR+CGDCHN K +S +G CSCG+YW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 181/387 (46%), Gaps = 25/387 (6%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFD 140
Q D ++ ++ G + D A LL+ M P + +N +I G ++ ++A +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F++M + GI+ + TY+SLIS N G ++ +L + ++ + P + F S ALI
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP-DVFTFS---ALI 333
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
+ K GKLV+A +++D+M R +V+++++++G+ RL+EAK +F + +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
+++T+ +I G + EE +++F +M GL Y I+ G D Q+I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM------PYVDSVSWNAMIAAL 366
+++ G ++ N L+ K G + A +VF + P + ++N MI +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI--YTYNIMIEGM 511
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPG 426
+ G+ L+ + + + PD + + T++S G +E F M G P
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM-KEDGTLPN 570
Query: 427 EDHYARLIDLLCRAGKFSEAKKVTESM 453
Y LI R G + ++ + M
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEM 597
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 181/433 (41%), Gaps = 51/433 (11%)
Query: 101 NDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSL 160
+D +A +++ P + ++ ++S + ++ +M ++GI + YTY+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 161 ISA--------------------SFNTGLFNCGRQLHAY-----VLRTVVQPSEHFILSV 195
I+ + + L+ Y + V + F+
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 196 NNALITFYTKC------GKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKF 245
+TF T K +A + D+M + DLV++ +++G + A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 246 IFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACG 301
+ ++ + L L + +I GL + +++L LF +M+++G+ P Y+ I
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 302 VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM------PYVD 355
G + ++ S +I+ + + +ALI + K G + A+ ++ M P +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI- 361
Query: 356 SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
V+++++I H R +A Q++E M+ + PD +T+ T++ V+EG F
Sbjct: 362 -VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIH 472
M + G+ Y LI L +AG A+++ + M + P+ + +LL G +
Sbjct: 421 EM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 473 GNIELGIQAAERL 485
G +E + E L
Sbjct: 480 GKLEKAMVVFEYL 492
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 149/333 (44%), Gaps = 18/333 (5%)
Query: 239 RLEEAKFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYA 294
+L++A +F E+ P +++ ++ ++S +A+ + + L QM++ G+ Y Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG----VVGYADMVFLT 350
I L + ++++LG++ ++ ++L+ Y V D +F+T
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
++V++N +I L H + +A+ L ++M+ + PD +T+ +++ G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAK---KVTESMPFEPSAPIWESLLA 467
+ + M + PG Y +ID LC+ +A K E+ P+ + SL++
Sbjct: 241 FNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 468 GCRIHGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVRKLMRERGVKK 526
+G + + E D T+ L + + GK E ++ M +R +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-- 357
Query: 527 EPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYL 559
+P S + ++++ F + D + E +++++
Sbjct: 358 DP--SIVTYSSLINGFCMHDRLD-EAKQMFEFM 387
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 120/524 (22%), Positives = 228/524 (43%), Gaps = 66/524 (12%)
Query: 1 MKRDGFAPDPFSFSTVLGAM--------SLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTL 52
M+R+ PD FS++TV+ +L E +V WG+ L
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI---------L 218
Query: 53 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 112
+ + C + + E+ + + + EA L +T++I G+ +L + L D
Sbjct: 219 IDAF--CKAGKMDEAMGFLKEMKFMGLEADL-----VVYTSLIRGFCDCGELDRGKALFD 271
Query: 113 GMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 168
+ P A+ +N +I G+ + G +EA + F M G++ + YTYT LI G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID-----G 326
Query: 169 LFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----D 223
L G+ A +L +++ E N +I K G + A E+ + M R D
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 224 LVSWNAILSGYINARRLEEA-KFIFREVPER-----NLLTWTVMISGLAESGFGEESLKL 277
+++N +L G L+EA K ++ + + +++++ +I GL + ++L +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 278 FNQMKSEGLEPCDYAYAG-----AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
++ + E L D +KA V +++ +QI I D+ A+I
Sbjct: 447 YDLL-VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY----TAMI 501
Query: 333 TMYAKCGVVGYADMVFLTM------PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKED 386
+ K G++ A + M P V +N ++++L + G QA +L+E+M +++
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSV--FDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 387 ILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA 446
PD ++F ++ AG +K + M + G++P Y++LI+ + G EA
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 447 KKVTESM---PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFE 487
+ M FEP A I +S+L C G + + ++L +
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 175/397 (44%), Gaps = 40/397 (10%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
+A A N +++ VR +E AF +RKM ++ T+ + +S S GL C Q+
Sbjct: 70 SLAFAGNNLMAKLVRSRNHELAFSFYRKM------LETDTFINFVSLS---GLLECYVQM 120
Query: 177 HAY-----VLRTVVQPSEHFILSVNNALITFYTK---CGKLVQA-REVFDKMPVRDLVSW 227
VL +++ F + +N L+ + CGK V RE+ + D+ S+
Sbjct: 121 RKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSY 180
Query: 228 NAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKS 283
N ++ G+ + LE+A + E+ +L+TW ++I ++G +E++ +MK
Sbjct: 181 NTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
GLE Y I+ G LD G+ + +V++ G N LI + K G +
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 344 ADMVFLTM------PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTI 397
A +F M P V ++ +I L G+ +A+QL M+++D P+ +T+ I
Sbjct: 301 ASEIFEFMIERGVRPNV--YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 398 LSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK-----VTES 452
++ GLV + + M P Y L+ LC G EA K + +S
Sbjct: 359 INKLCKDGLVADAVEIVELM-KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 453 MPFEPSAPIWESLLAGC----RIHGNIELGIQAAERL 485
+P + +L+ G R+H +++ E+L
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 215/490 (43%), Gaps = 32/490 (6%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
GF P ++ + +LG++ + + E+ +++K + + N L++ + CA +
Sbjct: 193 GFNPSVYTCNAILGSV-VKSGEDVSVWSFLKEMLKRKICPDVATFNILIN--VLCAEGSF 249
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVA--- 121
+S LM K AP ++ T++ Y + +A +LLD M A
Sbjct: 250 EKSSYLMQKMEK-SGYAP----TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVC 304
Query: 122 -WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
+N +I R + + R M I +E TY +LI+ N G QL +
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL----VSWNAILSGYIN 236
L + P+ H NALI + G +A ++F M + L VS+ +L G
Sbjct: 365 LSFGLSPN-HVTF---NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 237 ARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
+ A+ + + + +T+T MI GL ++GF +E++ L N+M +G++P
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
Y+ I +G ++I ++ ++G + + LI + G + A ++ M
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 353 Y----VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
D ++N ++ +L + G+ +A + M + ILP+ ++F +++ ++G
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSA---PIWESL 465
+ FD M T G P Y L+ LC+ G EA+K +S+ P+A ++ +L
Sbjct: 601 KAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 466 LAGCRIHGNI 475
L GN+
Sbjct: 660 LTAMCKSGNL 669
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 111/551 (20%), Positives = 220/551 (39%), Gaps = 83/551 (15%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQ--------QLHCDVVKWGVMCVPSVLNTL 52
M++ G+AP +++TVL W+C+ +L + GV N L
Sbjct: 259 MEKSGYAPTIVTYNTVL---------HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
Query: 53 LSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD 112
+ + C S+ + + +L+ RK + +E ++ T+I G+ + A +LL+
Sbjct: 310 I--HDLCRSNRIAKGYLLLRDMRK-----RMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362
Query: 113 GM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG 168
M P V +NA+I G++ G ++EA F M + G+ E +Y L+
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 169 LFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWN 228
F+ R + + R V +++
Sbjct: 423 EFDLARGFYMRMKRNGVCVGR-----------------------------------ITYT 447
Query: 229 AILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSE 284
++ G L+EA + E+ + +++T++ +I+G + G + + ++ ++
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 285 GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYA 344
GL P Y+ I C +G L +I+ +I GH N L+T K G V A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 345 DMVFLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
+ M ++VS++ +I G G++A ++++M K P T+ ++L
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDH--YARLIDLLCRAGKFSEAKKVTESM---PF 455
G ++E + + S+ + + D Y L+ +C++G ++A + M
Sbjct: 628 LCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 456 EPSAPIWESLLAGCRIHGNIELGI---QAAERLFELTPEQDGTYIILSNMYAHLGKWDEV 512
P + + SL++G G + I + AE + P + + M+ G+W
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA-GQWKAG 743
Query: 513 ARVRKLMRERG 523
R+ M G
Sbjct: 744 IYFREQMDNLG 754
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 175/418 (41%), Gaps = 36/418 (8%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTHPI-----AVAWNAMISGYVRHGLYEEAFDTFRK 144
++ +++ G + L A K L + H + V +N +++ + G +A F +
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSL-HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL------RTVVQPSE-HFILSVNN 197
M I D YTYTSLIS GL G+ + A + R V P++ + V+
Sbjct: 679 MVQRSILPDSYTYTSLIS-----GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDG 733
Query: 198 ALITFYTKCGKLVQAREVFDKMP-VRDLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
K G + RE D + D+V+ NA++ GY ++E+ + E+ +
Sbjct: 734 MFKAGQWKAG--IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
NL T+ +++ G ++ S L+ + G+ P + L+ G +I
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYA-DMVFLTMPY---VDSVSWNAMIAALAQ 368
I G + N LI+ G + +A D+V + +D + +AM++ L +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
+ R ++ + +M K+ I P+ ++ +++ G +K + M H P
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 429 HYARLIDLLCRAGKFSEAK---KVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAE 483
A ++ L + GK EA + M P+ + +L+ C +GN+ I+A E
Sbjct: 972 ESA-MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV---IEALE 1025
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 139/332 (41%), Gaps = 28/332 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTF 142
D + MI GY R + LL M + P +N ++ GY + +F +
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQLHAYVLRTVVQPSEHFILSVNNALIT 201
R + GI D+ T SL+ + + G + L A++ R V F N LI+
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF-----NMLIS 872
Query: 202 FYTKCGKLVQAREVFDKMPVR-------DLVSWNAILSGYINARRLEEAKFIFREVPERN 254
KC + FD + V D + +A++S R +E++ + E+ ++
Sbjct: 873 ---KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 255 L----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQ 310
+ + +I+GL G + + + +M + + P + A + ++A G D
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989
Query: 311 QIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAAL 366
+ ++++ ++++ L+ + K G V A + + M +D VS+N +I L
Sbjct: 990 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Query: 367 AQHGRGVQAIQLYEQMLKEDILPDRITFLTIL 398
G A +LYE+M + L + T+ ++
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 180/410 (43%), Gaps = 28/410 (6%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFD 140
Q D ++ +I G+ + + + A ++LD M P V +N MI G + A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
++ S Q TYT LI A+ G + +L +L ++P + N +I
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD----MFTYNTII 270
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFI----FREVPE 252
K G + +A E+ + ++ D++S+N +L +N + EE + + F E +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 253 RNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
N++T++++I+ L G EE++ L MK +GL P Y+Y I A G LD +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAALAQ 368
+I G + N ++ K G A +F + V +S S+N M +AL
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM--CTHYGMTPG 426
G ++A+ + +M+ I PD IT+ +++S G+V E M C + P
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH---PS 507
Query: 427 EDHYARLIDLLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHG 473
Y ++ C+A + +A V ESM P+ + L+ G G
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 10/268 (3%)
Query: 268 SGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA 327
SG ESL L M +G P IK L ++ ++ + + G + A
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFA 160
Query: 328 GNALITMYAKCGVVGYADMVFLTMPYVD----SVSWNAMIAALAQHGRGVQAIQLYEQML 383
NALI + K + A V M D +V++N MI +L G+ A+++ Q+L
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
++ P IT+ ++ A G V E D M + G+ P Y +I +C+ G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMV 279
Query: 444 SEAKKVTESMPF---EPSAPIWESLLAGCRIHGNIELGIQAAERLF-ELTPEQDGTYIIL 499
A ++ ++ EP + LL G E G + ++F E TY IL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 500 SNMYAHLGKWDEVARVRKLMRERGVKKE 527
GK +E + KLM+E+G+ +
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPD 367
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 183/398 (45%), Gaps = 53/398 (13%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFD 140
Q + ++ ++ G + D A LL+ M V +N +I ++ ++A +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F++M + GI+ + TY+SLIS + G ++ QL + ++ + P+ L NALI
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN----LVTFNALI 337
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
+ K GK V+A +++D M R D+ ++N++++G+ RL++AK +F + +
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
+++T+ +I G +S E+ +LF +M GL Y I+ G DN Q++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
Q++ G +P D ++++ ++ L +G+
Sbjct: 458 FKQMVSDG------------------------------VP-PDIMTYSILLDGLCNNGKL 486
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+A+++++ M K +I D + T++ AG V +G F S+ G+ P Y
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNT 545
Query: 433 LIDLLCRAGKFSEA----KKVTESMPFEPSAPIWESLL 466
+I LC EA KK+ E P P++ + +L+
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLI 582
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 176/411 (42%), Gaps = 30/411 (7%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ +I + R ++ A LL M P V +++++GY +A +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV---VQPSEHFILSVNNALITF 202
MG + D T+T+LI F L N + A V R V QP+ L ++
Sbjct: 182 VEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDRMVQRGCQPN----LVTYGVVVNG 234
Query: 203 YTKCGKLVQAREVFDKMPV----RDLVSWNAILSGYINARRLEEAKFIFREVPER----N 254
K G A + +KM D+V +N I+ R +++A +F+E+ + N
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHS 314
++T++ +IS L G ++ +L + M + + P + I A G ++++
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 315 QVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHG 370
+I+ D + N+L+ + + A +F M + D V++N +I +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
R +L+ +M ++ D +T+ T++ H G Q F M + G+ P Y
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTY 473
Query: 431 ARLIDLLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHGNIELG 478
+ L+D LC GK +A +V + M + I+ +++ G G ++ G
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 179/433 (41%), Gaps = 61/433 (14%)
Query: 104 LASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 159
L A L GM P V +N ++S + ++ KM + I YTY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 219
LI+ + L +++ +PS I+++ ++L+ Y ++ A + D+M
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPS---IVTL-SSLLNGYCHGKRISDAVALVDQM 181
Query: 220 PVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESG-- 269
D +++ ++ G + EA + + +R NL+T+ V+++GL + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 270 ---------------------FG------------EESLKLFNQMKSEGLEPCDYAYAGA 296
