Miyakogusa Predicted Gene
- Lj6g3v0002280.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0002280.2 tr|G7I444|G7I444_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_1g0,27.62,1e-18,TPR-like,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,Pentatricopeptid,CUFF.57364.2
(378 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 228 5e-60
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 6e-58
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 1e-56
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 5e-56
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 7e-56
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 213 2e-55
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 2e-55
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 5e-55
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 1e-54
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 7e-48
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 7e-47
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 7e-47
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 1e-46
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 1e-46
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 7e-46
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 8e-46
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 7e-45
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 173 2e-43
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 167 1e-41
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 4e-41
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 9e-41
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 2e-39
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 3e-39
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 4e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 157 9e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 153 2e-37
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 2e-35
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 9e-35
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 6e-34
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 6e-34
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 9e-34
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 9e-34
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 136 2e-32
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 3e-31
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 7e-31
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 8e-31
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 130 2e-30
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 2e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 129 2e-30
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 129 4e-30
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 128 8e-30
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 126 3e-29
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 124 1e-28
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 6e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 4e-27
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 113 2e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 5e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 6e-25
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 110 1e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 110 2e-24
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 108 5e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 107 1e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 7e-22
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 7e-21
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 4e-20
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 92 6e-19
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 92 7e-19
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 9e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 3e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 87 3e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 6e-17
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 84 1e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 84 2e-16
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 82 6e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 81 1e-15
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 80 3e-15
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 79 8e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 78 1e-14
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 75 5e-14
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 75 6e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 74 1e-13
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 74 2e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 74 2e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 73 3e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 73 3e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 73 3e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 73 3e-13
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 73 4e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 5e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 68 8e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 67 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 2e-11
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 66 3e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 66 4e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 6e-11
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 65 7e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 65 8e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 64 1e-10
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 64 2e-10
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 64 2e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 3e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 5e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 62 6e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 7e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 61 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 59 6e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 58 9e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 57 3e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 55 8e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 54 2e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 53 3e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 53 3e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 51 1e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 206/343 (60%), Gaps = 11/343 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK + A L ++E +L +P ++IYNT+I GLCK ++ A L EM
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKL-EPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI P+VVT+SSLI C+ +W + LL++ + DV +F+ ++DA K+G L
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EM+KR + P +++Y+ L++G+C+ ++D+A+++F+ M+ PDV +YN L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+CK +RV+E M + +M + LV N VTY L GL + G A M G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG- 461
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PP++ YN +L+ LC+ L+KA +F L EP + +YNI+I G CK G+V++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++ N+ L+ + D + +I+ FC++ ++A AL+K ++
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 196/406 (48%), Gaps = 50/406 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I ++++ L + N Y+ +I+ C+ + A + +M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLG-IPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
++ G P++VT SSL+ G+CH+ + E L+++ + + +FN ++ L
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M+ +G QPD+++Y ++++G C + D A L + M + L P V YN +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK + +D+A+NL ++M TK + PN VTY L LC +GR DA L+ M R
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P P + Y+ ++ C LD+A +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F ++ + P+V +YN LI G+CK RV+E M +++ M R +V ++ T+ +LI
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 319 KRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
+ CD A ++K ++ + L+DGL KNG E A V
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 180/359 (50%), Gaps = 46/359 (12%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLC-------------- 46
+Y T++ GLCK K +A+ +E+E + ++PN+V Y+++I LC
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMET-KGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 47 ---------------------KDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ 85
K+G + +A+KL EM++R I P +VT+SSLI GFC D+
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 86 WKEVR----LLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
E + +++++ DV ++N ++ CK + E V EM +RG+ + ++Y I
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
L+ G D A+++F M+ G+ P++ +YN L+ G CK ++++AM + E +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKA 259
+ P TY + +G+C+ G++ D W+ + +G +P D+ YN ++ C + ++A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP-DVVAYNTMISGFCRKGSKEEA 555
Query: 260 NKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
+ +F + + PN YN LI ++G + + + + M D+ T L+ N
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 160/300 (53%), Gaps = 16/300 (5%)
Query: 45 LCKDGL----VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDV 100
L ++GL ++ A L EM++ FP ++ FS L+ +++ +V + L E ++
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF-DVVISLGEQMQNL 110
Query: 101 C------SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
+++I+++ C++ L A AV +M+K G +P++++ + L++GYC ++ +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
L D M G P+ ++N LI G + EAM L + M+ K P+ VTY + +G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---P 270
LC+ G A+N L +M +G P + YN I++ LC+ +H+D A +F + + P
Sbjct: 231 LCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
NV +Y+ LIS C GR +A + +M R I D TF LI+AF K + +A LY
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++G C A Q + + + P++V YNT+I G CK V + ++ EM
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLD-----VCSFNIIMDALCKQGLL 116
QRG+ + VT++ LI G A + + E D + ++N ++D LCK G
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG-K 481
Query: 117 LEAHAVCYEMIKRG-VQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
LE V +E ++R ++P + +Y I+++G C KV+ LF + G+ PDV +YN
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+I G+C+ +EA L ++M +PN+ Y L R G + + M G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 236 HRPPDLTPYNIILETLCEQHLDKA 259
D + ++ L + LDK+
Sbjct: 602 F-AGDASTIGLVTNMLHDGRLDKS 624
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 50/292 (17%)
Query: 108 DALCKQGL----LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
+ L + GL L +A A+ EM+K P +I ++ L+ K D L + M
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 164 AGLVPDVWSYNILI-----------------------------------QGYCKIERVDE 188
G+ + ++Y+ILI GYC +R+ E
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 189 AMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL 248
A+ L + M PN VT+ L GL + +A + RM +G + PDL Y +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ-PDLVTYGVVV 228
Query: 249 ETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIV 304
LC++ D A + N + EP V YN +I G CK +D+A+++++ M + I
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 305 RDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
+ T+ LI+ C + A L + N D+ F L+D K G
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 201/343 (58%), Gaps = 11/343 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++ LCKS S A+ +++E +K ++V Y+ VI LCKDG + A L +EM
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERN-IKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQW----KEVRLLLNENSL-DVCSFNIIMDALCKQGLL 116
+GI DVVT+SSLI G C+ +W K +R ++ N + DV +F+ ++D K+G L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
LEA + EMI RG+ PD I+Y L+DG+C + + +A ++FD+M+ G PD+ +Y+IL
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I YCK +RVD+ M L ++ +K L+PN +TY L G C+ G+L A M RG
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PP + Y I+L+ LC+ L+KA +IF + + YNI+I G C +VD+A
Sbjct: 452 -PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
S++ ++ + + D T+ ++I CK+ +A L++ ++
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 185/334 (55%), Gaps = 16/334 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P+ + ++T+++G C +G V++A L M++ PD+VT S+LI G C + E +
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L++ D ++ +++ LCK G A + +M +R ++ V+ Y+I++D C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
D A LF+ M G+ DV +Y+ LI G C + D+ + +M+ +N++P+ V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNS 265
T+ L D + G+L +A M RG PD YN +++ C+++ L +AN++F+
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGI-APDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 266 LIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
++ EP++ +Y+ILI+ YCK RVD+ M +++ + + ++ ++ T+ L+ FC+ +
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 323 CDKAIALYKN--NRDLCP----FKILMDGLRKNG 350
+ A L++ +R + P + IL+DGL NG
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 18/337 (5%)
Query: 51 VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNI 105
VN A L MIQ P + F+ L Q+ V + LN D+ + I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
+++ C++ LL A +V K G +PD I+++ L++G+CL+ +V +A L D M+E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
PD+ + + LI G C RV EA+ L + M+ P+ VTY + + LC+ G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISG 281
+ +M R + + Y+I++++LC+ D A +FN + + +V +Y+ LI G
Sbjct: 231 DLFRKMEERNIKAS-VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCPF 339
C +G+ D+ + + M RNI+ D TF LI+ F K + +A LY R + P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 340 KI----LMDGL-RKNGMEEVAQRVSQLYG-ACDPDVA 370
I L+DG ++N + E Q + C+PD+
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 37/296 (12%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P+ + YN++I G CK+ +++A ++ M+ +G PD+VT+S LI +C A + +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
L E S + ++N ++ C+ G L A + EM+ RGV P V++Y IL+DG
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C +++KA ++F+ M ++ + + YNI+I G C +VD+A +L + K + P+
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
VTY + GLC+ G L +A +M G P D T
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT----------------------- 562
Query: 266 LIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
YNILI + + ++ + + M + DS T K++I+ R+
Sbjct: 563 ---------YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 120/219 (54%), Gaps = 6/219 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++ CK+K + ++ +E+ + L+ PN + YNT++ G C+ G +N A++L EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ RG+ P VVT+ L+ G C + + ++ + +L + +NII+ +C +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A ++ + +GV+PDV++Y +++ G C K + +A LF M E G PD ++YNIL
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
I+ + + ++ L E+M ++ T K + D L
Sbjct: 567 IRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 223/395 (56%), Gaps = 22/395 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++GLCK A+ L+++E + ++ ++VIYNT+I GLCK ++ A L +EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI PDV T+SSLI C+ +W + LL++ + +V +F+ ++DA K+G L
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EMIKR + PD+ +Y+ L++G+C+ ++D+A+ +F++MI P+V +Y+ L
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+CK +RV+E M L +M + LV N VTY L G + +A +M G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSL---IPEPNVQSYNILISGYCKNGRVDEAM 292
P LT YNI+L+ LC+ L KA +F L EP++ +YNI+I G CK G+V++
Sbjct: 465 HPNILT-YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF-----------KI 341
++ N+ L+ + + + +I+ FC++ ++A +L K ++ P
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 342 LMDGLRKNGMEEVAQRVSQLYGACDPDVALVRNQL 376
L DG R+ E + + S + + LV N L
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 195/398 (48%), Gaps = 50/398 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I ++++ L + +L Y+ I+ C+ ++ A + ++M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLG-ISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G PD+VT SSL+ G+CH+ + + L+++ D +F ++ L
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ +M++RG QPD+++Y +++G C + +D A L M + + DV YN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK + +D+A+NL +M K + P+ TY L LC +GR DA L+ M R
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P PD+ Y+ ++ C LD+A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F +I + PNV +Y+ LI G+CK RV+E M +++ M R +V ++ T+ LI+ F
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 319 KRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
+ + CD A ++K + ++ + IL+DGL KNG
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 154/308 (50%), Gaps = 10/308 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P++V +N ++ + K L +M GI D+ T+S I FC Q +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 93 LNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
L + D+ + + +++ C + +A A+ +M++ G +PD ++T L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
K +A L D M++ G PD+ +Y ++ G CK +D A++L + M + + V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
Y + DGLC++ + DA N T M +G R PD+ Y+ ++ LC A+++ + +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIR-PDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
I PNV +++ LI + K G++ EA +Y M R+I D T+ LIN FC +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 324 DKAIALYK 331
D+A +++
Sbjct: 380 DEAKHMFE 387
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 13/282 (4%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
+ FN ++ A+ K ++ +M G+ D+ +Y+I ++ +C + ++ A +
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
M++ G PD+ + + L+ GYC +R+ +A+ L + M+ P+ T+ L GL
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSY 275
+ +A + +M RG + PDL Y ++ LC++ +D A + + E +V Y
Sbjct: 203 KASEAVALVDQMVQRGCQ-PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 276 NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--- 332
N +I G CK +D+A++++ M + I D T+ LI+ C + A L +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 333 ---NRDLCPFKILMDGLRKNGMEEVAQRV--SQLYGACDPDV 369
N ++ F L+D K G A+++ + + DPD+
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
+M+K P ++ + L+ K + L + M G+ D+++Y+I I +C+
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
++ A+ + M+ P+ VT L +G C R+ DA + +M G++P T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 245 NIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+I +A + + ++ +P++ +Y +++G CK G +D A+S+ + M
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP 338
I D + +I+ CK K D A+ L+ +N+ + P
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
KVD A LF M+++ P + +N L+ K+ + + ++L E M T + + TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
+ CR +L A L +M G+ PD+ + +L C + + A + + ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYE-PDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 269 ---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+P+ ++ LI G + + EA+++ M R D T+ ++N CKR D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 326 AIALYKN------NRDLCPFKILMDGL 346
A++L K D+ + ++DGL
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGL 268
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
IL I +VD+A++L DM+ P+ V + L + + + + +M
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 235 GHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDE 290
G DL Y+I + C + L A + ++ EP++ + + L++GYC + R+ +
Sbjct: 113 G-ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMD 344
A+++ M D+ TF LI+ + +A+AL DL + +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 345 GLRKNG 350
GL K G
Sbjct: 232 GLCKRG 237
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 209/343 (60%), Gaps = 11/343 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++GLCK A+ L+++E + ++ ++VIY T+I LC VN A L +EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI P+VVT++SLI C+ +W + LL++ + +V +F+ ++DA K+G L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EMIKR + PD+ +Y+ L++G+C+ ++D+A+ +F++MI P+V +YN L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+CK +RV+E M L +M + LV N VTY L GL + G A +M G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG- 460
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PPD+ Y+I+L+ LC+ L+KA +F L EP++ +YNI+I G CK G+V++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++ ++ L+ + + + +I+ FC++ ++A AL++ ++
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 186/403 (46%), Gaps = 50/403 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I + ++ L+ + +L YN +I+ C+ + A + +M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
++ G PD+VT SSL+ G+CH + E L++ E + +FN ++ L
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M+ RG QPD+ +Y +++G C + +D A L M + + DV Y +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I C + V++A+NL +M K + PN VTY L LC +GR DA L+ M R
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P PD+ Y+ ++ C LD+A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F +I + PNV +YN LI G+CK RV+E M +++ M R +V ++ T+ LI
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 319 KRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
+ CD A ++K D+ + IL+DGL K G E A
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 73/354 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ LC +A + L ++ + + PN+V ++ +I K+G + +A+KL EM
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCK---- 112
I+R I PD+ T+SSLI GFC D+ E + L+++++ +V ++N ++ CK
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 113 --------------------------QGLLLE-----AHAVCYEMIKRGVQPDVISYTIL 141
QGL A + +M+ GV PD+I+Y+IL
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+DG C K++KA +F+ + ++ + PD+++YNI+I+G CK +V++ +L + K +
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
PN + Y + G CR G +A M G TL
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDG--------------TL---------- 567
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
PN +YN LI ++G + + + M V D+ T ++IN
Sbjct: 568 --------PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 134/263 (50%), Gaps = 7/263 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++G C A + + EL + PN+V YNT+I G CK V + +L EM
Sbjct: 363 YSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 62 IQRGIFPDVVTFSSLIYGFCHA---DQWKEV--RLLLNENSLDVCSFNIIMDALCKQGLL 116
QRG+ + VT+++LI G A D +++ +++ + D+ +++I++D LCK G L
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A V + K ++PD+ +Y I+++G C KV+ LF + G+ P+V Y +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+C+ +EA L +M +PN+ TY L R G + + M G
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 237 RPPDLTPYNIILETLCEQHLDKA 259
D + ++++ L + L+K+
Sbjct: 602 -VGDASTISMVINMLHDGRLEKS 623
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EM++ P ++ + L+ K D L + M + D++SYNILI +C+
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
++ A+ + M+ P+ VT L +G C R+ +A + +M ++P +T
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 245 NIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+I +A + + ++ +P++ +Y +++G CK G +D A+S+ + M
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP 338
I D + +I+A C K + A+ L+ +N+ + P
Sbjct: 250 KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 129 RGVQPDVISYTI---LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
RGV SY L L K+D A LF M+++ +P + +N L+ K+ +
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
D ++L E M + + +Y L + CR +LP A L +M G+ PD+ +
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYE-PDIVTLS 154
Query: 246 IILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+L C + + +A + + + +PN ++N LI G + + EA+++ M R
Sbjct: 155 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYK 331
D T+ ++N CKR D A++L K
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLK 244
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 204/339 (60%), Gaps = 11/339 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++ +CKS + A++ L+++E +K + V Y+ +I GLCKDG ++ A L +EM
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+G D++T+++LI GFC+A +W + LL + S +V +F++++D+ K+G L
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EM++RG+ P+ I+Y L+DG+C + ++++A ++ D+MI G PD+ ++NIL
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GYCK R+D+ + L +M + ++ N VTY L G C+ G+L A M R
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
R PD+ Y I+L+ LC+ L+KA +IF + E ++ Y I+I G C +VD+A
Sbjct: 470 R-PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
++ ++ L+ + D+ + ++I+ C++ KA L++
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 200/365 (54%), Gaps = 17/365 (4%)
Query: 9 LCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP 68
C+ + A T+ ++ L +P+ VI+NT+++GLC + V++A +L M++ G P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLG-YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 69 DVVTFSSLIYGFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGLLLEAHAVC 123
++T ++L+ G C + + +L++ E + ++ +++ +CK G A +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
+M +R ++ D + Y+I++DG C +D A LF+ M G D+ +YN LI G+C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
R D+ L DM+ + + PN VT+ L D + G+L +A L M RG P +T
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT- 370
Query: 244 YNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMC 299
YN +++ C E L++A ++ + +I +P++ ++NILI+GYCK R+D+ + +++ M
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 300 LRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEE 353
LR ++ ++ T+ L+ FC+ + + A L++ D+ +KIL+DGL NG E
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 354 VAQRV 358
A +
Sbjct: 491 KALEI 495
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 171/336 (50%), Gaps = 18/336 (5%)
Query: 51 VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNI 105
+ A L +MIQ P V+ F+ L Q++ V L + + + + +I
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
+++ C+ L A + +++K G +PD + + L++G CL+C+V +A +L D M+E G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
P + + N L+ G C +V +A+ L + M+ PN VTY + + +C+ G+ A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISG 281
L +M R + D Y+II++ LC+ LD A +FN + + ++ +YN LI G
Sbjct: 249 ELLRKMEERNIK-LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCPF 339
+C GR D+ + ++M R I + TF +LI++F K + +A L K R + P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 340 KI----LMDGL-RKNGMEEVAQRVSQLYG-ACDPDV 369
I L+DG ++N +EE Q V + CDPD+
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDI 403
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 135/252 (53%), Gaps = 7/252 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ K A Q L+E+ + + PN + YN++I G CK+ + +A ++ M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
I +G PD++TF+ LI G+C A++ + L E SL + ++N ++ C+ G L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + EM+ R V+PD++SY IL+DG C +++KA ++F + ++ + D+ Y I+
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G C +VD+A +L + K + +A Y + LCR L A +M GH
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 237 RPPDLTPYNIIL 248
P +LT YNI++
Sbjct: 575 APDELT-YNILI 585
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 113/219 (51%), Gaps = 6/219 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L++G CK+ + ++ +E+ +L+ V N V YNT++ G C+ G + A+KL EM
Sbjct: 406 FNILINGYCKANRIDDGLELFREM-SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ R + PD+V++ L+ G C + ++ ++ ++ LD+ + II+ +C +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + + +GV+ D +Y I++ C K + KA LF M E G PD +YNIL
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
I+ + + A L E+M + + T K + + L
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 11/225 (4%)
Query: 136 ISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCED 195
+SY + + K D A LF MI++ +P V +N L K ++ + + LC+
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 196 MLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQ 254
M +K + + T + + CR +L A++ + ++ G+ PD +N +L LC E
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE-PDTVIFNTLLNGLCLEC 172
Query: 255 HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFK 311
+ +A ++ + ++ +P + + N L++G C NG+V +A+ + M + T+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 312 LLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDGLRKNG 350
++N CK Q A+ L + D + I++DGL K+G
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 205/347 (59%), Gaps = 11/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK A L ++EA + ++ N+VIY+TVI LCK + A L +EM
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+G+ P+V+T+SSLI C+ ++W + LL++ + +V +FN ++DA K+G L
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EMIKR + PD+ +Y+ L++G+C+ ++D+A+ +F++MI P+V +YN L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK +R+DE + L +M + LV N VTY L G + +A +M G
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P +T YN +L+ LC+ L+KA +F L EP + +YNI+I G CK G+V++
Sbjct: 467 HPNIMT-YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
++ ++ L+ + D + +I+ FC++ ++A AL++ R+ P
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 195/406 (48%), Gaps = 50/406 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K K I ++++ L + NL YN +I+ C+ ++ A L +M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G P +VT SSL+ G+CH + + L+++ D +F ++ L
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M++RG QP++++Y ++++G C + +D A L + M A + +V Y+ +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK D+A+NL +M K + PN +TY L LC + R DA L+ M R
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P PD+ Y+ ++ C LD+A
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F +I + PNV +YN LI+G+CK R+DE + +++ M R +V ++ T+ LI+ F
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 319 KRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
+ + CD A ++K + ++ + L+DGL KNG E A V
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 492
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 142/281 (50%), Gaps = 41/281 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+S LC + +A + L ++ + + PN+V +N +I K+G + +A+KL EM
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCK---- 112
I+R I PD+ T+SSLI GFC D+ E + L+++++ +V ++N +++ CK
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 113 -QGLLL------------------------------EAHAVCYEMIKRGVQPDVISYTIL 141
+G+ L A V +M+ GV P++++Y L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+DG C K++KA +F+ + + + P +++YNI+I+G CK +V++ +L + K +
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
P+ + Y + G CR G +A +M G P T
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M+K P + + L+ K D L + M G+ ++++YNILI +C+ +
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
+ A+ L M+ P+ VT L +G C R+ DA + +M G+RP +T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 246 IILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+I +A + + ++ +PN+ +Y ++++G CK G +D A ++ M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALY 330
I + + +I++ CK + D A+ L+
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLF 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
K+D A LF M+++ +P ++ +N L+ K+++ D ++L E M + N TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP- 268
L + CR ++ A L +M G+ P +T +++ + + A + + ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 269 --EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
P+ ++ LI G + + EA+++ M R + T+ +++N CKR D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 327 IAL 329
L
Sbjct: 245 FNL 247
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 204/358 (56%), Gaps = 19/358 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG ++ +CKS + A++ L+++E + +K + V Y+ +I GLCKDG ++ A L +EM
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+G D++ +++LI GFC+A +W + LL + + DV +F+ ++D K+G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EMI+RG+ PD ++YT L+DG+C + ++DKA + D+M+ G P++ ++NIL
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GYCK +D+ + L M + +V + VTY L G C G+L A M R
