Miyakogusa Predicted Gene

Lj6g3v0028740.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0028740.2 Non Chatacterized Hit- tr|I1N3T6|I1N3T6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,73.77,0,SUBFAMILY NOT NAMED,NULL; NOP14,Nop14-like protein;
Nop14,Nop14-like protein; coiled-coil,NULL; seg,,CUFF.57394.2
         (561 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69070.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   476   e-134

>AT1G69070.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Nop14-like protein
           (InterPro:IPR007276); Has 69842 Blast hits to 35213
           proteins in 1572 species: Archae - 363; Bacteria -
           20593; Metazoa - 20851; Fungi - 8010; Plants - 2912;
           Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
           BLink). | chr1:25967421-25971389 REVERSE LENGTH=901
          Length = 901

 Score =  476 bits (1224), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 266/580 (45%), Positives = 341/580 (58%), Gaps = 38/580 (6%)

Query: 1   MGFEMRARPSDRMKTPEEVAQXXXXXXXXXXXXXXXXMIAAXXXXXXXXXXXXXXXXXXX 60
           M  E+RARPS+R KTPEE+AQ                M                      
Sbjct: 261 MSMEIRARPSERTKTPEEIAQKEREKLEALEEERKKRM--------------QETEELSD 306

Query: 61  XXXXXXXXXXXQKQRFPSGDDLGDSFSVNDETLTKKGCIEKILESINXXXXXXXXXXXXX 120
                      ++    SGDDLGDSFSV +E   K+G I+ +LE  +             
Sbjct: 307 GDEEIGGEESTKRLTVISGDDLGDSFSV-EEDKPKRGWIDDVLEREDNVDNSESDEDEDS 365

Query: 121 XXXXXXXXXXXXXXXFGKHKNDLTLKDWEQNDDDDIXXXXXXXXXXXXXXXXXXXXLDEL 180
                            K +    L+DWEQ+ DD++                     +  
Sbjct: 366 ESEEEEDDDGESDGGDEKQRKGHHLEDWEQS-DDELGAELEDEEEDDDEEDDDEEDAELR 424

Query: 181 --KILDTN---------------RKVGGKK--SKDFDIPYIIQAPQTFGELCSLVDKCSN 221
             K L  +                K   KK  S   DIP++I  P+ F EL +LV+ CSN
Sbjct: 425 VHKKLKNDYAAPYKGEGLSGTVKEKTNMKKMSSTQRDIPFMIDPPKNFEELLALVEDCSN 484

Query: 222 SNTILVINRIRKSNSIKLAVENRKKMQTFYGVLLEYFAVLANKKPLNVELLNMLVKPLIE 281
            + IL++NRIR ++SIK+  ENRKKMQ FYGVLL+YFAVLA+KKPLN +LLNMLVKPLIE
Sbjct: 485 EDVILIVNRIRIAHSIKIKAENRKKMQVFYGVLLQYFAVLASKKPLNFDLLNMLVKPLIE 544

Query: 282 MSLETPYFAAVCARTRIQKIREQFVGXXXXXXXXXXXXXKTLCLLRLWSMTFSCSDFRHP 341
           MS+E PYFAA+CAR R+ K R QF               KTL LLRLWS+ F CSDFRH 
Sbjct: 545 MSMEIPYFAAICARQRLLKTRSQFCEAIKNPEDGCWPSLKTLFLLRLWSLIFPCSDFRHA 604

Query: 342 VLTPVILLMCEFLMRCPIASGRDIAIGCFLCSMLLSVFRQSRKFCPEPIMFLRTLLYAAT 401
           V+TP ILLMCE+LMRCPI+SGRDIAIG FLCS++L    QS+KFCPE I+F+RTLL AA+
Sbjct: 605 VMTPSILLMCEYLMRCPISSGRDIAIGSFLCSIVLL---QSKKFCPEAILFIRTLLMAAS 661

Query: 402 ESKYISDEDALFNHLMEPKALKPLLCIHETVNEISPLDFFKIINMPEDSCFFTSDSFRAS 461
           + K  +  ++ F H ME K+L PLLCI + V E+ PL+F KI+N P DS +F+SD FRAS
Sbjct: 662 DKKSPASAESEFYHFMELKSLTPLLCIQDNVKEVMPLNFLKIMNEPADSPYFSSDDFRAS 721

Query: 462 VLLSAVETLQGYINIYEGLSSFPEMFLPILRLLLEIAEQKNIPNALQDKIKDVAELIKLK 521
           +L S VETL+G++ I  GLSSFPE+F+PI  LL +I  Q+ IP  L++K++DVA+LI+ K
Sbjct: 722 ILSSVVETLEGFVEINGGLSSFPEIFMPISTLLHQIGNQEKIPQTLKEKLEDVAKLIEKK 781

Query: 522 VDEHHSLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDP 561
            D+HH  R+PL MRK KPV I+++NPKFEEN+V G D DP
Sbjct: 782 TDDHHKERKPLSMRKHKPVAIRMVNPKFEENFVPGMDNDP 821