F +++L LF +M+++G+ P Y+
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 297 IKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVG-----YADMVFLTM 351
I G + Q+ S +I+ + +L NALI + K G Y DM+ ++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
D ++N+++ H R +A Q++E M+ +D PD +T+ T++ + V++G
Sbjct: 362 D-PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAG 468
F M +H G+ Y LI L G A+KV + M + P + LL G
Sbjct: 421 ELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 469 CRIHGNIELGIQA 481
+G +E ++
Sbjct: 480 LCNNGKLEKALEV 492
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 143/315 (45%), Gaps = 32/315 (10%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLNTLLSCYICC 59
M+ G P+ ++S+++ L + W QL D+++ + N L+ ++
Sbjct: 286 METKGIRPNVVTYSSLISC--LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV-- 341
Query: 60 ASSTLVESPVLMASARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARKLLDGMTH 116
VE A KL+D+ + + +P ++ +++ G+ +D L A+++ + M
Sbjct: 342 KEGKFVE-------AEKLYDDM-IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 117 ----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 172
P V +N +I G+ + E+ + FR+M G+ D TYT+LI F+ G +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWN 228
+++ ++ V P + + L+ GKL +A EVFD M D+ +
Sbjct: 454 AQKVFKQMVSDGVPPD----IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 229 AILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSE 284
++ G A ++++ +F + + N++T+ MISGL +E+ L +MK +
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 285 GLEPCDYAYAGAIKA 299
G P Y I+A
Sbjct: 570 GPLPNSGTYNTLIRA 584
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 160/346 (46%), Gaps = 18/346 (5%)
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL-FNCGRQLHAY 179
++ ++IS + G Y EA + F+KM G + TY +++ G +N L
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYI 235
+ + P + N LIT + +A +VF++M D V++NA+L Y
Sbjct: 270 MKSDGIAPDAY----TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 236 NARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+ R +EA + E+ +++T+ +IS A G +E+++L NQM +G +P +
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG----VVGYADMV 347
Y + G +++ I ++ G ++ NA I MY G ++ D +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 348 FLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
+ D V+WN ++A Q+G + ++++M + +P+R TF T++SA S G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
++ + M G+TP Y ++ L R G + +++KV M
Sbjct: 506 EQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 26/352 (7%)
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFRE 249
SV +I+ K G++ A +F+ + D+ S+ +++S + N+ R EA +F++
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 250 VPER----NLLTWTVMISGLAESGFGEESL-KLFNQMKSEGLEPCDYAYAGAIKACGVLG 304
+ E L+T+ V+++ + G + L +MKS+G+ P Y Y I C G
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK-RG 292
Query: 305 SL-DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM------PYVDSV 357
SL Q+ ++ G NAL+ +Y K A V M P + V
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI--V 350
Query: 358 SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSM 417
++N++I+A A+ G +A++L QM ++ PD T+ T+LS AG V+ F+ M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 418 CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLLAGCRIHG- 473
+ G P + I + GKF+E K+ + + P W +LLA +G
Sbjct: 411 -RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 474 NIEL-GIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
+ E+ G+ + PE++ T+ L + Y+ G +++ V + M + GV
Sbjct: 470 DSEVSGVFKEMKRAGFVPERE-TFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 118/590 (20%), Positives = 232/590 (39%), Gaps = 140/590 (23%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M+ DG P +++ +L + L + G+ NTL++C C
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC---CK 290
Query: 61 SSTLVESPVLMASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMT--- 115
+L + A ++F+E + D+ ++ ++ Y ++ A K+L+ M
Sbjct: 291 RGSLHQE------AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 116 -HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 174
P V +N++IS Y R G+ +EA + +M G + D +TYT+L+S G
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 175 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSWNAI 230
+ + +P+ + NA I Y GK + ++FD++ V D+V+WN +
Sbjct: 405 SIFEEMRNAGCKPN----ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 231 LSGYINARRLEEAKFIFRE------VPER------------------------------- 253
L+ + E +F+E VPER
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 254 --NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAI------KACGVLGS 305
+L T+ +++ LA G E+S K+ +M+ +P + Y + K G++ S
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 306 LDNGQQIHSQVI-------------------------------QLGHDSSLSAGNALITM 334
L ++++S VI + G ++ N+++++
Sbjct: 581 L--AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI 638
Query: 335 YAKCGVVGYADMVFLTMP---YVDSV-SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
Y + +V A+ V M + S+ ++N+++ ++ ++ ++ ++L + I PD
Sbjct: 639 YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPD 698
Query: 391 RITFLT----------------ILSACSHAGLVKE--------GQHYFDSM--------- 417
I++ T I S ++G+V + G + DSM
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 418 -CTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM-PFEPSAPIWESL 465
+G P ++ Y ++D C+ + EAK E + +P AP E L
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDL 808
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 159/353 (45%), Gaps = 53/353 (15%)
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGL-FNCGRQLHAY 179
A++A+IS Y R GL+EEA F M G++ + TY ++I A G+ F +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYI 235
+ R VQP N+L+ ++ G AR +FD+M R D+ S+N +L
Sbjct: 330 MQRNGVQPDRITF----NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 236 NARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
+++ A I ++P + N+++++ +I G A++G +E+L LF +M+ G+
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
+Y N L+++Y K G A + M
Sbjct: 446 SY-----------------------------------NTLLSIYTKVGRSEEALDILREM 470
Query: 352 PYV----DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
V D V++NA++ + G+ + +++ +M +E +LP+ +T+ T++ S GL
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
KE F + G+ Y+ LID LC+ G A + + M E +P
Sbjct: 531 KEAMEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 190/460 (41%), Gaps = 109/460 (23%)
Query: 1 MKRDGFAPDPFSFSTVL-----GAMSLIAE---EEWHCQQLHCDVVKWGVMCVPSVLNTL 52
M+R+G PD +F+++L G + A +E +++ DV + NTL
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY---------NTL 380
Query: 53 LSCYICCASSTLVESPVLMASARKLFDEAPLSQ--KDEPSWTTMIAGYVRNDDLASARKL 110
L IC M A ++ + P+ + + S++T+I G+ + A L
Sbjct: 381 LDA-ICKGGQ--------MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 111 LDGMTH-PIA---VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFN 166
M + IA V++N ++S Y + G EEA D R+M S+GI+ D TY
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY--------- 482
Query: 167 TGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP----VR 222
NAL+ Y K GK + ++VF +M +
Sbjct: 483 ------------------------------NALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLF 278
+L++++ ++ GY +EA IFRE L + ++ +I L ++G ++ L
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSA-----GNALIT 333
++M EG+ P Y I A G ++D + S+LSA GN +I
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQ 632
Query: 334 MYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI-QLYEQMLKEDILPDRI 392
++ + + + S N + + + I +++ +M + +I P+ +
Sbjct: 633 LFGQ----------------LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVV 676
Query: 393 TFLTILSACSH------AGLVKEGQHYFDSMCTHYGMTPG 426
TF IL+ACS A ++ E FD+ YG+ G
Sbjct: 677 TFSAILNACSRCNSFEDASMLLEELRLFDNKV--YGVVHG 714
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 136/328 (41%), Gaps = 58/328 (17%)
Query: 241 EEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKAC 300
++ +I RE+ RN V GF E ++K + +G + I
Sbjct: 197 DDCTYIIRELGNRNECDKAV--------GFYEFAVKRERRKNEQG-----KLASAMISTL 243
Query: 301 GVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDS 356
G G + ++I G+ +++ A +ALI+ Y + G+ A VF +M +
Sbjct: 244 GRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNL 303
Query: 357 VSWNAMIAALAQHGRGV-QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD 415
V++NA+I A + G Q + +++M + + PDRITF ++L+ CS GL + ++ FD
Sbjct: 304 VTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 416 SMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIH 472
M T+ + Y L+D +C+ G+ A ++ MP + P+ + +++ G
Sbjct: 364 EM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 473 GNIE-----------LGIQ-----------------AAERLFELTPEQDG--------TY 496
G + LGI +E ++ E TY
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 497 IILSNMYAHLGKWDEVARVRKLMRERGV 524
L Y GK+DEV +V M+ V
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHV 510
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/479 (20%), Positives = 205/479 (42%), Gaps = 35/479 (7%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEW---HCQQLHCDVVKWGVMCVPSVLNTLLSCYI 57
M R P FS A++ + C+QL + + + LN +++C+
Sbjct: 79 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY----TLNIMINCFC 134
Query: 58 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT-- 115
C + S ++ KL E D ++ T+I G ++ A L+D M
Sbjct: 135 RCCKTCFAYS--VLGKVMKLGYEP-----DTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 116 --HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
P V +N++++G R G A D RKM ++ D +TY+++I + G +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV----SWNA 229
L + ++ S + N+L+ K GK + M R++V ++N
Sbjct: 248 ISLFKEMETKGIKSS----VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 230 ILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
+L ++ +L+EA +++E+ R N++T+ ++ G E+ + + M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
P + IK ++ +D+G ++ + + G ++ + L+ + + G + A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 346 MVFLTM----PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSAC 401
+F M D +++ ++ L +G+ +A++++E + K + + + TI+
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
G V++ + F S+ G+ P Y +I LC+ G SEA + M + +AP
Sbjct: 484 CKGGKVEDAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 114/257 (44%), Gaps = 16/257 (6%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ T++ GY + L+ A +LD M P V + ++I GY ++ FR +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
G+ + TY+ L+ +G +L ++ V P + L+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD----VMTYGILLDGLCD 450
Query: 206 CGKLVQAREVFDKMPVRDL----VSWNAILSGYINARRLEEAKFIFREVPER----NLLT 257
GKL +A E+F+ + + V + I+ G ++E+A +F +P + N++T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
+TVMISGL + G E+ L +M+ +G P D Y I+A G L ++ ++
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 318 QLGHDSSLSAGNALITM 334
G + S+ +I M
Sbjct: 571 SCGFSADASSIKMVIDM 587
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 181/398 (45%), Gaps = 53/398 (13%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFD 140
Q + ++ ++ G + D+ A LL+ M V +N +I ++ ++A +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F++M + GI+ + TY+SLIS + G ++ QL + ++ + P+ L NALI
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN----LVTFNALI 262
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
+ K GK V+A ++ D M R D+ ++N++++G+ RL++AK +F + +
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
+L T+ +I G +S E+ +LF +M GL Y I+ G DN Q++
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
Q++ G +P D ++++ ++ L +G+
Sbjct: 383 FKQMVSDG------------------------------VP-PDIMTYSILLDGLCNNGKL 411
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+A+++++ M K +I D + T++ AG V +G F S+ G+ P Y
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNT 470
Query: 433 LIDLLCRAGKFSEA----KKVTESMPFEPSAPIWESLL 466
+I LC EA KK+ E P P + + +L+
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLI 507
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 176/411 (42%), Gaps = 30/411 (7%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ +I + R ++ A LL M P V +++++GY +A +M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTV---VQPSEHFILSVNNALITF 202
MG + D T+T+LI F L N + A V R V QP+ L ++
Sbjct: 107 VEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDRMVQRGCQPN----LVTYGVVVNG 159
Query: 203 YTKCGKLVQAREVFDKMPV----RDLVSWNAILSGYINARRLEEAKFIFREVPER----N 254
K G + A + +KM D+V +N I+ R +++A +F+E+ + N
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHS 314
++T++ +IS L G ++ +L + M + + P + I A G +++H
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 315 QVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHG 370
+I+ D + N+LI + + A +F M + D ++N +I +
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
R +L+ +M ++ D +T+ T++ H G Q F M + G+ P Y
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTY 398
Query: 431 ARLIDLLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHGNIELG 478
+ L+D LC GK +A +V + M + I+ +++ G G ++ G
Sbjct: 399 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 174/416 (41%), Gaps = 57/416 (13%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P +N ++S + ++ KM +GI + YTY LI+ + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILS 232
+++ +PS I+++ ++L+ Y ++ A + D+M D +++ ++
Sbjct: 68 LGKMMKLGYEPS---IVTL-SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 233 GYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESG-----FG------------ 271
G + EA + + +R NL+T+ V+++GL + G F
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 272 ------------------EESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIH 313
+++L LF +M+++G+ P Y+ I G + Q+
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 314 SQVIQLGHDSSLSAGNALITMYAKCGVVGYA-----DMVFLTMPYVDSVSWNAMIAALAQ 368
S +I+ + +L NALI + K G A DM+ ++ D ++N++I
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID-PDIFTYNSLINGFCM 302
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
H R +A Q++E M+ +D PD T+ T++ + V++G F M +H G+
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTV 361
Query: 429 HYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQA 481
Y LI L G A+KV + M + P + LL G +G +E ++
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 177/385 (45%), Gaps = 21/385 (5%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLD----GMTHPIAVAWNAMISGYVRHGLYEEAFD 140
Q D ++ +I G + + A LL+ G V ++ +I ++ ++A +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F +M + GI+ D +TY+SLIS N G ++ +L + +L + P+ + N+LI
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN----VVTFNSLI 317
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPERNLL 256
+ K GKL++A ++FD+M R ++V++N++++G+ RL+EA+ IF + ++ L
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 257 ----TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
T+ +I+G ++ + ++LF M GL Y I DN Q +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAALAQ 368
Q++ G ++ N L+ K G + A +VF + D ++N M + +
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
G+ L+ + + + PD I + T++S GL +E F M G P
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM-KEDGPLPDSG 556
Query: 429 HYARLIDLLCRAGKFSEAKKVTESM 453
Y LI R G + + ++ + M
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEM 581
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 215/500 (43%), Gaps = 60/500 (12%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ MI R L+ A +L M P V N++++G+ EA +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
MG Q D T+T+L+ F N + A V R VV+ + +++ A+I K
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVERMVVKGCQPDLVTYG-AVINGLCK 217
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGL 265
G+ A + +KM E+ K E +++ ++ +I L
Sbjct: 218 RGEPDLALNLLNKM---------------------EKGKI------EADVVIYSTVIDSL 250
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
+ +++L LF +M ++G+ P + Y+ I G + ++ S +++ + ++
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 326 SAGNALITMYAKCGVVGYADMVFLTM------PYVDSVSWNAMIAALAQHGRGVQAIQLY 379
N+LI +AK G + A+ +F M P + V++N++I H R +A Q++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI--VTYNSLINGFCMHDRLDEAQQIF 368