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
R PD+ Y I+L+ LC+ +KA +IF + E ++ YNI+I G C +VD+A
Sbjct: 454 R-PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNG 350
++ ++ L+ + D +T+ ++I CK+ +A L++ K+ DG NG
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR--------KMEEDGHSPNG 562
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 185/342 (54%), Gaps = 16/342 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P+ V ++T+I+GLC +G V++A +L M++ G P ++T ++L+ G C + + L
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 92 LLN---ENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L++ E + ++ ++ +CK G A + +M +R ++ D + Y+I++DG C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+D A LF+ M G D+ Y LI+G+C R D+ L DM+ + + P+ V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNS 265
+ L D + G+L +A M RG PD Y +++ C E LDKAN + +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
++ + PN++++NILI+GYCK +D+ + +++ M LR +V D+ T+ LI FC+ +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 323 CDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
+ A L++ D+ +KIL+DGL NG E A +
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 43/307 (14%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ G C + + + L+++ + + P++V ++ +I K+G + +A++L E
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-------------------------- 94
MIQRGI PD VT++SLI GFC +Q + +L+
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 95 -ENSL-------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
++ L D ++N ++ C+ G L A + EM+ R V+PD++SY I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
L+DG C + +KA ++F+ + ++ + D+ YNI+I G C +VD+A +L + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET-LCEQHLDKA 259
+ P+ TY + GLC+ G L +A +M GH P T YNI++ L E K+
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT-YNILIRAHLGEGDATKS 581
Query: 260 NKIFNSL 266
K+ +
Sbjct: 582 AKLIEEI 588
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 161/335 (48%), Gaps = 18/335 (5%)
Query: 52 NKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNII 106
+ A L EM + P ++ FS L Q+ V L + L ++ + +I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL 166
++ C+ L A + ++IK G +PD ++++ L++G CL+ +V +A +L D M+E G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
P + + N L+ G C +V +A+ L + M+ PN VTY + +C+ G+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGY 282
L +M R + D Y+II++ LC+ LD A +FN + + ++ Y LI G+
Sbjct: 234 LLRKMEERKIK-LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP-- 338
C GR D+ + ++M R I D F LI+ F K + +A L+K R + P
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 339 --FKILMDGLRKNGMEEVAQRVSQLY--GACDPDV 369
+ L+DG K + A + L C P++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 122/229 (53%), Gaps = 7/229 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L++G CK+ + ++ +++ +L+ V + V YNT+I G C+ G + A++L EM
Sbjct: 390 FNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ R + PD+V++ L+ G C + ++ ++ ++ LD+ +NII+ +C +
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + + +GV+PDV +Y I++ G C K + +A LF M E G P+ +YNIL
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
I+ + ++ L E++ +A T K + D L GRL ++
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKSF 616
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
+ L L + + + G +SY + + K D A LF M + P +
Sbjct: 16 RTALFLSCYGRVFSSVSDGKGK--VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLI 73
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
++ L + ++ D ++LC+ M K + N T + + CR +L A++ + ++
Sbjct: 74 DFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 232 HYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G+ PD ++ ++ LC E + +A ++ + ++ +P + + N L++G C NG+
Sbjct: 134 IKLGYE-PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKI 341
V +A+ + M + T+ ++ CK Q A+ L + D + I
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 342 LMDGLRKNG 350
++DGL K+G
Sbjct: 253 IIDGLCKDG 261
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 205/356 (57%), Gaps = 19/356 (5%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
G+L++G C+ +A+ + ++ + KP++V YN +I LCK VN A E+
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLLL 117
++GI P+VVT+++L+ G C++ +W + LL++ + +V +++ ++DA K G +L
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + EM++ + PD+++Y+ L++G CL ++D+A ++FD+M+ G + DV SYN LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
G+CK +RV++ M L +M + LV N VTY L G + G + A F ++M + G
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI- 396
Query: 238 PPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMS 293
PD+ YNI+L LC+ L+KA IF + ++ +Y +I G CK G+V+EA S
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKN 349
++ ++ L+ + D T+ +++ C + + ALY K+ +GL KN
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT--------KMKQEGLMKN 504
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 199/400 (49%), Gaps = 52/400 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K K I +++E L ++ +L +N VI+ C V+ A + +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLG-IRNDLYTFNIVINCFCCCFQVSLALSILGKM 146
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G PD VT SL+ GFC ++ + L+++ D+ ++N I+D+LCK +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 117 LEA--------------HAVCY---------------------EMIKRGVQPDVISYTIL 141
+A + V Y +MIK+ + P+VI+Y+ L
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+D + KV +A++LF+ M+ + PD+ +Y+ LI G C +R+DEA + + M++K
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKAN 260
+ + V+Y L +G C+ R+ D M RG +T YN +++ + +DKA
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT-YNTLIQGFFQAGDVDKAQ 385
Query: 261 KIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
+ F+ + P++ +YNIL+ G C NG +++A+ I+++M R + D T+ +I
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 318 CKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGM 351
CK + ++A +L+ + D+ + +M GL G+
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 177/360 (49%), Gaps = 53/360 (14%)
Query: 47 KDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW-------KEVRLLLNENSLD 99
+D +N A L S+M++ FP +V F+ L+ ++ K++ +L N D
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN--D 119
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
+ +FNI+++ C + A ++ +M+K G +PD ++ L++G+C + +V A L D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
M+E G PD+ +YN +I CK +RV++A + +++ K + PN VTY L +GLC
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 220 RLPDAWNFLTRMHYRGHRP----------------------------------PDLTPYN 245
R DA L+ M + P PD+ Y+
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 246 IILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
++ LC +D+AN++F+ ++ + +V SYN LI+G+CK RV++ M +++ M R
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
+V ++ T+ LI F + DKA + + D+ + IL+ GL NG E A
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 41/281 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++GLC S +A + L ++ + + PN++ Y+ ++ K+G V +A++L EM
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCKQGLL 116
++ I PD+VT+SSLI G C D+ E L++++ L DV S+N +++ CK +
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 117 LEAHAVCYEMIKRG-----------------------------------VQPDVISYTIL 141
+ + EM +RG + PD+ +Y IL
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+ G C +++KA +F+ M + + D+ +Y +I+G CK +V+EA +L + K L
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
P+ VTY + GLC G L + T+M G D T
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 207/347 (59%), Gaps = 11/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK A+ L+++E + ++P +VIYNT+I LC VN A L +EM
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI P+VVT++SLI C+ +W + LL++ + +V +F+ ++DA K+G L
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EMIKR + PD+ +Y+ L++G+C+ ++D+A+ +F++MI P+V +YN L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+CK +RVDE M L +M + LV N VTY L G + +A +M G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG- 461
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PD+ Y+I+L+ LC ++ A +F L EP++ +YNI+I G CK G+V++
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
++ ++ L+ + + T+ +++ FC++ ++A AL++ ++ P
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 193/369 (52%), Gaps = 17/369 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++ C+ A+ L ++ L +P++V N++++G C ++ A L +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
++ G PD TF++LI+G ++ E R+++ D+ ++ I+++ LCK+G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A ++ +M + ++P V+ Y ++D C V+ A LF M G+ P+V +YN L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+ C R +A L DM+ + + PN VT+ L D + G+L +A M R
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
PD+ Y+ ++ C LD+A +F +I + PNV +YN LI G+CK RVDE M
Sbjct: 358 -DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN------RDLCPFKILMDGL 346
+++ M R +V ++ T+ LI+ F + ++CD A ++K D+ + IL+DGL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 347 RKNGMEEVA 355
NG E A
Sbjct: 477 CNNGKVETA 485
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 176/323 (54%), Gaps = 11/323 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ LC +A + L ++ + + PN+V ++ +I K+G + +A+KL EM
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCKQGLL 116
I+R I PD+ T+SSLI GFC D+ E + L+++++ +V ++N ++ CK +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
E + EM +RG+ + ++YT L+ G+ + D A+ +F M+ G++PD+ +Y+IL
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G C +V+ A+ + E + + P+ TY + +G+C+ G++ D W+ + +G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 237 RPPDLTPYNIILETLCEQHL-DKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAM 292
+P ++ Y ++ C + L ++A+ +F + P P+ +YN LI + ++G +
Sbjct: 533 KP-NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 293 SIYQNMCLRNIVRDSETFKLLIN 315
+ + M V D+ T L+ N
Sbjct: 592 ELIREMRSCRFVGDASTIGLVTN 614
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
+M+K P ++ ++ L+ K D L + M G+ ++++Y+ILI +C+
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
++ A+ + M+ P+ VT L +G C R+ DA + + +M G++P T
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 245 NIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+I +A + + ++ +P++ +Y I+++G CK G +D A+S+ + M
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP 338
I + +I+A C K + A+ L+ +N+ + P
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
K+D A LF M+++ P + ++ L+ K+ + D ++L E M + N TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
L + CR +L A L +M G+ PD+ N +L C + A + ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYE-PDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 269 ---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+P+ ++N LI G ++ R EA+++ M ++ D T+ +++N CKR D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 326 AIALYK 331
A++L K
Sbjct: 240 ALSLLK 245
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 198/338 (58%), Gaps = 14/338 (4%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
+L++G C+ +AI + ++E + +P++VIYNT+I G CK GLVN A +L M
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGF-RPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLLL 117
+ G+ D VT++SL+ G C + +W + L+ + + +V +F ++D K+G
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + EM +R V PDV +Y L++G C+ +VD+A+++ D+M+ G +PDV +YN LI
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
G+CK +RVDE L +M + LV + +TY + G + GR A +RM R
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--- 378
Query: 238 PPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
P++ Y+I+L LC ++KA +F ++ E ++ +YNI+I G CK G V++A
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+++++ + + D ++ +I+ FC+++Q DK+ LY+
Sbjct: 438 LFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 181/371 (48%), Gaps = 41/371 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++S + KSK I +E + +L YN VI+ LC+ A + +M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCG-IGHDLYSYNIVINCLCRCSRFVIALSVVGKM 130
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQ-WKEVRLLLNENSL----DVCSFNIIMDALCKQGLL 116
++ G PDVVT SSLI GFC ++ + + L+ + DV +N I+D CK GL+
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 190
Query: 117 --------------LEAHAVCY---------------------EMIKRGVQPDVISYTIL 141
+ A AV Y +M+ R + P+VI++T +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+D + + K +A KL++ M + PDV++YN LI G C RVDEA + + M+TK
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
+P+ VTY L +G C+ R+ + M RG +T II D A +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
IF+ + PN+++Y+IL+ G C N RV++A+ +++NM I D T+ ++I+ CK
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 322 QCDKAIALYKN 332
+ A L+++
Sbjct: 431 NVEDAWDLFRS 441
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 14/313 (4%)
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQG 114
+MIQ P +V FS ++ + + V L + + D+ S+NI+++ LC+
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ A +V +M+K G +PDV++ + L++G+C +V A L M E G PDV YN
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+I G CKI V++A+ L + M + +AVTY L GLC GR DA + M R
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 235 GHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
P +T +I + E +A K++ + +P+V +YN LI+G C +GRVDEA
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDG 345
+ M + + D T+ LIN FCK K+ D+ L++ D + ++ G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 346 LRKNGMEEVAQRV 358
+ G + AQ +
Sbjct: 359 YFQAGRPDAAQEI 371
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 100/174 (57%), Gaps = 13/174 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++G CKSK + +E+ LV + + YNT+I G + G + AQ++ S M
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVG-DTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWK-EVRLLLNEN------SLDVCSFNIIMDALCKQG 114
R P++ T+S L+YG C W+ E L+L EN LD+ ++NI++ +CK G
Sbjct: 376 DSR---PNIRTYSILLYGLCM--NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
+ +A + + +G++PDV+SYT ++ G+C K + DK+ L+ M E GL+P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++GLC A Q L +L + P++V YNT+I+G CK V++ KL EM
Sbjct: 282 YNSLINGLCMHGRVDEAKQML-DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN--ENSLDVCSFNIIMDALCKQGLLLEA 119
QRG+ D +T++++I G+ A + + + + ++ ++ +++I++ LC + +A
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ M K ++ D+ +Y I++ G C V+ A LF + GL PDV SY +I G
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 180 YCKIERVDEAMNLCEDMLTKNLVP 203
+C+ + D++ L M L+P
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 199/344 (57%), Gaps = 12/344 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++++G+C+S + A+ L+++E VK ++ Y+T+I LC+DG ++ A L EM
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
+GI VVT++SL+ G C A +W + LLL E +V +FN+++D K+G L
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ + EMI RG+ P++I+Y LMDGYC++ ++ +A + D+M+ PD+ ++ L
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+GYC ++RVD+ M + ++ + LV NAVTY L G C+ G++ A M G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PD+ Y I+L+ LC+ L+KA +IF L + Y +I G CK G+V++A
Sbjct: 435 -LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA-IALYKNNRD 335
+++ ++ + + + T+ ++I+ CK+ +A I L K D
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 194/386 (50%), Gaps = 17/386 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ S + ++K + ++LE L + N+ N +I+ C+ A + ++
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLE-LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 149
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
++ G PD TF++LI G + E R++ N DV ++N I++ +C+ G
Sbjct: 150 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 209
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + +M +R V+ DV +Y+ ++D C +D A LF M G+ V +YN L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
++G CK + ++ L +DM+++ +VPN +T+ L D + G+L +A M RG
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 237 RPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P++ YN +++ C Q+ L +AN + + ++ P++ ++ LI GYC RVD+ M
Sbjct: 330 -SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN------RDLCPFKILMDGL 346
+++N+ R +V ++ T+ +L+ FC+ + A L++ D+ + IL+DGL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 347 RKNGMEEVAQRVSQLYGACDPDVALV 372
NG E A + + D+ +V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIV 474
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 157/307 (51%), Gaps = 45/307 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ GLCK+ + L+++ + ++V PN++ +N ++ K+G + +A +L EM
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL-----NENSLDVCSFNIIMDALC----- 111
I RGI P+++T+++L+ G+C ++ E +L N+ S D+ +F ++ C
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 112 -----------KQGLLLEAHAVCY---------------------EMIKRGVQPDVISYT 139
K+GL+ A+AV Y EM+ GV PDV++Y
Sbjct: 385 DDGMKVFRNISKRGLV--ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
IL+DG C K++KA ++F+ + ++ + + Y +I+G CK +V++A NL + K
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA 259
+ PN +TY + GLC+ G L +A L +M G+ P D T +I L + L +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 260 NKIFNSL 266
K+ +
Sbjct: 563 AKLIEEM 569
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +L+ G C K + ++ + + LV N V Y+ ++ G C+ G + A++L EM
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLV-ANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWK---EVRLLLNENSLD--VCSFNIIMDALCKQGLL 116
+ G+ PDV+T+ L+ G C + + E+ L ++ +D + + I++ +CK G +
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + + +GV+P+V++YT+++ G C K + +A L M E G P+ +YN L
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
I+ + + + + L E+M + +A + K + D L
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 193/343 (56%), Gaps = 15/343 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++G+CK + +A+ L ++E +KP++VIY+ +I LCKDG + AQ L SEM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
+++GI P+V T++ +I GFC +W + + LL E + DV +FN ++ A K+G L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA +C EM+ R + PD ++Y ++ G+C + D A+ +FD+M PDV ++N +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I YC+ +RVDE M L ++ + LV N TY L G C L A + M G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG- 497
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PD NI+L CE + L++A ++F + + +YNI+I G CK +VDEA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++ ++ + + D +T+ ++I+ FC + A L+ +D
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 176/319 (55%), Gaps = 7/319 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ G C +A + L+++ + + P+++ +N +I K+G + +A+KLC EM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-ENSLDVCSFNIIMDALCKQGLLLEAH 120
+ R IFPD VT++S+IYGFC +++ + + + + S DV +FN I+D C+ + E
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+ E+ +RG+ + +Y L+ G+C ++ A+ LF MI G+ PD + NIL+ G+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
C+ E+++EA+ L E + + + V Y + G+C+ ++ +AW+ + G PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPD 571
Query: 241 LTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
+ YN+++ C + + AN +F+ + EP+ +YN LI G K G +D+++ +
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 297 NMCLRNIVRDSETFKLLIN 315
M D+ T K++ +
Sbjct: 632 EMRSNGFSGDAFTIKMVAD 650
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 184/360 (51%), Gaps = 26/360 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS-- 59
+ L+ C ++ T +L L +P++V +NT++HGLC + +++A L
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 60 -------------EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVC 101
+M++ G+ P V+TF++LI G C + E L+N+ +DV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
++ I++ +CK G A + +M + ++PDV+ Y+ ++D C A+ LF M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+E G+ P+V++YN +I G+C R +A L DM+ + + P+ +T+ L + G+L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPEPNVQSYNILIS 280
+A M +R PD YN ++ C+ + D A +F+ L+ P+V ++N +I
Sbjct: 383 FEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVTFNTIID 440
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP 338
YC+ RVDE M + + + R +V ++ T+ LI+ FC+ + A L++ + +CP
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 125/230 (54%), Gaps = 7/230 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T++ C++K +Q L+E+ LV N YNT+IHG C+ +N AQ L EM
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLL-----LNENSLDVCSFNIIMDALCKQGLL 116
I G+ PD +T + L+YGFC ++ +E L +++ LD ++NII+ +CK +
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + + GV+PDV +Y +++ G+C K + A LF M + G PD +YN L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
I+G K +D+++ L +M + +A T K + D L GRL +++
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKSFS 662
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 29/197 (14%)
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+++S+NILI+ +C ++ +++ + P+ VT+ L GLC R+ +A
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKN 285
M E +A +F+ ++ P V ++N LI+G C
Sbjct: 200 GYM--------------------VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPF 339
GRV EA ++ M + + D T+ ++N CK A+ L D+ +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 340 KILMDGLRKNGMEEVAQ 356
++D L K+G AQ
Sbjct: 300 SAIIDRLCKDGHHSDAQ 316
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 199/339 (58%), Gaps = 11/339 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++ +CKS + A++ L+++E +K + V Y+ +I GLCK G ++ A L +EM
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI +++T++ LI GFC+A +W + LL + + +V +F++++D+ K+G L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EMI RG+ PD I+YT L+DG+C + +DKA ++ D+M+ G P++ ++NIL
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GYCK R+D+ + L M + +V + VTY L G C G+L A M R
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-K 468
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PP++ Y I+L+ LC+ +KA +IF + E ++ YNI+I G C +VD+A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
++ ++ L+ + +T+ ++I CK+ +A L++
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 199/344 (57%), Gaps = 16/344 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+PN + ++T+I+GLC +G V++A +L M++ G PD++T ++L+ G C + + E L
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L+++ + ++ +++ +CK G A + +M +R ++ D + Y+I++DG C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+D A LF+ M G+ ++ +YNILI G+C R D+ L DM+ + + PN V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNS 265
T+ L D + G+L +A M +RG PD Y +++ C E HLDKAN++ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGI-APDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 266 LIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
++ +PN++++NILI+GYCK R+D+ + +++ M LR +V D+ T+ LI FC+ +
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 323 CDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRVSQ 360
+ A L++ +R + P +KIL+DGL NG E A + +
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 179/344 (52%), Gaps = 22/344 (6%)
Query: 47 KDGLVN----KAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL---- 98
+ GLV+ A L +MI P V+ FS L Q+ V L + L
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 99 -DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
++ + +I+++ C+ L A + ++IK G +P+ I+++ L++G CL+ +V +A +L
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
D M+E G PD+ + N L+ G C + EAM L + M+ PNAVTY + + +C+
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQ 273
G+ A L +M R + D Y+II++ LC+ LD A +FN + + N+
Sbjct: 241 SGQTALAMELLRKMEERNIK-LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN- 332
+YNILI G+C GR D+ + ++M R I + TF +LI++F K + +A L+K
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 333 -NRDLCPFKI----LMDGL-RKNGMEEVAQRVSQLYG-ACDPDV 369
+R + P I L+DG ++N +++ Q V + CDP++
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 124/225 (55%), Gaps = 6/225 (2%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P+ + Y ++I G CK+ ++KA ++ M+ +G P++ TF+ LI G+C A++ +
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 423
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
L + SL D ++N ++ C+ G L A + EM+ R V P++++Y IL+DG
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + +KA ++F+ + ++ + D+ YNI+I G C +VD+A +L + K + P
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET 250
TY + GLC+ G L +A +M GH P T YNI++
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT-YNILIRA 587
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 7/229 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L++G CK+ + ++ +++ +L+ V + V YNT+I G C+ G +N A++L EM
Sbjct: 406 FNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ R + P++VT+ L+ G C + ++ ++ ++ LD+ +NII+ +C +
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + + +GV+P V +Y I++ G C K + +A LF M E G PD W+YNIL
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
I+ + +++ L E++ +A T K + D L GRL ++
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSF 632
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 136 ISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCED 195
+SY + + K D A LF MI + +P V ++ L K ++ D + LC+
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 196 MLTKNLV-----------------------------------PNAVTYKYLFDGLCRFGR 220
M K + PN +T+ L +GLC GR
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 221 LPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLD-KANKIFNSLIP---EPNVQSYN 276
+ +A + RM GH+ PDL N ++ LC + +A + + ++ +PN +Y
Sbjct: 174 VSEALELVDRMVEMGHK-PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 277 ILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+++ CK+G+ AM + + M RNI D+ + ++I+ CK D A L+
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 193/343 (56%), Gaps = 15/343 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++G+CK + +A+ L ++E +KP++VIY+ +I LCKDG + AQ L SEM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
+++GI P+V T++ +I GFC +W + + LL E + DV +FN ++ A K+G L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA +C EM+ R + PD ++Y ++ G+C + D A+ +FD+M PDV ++N +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I YC+ +RVDE M L ++ + LV N TY L G C L A + M G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG- 497
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PD NI+L CE + L++A ++F + + +YNI+I G CK +VDEA
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++ ++ + + D +T+ ++I+ FC + A L+ +D
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 176/323 (54%), Gaps = 7/323 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ G C +A + L+++ + + P+++ +N +I K+G + +A+KLC EM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-ENSLDVCSFNIIMDALCKQGLLLEAH 120
+ R IFPD VT++S+IYGFC +++ + + + + S DV +FN I+D C+ + E
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+ E+ +RG+ + +Y L+ G+C ++ A+ LF MI G+ PD + NIL+ G+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
C+ E+++EA+ L E + + + V Y + G+C+ ++ +AW+ + G PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPD 571
Query: 241 LTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
+ YN+++ C + + AN +F+ + EP+ +YN LI G K G +D+++ +
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 297 NMCLRNIVRDSETFKLLINAFCK 319
M D+ T K+ C+
Sbjct: 632 EMRSNGFSGDAFTIKMAEEIICR 654
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 184/360 (51%), Gaps = 26/360 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS-- 59
+ L+ C ++ T +L L +P++V +NT++HGLC + +++A L
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 60 -------------EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVC 101
+M++ G+ P V+TF++LI G C + E L+N+ +DV
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
++ I++ +CK G A + +M + ++PDV+ Y+ ++D C A+ LF M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+E G+ P+V++YN +I G+C R +A L DM+ + + P+ +T+ L + G+L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPEPNVQSYNILIS 280
+A M +R PD YN ++ C+ + D A +F+ L+ P+V ++N +I
Sbjct: 383 FEAEKLCDEMLHRC-IFPDTVTYNSMIYGFCKHNRFDDAKHMFD-LMASPDVVTFNTIID 440
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP 338
YC+ RVDE M + + + R +V ++ T+ LI+ FC+ + A L++ + +CP
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 43/223 (19%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T++ C++K +Q L+E+ LV N YNT+IHG C+ +N AQ L EM
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-------------------------------- 89
I G+ PD +T + L+YGFC ++ +E
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 90 --------RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
L ++ DV ++N+++ C + + +A+ + ++M G +PD +Y L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 142 MDGYCLKC-KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
+ G CLK ++DK+ +L M G D ++ + + C++
Sbjct: 614 IRG-CLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 152 DKARKLFDMMIEAGLVP-DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
D A L+ M E +P +++S+NILI+ +C ++ +++ + P+ VT+
Sbjct: 123 DVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNT 181
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP-- 268
L GLC R+ +A M E +A +F+ ++
Sbjct: 182 LLHGLCLEDRISEALALFGYM--------------------VETGFLEAVALFDQMVEIG 221
Query: 269 -EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
P V ++N LI+G C GRV EA ++ M + + D T+ ++N CK A+
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 328 ALYKN------NRDLCPFKILMDGLRKNGMEEVAQ 356
L D+ + ++D L K+G AQ
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 199/343 (58%), Gaps = 11/343 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G+L++G C+ +A+ ++ + KPN+VIYNT+I GLCK V+ A L + M
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
+ GI PDVVT++SLI G C + +W + +++ E DV +FN ++DA K+G +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA EMI+R + PD+++Y++L+ G C+ ++D+A ++F M+ G PDV +Y+IL
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GYCK ++V+ M L +M + +V N VTY L G CR G+L A RM + G
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P++ YN++L LC+ ++KA I + + ++ +YNI+I G CK G V +A
Sbjct: 393 H-PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
IY ++ + ++ D T+ ++ K+ +A AL++ ++
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 185/369 (50%), Gaps = 19/369 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K K I ++++ L + NL N +++ C+ ++ A +M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLG-IPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
I+ G P +VTF SL+ GFC D+ + + ++ +V +N I+D LCK +
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQV 202
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + M K G+ PDV++Y L+ G C + A ++ M + + PDV+++N L
Sbjct: 203 DNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I K RV EA E+M+ ++L P+ VTY L GLC + RL +A M +G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC 322
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PD+ Y+I++ C+ + ++ K+F + N +Y ILI GYC+ G+++ A
Sbjct: 323 F-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGL 346
I++ M + + T+ +L++ C + +KA+ + + + D+ + I++ G+
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 347 RKNGMEEVA 355
K G EVA
Sbjct: 442 CKAG--EVA 448
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 168/345 (48%), Gaps = 49/345 (14%)
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQG 114
M+Q P + FS L+ ++ V L + + ++C+ NI+++ C+
Sbjct: 71 HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS 130
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
L A + +MIK G +P ++++ L++G+C +V A +FD M+ G P+V YN
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+I G CK ++VD A++L M + P+ VTY L GLC GR DA ++ M R
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 235 GHRP----------------------------------PDLTPYNIILETLC-EQHLDKA 259
P PD+ Y++++ LC LD+A
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 260 NKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++F ++ + P+V +Y+ILI+GYCK+ +V+ M ++ M R +VR++ T+ +LI
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 317 FCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
+C+ + + A +++ + ++ + +L+ GL NG E A
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 76/313 (24%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLC-------------- 46
