Miyakogusa Predicted Gene
- Lj6g3v0056740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0056740.1 Non Chatacterized Hit- tr|I1NEQ2|I1NEQ2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.74,0,no
description,TRAF-type; TRAF domain-like,TRAF-like; coiled-coil,NULL;
seg,NULL; MATH,MATH; meprin ,CUFF.57446.1
(480 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04300.1 | Symbols: | TRAF-like superfamily protein | chr1:1... 590 e-169
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1... 582 e-166
AT5G43560.2 | Symbols: | TRAF-like superfamily protein | chr5:1... 580 e-166
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:1... 580 e-166
AT1G04300.4 | Symbols: | TRAF-like superfamily protein | chr1:1... 560 e-160
AT1G04300.2 | Symbols: | TRAF-like superfamily protein | chr1:1... 432 e-121
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 427 e-120
AT5G52330.2 | Symbols: | TRAF-like superfamily protein | chr5:2... 373 e-103
AT4G16045.1 | Symbols: | TRAF-like superfamily protein | chr4:9... 208 5e-54
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 108 1e-23
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 107 1e-23
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 107 1e-23
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 105 6e-23
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 105 6e-23
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:215626... 87 3e-17
AT3G58250.1 | Symbols: | TRAF-like family protein | chr3:215707... 78 1e-14
AT2G42460.1 | Symbols: | TRAF-like family protein | chr2:176763... 75 1e-13
AT2G42460.2 | Symbols: | TRAF-like family protein | chr2:176780... 74 2e-13
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:107819... 74 3e-13
AT3G58360.1 | Symbols: | TRAF-like family protein | chr3:215935... 72 6e-13
AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein... 70 3e-12
AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein... 70 3e-12
AT1G69650.1 | Symbols: | TRAF-like family protein | chr1:261974... 70 4e-12
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:215646... 69 6e-12
AT3G58220.1 | Symbols: | TRAF-like family protein | chr3:215651... 69 9e-12
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:107889... 69 9e-12
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:198390... 68 1e-11
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:112452... 67 2e-11
AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 67 2e-11
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:216048... 67 4e-11
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2... 66 4e-11
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:112431... 66 6e-11
AT2G42480.1 | Symbols: | TRAF-like family protein | chr2:176858... 65 9e-11
AT3G58260.1 | Symbols: | TRAF-like family protein | chr3:215737... 65 1e-10
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:163287... 62 9e-10
AT3G17380.1 | Symbols: | TRAF-like family protein | chr3:595024... 61 2e-09
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:215890... 60 5e-09
AT1G69660.1 | Symbols: | TRAF-like family protein | chr1:261996... 60 5e-09
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 58 1e-08
AT3G58200.1 | Symbols: | TRAF-like family protein | chr3:215600... 56 5e-08
AT3G58440.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 56 7e-08
AT3G58290.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 55 1e-07
AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:341322... 54 3e-07
AT3G22080.1 | Symbols: | TRAF-like family protein | chr3:777781... 53 4e-07
AT2G42470.1 | Symbols: | TRAF-like family protein | chr2:176798... 53 5e-07
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 52 1e-06
AT2G32870.1 | Symbols: | TRAF-like family protein | chr2:139449... 50 3e-06
>AT1G04300.1 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1074
Length = 1074
Score = 590 bits (1520), Expect = e-169, Method: Compositional matrix adjust.
Identities = 301/478 (62%), Positives = 352/478 (73%), Gaps = 1/478 (0%)
Query: 1 MAGTASEESGVGKSVEGIFNGQRCQSGEALAEWRSSEQVENGXXXXXXXX-XXXXXXXXX 59
MA E+SGVG+S+E NGQ Q+GEAL+EWRSS QVENG
Sbjct: 1 MAEAVDEDSGVGRSLEESSNGQHSQAGEALSEWRSSGQVENGTPSTSPSYWDIDDDDDYG 60
Query: 60 XXXXELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVAN 119
ELYG+YTWKI FS+I KRE RS+ FE G YKWYILIYPQGCDVCNHLSLFLCVAN
Sbjct: 61 LKPSELYGQYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVAN 120
Query: 120 HDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDS 179
+DKLLPGWS FAQFTI+V+++D KKSK+SDTLHRFWKKEHDWGWKKFMEL K+ DGF+D
Sbjct: 121 YDKLLPGWSQFAQFTISVLSQDLKKSKFSDTLHRFWKKEHDWGWKKFMELPKLKDGFIDE 180
Query: 180 SDNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRSKLGKLIE 239
S L I+A+VQVIRE+ DRPFRCLDC YRRELVRVY NVEQICRRFVEE+RSKLG+LIE
Sbjct: 181 SGCLTIEAKVQVIRERVDRPFRCLDCGYRRELVRVYFQNVEQICRRFVEEKRSKLGRLIE 240
Query: 240 DKAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMDSLYSGLKA 299
DKA+W+SF FW +DQ++RRRM RE++DVILK VVKHFF+EKEV+STLVMDSLYSGLKA
Sbjct: 241 DKARWTSFGVFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEKEVSSTLVMDSLYSGLKA 300
Query: 300 LESQSNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLPPKDEKGPQN 359
LE Q+ K R +LLDA+++PA IV +KDMF ERA +EPLPPKDEKG QN
Sbjct: 301 LEGQTKNMKARSRLLDAKQLPAPIVSVDKDMFVLVDDVLLLLERAALEPLPPKDEKGRQN 360
Query: 360 RTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAVALKRQEEL 419
RTKDGN GE+ NK++ IF+L+HIFS KIEV++QEA+ALKRQEEL
Sbjct: 361 RTKDGNDGEEVNKEADERDERRLTELGRRTVEIFILSHIFSTKIEVAHQEAIALKRQEEL 420
Query: 420 IREEEAAWLAESEQKAKRGVXXXXXXXXXXXXXXXXXXXXGKDKGREERPAVAVLDKE 477
IREEE AWLAE+EQ+AKRG GKDK +EE+ + A K+
Sbjct: 421 IREEEEAWLAETEQRAKRGAAEREKKSKKKQAKQKRNKNKGKDKRKEEKVSFATHAKD 478