Query: 380 EQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCR 439
M+ +D LPD +T+ T+++ A V +G F M + G+ Y LI +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTYTTLIHGFFQ 427
Query: 440 AGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GT 495
A A+ V + M + P+ + +LL G +G +E + E L + E D T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 496 YIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAV 555
Y I+S GK ++ + + +GVK + I M+ F + E + +
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD----VIAYNTMISGF-CKKGLKEEAYTL 542
Query: 556 YKYLEQLVIEMRKLGYIPDT 575
+ I+M++ G +PD+
Sbjct: 543 F-------IKMKEDGPLPDS 555
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 179/408 (43%), Gaps = 62/408 (15%)
Query: 92 TTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHS 147
TT+I G+ R A K+L+ + P + +N MISGY + G A +M
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 148 MGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCG 207
+ D TY + +LR++ G
Sbjct: 200 --VSPDVVTYNT--------------------ILRSLCDS-------------------G 218
Query: 208 KLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWT 259
KL QA EV D+M R D++++ ++ + A + E+ +R +++T+
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
V+++G+ + G +E++K N M S G +P + +++ G + +++ + +++
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 320 GHDSSLSAGNALITMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGVQA 375
G S+ N LI + G++G A + MP +S+S+N ++ + + +A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
I+ E+M+ PD +T+ T+L+A G V++ + + + G +P Y +ID
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVID 457
Query: 436 LLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHGNIELGIQ 480
L +AGK +A K+ + M +P + SL+ G G ++ I+
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 167/376 (44%), Gaps = 24/376 (6%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMT-HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
D ++ MI+GY + ++ +A +LD M+ P V +N ++ G ++A + +M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 146 HSMGIQMDEYTYTSLISASF-NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYT 204
D TYT LI A+ ++G+ + + L R + N L+
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY-----NVLVNGIC 285
Query: 205 KCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLL 256
K G+L +A + + MP ++++ N IL + R +A+ + ++ + +++
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
T+ ++I+ L G ++ + +M G +P +Y + +D + ++
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM------PYVDSVSWNAMIAALAQHG 370
+ G + N ++T K G V A + + P + +++N +I LA+ G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL--ITYNTVIDGLAKAG 463
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+ +AI+L ++M +D+ PD IT+ +++ S G V E +F G+ P +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF-ERMGIRPNAVTF 522
Query: 431 ARLIDLLCRAGKFSEA 446
++ LC++ + A
Sbjct: 523 NSIMLGLCKSRQTDRA 538
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 144/303 (47%), Gaps = 34/303 (11%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEW-HCQQLHCDVVKWGVMCVPSVLN-TLLSCYIC 58
M G P+ + + +L S+ + W ++L D+++ G PSV+ +L ++C
Sbjct: 300 MPSSGCQPNVITHNIIL--RSMCSTGRWMDAEKLLADMLRKGF--SPSVVTFNILINFLC 355
Query: 59 CASSTLVESPVLMASARKLFDEAPL--SQKDEPSWTTMIAGYVRNDDLASARKLLDGMT- 115
L+ A + ++ P Q + S+ ++ G+ + + A + L+ M
Sbjct: 356 --------RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 116 ---HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 172
+P V +N M++ + G E+A + ++ S G TY ++I GL
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID-----GLAKA 462
Query: 173 GRQLHAYVLRTVVQPSEHFILSVN-NALITFYTKCGKLVQAREVF---DKMPVR-DLVSW 227
G+ A L ++ + ++ ++L+ ++ GK+ +A + F ++M +R + V++
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 228 NAILSGYINARRLEEA----KFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
N+I+ G +R+ + A F+ + N ++T++I GLA G +E+L+L N++ +
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 284 EGL 286
+GL
Sbjct: 583 KGL 585
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 93/240 (38%), Gaps = 13/240 (5%)
Query: 227 WNAILSGYINAR-----RLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQM 281
+ + SGY N+ + F +V N L V +G EE K M
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMV------RTGELEEGFKFLENM 128
Query: 282 KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
G P I+ LG +I + G + N +I+ Y K G +
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188
Query: 342 GYADMVFLTMPYV-DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA 400
A V M D V++N ++ +L G+ QA+++ ++ML+ D PD IT+ ++ A
Sbjct: 189 NNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 401 CSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
V D M G TP Y L++ +C+ G+ EA K MP P
Sbjct: 249 TCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 115/278 (41%), Gaps = 19/278 (6%)
Query: 221 VRDLVSWNAILSGYINARRLEEAKFIFR------EVPERNLLTWTVMISGLAESGFGEES 274
V D++ ++ G+ + +A I VP+ ++T+ VMISG ++G +
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD--VITYNVMISGYCKAGEINNA 191
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
L + ++M + P Y +++ G L ++ +++Q + LI
Sbjct: 192 LSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 335 YAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD 390
+ VG+A + M D V++N ++ + + GR +AI+ M P+
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 391 RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVT 450
IT IL + G + + M G +P + LI+ LCR G A +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 451 ESMP---FEPSAPIWESLLAGCRIHGNIELGIQAAERL 485
E MP +P++ + LL G ++ I+ ER+
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 176/388 (45%), Gaps = 48/388 (12%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFD 140
Q D ++ T++ G + D+ A +K+ G V + +I + +A +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
F +M + GI+ + TY SLI N G ++ +L + ++ + P+ + +ALI
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN----VVTFSALI 332
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
+ K GKLV+A +++D+M R D+ +++++++G+ RL+EAK +F + +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
N++T+ +I G ++ EE ++LF +M GL Y I+ G D Q+I
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
+++ G +P D ++++ ++ L ++G+
Sbjct: 453 FKKMVSDG------------------------------VP-PDIITYSILLDGLCKYGKL 481
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+A+ ++E + K + PD T+ ++ AG V++G F S+ G+ P Y
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTT 540
Query: 433 LIDLLCRAGKFSEAKKVTESMPFEPSAP 460
+I CR G EA + M + + P
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLP 568
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 200/450 (44%), Gaps = 27/450 (6%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P V +N ++S + ++ +M ++ I D Y+Y LI+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILS 232
+++ +P I++++ +L+ Y ++ +A + D+M V + V++N ++
Sbjct: 138 LGKMMKLGYEPD---IVTLS-SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 233 G-YINARRLEEAKFIFREVP---ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
G +++ + E I R V + +L T+ +++GL + G + +L L +M+ +E
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
Y I A ++++ + +++ G ++ N+LI G A +
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 349 LTM------PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSA-C 401
M P V V+++A+I A + G+ V+A +LY++M+K I PD T+ ++++ C
Sbjct: 314 SDMIERKINPNV--VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 402 SHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPS 458
H L E +H F+ M + P Y LI C+A + E ++ M +
Sbjct: 372 MHDRL-DEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 459 APIWESLLAGCRIHGNIELGIQAAERLF-ELTPEQDGTYIILSNMYAHLGKWDEVARVRK 517
+ +L+ G G+ ++ + +++ + P TY IL + GK ++ V +
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 518 LMRERGVKKEPGCSWIEIENMVHVFLVDDA 547
+++ ++ + I IE M V+D
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 169/365 (46%), Gaps = 33/365 (9%)
Query: 73 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH-----PIAVAWNAMIS 127
+A+ LF P + + + T+I G+V + L A+ +L M P +N++I
Sbjct: 340 AAKDLFYRIP--KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 128 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
GY + GL A + M + G + + Y+YT L+ G G+ AY V+
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD-----GFCKLGKIDEAY---NVLNE 449
Query: 188 SEHFILSVN----NALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARR 239
L N N LI+ + K ++ +A E+F +MP + D+ ++N+++SG
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 240 LEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
++ A ++ R++ N +T+ +I+ G +E+ KL N+M +G + Y
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYA-----DMVFLT 350
IK G +D + + ++++ GH S + N LI + G+V A +MV L
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV-LR 628
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
D V++N++I L + GR + ++ ++ E I PD +TF T++S G V +
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 411 QHYFD 415
D
Sbjct: 689 CLLLD 693
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 202/492 (41%), Gaps = 78/492 (15%)
Query: 8 PDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVP------SVLNTLLSCYICCAS 61
P F+F V+ A + E + L D+ K G CVP +++++L C +
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLR-DMTKHG--CVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 62 STLVESPVLMASARKL------------FDEAPLSQK------------DEPSWTTMIAG 97
L+E LM FD + K D+ ++ ++ G
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 98 YVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM-HSMGIQMDEYT 156
+ + +A+ L + P V +N +I G+V HG ++A M S GI D T
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 157 YTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF 216
Y SLI + GL ++ + +P+ + L+ + K GK+ +A V
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY----TILVDGFCKLGKIDEAYNVL 447
Query: 217 DKMPVRDL----VSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAES 268
++M L V +N ++S + R+ EA IFRE+P + ++ T+ +ISGL E
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 269 GFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAG 328
+ +L L M SEG+ Y I A G + +++ ++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE------------- 554
Query: 329 NALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
MVF P +D +++N++I L + G +A L+E+ML++
Sbjct: 555 -----------------MVFQGSP-LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
P I+ +++ +G+V+E + M G TP + LI+ LCRAG+ +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 449 VTESMPFEPSAP 460
+ + E P
Sbjct: 656 MFRKLQAEGIPP 667
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 180/394 (45%), Gaps = 28/394 (7%)
Query: 50 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 109
N LL+C+ C+ +L S + KL E + ++ +++ G+ R D + A
Sbjct: 120 NILLNCFCRCSQLSLALS--FLGKMIKLGHEPSIV-----TFGSLLNGFCRGDRVYDALY 172
Query: 110 LLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 165
+ D M P V +N +I G + + A D +M GI D TY SLIS
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--- 222
++G ++ ++ + + + + P + NALI K G++ +A E +++M R
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPD----VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 223 -DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKL 277
D+V+++ ++ G RL+EA+ +F + + +++T++++I+G +S E +KL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAK 337
F +M G+ Y I+ G L+ ++I +++ G ++ N L+
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 338 CGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
G + A ++ M D V++N +I + + G A +Y + + ++PD T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGE 427
+ T++ GL +E F M G+ P E
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKM-KEDGILPNE 501
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 126/302 (41%), Gaps = 28/302 (9%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M++DG PD ++++++ + + + C + K + N L+
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC-MTKREIYPDVFTFNALI------- 263
Query: 61 SSTLVESPVLMASARKLFDEAPLSQKDEP--SWTTMIAGYVRNDDLASARKLLDGMTH-- 116
+ + E V + A + ++E D +++ +I G L A ++ M
Sbjct: 264 DACVKEGRV--SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 117 --PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 174
P V ++ +I+GY + E F +M G+ + TYT LI G N
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 175 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAI 230
++ ++ V P+ + N L+ GK+ +A + M D+V++N I
Sbjct: 382 EIFRRMVFCGVHPN----IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 231 LSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSEGL 286
+ G A + +A I+ + + L+ T+T M+ GL + G E+ LF +MK +G+
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 287 EP 288
P
Sbjct: 498 LP 499
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 133/328 (40%), Gaps = 19/328 (5%)
Query: 209 LVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISG 264
+VQ R P+ + ++ +LS ++ + +++ ++ NL T ++++
Sbjct: 72 MVQCR------PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNC 125
Query: 265 LAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSS 324
+L +M G EP + + + + + Q++ +G+ +
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185
Query: 325 LSAGNALITMYAKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGVQAIQLYE 380
+ N +I K V A + M D V++N++I+ L GR A ++
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 381 QMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRA 440
M K +I PD TF ++ AC G V E + +++ M + P Y+ LI LC
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM-IRRSLDPDIVTYSLLIYGLCMY 304
Query: 441 GKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG-TY 496
+ EA+++ M + P + L+ G +E G++ + + ++ TY
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Query: 497 IILSNMYAHLGKWDEVARVRKLMRERGV 524
IL Y GK + + + M GV
Sbjct: 365 TILIQGYCRAGKLNVAEEIFRRMVFCGV 392
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 201/489 (41%), Gaps = 53/489 (10%)
Query: 116 HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
+P V +N +IS Y GL EEAF+ M G YTY ++I+ G + ++
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAIL 231
+ A +LR+ + P + +L+ K G +V+ +VF M R DLV +++++
Sbjct: 327 VFAEMLRSGLSPDS----TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 232 SGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
S + + L++A F V E L+ +T++I G G ++ L N+M +G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
Y + L ++ +++ + LI + K G + A +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 348 FLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
F M +D V++N ++ + G A +++ M+ ++ILP I++ +++A
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM---PFEPSAP 460
G + E +D M + + P +I CR+G S+ + E M F P
Sbjct: 563 KGHLAEAFRVWDEMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 461 IWESLLAGCRIHGNIELGIQAAERLFELTPEQDG------TYIILSNMYAHLGKWDEVAR 514
+ +L+ G N+ +++ E EQ G TY + + + + E
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEE---EQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 515 VRKLMRERGVKKEPGC------SWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
V + M ERGV + ++ +N+ F + D EM +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD------------------EMLQ 720
Query: 569 LGYIPDTKF 577
G+ PD KF
Sbjct: 721 RGFSPDDKF 729
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 193/454 (42%), Gaps = 61/454 (13%)
Query: 87 DEPSWTTMIAGYVRNDDLASARK---LLDGMTHPIAV-AWNAMISGYVRHGLYEEAFDTF 142
++ + +I YV+ L A + LL +++ A NA+I VR G E A+ +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
+++ G+ ++ YT +++A G + V V P + N LI+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD----IVTYNTLISA 279
Query: 203 YTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREV------PE 252
Y+ G + +A E+ + MP + + ++N +++G + E AK +F E+ P+
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 253 R---------------------------------NLLTWTVMISGLAESGFGEESLKLFN 279
+L+ ++ M+S SG +++L FN
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 280 QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG 339
+K GL P + Y I+ G + + ++++Q G + N ++ K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 340 VVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFL 395