+Y T++ GLCKSK NA+ L +E + P++V YN++I GLC
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEK-DGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 47 ---------------------KDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ 85
K+G V++A++ EMI+R + PD+VT+S LIYG C +
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 86 WKEVR----LLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
E ++++ DV +++I+++ CK + + EM +RGV + ++YTI
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVP-------------------------------- 168
L+ GYC K++ A ++F M+ G+ P
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 169 ---DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
D+ +YNI+I+G CK V +A ++ + + L+P+ TY + GL + G +A
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 226 NFLTRMHYRGHRP 238
+M G P
Sbjct: 487 ALFRKMKEDGILP 499
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 12/211 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVK---PNLVIYNTVIHGLCKDGLVNKAQKLC 58
Y L+ GLC + + +E+ + K P++V Y+ +I+G CK V KL
Sbjct: 294 YSLLIYGLCMY----SRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQW---KEV--RLLLNENSLDVCSFNIIMDALCKQ 113
EM QRG+ + VT++ LI G+C A + +E+ R++ ++ ++N+++ LC
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G + +A + +M K G+ D+++Y I++ G C +V A ++ + GL+PD+W+Y
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
++ G K EA L M ++PN
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 19/262 (7%)
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
+ M++ P + ++ L+ K D L++ M G+ ++ + NIL+ +C+
Sbjct: 70 FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRC 129
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
++ A++ M+ P+ VT+ L +G CR R+ DA +M G++ P++
Sbjct: 130 SQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK-PNVVI 188
Query: 244 YNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMC 299
YN I++ LC+ + +D A + N + + P+V +YN LISG C +GR +A + M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 300 LRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEE 353
R I D TF LI+A K + +A Y+ + D+ + +L+ GL M
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL---CMYS 305
Query: 354 VAQRVSQLYG-----ACDPDVA 370
+++G C PDV
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVV 327
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 201/347 (57%), Gaps = 11/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK + A+ L ++EA + ++ ++VI+NT+I LCK V+ A L EM
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI P+VVT+SSLI C +W + LL++ + ++ +FN ++DA K+G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + +MIKR + PD+ +Y L++G+C+ ++DKA+++F+ M+ PDV +YN L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+CK +RV++ L +M + LV + VTY L GL G +A +M G
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG- 465
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PPD+ Y+I+L+ LC L+KA ++F+ + ++ Y +I G CK G+VD+
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
++ ++ L+ + + T+ +I+ C ++ +A AL K ++ P
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 50/406 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K K I ++++ L++V L YN +I+ C+ ++ A L +M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRSQISLALALLGKM 146
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G P +VT SSL+ G+CH + + L+++ D +F ++ L
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M++RG QP++++Y ++++G C + D A L + M A + DV +N +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK VD+A+NL ++M TK + PN VTY L LC +GR DA L+ M +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P PD+ YN ++ C LDKA +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F ++ + P+V +YN LI G+CK+ RV++ +++ M R +V D+ T+ LI
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 319 KRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
CD A ++K D+ + IL+DGL NG E A V
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 163/354 (46%), Gaps = 73/354 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+S LC +A Q L ++ + + PNLV +N +I K+G +A+KL +M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCK---- 112
I+R I PD+ T++SL+ GFC D+ + + +++++ DV ++N ++ CK
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 113 --------------------------QGLLLE-----AHAVCYEMIKRGVQPDVISYTIL 141
QGL + A V +M+ GV PD+++Y+IL
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+DG C K++KA ++FD M ++ + D++ Y +I+G CK +VD+ +L + K +
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
PN VTY + GLC L +A+ L +M G
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG-------------------------- 570
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
P PN +YN LI + ++G + + + M V D+ T L+ N
Sbjct: 571 ------PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M+K P ++ + L+ K D L + M +V +++YNILI +C+ +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
+ A+ L M+ P+ VT L +G C R+ DA + +M G+RP +T
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 246 IILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+I +A + + ++ +PN+ +Y ++++G CK G D A+++ M
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYK 331
I D F +I++ CK + D A+ L+K
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFK 284
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 202/347 (58%), Gaps = 11/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK A+ L ++E + ++ ++VIY+TVI LCK V+ A L +EM
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI PDV T+SSLI C+ +W + LL++ + +V +FN ++DA K+G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EMI+R + P++++Y L++G+C+ ++D+A+++F +M+ +PDV +YN L
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK ++V + M L DM + LV N VTY L G + +A +M G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P +T YN +L+ LC+ L+KA +F L EP++ +YNI+ G CK G+V++
Sbjct: 447 HPNIMT-YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
++ ++ L+ + D + +I+ FCK+ ++A L+ ++ P
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 200/385 (51%), Gaps = 19/385 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++ LC+ A+ L ++ L P++V N++++G C +++A L +M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGY-GPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
++ G PD VTF++L++G ++ E R+++ D+ ++ +++ LCK+G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + +M K ++ DV+ Y+ ++D C VD A LF M G+ PDV++Y+ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I C R +A L DML + + PN VT+ L D + G+L +A M R
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS- 340
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
P++ YN ++ C LD+A +IF ++ + P+V +YN LI+G+CK +V + M
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGL 346
++++M R +V ++ T+ LI+ F + CD A ++K + ++ + L+DGL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 347 RKNGMEEVAQRVSQLY--GACDPDV 369
KNG E A V + +PD+
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDI 485
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 180/339 (53%), Gaps = 9/339 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K K I +++E L V NL YN +I+ LC+ ++ A + +M
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILG-VSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G P +VT +SL+ GFCH ++ E L+++ D +F ++ L +
Sbjct: 127 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 186
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M+ +G QPD+++Y +++G C + + D A L + M + + DV Y+ +
Sbjct: 187 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK VD+A+NL +M K + P+ TY L LC +GR DA L+ M R
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
P +T ++I E L +A K+F+ +I +PN+ +YN LI+G+C + R+DEA
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
I+ M ++ + D T+ LIN FCK K+ + L+++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 182/323 (56%), Gaps = 11/323 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+S LC +A + L ++ + + PN+V +N++I K+G + +A+KL EM
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCKQGLL 116
IQR I P++VT++SLI GFC D+ E + L+++++ L DV ++N +++ CK +
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
++ + +M +RG+ + ++YT L+ G+ D A+ +F M+ G+ P++ +YN L
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G CK ++++AM + E + + P+ TY + +G+C+ G++ D W+ + +G
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 237 RPPDLTPYNIILETLCEQHL-DKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAM 292
+P D+ YN ++ C++ L ++A +F + P P+ +YN LI + ++G +
Sbjct: 517 KP-DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 575
Query: 293 SIYQNMCLRNIVRDSETFKLLIN 315
+ + M D+ T+ L+ +
Sbjct: 576 ELIKEMRSCRFAGDASTYGLVTD 598
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 184/372 (49%), Gaps = 31/372 (8%)
Query: 28 LQLVKPNLVIYNTVIHGLCKDGL-------------VNKAQKLCSEMIQRGIFPDVVTFS 74
L+ P+ + GL DG +++A L EM++ FP +V FS
Sbjct: 10 LRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFS 69
Query: 75 SLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKR 129
L+ ++ V ++ + S ++ ++NI+++ LC++ L A A+ +M+K
Sbjct: 70 KLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL 129
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G P +++ L++G+C ++ +A L D M+E G PD ++ L+ G + + EA
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
+ L E M+ K P+ VTY + +GLC+ G A N L +M +G D+ Y+ +++
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYSTVID 248
Query: 250 TLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
+LC+ +H+D A +F + + P+V +Y+ LIS C GR +A + +M R I
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 306 DSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRVS 359
+ TF LI+AF K + +A L+ R + P + L++G + + AQ++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 360 QLYGA--CDPDV 369
L + C PDV
Sbjct: 369 TLMVSKDCLPDV 380
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++G CK+K + ++ +++ LV N V Y T+IHG + + AQ + +M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVG-NTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLL 116
+ G+ P+++T+++L+ G C + ++ ++ ++ D+ ++NI+ + +CK G +
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + + +GV+PDVI+Y ++ G+C K ++A LF M E G +PD +YN L
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
I+ + + + L ++M + +A TY + D + GRL +
Sbjct: 562 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRLDKGF 609
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 199/347 (57%), Gaps = 11/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK A L ++EA + ++ ++VI+NT+I LCK V+ A L EM
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI P+VVT+SSLI C +W + LL++ + ++ +FN ++DA K+G
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + +MIKR + PD+ +Y L++G+C+ ++DKA+++F+ M+ PD+ +YN L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+CK +RV++ L +M + LV + VTY L GL G +A +M G
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG- 390
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PPD+ Y+I+L+ LC L+KA ++F+ + ++ Y +I G CK G+VD+
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
++ ++ L+ + + T+ +I+ C ++ +A AL K ++ P
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 194/406 (47%), Gaps = 50/406 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K K I ++++ L + NL YN +I+ C+ ++ A L +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLG-ISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G P +VT SSL+ G+CH + + L+++ D +F ++ L
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M++RG QP++++Y ++++G C + +D A L + M A + DV +N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK VD+A+NL ++M TK + PN VTY L LC +GR DA L+ M +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P PD+ YN ++ C LDKA +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F ++ + P++ +YN LI G+CK+ RV++ +++ M R +V D+ T+ LI
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 319 KRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
CD A ++K D+ + IL+DGL NG E A V
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 46/300 (15%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+S LC +A Q L ++ + + PNLV +N +I K+G +A+KL +M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCK---- 112
I+R I PD+ T++SLI GFC D+ + + +++++ D+ ++N ++ CK
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 113 --------------------------QGLLLE-----AHAVCYEMIKRGVQPDVISYTIL 141
QGL + A V +M+ GV PD+++Y+IL
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+DG C K++KA ++FD M ++ + D++ Y +I+G CK +VD+ +L + K +
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
PN VTY + GLC L +A+ L +M G PD YN TL HL +K
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYN----TLIRAHLRDGDK 516
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 118/229 (51%), Gaps = 7/229 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ G CKSK + + +E+ LV + V Y T+I GL DG + AQK+ +M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLV-GDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
+ G+ PD++T+S L+ G C+ + ++ + + E LD+ + +++ +CK G +
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + + +GV+P+V++Y ++ G C K + +A L M E G +PD +YN L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
I+ + + + L +M + V +A T L + GRL ++
Sbjct: 507 IRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 554
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M+K P + + L+ K D L + M G+ ++++YNILI +C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
+ A+ L M+ P+ VT L +G C R+ DA + +M G+RP +T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 246 IILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+I +A + + ++ +PN+ +Y ++++G CK G +D A ++ M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYK 331
I D F +I++ CK + D A+ L+K
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFK 209
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 208/373 (55%), Gaps = 20/373 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +L++G C A+ + ++ + +KP++V+Y T+I LCK+G VN A L +M
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVEMG-IKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
GI PDVV ++SL+ G C++ +W++ LL + DV +FN ++DA K+G
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
L+A + EMI+ + P++ +YT L++G+C++ VD+AR++F +M G PDV +Y L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK ++VD+AM + +M K L N +TY L G + G+ A + M RG
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG- 382
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE------PNVQSYNILISGYCKNGRVD 289
PP++ YN++L LC + KA IF + PN+ +YN+L+ G C NG+++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILM 343
+A+ ++++M R + T+ ++I CK + A+ L+ + ++ + ++
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 344 DGLRKNGMEEVAQ 356
GL + G++ A
Sbjct: 503 SGLFREGLKHEAH 515
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 162/322 (50%), Gaps = 16/322 (4%)
Query: 52 NKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNII 106
N+A L + M++ P ++ F+ L+ ++ V L + S D+ + N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL 166
M+ C+ A + +M+K G +PD++++T L++G+CL ++++A + + M+E G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
PDV Y +I CK V+ A++L + M + P+ V Y L +GLC GR DA +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGY 282
L M R + PD+ +N +++ E A +++N +I PN+ +Y LI+G+
Sbjct: 234 LLRGMTKRKIK-PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDL 336
C G VDEA ++ M + D + LIN FCK K+ D A+ ++ +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 337 CPFKILMDGLRKNGMEEVAQRV 358
+ L+ G + G VAQ V
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEV 374
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 173/348 (49%), Gaps = 19/348 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V +L N +++ C+ A +M++ G PD+VTF+SLI GFC ++ +E
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
++N+ DV + I+D+LCK G + A ++ +M G++PDV+ YT L++G
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + A L M + + PDV ++N LI + K + +A L +M+ ++ PN
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFN 264
TY L +G C G + +A M +G PD+ Y ++ C+ + +D A KIF
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 265 SLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+ + N +Y LI G+ + G+ + A ++ +M R + + T+ +L++ C
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 322 QCDKAIALYKNNR---------DLCPFKILMDGLRKNGMEEVAQRVSQ 360
+ KA+ ++++ + ++ + +L+ GL NG E A V +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 134/276 (48%), Gaps = 40/276 (14%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ PN+ Y ++I+G C +G V++A+++ M +G FPDVV ++SLI GFC + +
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ E S + ++ ++ + G A V M+ RGV P++ +Y +L+
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 146 CLKCKVDKARKLFDMMIEA---GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
C KV KA +F+ M + G+ P++W+YN+L+ G C ++++A+ + EDM + +
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
+TY + G+C+ G++ +A N + +G +
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK------------------------- 492
Query: 263 FNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
PNV +Y +ISG + G EA +++ M
Sbjct: 493 -------PNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++G CK K +A++ E+ L N + Y T+I G + G N AQ++ S M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTG-NTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN--------SLDVCSFNIIMDALCKQ 113
+ RG+ P++ T++ L++ C+ + K+ ++ + + ++ ++N+++ LC
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 114 GLLLEAHAVCYEMIKR-----------------------------------GVQPDVISY 138
G L +A V +M KR GV+P+V++Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 139 TILMDGYCLKCKVDKARKLFDMMIEAGL 166
T ++ G + +A LF M E G+
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 197/343 (57%), Gaps = 14/343 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++GLCK A+ L ++EA + +K N+VI+NT+I LCK V A L +EM
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-RLLLN--ENSLD--VCSFNIIMDALCKQGLL 116
+GI P+VVT++SLI C+ +W + RLL N E ++ V +FN ++DA K+G L
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + EMI+R + PD I+Y +L++G+C+ ++D+A+++F M+ +P++ +YN L
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTL 404
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK +RV++ + L +M + LV N VTY + G + G A +M
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM-VSNR 463
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P D+ Y+I+L LC LD A IF L E N+ YN +I G CK G+V EA
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++ C +I D T+ +I+ C ++ +A L++ ++
Sbjct: 524 DLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 198/403 (49%), Gaps = 50/403 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I ++++ L + +L Y+ I+ C+ ++ A + ++M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLG-ISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G PD+VT SSL+ G+CH+ + + L+++ D +F ++ L
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ +M++RG QPD+++Y +++G C + +D A L + M A + +V +N +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK V+ A++L +M TK + PN VTY L + LC +GR DA L+ M +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 237 RP----------------------------------PDLTPYNIILETLC-EQHLDKANK 261
P PD YN+++ C LD+A +
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+F ++ + PN+Q+YN LI+G+CK RV++ + +++ M R +V ++ T+ +I F
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 319 KRKQCDKAIALYK---NNR---DLCPFKILMDGLRKNGMEEVA 355
+ CD A ++K +NR D+ + IL+ GL G + A
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 156/308 (50%), Gaps = 10/308 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P++V +N ++ + K L +M GI D+ T+S I FC Q +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 93 LNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
L + D+ + + +++ C + +A A+ +M++ G +PD ++T L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
K +A L D M++ G PD+ +Y ++ G CK +D A+NL M + N V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
+ + D LC++ + A + T M +G R P++ YN ++ LC A+++ +++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIR-PNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ + PNV ++N LI + K G++ EA +++ M R+I D+ T+ LLIN FC +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 324 DKAIALYK 331
D+A ++K
Sbjct: 380 DEAKQMFK 387
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 168/323 (52%), Gaps = 14/323 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++ LC +A + L + + + PN+V +N +I K+G + +A+KL EM
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNENSL-DVCSFNIIMDALCKQGLL 116
IQR I PD +T++ LI GFC ++ E + +++++ L ++ ++N +++ CK +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + EM +RG+ + ++YT ++ G+ D A+ +F M+ + D+ +Y+IL
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G C ++D A+ + + + + N Y + +G+C+ G++ +AW+ + +
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK-- 532
Query: 237 RPPDLTPYNIILETLCEQHL-DKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
PD+ YN ++ LC + L +A+ +F + + PN +YN LI ++ +
Sbjct: 533 --PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 293 SIYQNMCLRNIVRDSETFKLLIN 315
+ + M V D+ T L+ N
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTN 613
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++G C A Q + + + + PN+ YNT+I+G CK V +L EM
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 62 IQRGIFPDVVTFSSLIYGF-----CHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
QRG+ + VT++++I GF C + Q +++ N D+ +++I++ LC G L
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + + K ++ ++ Y +++G C KV +A +D+ + PDV +YN +
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTM 541
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G C + EA +L M +PN+ TY L R + + M G
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGF 601
Query: 237 RPPDLTPYNIILETLCEQHLDKA 259
D + +++ L + LDK+
Sbjct: 602 -VGDASTISLVTNMLHDGRLDKS 623
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
KVD A LF M+++ P + +N L+ K+ + + ++L E M T + + TY
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
+ CR +L A L +M G+ PD+ + +L C + + A + + ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYE-PDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 269 ---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+P+ ++ LI G + + EA+++ M R D T+ ++N CKR D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 326 AIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
A+ L ++ F ++D L K EVA
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
IL I +VD+A++L DM+ P+ V + L + + + + +M
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 235 GHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDE 290
G DL Y+I + C + L A + ++ EP++ + + L++GYC + R+ +
Sbjct: 113 GI-SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMD 344
A+++ M D+ TF LI+ + +A+AL DL + +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 345 GLRKNG 350
GL K G
Sbjct: 232 GLCKRG 237
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 200/371 (53%), Gaps = 32/371 (8%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG LM+GLCK G +A + L ++ KP +VI+NT+IHG G ++ A+ + S+M
Sbjct: 325 YGYLMNGLCKI-GRVDAAKDL----FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 62 IQR-GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL----------DVCSFNIIMDAL 110
+ GI PDV T++SLIYG+ WKE + L L +V S+ I++D
Sbjct: 380 VTSYGIVPDVCTYNSLIYGY-----WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
CK G + EA+ V EM G++P+ + + L+ +C + ++ +A ++F M G PDV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
+++N LI G C+++ + A+ L DM+++ +V N VTY L + R G + +A +
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNG 286
M ++G P D YN +++ LC +DKA +F ++ + P+ S NILI+G C++G
Sbjct: 555 MVFQGS-PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFK 340
V+EA+ + M LR D TF LIN C+ + + + +++ + D F
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 341 ILMDGLRKNGM 351
LM L K G
Sbjct: 674 TLMSWLCKGGF 684
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 178/335 (53%), Gaps = 16/335 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G +M C +A+ L+++ V PN VIY T+IH L K VN+A +L EM
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
G PD TF+ +I G C D+ E R+L+ + D ++ +M+ LCK G +
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK-LFDMMIEAGLVPDVWSYNI 175
A + Y + K P+++ + L+ G+ ++D A+ L DM+ G+VPDV +YN
Sbjct: 339 DAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI GY K V A+ + DM K PN +Y L DG C+ G++ +A+N L M G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 236 HRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
+ P+ +N ++ C++H + +A +IF + +P+V ++N LISG C+ + A
Sbjct: 455 LK-PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+ + ++M +V ++ T+ LINAF +R + +A
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 172/328 (52%), Gaps = 10/328 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ TL+ G +A L ++ + P++ YN++I+G K+GLV A ++ +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLD-----VCSFNIIMDALCKQGL 115
M +G P+V +++ L+ GFC + E +LNE S D FN ++ A CK+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ EA + EM ++G +PDV ++ L+ G C ++ A L MI G+V + +YN
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI + + + EA L +M+ + + +TY L GLCR G + A + +M G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 236 HRPPDLTPYNIILETLCEQHL-DKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEA 291
H P +++ NI++ LC + ++A + ++ P++ ++N LI+G C+ GR+++
Sbjct: 595 HAPSNIS-CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCK 319
+++++ + I D+ TF L++ CK
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 162/336 (48%), Gaps = 16/336 (4%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHAD-QWKEVRLLLNE 95
+Y +I L +G +L +M GI F S++ + A + RL+L
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 96 NSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
++ C S+N++++ L A V Y+M+ R + P + ++ ++M +C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
+D A L M + G VP+ Y LI K RV+EA+ L E+M VP+A T+
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE 269
+ GLC+F R+ +A + RM RG P D+T Y ++ LC+ +D A +F IP+
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDIT-YGYLMNGLCKIGRVDAAKDLFYR-IPK 350
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLR-NIVRDSETFKLLINAFCKRKQCDKAIA 328
P + +N LI G+ +GR+D+A ++ +M IV D T+ LI + K A+
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 329 LYKNNR------DLCPFKILMDGLRKNGMEEVAQRV 358
+ + R ++ + IL+DG K G + A V
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 42/304 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G CK A L E+ A L KPN V +N +I CK+ + +A ++ EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGL-KPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSL-DVCSFNIIMDALCKQGLL 116
++G PDV TF+SLI G C D+ K +R +++E + + ++N +++A ++G +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI-------------- 162
EA + EM+ +G D I+Y L+ G C +VDKAR LF+ M+
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 163 -----------EA----------GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
EA G PD+ ++N LI G C+ R+++ + + + + +
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
P+ VT+ L LC+ G + DA L G P T ++I+L+++ Q +
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT-WSILLQSIIPQETLDRRR 724
Query: 262 IFNS 265
+N+
Sbjct: 725 FYNA 728
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 192/335 (57%), Gaps = 14/335 (4%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
G+L++G C+ A+ + ++ V PN+VIYNTVI+GLCK+ +N A ++ M
Sbjct: 153 GSLLNGFCQGNRFQEAVSLVDSMDGFGFV-PNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE---NSLD--VCSFNIIMDALCKQGLLL 117
++GI D VT+++LI G ++ +W + LL + +D V F ++D K+G LL
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + EMI+R V P+V +Y L++G+C+ + A+ +FD+M+ G PDV +YN LI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
G+CK +RV++ M L +M + LV +A TY L G C+ G+L A RM G
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG-V 390
Query: 238 PPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
PD+ YNI+L+ LC ++KA + L + ++ +YNI+I G C+ ++ EA
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKR---KQCDK 325
+++++ + + D+ + +I+ C++ ++ DK
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 181/378 (47%), Gaps = 51/378 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ +L + +IH C+ ++ A L +M++ G P +VT SL+ GFC ++++E
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 91 LLLNE---------------------------NSL-------------DVCSFNIIMDAL 110
L++ N+L D ++N ++ L
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
G +A + +M+KR + P+VI +T L+D + + + +AR L+ MI +VP+V
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
++YN LI G+C + +A + + M++K P+ VTY L G C+ R+ D
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNG 286
M Y+G D YN ++ C+ L+ A K+FN ++ P++ +YNIL+ C NG
Sbjct: 350 MTYQG-LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFK 340
++++A+ + +++ + D T+ ++I C+ + +A L+++ D +
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468
Query: 341 ILMDGLRKNGMEEVAQRV 358
++ GL + G++ A ++
Sbjct: 469 TMISGLCRKGLQREADKL 486
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 161/336 (47%), Gaps = 18/336 (5%)
Query: 52 NKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN--EN---SLDVCSFNII 106
+ A L EM+Q P +V F+ ++ +++ V L + EN S D+ SF I+
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL 166
+ C+ L A A+ +M+K G +P +++ L++G+C + +A L D M G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
VP+V YN +I G CK ++ A+ + M K + +AVTY L GL GR DA
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGY 282
L M R P++ + +++T E +L +A ++ +I PNV +YN LI+G+
Sbjct: 241 LLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DL 336
C +G + +A ++ M + D T+ LI FCK K+ + + L+ D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 337 CPFKILMDGLRKNGMEEVAQRVSQLYGAC--DPDVA 370
+ L+ G + G VAQ+V C PD+
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
K D A LF M+++ +P + + ++ K+ + D + L M + + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
L CR RL A L +M G RP +T +L C+ +A + +S+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVT-LGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 269 ---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
PNV YN +I+G CKN ++ A+ ++ M + I D+ T+ LI+ +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 326 AIALYKN--NRDLCP----FKILMDGLRKNG 350
A L ++ R + P F L+D K G
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 202/383 (52%), Gaps = 25/383 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ GLC++ G A+ L+E+ L+ P++ YNTVI G C+ + KA +L +EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLM-PDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
G +VT+ LI FC A + E L E D+ + ++ C G L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A+ E+++RG P I+Y L+ G+C ++ +A ++F+ MIE G+ P+V++Y L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G C + + EA+ L M+ K+ PNAVTY + + LC+ G + DA + M R
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIF-----NSLIPEPNVQSYNILISGYCKNGRVDE 290
RP ++T YNI+L LC + LD+A+K+ +S +P+V SYN LI G CK R+ +
Sbjct: 384 RPDNIT-YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMD 344
A+ IY + + D T +L+N+ K +KA+ L+K R+ + ++D
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Query: 345 GLRKNGMEEVAQ------RVSQL 361
G K GM VA+ RVS+L
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSEL 525
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 183/380 (48%), Gaps = 56/380 (14%)
Query: 1 MYGTLMSGLCK----SKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQK 56
+Y +L+ G C +G + L+ ++ P + YNT+I G CK G + +A +
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDS-----PCAITYNTLIRGFCKLGQLKEASE 303
Query: 57 LCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALC 111
+ MI+RG+ P+V T++ LI G C + KE LLN + + ++NII++ LC
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV--PD 169
K GL+ +A + M KR +PD I+Y IL+ G C K +D+A KL +M++ PD
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 170 VWSYNILIQGYCKIER-----------------------------------VDEAMNLCE 194
V SYN LI G CK R V++AM L +
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 195 DMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-E 253
+ +V N+ TY + DG C+ G L A L +M P + YN +L +LC E
