Miyakogusa Predicted Gene

Lj6g3v0025640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0025640.1 CUFF.57381.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23490.1 | Symbols: CYN | cyanase | chr3:8423238-8424415 REVE...   231   1e-61

>AT3G23490.1 | Symbols: CYN | cyanase | chr3:8423238-8424415 REVERSE
           LENGTH=168
          Length = 168

 Score =  231 bits (590), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/159 (69%), Positives = 126/159 (79%)

Query: 5   KGSTVARLQSVKRNSGKSYSELAEETGLTNVYVAQLLRRQAQLKPDTAPKLQAALPDLTD 64
           K S   +L +VK  SGK++S+LA ETGLTNVYVAQLLRRQAQLKPDT PKL+ ALP LTD
Sbjct: 6   KQSVTNQLLAVKSASGKTFSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTD 65

Query: 65  ELVHEMMTPPLRSYDPNLIQDPTVYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFFCSX 124
           EL+ +MM+PP RSYDPNLIQ+PT+YRLNEAVMHFGESIKEIINEDFGDGIMSAIDF+CS 
Sbjct: 66  ELIGDMMSPPWRSYDPNLIQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSV 125

Query: 125 XXXXXXXXXXXXXLTFDGKYLPHTEQITENMVSRTRPQG 163
                        +T DGKYL H+EQ TENMVSR   +G
Sbjct: 126 DKIKGVDGNNRVVVTLDGKYLSHSEQRTENMVSRLNLKG 164