++G AD +F M + DS + +I + G A++L+++M ++ I D +T+
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 396 TILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM-- 453
T+L G + + + M + + P Y+ L++ LC G +EA +V + M
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKE-ILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 454 -PFEPSAPIWESLLAG-CRIHGNIELGIQAAERL 485
+P+ I S++ G CR GN G E++
Sbjct: 579 KNIKPTVMICNSMIKGYCR-SGNASDGESFLEKM 611
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 195/452 (43%), Gaps = 37/452 (8%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
+++T+I G ++ A +L+D M P + N +++G G EA KM
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
G Q + TY +++ +G L +LR + + + + +I K
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSG----QTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 206 CGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLT 257
G L A +F++M ++ +++++N ++ G+ NA R ++ + R++ +R N++T
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 258 WTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVI 317
++V+I + G E+ +L +M G+ P Y I LD Q+ ++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 318 QLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGV 373
G D ++ N LI Y K + +F M D+V++N +I + G+
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 374 QAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARL 433
A +L+++M+ + P+ +T+ +L G ++ F+ + M Y +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNII 514
Query: 434 IDLLCRAGKFSEAKKVTESMPF---EPSAPIWESLLAGCRIHGNIELGIQAAERLFELTP 490
I +C A K +A + S+P +P + ++ G G + AE LF
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG----PLSEAELLFR-KM 569
Query: 491 EQDG------TYIILSNMYAHLGKWDEVARVR 516
E+DG TY IL + AHLG D V+
Sbjct: 570 EEDGHAPDGWTYNIL--IRAHLGDGDATKSVK 599
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 205/468 (43%), Gaps = 56/468 (11%)
Query: 5 GFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTL 64
G+ P+ +FST++ + L +L +V+ G +NTL++ C S
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVS-EALELVDRMVEMGHKPDLITINTLVNGL--CLSGKE 209
Query: 65 VESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTHP----IAV 120
E+ +L+ K+ + Q + ++ ++ ++ A A +LL M AV
Sbjct: 210 AEAMLLID---KMVEYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
++ +I G +HG + AF+ F +M GI + TY LI N G ++ G +L +
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYIN 236
++ + P+ + + LI + K GKL +A E+ +M R D +++ +++ G+
Sbjct: 325 IKRKINPN----VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 237 ARRLEEAK----FIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
L++A + + + N+ T+ ++I+G ++ ++ L+LF +M G+
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMP 352
Y I+ LG L+ +++ + +MV +P
Sbjct: 441 YNTLIQGFCELGKLNVAKEL------------------------------FQEMVSRKVP 470
Query: 353 YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQH 412
+ V++ ++ L +G +A++++E++ K + D + I+ +A V +
Sbjct: 471 -PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 413 YFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
F S+ G+ PG Y +I LC+ G SEA+ + M + AP
Sbjct: 530 LFCSL-PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTF 142
D ++T++I G+ + + L A +++D M P +N +I+GY + ++ + F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
RKM G+ D TY +LI G N ++L ++ V P+ + L+
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN----IVTYKILLDG 482
Query: 203 YTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----N 254
G+ +A E+F+K+ D+ +N I+ G NA ++++A +F +P +
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+ T+ +MI GL + G E+ LF +M+ +G P + Y I+A
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 355 DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
++++++ +I L GR +A++L ++M++ PD IT T+++ +G E
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 415 DSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLLAGCRI 471
D M YG P Y +++++C++G+ + A ++ M + A + ++ G
Sbjct: 217 DKM-VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 472 HGNIELGIQAAERLFELTPEQDG------TYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
HG+++ A LF E G TY IL + + G+WD+ A++ + M +R +
Sbjct: 276 HGSLD----NAFNLFN-EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 526 KEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRKLGYIPDT 575
N+V ++ D+ E + E+L EM G PDT
Sbjct: 331 ----------PNVVTFSVLIDSFVKE--GKLREAEELHKEMIHRGIAPDT 368
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 197/464 (42%), Gaps = 38/464 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTH-----PIAVAWNAMISGYVRHGLYEEAFDT 141
D T+++ G+ R +L A K+ D M+ P +V+++ +I G G EEAF
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 142 FRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALIT 201
+M G Q TYT LI A + GL + L ++ +P+ H LI
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH----TYTVLID 344
Query: 202 FYTKCGKLVQAREVFDKMPVRD-----LVSWNAILSGYINARRLEEAKFIFREVPER--- 253
+ GK+ +A V KM V+D ++++NA+++GY R+ A + + +R
Sbjct: 345 GLCRDGKIEEANGVCRKM-VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
N+ T+ ++ GL G +++ L +M GL P +Y I G ++ ++
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQ 368
S + + A+I + K G A M +D V+ +I + +
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 369 HGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
G+ A+ + E ++K IL + IL S VKE + G+ P
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI-NKLGLVPSVV 582
Query: 429 HYARLIDLLCRAGKFSEAKKVTESMPFEPSAP-IWESLLAGCRIHGNIELG-IQAAERLF 486
Y L+D L R+G + + ++ E M P ++ + I+G + G ++ AE+L
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII---INGLCQFGRVEEAEKL- 638
Query: 487 ELTPEQDG-------TYIILSNMYAHLGKWDEVARVRKLMRERG 523
L+ QD TY ++ Y + GK D + M ERG
Sbjct: 639 -LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 22/251 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTF 142
D S+ +I G R + +A KLL M P + + A+I+ + + G + A
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA-YVLRTVVQPSEHFILSVNNALIT 201
M GI +DE T T+LI G+ G+ A ++L T+V+ N ++
Sbjct: 500 GLMLRKGISLDEVTGTTLID-----GVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 202 FYTKCGKLVQAREVFDKMP----VRDLVSWNAILSGYINAR------RLEEAKFIFREVP 251
+K K+ + + K+ V +V++ ++ G I + R+ E + +P
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
N+ +T++I+GL + G EE+ KL + M+ G+ P Y +K G LD +
Sbjct: 615 --NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 312 IHSQVIQLGHD 322
+++ G++
Sbjct: 673 TVRAMVERGYE 683
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 232/527 (44%), Gaps = 56/527 (10%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVL--NTLLSCYIC 58
M+ G P+ +++ ++ ++ + E ++L +++ G+M P+V+ N L++ Y
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFE-KARELLGQMLEKGLM--PNVITYNALINGY-- 403
Query: 59 CASSTLVESP--VLMASARKLFDEAPLSQKDEPSWTTMIAGYVRND---DLASARKLLDG 113
C + ++ V + +RKL +P ++ ++ +I GY +++ + K+L+
Sbjct: 404 CKRGMIEDAVDVVELMESRKL---SPNTR----TYNELIKGYCKSNVHKAMGVLNKMLER 456
Query: 114 MTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
P V +N++I G R G ++ A+ M+ G+ D++TYTS+I + +
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV----SWNA 229
L + + V P+ + + ALI Y K GK+ +A + +KM ++ + ++NA
Sbjct: 517 CDLFDSLEQKGVNPN----VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 230 ILSGYINARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSEG 285
++ G +L+EA + ++ + L T T++I L + G + + F QM S G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 286 LEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYAD 345
+P + Y I+ G L + + + +++ + G L ++LI Y G +A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 346 MVF----------------------LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQML 383
V L M Y + A++ ++L E+M+
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 384 KEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKF 443
+ + P+ ++ ++ G ++ + FD M + G++P E + L+ C+ K
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 444 SEAKKVTESMPFEPSAPIWES---LLAGCRIHGNIELGIQAAERLFE 487
+EA KV + M P ES L+ G G E G + L +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 212/504 (42%), Gaps = 69/504 (13%)
Query: 122 WNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL 181
+N +++ R GL +E + +M + + YTY +++ G Q + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 182 RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPV----RDLVSWNAILSGYINA 237
+ P + F + +LI Y + L A +VF++MP+ R+ V++ ++ G A
Sbjct: 246 EAGLDP-DFFTYT---SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 238 RRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAY 293
RR++EA +F ++ + + T+TV+I L S E+L L +M+ G++P + Y
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 294 AGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYA-DMVFL--- 349
I + + +++ Q+++ G ++ NALI Y K G++ A D+V L
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 350 ------TMPY----------------------------VDSVSWNAMIAALAQHGRGVQA 375
T Y D V++N++I + G A
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 376 IQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLID 435
+L M ++PD+ T+ +++ + + V+E FDS+ G+ P Y LID
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALID 540
Query: 436 LLCRAGKFSEAKKVTESMPFE---PSAPIWESLLAGCRIHGNIELGIQAAERLFE--LTP 490
C+AGK EA + E M + P++ + +L+ G G ++ E++ + L P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 491 EQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHP 550
I++ + G +D + M G K + I+ + DA
Sbjct: 601 TVSTDTILIHRLLKD-GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA--- 656
Query: 551 EVHAVYKYLEQLVIEMRKLGYIPD 574
E ++ +MR+ G PD
Sbjct: 657 ---------EDMMAKMRENGVSPD 671
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 144/350 (41%), Gaps = 27/350 (7%)
Query: 44 CVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDD 103
C+P+ L + CA L E+ +L K+ + +S + T +I +++ D
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS-----TDTILIHRLLKDGD 617
Query: 104 LASA----RKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTS 159
A +++L T P A + I Y R G +A D KM G+ D +TY+S
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 219
LI + G N + + T +PS+H LS+ L+ K GK Q +
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM--KYGK--QKGSEPELC 733
Query: 220 PVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFN 279
+ +++ ++ ++ L E P N ++ +I G+ E G + K+F+
Sbjct: 734 AMSNMMEFDTVV-------ELLEKMVEHSVTP--NAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 280 QM-KSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKC 338
M ++EG+ P + + + C L + ++ +I +GH L + LI K
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 339 GVVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
G VF + Y D ++W +I + + G +L+ M K
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 199/469 (42%), Gaps = 66/469 (14%)
Query: 59 CASSTLVESPVLMASARKLFDEAPLSQKDE----------PSWTTMIAGYVRNDDLASAR 108
C S + V++AS ++ + + KDE + T++I G+ +N+DL SA
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 109 KLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 164
L D M P +V ++ +I + ++G E+A + ++KM +G+ + ++I
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVN--NALITFYTKCGKLVQAREVFDKMPVR 222
Q H L+ + E + +V N ++++ K GK +A E+ KM R
Sbjct: 420 LKG-------QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 223 ----DLVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEES 274
++VS+N ++ G+ + ++ A+ +F + E+ L T++++I G + + +
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 275 LKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITM 334
L++ N M S +E Y I +G +++
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL---------------------- 570
Query: 335 YAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
A+M+ V +S+N++I + G A+ YE+M I P+ IT+
Sbjct: 571 --------LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITY 622
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
++++ + + D M + G+ Y LID C+ A + +
Sbjct: 623 TSLMNGLCKNNRMDQALEMRDEM-KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 455 FE---PSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD-GTYIIL 499
E PS PI+ SL++G R GN+ + +++ + D GTY L
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 194/448 (43%), Gaps = 62/448 (13%)
Query: 74 ARKLFDEA-PLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISG 128
A KLFDE+ + T+++ + A +LL M P V++N ++ G
Sbjct: 428 ALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 129 YVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPS 188
+ R + A F + G++ + YTY+ LI F N Q V+ + +
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR----NHDEQNALEVVNHMTSSN 543
Query: 189 EHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV-----SWNAILSGYINARRLEEA 243
V +I K G+ +ARE+ M + S+N+I+ G+ ++ A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 244 KFIFREV----PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+ E+ N++T+T +++GL ++ +++L++ ++MK++G++ AY I
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
++++ + S++++ G + S P +
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPS--------------------------QPI-----Y 692
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC- 418
N++I+ G V A+ LY++MLK+ + D T+ T++ GL+K+G S
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID-----GLLKDGNLILASELY 747
Query: 419 ---THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLLAGCRIH 472
G+ P E Y +++ L + G+F + K+ E M P+ I+ +++AG
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 473 GNIELGIQAAERLFELTPEQDG-TYIIL 499
GN++ + + + + DG T+ IL
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASAR----KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTF 142
D P++ +I G+ + ++ SA +LL+ +P +N++ISG+ G A D +
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
+KM G++ D TYT+LI G +L+ + + P E + N L
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL--- 769
Query: 203 YTKCGKLVQAREVFDKMPVRDLVS----WNAILSGYINARRLEEAKFIFREVPERNLL-- 256
+K G+ V+ ++F++M ++ +NA+++G+ L+EA + E+ ++ +L
Sbjct: 770 -SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Query: 257 --TWTVMISG 264
T+ +++SG
Sbjct: 829 GATFDILVSG 838
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 141/324 (43%), Gaps = 50/324 (15%)
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTHPIAV-----AWNAMISGYVRHGLYEEAFDTFRKM 145
+ T+I G + + AR+LL M + ++N++I G+ + G + A + +M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ-PSEHFILSVNNALITFYT 204
GI + TYTSL++ GL R A +R ++ + ALI +
Sbjct: 611 CGNGISPNVITYTSLMN-----GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 205 KCGKLVQAREVFDKMPVRDLVS----WNAILSGYINARRLEEAKFIFREVPER----NLL 256
K + A +F ++ L +N+++SG+ N + A +++++ + +L
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
T+T +I GL + G + +L+ +M++ GL P + Y + NG Q
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV----------NGLSKKGQF 775
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAI 376
+++ + M+ + V + +NA+IA + G +A
Sbjct: 776 VKV------------VKMFEEMKKNNVTPNVLI---------YNAVIAGHYREGNLDEAF 814
Query: 377 QLYEQMLKEDILPDRITFLTILSA 400
+L+++ML + ILPD TF ++S
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSG 838
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 102/470 (21%), Positives = 191/470 (40%), Gaps = 50/470 (10%)
Query: 89 PSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEE----AFDTFRK 144
P ++ V+ + L A++L M N +R L EE A + +
Sbjct: 199 PYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSR 258
Query: 145 MHSMGIQMDEYTYTSLISASFNT-GLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFY 203
G + D Y+ + A T L L + + PS+ SV I
Sbjct: 259 AIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV----ILAS 314
Query: 204 TKCGKLVQAREVFDKMPVRDLVSWN-----AILSGYINARRLEEAKFIF----REVPERN 254
K G + A + D+M + D +S N ++++G+ L A +F +E P N
Sbjct: 315 VKQGNMDDAIRLKDEM-LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPN 373
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHS 314
+T++V+I ++G E++L+ + +M+ GL P + I+ G L GQ+ H
Sbjct: 374 SVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ--GWL----KGQK-HE 426
Query: 315 QVIQLGHDSSLSAG-------NALITMYAKCGVVGYADMVFLTM------PYVDSVSWNA 361