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFDYNCLLSSLCKE 542
Query: 254 QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
LD+A ++F + + P+V S+NI+I G K G + A S+ M + D T+
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 311 KLLINAFCKRKQCDKAIALY 330
LIN F K D+AI+ +
Sbjct: 603 SKLINRFLKLGYLDEAISFF 622
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 127/253 (50%), Gaps = 11/253 (4%)
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A V M+KRG +V ++ IL+ G C + KA L M L+PDV+SYN +I+
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G+C+ + +++A+ L +M + VT+ L D C+ G++ +A FL M + G
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE- 244
Query: 239 PDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSI 294
DL Y ++ C+ LD+ +F+ ++ P +YN LI G+CK G++ EA I
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK------NNRDLCPFKILMDGLRK 348
++ M R + + T+ LI+ C + +A+ L + + I+++ L K
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 349 NGMEEVAQRVSQL 361
+G+ A + +L
Sbjct: 365 DGLVADAVEIVEL 377
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 156/329 (47%), Gaps = 20/329 (6%)
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQ----WKEVRLLLNEN-SLDVCSFNIIMDALCKQG 114
+M++ F + V+ S L+ + + + + L+L + +V + NI++ LC+
Sbjct: 97 KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+A ++ EM + + PDV SY ++ G+C +++KA +L + M +G + ++
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
ILI +CK ++DEAM ++M L + V Y L G C G L + R
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 235 GHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDE 290
G P +T YN ++ C+ L +A++IF +I PNV +Y LI G C G+ E
Sbjct: 277 GDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA---IALYKNNR---DLCPFKILMD 344
A+ + M ++ ++ T+ ++IN CK A + L K R D + IL+
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 345 GLRKNGMEEVAQRVSQLY----GACDPDV 369
GL G + A ++ L DPDV
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 53/315 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++ LCK +A++ + EL + +P+ + YN ++ GLC G +++A KL M
Sbjct: 355 YNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 62 IQRGIF--PDVVTFSSLIYGFCHADQ---------------------------------- 85
++ + PDV+++++LI+G C ++
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 86 --------WKEV---RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPD 134
WK++ +++ N ++ + ++D CK G+L A + +M +QP
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDT-----YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 135 VISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCE 194
V Y L+ C + +D+A +LF+ M PDV S+NI+I G K + A +L
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 195 DMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ 254
M L P+ TY L + + G L +A +F +M G P +++ + +
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 255 HLDKANKIFNSLIPE 269
DK ++ L+ +
Sbjct: 649 ETDKLTELVKKLVDK 663
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 8/218 (3%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L++ K+ A++ +++ ++V+ N Y +I G CK G++N A+ L +M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVR-NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 65 GIFPDVVTFSSLIYGFCHA---DQ-WKEVRLLLNENSL-DVCSFNIIMDALCKQGLLLEA 119
+ P V ++ L+ C DQ W+ + +N+ DV SFNI++D K G + A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
++ M + G+ PD+ +Y+ L++ + +D+A FD M+++G PD + +++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK- 642
Query: 180 YCKIE-RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
YC + D+ L + ++ K++V + + D +C
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 193/360 (53%), Gaps = 14/360 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G+L+ G C G+A +L L +PN+V+YNT+I GLCK+G +N A +L +EM
Sbjct: 144 FGSLLHGFCLVNRIGDAF-SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
++G+ DVVT+++L+ G C++ +W + +L + + DV +F ++D KQG L
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EMI+ V P+ ++Y +++G C+ ++ A+K FD+M G P+V +YN L
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK VDE M L + M + + TY L G C+ G+L A + M R
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR-R 381
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PD+ + I+L LC ++ A F+ + + +YNI+I G CK +V++A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAW 441
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCK---RKQCDKAIALYKNNRDLCPFKILMDGLRKN 349
++ + + + D+ T+ ++I CK R++ D+ I K +C D L ++
Sbjct: 442 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH 501
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 182/349 (52%), Gaps = 19/349 (5%)
Query: 23 QELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH 82
Q++E L + +L + +IH C+ ++ A + +M++ G P +VTF SL++GFC
Sbjct: 95 QKME-LYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153
Query: 83 ----ADQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
D + V L++ +V +N ++D LCK G L A + EM K+G+ DV++
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 138 YTILMDGYCLKCK-VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
Y L+ G C + D AR L DMM + + PDV ++ LI + K +DEA L ++M
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMM-KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 197 LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QH 255
+ ++ PN VTY + +GLC GRL DA M +G P++ YN ++ C+ +
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF-PNVVTYNTLISGFCKFRM 331
Query: 256 LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
+D+ K+F + E ++ +YN LI GYC+ G++ A+ I+ M R + D T +
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 313 LINAFCKRKQCDKAIALYKNNRD------LCPFKILMDGLRKNGMEEVA 355
L++ C + + A+ + + R+ + + I++ GL K E A
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 161/317 (50%), Gaps = 16/317 (5%)
Query: 54 AQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMD 108
A L EM+ P +V F+ L+ + +++ V ++ L S D+ SF I++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 109 ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
C+ L A +V +M+K G +P ++++ L+ G+CL ++ A L +M+++G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+V YN LI G CK ++ A+ L +M K L + VTY L GLC GR DA L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCK 284
M R PD+ + +++ +Q +LD+A +++ +I +PN +YN +I+G C
Sbjct: 235 RDMMKRSIN-PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCP 338
+GR+ +A + M + + T+ LI+ FCK + D+ + L++ N D+
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 339 FKILMDGLRKNGMEEVA 355
+ L+ G + G VA
Sbjct: 354 YNTLIHGYCQVGKLRVA 370
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 189/344 (54%), Gaps = 21/344 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G+L++G C A+ + ++ L +PN+VIYNT+I LC+ G VN A + M
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGY-EPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ GI PDVVT++SLI H+ W +L++ S DV +F+ ++D K+G L
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
LEA EMI+R V P++++Y L++G C+ +D+A+K+ ++++ G P+ +YN L
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GYCK +RVD+ M + M + + TY L+ G C+ G+ A L RM G
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQ---------SYNILISGYCKNGR 287
PD+ +NI+L+ LC+ KI +L+ ++Q +YNI+I G CK +
Sbjct: 391 H-PDMYTFNILLDGLCDH-----GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
V++A ++ ++ L+ + D T+ ++ +++ +A LY+
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYR 488
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 190/407 (46%), Gaps = 52/407 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ + K I + LE L + +L + T+I C+ ++ A +M
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLG-ISHDLYSFTTLIDCFCRCARLSLALSCLGKM 140
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQG-- 114
++ G P +VTF SL+ GFCH +++ E L+++ +V +N I+D+LC++G
Sbjct: 141 MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQV 200
Query: 115 ------------LLLEAHAVCY---------------------EMIKRGVQPDVISYTIL 141
+ + V Y +M++ G+ PDVI+++ L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+D Y + ++ +A+K ++ MI+ + P++ +YN LI G C +DEA + +++K
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKAN 260
PNAVTY L +G C+ R+ D L M G D YN + + C+ A
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG-VDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 261 KIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
K+ ++ P++ ++NIL+ G C +G++ +A+ +++ V T+ ++I
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL 439
Query: 318 CKRKQCDKA------IALYKNNRDLCPFKILMDGLRKNGMEEVAQRV 358
CK + + A +AL + D+ + +M GLR+ + A +
Sbjct: 440 CKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 149/309 (48%), Gaps = 41/309 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y T++ LC+ A+ L+ ++ + ++P++V YN++I L G + ++ S+
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M++ GI PDV+TFS+LI + Q E + NE + ++ ++N +++ LC GL
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD----------------------- 152
L EA V ++ +G P+ ++Y L++GYC +VD
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 153 ------------KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
A K+ M+ G+ PD++++NIL+ G C ++ +A+ ED+
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKAN 260
V +TY + GLC+ ++ DAW + +G P +T +++ ++ +A+
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484
Query: 261 KIFNSLIPE 269
+++ + E
Sbjct: 485 ELYRKMQKE 493
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 152/348 (43%), Gaps = 49/348 (14%)
Query: 52 NKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNII 106
N A L +M + P +V FS L+ ++++ V L S D+ SF +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL 166
+D C+ L A + +M+K G +P ++++ L++G+C + +A L D ++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL----------- 215
P+V YN +I C+ +V+ A+++ + M + P+ VTY L L
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 216 -----CRFGRLPDAWNFLTRMHYRGHRP------------------PDLTPYNIILETLC 252
R G PD F + G P++ YN ++ LC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 253 EQH-LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
LD+A K+ N L+ + PN +YN LI+GYCK RVD+ M I M + D+
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 309 TFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
T+ L +C+ + A + + D+ F IL+DGL +G
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG 408
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 187/343 (54%), Gaps = 11/343 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +L++G C +AI ++ + KPN+V Y T+I LCK+ +N A +L ++M
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGF-KPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
G P+VVT+++L+ G C +W + LL + +V +F ++DA K G L
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + MI+ V PDV +Y L++G C+ +D+AR++F +M G P+ Y L
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK +RV++ M + +M K +V N +TY L G C GR A +M R
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR-R 393
Query: 237 RPPDLTPYNIILETL-CEQHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
PPD+ YN++L+ L C ++KA IF + N+ +Y I+I G CK G+V++A
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++ ++ + + + T+ +I+ FC+R +A +L+K ++
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 185/384 (48%), Gaps = 48/384 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I ++++ L + P L N V+H +C +A +M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILG-IPPLLCTCNIVMHCVCLSSQPCRASCFLGKM 144
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
++ G PD+VTF+SL+ G+CH +N I DA+ A
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCH--------------------WNRIEDAI----------A 174
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
+ +++ G +P+V++YT L+ C ++ A +LF+ M G P+V +YN L+ G C
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA---WNFLTRMHYRGHRP 238
+I R +A L DM+ + + PN +T+ L D + G+L +A +N + +M
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY---- 290
Query: 239 PDLTPYNIILETLCEQHL-DKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSI 294
PD+ Y ++ LC L D+A ++F + PN Y LI G+CK+ RV++ M I
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY------KNNRDLCPFKILMDGLRK 348
+ M + +V ++ T+ +LI +C + D A ++ + D+ + +L+DGL
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 349 NGMEEVAQRVSQLYGACDPDVALV 372
NG E A + + + D+ +V
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIV 434
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 137/277 (49%), Gaps = 41/277 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++GLC+ G+A L+++ + ++PN++ + +I K G + +A++L + M
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRR-IEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 62 IQRGIFPDVVTFSSLIYGFCH---ADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLL 116
IQ ++PDV T+ SLI G C D+ +++ L+ N + + ++ CK +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + YEM ++GV + I+YT+L+ GYCL + D A+++F+ M PD+ +YN+L
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 177 -----------------------------------IQGYCKIERVDEAMNLCEDMLTKNL 201
IQG CK+ +V++A +L + +K +
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
PN +TY + G CR G + +A + +M G P
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG+L++GLC A Q +E PN VIY T+IHG CK V K+ EM
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMER-NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
Q+G+ + +T++ LI G+C + + + N+ S D+ ++N+++D LC G +
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + M KR + ++++YTI++ G C KV+ A LF + G+ P+V +Y +
Sbjct: 415 EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTM 474
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
I G+C+ + EA +L + M +PN YK
Sbjct: 475 ISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ G CKSK + ++ E+ +V N + Y +I G C G + AQ++ ++
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV-ANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGL 115
M R PD+ T++ L+ G C + ++ ++ E +++ ++ II+ +CK G
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
+ +A + + +G++P+VI+YT ++ G+C + + +A LF M E G +P+ Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 178/295 (60%), Gaps = 11/295 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK + A+ L ++EA + ++ N+VIY+TVI LCK + A L +EM
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+G+ P+V+T+SSLI C+ +W + LL++ + ++ +F+ ++DA K+G L
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
++A + EMIKR + P++ +Y+ L++G+C+ ++ +A+++ ++MI +P+V +YN L
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK +RVD+ M L +M + LV N VTY L G + +A +M G
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSL---IPEPNVQSYNILISGYCKNGR 287
P LT YNI+L+ LC+ L KA +F L EP++ +YNI+I G CK G+
Sbjct: 460 HPNILT-YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 193/399 (48%), Gaps = 52/399 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I +++E L + NL YN +I+ C+ ++ A L +M
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILG-ISHNLYTYNILINCFCRCSRLSLALALLGKM 139
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G PD+VT +SL+ GFCH ++ + L+++ D +F ++ L
Sbjct: 140 MKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKA 199
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M++RG QPD+++Y +++G C + D A L + M A + +V Y+ +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK D+A+NL +M K + PN +TY L LC +GR DA L+ M R
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-K 318
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE-------------------------- 269
P+L ++ +++ ++ L KA K++ +I
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 270 ------------PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
PNV +YN LI+G+CK RVD+ M +++ M R +V ++ T+ LI+ F
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 318 CKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
+ + CD A ++K + ++ + IL+DGL KNG
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
++D A LF +M ++ P + ++ L+ K+ + D ++ E M + N TY
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
L + CR RL A L +M G+ PD+ N +L C + A + + ++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYE-PDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 269 ---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+P+ ++ LI G + + EA+++ M R D T+ ++N CKR D
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 326 AIAL 329
A+ L
Sbjct: 237 ALNL 240
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ G +++ NA +++ ++ V PN++ YN ++ GLCK+G + KA + E
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVG-VHPNILTYNILLDGLCKNGKLAKAM-VVFEY 488
Query: 62 IQRGIF-PDVVTFSSLIYGFCHADQWK 87
+QR PD+ T++ +I G C A +WK
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 198/388 (51%), Gaps = 21/388 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+YG+++ LC+ A + E+ Q + P+ V+Y T+I G CK G + A K E
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M R I PDV+T++++I GFC E L +E D +F +++ CK G
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ +A V MI+ G P+V++YT L+DG C + +D A +L M + GL P++++YN
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ G CK ++EA+ L + L + VTY L D C+ G + A L M +G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 236 HRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
+P +T +N+++ C L+ K+ N ++ + PN ++N L+ YC + A
Sbjct: 557 LQPTIVT-FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDG 345
+IY++MC R + D +T++ L+ CK + +A L++ + + + +L+ G
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 346 L--RKNGME--EVAQRVSQLYGACDPDV 369
RK +E EV ++ + A D ++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 187/353 (52%), Gaps = 14/353 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T+++G C+ G + + L E+ + +KPN IY ++I LC+ + +A++ SEM
Sbjct: 284 YSTVVNGYCRF-GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
I++GI PD V +++LI GFC + E + DV ++ I+ C+ G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + +EM +G++PD +++T L++GYC + A ++ + MI+AG P+V +Y L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK +D A L +M L PN TY + +GLC+ G + +A + G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
D Y +++ C+ +DKA +I ++ +P + ++N+L++G+C +G +++
Sbjct: 523 N-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDG 345
+ M + I ++ TF L+ +C R A A+YK D+C + DG
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK---DMCSRGVGPDG 631
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 185/343 (53%), Gaps = 22/343 (6%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ----WKEV 89
N+ YN VIH +C+ G + +A L M +G PDV+++S+++ G+C + WK +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 90 RLL----LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
++ L NS + I+ LC+ L EA EMI++G+ PD + YT L+DG+
Sbjct: 305 EVMKRKGLKPNSY---IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + + A K F M + PDV +Y +I G+C+I + EA L +M K L P++
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFN 264
VT+ L +G C+ G + DA+ M G P++ Y +++ LC E LD AN++ +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+ +PN+ +YN +++G CK+G ++EA+ + + D+ T+ L++A+CK
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 322 QCDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRV 358
+ DKA + K + L P F +LM+G +GM E +++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 171/371 (46%), Gaps = 46/371 (12%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ G CK A + E+ + + P+++ Y +I G C+ G + +A KL E
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M +G+ PD VTF+ LI G+C A K+ + N S +V ++ ++D LCK+G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A+ + +EM K G+QP++ +Y +++G C +++A KL AGL D +Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ YCK +D+A + ++ML K L P VT+ L +G C G L D L M +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 236 HRPPDLTPYN----------------IILETLCEQHLDKANKIFNSLIP----------- 268
P+ T +N I + +C + + K + +L+
Sbjct: 592 I-APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 269 ------------EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+V +Y++LI G+ K + EA ++ M + D E F +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
Query: 317 FCKRKQCDKAI 327
K K+ D +
Sbjct: 711 KYKGKRPDTIV 721
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 141/284 (49%), Gaps = 26/284 (9%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ GLCK +A + L E+ + L +PN+ YN++++GLCK G + +A KL E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
G+ D VT+++L+ +C + + + + +L E + +FN++M+ C G+L
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + M+ +G+ P+ ++ L+ YC++ + A ++ M G+ PD +Y L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA------------ 224
++G+CK + EA L ++M K + TY L G + + +A
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 225 ------WNFLTRMHYRGHRPPDLT-PYNIILET-LCEQHLDKAN 260
++F + Y+G RP + P + I+E L ++ L AN
Sbjct: 698 AADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGAN 741
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 14/265 (5%)
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCY-EMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
S+D C N+ + L K + + E + GV +V SY I++ C ++ +A
Sbjct: 209 SVDSC--NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 266
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
L +M G PDV SY+ ++ GYC+ +D+ L E M K L PN+ Y + L
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIF---NSLIPEPN 271
CR +L +A + M +G PD Y +++ C++ + A+K F +S P+
Sbjct: 327 CRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
V +Y +ISG+C+ G + EA ++ M + + DS TF LIN +CK A ++
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 332 N------NRDLCPFKILMDGLRKNG 350
+ + ++ + L+DGL K G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEG 470
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 55/290 (18%)
Query: 130 GVQPDV--ISYTILMDGYCLKCKVDKARKLFDMMIEAGLV-------------------- 167
G P V + + +L+D L+ +AR++F+ M+ GLV
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLR----EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 168 ----------PDV---W---SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
P+V W SYNI+I C++ R+ EA +L M K P+ ++Y +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE- 269
+G CRFG L W + M +G +P Y I+ LC L +A + F+ +I +
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 270 --PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
P+ Y LI G+CK G + A + M R+I D T+ +I+ FC+ +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 328 ALYKN------NRDLCPFKILMDGLRKNGMEEVAQRVSQ--LYGACDPDV 369
L+ D F L++G K G + A RV + C P+V
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 198/388 (51%), Gaps = 21/388 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+YG+++ LC+ A + E+ Q + P+ V+Y T+I G CK G + A K E
Sbjct: 318 IYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M R I PDV+T++++I GFC E L +E D +F +++ CK G
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ +A V MI+ G P+V++YT L+DG C + +D A +L M + GL P++++YN
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ G CK ++EA+ L + L + VTY L D C+ G + A L M +G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 236 HRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
+P +T +N+++ C L+ K+ N ++ + PN ++N L+ YC + A
Sbjct: 557 LQPTIVT-FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDG 345
+IY++MC R + D +T++ L+ CK + +A L++ + + + +L+ G
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 346 L--RKNGME--EVAQRVSQLYGACDPDV 369
RK +E EV ++ + A D ++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEI 703
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 187/353 (52%), Gaps = 14/353 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T+++G C+ G + + L E+ + +KPN IY ++I LC+ + +A++ SEM
Sbjct: 284 YSTVVNGYCRF-GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
I++GI PD V +++LI GFC + E + DV ++ I+ C+ G +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + +EM +G++PD +++T L++GYC + A ++ + MI+AG P+V +Y L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK +D A L +M L PN TY + +GLC+ G + +A + G
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
D Y +++ C+ +DKA +I ++ +P + ++N+L++G+C +G +++
Sbjct: 523 N-ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDG 345
+ M + I ++ TF L+ +C R A A+YK D+C + DG
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK---DMCSRGVGPDG 631
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 185/343 (53%), Gaps = 22/343 (6%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ----WKEV 89
N+ YN VIH +C+ G + +A L M +G PDV+++S+++ G+C + WK +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 90 RLL----LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
++ L NS + I+ LC+ L EA EMI++G+ PD + YT L+DG+
Sbjct: 305 EVMKRKGLKPNSY---IYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + + A K F M + PDV +Y +I G+C+I + EA L +M K L P++
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFN 264
VT+ L +G C+ G + DA+ M G P++ Y +++ LC E LD AN++ +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+ +PN+ +YN +++G CK+G ++EA+ + + D+ T+ L++A+CK
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 322 QCDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRV 358
+ DKA + K + L P F +LM+G +GM E +++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 171/371 (46%), Gaps = 46/371 (12%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ G CK A + E+ + + P+++ Y +I G C+ G + +A KL E
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M +G+ PD VTF+ LI G+C A K+ + N S +V ++ ++D LCK+G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A+ + +EM K G+QP++ +Y +++G C +++A KL AGL D +Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ YCK +D+A + ++ML K L P VT+ L +G C G L D L M +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 236 HRPPDLTPYN----------------IILETLCEQHLDKANKIFNSLIP----------- 268
P+ T +N I + +C + + K + +L+
Sbjct: 592 I-APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 269 ------------EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+V +Y++LI G+ K + EA ++ M + D E F +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
Query: 317 FCKRKQCDKAI 327
K K+ D +
Sbjct: 711 KYKGKRPDTIV 721
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 141/284 (49%), Gaps = 26/284 (9%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ GLCK +A + L E+ + L +PN+ YN++++GLCK G + +A KL E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
G+ D VT+++L+ +C + + + + +L E + +FN++M+ C G+L
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + M+ +G+ P+ ++ L+ YC++ + A ++ M G+ PD +Y L
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA------------ 224
++G+CK + EA L ++M K + TY L G + + +A
Sbjct: 638 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 225 ------WNFLTRMHYRGHRPPDLT-PYNIILET-LCEQHLDKAN 260
++F + Y+G RP + P + I+E L ++ L AN
Sbjct: 698 AADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGAN 741
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 14/265 (5%)
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCY-EMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
S+D C N+ + L K + + E + GV +V SY I++ C ++ +A
Sbjct: 209 SVDSC--NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAH 266
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
L +M G PDV SY+ ++ GYC+ +D+ L E M K L PN+ Y + L
Sbjct: 267 HLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLL 326
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIF---NSLIPEPN 271
CR +L +A + M +G PD Y +++ C++ + A+K F +S P+
Sbjct: 327 CRICKLAEAEEAFSEMIRQGIL-PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
V +Y +ISG+C+ G + EA ++ M + + DS TF LIN +CK A ++
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 332 N------NRDLCPFKILMDGLRKNG 350
+ + ++ + L+DGL K G
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEG 470
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 125/290 (43%), Gaps = 55/290 (18%)
Query: 130 GVQPDV--ISYTILMDGYCLKCKVDKARKLFDMMIEAGLV-------------------- 167
G P V + + +L+D L+ +AR++F+ M+ GLV
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLR----EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 168 ----------PDV---W---SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
P+V W SYNI+I C++ R+ EA +L M K P+ ++Y +
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE- 269
+G CRFG L W + M +G +P Y I+ LC L +A + F+ +I +
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 270 --PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
P+ Y LI G+CK G + A + M R+I D T+ +I+ FC+ +A
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 328 ALYKN------NRDLCPFKILMDGLRKNGMEEVAQRVSQ--LYGACDPDV 369
L+ D F L++G K G + A RV + C P+V
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 160/271 (59%), Gaps = 8/271 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++GLCK + +A+ L ++E +K ++VIYN +I LCKDG AQ L +EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETH-IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GIFPDV+T+S +I FC + +W + LL + + DV +F+ +++AL K+G +
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + +M++RG+ P I+Y ++DG+C + +++ A+++ D M PDV +++ L
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GYCK +RVD M + +M + +V N VTY L G C+ G L A + L M G
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSL 266
P +T + +L +LC ++ L KA I L
Sbjct: 283 APNYIT-FQSMLASLCSKKELRKAFAILEDL 312
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 159/310 (51%), Gaps = 14/310 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH-ADQWKEVR 90
+P++V + T+++GLC +G V +A L M++ G P + ++I G C D +
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 91 LL--LNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
LL + E + V +N I+D LCK G + A + EM +G+ PDVI+Y+ ++D +C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ A +L MIE + PDV +++ LI K +V EA + DML + + P +
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNS 265
TY + DG C+ RL DA L M + PD+ ++ ++ C+ + +D +IF
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSC-SPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+ N +Y LI G+C+ G +D A + M + + TF+ ++ + C +K+
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 323 CDKAIALYKN 332
KA A+ ++
Sbjct: 302 LRKAFAILED 311
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 144/271 (53%), Gaps = 6/271 (2%)
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCS-FNIIMDALCKQGLLLEA 119
M++ G PDVVTF++L+ G C + + L++ + + I++ LCK G A
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ +M + ++ V+ Y ++D C A+ LF M + G+ PDV +Y+ +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
+C+ R +A L DM+ + + P+ VT+ L + L + G++ +A M RG P
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 240 DLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
+T YN +++ C+Q L+ A ++ +S+ + P+V +++ LI+GYCK RVD M I+
Sbjct: 181 TIT-YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
M R IV ++ T+ LI+ FC+ D A
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 173/330 (52%), Gaps = 13/330 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P+++ T+I G C+ G KA K+ + G PDV+T++ +I G+C A + +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 93 LNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
L+ S+ DV ++N I+ +LC G L +A V M++R PDVI+YTIL++ C
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
V A KL D M + G PDV +YN+L+ G CK R+DEA+ DM + PN +T+
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP- 268
+ +C GR DA L M +G P +T +NI++ LC + L +A I +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT-FNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 269 --EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+PN SYN L+ G+CK ++D A+ + M R D T+ ++ A CK + + A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 327 IALYK--NNRDLCP----FKILMDGLRKNG 350
+ + +++ P + ++DGL K G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 196/404 (48%), Gaps = 55/404 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGL---------------- 45
Y ++SG CK+ NA+ L + V P++V YNT++ L
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 46 -------------------CKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW 86
C+D V A KL EM RG PDVVT++ L+ G C +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 87 KEVRLLLNENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
E LN+ C + NII+ ++C G ++A + +M+++G P V+++ IL
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