>AT1G04300.3 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1082
Length = 1082
Score = 582 bits (1501), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/486 (61%), Positives = 352/486 (72%), Gaps = 9/486 (1%)
Query: 1 MAGTASEESGVGKSVEGIFNGQRCQSGEALAEWRSSEQVENGXXXXXXXX-XXXXXXXXX 59
MA E+SGVG+S+E NGQ Q+GEAL+EWRSS QVENG
Sbjct: 1 MAEAVDEDSGVGRSLEESSNGQHSQAGEALSEWRSSGQVENGTPSTSPSYWDIDDDDDYG 60
Query: 60 XXXXELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVAN 119
ELYG+YTWKI FS+I KRE RS+ FE G YKWYILIYPQGCDVCNHLSLFLCVAN
Sbjct: 61 LKPSELYGQYTWKIPKFSEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVAN 120
Query: 120 HDKLLPG--------WSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSK 171
+DKLLPG WS FAQFTI+V+++D KKSK+SDTLHRFWKKEHDWGWKKFMEL K
Sbjct: 121 YDKLLPGSFAILEAGWSQFAQFTISVLSQDLKKSKFSDTLHRFWKKEHDWGWKKFMELPK 180
Query: 172 VYDGFVDSSDNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERR 231
+ DGF+D S L I+A+VQVIRE+ DRPFRCLDC YRRELVRVY NVEQICRRFVEE+R
Sbjct: 181 LKDGFIDESGCLTIEAKVQVIRERVDRPFRCLDCGYRRELVRVYFQNVEQICRRFVEEKR 240
Query: 232 SKLGKLIEDKAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMD 291
SKLG+LIEDKA+W+SF FW +DQ++RRRM RE++DVILK VVKHFF+EKEV+STLVMD
Sbjct: 241 SKLGRLIEDKARWTSFGVFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEKEVSSTLVMD 300
Query: 292 SLYSGLKALESQSNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLPP 351
SLYSGLKALE Q+ K R +LLDA+++PA IV +KDMF ERA +EPLPP
Sbjct: 301 SLYSGLKALEGQTKNMKARSRLLDAKQLPAPIVSVDKDMFVLVDDVLLLLERAALEPLPP 360
Query: 352 KDEKGPQNRTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAV 411
KDEKG QNRTKDGN GE+ NK++ IF+L+HIFS KIEV++QEA+
Sbjct: 361 KDEKGRQNRTKDGNDGEEVNKEADERDERRLTELGRRTVEIFILSHIFSTKIEVAHQEAI 420
Query: 412 ALKRQEELIREEEAAWLAESEQKAKRGVXXXXXXXXXXXXXXXXXXXXGKDKGREERPAV 471
ALKRQEELIREEE AWLAE+EQ+AKRG GKDK +EE+ +
Sbjct: 421 ALKRQEELIREEEEAWLAETEQRAKRGAAEREKKSKKKQAKQKRNKNKGKDKRKEEKVSF 480
Query: 472 AVLDKE 477
A K+
Sbjct: 481 ATHAKD 486
>AT5G43560.2 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 580 bits (1494), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/440 (67%), Positives = 340/440 (77%), Gaps = 2/440 (0%)
Query: 1 MAGTASEESGVGKS-VEGIFNGQRCQSGEALAEWRSSEQVENGXXXXXXXX-XXXXXXXX 58
M+ + +E+SG G+S +E NGQR QS EA+AEWRSSEQVENG
Sbjct: 1 MSESTNEDSGAGRSSLEENSNGQRSQSEEAIAEWRSSEQVENGTPSTSPPYWDIDDDDDF 60
Query: 59 XXXXXELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVA 118
+L+GK TW IE FS INKRELR FEVG YKWYILIYPQGCDVCNHLSLFLCVA
Sbjct: 61 GSKPSQLFGKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVA 120
Query: 119 NHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVD 178
+H+KLLPGWSHFAQFTIAV NKDPKKSK+SDTLHRFWKKEHDWGWKKF+EL K+ +GF+D
Sbjct: 121 HHEKLLPGWSHFAQFTIAVSNKDPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKEGFID 180
Query: 179 SSDNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRSKLGKLI 238
S L IKAQVQVIRE+ DRPFRCL +YR ELVRVYL NVEQIC RFVEE+RSKLG+LI
Sbjct: 181 DSGCLTIKAQVQVIRERVDRPFRCLHYKYREELVRVYLGNVEQICWRFVEEKRSKLGRLI 240
Query: 239 EDKAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMDSLYSGLK 298
EDKAKW SFC FW +DQ++RRRMSRE+MDVILK+VVKHFF+EKEVTSTLVMDSLYSGLK
Sbjct: 241 EDKAKWKSFCAFWMGLDQNSRRRMSREKMDVILKIVVKHFFVEKEVTSTLVMDSLYSGLK 300
Query: 299 ALESQSNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLPPKDEKGPQ 358
ALE Q+ K++R +L+D EE A IV +KD F E+A +EPLP K+EK Q
Sbjct: 301 ALEGQNKNKESRPRLMDTEESTAPIVSVDKDSFALVDDVLLLLEKAALEPLPKKEEKSSQ 360
Query: 359 NRTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAVALKRQEE 418
NRTKDGN+GE+F+++++ IFVLAHIFSNKIEV+YQEA+A KRQEE
Sbjct: 361 NRTKDGNAGEEFSREAVERDDRRLTELGRRTVEIFVLAHIFSNKIEVAYQEAIAWKRQEE 420
Query: 419 LIREEEAAWLAESEQKAKRG 438
LIREEE AWLAESEQK KRG
Sbjct: 421 LIREEEEAWLAESEQKGKRG 440
>AT5G43560.1 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 580 bits (1494), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/440 (67%), Positives = 340/440 (77%), Gaps = 2/440 (0%)
Query: 1 MAGTASEESGVGKS-VEGIFNGQRCQSGEALAEWRSSEQVENGXXXXXXXX-XXXXXXXX 58
M+ + +E+SG G+S +E NGQR QS EA+AEWRSSEQVENG
Sbjct: 1 MSESTNEDSGAGRSSLEENSNGQRSQSEEAIAEWRSSEQVENGTPSTSPPYWDIDDDDDF 60
Query: 59 XXXXXELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVA 118
+L+GK TW IE FS INKRELR FEVG YKWYILIYPQGCDVCNHLSLFLCVA
Sbjct: 61 GSKPSQLFGKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVA 120
Query: 119 NHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVD 178
+H+KLLPGWSHFAQFTIAV NKDPKKSK+SDTLHRFWKKEHDWGWKKF+EL K+ +GF+D
Sbjct: 121 HHEKLLPGWSHFAQFTIAVSNKDPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKEGFID 180
Query: 179 SSDNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRSKLGKLI 238
S L IKAQVQVIRE+ DRPFRCL +YR ELVRVYL NVEQIC RFVEE+RSKLG+LI
Sbjct: 181 DSGCLTIKAQVQVIRERVDRPFRCLHYKYREELVRVYLGNVEQICWRFVEEKRSKLGRLI 240
Query: 239 EDKAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMDSLYSGLK 298
EDKAKW SFC FW +DQ++RRRMSRE+MDVILK+VVKHFF+EKEVTSTLVMDSLYSGLK
Sbjct: 241 EDKAKWKSFCAFWMGLDQNSRRRMSREKMDVILKIVVKHFFVEKEVTSTLVMDSLYSGLK 300
Query: 299 ALESQSNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLPPKDEKGPQ 358
ALE Q+ K++R +L+D EE A IV +KD F E+A +EPLP K+EK Q
Sbjct: 301 ALEGQNKNKESRPRLMDTEESTAPIVSVDKDSFALVDDVLLLLEKAALEPLPKKEEKSSQ 360
Query: 359 NRTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAVALKRQEE 418
NRTKDGN+GE+F+++++ IFVLAHIFSNKIEV+YQEA+A KRQEE
Sbjct: 361 NRTKDGNAGEEFSREAVERDDRRLTELGRRTVEIFVLAHIFSNKIEVAYQEAIAWKRQEE 420
Query: 419 LIREEEAAWLAESEQKAKRG 438
LIREEE AWLAESEQK KRG
Sbjct: 421 LIREEEEAWLAESEQKGKRG 440
>AT1G04300.4 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1055
Length = 1055
Score = 560 bits (1444), Expect = e-160, Method: Compositional matrix adjust.