+ ++L D S G N +++ K G A + M P V VS+N
Sbjct: 427 EALKL-FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV--VSYNN 483
Query: 362 MIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHY 421
++ + A ++ +L++ + P+ T+ ++ C + + M T
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM-TSS 542
Query: 422 GMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEP----SAPIWESLLAGCRIHGNIEL 477
+ Y +I+ LC+ G+ S+A+++ +M E S + S++ G G ++
Sbjct: 543 NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 478 GIQAAERL--FELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
+ A E + ++P TY L N + D+ +R M+ +GVK
Sbjct: 603 AVAAYEEMCGNGISPNVI-TYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 198/424 (46%), Gaps = 33/424 (7%)
Query: 50 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 109
N L++C+ C SS + + KL E D ++T++I G+ + + A
Sbjct: 111 NLLMNCF--CQSSQPYLASSFLGKMMKLGFEP-----DIVTFTSLINGFCLGNRMEEAMS 163
Query: 110 LLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 165
+++ M P V + +I ++G A F +M + GI+ D YTSL++
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--- 222
N+G + L + + ++P + NALI + K GK + A E++++M +R
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPD----VITFNALIDAFVKEGKFLDAEELYNEM-IRMSI 278
Query: 223 --DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLK 276
++ ++ ++++G+ ++EA+ +F + + +++ +T +I+G + ++++K
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
+F +M +GL Y I+ G +G + Q++ S ++ G ++ N L+
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 337 KCGVVGYADMVFLTMPY--VDSV-----SWNAMIAALAQHGRGVQAIQLYEQMLKEDILP 389
G V A M+F M +D V ++N ++ L +G+ +A+ ++E M K ++
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 390 DRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV 449
IT+ I+ AG VK + F S+ + G+ P Y +I L R G EA +
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 450 TESM 453
M
Sbjct: 518 FRKM 521
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 54/247 (21%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++T++I G+ + AR++ M P VA+ ++I+G+ + ++A F +M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
G+ + TYT+LI G N +++ ++++ V P+ + N L+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN----IRTYNVLLHCLCY 399
Query: 206 CGKLVQAREVFDKMPVRDLV-------SWNAILSGYINARRLEEAKFIFREVPER----- 253
GK+ +A +F+ M R++ ++N +L G +LE+A +F ++ +R
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 254 ----------------------------------NLLTWTVMISGLAESGFGEESLKLFN 279
N++T+T MISGL G E+ LF
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Query: 280 QMKSEGL 286
+MK +G+
Sbjct: 520 KMKEDGV 526
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 178/415 (42%), Gaps = 38/415 (9%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTF 142
D +++ +I+ Y + SA +L D M P + ++ Y + G E+A D F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-----VLRTVVQPSEHFILSVNN 197
+M G YTYT LI GL GR AY +LR + P F+ N
Sbjct: 292 EEMKRAGCSPTVYTYTELIK-----GLGKAGRVDEAYGFYKDMLRDGLTPDVVFL----N 342
Query: 198 ALITFYTKCGKLVQAREVFDKMPV----RDLVSWNAILSGYINAR-RLEEAKFIFREVPE 252
L+ K G++ + VF +M + +VS+N ++ ++ + E F ++
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 253 RNL----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDN 308
++ T++++I G ++ E++L L +M +G PC AY I A G +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIA 364
++ ++ + + S +I + KCG + A +F M D ++NA+++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 365 ALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMT 424
+ + G +A L +M + D + IL+ + G+ + F+++ H G+
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-KHSGIK 581
Query: 425 PGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLLAGCRIHGNIE 476
P Y L+ AG F EA ++ M FE A + S+L GN++
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVD 633
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 166/396 (41%), Gaps = 58/396 (14%)
Query: 73 SARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMI 126
SA +LFDE + Q E +TT++ Y + + A L + M P + +I
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 127 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLIS-------------ASFNTGLFNCG 173
G + G +EA+ ++ M G+ D +L++ G++ C
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 174 RQLHAY--VLRTV---------------------VQPSEHFILSVNNALITFYTKCGKLV 210
+ +Y V++ + V PSE F S+ LI Y K ++
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSE-FTYSI---LIDGYCKTNRVE 426
Query: 211 QAREVFDKMPVRDLVSWNAILSGYINA----RRLEEAKFIFREVPER----NLLTWTVMI 262
+A + ++M + A INA +R E A +F+E+ E + + VMI
Sbjct: 427 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMI 486
Query: 263 SGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHD 322
+ G E++ LFN+MK++G P YAY + G ++ + ++ + G
Sbjct: 487 KHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCR 546
Query: 323 SSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAALAQHGRGVQAIQL 378
+ +++ N ++ +A+ GV A +F T+ + D V++N ++ A G +A ++
Sbjct: 547 ADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARM 606
Query: 379 YEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYF 414
+M + D IT+ +IL A + K+ F
Sbjct: 607 MREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 164/420 (39%), Gaps = 93/420 (22%)
Query: 194 SVNNALITFYTKCGKLVQAREVFDKMPVR-----DLVSWNAILSGYINARRLEEAKFIFR 248
S N++I + G+ + EV+ +M D ++++A++S Y R + A +F
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 249 EVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLG 304
E+ + + +T ++ + G E++L LF +MK G P Y Y IK G G
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 305 SLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM------PYVDSVS 358
+D + +++ G + N L+ + K G V VF M P V VS
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV--VS 375
Query: 359 WNAMIAAL------------------------------------AQHGRGVQAIQLYEQM 382
+N +I AL + R +A+ L E+M
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 383 LKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGK 442
++ P + ++++A A + F + ++G YA +I + GK
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR-VYAVMIKHFGKCGK 494
Query: 443 FSEAKKVTESMPFEPSAP---IWESLLA---------------------GCR-------- 470
SEA + M + S P + +L++ GCR
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 471 -IHGNIELGI-QAAERLFELTP----EQDG-TYIILSNMYAHLGKWDEVARVRKLMRERG 523
++G G+ + A +FE + DG TY L +AH G ++E AR+ + M+++G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 162/356 (45%), Gaps = 23/356 (6%)
Query: 113 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 172
G P V +N MI GY + G ++A + R M + G + D+ TY ++I A + F
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWN 228
L+ + +Q H V L K GKL + VF+ M + ++ +
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGL----CKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 229 AILSGYINARRLEEA-KFIFREVPE---RNLLTWTVMISGLAESGFGEESLKLFNQMKSE 284
++ GY + +E+A + + R + E +++T++V+++GL ++G EE+L F+ + +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Query: 285 GLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYA 344
GL Y+ I G G +D +++ ++ + G NALI + K V A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 345 DMVFLTMPYVDSV-----SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
+F M + ++ +++ + + R +A++L++ M+ + I P F + +
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALST 546
Query: 400 ACSHAGLVKEGQHYFDSMCTHYGMTPG--EDHYARLIDLLCRAGKFSEAKKVTESM 453
+G V D + + ED +I+ LC+AG+ EA K+ + +
Sbjct: 547 GLCLSGKVARACKILDELAPMGVILDAACED----MINTLCKAGRIKEACKLADGI 598
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 178/430 (41%), Gaps = 89/430 (20%)
Query: 117 PIAV-AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQ 175
P+ V A NA+I + + G+ EE +RKM GI+ YTY L++ + + +
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
+ + ++P D+V++N ++ GY
Sbjct: 244 VFEVMESGRIKP-----------------------------------DIVTYNTMIKGYC 268
Query: 236 NARRLEEAKFIFREVPER----NLLTWTVMISG-LAESGFGEESLKLFNQMKSEGLEPCD 290
A + ++A R++ R + +T+ MI A+S FG + L+ +M +G++
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG-SCVALYQEMDEKGIQVPP 327
Query: 291 YAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLT 350
+A++ I G L+ G + +I+ G +++ LI YAK G V
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE-------- 379
Query: 351 MPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
AI+L +M+ E PD +T+ +++ G V+E
Sbjct: 380 -----------------------DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFE---PSAPIWESLLA 467
YF + C G+ Y+ LID L +AG+ EA+++ E M + + + +L+
Sbjct: 417 LDYFHT-CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 468 GCRIHGNIELGIQAAERLFELTPEQDG------TY-IILSNMYAHLGKWDEVARVRKLMR 520
H ++ I LF+ E++G TY I+LS M+ + +E ++ +M
Sbjct: 476 AFTKHRKVDEAIA----LFKRMEEEEGCDQTVYTYTILLSGMFKE-HRNEEALKLWDMMI 530
Query: 521 ERGVKKEPGC 530
++G+ C
Sbjct: 531 DKGITPTAAC 540
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 138/332 (41%), Gaps = 60/332 (18%)
Query: 91 WTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
+T +I GY ++ + A +LL M P V ++ +++G ++G EEA D F
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
G+ ++ Y+SLI GL GR V +E
Sbjct: 425 FDGLAINSMFYSSLID-----GLGKAGR----------VDEAERLF-------------- 455
Query: 207 GKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPE-----RNLLTWTVM 261
E+ +K RD +NA++ + R+++EA +F+ + E + + T+T++
Sbjct: 456 ------EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGH 321
+SG+ + EE+LKL++ M +G+ P + + G + +I ++ +G
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 322 DSSLSAGNALITMYAKCGVV----GYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQ 377
+A +I K G + AD + V MI AL + G+ A++
Sbjct: 570 ILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMK 628
Query: 378 L--------YEQMLKEDILPDRITFLTILSAC 401
L YE+M + R+ F T+L C
Sbjct: 629 LMHSKIGIGYERM---GSVKRRVKFTTLLETC 657
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 136/338 (40%), Gaps = 20/338 (5%)
Query: 237 ARRLEEAKFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
A+ ++ +F+ E+ + + +I + G EE L ++ +MK G+EP Y
Sbjct: 165 AKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYT 224
Query: 293 YAGAIKACGVLGSLDNGQQIHSQVIQLGH-DSSLSAGNALITMYAKCGVVGYADMVFLTM 351
Y + +D+ +++ +V++ G + N +I Y K G A M
Sbjct: 225 YNFLMNGLVSAMFVDSAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM 283
Query: 352 PY----VDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLV 407
D +++ MI A + LY++M ++ I F ++ G +
Sbjct: 284 ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKL 343
Query: 408 KEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM---PFEPSAPIWES 464
EG F++M G P Y LID ++G +A ++ M F+P +
Sbjct: 344 NEGYTVFENM-IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 465 LLAGCRIHGNIELGIQAAERL-FELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERG 523
++ G +G +E + F+ Y L + G+ DE R+ + M E+G
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 524 VKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQ 561
++ C I+ VD+A+ A++K +E+
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAI-----ALFKRMEE 495
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 142/614 (23%), Positives = 256/614 (41%), Gaps = 59/614 (9%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
M +G P P F++++ A + + + L +VK G M V N L+ IC
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK-KMVKCGHMPGYVVYNILIGS-ICGD 420
Query: 61 SSTLVESPVLMASARKLFDE-----APLSQKDEPSWTTMIAGYVRNDDLASA-RKLLDGM 114
+L + L+ A K + E L++ + S+T + + + S R+++
Sbjct: 421 KDSL--NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 115 THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGR 174
P ++ +++ E AF F +M G+ D YTYT ++ + GL R
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 175 QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP----VRDLVSWNAI 230
+ + P+ + ALI Y K K+ A E+F+ M + ++V+++A+
Sbjct: 539 KWFNEMREVGCTPN----VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 231 LSGYINARRLEEAKFIF------REVP-------------ER-NLLTWTVMISGLAESGF 270
+ G+ A ++E+A IF ++VP ER N++T+ ++ G +S
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 271 GEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNA 330
EE+ KL + M EG EP Y I +G LD Q++ +++ + G ++L ++
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 331 LITMYAKCGVVGYADMVFLTM------PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
LI Y K A V M P V V + MI L + G+ +A +L + M +
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNV--VIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
+ P+ +T+ ++ G ++ + M + G+ P Y LID C+ G
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALD 831
Query: 445 EAKKVTESMPFEPSAPIWESLLAGCR--IHGNIELGIQAAERLFELTPEQDGTYIILSNM 502
A + E M W + AG R I G + I++ L E+ QD T LS
Sbjct: 832 VAHNLLEEM----KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG--QDDTAPFLSVY 885
Query: 503 YAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQL 562
+ + R+ +R + ++ + + + + +V + QL
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF----QL 941
Query: 563 VIEMRKLGYIPDTK 576
EM K G IP+ +
Sbjct: 942 FSEMTKKGVIPEMQ 955
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 197/480 (41%), Gaps = 74/480 (15%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTG-LFNCGRQ 175
P V + +ISG L+EEA D +M + + TY++L+ N L C R
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 176 L-------------------HAY-----------VLRTVVQPSEHFILSVNNALITFYT- 204
L HAY +L+ +V+ V N LI
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 205 -----KCGKLVQAREVFDKMPVRDLVSWNAILSGYI----NARRLEEAKFIFREVPERNL 255
C L A + + +M +V +S + +A + E+A + RE+ +
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 256 L----TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
+ T++ +++ L + E + LF +MK GL Y Y + + G ++ ++
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM------PYVDSVSWNAMIAA 365
+++ ++G ++ ALI Y K V YA+ +F TM P + V+++A+I
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI--VTYSALIDG 597
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPD----------------RITFLTILSACSHAGLVKE 409
+ G+ +A Q++E+M +PD +T+ +L + V+E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 410 GQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLL 466
+ D+M G P + Y LID LC+ GK EA++V M F + + SL+
Sbjct: 658 ARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 467 AGCRIHGNIELGIQAAERLFELTPEQDGT-YIILSNMYAHLGKWDEVARVRKLMRERGVK 525
+L + ++ E + + Y + + +GK DE ++ ++M E+G +
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 143/373 (38%), Gaps = 82/373 (21%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++ ++ G+ ++ + ARKLLD M+ P + ++A+I G + G +EA + +M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTK 205
G YTY+SLI F + ++ + +L P
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP------------------ 742
Query: 206 CGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVM 261
++V + ++ G + +EA + + + E+ N++T+T M
Sbjct: 743 -----------------NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 262 ISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQ--- 318
I G G E L+L +M S+G+ P Y I C G+LD + ++ Q
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 319 ---------------------------LGHDSS---LSAGNALITMYAKCGVVGYA---- 344
+G D + LS LI K + A
Sbjct: 846 PTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 345 -DMVFLTMPYVD-SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACS 402
++ + VD S ++N++I +L + A QL+ +M K+ ++P+ +F +++
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965
Query: 403 HAGLVKEGQHYFD 415
+ E D
Sbjct: 966 RNSKISEALLLLD 978
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 172/454 (37%), Gaps = 62/454 (13%)
Query: 89 PSWTTMIAGYVRNDDLASARKLL----DGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRK 144
P + ++ VR+DD + L D N ++ + R+G + A + +
Sbjct: 166 PVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGR 225
Query: 145 MHSMGIQMDEYTYTSLISASFNTGLFNCGRQLH------------------AYVLRTVVQ 186
+ + TY LI A + +H AY L V +
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK 285
Query: 187 PSEHFILSVNNALI---TFYTK-------CGKLVQAREVFDKMP----VRDLVSWNAILS 232
E L + FYTK +A + ++M + ++V+++ +L
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 233 GYINARRLEEAKFIFREV------PERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGL 286