++ C K + +A + + M + G P+ SYN L+ G+CK +++D A+ E M+++
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKAN 260
P+ VTY + LC+ G++ DA L ++ +G P +T YN +++ L + KA
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT-YNTVIDGLAKAGKTGKAI 469
Query: 261 KIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
K+ + + +P+ +Y+ L+ G + G+VDEA+ + I ++ TF ++
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 318 CKRKQCDKAIA--LYKNNRDLCP----FKILMDGLRKNGMEEVA 355
CK +Q D+AI ++ NR P + IL++GL GM + A
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 20/277 (7%)
Query: 50 LVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDA 109
LV+ A K+ S G+ F +L G+ +++ + + +L+ N +
Sbjct: 56 LVSAASKVESS----GLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQ 111
Query: 110 LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
+ + G L E M+ G PD+I T L+ G+C K KA K+ +++ +G VPD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT 229
V +YN++I GYCK ++ A+++ + M ++ P+ VTY + LC G+L A L
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 230 RMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKN 285
RM R PD+ Y I++E C + + A K+ + + P+V +YN+L++G CK
Sbjct: 229 RMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 286 GRVDEAMSIYQNM----CLRNIVRDSETFKLLINAFC 318
GR+DEA+ +M C N++ T +++ + C
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVI----THNIILRSMC 320
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 192/367 (52%), Gaps = 22/367 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQEL--EALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
Y L+ GLCK+ A L ++ E L+ P+ YNT+I G CK G+V A+++
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLE---PDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQG 114
+ + G PD T+ SLI G CH + L NE +V +N ++ L QG
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
++LEA + EM ++G+ P+V ++ IL++G C V A L +MI G PD++++N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
ILI GY +++ A+ + + ML + P+ TY L +GLC+ + D M +
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 235 GHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
G P+L +NI+LE+LC + LD+A + + + P+ ++ LI G+CKNG +D
Sbjct: 526 GC-APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 291 AMSIYQNMC-LRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLC------PFKILM 343
A ++++ M + + T+ ++I+AF ++ A L++ D C +++++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 344 DGLRKNG 350
DG K G
Sbjct: 645 DGFCKTG 651
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 193/364 (53%), Gaps = 17/364 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ LCK KG + L + + V PNL YN I GLC+ G ++ A ++ +
Sbjct: 219 FNKLLRVLCK-KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRL----LLNEN-SLDVCSFNIIMDALCKQGLL 116
I++G PDV+T+++LIYG C +++E + ++NE D ++N ++ CK G++
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + + + G PD +Y L+DG C + + ++A LF+ + G+ P+V YN L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G + EA L +M K L+P T+ L +GLC+ G + DA + M +G+
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PD+ +NI++ Q ++ A +I + ++ +P+V +YN L++G CK + ++ M
Sbjct: 458 F-PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGL 346
Y+ M + + TF +L+ + C+ ++ D+A+ L + N D F L+DG
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 347 RKNG 350
KNG
Sbjct: 577 CKNG 580
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 180/338 (53%), Gaps = 12/338 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ GLC + A+ E + +KPN+++YNT+I GL G++ +A +L +EM
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALG-KGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 62 IQRGIFPDVVTFSSLIYGFCH----ADQWKEVRLLLNENSL-DVCSFNIIMDALCKQGLL 116
++G+ P+V TF+ L+ G C +D V++++++ D+ +FNI++ Q +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + M+ GV PDV +Y L++G C K + + + M+E G P+++++NIL
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
++ C+ ++DEA+ L E+M K++ P+AVT+ L DG C+ G L A+ +M +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME-EAY 596
Query: 237 RPPDLTP-YNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
+ TP YNII+ E+ ++ A K+F ++ P+ +Y +++ G+CK G V+
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
M + T +IN C + +A +
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 168/390 (43%), Gaps = 53/390 (13%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P + YN ++ L G ++A K+ M RGI PDV +F+ + FC +
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 92 LLNENSLDVC----------------------------------------SFNIIMDALC 111
LLN S C +FN ++ LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
K+G + E + ++IKRGV P++ +Y + + G C + ++D A ++ +IE G PDV
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
+YN LI G CK + EA M+ + L P++ TY L G C+ G + A +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 232 HYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
+ G P T Y +++ LC E ++A +FN + +PNV YN LI G G
Sbjct: 348 VFNGFVPDQFT-YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK------NNRDLCPFKI 341
+ EA + M + ++ + +TF +L+N CK A L K D+ F I
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 342 LMDGLRKNGMEEVAQRV--SQLYGACDPDV 369
L+ G E A + L DPDV
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 148/316 (46%), Gaps = 49/316 (15%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ GL A Q E+ L+ P + +N +++GLCK G V+ A L
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 61 MIQRGIFPDVVTFSSLIYGF-----------------------------------CHADQ 85
MI +G FPD+ TF+ LI+G+ C +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 86 WKEV----RLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
+++V + ++ + + ++ +FNI++++LC+ L EA + EM + V PD +++
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPD-VWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
L+DG+C +D A LF M EA V +YNI+I + + V A L ++M+ +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDK 258
L P+ TY+ + DG C+ G + + FL M G P LT ++ LC E + +
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF-IPSLTTLGRVINCLCVEDRVYE 690
Query: 259 ANKIFN-----SLIPE 269
A I + L+PE
Sbjct: 691 AAGIIHRMVQKGLVPE 706
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++GLCK+ + ++T + + + PNL +N ++ LC+ +++A L EM
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTM-VEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN--ENSLDVCS----FNIIMDALCKQGL 115
+ + PD VTF +LI GFC L E + V S +NII+ A ++
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ A + EM+ R + PD +Y +++DG+C V+ K M+E G +P + +
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+I C +RV EA + M+ K LVP AV
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 96/256 (37%), Gaps = 75/256 (29%)
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN----------------------- 174
Y M Y K KV +A +F+ M P V+SYN
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 175 ------------ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY-------------- 208
I ++ +CK R A+ L +M ++ N V Y
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 209 -------KYLFDG--------------LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
K L G LC+ G + + L ++ RG P +L YN+
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP-NLFTYNLF 257
Query: 248 LETLCEQ-HLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
++ LC++ LD A ++ LI P+P+V +YN LI G CKN + EA M +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 304 VRDSETFKLLINAFCK 319
DS T+ LI +CK
Sbjct: 318 EPDSYTYNTLIAGYCK 333
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 194/370 (52%), Gaps = 18/370 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S + K I ++++ L + NL Y+ I+ C+ ++ A + +M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLG-ISHNLYTYSIFINYFCRRSQLSLALAILGKM 136
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
++ G P +VT +SL+ GFCH ++ E L+++ D +F ++ L +
Sbjct: 137 MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A+ M+ +G QPD+++Y +++G C + + D A L + M + + DV YN +
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK + +D+A +L M TK + P+ TY L LC +GR DA L+ M + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-N 315
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDEA 291
PDL +N +++ E L +A K+++ ++ P+V +YN LI G+CK RV+E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDG 345
M +++ M R +V ++ T+ LI+ F + + CD A ++K + D+ + IL+DG
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 346 LRKNGMEEVA 355
L NG E A
Sbjct: 436 LCNNGNVETA 445
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 186/348 (53%), Gaps = 13/348 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++GLCK A+ L ++E + ++ ++VIYNT+I GLCK ++ A L ++M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+GI PDV T++ LI C+ +W + LL++ + D+ FN ++DA K+G L
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 117 LEAHAVCYEMIK-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+EA + EM+K + PDV++Y L+ G+C +V++ ++F M + GLV + +Y
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G+ + D A + + M++ + P+ +TY L DGLC G + A M R
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEA 291
+ D+ Y ++E LC+ ++ +F SL +PNV +Y ++SG+C+ G +EA
Sbjct: 457 MKL-DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
+++ M + +S T+ LI A + + L K R C F
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS-CGF 562
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 168/325 (51%), Gaps = 12/325 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y T++ GLCK K +A ++E + +KP++ YN +I LC G + A +L S+
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMET-KGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL------DVCSFNIIMDALCKQG 114
M+++ I PD+V F++LI F + E L +E DV ++N ++ CK
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ E V EM +RG+ + ++YT L+ G+ D A+ +F M+ G+ PD+ +YN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
IL+ G C V+ A+ + E M +++ + VTY + + LC+ G++ D W+ + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 235 GHRPPDLTPYNIILETLCEQHL-DKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDE 290
G + P++ Y ++ C + L ++A+ +F + P PN +YN LI ++G
Sbjct: 491 GVK-PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 291 AMSIYQNMCLRNIVRDSETFKLLIN 315
+ + + M D+ TF L+ N
Sbjct: 550 SAELIKEMRSCGFAGDASTFGLVTN 574
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 178/373 (47%), Gaps = 50/373 (13%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV--- 89
P++V N++++G C +++A L +M++ G PD VTF++L++G ++ E
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 90 --RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
R+++ D+ ++ +++ LCK+G A + +M K ++ DV+ Y ++DG C
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+D A LF+ M G+ PDV++YN LI C R +A L DML KN+ P+ V
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-------------- 253
+ L D + G+L +A M H PD+ YN +++ C+
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 254 ----------------------QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRV 288
+ D A +F ++ + P++ +YNIL+ G C NG V
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK------AIALYKNNRDLCPFKIL 342
+ A+ +++ M R++ D T+ +I A CK + + +++L ++ + +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 343 MDGLRKNGMEEVA 355
M G + G++E A
Sbjct: 503 MSGFCRKGLKEEA 515
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 186/348 (53%), Gaps = 12/348 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL+ GL + + A+ ++ + ++ +P+LV Y VI+GLCK G + A L ++M
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+ I DVV ++++I G C + L N+ DV ++N ++ LC G
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG-LVPDVWSYNI 175
+A + +M+++ + PD++ + L+D + + K+ +A KL+D M+++ PDV +YN
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI+G+CK +RV+E M + +M + LV N VTY L G + +A +M G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEA 291
P D+ YNI+L+ LC +++ A +F + ++ +Y +I CK G+V++
Sbjct: 422 VHP-DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
++ ++ L+ + + T+ +++ FC++ ++A AL+ ++ P
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 209/388 (53%), Gaps = 19/388 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G L+ G C++ + L EL PN+VIY T+I G CK G + KA+ L EM
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGF-SPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 62 IQRGIFPDVVTFSSLIYGFCH---ADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLL 116
+ G+ + T++ LI G Q E+ + E+ + ++ ++N +M+ LCK G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A V EM +RGV ++++Y L+ G C + K+++A K+ D M G+ P++ +YN L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+C + ++ +A++LC D+ ++ L P+ VTY L G CR G A + M RG
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKI---FNSLIPEPNVQSYNILISGYCKNGRVDEAM 292
+P +T Y I+++T +++KA ++ L P+V +Y++LI G+C G+++EA
Sbjct: 405 KPSKVT-YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGL 346
++++M +N + + +I +CK +A+ L K ++L P ++ +++ L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 347 RKNGMEEVAQRVSQ--LYGACDPDVALV 372
K + A+R+ + + DP +++
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSIL 551
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 17/364 (4%)
Query: 22 LQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC 81
L L + K +Y +I+ + +N + +EM+ G P F+ L+
Sbjct: 81 LHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVV 140
Query: 82 HADQWKEVRLLLNENS----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
+ + + NEN LDV SF I++ C+ G + ++ + E+ + G P+V+
Sbjct: 141 GSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVI 200
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
YT L+DG C K +++KA+ LF M + GLV + +Y +LI G K + + E M
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHL 256
+ PN TY + + LC+ GR DA+ M RG ++ YN ++ LC E L
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG-VSCNIVTYNTLIGGLCREMKL 319
Query: 257 DKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLL 313
++ANK+ + + + PN+ +YN LI G+C G++ +A+S+ +++ R + T+ +L
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 314 INAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGL-RKNGMEEVAQ-RVSQLYGAC 365
++ FC++ A + K R + P + IL+D R + ME+ Q R+S
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 366 DPDV 369
PDV
Sbjct: 440 VPDV 443
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 181/344 (52%), Gaps = 19/344 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL+SGL ++ +A++ E+ VKPN V YN +I G C++G ++KA + EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNII-----MDALCKQGLL 116
++GI PD ++ LI+G C Q E ++ ++ C N I + C++G L
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF----DMMIEAGLVPDVWS 172
EA +VC EM++RGV D++ Y +L+DG LK K RKLF M + GL PD
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDG-SLK---HKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
Y +I K EA + + M+ + VPN VTY + +GLC+ G + +A ++M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 233 YRGHRPPDLTPYNIILETLCEQHLD--KANKIFNSLIPE--PNVQSYNILISGYCKNGRV 288
P +T Y L+ L + +D KA ++ N+++ N +YN+LI G+C+ GR+
Sbjct: 745 PVSSVPNQVT-YGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRI 803
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+EA + M + D T+ +IN C+R KAI L+ +
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 171/348 (49%), Gaps = 24/348 (6%)
Query: 26 EALQLVK--------PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI 77
EAL LVK PNL +YN +I LCK ++A+ L M + G+ P+ VT+S LI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 78 YGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
FC + L E L V +N +++ CK G + A EMI + ++
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
P V++YT LM GYC K K++KA +L+ M G+ P ++++ L+ G + + +A+ L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
+M N+ PN VTY + +G C G + A+ FL M +G PD Y ++ LC
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG-IVPDTYSYRPLIHGLC 588
Query: 253 EQHLDKANKIFNSLIPEPNVQ----SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
K+F + + N + Y L+ G+C+ G+++EA+S+ Q M R + D
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 309 TFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKNG 350
+ +LI+ K K L K ++R L P + ++D K G
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 94/428 (21%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
L+ GL K + G A++ ++ ++ ++P++ IY VI LC+ +++A+++ + M
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVG-IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 64 RG-----------------------------------IFPDVVTFSSLIYGFCHADQWKE 88
G + PDVVT+ +L+YG C +++
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 89 VRLLLNE-------------NSL------------------DVCSFNI---------IMD 108
+++E +SL V F + ++D
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 109 ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
+LCK EA + M K G++P+ ++Y+IL+D +C + K+D A M++ GL
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
V+ YN LI G+CK + A +M+ K L P VTY L G C G++ A
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIP---EPNVQSYNILISGYCK 284
M +G P + + +L L L + A K+FN + +PN +YN++I GYC+
Sbjct: 496 HEMTGKG-IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMD 344
G + +A + M + IV D+ +++ LI+ C Q +A K+ +D
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-------------KVFVD 601
Query: 345 GLRKNGME 352
GL K E
Sbjct: 602 GLHKGNCE 609
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 162/334 (48%), Gaps = 16/334 (4%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P + + ++HGL K A +L ++M+ GI PDV ++ +I C + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 93 LNENS-----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ +++ +N+++D LCK+ + EA + ++ + ++PDV++Y L+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ + ++ D M+ P + + L++G K +++EA+NL + ++ + PN
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSL 266
Y L D LC+ + +A RM G RP D+T Y+I+++ C + LD A +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEM 428
Query: 267 IPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ +V YN LI+G+CK G + A M + + T+ L+ +C + +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 324 DKAIALYK--NNRDLCP----FKILMDGLRKNGM 351
+KA+ LY + + P F L+ GL + G+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL--IYGFCHADQWKEVR 90
PN V Y VI+GLCK G VN+A+ LCS+M P+ VT+ I D K V
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 91 L---LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
L +L + ++N+++ C+QG + EA + MI GV PD I+YT +++ C
Sbjct: 775 LHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ V KA +L++ M E G+ PD +YN LI G C + +A L +ML + L+PN T
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Query: 208 YK 209
+
Sbjct: 895 SR 896
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 141/290 (48%), Gaps = 15/290 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G C+ A+ QE+ + V +LV Y +I G K L EM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEM-VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV----RLLLNENSL-DVCSFNIIMDALCKQGLL 116
RG+ PD V ++S+I +KE L++NE + + ++ +++ LCK G +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD--KARKLFDMMIEAGLVPDVWSYN 174
EA +C +M P+ ++Y +D K +VD KA +L + +++ GL+ + +YN
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVELHNAILK-GLLANTATYN 791
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+LI+G+C+ R++EA L M+ + P+ +TY + + LCR + A M +
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 235 GHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILIS 280
G R PD YN ++ C + KA ++ N ++ + PN ++ S
Sbjct: 852 GIR-PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 29/262 (11%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD------- 152
SF I++ AL K L A ++ ++ R ++P + + +L Y KCK+
Sbjct: 104 TASFCILIHALVKANLFWPASSLLQTLLLRALKPSDV-FNVLFSCY-EKCKLSSSSSFDL 161
Query: 153 ------KARKLFD-------MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
++R++ D M+ + L+P+V + + L+ G K AM L DM++
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDK 258
+ P+ Y + LC L A + M G ++ PYN++++ LC +Q + +
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC-DVNIVPYNVLIDGLCKKQKVWE 280
Query: 259 ANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNM-CLRNIVRDSETFKLLI 314
A I L +P+V +Y L+ G CK + + + M CLR L+
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLV 339
Query: 315 NAFCKRKQCDKAIALYKNNRDL 336
KR + ++A+ L K D
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDF 361
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 79/375 (21%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN+ YN +++G CK G V +A + S++++ G+ PD T++SLI G+C +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 93 LNENSLDVC----------------------------------------SFNIIMDALCK 112
NE L C ++ +++ +LC
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 113 QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWS 172
EA + EM + G++P++ +YT+L+D C +CK +KAR+L M+E GL+P+V +
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 173 YNILIQGYCKIERVDEAMNLCE----------------------------------DMLT 198
YN LI GYCK +++A+++ E ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLD 257
+ ++P+ VTY L DG CR G A+ L+ M+ RG P T Y ++++LC+ + ++
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT-YTSMIDSLCKSKRVE 514
Query: 258 KANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
+A +F+SL + PNV Y LI GYCK G+VDEA + + M +N + +S TF LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 315 NAFCKRKQCDKAIAL 329
+ C + +A L
Sbjct: 575 HGLCADGKLKEATLL 589
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 45/377 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ LC S+ A+ ++E+E +KPN+ Y +I LC KA++L +M
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETG-IKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 62 IQRGIFPDVVTFSSLIYGFCH----ADQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGLL 116
+++G+ P+V+T+++LI G+C D V L+ + S + ++N ++ CK +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN-- 174
+A V +M++R V PDV++Y L+DG C D A +L +M + GLVPD W+Y
Sbjct: 445 -KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 175 ---------------------------------ILIQGYCKIERVDEAMNLCEDMLTKNL 201
LI GYCK +VDEA + E ML+KN
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
+PN++T+ L GLC G+L +A +M G +P T +I L + D A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 262 IFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
F ++ +P+ +Y I YC+ GR+ +A + M + D T+ LI +
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 319 KRKQCDKAIALYKNNRD 335
Q + A + K RD
Sbjct: 684 DLGQTNFAFDVLKRMRD 700
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 46/348 (13%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
YNT+++ L + GLV++ +++ EM++ + P++ T++ ++ G+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY----------------- 228
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
CK G + EA+ ++++ G+ PD +YT L+ GYC + +D A K+
Sbjct: 229 -------------CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
F+ M G + +Y LI G C R+DEAM+L M P TY L LC
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQ 273
R +A N + M G + P++ Y +++++LC Q +KA ++ ++ + PNV
Sbjct: 336 SERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY--- 330
+YN LI+GYCK G +++A+ + + M R + ++ T+ LI +CK KA+ +
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM 453
Query: 331 ---KNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACDPDVALVRNQ 375
K D+ + L+DG ++G + A R+ L D LV +Q
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN----DRGLVPDQ 497
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 179/395 (45%), Gaps = 40/395 (10%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ G C+S +A + L + LV P+ Y ++I LCK V +A L +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE--------NSLDVCSFNIIMDALCKQ 113
Q+G+ P+VV +++LI G+C A + E L+L + NSL +FN ++ LC
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL---TFNALIHGLCAD 580
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G L EA + +M+K G+QP V + TIL+ D A F M+ +G PD +Y
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
IQ YC+ R+ +A ++ M + P+ TY L G G+ A++ L RM
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 234 RGHRPPDLTPYNIILETLCEQH------------------LDKANKIFNSLIPE---PNV 272
G P T ++I L ++ D ++ ++ PN
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 273 QSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE-TFKLLINAFCKRKQCDKAIALYK 331
+SY LI G C+ G + A ++ +M + SE F L++ CK K+ ++A +
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVD 820
Query: 332 NN------RDLCPFKILMDGLRKNGMEEVAQRVSQ 360
+ L K+L+ GL K G +E V Q
Sbjct: 821 DMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 161/381 (42%), Gaps = 63/381 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++ LCKSK A LE + V PN+V+Y +I G CK G V++A + +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-------------------------- 95
+ + P+ +TF++LI+G C + KE LL +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 96 --------------NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
D ++ + C++G LL+A + +M + GV PD+ +Y+ L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE----------------- 184
+ GY + + A + M + G P ++ LI+ +++
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 185 -RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
D + L E M+ ++ PNA +Y+ L G+C G L A M P
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 244 YNIILETLCE-QHLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMC 299
+N +L C+ + ++A K+ + +I P ++S +LI G K G + S++QN+
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 300 LRNIVRDSETFKLLINAFCKR 320
D +K++I+ K+
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQ 879
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 25/243 (10%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI-------YG---- 79
V P+L Y+++I G G N A + M G P TF SLI YG
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 80 ----FCHADQWKE----VRLL--LNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMI 127
C E V LL + E+S+ + S+ ++ +C+ G L A V M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 128 K-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
+ G+ P + + L+ C K ++A K+ D MI G +P + S +LI G K
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+ ++ +++L + + +K + DG+ + G + + M G + T Y++
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT-YSL 906
Query: 247 ILE 249
++E
Sbjct: 907 LIE 909
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 179/338 (52%), Gaps = 12/338 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ L K A T + +EA V ++ Y T+++ LCK+G A+ S++
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFV-VGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC------SFNIIMDALCKQGL 115
++ G D +SL+ GFC ++ + + S +V S++I++ LC+ G
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L EA + +M ++G QP +YT+L+ C + +DKA LFD MI G P+V +Y +
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G C+ +++EA +C M+ + P+ +TY L +G C+ GR+ A+ LT M R
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 236 HRPPDLTPYNIILETLCEQHLD-KANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
+ P++ +N ++E LC KA + ++ P++ SYN+LI G C+ G ++ A
Sbjct: 402 CK-PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ +M +I D TF +INAFCK+ + D A A
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 46/395 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GLC+ A + L + ++P+ + + +I+ CK G + A M
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFD-IEPDCLTFTAIINAFCKQGKADVASAFLGLM 502
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----------VRLLLNENSLDVCSFNIIMDALC 111
+++GI D VT ++LI G C + ++ +R+L +SL N+I+D L
Sbjct: 503 LRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL-----NVILDMLS 557
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
K + E A+ ++ K G+ P V++YT L+DG + + ++ ++M +G +P+V+
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
Y I+I G C+ RV+EA L M + PN VTY + G G+L A + M
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Query: 232 HYRGHRPPDLTPYNIILE--TLCEQHLDKANK--IFNSLIPEPNVQSYNILIS------- 280
RG+ D Y+ +L+ L ++ +D + + + + + E + + N LIS
Sbjct: 678 VERGYELNDRI-YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGG 736
Query: 281 -----------GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK---QCDKA 326
CK GR DE+ + QN+ R + + + +++ ++C +K +C +
Sbjct: 737 CISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMEL 795
Query: 327 IALYKNNRDLCPFK---ILMDGLRKNGMEEVAQRV 358
I L + + FK +++ GL+K G E A+ +
Sbjct: 796 ITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 180/398 (45%), Gaps = 50/398 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GLC+ G L++ + +P+ Y +I LC GL++KA L EM
Sbjct: 269 YSILIHGLCEV-GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
I RG P+V T++ LI G C + +E +++ + V ++N +++ CK G +
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ A + M KR +P+V ++ LM+G C K KA L M++ GL PD+ SYN+L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G C+ ++ A L M ++ P+ +T+ + + C+ G+ A FL M +G
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 237 RPPDLTPYNI---------------ILETLCEQH--------------LDKANKI----- 262
++T + ILETL + L K K+
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 263 ----FNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
N L P+V +Y L+ G ++G + + I + M L + + + ++IN C
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 319 KRKQCDKAIALYKNNRD--LCP----FKILMDGLRKNG 350
+ + ++A L +D + P + +++ G NG
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 23/265 (8%)
Query: 104 NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
N ++ + GL AHAV +IK + + ++ YC D+ R++F
Sbjct: 107 NQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLM---YCF----DELREVF----- 154
Query: 164 AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPD 223
G + Y+ L+ K++ A M V + Y+ + + LC+ G
Sbjct: 155 -GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213
Query: 224 AWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE----PNVQSYNILI 279
A F++++ G +++L +L A K+F+ + E PN SY+ILI
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 280 SGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------N 333
G C+ GR++EA + M + + T+ +LI A C R DKA L+
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 334 RDLCPFKILMDGLRKNGMEEVAQRV 358
++ + +L+DGL ++G E A V
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGV 358
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 68/263 (25%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVK--PNLVIYNTVIHGLCKDGLVNKAQKLCS 59
Y TL+ GL +S G+ + + LE ++L PN+ Y +I+GLC+ G V +A+KL S
Sbjct: 584 YTTLVDGLIRS---GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 60 EMIQRGIFPDVVTF-----------------------------------SSLIYGFC--- 81
M G+ P+ VT+ SSL+ GF
Sbjct: 641 AMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQ 700
Query: 82 ----HADQWKEVRLLLNENSLD------------------VCSFNIIMDALCKQGLLLEA 119
++++ + L E + +C F ++ LCK+G E+
Sbjct: 701 KGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCKEGRTDES 758
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ + +++RGV + + I+M+ YC K K K +L +++++G VP S+ ++IQG
Sbjct: 759 NDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQG 817
Query: 180 YCKIERVDEAMNLCEDMLTKNLV 202
K + A L ++LT N V
Sbjct: 818 LKKEGDAERARELVMELLTSNGV 840
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 191/402 (47%), Gaps = 73/402 (18%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G L+ G CK+ + ++ L +E+ ++ PN VIYNT++ C++G + ++K+ +M
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVL-PNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 62 IQRGIFPDVVTFSS---------------------------------------LIYGFCH 82
+ G+ PD+VTF+S ++ GFC
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 83 ADQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
++ + L N++ + S+NI + L + G +EA V +M +G+ P + S
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
Y ILMDG C + A+ + +M G+ PD +Y L+ GYC + +VD A +L ++M+
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHL 256
N +PNA T L L + GR+ +A L +M+ +G+ D NII++ LC L
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY-GLDTVTCNIIVDGLCGSGEL 482
Query: 257 DKANKIF-----------------------NSLIPE---PNVQSYNILISGYCKNGRVDE 290
