Miyakogusa Predicted Gene

Lj6g3v0043620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0043620.1 Non Chatacterized Hit- tr|F6HAK1|F6HAK1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.6,3e-18,coiled-coil,NULL; seg,NULL; DUF668,Protein of unknown
function DUF668; SUBFAMILY NOT NAMED,NULL;
FAM,NODE_22986_length_1954_cov_71.250771.path3.1
         (454 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23160.1 | Symbols:  | Protein of unknown function (DUF668) |...   415   e-116
AT5G04550.1 | Symbols:  | Protein of unknown function (DUF668) |...   186   4e-47
AT5G51670.1 | Symbols:  | Protein of unknown function (DUF668) |...   159   4e-39
AT1G34320.1 | Symbols:  | Protein of unknown function (DUF668) |...    63   4e-10
AT5G08660.1 | Symbols:  | Protein of unknown function (DUF668) |...    58   2e-08

>AT3G23160.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr3:8260059-8261654 REVERSE LENGTH=531
          Length = 531

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/459 (49%), Positives = 283/459 (61%), Gaps = 83/459 (18%)

Query: 1   MEGMVRKMDRYVSVTRNXXXXXXXXXXXXQAVKKFQHNQ-HEESRRAFEQKLVWQKQDVR 59
           ME MV+KM+R+V+ T +            QA+ K Q +Q H+ES +AFEQKL+WQ+QDV+
Sbjct: 151 MESMVKKMERFVNATCSLYCEMEVMNELEQAIVKLQRSQQHQESVKAFEQKLMWQRQDVK 210

Query: 60  HLKDISLWNQTFDKVVELLARTVCTIYARISVIFGESALRKNSLGVGGGSPGMQNECGFV 119
            L+D SLWNQT+DKVVE+LARTVCTIY RI  +FG   LR                    
Sbjct: 211 SLRDGSLWNQTYDKVVEMLARTVCTIYGRIETVFGGLGLR-------------------- 250

Query: 120 SGQINVQMSSERLKLKRNPSNRNGIHPGSAGRTAVVERRGTARRKTQIDMRRGELASI-R 178
            G+ +V +  +R K   N +++             V  R  A  K   D RR E     R
Sbjct: 251 -GKKDVTLKRDRSK---NEASK------------AVNSRSVAGFK---DSRRSEADEFTR 291

Query: 179 PEDFDFPCGTSPGRLFMECLSLSSSVAKFDDTDDGYVIHPEDQYSGSVGIGNSSTKREHL 238
             DF+FPCGT+PGR+FMECL+++ ++   D                              
Sbjct: 292 AGDFNFPCGTNPGRMFMECLAMNRTIGDDD------------------------------ 321

Query: 239 CHSGVLSHAQSSIPFTGD--LRPAKSGVQSCSTFGPRIWLTVYAPPSTLGGSALALHYAN 296
                    + + P +    +R  K G +S         LT +A  ST+GGSAL+LHYAN
Sbjct: 322 -DDDDEDGGRITFPLSTARMIRSNKFGFKS--------RLTQHASASTIGGSALSLHYAN 372

Query: 297 VIMVIEKLLRYPHLVGEEAKDDLYEMLPTXXXXXXXXXXXXYVKNLAIYDAPLAHDWKEK 356
           V++V+EKLL+YPHL+GEEA+DDLY+MLPT            Y+KN++IYDAPLAHDWKE 
Sbjct: 373 VVIVVEKLLKYPHLIGEEARDDLYQMLPTSLKTTLKASLRSYLKNISIYDAPLAHDWKET 432

Query: 357 LDGILRWLAPLAHNMIRWQSERNFE-QHQIVSRTNVLLLQTLYFADREKTEESICELLVG 415
           +DGIL WLAPLAHNMIRWQSERNFE Q+QIV RTNVLLLQTLYFADREKTE +IC+LLVG
Sbjct: 433 IDGILSWLAPLAHNMIRWQSERNFEQQNQIVKRTNVLLLQTLYFADREKTEAAICKLLVG 492

Query: 416 LNYICRYEQQQNALLDCASSFDFEDCMEWQLQCGASFLN 454
           LNYIC YEQQQNALLDCASSFD+EDC EWQ QC A++L+
Sbjct: 493 LNYICHYEQQQNALLDCASSFDYEDCFEWQSQCRAAYLD 531


>AT5G04550.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:1303757-1305556 REVERSE LENGTH=599
          Length = 599

 Score =  186 bits (471), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 5/169 (2%)

Query: 280 APPSTLGGSALALHYANVIMVIEKLLRYPHLVGEEAKDDLYEMLPTXXXXXXXXXXXXYV 339
           A P+TLG + LALHYANVI+VIE+ +  PHL+G++A+DDLY MLP             Y 
Sbjct: 428 AAPNTLGTACLALHYANVIIVIERFVASPHLIGDDARDDLYNMLPASVRTSLRERLKPYS 487

Query: 340 KNLA---IYDAPLAHDWKEKLDGILRWLAPLAHNMIRWQSERNFEQHQIVSRTNVLLLQT 396
           KNL+   +YD  LA +W + + GIL WL PLAHNMI+WQSER++E   +VSRT+++L QT
Sbjct: 488 KNLSSSTVYDPGLAREWTDAMAGILEWLGPLAHNMIKWQSERSYEHQSLVSRTHIVLAQT 547