G +N ++L K + + P + + ++ SG + KL +M G
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403
Query: 287 EPCDYAYAGAIKA-CGVLGS-----LDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
P Y I + CG S LD ++ +S+++ G L+ N C
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG--VVLNKINVSSFTRCLCSA 461
Query: 341 VGYADMVFLTMPYV------DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
Y + + D+ +++ ++ L + A L+E+M + ++ D T+
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 395 LTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMP 454
++ + AGL+++ + +F+ M G TP Y LI +A K S A ++ E+M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 455 FE---PSAPIWESLLAGCRIHGNIELGIQAAERL 485
E P+ + +L+ G G +E Q ER+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/466 (19%), Positives = 202/466 (43%), Gaps = 54/466 (11%)
Query: 73 SARKLFDEAPLSQ--KDEPSWTTMIAGYVR----NDDLASARKLLDGMTHPIAVAWNAMI 126
+AR LF+E D ++ +MI G+ + +D + ++ D P + +NA+I
Sbjct: 280 AARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 127 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ 186
+ + + G + +R+M G++ + +Y++L+ A G+ + + + R +
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 187 PSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEE 242
P+E+ +LI K G L A + ++M ++V++ A++ G +A R++E
Sbjct: 400 PNEY----TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 243 AKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIK 298
A+ +F ++ NL ++ +I G ++ + +L+L N++K G++P Y I
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 299 ACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVS 358
L SL+ + A ++ +CG+ +S+
Sbjct: 516 G---LCSLE----------------KIEAAKVVMNEMKECGIKA------------NSLI 544
Query: 359 WNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMC 418
+ ++ A + G + + L ++M + DI +TF ++ LV + YF+ +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 419 THYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM---PFEPSAPIWESLLAGCRIHGNI 475
+G+ + +ID LC+ + A + E M P + SL+ G GN+
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 476 ELGIQAAERLFELTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRE 521
+ +++ E+ + D + +++ L +++ + R + E
Sbjct: 665 LEALALRDKMAEIGMKLD--LLAYTSLVWGLSHCNQLQKARSFLEE 708
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 18/357 (5%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P V+++ ++ + + G+ ++A + M +G+ +EYTYTSLI A+ G + +L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMP----VRDLVSWNAILS 232
+L+ V+ + + ALI ++ +A E+F KM + +L S+NA++
Sbjct: 425 GNEMLQVGVEWN----VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 233 GYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
G++ A+ ++ A + E+ R +LL + I GL E + + N+MK G++
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
Y + A G+ G + ++ +L + ++ LI K +V A F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 349 LTMP-----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
+ ++ + AMI L + + A L+EQM+++ ++PDR + +++
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
G V E D M GM Y L+ L + +A+ E M E P
Sbjct: 661 QGNVLEALALRDKM-AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/468 (19%), Positives = 192/468 (41%), Gaps = 71/468 (15%)
Query: 117 PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQL 176
P + N ++ + + G ++ F+ M G + +TY +I G R L
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 177 HAYV-LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAIL 231
+ R +V + + N++I + K G+L F++M D++++NA++
Sbjct: 285 FEEMKFRGLVPDTVTY-----NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALI 339
Query: 232 SGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLE 287
+ + +L +RE+ + N+++++ ++ + G ++++K + M+ GL
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 288 PCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMV 347
P +Y Y I A +G+L + ++ ++++Q+G + ++ ALI + A+ +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 348 FLTMPYVDSV----SWNAMIAALAQHGRGVQAIQLYEQMLKEDILPD------------- 390
F M + S+NA+I + +A++L ++ I PD
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 391 ----------------------RITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGED 428
+ + T++ A +G EG H D M +
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM-KELDIEVTVV 578
Query: 429 HYARLIDLLCRAGKFSEA----KKVTESMPFEPSAPIWESLLAG-CRIHGNIELGIQAAE 483
+ LID LC+ S+A +++ + +A I+ +++ G C+ + ++AA
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN-----QVEAAT 633
Query: 484 RLFE------LTPEQDGTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
LFE L P++ ++ + G E +R M E G+K
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMDGNFKQ-GNVLEALALRDKMAEIGMK 680
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 10/243 (4%)
Query: 257 TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQV 316
+ + S L + G EE+++ F++MK + P + G + LG D+ ++ +
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 317 IQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRG 372
I G ++ N +I K G V A +F M + D+V++N+MI + GR
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYAR 432
+ +E+M PD IT+ +++ G + G ++ M + G+ P Y+
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN-GLKPNVVSYST 372
Query: 433 LIDLLCRAGKFSEAKKVTESMP---FEPSAPIWESLL-AGCRIHGNIELGIQAAERLFEL 488
L+D C+ G +A K M P+ + SL+ A C+I GN+ + + ++
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI-GNLSDAFRLGNEMLQV 431
Query: 489 TPE 491
E
Sbjct: 432 GVE 434
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/484 (19%), Positives = 188/484 (38%), Gaps = 70/484 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCV-PSVL--NTLLSCYI 57
MK G PD ++++++ + + C + MC P V+ N L++C+
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLD----DTVCFFEEMKDMCCEPDVITYNALINCF- 342
Query: 58 CCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMTH- 116
C L P+ + R++ + + + S++T++ + + + A K M
Sbjct: 343 -CKFGKL---PIGLEFYREM--KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 117 ---PIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG 173
P + ++I + G +AF +M +G++ + TYT+LI +
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 174 RQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNA 229
+L + V P+ L+ NALI + K + +A E+ +++ R DL+ +
Sbjct: 457 EELFGKMDTAGVIPN----LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 230 ILSGYINARRLEEAKFIFREVPE----RNLLTWTVMISGLAESGFGEESLKLFNQMKSEG 285
+ G + ++E AK + E+ E N L +T ++ +SG E L L ++MK
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 286 LEPCDYAYAGAI----------KACGVLGSLDN--GQQIHSQVIQ-----LGHDSSLSAG 328
+E + I KA + N G Q ++ + L D+ + A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 329 NALITMYAKCGVV-----------------------GYADMVFLTMPYVDSVSWNAMIAA 365
L + G+V D + +D +++ +++
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
L+ + +A E+M+ E I PD + +++L G + E + H +T
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Query: 426 GEDH 429
D+
Sbjct: 753 DNDN 756
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 175/398 (43%), Gaps = 32/398 (8%)
Query: 87 DEPSWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTF 142
D S+ +I G ++ + LL +T P V + +I G + G E+A D F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITF 202
+M +G+ +E TYT LI+ F G+ G +++ + V P+ L N ++
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN----LYTYNCVMNQ 277
Query: 203 YTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER----N 254
K G+ A +VFD+M R ++V++N ++ G +L EA + ++ N
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 255 LLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHS 314
L+T+ +I G G ++L L +KS GL P Y + G ++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 315 QVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAALAQHG 370
++ + G S LI +A+ + A + L+M + D +++ +I G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 371 RGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHY----FDSMCTHYGMTPG 426
+ +A +L++ M++++ P+ + + T++ G KEG Y + P
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMI-----LGYCKEGSSYRALKLLKEMEEKELAPN 512
Query: 427 EDHYARLIDLLCRAGKFSEAKKVTESM---PFEPSAPI 461
Y +I++LC+ K EA+++ E M +PS I
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 165/426 (38%), Gaps = 59/426 (13%)
Query: 160 LISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM 219
+IS ++ F LH Y+ + ++ + V +I Y + L + F++M
Sbjct: 65 VISGKIHSQFFTSSSLLH-YLTESETSKTKFRLYEV---IINSYVQSQSLNLSISYFNEM 120
Query: 220 PVRDLVS----WNAILSGYINARRLEEAKFIFREVPERNLL---TWTVMISGLAESGFGE 272
V +N +L+ + + + F E + +L ++ ++I G E+G E
Sbjct: 121 VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIE 180
Query: 273 ESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALI 332
+S L ++ G P Y I C G ++ + + ++ +LG ++ LI
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 333 TMYAKCGVVGYADMVFLTMP----YVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
K GV ++ M + + ++N ++ L + GR A Q++++M + +
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKK 448
+ +T+ T++ + E D M + G+ P Y LID C GK +A
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 449 VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAHLGK 508
+ + +P SL+ TY IL + + G
Sbjct: 360 LCRDLKSRGLSP---SLV----------------------------TYNILVSGFCRKGD 388
Query: 509 WDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLVIEMRK 568
A++ K M ERG+K S + ++ F D + + QL + M +
Sbjct: 389 TSGAAKMVKEMEERGIKP----SKVTYTILIDTFARSDNMEKAI--------QLRLSMEE 436
Query: 569 LGYIPD 574
LG +PD
Sbjct: 437 LGLVPD 442
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 133/552 (24%), Positives = 222/552 (40%), Gaps = 96/552 (17%)
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
+TT I + + + A KL M P V +N +I G G Y+EAF KM
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYTK 205
G++ TY+ L+ GL R AY VL+ + + + V N LI + +
Sbjct: 323 ERGMEPTLITYSILVK-----GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 206 CGKLVQAREVFDKMPVRDL----VSWNAILSGYINARRLEEAKFIFREV----------- 250
G L +A E+ D M + L ++N ++ GY + + A+ + +E+
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 251 ------------------------------PERNLLTWTVMISGLAESGFGEESLKLFNQ 280
P LL T +ISGL + G ++L+L+ Q
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL--TTLISGLCKHGKHSKALELWFQ 495
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
++G + G LD +I +++ G + N LI+ C
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS---GCCG 552
Query: 341 VGYADMVFLTMPYV-------DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
D F+ + + D+ +++ +I L + +AIQ ++ + +LPD T
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
+ ++ C A +EGQ +FD M + + P Y LI CR+G+ S A ++ E M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 454 P---FEPSAPIWESLLAGCRIHGNIELGIQAAERLFE------LTPEQDGTYIILSNMYA 504
P++ + SL+ G I +E A+ LFE L P Y L + Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVE----EAKLLFEEMRMEGLEPNV-FHYTALIDGYG 726
Query: 505 HLGKWDEVARVRKLMRERGVKK-EPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLV 563
LG ++ +V L+RE K P + I M+ + D V +L+
Sbjct: 727 KLG---QMVKVECLLREMHSKNVHP--NKITYTVMIGGYARDGNVTEA--------SRLL 773
Query: 564 IEMRKLGYIPDT 575
EMR+ G +PD+
Sbjct: 774 NEMREKGIVPDS 785
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN-------AMISGYVRHGLYEEAFDTF 142
++ T+I GY +N +A +LL M +++ +N ++I H +++ A
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEM---LSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ-PSEHFILS--VNNAL 199
+M + T+LIS GL C H+ L Q ++ F++ +NAL
Sbjct: 459 GEMLLRNMSPGGGLLTTLIS-----GL--CKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 200 ITFYTKCGKLVQA----REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 255
+ + GKL +A +E+ + V D VS+N ++SG ++L+EA E+ +R L
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 256 ----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
T++++I GL EE+++ ++ K G+ P Y Y+ I C + GQ+
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+++ P ++V +N +I A + GR
Sbjct: 632 FFDEMMSKN-----------------------------VQP--NTVVYNHLIRAYCRSGR 660
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
A++L E M + I P+ T+ +++ S V+E + F+ M G+ P HY
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYT 719
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPE 491
LID + G+ + + + M + P
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHP------------------------------- 748
Query: 492 QDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
TY ++ YA G E +R+ MRE+G+
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 43/283 (15%)
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
V++N +ISG +EAF +M G++ D YTY+ LI GLFN + A
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-----CGLFNMNKVEEA- 594
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
I F+ C + +P D+ +++ ++ G A R
Sbjct: 595 --------------------IQFWDDCKR-------NGMLP--DVYTYSVMIDGCCKAER 625
Query: 240 LEEAKFIFREVPERNLLTWTV----MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
EE + F E+ +N+ TV +I SG +L+L MK +G+ P Y
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM---- 351
IK ++ ++ + + ++ G + ++ ALI Y K G + + + M
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
+ + +++ MI A+ G +A +L +M ++ I+PD IT+
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 29/271 (10%)
Query: 50 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 109
NTL+S CC L E+ + + K + D +++ +I G + + A +
Sbjct: 544 NTLISG--CCGKKKLDEAFMFLDEMVK-----RGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 110 LLD-----GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 164
D GM P ++ MI G + EE + F +M S +Q + Y LI A
Sbjct: 597 FWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 224
+G + +L + + P+ + +LI + ++ +A+ +F++M + L
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNS----ATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 225 ----VSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLK 276
+ A++ GY ++ + + + RE+ +N+ +T+TVMI G A G E+ +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 277 LFNQMKSEGLEPCDYAYA----GAIKACGVL 303
L N+M+ +G+ P Y G +K GVL
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 133/552 (24%), Positives = 222/552 (40%), Gaps = 96/552 (17%)
Query: 91 WTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
+TT I + + + A KL M P V +N +I G G Y+EAF KM
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY-VLRTVVQPSEHFILSVNNALITFYTK 205
G++ TY+ L+ GL R AY VL+ + + + V N LI + +
Sbjct: 323 ERGMEPTLITYSILVK-----GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 206 CGKLVQAREVFDKMPVRDL----VSWNAILSGYINARRLEEAKFIFREV----------- 250
G L +A E+ D M + L ++N ++ GY + + A+ + +E+
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 251 ------------------------------PERNLLTWTVMISGLAESGFGEESLKLFNQ 280
P LL T +ISGL + G ++L+L+ Q
Sbjct: 438 FTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL--TTLISGLCKHGKHSKALELWFQ 495
Query: 281 MKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
++G + G LD +I +++ G + N LI+ C
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS---GCCG 552
Query: 341 VGYADMVFLTMPYV-------DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRIT 393
D F+ + + D+ +++ +I L + +AIQ ++ + +LPD T
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 394 FLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
+ ++ C A +EGQ +FD M + + P Y LI CR+G+ S A ++ E M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 454 P---FEPSAPIWESLLAGCRIHGNIELGIQAAERLFE------LTPEQDGTYIILSNMYA 504
P++ + SL+ G I +E A+ LFE L P Y L + Y
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVE----EAKLLFEEMRMEGLEPNV-FHYTALIDGYG 726
Query: 505 HLGKWDEVARVRKLMRERGVKK-EPGCSWIEIENMVHVFLVDDAVHPEVHAVYKYLEQLV 563
LG ++ +V L+RE K P + I M+ + D V +L+
Sbjct: 727 KLG---QMVKVECLLREMHSKNVHP--NKITYTVMIGGYARDGNVTEA--------SRLL 773
Query: 564 IEMRKLGYIPDT 575
EMR+ G +PD+
Sbjct: 774 NEMREKGIVPDS 785
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 184/453 (40%), Gaps = 91/453 (20%)
Query: 90 SWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWN-------AMISGYVRHGLYEEAFDTF 142
++ T+I GY +N +A +LL M +++ +N ++I H +++ A
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEM---LSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 143 RKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQ-PSEHFILS--VNNAL 199