DKA +I +SLI P++ +Y+ L++G CK GR E
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
A +++ M + DS + + I+ FCK+ + A + K+
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 172/348 (49%), Gaps = 45/348 (12%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P++ YN ++ GLCK G+++ A+ + M + G+ PD VT+ L++G+C + +
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 91 LLLNENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
LL E + C + NI++ +L K G + EA + +M ++G D ++ I++DG
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Query: 146 CLKCKVDKARKLF-----------------------DMMIEAGLVPDVWSYNILIQGYCK 182
C ++DKA ++ D +IE +PD+ +Y+ L+ G CK
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG-HRPPDL 241
R EA NL +M+ + L P++V Y C+ G++ A+ L M +G H+ L
Sbjct: 537 AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK--SL 594
Query: 242 TPYNIILETLCEQHLDKANKIF--NSLIPE-------PNVQSYNILISGYCKNGRVDEAM 292
YN ++ L + N+IF + L+ E PN+ +YN I C+ +V++A
Sbjct: 595 ETYNSLILGLGIK-----NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFK 340
++ M +NI + +FK LI AFCK D A +++ +C K
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQK 697
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 168/339 (49%), Gaps = 20/339 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P +N +I LC V+ A++L EM ++G P+ TF L+ G+C A +
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 91 LLLNE-NSLDVCS----FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
LLN S V +N I+ + C++G ++ + +M + G+ PD++++ +
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 146 CLKCKVDKARKLF-DMMIEAGL---VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
C + KV A ++F DM ++ L P+ +YN++++G+CK+ +++A L E + +
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
+ + +Y GL R G+ +A L +M +G P + YNI+++ LC+ + K
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG-IGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 262 IFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
L+ P+ +Y L+ GYC G+VD A S+ Q M N + ++ T +L+++
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 318 CKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
K + +A L + D I++DGL +G
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 165/334 (49%), Gaps = 23/334 (6%)
Query: 57 LCSEMIQRGIFPDVVTFSSLIYGFCHAD----QWKEVRLLLNENSLDVCSFNIIMDALCK 112
+ S IQ+ +++ S+ H D Q++ VR EN V +N+++++ K
Sbjct: 65 ILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIK 124
Query: 113 QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWS 172
+ + + +M+ G+ P ++ +L+ C VD AR+LFD M E G P+ ++
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
+ IL++GYCK D+ + L M + ++PN V Y + CR GR D+ + +M
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244
Query: 233 YRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSL-------IPEPNVQSYNILISGYCK 284
G PD+ +N + LC E + A++IF+ + +P PN +YN+++ G+CK
Sbjct: 245 EEG-LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD------LCP 338
G +++A ++++++ + + +++ + + + + +A + K D +
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 339 FKILMDGLRKNGMEEVAQRVSQLY---GACDPDV 369
+ ILMDGL K GM A+ + L G C PD
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDA 396
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 14/311 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
KP++ +YN ++ K+ V L +M+ GI P TF+ LI C + R
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 92 LLNENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L +E C +F I++ CK GL + + M GV P+ + Y ++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV---- 202
+ + D + K+ + M E GLVPD+ ++N I CK +V +A + DM +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANK 261
PN++TY + G C+ G L DA + L YNI L+ L +A
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIR-ENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+ + + P++ SYNIL+ G CK G + +A +I M + D+ T+ L++ +C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 319 KRKQCDKAIAL 329
+ D A +L
Sbjct: 408 SVGKVDAAKSL 418
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 36/319 (11%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEM-----------------------IQRGIFPDV 70
+ V N ++ GLC G ++KA ++ M I+ PD+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 71 VTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYE 125
+T+S+L+ G C A ++ E + L E D ++NI + CKQG + A V +
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M K+G + +Y L+ G +K ++ + L D M E G+ P++ +YN IQ C+ E+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN-FLTRMHYRGHRPPDLTPY 244
V++A NL ++M+ KN+ PN ++KYL + C+ A F T + G + Y
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE---GLY 701
Query: 245 NIIL-ETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCL 300
+++ E L L KA ++ +++ E Y L+ CK ++ A I M
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 301 RNIVRDSETFKLLINAFCK 319
R D +I+ K
Sbjct: 762 RGYGFDPAALMPVIDGLGK 780
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 40/269 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++GLCK+ A E+ +L +P+ V YN IH CK G ++ A ++ +M
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKL-QPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
++G + T++SLI G +Q E+ L++E S ++C++N + LC+ +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD------------------------ 152
+A + EM+++ + P+V S+ L++ +C D
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705
Query: 153 ----------KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
KA +L + +++ G + Y L++ CK + ++ A + M+ +
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
+ + DGL + G +A +F +M
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ PN+ YNT I LC+ V A L EM+Q+ I P+V +F LI FC + +
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 91 LLLNENSLDVCS-----FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ E ++ +C ++++ + L G LL+A + ++ RG + Y L++
Sbjct: 685 EVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESL 743
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
C K +++ A + MI+ G D + +I G K+ EA + + M+
Sbjct: 744 CKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 188/373 (50%), Gaps = 18/373 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T+M G + A++ +++ N+ + N ++HG CK+G V A EM
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDALNFIQEM 285
Query: 62 I-QRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNEN-SLDVCSFNIIMDALCKQGL 115
Q G FPD TF++L+ G C A K + ++L E DV ++N ++ LCK G
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ EA V +MI R P+ ++Y L+ C + +V++A +L ++ G++PDV ++N
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LIQG C AM L E+M +K P+ TY L D LC G+L +A N L +M G
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 236 HRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEA 291
+T YN +++ C+ + + A +IF+ + N +YN LI G CK+ RV++A
Sbjct: 466 CARSVIT-YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCK----RKQCDKAIALYKNN--RDLCPFKILMDG 345
+ M + D T+ L+ FC+ +K D A+ N D+ + L+ G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 346 LRKNGMEEVAQRV 358
L K G EVA ++
Sbjct: 585 LCKAGRVEVASKL 597
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 27/374 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++SGLCK A++ L ++ + PN V YNT+I LCK+ V +A +L +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC-----SFNIIMDALCKQGLL 116
+GI PDV TF+SLI G C + L E C ++N+++D+LC +G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + +M G VI+Y L+DG+C K +A ++FD M G+ + +YN L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK RV++A L + M+ + P+ TY L CR G + A + + M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNS-------LIPEPNVQSYNILISGYCKNGRV 288
PD+ Y ++ LC+ ++ A+K+ S L P +YN +I G + +
Sbjct: 572 E-PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP----HAYNPVIQGLFRKRKT 626
Query: 289 DEAMSIYQNMCLRNIV-RDSETFKLLINAFCK-----RKQCDKAIALYKNN--RDLCPFK 340
EA+++++ M +N D+ +++++ C R+ D + L + +
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 341 ILMDGLRKNGMEEV 354
+L +GL MEE
Sbjct: 687 MLAEGLLTLSMEET 700
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 181/383 (47%), Gaps = 53/383 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+KP+ YN +++ L + + ++M GI PDV TF+ LI C A Q +
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 91 LLL-----------------------NENSLDVC-----------------SFNIIMDAL 110
L+L E LD S N+I+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 111 CKQGLLLEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
CK+G + +A EM + G PD ++ L++G C V A ++ D+M++ G PD
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT 229
V++YN +I G CK+ V EA+ + + M+T++ PN VTY L LC+ ++ +A
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 230 RMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKN 285
+ +G PD+ +N +++ LC ++ A ++F + EP+ +YN+LI C
Sbjct: 390 VLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPF 339
G++DEA+++ + M L R T+ LI+ FCK + +A ++ +R+ +
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 340 KILMDGL-RKNGMEEVAQRVSQL 361
L+DGL + +E+ AQ + Q+
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQM 531
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 167/357 (46%), Gaps = 24/357 (6%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE---- 88
P +Y ++ L + G + +K+ +M TF LI + + E
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 89 VRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
V +++E L D +N +++ L L +M G++PDV ++ +L+ C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
++ A + + M GLVPD ++ ++QGY + +D A+ + E M+ + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
+ + G C+ GR+ DA NF+ M + PD +N ++ LC+ H+ A +I +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
++ E P+V +YN +ISG CK G V EA+ + M R+ ++ T+ LI+ CK Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 323 CDKAIALYK--NNR----DLCPFKILMDGL-----RKNGMEEVAQRVSQLYGACDPD 368
++A L + ++ D+C F L+ GL + ME + S+ C+PD
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK---GCEPD 434
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 177/377 (46%), Gaps = 49/377 (12%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V PN+ YN +I G C G ++ A L +M +G P+VVT+++LI G+C + +
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
LL +L ++ S+N++++ LC++G + E V EM +RG D ++Y L+ GY
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + +A + M+ GL P V +Y LI CK ++ AM + M + L PN
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP--------------------------- 238
TY L DG + G + +A+ L M+ G P
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 239 -------PDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
PD+ Y+ +L C + +D+A ++ ++ +P+ +Y+ LI G+C+ R
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN------RDLCPFKI 341
EA +Y+ M + D T+ LINA+C +KA+ L+ D+ + +
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 342 LMDGLRKNGMEEVAQRV 358
L++GL K A+R+
Sbjct: 561 LINGLNKQSRTREAKRL 577
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 185/347 (53%), Gaps = 24/347 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ +CK+ A++ L ++ L PN Y T++ G + G +N+A ++ EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
G P VVT+++LI G C + ++ +L + S DV S++ ++ C+ +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V EM+++G++PD I+Y+ L+ G+C + + +A L++ M+ GL PD ++Y L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I YC +++A+ L +M+ K ++P+ VTY L +GL + R +A L ++ Y
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 237 RPPDLTPYNII--------------LETLC-EQHLDKANKIFNSLI---PEPNVQSYNIL 278
P D+T + +I ++ C + + +A+++F S++ +P+ +YNI+
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 279 ISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
I G+C+ G + +A ++Y+ M + + T L+ A K + ++
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 129/241 (53%), Gaps = 6/241 (2%)
Query: 100 VCSFNIIMDALCKQGLLLE-AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
V S+N ++DA + + A V EM++ V P+V +Y IL+ G+C +D A LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
D M G +P+V +YN LI GYCK+ ++D+ L M K L PN ++Y + +GLCR
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQS 274
GR+ + LT M+ RG+ ++T YN +++ C E + +A + ++ P+V +
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVT-YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR 334
Y LI CK G ++ AM M +R + + T+ L++ F ++ ++A + +
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 335 D 335
D
Sbjct: 408 D 408
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 53/270 (19%)
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV--------------------------- 170
+ +++ Y +DKA + + G +P V
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 171 ---------WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
++YNILI+G+C +D A+ L + M TK +PN VTY L DG C+ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQ-------S 274
D + L M +G P+L YN+++ LC + K + ++ E N + +
Sbjct: 257 DDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKE---VSFVLTEMNRRGYSLDEVT 312
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN- 333
YN LI GYCK G +A+ ++ M + T+ LI++ CK ++A+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 334 -RDLCP----FKILMDGLRKNGMEEVAQRV 358
R LCP + L+DG + G A RV
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 21/261 (8%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ G C+ + + A +E+ + L P+ Y +I+ C +G + KA +L +EM
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGL-PPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL--------------------NENSLDVC 101
+++G+ PDVVT+S LI G + +E + LL N ++++
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
S ++ C +G++ EA V M+ + +PD +Y I++ G+C + KA L+ M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+++G + + L++ K +V+E ++ +L + A K L + R G +
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726
Query: 222 PDAWNFLTRMHYRGHRPPDLT 242
+ L M G P ++
Sbjct: 727 DVVLDVLAEMAKDGFLPNGIS 747
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 193/373 (51%), Gaps = 26/373 (6%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
LM L K S + +E+ + ++PN+ +N VI+ LCK G +NKA+ + +M
Sbjct: 194 LMIALLKENRSADVEYVYKEM-IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 65 GIFPDVVTFSSLIYGFC----HADQWKEVRLLL----NENSLDVCSFNIIMDALCKQGLL 116
G P+VV++++LI G+C + +K +L N+ S ++ +FNI++D K L
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ V EM+ + V+P+VISY L++G C K+ +A + D M+ AG+ P++ +YN L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK + + EA+++ + + VP Y L D C+ G++ D + M G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMS 293
PD+ YN ++ LC +++ A K+F+ L + P++ +++IL+ GYC+ G +A
Sbjct: 433 -VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCK----------RKQCDKAIALYKNNRDLCPFKILM 343
+ + M + T+ +++ +CK R Q +K L N + + +L+
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMN---VASYNVLL 548
Query: 344 DGLRKNGMEEVAQ 356
G + G E A
Sbjct: 549 QGYSQKGKLEDAN 561
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 181/338 (53%), Gaps = 16/338 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCK---DGLVNKAQKLC 58
+ +++ LCK+ G N + + E + PN+V YNT+I G CK +G + KA +
Sbjct: 226 FNVVINALCKT-GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHAD----QWKEVRLLLNEN-SLDVCSFNIIMDALCKQ 113
EM++ + P++ TF+ LI GF D K + +L+++ +V S+N +++ LC
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G + EA ++ +M+ GVQP++I+Y L++G+C + +A +F + G VP Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N+LI YCK+ ++D+ L E+M + +VP+ TY L GLCR G + A ++
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 234 RGHRPPDLTPYNIILETLCEQHLDKAN----KIFNSLIPEPNVQSYNILISGYCKNGRVD 289
+G PDL ++I++E C + + K + + +P +YNI++ GYCK G +
Sbjct: 465 KGL--PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 290 EAMSIYQNMCLRNIVR-DSETFKLLINAFCKRKQCDKA 326
A ++ M +R + ++ +L+ + ++ + + A
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 152/287 (52%), Gaps = 17/287 (5%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
L S +M AL K+ + V EMI+R +QP+V ++ ++++ C K++KAR +
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKI---ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
+ M G P+V SYN LI GYCK+ ++ +A + ++M+ ++ PN T+ L DG
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-----EQHLDKANKIFNSLIPE 269
+ LP + M + + P++ YN ++ LC + + +K+ ++ + +
Sbjct: 306 FWKDDNLPGSMKVFKEMLDQDVK-PNVISYNSLINGLCNGGKISEAISMRDKMVSAGV-Q 363
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
PN+ +YN LI+G+CKN + EA+ ++ ++ + V + + +LI+A+CK + D AL
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 330 YKNNR------DLCPFKILMDGLRKNGMEEVAQRV-SQLYGACDPDV 369
+ D+ + L+ GL +NG E A+++ QL PD+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL 470
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 122/227 (53%), Gaps = 6/227 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++G CK+ A+ ++ Q P +YN +I CK G ++ L EM
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKG-QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL----DVCSFNIIMDALCKQGLLL 117
+ GI PDV T++ LI G C + + L ++ + D+ +F+I+M+ C++G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESR 487
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM-IEAGLVPDVWSYNIL 176
+A + EM K G++P ++Y I+M GYC + + A + M E L +V SYN+L
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPD 223
+QGY + ++++A L +ML K LVPN +TY+ + + + G +PD
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 193/375 (51%), Gaps = 17/375 (4%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
MYG + K G ++ ++ + P++ IYN +I GLCK +N A++L E
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKH-DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 61 MIQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSLD--VCSFNIIMDALCKQGL 115
M+ R + P ++T+++LI G+C A ++ +VR + + ++ + +FN ++ L K G+
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ +A V EM G PD +++IL DGY K + A +++ +++G+ + ++ +I
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ CK ++++A + + K LVPN V Y + DG CR G L A + M +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 236 HRPPDLTPYNIILETLCE-QHLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEA 291
+P L YN ++ CE ++ A K N + P+V++YNILI GY + D+
Sbjct: 420 MKPDHLA-YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP----FKILMDG 345
I + M + + ++ LIN CK + +A + ++ +R + P + +L+DG
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 346 LRKNGMEEVAQRVSQ 360
G E A R S+
Sbjct: 539 CCSKGKIEDAFRFSK 553
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
VK N + +++ LCK+G + KA+++ + +G+ P+ V ++++I G+C R
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ + D ++N ++ C+ G + A +M +GV P V +Y IL+ GY
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
K + DK + M + G +P+V SY LI CK ++ EA + DM + + P
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFN 264
Y L DG C G++ DA+ F M +G +L YN +++ L L +A +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE-LNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
+ +P+V +YN LISGY G V +++Y+ M I +T+ LLI+
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 160/371 (43%), Gaps = 82/371 (22%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEAL--QLVKPNLVIYNTVIHGLCKDGLVNKAQKLC 58
+Y T++ G C+ G+ + ++EA+ Q +KP+ + YN +I C+ G + A+K
Sbjct: 391 IYNTMIDGYCRK---GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQ 113
++M +G+ P V T++ LI G+ ++ + +L E +V S+ +++ LCK
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
LLEA V +M RGV P V Y +L+DG C K K++ A + M++ G+ ++ +Y
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N LI G ++ EA +L ++ K L P+ TY L G G + M
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 234 RGHRP------------------------------PDLTPYNIILE------------TL 251
G +P PDL YN +L L
Sbjct: 628 SGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Query: 252 CEQHLDKA----NKIFNSLI-----------------------PEPNVQSYNILISGYCK 284
+Q ++K+ +NSLI EP +YNI++ G+C+
Sbjct: 688 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE 747
Query: 285 NGRVDEAMSIY 295
V + MS Y
Sbjct: 748 ---VKDYMSAY 755
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 5/229 (2%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
S +++D L K V +++ +P Y + V K +LF+ M
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+ P V+ YN+LI G CK +R+++A L ++ML + L+P+ +TY L DG C+ G
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL--DKAN--KIFNSLIPEPNVQSYNI 277
++ RM H P L +N +L+ L + + D N K L P+ +++I
Sbjct: 266 EKSFKVRERMK-ADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
L GY N + + A+ +Y+ + ++ T +L+NA CK + +KA
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 10/240 (4%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+ G C +A + +E+ + ++ NLV YNT+I GL G +++A+ L E
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEM-LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLD-----VCSFNIIMDALCKQGL 115
+ ++G+ PDV T++SLI G+ A + L E + ++++++ K+G+
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L + EM ++PD++ Y ++ Y + ++KA L MIE + D +YN
Sbjct: 650 EL-TERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G K+ ++ E +L ++M + + P A TY + G C A+ + M +G
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 197/406 (48%), Gaps = 54/406 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L++G C +A+ L+ + + V P+ V YNT++ + K G ++ ++L +M
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSL-DVCSFNIIMDALCKQGLL 116
+ G+ P+ VT+++L+YG+C KE V L+ N L D+C++NI+++ LC G +
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLK---------------------------- 148
E + M +QPDV++Y L+DG C +
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 149 -----CKVDK----ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
CK +K RK+ +++ G PD+ +Y+ LI+ Y K+ + A+ + +M K
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA 259
+ N +T + D LC+ +L +A N L H RG ++T +I+ E+ ++KA
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 260 NKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++++ + P V ++N LI G C +G+ + AM + + ++ D TF +I
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 317 FCKRKQCDKAIALYKNNRDLCPFK-------ILMDGLRKNGMEEVA 355
+CK + +KA Y N FK IL++GL K GM E A
Sbjct: 566 YCKEGRVEKAFEFY-NESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 196/387 (50%), Gaps = 21/387 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++GLC + ++ + +++L+L +P++V YNT+I G + GL +A+KL +M
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKL-QPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE------NSLDVCSFNIIMDALCKQGL 115
G+ + VT + + C ++ + V + E S D+ +++ ++ A K G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A + EM ++G++ + I+ ++D C + K+D+A L + + G + D +Y
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G+ + E+V++A+ + ++M + P T+ L GLC G+ A + G
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P D T +IIL E ++KA + +N I +P+ + NIL++G CK G ++A+
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP--------FKIL 342
+ + + V D+ T+ +I+AFCK K+ +A L + L P +L
Sbjct: 612 NFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 343 MDGLRKNGMEEVAQRVSQLYGACDPDV 369
M+ + + +E+ ++ S +G+ D+
Sbjct: 671 MEDGKLSETDELLKKFSGKFGSMKRDL 697
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 173/323 (53%), Gaps = 16/323 (4%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCK---DGLVNKAQKLCSEMIQRGIFPDVVTFS 74
A+Q Q++ L+L KPNL+ NT++ GL + ++ A+++ +M++ G+ +V TF+
Sbjct: 150 ALQIFQKMIRLKL-KPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFN 208
Query: 75 SLIYGFCHADQWKEVRLLLN------ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIK 128
L+ G+C + ++ +L + + D ++N I+ A+ K+G L + + +M K
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 129 RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDE 188
G+ P+ ++Y L+ GYC + +A ++ ++M + ++PD+ +YNILI G C + E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 189 AMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL 248
+ L + M + L P+ VTY L DG G +A + +M G + +T +NI L
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVT-HNISL 387
Query: 249 ETLC-EQHLDKANKIFNSLIP----EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
+ LC E+ + + L+ P++ +Y+ LI Y K G + A+ + + M + I
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 304 VRDSETFKLLINAFCKRKQCDKA 326
++ T +++A CK ++ D+A
Sbjct: 448 KMNTITLNTILDALCKERKLDEA 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 137/300 (45%), Gaps = 18/300 (6%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
T++ LCK + A L + + V Y T+I G ++ V KA ++ EM +
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFI-VDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 64 RGIFPDVVTFSSLIYGFCHADQWK---EVRLLLNENSL--DVCSFNIIMDALCKQGLLLE 118
I P V TF+SLI G CH + + E L E+ L D +FN I+ CK+G + +
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A E IK +PD + IL++G C + +KA F+ +IE V D +YN +I
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMIS 633
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR-GHR 237
+CK +++ EA +L +M K L P+ TY L G+L + L + + G
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSM 693
Query: 238 PPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQN 297
DL +ET ++ + N+ +Y+ +I C GR+ E Y +
Sbjct: 694 KRDLQ-----VETEKNPATSESKEELNT-----EAIAYSDVIDELCSRGRLKEHSRSYTS 743
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFD----GLCRFGRLPDAWNFLTRMHYRGHRP 238
I D +++LC +L NL + K LFD G+ A +M R
Sbjct: 105 IRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKM-IRLKLK 163
Query: 239 PDLTPYNIILETLCEQ----HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
P+L N +L L + A ++F+ ++ NVQ++N+L++GYC G++++A
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 292 MSIYQNMCLRNIVR-DSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNG 350
+ + + M V D+ T+ ++ A K+ + L K L+ ++KNG
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGR-------------LSDLKELLLDMKKNG 270
Query: 351 MEEVAQRVSQ---LYGAC 365
+ V RV+ +YG C
Sbjct: 271 L--VPNRVTYNNLVYGYC 286
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 176/347 (50%), Gaps = 16/347 (4%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+++ LC++ AI +++ L KPNL+ + ++I GLCK G + +A ++ EM++
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 316
Query: 65 GIFPDVVTFSSLIYGFCHADQWKE--VRLLLNENSLD-----VCSFNIIMDALCKQGLLL 117
G P+V T ++LI G C W E RL L D V ++ ++ CK+ L
Sbjct: 317 GWKPNVYTHTALIDGLCKRG-WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
A + M ++G+ P+V +YT L++G+C +A +L ++M + G +P++++YN I
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
CK R EA L + L + VTY L C+ + A F RM+ G
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 495
Query: 238 PPDLTPYNIILETLCEQ-HLDKANKIFN---SLIPEPNVQSYNILISGYCKNGRVDEAMS 293
D+ NI++ C Q + ++ ++F SL P ++Y +IS YCK G +D A+
Sbjct: 496 -ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP 338
+ NM V DS T+ LI+ CK+ D+A LY+ +R L P
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 37/333 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ GLCK + A + +L KPN+ Y ++I G CK+ +N+A+ L S M
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 384
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN----ENSL-DVCSFNIIMDALCKQGLL 116
++G+FP+V T+++LI G C A + L+N E + ++ ++N +D+LCK+
Sbjct: 385 KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 444
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ + + G++ D ++YTIL+ C + +++A F M + G D+ NIL
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNIL 504
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I +C+ +++ E+ L + +++ L+P TY + C+ G + A + M G
Sbjct: 505 IAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGC 564
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQ 296
P T Y LISG CK VDEA +Y+
Sbjct: 565 VPDSFT--------------------------------YGSLISGLCKKSMVDEACKLYE 592
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
M R + T L +CKR A+ L
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 34/305 (11%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
Q + P+ + N V+ + GL+ A+ + EM RG+ PD ++ ++ G C D
Sbjct: 176 QGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIG-CFRD---- 230
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
G + EA MI+RG PD + T+++ C
Sbjct: 231 -------------------------GKIQEADRWLTGMIQRGFIPDNATCTLILTALCEN 265
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
V++A F MI+ G P++ ++ LI G CK + +A + E+M+ PN T+
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLI 267
L DGLC+ G A+ ++ P++ Y ++ C E L++A +F+ +
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 268 PE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
+ PNV +Y LI+G+CK G A + M + + T+ I++ CK+ +
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 325 KAIAL 329
+A L
Sbjct: 446 EAYEL 450
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIFNSLIPE---PNVQS 274
GRL +A + M +G P +T N +LE E L + A +F+ + P+ S
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSIT-MNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR 334
Y +++ G ++G++ EA M R + D+ T L++ A C+ ++AI ++
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 335 D------LCPFKILMDGLRKNG 350
D L F L+DGL K G
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKG 301
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 44/370 (11%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
+L++G C S +A+ ++E + +K ++V+ +I LCK+ LV A ++ M
Sbjct: 18 SLVNGFCLSNSIKDAVYVAGQMEKMG-IKRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 76
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVC 123
RGI P+VVT+SSLI G LCK G L +A
Sbjct: 77 RGISPNVVTYSSLITG------------------------------LCKSGRLADAERRL 106
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
+EM + + P+VI+++ L+D Y + K+ K ++ MMI+ + P+V++Y+ LI G C
Sbjct: 107 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 166
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
RVDEA+ + + M++K PN VTY L +G + R+ D L M RG ++
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 226
Query: 244 YNIILETLCEQHLDKANKIF-----NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+I +D A +F N LI PN++SYNI+++G NG V++A+S +++M
Sbjct: 227 NTLIKGYFQAGKIDLALGVFGYMTSNGLI--PNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALY------KNNRDLCPFKILMDGLRKNGME 352
D T+ ++I+ CK +A L+ + D + I++ L + GM
Sbjct: 285 QKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMR 344
Query: 353 EVAQRVSQLY 362
A +++ Y
Sbjct: 345 TEADALNRFY 354
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 38/312 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++GLCKS +A + L E+++ + + PN++ ++ +I K G ++K + M
Sbjct: 86 YSSLITGLCKSGRLADAERRLHEMDS-KKINPNVITFSALIDAYAKRGKLSKVDSVYKMM 144
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
IQ I P+V T+SSLIYG C ++ E +L+
Sbjct: 145 IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD--------------------------- 177
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
MI +G P+V++Y+ L +G+ +VD KL D M + G+ + S N LI+GY
Sbjct: 178 ---LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ ++D A+ + M + L+PN +Y + GL G + A + M + D+
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ-KTRNDLDI 293
Query: 242 TPYNIILETLCEQ-HLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQN 297
Y I++ +C+ + +A +F L EP+ ++Y I+I+ + G EA ++ N
Sbjct: 294 ITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL--N 351
Query: 298 MCLRNIVRDSET 309
+ VR +E+
Sbjct: 352 RFYQKHVRQNES 363
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
+M+K G++PD+++ + L++G+CL + A + M + G+ DV ILI CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
V A+ + + M + + PN VTY L GLC+ GRL DA L M + P +T
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 245 NIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+I L K + ++ +I +PNV +Y+ LI G C + RVDEA+ + M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ T+ L N F K + D I L
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKL 210
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 181/377 (48%), Gaps = 50/377 (13%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
TL++G CK A + +E + ++P+L+ Y+T+I G K G++ KL S+ +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQ-RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLE 118