Identities = 290/477 (60%), Positives = 343/477 (71%), Gaps = 18/477 (3%)
Query: 1 MAGTASEESGVGKSVEGIFNGQRCQSGEALAEWRSSEQVENGXXXXXXXXXXXXXXXXXX 60
MA E+SGVG+S+E NGQ Q+GEAL+EWRSS QVENG
Sbjct: 1 MAEAVDEDSGVGRSLEESSNGQHSQAGEALSEWRSSGQVENGTPSTSPSY---------- 50
Query: 61 XXXELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANH 120
+ ++ +I KRE RS+ FE G YKWYILIYPQGCDVCNHLSLFLCVAN+
Sbjct: 51 --------WDIDDDDDYEITKREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANY 102
Query: 121 DKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSS 180
DKLLPGWS FAQFTI+V+++D KKSK+SDTLHRFWKKEHDWGWKKFMEL K+ DGF+D S
Sbjct: 103 DKLLPGWSQFAQFTISVLSQDLKKSKFSDTLHRFWKKEHDWGWKKFMELPKLKDGFIDES 162
Query: 181 DNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRSKLGKLIED 240
L I+A+VQVIRE+ DRPFRCLDC YRRELVRVY NVEQICRRFVEE+RSKLG+LIED
Sbjct: 163 GCLTIEAKVQVIRERVDRPFRCLDCGYRRELVRVYFQNVEQICRRFVEEKRSKLGRLIED 222
Query: 241 KAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMDSLYSGLKAL 300
KA+W+SF FW +DQ++RRRM RE++DVILK VVKHFF+EKEV+STLVMDSLYSGLKAL
Sbjct: 223 KARWTSFGVFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEKEVSSTLVMDSLYSGLKAL 282
Query: 301 ESQSNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLPPKDEKGPQNR 360
E Q+ K R +LLDA+++PA IV +KDMF ERA +EPLPPKDEKG QNR
Sbjct: 283 EGQTKNMKARSRLLDAKQLPAPIVSVDKDMFVLVDDVLLLLERAALEPLPPKDEKGRQNR 342
Query: 361 TKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAVALKRQEELI 420
TKDGN GE+ NK++ IF+L+HIFS KIEV++QEA+ALKRQEELI
Sbjct: 343 TKDGNDGEEVNKEADERDERRLTELGRRTVEIFILSHIFSTKIEVAHQEAIALKRQEELI 402
Query: 421 REEEAAWLAESEQKAKRGVXXXXXXXXXXXXXXXXXXXXGKDKGREERPAVAVLDKE 477
REEE AWLAE+EQ+AKRG GKDK +EE+ + A K+
Sbjct: 403 REEEEAWLAETEQRAKRGAAEREKKSKKKQAKQKRNKNKGKDKRKEEKVSFATHAKD 459
>AT1G04300.2 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153095 REVERSE LENGTH=997
Length = 997
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/352 (63%), Positives = 265/352 (75%)
Query: 126 GWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSDNLII 185
GWS FAQFTI+V+++D KKSK+SDTLHRFWKKEHDWGWKKFMEL K+ DGF+D S L I
Sbjct: 50 GWSQFAQFTISVLSQDLKKSKFSDTLHRFWKKEHDWGWKKFMELPKLKDGFIDESGCLTI 109
Query: 186 KAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRSKLGKLIEDKAKWS 245
+A+VQVIRE+ DRPFRCLDC YRRELVRVY NVEQICRRFVEE+RSKLG+LIEDKA+W+
Sbjct: 110 EAKVQVIRERVDRPFRCLDCGYRRELVRVYFQNVEQICRRFVEEKRSKLGRLIEDKARWT 169
Query: 246 SFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMDSLYSGLKALESQSN 305
SF FW +DQ++RRRM RE++DVILK VVKHFF+EKEV+STLVMDSLYSGLKALE Q+
Sbjct: 170 SFGVFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEKEVSSTLVMDSLYSGLKALEGQTK 229
Query: 306 CKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLPPKDEKGPQNRTKDGN 365
K R +LLDA+++PA IV +KDMF ERA +EPLPPKDEKG QNRTKDGN
Sbjct: 230 NMKARSRLLDAKQLPAPIVSVDKDMFVLVDDVLLLLERAALEPLPPKDEKGRQNRTKDGN 289
Query: 366 SGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAVALKRQEELIREEEA 425
GE+ NK++ IF+L+HIFS KIEV++QEA+ALKRQEELIREEE
Sbjct: 290 DGEEVNKEADERDERRLTELGRRTVEIFILSHIFSTKIEVAHQEAIALKRQEELIREEEE 349
Query: 426 AWLAESEQKAKRGVXXXXXXXXXXXXXXXXXXXXGKDKGREERPAVAVLDKE 477
AWLAE+EQ+AKRG GKDK +EE+ + A K+
Sbjct: 350 AWLAETEQRAKRGAAEREKKSKKKQAKQKRNKNKGKDKRKEEKVSFATHAKD 401
>AT5G52330.1 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249732 REVERSE LENGTH=397
Length = 397
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/360 (60%), Positives = 260/360 (72%), Gaps = 12/360 (3%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKL 123
ELYGK TWKI+ FSQI+KRE SS FE+G Y W+IL+YP+GCDV NHLSLFLCVANHD+L
Sbjct: 16 ELYGKNTWKIKKFSQISKREFASSVFEIGGYSWHILMYPEGCDVSNHLSLFLCVANHDEL 75
Query: 124 LPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSDNL 183
LPGWS AQFTI+V++KDPKKSK+SDTLHRFWKKEHDWGWKKFMEL K+ DGF+D S L
Sbjct: 76 LPGWSQLAQFTISVMHKDPKKSKFSDTLHRFWKKEHDWGWKKFMELPKLRDGFIDDSGCL 135
Query: 184 IIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRSKLGKLIEDKAK 243
I+ +VQVIR++ DRPF LD Y+ E+VRVY N+EQI RFVEERRSKL KLIEDKAK
Sbjct: 136 TIETKVQVIRDRVDRPF-FLDYGYKTEIVRVYFRNIEQIFLRFVEERRSKLEKLIEDKAK 194
Query: 244 WSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKEVTSTLVMDSLYSGLKALESQ 303
W+SF FW +D+++RR MSRE+MDVILK VKHFF+E VTS + MD LY+GLK LE Q
Sbjct: 195 WTSFGVFWLGMDKNSRREMSREKMDVILKGFVKHFFMENVVTSPIAMDCLYNGLKDLEVQ 254
Query: 304 SNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATI-------EPLPPKDEKG 356
+ KK KLLD +E+PA V+ ++DMF EPLPPKD+K
Sbjct: 255 TKNKKASPKLLDDKELPAPFVKVDRDMFVLVDDDVLLLLERAALLERAAPEPLPPKDDKA 314
Query: 357 PQNRTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSYQEAVALKRQ 416
QNR K+ ED NK++ IFVL HIFS KIEV+Y+EA+ALKRQ
Sbjct: 315 LQNRIKEDKDEEDINKEA---YEICLNEWGRRTVEIFVLDHIFS-KIEVAYKEAIALKRQ 370
>AT5G52330.2 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249288 REVERSE LENGTH=346
Length = 346
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 231/324 (71%), Gaps = 12/324 (3%)
Query: 100 IYPQGCDVCNHLSLFLCVANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEH 159
+YP+GCDV NHLSLFLCVANHD+LLPGWS AQFTI+V++KDPKKSK+SDTLHRFWKKEH
Sbjct: 1 MYPEGCDVSNHLSLFLCVANHDELLPGWSQLAQFTISVMHKDPKKSKFSDTLHRFWKKEH 60
Query: 160 DWGWKKFMELSKVYDGFVDSSDNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNV 219
DWGWKKFMEL K+ DGF+D S L I+ +VQVIR++ DRPF LD Y+ E+VRVY N+
Sbjct: 61 DWGWKKFMELPKLRDGFIDDSGCLTIETKVQVIRDRVDRPF-FLDYGYKTEIVRVYFRNI 119
Query: 220 EQICRRFVEERRSKLGKLIEDKAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFF 279