+M + T+LIS GL C H+ L Q ++ F++ +NAL
Sbjct: 459 GEMLLRNMSPGGGLLTTLIS-----GL--CKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 200 ITFYTKCGKLVQA----REVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNL 255
+ + GKL +A +E+ + V D VS+N ++SG ++L+EA E+ +R L
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 256 ----LTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
T++++I GL EE+++ ++ K G+ P Y Y+ I C + GQ+
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+++ P ++V +N +I A + GR
Sbjct: 632 FFDEMMSKN-----------------------------VQP--NTVVYNHLIRAYCRSGR 660
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
A++L E M + I P+ T+ +++ S V+E + F+ M G+ P HY
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYT 719
Query: 432 RLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPE 491
LID + G+ + + + M + P
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHP------------------------------- 748
Query: 492 QDGTYIILSNMYAHLGKWDEVARVRKLMRERGV 524
TY ++ YA G E +R+ MRE+G+
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 43/283 (15%)
Query: 120 VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAY 179
V++N +ISG +EAF +M G++ D YTY+ LI GLFN + A
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-----CGLFNMNKVEEA- 594
Query: 180 VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARR 239
I F+ C + +P D+ +++ ++ G A R
Sbjct: 595 --------------------IQFWDDCKR-------NGMLP--DVYTYSVMIDGCCKAER 625
Query: 240 LEEAKFIFREVPERNLLTWTV----MISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAG 295
EE + F E+ +N+ TV +I SG +L+L MK +G+ P Y
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM---- 351
IK ++ ++ + + ++ G + ++ ALI Y K G + + + M
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 352 PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITF 394
+ + +++ MI A+ G +A +L +M ++ I+PD IT+
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 29/271 (10%)
Query: 50 NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARK 109
NTL+S CC L E+ + + K + D +++ +I G + + A +
Sbjct: 544 NTLISG--CCGKKKLDEAFMFLDEMVK-----RGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 110 LLD-----GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 164
D GM P ++ MI G + EE + F +M S +Q + Y LI A
Sbjct: 597 FWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDL 224
+G + +L + + P+ + +LI + ++ +A+ +F++M + L
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNS----ATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Query: 225 ----VSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLK 276
+ A++ GY ++ + + + RE+ +N+ +T+TVMI G A G E+ +
Sbjct: 712 EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 277 LFNQMKSEGLEPCDYAYA----GAIKACGVL 303
L N+M+ +G+ P Y G +K GVL
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 208/472 (44%), Gaps = 64/472 (13%)
Query: 5 GFAPDPFSFSTVLGAMSL---IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCAS 61
G+ PD +FST++ L ++E ++ + ++ V +++N L C
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL------CLK 188
Query: 62 STLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA----RKLLDGMTHP 117
+ E+ VL+ + Q DE ++ ++ ++ + A A RK+ +
Sbjct: 189 GRVSEALVLIDRMVEYG-----FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 118 IAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCG-RQL 176
V ++ +I + G +++A F +M GI+ D TY+SLI N G ++ G + L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 177 HAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILS 232
+ R ++ F +ALI + K GKL++A+E++++M R D +++N+++
Sbjct: 304 REMIGRNIIPDVVTF-----SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 233 GYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEP 288
G+ L EA +F + E +++T++++I+ ++ ++ ++LF ++ S+GL P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 289 CDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVF 348
Y + G L+ +++ +++ G S+
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV----------------------- 455
Query: 349 LTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVK 408
V++ ++ L +G +A++++E+M K + + I+ +A V
Sbjct: 456 --------VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 409 EGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
+ F S+ + G+ P Y +I LC+ G SEA + M + P
Sbjct: 508 DAWSLFCSL-SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 194/456 (42%), Gaps = 63/456 (13%)
Query: 111 LDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLF 170
L+G+ H + MI+ Y R AF + +G + D T+++L++ G
Sbjct: 98 LNGIEHDM-YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN-----GFC 151
Query: 171 NCGRQLHAYVL-RTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM------PVRD 223
GR A L +V+ + L + LI G++ +A + D+M P D
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP--D 209
Query: 224 LVSWNAILSGYINARRLEEAKFIFREVPERNL----LTWTVMISGLAESGFGEESLKLFN 279
V++ +L+ + A +FR++ ERN+ + ++++I L + G +++L LFN
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 280 QMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCG 339
+M+ +G++ Y+ I G D+G ++ ++I G +I
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI----------GRNIIP------ 313
Query: 340 VVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILS 399
D V+++A+I + G+ ++A +LY +M+ I PD IT+ +++
Sbjct: 314 ---------------DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 400 ACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKV---TESMPFE 456
+ E FD M + G P Y+ LI+ C+A + + ++ S
Sbjct: 359 GFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 457 PSAPIWESLLAGCRIHGNIELGIQAAERLFEL-----TPEQDGTYIILSNMYAHLGKWDE 511
P+ + +L+ G G + AA+ LF+ P TY IL + G+ ++
Sbjct: 418 PNTITYNTLVLGFCQSGK----LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 512 VARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDA 547
+ + M++ + G I I M + VDDA
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 121/247 (48%), Gaps = 26/247 (10%)
Query: 71 MASARKLFDE------APLSQKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAV 120
+ A++L++E AP D ++ ++I G+ + + L A ++ D M P V
Sbjct: 331 LLEAKELYNEMITRGIAP----DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 121 AWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYV 180
++ +I+ Y + ++ FR++ S G+ + TY +L+ +G N ++L +
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 181 LRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV----SWNAILSGYIN 236
+ V PS + L+ G+L +A E+F+KM + +N I+ G N
Sbjct: 447 VSRGVPPS----VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 237 ARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYA 292
A ++++A +F + ++ +++T+ VMI GL + G E+ LF +MK +G P D+
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 293 YAGAIKA 299
Y I+A
Sbjct: 563 YNILIRA 569
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 196/443 (44%), Gaps = 45/443 (10%)
Query: 113 GMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 172
G+T P VA+N+MI+ Y + L+ EA ++M+ G+ + +Y++L+S F
Sbjct: 255 GIT-PDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF-- 311
Query: 173 GRQLHAY-VLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVF---DKMPVR-DLVSW 227
L A V + + + L+ N +I Y + + +A +F KM + ++VS+
Sbjct: 312 ---LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSY 368
Query: 228 NAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMKS 283
N IL Y A EA +FR + E+N++T+ MI ++ E++ L +M+S
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 284 EGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGY 343
G+EP Y+ I G G LD + ++ G + +I Y + G++G+
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGH 488
Query: 344 ADMVFLTMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
A + + D++ I LA+ GR +A ++ Q + + D F +++ S
Sbjct: 489 AKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 404 AGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWE 463
F+ M T G P + A +++ + +F +A V M E
Sbjct: 549 NQRYVNVIEVFEKMRTA-GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE------- 600
Query: 464 SLLAGC----RIHGNIELGIQAAERLFELTP------EQDGT------YIILSNMYAHLG 507
GC +H + L + ++++ FE+ E D +++++ +Y
Sbjct: 601 ----GCVFPDEVHFQM-LSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERAD 655
Query: 508 KWDEVARVRKLMRERGVKKE-PG 529
K ++ +RV MRERG+ K PG
Sbjct: 656 KLNDASRVMNRMRERGILKPFPG 678
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/473 (20%), Positives = 199/473 (42%), Gaps = 32/473 (6%)
Query: 73 SARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASARKLLD-----GMTHPIAVAWNAMIS 127
+ ++LF + + S M++ R +D + LLD P A+N ++
Sbjct: 104 NEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLR 163
Query: 128 GYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQP 187
+R ++ A F +M + D YTY++LI++ G+F+ L+ + Q
Sbjct: 164 NVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW----LQKMEQD 219
Query: 188 SEHFILSVNNALITFYTKCGKLVQAREVFDKMP----VRDLVSWNAILSGYINARRLEEA 243
L + + LI + +A +F ++ DLV++N++++ Y A+ EA
Sbjct: 220 RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREA 279
Query: 244 KFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEG----LEPCDYAYAG 295
+ + +E+ E N ++++ ++S E+ E+L +F +MK L C+
Sbjct: 280 RLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI---- 335
Query: 296 AIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVD 355
I G L + ++ + ++ + ++ + N ++ +Y + + G A +F M D
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD 395
Query: 356 ----SVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQ 411
V++N MI + +A L ++M I P+ IT+ TI+S AG +
Sbjct: 396 IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAA 455
Query: 412 HYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRI 471
F + + G+ + Y +I R G AK++ + + P E+ +
Sbjct: 456 TLFQKLRSS-GVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIP-RETAITILAK 513
Query: 472 HGNIELGIQAAERLFELTPEQD-GTYIILSNMYAHLGKWDEVARVRKLMRERG 523
G E + FE +D + + N+Y+ ++ V V + MR G
Sbjct: 514 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAG 566
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 135/596 (22%), Positives = 241/596 (40%), Gaps = 88/596 (14%)
Query: 1 MKRDGFAPDPFSFSTVLGAMSLIAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCA 60
MK PD F+++ +L M + EE + M +V N +L C
Sbjct: 153 MKEFDCRPDVFTYNVILRVM--MREEVFF-------------MLAFAVYNEMLKCN---C 194
Query: 61 SSTLVESPVLM---------ASARKLFDEAPLS--QKDEPSWTTMIAGYVRNDDLASARK 109
S L +LM + A+K+FD+ + ++T +I+G + ARK
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 110 LLDGM----THPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASF 165
L M +P +VA NA++ G+ + G EAF+ R G + Y+SLI F
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 166 NTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR--- 222
+ +L+A +L+ ++P + + LI +K GK+ A ++ MP +
Sbjct: 315 RARRYTQAFELYANMLKKNIKPD----IILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 223 -DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKL 277
D +NA++ LEE + + E+ E + T T++I + +G E+ ++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 278 FNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL-----SAGNALI 332
F +++ G P + I G L + + + +++G +SL +GN
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK-MEVGRPASLFLRLSHSGNRSF 489
Query: 333 TMYAKCGVV--GYADMVFL--TMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDIL 388
+ G + Y D+ T D VS+N +I + G A++L + + +
Sbjct: 490 DTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLS 549
Query: 389 PDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEA-- 446
PD +T+ T+++ G +E F + + +P Y L+ CR K A
Sbjct: 550 PDSVTYNTLINGLHRVGREEEAFKLFYAK-DDFRHSPA--VYRSLMTWSCRKRKVLVAFN 606
Query: 447 ------KKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQD----GTY 496
KK++ + E + I + C G E +A RL EL +D G Y
Sbjct: 607 LWMKYLKKIS-CLDDETANEIEQ-----CFKEGETE---RALRRLIELDTRKDELTLGPY 657
Query: 497 IILSNMYAHLGKWDEVARVRKLMRERGVKKEPG---------CSWIEIENMVHVFL 543
I G++ E V ++RE+ + P C +++ + VFL
Sbjct: 658 TIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL 713
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 70/341 (20%)
Query: 124 AMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
+IS Y + G+ E+A ++F +M + D +TY +LR
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYN--------------------VILRV 171
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEA 243
+++ F+L+ A+ KC + P +L ++ ++ G R +A
Sbjct: 172 MMREEVFFMLAF--AVYNEMLKC----------NCSP--NLYTFGILMDGLYKKGRTSDA 217
Query: 244 KFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKA 299
+ +F ++ R N +T+T++ISGL + G +++ KLF +M++ G P A+ +
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 300 CGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSW 359
LG + + L+ ++ K G V + +
Sbjct: 278 FCKLGRMVEAFE-------------------LLRLFEKDGFV------------LGLRGY 306
Query: 360 NAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCT 419
+++I L + R QA +LY MLK++I PD I + ++ S AG +++ SM +
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 420 HYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAP 460
G++P Y +I LC G E + + M S P
Sbjct: 367 K-GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFP 406
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 178/394 (45%), Gaps = 29/394 (7%)
Query: 49 LNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASAR 108
TL+ C+ CA +L S + KL E + ++ +++ G+ + A
Sbjct: 117 FTTLIDCFCRCARLSLALS--CLGKMMKLGFEPSI-----VTFGSLVNGFCHVNRFYEAM 169
Query: 109 KLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISAS 164
L+D + P V +N +I G A D + M MGI+ D TY SLI+
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 165 FNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR-- 222
F++G + ++ + ++R + P + +ALI Y K G+L++A++ +++M R
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPD----VITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 223 --DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLK 276
++V++N++++G L+EAK + + + N +T+ +I+G ++ ++ +K
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
Query: 277 LFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYA 336
+ M +G++ + Y + G +++ +++ G + N L+
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
Query: 337 KCGVVGYADMVFL-----TMPYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDR 391
G +G A +V L + V +++N +I L + + A L+ + + + PD
Sbjct: 406 DHGKIGKA-LVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464
Query: 392 ITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTP 425
IT++T++ L +E + M G+ P
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 172/420 (40%), Gaps = 69/420 (16%)
Query: 115 THPIA--VAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNC 172
+HP+ V ++ ++ + YE FR + +GI D Y++T+LI
Sbjct: 73 SHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDC--------- 123
Query: 173 GRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM------PVRDLVS 226
+ +C +L A KM P +V+
Sbjct: 124 ------------------------------FCRCARLSLALSCLGKMMKLGFEP--SIVT 151
Query: 227 WNAILSGYINARRLEEAKFIFREVP----ERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
+ ++++G+ + R EA + ++ E N++ + +I L E G +L + MK
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 283 SEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV- 341
G+ P Y I G+ +I S ++++G + +ALI +Y K G +
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 342 ----GYADMVFLTM-PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLT 396
Y +M+ ++ P + V++N++I L HG +A ++ ++ + P+ +T+ T
Sbjct: 272 EAKKQYNEMIQRSVNPNI--VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 397 ILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM--- 453
+++ A V +G M + G+ Y L C+AGKFS A+KV M
Sbjct: 330 LINGYCKAKRVDDGMKILCVM-SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 454 PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDGTYIILSNMYAH-LGKWDEV 512
P + LL G HG I +A RL +L + II N+ L K D+V
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIG---KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 242/564 (42%), Gaps = 110/564 (19%)
Query: 90 SWTTMIAGYVRNDDLASAR----KLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM 145
++T ++ G + DL+SA ++L+ P V +++MI+GYV+ G+ EEA RKM