+G+ DVV FSS I + + R+L S +V ++ I++ LC+ G + E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + +++KRG++P +++Y+ L+DG+C + L++ MI+ G PDV Y +L+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL----------------P 222
G K + AM ML +++ N V + L DG CR R P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 223 DAWNFLTRMH-------YRGHRPP-----------------DLTPYNIILETLCEQH-LD 257
D F T M + H P D+ N+++ L + H ++
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 258 KANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
A+K FN+LI EP++ +YN +I GYC R+DEA I++ + + ++ T +LI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 315 NAFCKRKQCDKAIALYK 331
+ CK D AI ++
Sbjct: 650 HVLCKNNDMDGAIRMFS 666
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 88/390 (22%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
Q + PN+V Y +I GLC+DG + +A + ++++RG+ P +VT+SSLI GFC +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 89 VRLLLNENSL------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKR------------- 129
L E+ + DV + +++D L KQGL+L A +M+ +
Sbjct: 445 -GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 130 ----------------------GVQPDVISYTILM------DGYC--------------- 146
G++PDV ++T +M D +C
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 147 -------------------LKC-KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
KC +++ A K F+ +IE + PD+ +YN +I GYC + R+
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
DEA + E + PN VT L LC+ + A + M +G +P +T Y
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT-YGC 682
Query: 247 ILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+++ + ++ + K+F + + P++ SY+I+I G CK GRVDEA +I+
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYKN 332
++ D + +LI +CK + +A LY++
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEH 772
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 147/309 (47%), Gaps = 43/309 (13%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN+V + T+I+G CK G +++A L M QRGI PD++ +S+LI G+ A L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 93 LNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
++ LDV F+ +D K G L A V M+ +G+ P+V++YTIL+ G C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++ +A ++ +++ G+ P + +Y+ LI G+CK + L EDM+ P+ V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
Y L DGL + G + A F +M + R
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIR------------------------------ 493
Query: 268 PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI------NAFCKRK 321
NV +N LI G+C+ R DEA+ +++ M + I D TF ++ +AFCK
Sbjct: 494 --LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 322 QCDKAIALY 330
+ + L+
Sbjct: 552 KPTIGLQLF 560
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 175/332 (52%), Gaps = 18/332 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+YG L+ GL K +A++ ++ Q ++ N+V++N++I G C+ ++A K+
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLG-QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 61 MIQRGIFPDVVTFSSLIY------GFC-HADQWKEVRLL----LNENSLDVCSFNIIMDA 109
M GI PDV TF++++ FC H ++L N+ S D+ N+++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 110 LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
L K + +A +I+ ++PD+++Y ++ GYC ++D+A ++F+++ P+
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT 229
+ ILI CK +D A+ + M K PNAVTY L D + + ++
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 230 RMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKN 285
M +G P + Y+II++ LC++ +D+A IF+ I P+V +Y ILI GYCK
Sbjct: 702 EMQEKGI-SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
GR+ EA +Y++M LRN V+ + + ++ +
Sbjct: 761 GRLVEAALLYEHM-LRNGVKPDDLLQRALSEY 791
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 134/269 (49%), Gaps = 10/269 (3%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
V + ++DAL +G + +A +++RG + ++S ++ G + +++ A +L
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLS 275
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
++++ G P+V ++ LI G+CK +D A +L + M + + P+ + Y L DG + G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYN 276
L ++ ++G + + + I + L A+ ++ ++ + PNV +Y
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 277 ILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN---- 332
ILI G C++GR+ EA +Y + R + T+ LI+ FCK ALY++
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 333 --NRDLCPFKILMDGLRKNGMEEVAQRVS 359
D+ + +L+DGL K G+ A R S
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIK--------------RGVQPDVISYTILMDGYCL 147
SF I L + G+ A V EMI R + DV + LM+ C
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCR 158
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
VDKA ++F + G+V S ++ +RVD + + + + P+ V+
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 208 -YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
+ ++ D L G + A +F + RG R + N +L+ L ++ A+++ + +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFR-VGIVSCNKVLKGLSVDQIEVASRLLSLV 277
Query: 267 I---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ P PNV ++ LI+G+CK G +D A +++ M R I D + LI+ + K
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 184/359 (51%), Gaps = 25/359 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y LM+GL + +A + + +E+ + +KP++V YNT+I G CK G KA + +M
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGR-IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM 283
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQ--------WKEVRLLLNENSLDVC--SFNIIMDALC 111
RG D +T+ ++I C+AD ++E ++E + V +F++++ LC
Sbjct: 284 ETRGHEADKITYMTMIQA-CYADSDFGSCVALYQE----MDEKGIQVPPHAFSLVIGGLC 338
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
K+G L E + V MI++G +P+V YT+L+DGY V+ A +L MI+ G PDV
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
+Y++++ G CK RV+EA++ L N++ Y L DGL + GR+ +A M
Sbjct: 399 TYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 232 HYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPEP----NVQSYNILISGYCKNG 286
+G D YN +++ + +D+A +F + E V +Y IL+SG K
Sbjct: 459 SEKGC-TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDG 345
R +EA+ ++ M + I + F+ L C + +A + +L P +++D
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD---ELAPMGVILDA 573
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 135/274 (49%), Gaps = 11/274 (4%)
Query: 95 ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
E + V + N ++ + K G++ E V +M + G++P + +Y LM+G VD A
Sbjct: 182 EFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA 241
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
++F++M + PD+ +YN +I+GYCK + +AM DM T+ + +TY +
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLI---PEP 270
M +G + P +++++ LC E L++ +F ++I +P
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPP-HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
NV Y +LI GY K+G V++A+ + M D T+ +++N CK + ++A+ +
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 331 KNNR------DLCPFKILMDGLRKNGMEEVAQRV 358
R + + L+DGL K G + A+R+
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 8/245 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+ G KS +AI+ L + + KP++V Y+ V++GLCK+G V +A
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCS-----FNIIMDALCKQGL 115
G+ + + +SSLI G A + E L E S C+ +N ++DA K
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 116 LLEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ EA A+ M + G V +YTIL+ G + + ++A KL+DMMI+ G+ P +
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
L G C +V A + +++ ++ +A + + + LC+ GR+ +A + R
Sbjct: 543 ALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITER 601
Query: 235 GHRPP 239
G P
Sbjct: 602 GREVP 606
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 12/172 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ K + AI + +E + + Y ++ G+ K+ +A KL M
Sbjct: 470 YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMM 529
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDA--------LCKQ 113
I +GI P F +L G C + + +L+E + +I+DA LCK
Sbjct: 530 IDKGITPTAACFRALSTGLCLSGKVARACKILDE----LAPMGVILDAACEDMINTLCKA 585
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
G + EA + + +RG + T++++ K D A KL I G
Sbjct: 586 GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 182/394 (46%), Gaps = 56/394 (14%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ PN + +N VI LCK V++A ++ M +R PD T+ +L+ G C ++ E
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 91 LLLNENSLDVCS-----FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
LLL+E + CS +N+++D LCK+G L + M +G P+ ++Y L+ G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
CLK K+DKA L + M+ + +P+ +Y LI G K R +A+ L M + N
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFN 264
Y L GL + G+ +A + +M +G + P++ Y+++++ LC E ++A +I N
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK-PNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 265 SLIPE---PNVQS-----------------------------------YNILISGYCKNG 286
+I PN + Y++LI G C G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY---------KNNRDLC 337
RV EAM ++ M I D+ + +I C D A+ LY K+ D+
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 338 PFKILMDGL--RKNGMEEVAQRVSQLYGACDPDV 369
+ IL+DGL +K+ V S L CDPDV
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 180/339 (53%), Gaps = 15/339 (4%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+ GLCK KG + L + L+ PN V YNT+IHGLC G ++KA L
Sbjct: 259 IYNVLIDGLCK-KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKE-VRLLLNENS----LDVCSFNIIMDALCKQGL 115
M+ P+ VT+ +LI G + + VRLL + L+ +++++ L K+G
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
EA ++ +M ++G +P+++ Y++L+DG C + K ++A+++ + MI +G +P+ ++Y+
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L++G+ K +EA+ + ++M N Y L DGLC GR+ +A ++M G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 236 HRPPDLTPYNIILETLCE-QHLDKANKIFNSLI------PEPNVQSYNILISGYCKNGRV 288
+ PD Y+ I++ LC +D A K+++ ++ +P+V +YNIL+ G C +
Sbjct: 498 IK-PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFC-KRKQCDKA 326
A+ + +M R D T +N K CDK
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKG 595
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 65/281 (23%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+SGL K +G +L A + KPN+V+Y+ ++ GLC++G N+A+++ +
Sbjct: 364 IYSVLISGLFK-EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCS-----FNIIMDALCKQGL 115
MI G P+ T+SSL+ GF +E + E CS +++++D LC G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 116 LLEAHAVCYEMIKRGV--------------------------------------QPDVIS 137
+ EA V +M+ G+ QPDV++
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI---------------------L 176
Y IL+DG C++ + +A L + M++ G PDV + N L
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
+ K +RV A + E ML K L P T+ + +C+
Sbjct: 603 VVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 30/221 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +LM G K+ A+Q +E++ + N Y+ +I GLC G V +A + S+M
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR-NKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE--------NSLDVCSFNIIMDALCKQ 113
+ GI PD V +SS+I G C L +E + DV ++NI++D LC Q
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC---------------------KVD 152
+ A + M+ RG PDVI+ ++ K +V
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS 613
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLC 193
A + ++M+ L P ++ ++++ CK ++++ A++ C
Sbjct: 614 GACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKC 654
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 172/359 (47%), Gaps = 15/359 (4%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y + LC+ A + + EL V PNL Y+ +I G CK G V +A L E
Sbjct: 236 IYTIYILDLCRDNKMEEA-EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
++ + P+VV F +L+ GFC A + R L ++ +N ++ CK G
Sbjct: 295 ILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGN 354
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+LEA + EM + PDV +YTIL++G C++ +V +A +LF M + P +YN
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI GYCK +++A++LC +M + PN +T+ L DG C + A M +G
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P +T +I E ++ +A ++++ ++ PN ++ L+ G+ K GR+ A+
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDG 345
YQ + + F LI C+ +A + + R D+C + ++ G
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 168/362 (46%), Gaps = 46/362 (12%)
Query: 12 SKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVV 71
S+ S + + LE +Q K ++ +++ +I + GL +A + EM PD
Sbjct: 109 SEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSK 165
Query: 72 TFSSLIYGFCHADQ----WKEVRLLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEM 126
S++ G + W + +L+++ + DV + ++ KQGL + + EM
Sbjct: 166 ACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM 225
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
G++P+V YTI + C K+++A K+F++M + G++P++++Y+ +I GYCK V
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP-------- 238
+A L +++L L+PN V + L DG C+ L A + M G P
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL 345
Query: 239 --------------------------PDLTPYNIILETLC-EQHLDKANKIFNSLIPE-- 269
PD+ Y I++ LC E + +AN++F + E
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 270 -PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
P+ +YN LI GYCK +++A+ + M + + TF LI+ +C + A+
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 329 LY 330
LY
Sbjct: 466 LY 467
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 41/243 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++GLC A + Q+++ + + P+ YN++IHG CK+ + +A LCSEM
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKN-ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
G+ P+++TFS+LI G+C+ K L E ++ DV ++ ++DA K+ +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 117 LEAHAVCYEMIKRGVQPD-----------------------------------VISYTIL 141
EA + +M++ G+ P+ + +T L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
++G C + +A + F M G+ PD+ SY +++G+ + +R+ + M L DM+ +
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 202 VPN 204
+PN
Sbjct: 616 LPN 618
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL+ G C + A+ E+ ++ + P++V Y +I K+ + +A +L S+M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEM-TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRL-----LLNENS-----LDVCSFNIIMDALC 111
++ GI P+ TF+ L+ GF WKE RL EN+ + F +++ LC
Sbjct: 506 LEAGIHPNDHTFACLVDGF-----WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
+ G +L A +M G+ PD+ SY ++ G+ + ++ L MI+ G++P++
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Query: 172 SYNILIQGY 180
+L + Y
Sbjct: 621 VNQLLARFY 629
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 20/371 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T+++GLCK A + E+ L P+ Y +++ CK G V + +K+ S+M
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGL-SPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGLL 116
R + PD+V FSS++ F + + + N E L D + I++ C++G++
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + EM+++G DV++Y ++ G C + + +A KLF+ M E L PD ++ IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK+ + AM L + M K + + VTY L DG + G + A M +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
P ++ Y+I++ LC + HL +A ++++ +I + P V N +I GYC++G +
Sbjct: 547 LPTPIS-YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR--------DLCPFKILMD 344
S + M V D ++ LI F + + KA L K D+ + ++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 345 GL-RKNGMEEV 354
G R+N M+E
Sbjct: 666 GFCRQNQMKEA 676
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 174/340 (51%), Gaps = 13/340 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++MS +S A+ ++ L+ P+ VIY +I G C+ G+++ A L +EM
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+Q+G DVVT++++++G C E L NE + D + I++D CK G L
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + +M ++ ++ DV++Y L+DG+ +D A++++ M+ ++P SY+IL
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ C + EA + ++M++KN+ P + + G CR G D +FL +M G
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE-----PNVQSYNILISGYCKNGRVDE 290
PD YN ++ E+++ KA + + E P+V +YN ++ G+C+ ++ E
Sbjct: 617 -VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
A + + M R + D T+ +IN F + +A ++
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 173/343 (50%), Gaps = 16/343 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V N+ N +++ LCKDG + K S++ ++G++PD+VT+++LI + +E
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
L+N S V ++N +++ LCK G A V EM++ G+ PD +Y L+
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C K V + K+F M +VPD+ ++ ++ + + +D+A+ + L+P+
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFN 264
V Y L G CR G + A N M +G D+ YN IL LC++ L +A+K+FN
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGC-AMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 265 SLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+ P+ + ILI G+CK G + AM ++Q M + I D T+ L++ F K
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 322 QCDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRV 358
D A ++ + ++++ P + IL++ L G A RV
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 170/335 (50%), Gaps = 11/335 (3%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+++ LCK G + T + V P++V YNT+I GL+ +A +L + M +
Sbjct: 241 MVNALCKD-GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLLLEA 119
G P V T++++I G C +++ + + E S D ++ ++ CK+G ++E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
V +M R V PD++ ++ +M + +DKA F+ + EAGL+PD Y ILIQG
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
YC+ + AMNL +ML + + VTY + GLC+ L +A M R P
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 240 DLTPYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIY 295
T I+++ C+ +L A ++F + + +V +YN L+ G+ K G +D A I+
Sbjct: 480 SYT-LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+M + I+ ++ +L+NA C + +A ++
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 45/310 (14%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+ G C+ KG + L+ Q ++V YNT++HGLCK ++ +A KL +E
Sbjct: 412 IYTILIQGYCR-KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMD------- 108
M +R +FPD T + LI G C + L + LDV ++N ++D
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 109 ----------------------------ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
ALC +G L EA V EMI + ++P V+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK- 199
++ GYC + MI G VPD SYN LI G+ + E + +A L + M +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 200 -NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLD 257
LVP+ TY + G CR ++ +A L +M RG PD + Y ++ Q +L
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN-PDRSTYTCMINGFVSQDNLT 709
Query: 258 KANKIFNSLI 267
+A +I + ++
Sbjct: 710 EAFRIHDEML 719
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 124/245 (50%), Gaps = 12/245 (4%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ G CK NA++ Q+++ + ++ ++V YNT++ G K G ++ A+++ ++M+ +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKE-KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-------NSLDVCSFNIIMDALCKQGLLL 117
I P +++S L+ C E + +E ++ +C N ++ C+ G
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC--NSMIKGYCRSGNAS 602
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE--AGLVPDVWSYNI 175
+ + +MI G PD ISY L+ G+ + + KA L M E GLVPDV++YN
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ G+C+ ++ EA + M+ + + P+ TY + +G L +A+ M RG
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 236 HRPPD 240
P D
Sbjct: 723 FSPDD 727
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 94/175 (53%), Gaps = 8/175 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++ LC A + E+ + + +KP ++I N++I G C+ G + + +M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENS---LDVCSFNIIMDALCKQG 114
I G PD +++++LIYGF + + V+ + E DV ++N I+ C+Q
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
+ EA V +MI+RGV PD +YT +++G+ + + +A ++ D M++ G PD
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 138/242 (57%), Gaps = 7/242 (2%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+K ++VI ++ LCKDG AQ L +EM ++GIFP+V+T++ +I FCH+ +W +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 91 LLL-----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
LL + + D+ +F+ +++A K+ + EA + EM++ + P I+Y ++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + +VD A+++ D M G PDV +++ LI GYCK +RVD M + +M + +V N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFN 264
VTY L G C+ G L A + L M G PD ++ +L LC ++ L KA I
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCG-VAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 265 SL 266
L
Sbjct: 245 DL 246
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
DV I+D LCK G + A + EM ++G+ P+V++Y ++D +C + A +L
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
MIE + PD+ +++ LI + K +V EA + ++ML ++ P +TY + DG C+
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQS 274
R+ DA L M +G PD+ ++ ++ C+ + +D +IF + N +
Sbjct: 129 DRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
Y LI G+C+ G +D A + M + D TF ++ C +K+ KA A+ ++
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 5/205 (2%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M + ++ DV+ T ++D C A+ LF M E G+ P+V +YN +I +C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
+A L M+ K + P+ VT+ L + + ++ +A M R P YN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM-LRWSIFPTTITYN 119
Query: 246 IILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+++ C+Q +D A ++ +S+ + P+V +++ LI+GYCK RVD M I+ M R
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 302 NIVRDSETFKLLINAFCKRKQCDKA 326
IV ++ T+ LI+ FC+ D A
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAA 204
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 161 MIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR 220
M ++ + DV ++ CK A NL +M K + PN +TY + D C GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 221 LPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNI 277
DA L M + P +T +I + E+ + +A +I+ ++ P +YN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+I G+CK RVD+A + +M + D TF LIN +CK K+ D + ++
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL++G CK+K N ++ E+ +V N V Y T+IHG C+ G ++ AQ L +EM
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIV-ANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE 95
I G+ PD +TF ++ G C + ++ +L +
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 40/182 (21%)
Query: 196 MLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH 255
M ++ + V + D LC+ G +A N T MH +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKG-------------------- 40
Query: 256 LDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
IF PNV +YN +I +C +GR +A + ++M + I D TF LIN
Sbjct: 41 ------IF------PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 316 AFCKRKQCDKAIALYKN--NRDLCPFKI----LMDGLRKNGMEEVAQRV--SQLYGACDP 367
AF K ++ +A +YK + P I ++DG K + A+R+ S C P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 368 DV 369
DV
Sbjct: 149 DV 150
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 188/384 (48%), Gaps = 43/384 (11%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLC-SEMIQRGIFPDVVTFSSL 76
A +TL + +V P+ ++N++IH +GLV+ L S+MI G+ PDV + L
Sbjct: 77 AARTLSAMCTFGVV-PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVL 135
Query: 77 IYGFCHADQWK-EVRLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPD 134
I+ FC + + LL N S+D ++N ++ LC+ GL EA+ EM+K G+ PD
Sbjct: 136 IHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195
Query: 135 VISYTILMDGYCLKCKVDKARKLFDM----------------------------MIEAGL 166
+SY L+DG+C +A+ L D M+ +G
Sbjct: 196 TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
PDV +++ +I CK +V E L +M ++ PN VTY L D L + A
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGY 282
++M RG P DL Y ++++ L + L +A K F L+ + PNV +Y L+ G
Sbjct: 316 LYSQMVVRG-IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD--LCP-- 338
CK G + A I M ++++ + T+ +IN + K+ ++A++L + D + P
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434
Query: 339 --FKILMDGLRKNGMEEVAQRVSQ 360
+ ++DGL K G EE+A +S+
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSK 458
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 169/363 (46%), Gaps = 69/363 (19%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ CK AI L+ +++ + V YNTVI GLC+ GL ++A + SEM++
Sbjct: 135 LIHSFCKVGRLSFAISLLRN----RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 190
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-------------------------- 98
GI PD V++++LI GFC + + L++E S
Sbjct: 191 GILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDM 250
Query: 99 -------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
DV +F+ I++ LCK G +LE + EM + V P+ ++YT L+D
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY 310
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
A L+ M+ G+ D+ Y +L+ G K + EA + +L N VPN VTY L
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPN 271
DGLC+ G L A E + Q L+K S+I PN
Sbjct: 371 VDGLCKAGDLSSA------------------------EFIITQMLEK------SVI--PN 398
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
V +Y+ +I+GY K G ++EA+S+ + M +N+V + T+ +I+ K + + AI L K
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 332 NNR 334
R
Sbjct: 459 EMR 461
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 169/355 (47%), Gaps = 39/355 (10%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE- 60
Y T++SGLC+ + A Q L E+ + ++ P+ V YNT+I G CK G +A+ L E
Sbjct: 164 YNTVISGLCEHGLADEAYQFLSEMVKMGIL-PDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 61 ---------------------------MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
M+ G PDVVTFSS+I C + E LLL
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 94 NE-NSLDV----CSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
E + V ++ ++D+L K + A A+ +M+ RG+ D++ YT+LMDG
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+ +A K F M++E VP+V +Y L+ G CK + A + ML K+++PN VTY
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC----EQHLDKANKIFN 264
+ +G + G L +A + L +M + P T Y +++ L E+ + +K
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT-YGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 265 SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ E N + L++ + GR+ E + ++M + + D + LI+ F K
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGF---CHADQWK 87
+K + +YNT+I LCK G+ KA + +M RG PD VTF+SL++G+ H +
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733
Query: 88 EVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
++ E + +V ++N I+ L GL+ E EM RG++PD +Y L+ G
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ + ++ MI GLVP +YN+LI + + ++ +A L ++M + + PN
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 206 VTYKYLFDGLCRFGRLPDA-WN 226
TY + GLC+ PD WN
Sbjct: 854 STYCTMISGLCKLCTHPDVEWN 875
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 37/294 (12%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI---YGFCHADQ-W 86
+KP+L+ N V+ LC++G + +A + ++M+ I P++ T+ + AD +
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 87 KEVRLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
K LL+ L +N ++ LCK G+ +A V +M RG PD +++ LM GY
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ V KA + +M+EAG+ P+V +YN +I+G + E +M ++ + P+
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
TY L G + G + + +T Y CE I +
Sbjct: 784 FTYNALISGQAKIGNMKGS----------------MTIY-------CEM-------IADG 813
Query: 266 LIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
L+P+ +YN+LIS + G++ +A + + M R + ++ T+ +I+ CK
Sbjct: 814 LVPK--TSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 161/372 (43%), Gaps = 45/372 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT++ GL K+ AI+ +E+ + V+ N I + +++ L + G + + + L +M
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIG-VEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLL---LNENSL--DVCSFNIIMDALCKQGLL 116
+ +G+ D + ++SLI F + + E + DV S+N+++ + K G +
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A M ++G++PD+ ++ I+M+ + + KL+D M G+ P + S NI+
Sbjct: 556 -GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIV 614
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD----------------------- 213
+ C+ +++EA+++ M+ + PN TY+ D
Sbjct: 615 VGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGI 674
Query: 214 ------------GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
LC+ G A + M RG P +T +++ H+ KA
Sbjct: 675 KLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALS 734
Query: 262 IFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
++ ++ PNV +YN +I G G + E M R + D T+ LI+
Sbjct: 735 TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQA 794
Query: 319 KRKQCDKAIALY 330
K ++ +Y
Sbjct: 795 KIGNMKGSMTIY 806
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 17/318 (5%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYG-FCHADQ------W 86
++V YN +I G+ K G V A M ++GI PD+ TF+ ++ D W
Sbjct: 538 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 87 KEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+++ + SL C NI++ LC+ G + EA + +M+ + P++ +Y I +D
Sbjct: 597 DKMKSCGIKPSLMSC--NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ D K + ++ G+ YN LI CK+ +A + DM + +P+ V
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE----QHLDKANKI 262
T+ L G + A + + M G P++ YN I+ L + + +DK
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAG-ISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 263 FNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
S P+ +YN LISG K G + +M+IY M +V + T+ +LI+ F +
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 323 CDKAIALYK--NNRDLCP 338
+A L K R + P
Sbjct: 834 MLQARELLKEMGKRGVSP 851
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 100 VCSFNIIMDA-----LCKQ----GLLLEAHAVCY-EMIKRGVQPDVISYTILMDGYCLKC 149
+C+F ++ D+ L Q GL+ + ++ Y +MI GV PDV + +L+ +C
Sbjct: 84 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC--- 140
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
KV + ++ + D +YN +I G C+ DEA +M+ ++P+ V+Y
Sbjct: 141 KVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYN 200
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP 268
L DG C+ G A + + +L + I+L + H +++A +
Sbjct: 201 TLIDGFCKVGNFVRAKALVDEIS-----ELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 269 EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
+P+V +++ +I+ CK G+V E + + M ++ + T+ L+++ K A+A
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 329 LYKN------NRDLCPFKILMDGLRKNGMEEVAQRVSQL 361
LY DL + +LMDGL K G A++ ++
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 179/376 (47%), Gaps = 42/376 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQEL--------------------------EALQLV---- 31
Y TL+ G CK+ + NA + L+E+ AL+ V
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 32 ----KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK 87
P + T+I GLCK G +KA +L + + +G D T ++L++G C A +
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 88 EV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
E +L +D S+N ++ C + L EA EM+KRG++PD +Y+IL+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
G KV++A + +D G++PDV++Y+++I G CK ER +E ++M++KN+
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
PN V Y +L CR GRL A M ++G P T ++I +++A +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 263 FNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
F + EPNV Y LI GY K G++ + + + M +N+ + T+ ++I + +
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 320 RKQCDKAIALYKNNRD 335
+A L R+
Sbjct: 763 DGNVTEASRLLNEMRE 778
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 185/398 (46%), Gaps = 50/398 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GL ++K G+A L+E+ + PN+++YN +I + G +NKA ++ M
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ +G+ T+++LI G+C Q LL E +++ SF ++ LC +
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A EM+ R + P T L+ G C K KA +L+ + G V D + N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G C+ ++DEA + +++L + V + V+Y L G C +L +A+ FL M RG
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 237 RP----------------------------------PDLTPYNIILETLCE-QHLDKANK 261