EQI RFVEERRSKL KLIEDKAKW+SF FW +D+++RR MSRE+MDVILK VKHFF
Sbjct: 120 EQIFLRFVEERRSKLEKLIEDKAKWTSFGVFWLGMDKNSRREMSREKMDVILKGFVKHFF 179
Query: 280 IEKEVTSTLVMDSLYSGLKALESQSNCKKNRVKLLDAEEMPATIVRAEKDMFXXXXXXXX 339
+E VTS + MD LY+GLK LE Q+ KK KLLD +E+PA V+ ++DMF
Sbjct: 180 MENVVTSPIAMDCLYNGLKDLEVQTKNKKASPKLLDDKELPAPFVKVDRDMFVLVDDDVL 239
Query: 340 XXERATI-------EPLPPKDEKGPQNRTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXI 392
EPLPPKD+K QNR K+ ED NK++ I
Sbjct: 240 LLLERAALLERAAPEPLPPKDDKALQNRIKEDKDEEDINKEA---YEICLNEWGRRTVEI 296
Query: 393 FVLAHIFSNKIEVSYQEAVALKRQ 416
FVL HIFS KIEV+Y+EA+ALKRQ
Sbjct: 297 FVLDHIFS-KIEVAYKEAIALKRQ 319
>AT4G16045.1 | Symbols: | TRAF-like superfamily protein |
chr4:9089906-9091860 FORWARD LENGTH=382
Length = 382
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 185/369 (50%), Gaps = 90/369 (24%)
Query: 104 GCDVCNHLSLFLCVANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGW 163
G DV N LSLFLCVAN++KLLPGWSH AQF++AV NKDPKKSK +DTLH+FWKKEHDWGW
Sbjct: 23 GVDVSNCLSLFLCVANYEKLLPGWSHLAQFSVAVENKDPKKSKIADTLHQFWKKEHDWGW 82
Query: 164 KKFMELSKVYDGFVDSSDNLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQIC 223
KKF+EL K+ DGF+D D+L +KAQVQ L NV ++C
Sbjct: 83 KKFIELPKLQDGFIDKFDSLSLKAQVQEGTSYG--------------LFGKSGENVHELC 128
Query: 224 RRFVEERRSKLGKLIEDKAKWSSFCTFWREIDQSARRRMSRERMDVILKLVVKHFFIEKE 283
R E++++ G + + W +D +AR +S E+MDVILK VVKHFF++ E
Sbjct: 129 GR--EKKQAYEGD--RRQKEMEELMCLWLGMDHNARLEISSEKMDVILKQVVKHFFVKNE 184
Query: 284 VTSTLVMDSLYSGLKALESQ-----------------SN------------CKKNRV--- 311
VTSTL+MD L+ LK+LE + SN KK R
Sbjct: 185 VTSTLLMDFLFYRLKSLEEKRRRLETLVRVVAKEVINSNQSESAMKNLEEETKKERTNDD 244
Query: 312 ---------------KLLDAEEMPATIVRAEKDMFXXXXXXXXXXERATIEPLP----PK 352
+ +DA E A+I DM ER + PLP PK
Sbjct: 245 KEFALKINEDETKNERTIDAMEFEASIAYVVNDML-GVTDPLLRLERFVLAPLPEMGSPK 303
Query: 353 -----DEKGPQNRTKDGNSGEDFNKDSIXXXXXXXXXXXXXXXXIFVLAHIFSNKIEVSY 407
+ + N D D+ + ++ +FVL HIF NKIE +Y
Sbjct: 304 LLQVSNLRIQHNMEPDEKQLADYGRWAL---------------EVFVLDHIFCNKIEFTY 348
Query: 408 QEAVALKRQ 416
+E +ALKRQ
Sbjct: 349 EETIALKRQ 357
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+TW I NFS+ N R+ S F VG YKW ILI+P+G +V +HLS++L V++ L GW
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDVSDAASLPYGW 114
Query: 128 SHFAQFTIAVVNKDPKKSKYS---DTLHRFWKKEHDWGWKKFMELSKVYD---GFVDSSD 181
S +AQF++AVVN+ ++Y+ +T H+F +E DWG+ FM LS++YD G++ +D
Sbjct: 115 SRYAQFSLAVVNQ--IHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL-VND 171
Query: 182 NLIIKAQVQV 191
++++A+V V
Sbjct: 172 TVLVEAEVAV 181
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+TW I NFS+ N R+ S F VG YKW ILI+P+G +V +HLS++L V++ L GW
Sbjct: 55 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDVSDAASLPYGW 113
Query: 128 SHFAQFTIAVVNKDPKKSKYS---DTLHRFWKKEHDWGWKKFMELSKVYD---GFVDSSD 181
S +AQF++AVVN+ ++Y+ +T H+F +E DWG+ FM LS++YD G++ +D
Sbjct: 114 SRYAQFSLAVVNQ--IHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL-VND 170
Query: 182 NLIIKAQVQV 191
++++A+V V
Sbjct: 171 TVLVEAEVAV 180
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+TW I NFS+ N R+ S F VG YKW ILI+P+G +V +HLS++L V++ L GW
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDVSDAASLPYGW 114
Query: 128 SHFAQFTIAVVNKDPKKSKYS---DTLHRFWKKEHDWGWKKFMELSKVYD---GFVDSSD 181
S +AQF++AVVN+ ++Y+ +T H+F +E DWG+ FM LS++YD G++ +D
Sbjct: 115 SRYAQFSLAVVNQ--IHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL-VND 171
Query: 182 NLIIKAQVQV 191
++++A+V V
Sbjct: 172 TVLVEAEVAV 181
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+TW I F+++N R+ S F VG YKW ILI+P+G +V +HLS++L VA+ L GW
Sbjct: 55 KFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDVADAANLPYGW 113
Query: 128 SHFAQFTIAVVNKDPKKSKYS---DTLHRFWKKEHDWGWKKFMELSKVYD---GFVDSSD 181
S ++QF++AVVN+ ++YS +T H+F +E DWG+ FM LS++Y+ G++ +D
Sbjct: 114 SRYSQFSLAVVNQ--VNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYL-VND 170
Query: 182 NLIIKAQVQV 191
++I+A+V V
Sbjct: 171 TVLIEAEVAV 180
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 89/130 (68%), Gaps = 10/130 (7%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+TW I F+++N R+ S F VG YKW ILI+P+G +V +HLS++L VA+ L GW
Sbjct: 54 KFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV-DHLSMYLDVADAANLPYGW 112
Query: 128 SHFAQFTIAVVNKDPKKSKYS---DTLHRFWKKEHDWGWKKFMELSKVYD---GFVDSSD 181
S ++QF++AVVN+ ++YS +T H+F +E DWG+ FM LS++Y+ G++ +D
Sbjct: 113 SRYSQFSLAVVNQ--VNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYL-VND 169
Query: 182 NLIIKAQVQV 191
++I+A+V V
Sbjct: 170 TVLIEAEVAV 179
>AT3G58210.1 | Symbols: | TRAF-like family protein |
chr3:21562645-21564067 REVERSE LENGTH=330
Length = 330
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 67 GKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVC-NHLSLFLCVANHDKLLP 125
K+TW I+NFS R + S+ F +G KW +L+YP+G + +HLSLFL VA+ L P
Sbjct: 7 NKFTWVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVADPRSLPP 66
Query: 126 GWSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKVY--DGFVDSSDN 182
GWS A++ + +VN+ K SK ++ F +K WG + L+K++ DG +D
Sbjct: 67 GWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDE 126
Query: 183 LIIKAQVQVI 192
L I A+V V+
Sbjct: 127 LKIVAEVNVL 136
>AT3G58250.1 | Symbols: | TRAF-like family protein |
chr3:21570745-21572143 REVERSE LENGTH=317
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDV-CNHLSLFLCVANHDKLLPG 126
K++W I+NFS + ++ S F + +W +L +P+G D +HLSL+L VA + L G
