Miyakogusa Predicted Gene
- Lj6g3v0056720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0056720.1 tr|G7I4R8|G7I4R8_MEDTR Transcriptional regulator
SUPERMAN OS=Medicago truncatula GN=MTR_1g075430
PE=,39.11,6e-19,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; no
description,Zinc finger C2H2-type/integrase DNA-binding
dom,CUFF.57433.1
(170 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:28561... 61 3e-10
AT5G43540.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 61 4e-10
AT3G53820.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 60 9e-10
AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers superfam... 55 2e-08
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |... 55 3e-08
AT5G01860.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 52 1e-07
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup... 52 1e-07
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin... 52 2e-07
AT5G27880.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 51 3e-07
AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |... 51 3e-07
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260... 50 6e-07
AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 | chr1:24620... 50 6e-07
AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 50 8e-07
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016... 49 1e-06
AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 | chr5:86875... 49 2e-06
AT5G10970.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily... 49 2e-06
>AT3G09290.1 | Symbols: TAC1 | telomerase activator1 |
chr3:2856141-2856659 FORWARD LENGTH=172
Length = 172
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 20 DYSEGTKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQRM 62
D S R Y C+FC RGF+NA+ALGGHMNIHR++R K +Q++
Sbjct: 26 DDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKL 68
>AT5G43540.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:17496993-17497406 FORWARD LENGTH=137
Length = 137
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
Query: 28 LYDCTFCKRGFTNARALGGHMNIHRKER-TKAK 59
+Y+CTFCKRGFTNA+ALGGHMNIHR++R KAK
Sbjct: 34 MYECTFCKRGFTNAQALGGHMNIHRRDRLNKAK 66
>AT3G53820.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr3:19938706-19939134 FORWARD LENGTH=142
Length = 142
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 21 YSEGTKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQ 60
+S R Y C FC+RGF+NA+ALGGHMNIHRK+R K +Q
Sbjct: 13 WSGSQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQ 52
>AT3G23140.1 | Symbols: URO | C2H2 and C2HC zinc fingers
superfamily protein | chr3:8250579-8251097 FORWARD
LENGTH=172
Length = 172
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 26 KRLYDCTFCKRGFTNARALGGHMNIHRKERTK 57
+R YDC CKRGFTN +ALGGH NIHR+ER +
Sbjct: 18 RRTYDCDICKRGFTNPQALGGHNNIHRRERER 49
>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
chr2:15827706-15828620 REVERSE LENGTH=304
Length = 304
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 11 KESDQQEV---QDYSEGT---KRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQ 60
KES +E+ +D + G+ R Y C+FC+R F +A+ALGGHMN+HR++R + KQ
Sbjct: 15 KESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70
>AT5G01860.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:335630-336277 FORWARD LENGTH=215
Length = 215
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 22 SEGTKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQR 61
+E R++ CTFCK+ F+ ++ALGGH N H++ER+ AK+R
Sbjct: 60 NEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRR 99
>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
superfamily protein | chr5:1828426-1829106 REVERSE
LENGTH=226
Length = 226
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 27 RLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQR 61
R Y C+FC R F +A+ALGGHMN+HR++R + KQ+
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ 87
>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
fingers superfamily protein | chr3:8242504-8243118
FORWARD LENGTH=204
Length = 204
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 2 VRSETTTFSKESDQQEVQDYSEG---TKRLYDCTFCKRGFTNARALGGHMNIHRKERTKA 58
R+ ++ + Q+ DY G R Y C+FCKR F +A+ALGGHMN+HR++R +
Sbjct: 17 ARTSPWSYGDYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL 76
Query: 59 K 59
+
Sbjct: 77 R 77
>AT5G27880.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:9885908-9886744 FORWARD LENGTH=278
Length = 278
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 21 YSEGTKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQR 61
Y + ++Y C FCK+GF+ ++ALGGH N H++ER K+R
Sbjct: 72 YPSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKKR 112
>AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |
chr2:17658150-17658794 FORWARD LENGTH=214
Length = 214
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 29 YDCTFCKRGFTNARALGGHMNIHRKERTKAKQ 60
Y C+FC+R F +A+ALGGHMN+HR++R K +Q
Sbjct: 49 YTCSFCRREFRSAQALGGHMNVHRRDRAKLRQ 80
>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
chr1:8726009-8726638 REVERSE LENGTH=209
Length = 209
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 23 EGTKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQRM 62
E R++ C +C+R F +++ALGGH N H++ERT AK+ M
Sbjct: 53 EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAM 92
>AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 |
chr1:24620063-24620845 REVERSE LENGTH=260
Length = 260
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 25 TKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQRM 62
+KR++ C +C+R F +++ALGGH N H++ERT AK+ M
Sbjct: 81 SKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAM 118
>AT4G17810.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr4:9906918-9907532 FORWARD LENGTH=204
Length = 204
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 10/58 (17%)
Query: 12 ESDQQEVQDYSEGTK----------RLYDCTFCKRGFTNARALGGHMNIHRKERTKAK 59
+ + EV+ + + TK R Y C FC+R F +A+ALGGHMN+HR++R ++
Sbjct: 19 DDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRASSR 76
>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
chr1:25016644-25017237 FORWARD LENGTH=197
Length = 197
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 5 ETTTFSKESDQQEVQDYSEGTKRLYDCTFCKRGFTNARALGGHMNIHRKERTKAKQ 60
ETT+ +S + S R Y+C +C R F N++ALGGH N H+KER K+
Sbjct: 17 ETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKR 72
>AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 |
chr5:8687524-8688231 FORWARD LENGTH=235
Length = 235
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 26 KRLYDCTFCKRGFTNARALGGHMNIHRKERTKAK--QRM 62
++L+ C +C+R F +++ALGGH N H++ERT AK QRM
Sbjct: 58 QKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRM 96
>AT5G10970.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily
protein | chr5:3469268-3470086 FORWARD LENGTH=272
Length = 272
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 26 KRLYDCTFCKRGFTNARALGGHMNIHRKERTKAK--QRM 62
++L+ C +C+R F +++ALGGH N H++ERT AK QRM
Sbjct: 101 QKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRM 139