Query: 397 LYFADREKTEESICELLVGLNYICRYEQQQN--ALLDCASSFDFEDCME 443
           L+FA+++KTE  I ELLVGLNY+ R+ ++ N  AL +C SS   E C++
Sbjct: 548 LFFANQQKTEAIITELLVGLNYVWRFGRELNAKALQECTSSKTLEKCLD 596



 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 9   DRYVSVTRNXXXXXXXXXXXXQAVKKFQHNQH-EESRRAFEQKLVWQKQDVRHLKDISLW 67
           +R++S   +            Q  K+ + N+   ++   +++K+ W++ +V++L+D+SLW
Sbjct: 142 ERFISSNASLYQETEILADLEQTFKRMKSNESATDNLLEYQKKVTWKRHEVKNLRDVSLW 201

Query: 68  NQTFDKVVELLARTVCTIYARISVIFGES 96
           N+T+D  V LL R+V TI +R   +FG S
Sbjct: 202 NRTYDYTVILLVRSVFTILSRTKHVFGIS 230


>AT5G51670.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:20993560-20995096 FORWARD LENGTH=474
          Length = 474

 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 79/152 (51%), Positives = 101/152 (66%), Gaps = 6/152 (3%)

Query: 281 PPSTLGGSALALHYANVIMVIEKLLRYPHLVGEEAKDDLYEMLPTXXXXXXXXXXXXYVK 340
           P +TLGG+ +ALHYAN+I+V+EK+++ P LVG +A+DDLY MLP                
Sbjct: 311 PETTLGGAGVALHYANLIVVMEKMIKQPQLVGLDARDDLYSMLPASVRSSLRSRLKGV-- 368

Query: 341 NLAIYDAPLAHDWKEKLDGILRWLAPLAHNMIRWQSERNFEQHQIVSRTN----VLLLQT 396
                D  LA +WK  L  ILRWL PLA NMIRWQSER+FEQ  + + TN    V+L+QT
Sbjct: 369 GFTATDGGLATEWKAALGRILRWLLPLAQNMIRWQSERSFEQQHMATATNSQNRVMLVQT 428

Query: 397 LYFADREKTEESICELLVGLNYICRYEQQQNA 428
           L FAD+ KTE +I ELLVGLNYI R+E++  A
Sbjct: 429 LVFADKVKTEAAITELLVGLNYIWRFEREMTA 460



 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 47  FEQKLVWQKQDVRHLKDISLWNQTFDKVVELLARTVCTIYARISVIFGESA 97
            + K+  QKQ V++LKD SLWN++FD VV +LAR+V T  AR+  +F  +A
Sbjct: 205 LQNKIERQKQHVKYLKDRSLWNKSFDTVVLILARSVFTALARLKSVFSSAA 255


>AT1G34320.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr1:12520713-12524046 FORWARD LENGTH=657
          Length = 657

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 16/152 (10%)

Query: 281 PP---STLGGSALALHYANVIMVIEKLLRYPHLVGEEAKDDLYEMLPTXXXXXXXXXXXX 337
           PP     LG + LALHYAN+I  I+ L+     +    +D LY+ LP             
Sbjct: 373 PPINHKKLGSAGLALHYANIITQIDTLVSRSSTMPASTRDALYQGLPPSIKSALRSR--- 429

Query: 338 YVKNLAIYDAPLAHDWKEKLDGILRWLAPLAHNMIR------WQSE---RNFEQHQIVSR 388
            +++  + +       K +++  L+WL P+A N  +      W  E      E +Q  + 
Sbjct: 430 -IQSFQVKEELTVPQIKAEMEKTLQWLVPVATNTTKAHHGFGWVGEWASSGSEANQRPAG 488

Query: 389 TNVLLLQTLYFADREKTEESICELLVGLNYIC 420
             +L + TL+ AD+EKTE  I +L+V L+++ 
Sbjct: 489 QTILRIDTLHHADKEKTEAYILDLVVWLHHLV 520


>AT5G08660.1 | Symbols:  | Protein of unknown function (DUF668) |
           chr5:2814526-2817845 FORWARD LENGTH=649
          Length = 649

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)

Query: 285 LGGSALALHYANVIMVIEKLLRYPHLVGEEAKDDLYEMLPTXXXXXXXXXXXXYVKNLAI 344
           LG + LALHYAN+I+ I+ L+     +   A+D LY+ LP              +K+  +
Sbjct: 372 LGPAGLALHYANIIVQIDTLVARASSITSNARDSLYQSLPPGIKLALRSK----IKSFNV 427

Query: 345 YDAPLAHDWKEKLDGILRWLAPLAHNMIR------WQSERNFEQHQIVSRT---NVLLLQ 395
                    K++++  L WL P+A N  +      W  E         S+    ++L ++
Sbjct: 428 DKELSVTQIKDEMERTLHWLVPVAGNTTKAHHGFGWVGEWANTGTDFTSKPSGGDILRIE 487

Query: 396 TLYFADREKTEESICELLVGLNYIC 420
           TLY A +EKTE  I   ++ L ++ 
Sbjct: 488 TLYHASKEKTEIYILGQIIWLQHLV 512