Sbjct: 10 KFSWVIKNFSSLQSEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAESESLPCG 69
Query: 127 WSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMEL 169
W AQF+ +VN P+K S+ +T+H F +K DWG+ + L
Sbjct: 70 WRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPL 113
>AT2G42460.1 | Symbols: | TRAF-like family protein |
chr2:17676399-17679247 REVERSE LENGTH=442
Length = 442
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKL 123
+L +TWKIENFS K + S+ F G + Y+LI P+G ++LSL+LCV N L
Sbjct: 5 DLQKTFTWKIENFSG-RKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSL 63
Query: 124 LPGWSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSDN 182
PGW A V+N+ K+ + S+ F + WG++ + L+K+ D + ++
Sbjct: 64 QPGWKRRASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQDRELLENNT 123
Query: 183 LIIKAQVQV 191
L I+ ++V
Sbjct: 124 LFIEVYIKV 132
>AT2G42460.2 | Symbols: | TRAF-like family protein |
chr2:17678018-17679247 REVERSE LENGTH=299
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKL 123
+L +TWKIENFS K + S+ F G + Y+LI P+G ++LSL+LCV N L
Sbjct: 5 DLQKTFTWKIENFSG-RKFPITSTVFSSGGCECYVLIRPKGDGFEDYLSLYLCVGNPKSL 63
Query: 124 LPGWSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSDN 182
PGW A V+N+ K+ + S+ F + WG++ + L+K+ D + ++
Sbjct: 64 QPGWKRRASLHFIVLNQSGKEVHRTSERYGLFGPEIPGWGFRTALPLTKLQDRELLENNT 123
Query: 183 LIIKAQVQV 191
L I+ ++V
Sbjct: 124 LFIEVYIKV 132
>AT2G25320.1 | Symbols: | TRAF-like family protein |
chr2:10781951-10788065 REVERSE LENGTH=1673
Length = 1673
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 85/144 (59%), Gaps = 16/144 (11%)
Query: 67 GKYTWKIENFSQIN----KREL-----RSSAFEVGSYKWYILIYPQG-CDVCNHLSLFLC 116
GK+TW+IENF+++ KR++ +S F++G+ +++YP+G HLS+FL
Sbjct: 403 GKFTWRIENFTRLKDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPCHLSVFLE 462
Query: 117 VANHDKLLPGWSHFAQFTIAVVNKD-PKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD- 174
V + + WS F ++VVN+ +KS ++ +R+ K DWGW++F+ L+ ++D
Sbjct: 463 VTD-SRSSSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQ 521
Query: 175 --GFVDSSDNLIIKAQVQVIREKA 196
GF+ D ++ A+V +++E +
Sbjct: 522 DSGFL-VQDTVVFSAEVLILKETS 544
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 67 GKYT----WKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCD--VCNHLSLFLCVANH 120
G+Y+ W +E+F+++ + L S F+VG Y +L+YP+G + ++S++L + +
Sbjct: 67 GEYSALCRWTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGYISIYLQIMDP 126
Query: 121 DKLLPG-WSHFAQFTIAVVN-KDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD---G 175
W FA + +++VN D + + D+ HRF K+ GW F S + D G
Sbjct: 127 RGTTSSRWDCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDPKMG 186
Query: 176 FVDSSDNLIIKAQVQVIRE 194
F+ ++D+L+I A + ++ E
Sbjct: 187 FLFNNDSLLITADILILNE 205
>AT3G58360.1 | Symbols: | TRAF-like family protein |
chr3:21593505-21594866 REVERSE LENGTH=298
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKL 123
+L K TW IENFS ++ +++ S F VG KW L+YP+G +V ++L L+L VA+++ L
Sbjct: 4 QLAKKITWAIENFSSLHSKKIYSDPFIVGGCKWRFLVYPKGNNV-DYLFLYLEVADYESL 62
Query: 124 LPGWSHFAQFTIAVVNKDP-KKSKYSDTLHRFWKKEHDWGWKKFMELSKVY---DGFVDS 179
P W A++ + VVN++ K+SK ++ F + WG L+++ GF+ +
Sbjct: 63 SPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVN 122
Query: 180 SDNLIIKAQVQVI 192
+ L I A+++V+
Sbjct: 123 GE-LKIVAEIEVL 134
>AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKL 123
E+ K+TW I+NFS R+ S F V KW +L +P+G V LSL+L VA + L
Sbjct: 4 EVDNKFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGV-EKLSLYLAVAGSEFL 62
Query: 124 LPGWSHFAQFTIAVVNK-DPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD---GF-VD 178
GW A F +VVN+ + S+ +T + F DWG+ + L K++D GF V+
Sbjct: 63 PDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVN 122
Query: 179 SSDNLIIKAQVQVIREKADRP 199
+++ V + K D P
Sbjct: 123 GELKIVVDVSVLEVIGKLDVP 143
>AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKL 123
E+ K+TW I+NFS R+ S F V KW +L +P+G V LSL+L VA + L
Sbjct: 4 EVDNKFTWVIKNFSSQQSRKNYSDEFFVDGCKWRLLAFPKGNGV-EKLSLYLAVAGSEFL 62
Query: 124 LPGWSHFAQFTIAVVNK-DPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD---GF-VD 178
GW A F +VVN+ + S+ +T + F DWG+ + L K++D GF V+
Sbjct: 63 PDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGFLVN 122
Query: 179 SSDNLIIKAQVQVIREKADRP 199
+++ V + K D P
Sbjct: 123 GELKIVVDVSVLEVIGKLDVP 143
>AT1G69650.1 | Symbols: | TRAF-like family protein |
chr1:26197498-26198821 REVERSE LENGTH=294
Length = 294
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 66 YGKYTWKIENFSQINKREL-RSSAFEVGSYKWYILIYPQGCDVCN--HLSLFLCVANHDK 122
Y K TW ++NFSQ + E + + F +G +W + ++P+G +LS+FL +A+++
Sbjct: 156 YPKVTWSVKNFSQWKENECSKPNRFSIGGREWVLKLFPKGNSRAKGKYLSVFLYLADNET 215
Query: 123 LLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHD--WGWKKFMELSKVYDGFVDSS 180
L P F Q + ++N P S + + +W K + +GW KF+ L K+ ++D
Sbjct: 216 LKPDEKIFTQVVVRILN--PLGSNHVASRLNYWHKGSNFGYGWCKFLSLDKIRKTYLDKE 273
Query: 181 DNLIIKAQVQVI 192
D L+I+A+ +V+
Sbjct: 274 DTLMIEAEFEVV 285
>AT3G58220.2 | Symbols: | TRAF-like family protein |
chr3:21564677-21566435 REVERSE LENGTH=453
Length = 453
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 69 YTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWS 128
++W I++FS + R + S F +G KW ++ YP G + ++SL++ VA+ L GWS
Sbjct: 13 FSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVADSKHLPSGWS 72
Query: 129 HFAQFTIAVVNKD---PKKSKYSDTLHRFWKKEHDWGWKKFMELSKVY--DGFVDSSDNL 183
+ + VVN + P + KY L F +K WG+K + SK+ +GF+ S +
