Miyakogusa Predicted Gene

Lj6g3v0003490.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0003490.2 CUFF.57397.2
         (777 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14310.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   749   0.0  
AT4G14310.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...   732   0.0  

>AT4G14310.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr4:8237137-8240324 REVERSE LENGTH=893
          Length = 893

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/712 (53%), Positives = 479/712 (67%), Gaps = 73/712 (10%)

Query: 101 LKRRG-DPIGKSAEKPSRNEKLKTCSKESEEKDKYPSRLHEKLAFLEGKVKRIASDIKKT 159
           L+R+  D +GK+ E    ++ ++     S    KYPS+LHEKLAFLEGKVK+IASDIKKT
Sbjct: 219 LRRKSLDNVGKAME---MSKDIRGNEGSSNSTAKYPSKLHEKLAFLEGKVKKIASDIKKT 275

Query: 160 KEMLDMNNPDASKVILSDIQDKISGIEKAMVRVVSTENENDNGDNGSTSKQLXXXXXXXX 219
           K+MLD+NNPD+SKVI+SDI  KI+GIEK+M  V+    +N                    
Sbjct: 276 KDMLDLNNPDSSKVIISDIHQKITGIEKSMSHVIDGPEKN-------------------- 315

Query: 220 XXXXXEIETEKGKSLVKGLNNEELEARLFPHQKLLRDRTVNK---------------DCV 264
                  +T K KS VKGLN EELE RL PHQ+LLR RT +K                 V
Sbjct: 316 -------KTTKAKSSVKGLNKEELEDRLLPHQRLLRSRTQSKTSSHVSKGHDSVESNKAV 368

Query: 265 KVEDEVLSLVDDNPIAVEFLASLEKGNGKVDACGGGPSDGNKASALNNQKYDIXXXXXXX 324
             E++  + V++N IA+EFLASL+K   KV       SD N    L  Q+ D        
Sbjct: 369 NAEEKPSAPVEENAIALEFLASLDKE--KVTFM----SDQNALENLEVQEMDTEEPSKEN 422

Query: 325 XXXXXXXXQENKQGMFVEEE------------------IDENFNFKLNEIGNKTAAAGWF 366
                     N   +    E                  ID+   ++LN+IG+KT+  GWF
Sbjct: 423 DVSKDVNLTSNLTEILRANEALEEIDDEENREEMELEEIDDGCMYQLNDIGSKTSTGGWF 482

Query: 367 VSEGEAVLLAHDDASCSYYDIANCEEKAVYMPPPGVSSNVWRDCWVIRAPGSDGCSGRFV 426
           VSEGEAV+LAHDD SCSYYD+AN E K+VY PP G+S N WRDCWV+RAPG+DGCSGR+V
Sbjct: 483 VSEGEAVILAHDDGSCSYYDVANSEVKSVYSPPDGISPNTWRDCWVVRAPGADGCSGRYV 542

Query: 427 VAASAGNTMDSGFCSWDFYTKEIRAFQAESGTTS-SRTALRPLPNNLVQRRNSAASCIMP 485
           VAASAGNT++SGFCSWDFYTK+I+A   E G++  SRTAL PLPNN    RN+ A  ++P
Sbjct: 543 VAASAGNTLESGFCSWDFYTKDIKALHIEDGSSRVSRTALAPLPNNTSHGRNTPACAVVP 602

Query: 486 AERQWWYKPCGPLIISTSSSQRSIKVFDVRDGEQIMKWDVQKPVLAMEYSSPLQWRNRGK 545
             +QWWY+PCGPLI ST S Q  +KVFD+RDGEQIMKW VQ PV A++YSSPLQWRNRGK
Sbjct: 603 ETQQWWYRPCGPLIASTGSFQSIVKVFDIRDGEQIMKWGVQNPVSALDYSSPLQWRNRGK 662

Query: 546 VVVAEAESISLWDVNSLSPQALLSVPSGGRKISALHVSNTDAELGGGVRKRVSSSAAEGN 605
           +V+AE E+IS+WDVNSL P+A  ++ S GRKISA H++NTDAE+GGGVR+RVSS  AEGN
Sbjct: 663 LVIAETEAISVWDVNSLHPEAQHTISSSGRKISAFHINNTDAEVGGGVRQRVSSLDAEGN 722

Query: 606 DGVFCTSDSINVLDFRQPSGVGLRISKLGVNVQSVFSSGDSVFLGCTXXXXX-XXXXXXX 664
           DGVFCTSDSIN+LDFR PSG+G +I KLGVN Q V S GDSVFLGCT             
Sbjct: 723 DGVFCTSDSINILDFRNPSGIGAKIPKLGVNAQCVSSRGDSVFLGCTNQKSTVKKQMASS 782

Query: 665 PQVQQFSLRRQALFSTYALPESSVHSHYAAISQVWGNSDFVMAVNGLGLHVFDAQKDDPL 724
            QVQQFS+R+Q L STY+LP+S+ H H++AI+QVWGNS+FVMA +G+GL VFD  K++ L
Sbjct: 783 SQVQQFSIRKQRLVSTYSLPDSNSHPHHSAITQVWGNSNFVMATSGMGLFVFDTAKEETL 842

Query: 725 RVLNLNMDSSSNAQSLREVVGPDDLYWPSFDYLGSRALLISRDRPAMWRHLI 776
           +   L  D  S  Q++RE++GP+D+Y PSFDY G R LLISRDRPA+WR+L+
Sbjct: 843 QQQPLTSDYGS-VQTVREIIGPNDMYCPSFDYSGCRVLLISRDRPALWRYLL 893