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 146 HSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVL----RTVVQPSEHFILSVNNALIT 201
+ + +TY ++I GLF G++ A L R + ++IL +AL+
Sbjct: 426 EDQNVVPNGFTYGTVID-----GLFKAGKEEMAIELSKEMRLIGVEENNYIL---DALVN 477
Query: 202 FYTKCGKLVQAREVFDKMPVR--------------------------------------- 222
+ G++ + + + M +
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW 537
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLF 278
D+VS+N ++SG + ++ A + ++ + E+ ++ T+ +M++ + G E LKL+
Sbjct: 538 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 279 NQMKSEGLEPCDYAYAGAIKACGVL-------GSLDNGQQIHSQVIQLGHDSSLSAGNAL 331
++MKS G++P ++ +C ++ G ++ I +Q++ + +L+
Sbjct: 597 DKMKSCGIKP-------SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 332 ITMYAKCGVVGYADMVFLT----MPYVDSVS---WNAMIAALAQHGRGVQAIQLYEQMLK 384
+ +K AD +F T + Y +S +N +IA L + G +A + M
Sbjct: 650 LDTSSKHK---RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHY-----GMTPGEDHYARLIDLLCR 439
+PD +TF +++ H V G H ++ T+ G++P Y +I L
Sbjct: 707 RGFIPDTVTFNSLM----HGYFV--GSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSD 760
Query: 440 AGKFSEAKKVTESMP---FEPSAPIWESLLAGCRIHGNIELGIQA-AERLFELTPEQDGT 495
AG E K M P + +L++G GN++ + E + + + T
Sbjct: 761 AGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST 820
Query: 496 YIILSNMYAHLGKWDEVARVRKLMRERGVKKEPGCSWIEIENMVHVFLVDDAVHPEVHAV 555
Y +L + +A++GK + + K M +RGV I + + HP+V
Sbjct: 821 YNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL-----CTHPDVEWN 875
Query: 556 YK--YLEQ---LVIEM-RKLGYIP 573
K YL + L+ EM + GYIP
Sbjct: 876 KKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 212/497 (42%), Gaps = 74/497 (14%)
Query: 9 DPFSFSTVLGAMSL--IAEEEWHCQQLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVE 66
D +++TV+ + +A+E + Q ++VK G++ NTL+ + C V
Sbjct: 160 DTVTYNTVISGLCEHGLADEAY---QFLSEMVKMGILPDTVSYNTLIDGF--CKVGNFVR 214
Query: 67 SPVLMASARKLFDEAPLSQKDEPSWTTMIAGYVRNDDLASA-RKLLDGMTHPIAVAWNAM 125
A+ L DE +S+ + + T +++ Y + A R ++ P V ++++
Sbjct: 215 -------AKALVDE--ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265
Query: 126 ISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA-YVLRTV 184
I+ + G E R+M M + + TYT+L+ + F ++ L++ V+R +
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 185 VQPSEHFILSVNNALITFYTKCGKLVQAREVFDKM----PVRDLVSWNAILSGYINARRL 240
P + L V L+ K G L +A + F + V ++V++ A++ G A L
Sbjct: 326 --PVD---LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL 380
Query: 241 EEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGA 296
A+FI ++ E+ N++T++ MI+G + G EE++ L +M+ + + P + Y
Sbjct: 381 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTV 440
Query: 297 I----------------KACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGV 340
I K ++G +N + + V L + L+ GV
Sbjct: 441 IDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
Query: 341 ----VGYADM--VFLT------------------MPYVDSVSWNAMIAALAQHGRGVQAI 376
+ Y + VF MP+ D VS+N +I+ + + G+ V A
Sbjct: 501 TLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW-DVVSYNVLISGMLKFGK-VGAD 558
Query: 377 QLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDL 436
Y+ M ++ I PD TF ++++ G + +D M G+ P ++ +
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGM 617
Query: 437 LCRAGKFSEAKKVTESM 453
LC GK EA + M
Sbjct: 618 LCENGKMEEAIHILNQM 634
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 189/461 (40%), Gaps = 70/461 (15%)
Query: 119 AVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHA 178
V +N +ISG HGL +EA+ +M MGI D +Y +LI G F + L
Sbjct: 161 TVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL-- 218
Query: 179 YVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGY 234
V + SE +++ L ++Y L E + M + D+V++++I++
Sbjct: 219 -----VDEISELNLITHTILLSSYYN----LHAIEEAYRDMVMSGFDPDVVTFSSIINRL 269
Query: 235 INARRLEEAKFIFREVPER----NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCD 290
++ E + RE+ E N +T+T ++ L ++ +L L++QM G+ P D
Sbjct: 270 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI-PVD 328
Query: 291 Y-AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFL 349
Y + G L ++ +++ ++ AL+ K G + A+ +
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 350 TM------PYVDSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSH 403
M P V V++++MI + G +A+ L +M ++++P+ T+ T++
Sbjct: 389 QMLEKSVIPNV--VTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446
Query: 404 AGL---------------VKEGQHYFDSMCTHY-------------------GMTPGEDH 429
AG V+E + D++ H G+T + +
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506
Query: 430 YARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELT 489
Y LID+ + G A E M E P W+ + I G ++ G A+ ++
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQ-ERGMP-WDVVSYNVLISGMLKFGKVGADWAYKGM 564
Query: 490 PEQD-----GTYIILSNMYAHLGKWDEVARVRKLMRERGVK 525
E+ T+ I+ N G + + ++ M+ G+K
Sbjct: 565 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 134/335 (40%), Gaps = 51/335 (15%)
Query: 85 QKDEPSWTTMIAGYVRNDDLASARKLLDGMT----HPIAVAWNAMISGYVRHGLYEEAFD 140
+ D ++ M+ + D KL D M P ++ N ++ +G EEA
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 141 TFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALI 200
+M M I + TY + S + + H +L ++ S V N LI
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ----VYNTLI 685
Query: 201 TFYTKCGKLVQAREVFDKMPVR----DLVSWNAILSGYINARRLEEAKFIFREVPER--- 253
K G +A V M R D V++N+++ GY + +A + + E
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 254 -NLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQI 312
N+ T+ +I GL+++G +E K ++MKS G+ P D+ Y I +G++ I
Sbjct: 746 PNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
Query: 313 HSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRG 372
+ ++I G S N LI+ +A G+
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANV-------------------------------GKM 834
Query: 373 VQAIQLYEQMLKEDILPDRITFLTILSA----CSH 403
+QA +L ++M K + P+ T+ T++S C+H
Sbjct: 835 LQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 869
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 31/191 (16%)
Query: 307 DNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYA-DMVFLTMPYVDSVSWNAMIAA 365
D I+S++I G + A N LI + K G + +A ++ + +D+V++N +I+
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISG 170
Query: 366 LAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFD-----SMCTH 420
L +HG +A Q +M+K ILPD +++ T++ G + D ++ TH
Sbjct: 171 LCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITH 230
Query: 421 Y----------------------GMTPGEDHYARLIDLLCRAGKFSEAK---KVTESMPF 455
G P ++ +I+ LC+ GK E + E M
Sbjct: 231 TILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV 290
Query: 456 EPSAPIWESLL 466
P+ + +L+
Sbjct: 291 YPNHVTYTTLV 301
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 32 QLHCDVVKWGVMCVPSVLNTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSW 91
+ H ++ +G+ V NTL++ C ++ ++M EA D ++
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIAT--LCKLGMTKKAAMVMGDM-----EARGFIPDTVTF 716
Query: 92 TTMIAGY-----VRNDDLASARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKMH 146
+++ GY VR L++ +++ P +N +I G GL +E +M
Sbjct: 717 NSLMHGYFVGSHVRKA-LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 147 SMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKC 206
S G++ D++TY +LIS G ++ ++ + P S N LI+ +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT----STYNVLISEFANV 831
Query: 207 GKLVQAREVFDKMPVR 222
GK++QARE+ +M R
Sbjct: 832 GKMLQARELLKEMGKR 847
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 170/403 (42%), Gaps = 24/403 (5%)
Query: 70 LMASARKLFDEAPLSQ--KDEPSWTTMIAGYVRNDDLASARKLLDGMTHPIAVAWNA--- 124
L+ A +FDE + D S+ M+ G R+ + A + L GM + NA
Sbjct: 197 LIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCT 256
Query: 125 -MISGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRT 183
+++ +GL A FRKM +G + + +TSLI G ++ ++R
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 184 VVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLV-----SWNAILSGYINAR 238
+P+ + + ALI K G +A +F K+ D ++ +++ GY
Sbjct: 317 GWKPNVY----THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 239 RLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYA 294
+L A+ +F + E+ L T+T +I+G ++G + +L N M EG P Y Y
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 295 GAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYV 354
AI + ++ ++ G ++ LI K + A F M
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 355 ----DSVSWNAMIAALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEG 410
D N +IAA + + ++ +L++ ++ ++P + T+ +++S G +
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 411 QHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFSEAKKVTESM 453
YF +M H G P Y LI LC+ EA K+ E+M
Sbjct: 553 LKYFHNMKRH-GCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 42/359 (11%)
Query: 74 ARKLFDEAPLSQKDEP---SWTTMIAGYVRNDDLASARKLLDGMTH----PIAVAWNAMI 126
A +LF + S +P ++T+MI GY + D L A L M P + +I
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 127 SGYVRHGLYEEAFDTFRKMHSMGIQMDEYTYTSLISA-----------SFNTGLFNCGRQ 175
+G+ + G + A++ M G + YTY + I + F+CG +
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 176 LHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYI 235
++Q E + N + F+ + K F+ D+ N +++ +
Sbjct: 461 ADGVTYTILIQ--EQCKQNDINQALAFFCRMNK-----TGFEA----DMRLNNILIAAFC 509
Query: 236 NARRLEEAKFIFREVPERNLL----TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDY 291
++++E++ +F+ V L+ T+T MIS + G + +LK F+ MK G P +
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 569
Query: 292 AYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTM 351
Y I +D +++ +I G S + Y C A+ + L
Sbjct: 570 TYGSLISGLCKKSMVDEACKLYEAMIDRGL--SPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 352 PYVDSVSWNAMIAAL-----AQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAG 405
P +D W + L ++ GV A+ ++++L++D DR+T +ACS +G
Sbjct: 628 P-LDKKLWIRTVRTLVRKLCSEKKVGVAAL-FFQKLLEKDSSADRVTLAAFTTACSESG 684
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 14/263 (5%)
Query: 197 NALITFYTKCGKLVQAREVFDKMPVRDLV----SWNAILSGYINARRLEEAKFIFREVPE 252
N ++ + G + A VFD+M VR +V S+ ++ G +++EA + +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 253 RNLL----TWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDN 308
R + T T++++ L E+G ++ F +M G +P + I GS+
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 309 GQQIHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSV-----SWNAMI 363
++ ++++ G ++ ALI K G A +FL + D+ ++ +MI
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 364 AALAQHGRGVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGM 423
+ + +A L+ +M ++ + P+ T+ T+++ AG + M G
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE-GF 424
Query: 424 TPGEDHYARLIDLLCRAGKFSEA 446
P Y ID LC+ + EA
Sbjct: 425 MPNIYTYNAAIDSLCKKSRAPEA 447
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 329 NALITMYAKCGVVGYADMVFLTMPYV----DSVSWNAMIAALAQHGRGVQAIQLYEQMLK 384
N ++ + + G++ YA+ VF M DS S+ M+ + G+ +A + M++
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 385 EDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYARLIDLLCRAGKFS 444
+PD T IL+A GLV YF M G P ++ LID LC+ G
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKM-IDLGFKPNLINFTSLIDGLCKKGSIK 304
Query: 445 EAKKVTESM---PFEPSAPIWESLLAGCRIHGNIELGIQAAERLFELTPEQDG------T 495
+A ++ E M ++P+ +L+ G G E A RLF D T
Sbjct: 305 QAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE----KAFRLFLKLVRSDTYKPNVHT 360
Query: 496 YIILSNMYAHLGKWDEVARVRKLMRERGV 524
Y + Y K + + M+E+G+
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 183/409 (44%), Gaps = 33/409 (8%)
Query: 42 VMCVPSVL---NTLLSCYICCASSTLVESPVLMASARKLFDEAPLSQKDEPSWTTMIAGY 98
++ +P +L N ++ C C SS + + KL E D ++T+++ GY
Sbjct: 111 ILGIPPLLCTCNIVMHCV--CLSSQPCRASCFLGKMMKLGFEP-----DLVTFTSLLNGY 163
Query: 99 VRNDDLASARKLLD---GMT-HPIAVAWNAMISGYVRHGLYEEAFDTFRKMHSMGIQMDE 154
+ + A L D GM P V + +I ++ A + F +M + G + +
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 155 YTYTSLISASFNTGLFNCGR-QLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAR 213
TY +L+ TGL GR A++LR +++ + ALI + K GKL++A+
Sbjct: 224 VTYNALV-----TGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 214 EVFDKM----PVRDLVSWNAILSGYINARRLEEAKFIF----REVPERNLLTWTVMISGL 265
E+++ M D+ ++ ++++G L+EA+ +F R N + +T +I G
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 266 AESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQLGHDSSL 325
+S E+ +K+F +M +G+ Y I+ ++G D Q++ +Q+ +
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 326 SAGNALITMYAKCGVVGYADMVFLTMPY----VDSVSWNAMIAALAQHGRGVQAIQLYEQ 381
N L+ G V A M+F M ++ V++ +I + + G+ A L+
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 382 MLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHY 430
+ + + P+ IT+ T++S GL+ E F M G P E Y
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM-KEDGFLPNESVY 506
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 46/280 (16%)
Query: 252 ERNLLTWTVMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQ 311
E +L+T+T +++G E+++ LF+Q+ G +P Y I+ L++ +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 312 IHSQVIQLGHDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGR 371
+ +Q +G + S + V++NA++ L + GR
Sbjct: 210 LFNQ---MGTNGSRP----------------------------NVVTYNALVTGLCEIGR 238
Query: 372 GVQAIQLYEQMLKEDILPDRITFLTILSACSHAGLVKEGQHYFDSMCTHYGMTPGEDHYA 431
A L M+K I P+ ITF ++ A G + E + ++ M + P Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM-IQMSVYPDVFTYG 297
Query: 432 RLIDLLCRAGKFSEAKK---VTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAERLFEL 488
LI+ LC G EA++ + E P+ I+ +L+ G +E G++ +E+
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI---FYEM 354
Query: 489 TPEQDG------TYIILSNMYAHLGKWDEVARVRKLMRER 522
+ Q G TY +L Y +G+ D V M R
Sbjct: 355 S--QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 64/365 (17%)
Query: 140 DTFRKMHSMGIQMDEYTYTSLISASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNAL 199
D R M S+ + +E Y+ L S +L +++++ ++P+ FI N L
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFI----NRL 129
Query: 200 ITFYTKCGKLVQAREVFDKMPVRDLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWT 259
+ + CG+L R++FD+MP RD SW + G I E+A F+F
Sbjct: 130 LLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLF------------ 177
Query: 260 VMISGLAESGFGEESLKLFNQMKSEGLEPCDYAYAGAIKACGVLGSLDNGQQIHSQVIQL 319
+S L S G + + +KAC ++ + G+Q+H+ +L
Sbjct: 178 --VSMLKHSQKG-------------AFKIPSWILGCVLKACAMIRDFELGKQVHALCHKL 222
Query: 320 G----HDSSLSAGNALITMYAKCGVVGYADMVFLTMPYVDSVSWNAMIAALAQHGRGVQA 375
G DS LS +LI Y + + A++V + ++V+W A + + G +
Sbjct: 223 GFIDEEDSYLSG--SLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEV 280
Query: 376 IQLYEQMLKEDILPDRITFLTILSACS------------HAGLVKEGQHYFDSMCTHYGM 423
I+ + +M I + F +L ACS HA +K G F+S C
Sbjct: 281 IRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLG---FESDCL---- 333
Query: 424 TPGEDHYARLIDLLCRAGKFSEAKKVTESMPFEPSAPIWESLLAGCRIHGNIELGIQAAE 483
RLI++ + GK +A+KV +S E S W +++A +G + I+A +
Sbjct: 334 -----IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG---IYIEAIK 385
Query: 484 RLFEL 488
L+++
Sbjct: 386 LLYQM 390
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 107 ARKLLDGMTHPIAVAWNAMISGYVRHGLYEEAFDTFRKM--HSM--GIQMDEYTYTSLIS 162
R++ D M H +W + G + G YE+A F M HS ++ + ++
Sbjct: 142 TRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLK 201
Query: 163 ASFNTGLFNCGRQLHAYVLRTVVQPSEHFILSVNNALITFYTKCGKLVQAREVFDKMPVR 222
A F G+Q+HA + E LS +LI FY +
Sbjct: 202 ACAMIRDFELGKQVHALCHKLGFIDEEDSYLS--GSLIRFYGE----------------- 242
Query: 223 DLVSWNAILSGYINARRLEEAKFIFREVPERNLLTWTVMISGLAESGFGEESLKLFNQMK 282
R LE+A + ++ N + W ++ G +E ++ F +M
Sbjct: 243 --------------FRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMG 288
Query: 283 SEGLEPCDYAYAGAIKACG-VLGSLDNGQQIHSQVIQLGHDSSLSAGNALITMYAKCGVV 341
+ G++ ++ +KAC V +GQQ+H+ I+LG +S LI MY K G V
Sbjct: 289 NHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKV 348
Query: 342 GYADMVFLTMPYVDSVS-WNAMIAALAQHGRGVQAIQLYEQM 382
A+ VF + SVS WNAM+A+ Q+G ++AI+L QM
Sbjct: 349 KDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM 390