Sbjct: 73 INTELRMEVVNHNLYKPSQQKYRKNLW-FDQKTPSWGYKTMIRHSKLSGEEGFLVSGEVT 131
Query: 184 IIKAQVQVIR 193
I+ ++ V R
Sbjct: 132 IV-VKIDVYR 140
>AT3G58220.1 | Symbols: | TRAF-like family protein |
chr3:21565173-21566435 REVERSE LENGTH=351
Length = 351
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 69 YTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWS 128
++W I++FS + R + S F +G KW ++ YP G + ++SL++ VA+ L GWS
Sbjct: 13 FSWVIKDFSSLGVRAIYSDEFVIGGCKWRLIAYPMGNRIKKYMSLYVEVADSKHLPSGWS 72
Query: 129 HFAQFTIAVVNKD---PKKSKYSDTLHRFWKKEHDWGWKKFMELSKVY--DGFVDSSDNL 183
+ + VVN + P + KY L F +K WG+K + SK+ +GF+ S +
Sbjct: 73 INTELRMEVVNHNLYKPSQQKYRKNLW-FDQKTPSWGYKTMIRHSKLSGEEGFLVSGEVT 131
Query: 184 IIKAQVQVIR 193
I+ ++ V R
Sbjct: 132 IV-VKIDVYR 140
>AT2G25330.1 | Symbols: | TRAF-like family protein |
chr2:10788946-10791331 REVERSE LENGTH=693
Length = 693
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 15/144 (10%)
Query: 67 GKYTWKIENFS---------QINKRELRSSAFEVGSYKWYILIYPQG-CDVCNHLSLFLC 116
GK++W+IENF+ +I ++S F++G+ +++YP+G +HLS+FL
Sbjct: 358 GKFSWRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLE 417
Query: 117 VANHDKLLPGWSHFAQFTIAVVN-KDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD- 174
V + WS F ++VVN + +KS ++ +RF K E DWGW++F+ L+ ++D
Sbjct: 418 VTDSRSSSSDWSCFVSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQ 477
Query: 175 --GFVDSSDNLIIKAQVQVIREKA 196
GF+ D+++ +V +++E +
Sbjct: 478 DSGFL-VQDSVVFSVEVLMLKETS 500
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 67 GKYT----WKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCD--VCNHLSLFLCVANH 120
G+YT W +E+F+++ + L S F+VG Y +L+YP+G + +S++L + +
Sbjct: 42 GEYTALCRWTVESFTRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGSISIYLQIIDP 101
Query: 121 DKLLPG-WSHFAQFTIAVVNK-DPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD---G 175
W FA + ++++N D + ++ HRF K+ GW F S V D G
Sbjct: 102 RGTSSSLWDCFASYQLSIINHVDDSLTIRKNSWHRFSNKKRSHGWCDFTLNSSVLDPKMG 161
Query: 176 FVDSSDNLIIKAQVQVIREKA 196
F+ ++D+L+I A + ++ E
Sbjct: 162 FLFNNDSLLITADIMILNESV 182
>AT2G05420.1 | Symbols: | TRAF-like family protein |
chr2:1983901-1985341 FORWARD LENGTH=297
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 70 TWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDV-------CNHLSLFLCVANHDK 122
TW IENFS + + S F VG KW + YP+G + N+L+L+L VAN
Sbjct: 11 TWVIENFSSLQSASIHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALYLNVANSKS 70
Query: 123 LLPGWSHFAQFTIAVVN-KDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVY--DGFVDS 179
GW+ +F++ +VN K K SK +++ H F K G+ + L+ ++ +GF+ +
Sbjct: 71 FPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLHTNEGFLVN 130
Query: 180 SDNLIIKAQVQVI 192
+ L + A+V+V+
Sbjct: 131 GE-LTLVAKVEVL 142
>AT1G31400.1 | Symbols: | TRAF-like family protein |
chr1:11245225-11246481 REVERSE LENGTH=278
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQG-CDVCNH-LSLFLCVANHDKLLP 125
+ TW I+NFS + + F VG KW++L YP+G D N LSLFL V + D L
Sbjct: 8 RITWTIKNFSSLQSHAIYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVPDPDDLPS 67
Query: 126 GWSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSDNLI 184
GW + + VVN+ +K SK F+ + +G + + L+++Y GF +
Sbjct: 68 GWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLPLTELYGGF-------L 120
Query: 185 IKAQVQVIRE 194
+ QV+++ E
Sbjct: 121 VSGQVKIVAE 130
>AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:9974912-9977927 REVERSE
LENGTH=358
Length = 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+TW I+N++ + + S F+ G KW +L +P+G ++ ++ L++CV N + L GW
Sbjct: 96 KFTWVIKNYNSLGSGSVYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNSESLPSGW 155
Query: 128 SHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSD-NLII 185
A+ + +VN+ P S+ + ++ F +K+ G++ LS+ + SSD ++
Sbjct: 156 RRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSE-----IQSSDKGFLV 210
Query: 186 KAQVQVIRE 194
+V+++ E
Sbjct: 211 NGEVKIVAE 219
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCD-VCNHLSLFLCVANHDKLLPG 126
K+ W I+NF+ ++ + S F+ G KW ++ YP+ D SLFLCV + + L G
Sbjct: 9 KFAWVIKNFNSLDTTRVYSDTFKAGRCKWRLVAYPKRRDRYTTSFSLFLCVPDSESLPSG 68
Query: 127 W 127
W
Sbjct: 69 W 69
>AT3G58410.1 | Symbols: | TRAF-like family protein |
chr3:21604871-21606229 REVERSE LENGTH=328
Length = 328
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 21/128 (16%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+ W I+NFS + ++ S F++G KW + IYP+G + C++LSLFL VA+ L GW
Sbjct: 29 KFAWVIKNFSSLQCKKFYSVPFQIGDCKWRLSIYPKGNN-CDYLSLFLEVADFKSLPSGW 87
Query: 128 SHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYD---GFVDSSDNLI 184
+ + + +V ++ W WG+ + L+K++D GF+ + + L+
Sbjct: 88 RRYVKLRLYIVKQE------------MW----GWGFLYMLPLTKLHDEKEGFLVNGE-LM 130
Query: 185 IKAQVQVI 192
I A+V +
Sbjct: 131 IVAEVDAL 138
>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
chr3:21591618-21592836 REVERSE LENGTH=301
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K TW I+NF+ + + S F VG KW++ YP+G + N LSLFL VA L GW
Sbjct: 8 KITWTIKNFASLLSDLIYSDHFVVGGCKWHLRAYPKGYNNANSLSLFLGVAVPTSLPSGW 67
Query: 128 SHFAQFTIAVVNKDPKK---SKYSDTLHRFWKKEHDWGWKKFMELSKVY---DGFVDSSD 181
+F + +VN+ K SK ++ F +K +WG L++++ GF+ + +
Sbjct: 68 RRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDSGFLLNGE 127
Query: 182 NLIIKAQVQVI 192
L I +++V+
Sbjct: 128 -LKIVVEIKVL 137
>AT1G31390.1 | Symbols: | TRAF-like family protein |
chr1:11243191-11244392 REVERSE LENGTH=268
Length = 268
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNH--LSLFLCVANHDKLLP 125