>AT4G14310.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr4:8237137-8240324 REVERSE LENGTH=920
          Length = 920

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/739 (51%), Positives = 479/739 (64%), Gaps = 100/739 (13%)

Query: 101 LKRRG-DPIGKSAEKPSRNEKLKTCSKESEEKDKYPSRLHEKLAFLEGKVKRIASDIKKT 159
           L+R+  D +GK+ E    ++ ++     S    KYPS+LHEKLAFLEGKVK+IASDIKKT
Sbjct: 219 LRRKSLDNVGKAME---MSKDIRGNEGSSNSTAKYPSKLHEKLAFLEGKVKKIASDIKKT 275

Query: 160 KEMLDMNNPDASKVILSDIQDKISGIEKAMVRVVSTENENDNGDNGSTSKQLXXXXXXXX 219
           K+MLD+NNPD+SKVI+SDI  KI+GIEK+M  V+    +N                    
Sbjct: 276 KDMLDLNNPDSSKVIISDIHQKITGIEKSMSHVIDGPEKN-------------------- 315

Query: 220 XXXXXEIETEKGKSLVKGLNNEELEARLFPHQKLLRDRTVNK---------------DCV 264
                  +T K KS VKGLN EELE RL PHQ+LLR RT +K                 V
Sbjct: 316 -------KTTKAKSSVKGLNKEELEDRLLPHQRLLRSRTQSKTSSHVSKGHDSVESNKAV 368

Query: 265 KVEDEVLSLVDDNPIAVEFLASLEKGNGKVDACGGGPSDGNKASALNNQKYDIXXXXXXX 324
             E++  + V++N IA+EFLASL+K   KV       SD N    L  Q+ D        
Sbjct: 369 NAEEKPSAPVEENAIALEFLASLDKE--KVTFM----SDQNALENLEVQEMDTEEPSKEN 422

Query: 325 XXXXXXXXQENKQGMFVEEE------------------IDENFNFKLNEIGNKTAAAGWF 366
                     N   +    E                  ID+   ++LN+IG+KT+  GWF
Sbjct: 423 DVSKDVNLTSNLTEILRANEALEEIDDEENREEMELEEIDDGCMYQLNDIGSKTSTGGWF 482

Query: 367 VSEGEAVLLAHDDASCSYYDIANCE---------------------------EKAVYMPP 399
           VSEGEAV+LAHDD SCSYYD+AN E                            K+VY PP
Sbjct: 483 VSEGEAVILAHDDGSCSYYDVANSEFMVNECNSLSIWVRLYEVTGVFGFVHYVKSVYSPP 542

Query: 400 PGVSSNVWRDCWVIRAPGSDGCSGRFVVAASAGNTMDSGFCSWDFYTKEIRAFQAESGTT 459
            G+S N WRDCWV+RAPG+DGCSGR+VVAASAGNT++SGFCSWDFYTK+I+A   E G++
Sbjct: 543 DGISPNTWRDCWVVRAPGADGCSGRYVVAASAGNTLESGFCSWDFYTKDIKALHIEDGSS 602

Query: 460 S-SRTALRPLPNNLVQRRNSAASCIMPAERQWWYKPCGPLIISTSSSQRSIKVFDVRDGE 518
             SRTAL PLPNN    RN+ A  ++P  +QWWY+PCGPLI ST S Q  +KVFD+RDGE
Sbjct: 603 RVSRTALAPLPNNTSHGRNTPACAVVPETQQWWYRPCGPLIASTGSFQSIVKVFDIRDGE 662

Query: 519 QIMKWDVQKPVLAMEYSSPLQWRNRGKVVVAEAESISLWDVNSLSPQALLSVPSGGRKIS 578
           QIMKW VQ PV A++YSSPLQWRNRGK+V+AE E+IS+WDVNSL P+A  ++ S GRKIS
Sbjct: 663 QIMKWGVQNPVSALDYSSPLQWRNRGKLVIAETEAISVWDVNSLHPEAQHTISSSGRKIS 722

Query: 579 ALHVSNTDAELGGGVRKRVSSSAAEGNDGVFCTSDSINVLDFRQPSGVGLRISKLGVNVQ 638
           A H++NTDAE+GGGVR+RVSS  AEGNDGVFCTSDSIN+LDFR PSG+G +I KLGVN Q
Sbjct: 723 AFHINNTDAEVGGGVRQRVSSLDAEGNDGVFCTSDSINILDFRNPSGIGAKIPKLGVNAQ 782

Query: 639 SVFSSGDSVFLGCTXXXXX-XXXXXXXPQVQQFSLRRQALFSTYALPESSVHSHYAAISQ 697
            V S GDSVFLGCT              QVQQFS+R+Q L STY+LP+S+ H H++AI+Q
Sbjct: 783 CVSSRGDSVFLGCTNQKSTVKKQMASSSQVQQFSIRKQRLVSTYSLPDSNSHPHHSAITQ 842

Query: 698 VWGNSDFVMAVNGLGLHVFDAQKDDPLRVLNLNMDSSSNAQSLREVVGPDDLYWPSFDYL 757
           VWGNS+FVMA +G+GL VFD  K++ L+   L  D  S  Q++RE++GP+D+Y PSFDY 
Sbjct: 843 VWGNSNFVMATSGMGLFVFDTAKEETLQQQPLTSDYGS-VQTVREIIGPNDMYCPSFDYS 901

Query: 758 GSRALLISRDRPAMWRHLI 776
           G R LLISRDRPA+WR+L+
Sbjct: 902 GCRVLLISRDRPALWRYLL 920