K TW I+NFS + + + S F VG KW+++ YP+G + LSL+L VA+ L
Sbjct: 8 KITWTIKNFSFVQSQAIDSDIFVVGDSKWHLVAYPKGNGESTNKCLSLYLNVADFQSLPN 67
Query: 126 GWSHFAQFTIAVVNKDPKKSKYSDTLHR-FWKKEHDWGWKKFMELSKVYD---GFVDSSD 181
GW ++ + VVN+ +K + + F+K H G++ + LSK+ D GF+ + D
Sbjct: 68 GWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNGGFLVNGD 127
>AT2G42480.1 | Symbols: | TRAF-like family protein |
chr2:17685805-17689851 REVERSE LENGTH=743
Length = 743
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 69 YTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCN-HLSLFLCVANHDKLLPGW 127
+ ++I+NFS+ K + S AF G +W++ +YP+G + + H+SL+L VAN L GW
Sbjct: 8 FRFEIDNFSE-KKDVIASKAFVSGGCEWFLYLYPKGQSLNDDHMSLYLSVANSKSLGSGW 66
Query: 128 SHFAQFTIAVVNKDPK---KSKYSDTLHRFWKKEHDWGWKKFMELSKVYD-GFVDSSDNL 183
A+F +V+N+ K +S S F + WG +K + LSK + GF++ D L
Sbjct: 67 KRSAKFYFSVLNESDKELYRSTISQEFCLFCVQALAWGIRKALPLSKFEEKGFLE-KDKL 125
Query: 184 IIKAQVQ 190
I++ ++
Sbjct: 126 IVEVYIK 132
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 69 YTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWS 128
+T++IENFS+ K + S F G W++ +YP + +H+S++L VAN L PGW
Sbjct: 393 FTFEIENFSE-RKYLIWSPIFISGQCHWFVKVYPIKDNNYDHVSVYLHVANPQSLRPGWK 451
Query: 129 HFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVY-DGFVDSSDNLII 185
A F++ + N+ K+ K + E + K + K+ +GF++ +D LII
Sbjct: 452 RRAHFSLILSNQSGKEVKIPSDSCDLFCTELSSSYPKILPPIKLKEEGFLE-NDKLII 508
>AT3G58260.1 | Symbols: | TRAF-like family protein |
chr3:21573754-21575114 REVERSE LENGTH=321
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 64 ELYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSL--FLCVANHD 121
++ +TW I+N S + E+RS F VG KW ++ YP+ D +LSL +L V +
Sbjct: 4 QINNTFTWVIKNLSTLQGLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGVPDCC 63
Query: 122 KLLP-GWSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKV---YDGF 176
+ LP GW A+F++ +VN+ + S+ +T F + WG+ + L V Y GF
Sbjct: 64 ESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGF 123
Query: 177 VDSSDNLIIKAQVQVI 192
+ +D +++ V VI
Sbjct: 124 L-VNDEVMVAVAVDVI 138
>AT3G44790.1 | Symbols: | TRAF-like family protein |
chr3:16328792-16330265 FORWARD LENGTH=324
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 66 YGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLP 125
Y K+TW I+NFS + + + S F +G KW++ +G N+LSLFL VA L
Sbjct: 3 YEKFTWVIKNFSSLQSKYINSDKFVIGGCKWFL----KGYQNANYLSLFLMVATSKTLPC 58
Query: 126 GWSHFAQFTIAVVNK 140
GW + +F + VVN+
Sbjct: 59 GWRRYTRFRLTVVNQ 73
>AT3G17380.1 | Symbols: | TRAF-like family protein |
chr3:5950240-5952124 FORWARD LENGTH=309
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGC--DVCNHLSLFLCVANHDKLLP 125
K+ WKIENFS+++K S+AF G KW I YP G HLS++L + + + +
Sbjct: 175 KHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPETISD 234
Query: 126 GWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVYDGFVDSSDNLII 185
G F +FTI + ++ + F + + GW K+ +S VY F + L++
Sbjct: 235 GTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKY--VSMVY--FTQPNSGLLL 290
Query: 186 K 186
K
Sbjct: 291 K 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 69 YTWKIENFSQINKRELR---SSAFEVGSYKWYILIYPQGCDVCN---HLSLFLCVANHDK 122
Y KIE+FS + K + + +FE G YKW +++YP G N H+S++L +A+
Sbjct: 22 YMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKDHVSVYLSLADSSS 81
Query: 123 LLPGWSHFAQFTIAVVNKDPKKSKY---SDTLHRFWKKEHDWGWKKFM---ELSKVYDGF 176
L PGW +A F + ++ D K Y RF + +WG+ KF+ S +G+
Sbjct: 82 LSPGWEVYAVFRLYLL--DQNKDNYLILQGNERRFHSVKREWGFDKFIPTGTFSDASNGY 139
Query: 177 VDSSDNLIIKAQVQVIREKADRPFRCL 203
+ D + A V V +E+ CL
Sbjct: 140 L-MEDTCMFGADVFVSKERRSGRGECL 165
>AT3G58340.1 | Symbols: | TRAF-like family protein |
chr3:21589071-21590401 REVERSE LENGTH=325
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGW 127
K+ W+I+NFS +N S +G KW ++ +P+G ++LSL+L VA+ L GW
Sbjct: 8 KFCWEIKNFSSLNSERCHSVPVVIGDCKWRLVAFPKGYK-ADYLSLYLEVADFKSLPSGW 66
Query: 128 SHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKVY--DGFVDSSDNLI 184
+ +F +VN+ ++ S +T F + WG++ + L+++ DG + ++
Sbjct: 67 RRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVM 126
Query: 185 IKAQVQVI 192
I A+V+ +
Sbjct: 127 IVAEVEFL 134
>AT1G69660.1 | Symbols: | TRAF-like family protein |
chr1:26199623-26200603 REVERSE LENGTH=231
Length = 231
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCN--HLSLFLCVANHDKLLP 125
K++W ++NFS++ + S+ + +G +W + +YP+G + +LSL++ +A+ + L
Sbjct: 96 KFSWNLKNFSELKEDVYTSNKYPMGGKEWVLKLYPKGNSRADGKYLSLYVHLADSETLKS 155
Query: 126 GWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHD--WGWKKFMELSKVYDGFVDSSDNL 183
+F Q + V+N P S + + W KE WGW F+ ++ + ++D D L
Sbjct: 156 DEKNFKQGHVRVLN--PLGSNHVEVQSSCWYKESSRGWGWDHFLSIANLRKTYLDKEDAL 213
Query: 184 IIKAQVQVIREKADRP 199
++ + +V+ P
Sbjct: 214 NVEIEFKVVSATKYSP 229
>AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:16343333-16346027
FORWARD LENGTH=564
Length = 564
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 17/137 (12%)
Query: 66 YGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLP 125
Y K+TW I+NFS + ++S F +G KW +L YP G ++LSL+L L
Sbjct: 3 YEKFTWVIKNFSSLQSEYIKSDIFVIGGCKWCLLAYPNGKQNASYLSLYLDGPTLKTLPC 62
Query: 126 GWSHFAQFTIAVVNKDPKKSKYSDTLHR-------FWKKEHDWGWKKFMELSKV---YDG 175
G +F + VVN + S+ L R F KK G+++ + L+K+ + G
Sbjct: 63 GCRRRIRFRLTVVN------QLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGG 116
Query: 176 FVDSSDNLIIKAQVQVI 192
F+ +++ I+ A+V V+
Sbjct: 117 FLVNNEVKIV-AEVDVL 132
>AT3G58200.1 | Symbols: | TRAF-like family protein |
chr3:21560086-21561358 REVERSE LENGTH=319
Length = 319
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 67 GKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPG 126
K+ W I+NFS + + S F VGS KW ++ YP+G SLFL V + L
Sbjct: 7 NKFRWVIKNFSSLGSERVFSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTDFKTLPCD 66
Query: 127 WSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFMELSKV 172
W + + VVN+ ++ S +T F +K WG+ + L+++
Sbjct: 67 WKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTEL 113
>AT3G58440.1 | Symbols: | TRAF-like superfamily protein |
chr3:21618446-21621249 REVERSE LENGTH=601
Length = 601
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 65 LYGKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLL 124
+ K+TW +E FS + K + S F V W +L + +G + S++L + L
Sbjct: 7 MQDKFTWVLEKFSSL-KDQCYSPVFTVAGCNWRLLSFLKGAKNDRYFSVYLDL-EPGSLP 64
Query: 125 PGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSK---VYDGFVDSSD 181
PGW +F+I + N P + F K + WG++ F+ L K + +GF+ +D
Sbjct: 65 PGWRREVKFSITLDNVCPNTDRVLGGPCFFDAKSNIWGFQDFLLLEKLVNIAEGFL-VND 123
Query: 182 NLIIKAQVQVI 192
L I A+V V+
Sbjct: 124 RLTIVAEVDVL 134
>AT3G58290.1 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=282
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 68 KYTWKIENFSQINKRELR-SSAFEVGSYKWYILIYPQGCD---------VCNHLSLFLCV 117
K+ W I+NFS + ++ S + W + YP+G + +HLSL+L V
Sbjct: 11 KFVWVIKNFSSLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHLSLYLEV 70
Query: 118 ANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHR-FWKKEHDWGWKKFMELSKVYD-- 174
+ + L GW + QF VVN+ + S + F KK +WGW++ + L+K+ D
Sbjct: 71 -DFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMISLTKLNDIN 129
Query: 175 -GFVDSSDNLIIKAQVQVI 192
GFV + + L+I A+V+
Sbjct: 130 SGFVVNGE-LMIVAEVETF 147
>AT2G01790.1 | Symbols: | TRAF-like family protein |
chr2:341322-342480 REVERSE LENGTH=269
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCD--VCNHLSLFLCVANHDKLLP 125
K W I NFS ++ + S F VG KW +L P+G + + ++ SL+LCV + + L
Sbjct: 8 KKLWVINNFSFLDSDRVYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSEYLPS 67
Query: 126 GWSHFAQFTIAVVNK-DPKKSKYSDTLHRFWKKEHDWGWKKFMEL---SKVYDGFVDSSD 181
GW A+ + +VN+ + S+ + ++ F +K G+ L Y GF+ + +
Sbjct: 68 GWRRRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFLVNGE 127
Query: 182 NLIIKAQVQVI 192
I+ A+V V+
Sbjct: 128 VDIV-AEVDVV 137
>AT3G22080.1 | Symbols: | TRAF-like family protein |
chr3:7777818-7781718 REVERSE LENGTH=648
Length = 648
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNH---LSLFLCVANHDKLL 124
K+ W ++NFS++N S F + KW + +YP+G DV LSL+L + + L
Sbjct: 513 KFFWTVKNFSELNNNVYTSGNFSMRERKWVLKLYPKG-DVKGDRKWLSLYLYLDQSETLK 571
Query: 125 PGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHD--WGWKKFMELSKVYDGFVDSSDN 182
F Q + V+ DP+ S + W + WG++KF+ L+++ ++D D
Sbjct: 572 ESEKIFVQAQLRVL--DPRGSNHVTHKISSWYTSSNTAWGYRKFVSLAEIPKAYLD-KDT 628
Query: 183 LIIKAQVQVIREKADRP 199
L ++ V+V+ E P
Sbjct: 629 LKVQIDVEVVSEAEFSP 645
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDV-CNHLSLFLCVANHDKLLPG 126
K++W ++ F ++ + S F VG +W++ ++P+G N LS+++ ++ + L
Sbjct: 189 KFSWSLKKFKELKEELYNSDKFLVGGRQWFLKVHPKGVKARDNSLSIYVYLSESETLNAE 248
Query: 127 WSHFAQFTIAVVNKDPKKSKYSDTLHRFWK----KEHDWGWKKFMELSKVYDGFVDSSDN 182
+ + + V+ DP S + FW+ K +GW F L KV + ++D+ +
Sbjct: 249 EKIYTRVHLRVL--DPFGSIHQAGQCNFWRTNTNKNQGYGWPTFASLDKVREKYLDNEGS 306
Query: 183 LIIKAQVQVIREKADRPFRCL 203
L I+ + V+ P L
Sbjct: 307 LNIEIEFAVVSSTKYSPILIL 327
>AT2G42470.1 | Symbols: | TRAF-like family protein |
chr2:17679887-17685187 REVERSE LENGTH=898
Length = 898
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 15/131 (11%)
Query: 70 TWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWSH 129
T + NFSQ + S F G WYI YP+G N+LSLFL + L W
Sbjct: 493 TLTVTNFSQ-KSSPINSPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPKSLGLNWKR 551
Query: 130 FAQFTIAVVNKDPKKSKYSDTLHR--------FWKKEHDWGWKKFMELSKVYDGFVDSSD 181
A F ++N+ K+ LHR F WG+ + + K+ D +D
Sbjct: 552 RANFYFVLLNQSGKE------LHRTPEIGDQWFCDDSLSWGFPQTLPRKKLLDKIFLDND 605
Query: 182 NLIIKAQVQVI 192
I+ ++VI
Sbjct: 606 RFNIEIYIKVI 616
>AT3G58240.1 | Symbols: | TRAF-like superfamily protein |
chr3:21568530-21569827 REVERSE LENGTH=317
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 67 GKYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPG 126
K+TW I+NF ++ + + S F +G KW+IL Y + D L L L + + + L
Sbjct: 7 NKFTWVIKNFCSVSPKPIYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVDCEFLPSE 66
Query: 127 WSHFAQFTIAVVNKDPKK-SKYSDTLHRFWKKEHDWGWKKFM--ELSKVYDGFVDSSDNL 183
W + + VVN KK S+ H F KKE G F EL+ GF+ +
Sbjct: 67 WRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKGGSLFHLSELTDKKSGFLVDGEVE 126
Query: 184 IIKAQVQVIREKADRPFR 201
I+ AQ+ V+ + DR F
Sbjct: 127 IV-AQITVL--ETDRRFH 141
>AT2G32870.1 | Symbols: | TRAF-like family protein |
chr2:13944968-13946776 REVERSE LENGTH=416
Length = 416
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 68 KYTWKIENFSQINKRELRSSAFEVGSYKWYILIYPQGC--DVCNHLSLFLCVANHDKLLP 125
++TWKI FS + E S F VG +W +++YP+G N LSL+L +++ P
Sbjct: 277 RFTWKITQFSSFDGEEHSSYEFTVGPRRWKLVMYPKGNGDGKGNSLSLYLFASDYVTNGP 336
Query: 126 GWSHFAQFTIAVVNKDPKKSKYSDTLHRFW-------KKEHDWGWKKFM---ELSKVYDG 175
A + + V+ D + +T R+W + + WG KF+ EL K G
Sbjct: 337 KGGTLAIYKLRVL--DQLNRNHCETECRYWFPYNPVNQMDSLWGRPKFLPLEELHKSSRG 394
Query: 176 FVDSSDNLIIKAQVQVI 192
F+ +D + I ++ ++
Sbjct: 395 FL-VNDQIYIGVEISIV 410