+P PD+ Y+++++ C+ + ++ +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 262 IFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
F+ ++ +PN YN LI YC++GR+ A+ + ++M + I +S T+ LI
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 319 KRKQCDKAIALYKNNR------DLCPFKILMDGLRKNG 350
+ ++A L++ R ++ + L+DG K G
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 174/376 (46%), Gaps = 51/376 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V P++ ++ T I+ CK G V +A KL S+M + G+ P+VVTF+++I G ++ E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 91 LL---LNENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ + E ++ + +++I++ L + + +A+ V EM K+G P+VI Y L+D +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK------IERV------------- 186
++KA ++ D+M+ GL +YN LI+GYCK ER+
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 187 ----------------DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
D A+ +ML +N+ P L GLC+ G+ A +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQ---SYNILISGYCKNG 286
+G D N +L LCE LD+A +I ++ V SYN LISG C
Sbjct: 496 FLNKGF-VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFK 340
++DEA M R + D+ T+ +LI + ++AI + + + D+ +
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 341 ILMDGLRKNGMEEVAQ 356
+++DG K E Q
Sbjct: 615 VMIDGCCKAERTEEGQ 630
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 147/297 (49%), Gaps = 9/297 (3%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
L+ GLC++ A + +E+ V + V YNT+I G C +++A EM++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE---NSL--DVCSFNIIMDALCKQGLLLE 118
RG+ PD T+S LI G + ++ +E ++ N + DV ++++++D CK E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
EM+ + VQP+ + Y L+ YC ++ A +L + M G+ P+ +Y LI+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G I RV+EA L E+M + L PN Y L DG + G++ L MH + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
+T +I + ++ +A+++ N + + P+ +Y I GY K G V EA
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 16/264 (6%)
Query: 104 NIIMDALCKQGLLLEAHAVC--YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
NI++ +L + E C ++++ +GV PDV +T ++ +C KV++A KLF M
Sbjct: 230 NILLTSLVRAN---EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
EAG+ P+V ++N +I G R DEA E M+ + + P +TY L GL R R+
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNI 277
DA+ L M +G PP++ YN ++++ E L+KA +I + ++ + +YN
Sbjct: 347 GDAYFVLKEMTKKGF-PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN--RD 335
LI GYCKNG+ D A + + M + +F +I C D A+ R+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 336 LCP----FKILMDGLRKNGMEEVA 355
+ P L+ GL K+G A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKA 489
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+SG C K A L E+ L KP+ Y+ +I GL V +A + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ G+ PDV T+S +I G C A++ +E + +E + +N ++ A C+ G L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + +M +G+ P+ +YT L+ G + +V++A+ LF+ M GL P+V+ Y L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GY K+ ++ + L +M +KN+ PN +TY + G R G + +A L M +G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 237 RPPDLT 242
P +T
Sbjct: 782 VPDSIT 787
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 146/309 (47%), Gaps = 13/309 (4%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCS--EMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
P+ N ++ L + N+ QK C +++ +G+ PDV F++ I FC + +E
Sbjct: 224 PSKTTCNILLTSLVR---ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
L ++ + +V +FN ++D L G EA +M++RG++P +I+Y+IL+ G
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
++ A + M + G P+V YN LI + + +++A+ + + M++K L +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
TY L G C+ G+ +A L M G + ++I D A +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 266 LI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
++ P LISG CK+G+ +A+ ++ + V D+ T L++ C+ +
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 323 CDKAIALYK 331
D+A + K
Sbjct: 521 LDEAFRIQK 529
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ +G+FP T + L+ A+++++ ++ S DV F ++A CK G +
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + +M + GV P+V+++ ++DG + + D+A + M+E G+ P + +Y+IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
++G + +R+ +A + ++M K PN + Y L D G L A M +G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
T YN +++ C+ D A ++ ++ N S+ +I C + D A+
Sbjct: 397 SLTSST-YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
M LRN+ LI+ CK + KA+ L+
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 179/376 (47%), Gaps = 42/376 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQEL--------------------------EALQLV---- 31
Y TL+ G CK+ + NA + L+E+ AL+ V
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 32 ----KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK 87
P + T+I GLCK G +KA +L + + +G D T ++L++G C A +
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 88 EV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
E +L +D S+N ++ C + L EA EM+KRG++PD +Y+IL+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
G KV++A + +D G++PDV++Y+++I G CK ER +E ++M++KN+
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
PN V Y +L CR GRL A M ++G P T ++I +++A +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 263 FNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
F + EPNV Y LI GY K G++ + + + M +N+ + T+ ++I + +
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 320 RKQCDKAIALYKNNRD 335
+A L R+
Sbjct: 763 DGNVTEASRLLNEMRE 778
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 185/398 (46%), Gaps = 50/398 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GL ++K G+A L+E+ + PN+++YN +I + G +NKA ++ M
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ +G+ T+++LI G+C Q LL E +++ SF ++ LC +
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A EM+ R + P T L+ G C K KA +L+ + G V D + N L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G C+ ++DEA + +++L + V + V+Y L G C +L +A+ FL M RG
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 237 RP----------------------------------PDLTPYNIILETLCE-QHLDKANK 261
+P PD+ Y+++++ C+ + ++ +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 262 IFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
F+ ++ +PN YN LI YC++GR+ A+ + ++M + I +S T+ LI
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 319 KRKQCDKAIALYKNNR------DLCPFKILMDGLRKNG 350
+ ++A L++ R ++ + L+DG K G
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 174/376 (46%), Gaps = 51/376 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V P++ ++ T I+ CK G V +A KL S+M + G+ P+VVTF+++I G ++ E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 91 LL---LNENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ + E ++ + +++I++ L + + +A+ V EM K+G P+VI Y L+D +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK------IERV------------- 186
++KA ++ D+M+ GL +YN LI+GYCK ER+
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 187 ----------------DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
D A+ +ML +N+ P L GLC+ G+ A +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQ---SYNILISGYCKNG 286
+G D N +L LCE LD+A +I ++ V SYN LISG C
Sbjct: 496 FLNKGF-VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFK 340
++DEA M R + D+ T+ +LI + ++AI + + + D+ +
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 341 ILMDGLRKNGMEEVAQ 356
+++DG K E Q
Sbjct: 615 VMIDGCCKAERTEEGQ 630
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 147/297 (49%), Gaps = 9/297 (3%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
L+ GLC++ A + +E+ V + V YNT+I G C +++A EM++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVM-DRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE---NSL--DVCSFNIIMDALCKQGLLLE 118
RG+ PD T+S LI G + ++ +E ++ N + DV ++++++D CK E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
EM+ + VQP+ + Y L+ YC ++ A +L + M G+ P+ +Y LI+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G I RV+EA L E+M + L PN Y L DG + G++ L MH + P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
+T +I + ++ +A+++ N + + P+ +Y I GY K G V EA
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 16/264 (6%)
Query: 104 NIIMDALCKQGLLLEAHAVC--YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
NI++ +L + E C ++++ +GV PDV +T ++ +C KV++A KLF M
Sbjct: 230 NILLTSLVRAN---EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
EAG+ P+V ++N +I G R DEA E M+ + + P +TY L GL R R+
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP---NVQSYNI 277
DA+ L M +G PP++ YN ++++ E L+KA +I + ++ + +YN
Sbjct: 347 GDAYFVLKEMTKKGF-PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN--RD 335
LI GYCKNG+ D A + + M + +F +I C D A+ R+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 336 LCP----FKILMDGLRKNGMEEVA 355
+ P L+ GL K+G A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKA 489
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+SG C K A L E+ L KP+ Y+ +I GL V +A + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGL-KPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ G+ PDV T+S +I G C A++ +E + +E + +N ++ A C+ G L
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + +M +G+ P+ +YT L+ G + +V++A+ LF+ M GL P+V+ Y L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I GY K+ ++ + L +M +KN+ PN +TY + G R G + +A L M +G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 237 RPPDLT 242
P +T
Sbjct: 782 VPDSIT 787
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 146/309 (47%), Gaps = 13/309 (4%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCS--EMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
P+ N ++ L + N+ QK C +++ +G+ PDV F++ I FC + +E
Sbjct: 224 PSKTTCNILLTSLVR---ANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
L ++ + +V +FN ++D L G EA +M++RG++P +I+Y+IL+ G
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
++ A + M + G P+V YN LI + + +++A+ + + M++K L +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
TY L G C+ G+ +A L M G + ++I D A +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 266 LI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
++ P LISG CK+G+ +A+ ++ + V D+ T L++ C+ +
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 323 CDKAIALYK 331
D+A + K
Sbjct: 521 LDEAFRIQK 529
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ +G+FP T + L+ A+++++ ++ S DV F ++A CK G +
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + +M + GV P+V+++ ++DG + + D+A + M+E G+ P + +Y+IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
++G + +R+ +A + ++M K PN + Y L D G L A M +G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
T YN +++ C+ D A ++ ++ N S+ +I C + D A+
Sbjct: 397 SLTSST-YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
M LRN+ LI+ CK + KA+ L+
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 180/375 (48%), Gaps = 46/375 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ G CK + +++ + P++VIY ++ GL K GL+ A + +M
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGY-PPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+ + I +VV F+SLI G+C +++ E + + DV +F +M +G L
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYC------------------------------ 146
EA + + M K G++PD ++Y L+D +C
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 147 ----LKC-KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
KC +++ A K F+ +IE + PD+ +YN +I GYC + R+DEA + E +
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKAN 260
PN VT L LC+ + A + M +G +P +T Y +++ + ++ +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT-YGCLMDWFSKSVDIEGSF 726
Query: 261 KIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
K+F + + P++ SY+I+I G CK GRVDEA +I+ ++ D + +LI +
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 318 CKRKQCDKAIALYKN 332
CK + +A LY++
Sbjct: 787 CKVGRLVEAALLYEH 801
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 160/307 (52%), Gaps = 10/307 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN+V + T+I+G CK G +++A L M QRGI PD++ +S+LI G+ A L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 93 LNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
++ LDV F+ +D K G L A V M+ +G+ P+V++YTIL+ G C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++ +A ++ +++ G+ P + +Y+ LI G+CK + L EDM+ P+ V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
Y L DGL + G + A F +M + R ++ +N +++ C D+A K+F +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIR-LNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 267 ---IPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+P+V ++ ++ GR++EA+ ++ M + D+ + LI+AFCK +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582
Query: 324 DKAIALY 330
+ L+
Sbjct: 583 TIGLQLF 589
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 9/337 (2%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
TL++G CK A + +E + ++P+L+ Y+T+I G K G++ KL S+ +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQ-RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLE 118
+G+ DVV FSS I + + R+L S +V ++ I++ LC+ G + E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + +++KRG++P +++Y+ L+DG+C + L++ MI+ G PDV Y +L+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G K + AM ML +++ N V + L DG CR R +A M G +P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIY 295
T ++ ++ E L++A +F + EP+ +Y LI +CK+ + + ++
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
M I D ++I+ K + + A + N
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 124/245 (50%), Gaps = 6/245 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ CK +Q L +L + ++ + N VIH L K + A K + +
Sbjct: 569 YCTLIDAFCKHMKPTIGLQ-LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Query: 62 IQRGIFPDVVTFSSLIYGFC---HADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLL 116
I+ + PD+VT++++I G+C D+ + + LL + + I++ LCK +
Sbjct: 628 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 687
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + M ++G +P+ ++Y LMD + ++ + KLF+ M E G+ P + SY+I+
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK RVDEA N+ + L+P+ V Y L G C+ GRL +A M G
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 237 RPPDL 241
+P DL
Sbjct: 808 KPDDL 812
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 51/337 (15%)
Query: 43 HGLCKDGL-----VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN--- 94
HG D L V KA +++RG +V+ + ++ G DQ + LL+
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278
Query: 95 --ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+ +V +F +++ CK+G + A + M +RG++PD+I+Y+ L+DGY +
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 153 KARKLFDM-----------------------------------MIEAGLVPDVWSYNILI 177
KLF M+ G+ P+V +Y ILI
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+G C+ R+ EA + +L + + P+ VTY L DG C+ G L + M G+
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY- 457
Query: 238 PPDLTPYNIILETLCEQHLD-KANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMS 293
PPD+ Y ++++ L +Q L A + ++ + NV +N LI G+C+ R DEA+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+++ M + I D TF ++ + ++A+ L+
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 21/236 (8%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIK--------------RGVQPDVISYTILMDGYCL 147
SF I L + G+ A V EMI R + DV + LM+ C
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKF--LMECCCR 158
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
VDKA ++F + G+V S ++ +RVD + + + + P+ V+
Sbjct: 159 YGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 208 -YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
+ ++ D L G + A +F + RG R + N +L+ L ++ A+++ + +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFR-VGIVSCNKVLKGLSVDQIEVASRLLSLV 277
Query: 267 I---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ P PNV ++ LI+G+CK G +D A +++ M R I D + LI+ + K
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 177/372 (47%), Gaps = 17/372 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGL-VNKAQKLCSE 60
+ L+S +S AI ++ L +PNLV YN VI K G+ + K E
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGL-RPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGL 115
M + G+ PD +TF+SL+ W+ R L +E + DV S+N ++DA+CK G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ A + +M + + P+V+SY+ ++DG+ + D+A LF M G+ D SYN
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ Y K+ R +EA+++ +M + + + VTY L G + G+ + T M R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK-RE 508
Query: 236 HRPPDLTPYNIILETLCEQHLDKAN----KIFNSLIPEPNVQSYNILISGYCKNGRVDEA 291
H P+L Y+ +++ + L K + F S +V Y+ LI CKNG V A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGM 351
+S+ M I + T+ +I+AF + D++ A Y N L + L
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS-ADYSNGGSLPFSSSALSAL----T 623
Query: 352 EEVAQRVSQLYG 363
E RV QL+G
Sbjct: 624 ETEGNRVIQLFG 635
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
KV A+++F+ G V++++ LI Y + +EA+++ M L PN VTY
Sbjct: 248 KVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYN 307
Query: 210 YLFDGLCRFG-RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIFNSLI 267
+ D + G F M G +P +T +N +L L + A +F+ +
Sbjct: 308 AVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRIT-FNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 268 P---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
E +V SYN L+ CK G++D A I M ++ I+ + ++ +I+ F K + D
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 325 KAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACD 366
+A+ L+ R L I +D + N + + +V + A D
Sbjct: 427 EALNLFGEMRYLG---IALDRVSYNTLLSIYTKVGRSEEALD 465
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 183/374 (48%), Gaps = 48/374 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG LM GL + G+ + LQ ++ V PN V+YNT++H LCK+G V +A+ L SEM
Sbjct: 185 YGILMKGLSLTNRIGDGFKLLQIMKT-SGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-NSL----DVCSFNIIMDALCKQGLL 116
+ P+ VTF+ LI +C+ + + +LL + SL DV + +M+ LC +G +
Sbjct: 244 KE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRV 299
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V + +G + DV++ L+ GYC K+ A++ F M G +P+V +YN+L
Sbjct: 300 SEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLL 359
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH---- 232
I GYC + +D A++ DM T + N T+ L GL GR D L M
Sbjct: 360 IAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDT 419
Query: 233 ----------------YRGHRPPDLTPYNIILETLCEQHLDKANKI-------------- 262
Y+ +R D + + +E L + +D++ K+
Sbjct: 420 VHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKT 479
Query: 263 -FNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
++ +I E P++ + LI Y ++G+++E++ + +M R + S TF +I FC
Sbjct: 480 AYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFC 539
Query: 319 KRKQCDKAIALYKN 332
K+ + I ++
Sbjct: 540 KQDKVMNGIKFVED 553
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L LC + Q L E+ + P+ I+ T+I G + L+ + + +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 62 IQRGIFPDVVTFSSLIYGFCHAD-----QWKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ GI P + F+S++ D ++ +++ + DV ++ I+M L +
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + M GV P+ + Y L+ C KV +AR L M E P+ ++NIL
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNIL 254
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I YC +++ ++M L E + VP+ VT + + LC GR+ +A L R+ +G
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
+ D+ N +++ C + A + F + + PNV++YN+LI+GYC G +D A+
Sbjct: 315 KV-DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
+ +M I + TF LI + D + + + +D
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 154/347 (44%), Gaps = 56/347 (16%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+M LC A++ L+ +E+ + K ++V NT++ G C G + AQ+ EM ++
Sbjct: 289 VMEVLCNEGRVSEALEVLERVES-KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDV-----CSFNIIMDALCKQGL---- 115
G P+V T++ LI G+C N+ D +FN ++ L G
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Query: 116 --LLE-------AHA--------VCYEMIKRGVQPDVISYTILMD--------------G 144
+LE H V Y K D + + + M+
Sbjct: 408 LKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLIS 467
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
C K +D + +D MI G VP + + LI Y + +++E++ L DM+T+ +P
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPR 527
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIF 263
+ T+ + G C+ ++ + F+ M RG PD YN +LE LC + + KA +F
Sbjct: 528 SSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC-VPDTESYNPLLEELCVKGDIQKAWLLF 586
Query: 264 N-----SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
+ S++P+P++ S + +C + + +I+ N L++I++
Sbjct: 587 SRMVEKSIVPDPSMWSSLM----FC----LSQKTAIHVNSSLQDIIQ 625
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 18/241 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++G C +A+ T +++ ++ N +NT+I GL G + K+ EM
Sbjct: 356 YNLLIAGYCDVGMLDSALDTFNDMKT-DAIRWNFATFNTLIRGLSIGGRTDDGLKIL-EM 413
Query: 62 IQRGIFPDVV------TFSSLIYGFCHADQWKE-VRLLLNENSLDVC----SFNIIMDAL 110
+Q D V ++ +IYGF ++W++ + LL L SF +I +L
Sbjct: 414 MQDS---DTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI--SL 468
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
C++G + + +MI G P +I L+ Y K++++ +L + M+ G +P
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRS 528
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
++N +I G+CK ++V + EDM + VP+ +Y L + LC G + AW +R
Sbjct: 529 STFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSR 588
Query: 231 M 231
M
Sbjct: 589 M 589
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 196/417 (47%), Gaps = 60/417 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +SG ++ +A + ++E+ ++ PN V+ +I+ CK G V +A M
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVL-PNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ +GI D T++ L+ G D+ + + E + DV S+ ++++ K G +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A ++ EM++ G+ P+VI Y +L+ G+C +++KA++L D M GL P+ +Y +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR------------------- 217
I GYCK + EA L ++M K LVP++ Y L DG CR
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 218 ---------------FGRLPDAWNFLTRM----HYRGHRPPDLTPYNIILETLC-EQHLD 257
FG+ L R+ R +P D+T YNI+++ LC E +L+
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT-YNIMIDYLCKEGNLE 822
Query: 258 KANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
A ++F+ + P V +Y L++GY K GR E ++ I D + ++I
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 315 NAFCKRKQCDKAIAL----YKNNR--DLCPFKI-----LMDGLRKNGMEEVAQRVSQ 360
NAF K KA+ L + N D C I L+ G K G EVA++V +
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 204/419 (48%), Gaps = 53/419 (12%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ ++ G+A++ L+E++ Q + P++ YN++I GL K +++A+ E
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQW-------KEVRL------------LLNE-----N 96
M++ G+ P+ T+ + I G+ A ++ KE+R L+NE
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 97 SLDVCS----------------FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
++ CS + ++M+ L K + +A + EM +G+ PDV SY +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
L++G+ + KA +FD M+E GL P+V YN+L+ G+C+ +++A L ++M K
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKA 259
L PNAVTY + DG C+ G L +A+ M +G PD Y +++ C +++A
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERA 751
Query: 260 NKIF--NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR----DSETFKLL 313
IF N + +N LI+ K G+ + + + + R + T+ ++
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 314 INAFCKRKQCDKAIALYK--NNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACDPDVA 370
I+ CK + A L+ N +L P I L NG +++ +R ++++ D +A
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL-NGYDKMGRR-AEMFPVFDEAIA 868
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 179/372 (48%), Gaps = 17/372 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQL-VKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
Y L+ GL K + + A + E+ + + +KP + Y+ I + K+G++ KA+ L
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDG 372
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGL 115
MI G+ P ++SLI G+C ++ LL E + ++ ++ +C G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A+ + EMI G +P+V+ YT L+ + + A ++ M E G+ PD++ YN
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G K +R+DEA + +M+ L PNA TY G A ++ M G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
P + +I E + + +A + S++ + + ++Y +L++G KN +VD+A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP----FKILMDGL 346
I++ M + I D ++ +LIN F K KA +++ L P + +L+ G
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 347 RKNGMEEVAQRV 358
++G E A+ +
Sbjct: 673 CRSGEIEKAKEL 684
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 161/368 (43%), Gaps = 52/368 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y LM+GL K+ +A + +E+ + + P++ Y +I+G K G + KA + EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
++ G+ P+V+ ++ L+ GFC + + ++ + LL+E S+ + ++ I+D CK G L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA---------------------- 154
EA + EM +G+ PD YT L+DG C V++A
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 155 ----------------RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT 198
+L D + P+ +YNI+I CK ++ A L M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK 258
NL+P +TY L +G + GR + + G P + II L E K
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 259 ANKIFNSLIPEP--------NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
A + + + + ++ + L+SG+ K G ++ A + +NM + DS T
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Query: 311 KLLINAFC 318
LIN C
Sbjct: 954 IELINESC 961
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 194/500 (38%), Gaps = 145/500 (29%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++G L G A+ L+LV P L ++ L + ++ +
Sbjct: 153 LFGILFDGYIAKGYIEEAVFVFSSSMGLELV-PRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQ-----------WKEVR---------LLLNENSLDV 100
M++R + DV T+ LI C A KE R L L E+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM--I 269
Query: 101 C--------SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY------- 145
C ++++++D LCK L +A ++ EM GV D +Y++L+DG
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 146 -------------------------CLKCK---VDKARKLFDMMIEAGLVPDVWSYNILI 177
C+ K ++KA+ LFD MI +GL+P +Y LI
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+GYC+ + V + L +M +N+V + TY + G+C G L A+N + M G R
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 238 P----------------------------------PDLTPYNIILETLCE-QHLDKANKI 262
P PD+ YN ++ L + + +D+A
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 263 FNSLIP---EPNVQSYNILISG-----------------------------------YCK 284
++ +PN +Y ISG YCK
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCP 338
G+V EA S Y++M + I+ D++T+ +L+N K + D A +++ R D+
Sbjct: 570 KGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS 629
Query: 339 FKILMDGLRKNGMEEVAQRV 358
+ +L++G K G + A +
Sbjct: 630 YGVLINGFSKLGNMQKASSI 649
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 139/340 (40%), Gaps = 58/340 (17%)
Query: 45 LCKDGLVNKAQKLCSEMIQR-------------------GIFPDVVTFSSLIYGFCHADQ 85
LC G KA + MI+R G D V F L G+
Sbjct: 107 LCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGY 166
Query: 86 WKEVRLLLNEN-------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISY 138
+E + + + L C +++DAL + L V M++R V DV +Y
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRC--KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224
Query: 139 TILMDGYC---------------------LKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
+L+ +C VD A KL + MI GLVP ++Y++LI
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
G CKI+R+++A +L +M + + + TY L DGL + GR DA L +H
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRNADAAKGL--VHEMVSH 341
Query: 238 PPDLTPYNI---ILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
++ PY I E ++KA +F+ +I P Q+Y LI GYC+ V +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ M RNIV T+ ++ C D A + K
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 198/407 (48%), Gaps = 39/407 (9%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKD------GLVNKA 54
++ +L+ C S A + L+++ + P V+YN +I +C D L++ A
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 55 QKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSL-DVCSFNIIMDA 109
+K SEM+ G+ + + SS C A ++++ +R ++ + + D +++ +++
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 110 LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
LC + A + EM + G+ DV +YTI++D +C +++ARK F+ M E G P+
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT 229
V +Y LI Y K ++V A L E ML++ +PN VTY L DG C+ G++ A
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 230 RMHYRGHRP---------------PDLTPYNIILETLCEQH-LDKANKIFNSLIP---EP 270
RM P P++ Y +L+ C+ H +++A K+ +++ EP
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI-AL 329
N Y+ LI G CK G++DEA + M T+ LI+ + K K+ D A L
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 330 YKNNRDLCP-----FKILMDGLRKNGMEEVAQRVSQLY--GACDPDV 369
K + C + ++DGL K G + A ++ Q+ C P+V
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 176/390 (45%), Gaps = 39/390 (10%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ CK+ A + E+ + PN+V Y +IH K V+ A +L M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCT-PNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL---------------------NENSLDV 100
+ G P++VT+S+LI G C A Q ++ + N +V
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 101 CSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDM 160
++ ++D CK + EA + M G +P+ I Y L+DG C K+D+A+++
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 161 MIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR 220
M E G +++Y+ LI Y K++R D A + ML + PN V Y + DGLC+ G+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 221 LPDAWNFLTRMHYRGHRPPDLTPYNII--------LETLCEQHLDKANKIFNSLIPEPNV 272
+A+ + M +G +P +T +I +ET C + L++ S PN
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET-CLELLER----MGSKGVAPNY 814
Query: 273 QSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+Y +LI CKNG +D A ++ + M + + ++ +I F K +
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 333 NRDLCPF----KILMDGLRKNGMEEVAQRV 358
D PF ++L+D L K E+A R+
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 162/334 (48%), Gaps = 44/334 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG L+ G CKS A + L + +++ +PN ++Y+ +I GLCK G +++AQ++ +EM
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIM-----DALCKQGLL 116
+ G + T+SSLI + + +L++ + C+ N+++ D LCK G
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ + M ++G QP+V++YT ++DG+ + K++ +L + M G+ P+ +Y +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 177 IQGYCKIERVDEAMNLCEDM------------------LTKNLV---------------P 203
I CK +D A NL E+M K + P
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 880
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP-YNIILETLC-EQHLDKANK 261
Y+ L D L + RL A L + D + YN ++E+LC ++ A +
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 262 IFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
+F+ + + P +QS+ LI G +N ++ EA+
Sbjct: 941 LFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 169/425 (39%), Gaps = 65/425 (15%)
Query: 10 CKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD 69
C++ A++ L L+ + +P+ YN +I K ++ A + EM + D
Sbjct: 211 CRNGSFSIALEELGRLKDFRF-RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMI 127
T Y C +W+E L+ + D + ++ LC+ L EA M
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR 329
Query: 128 KRGVQPDVISYTILMDG-----------------------------------YCLKCKVD 152
P+V++Y+ L+ G YC
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYC------KIERVDEAMNLCEDMLTKNLVPNAV 206
A KL M++ G +P YNILI C + +D A +ML +V N +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNS 265
LC G+ A++ + M +G PD + Y+ +L LC ++ A +F
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGF-IPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNM----CLRNIVRDSETFKLLINAFC 318
+ +V +Y I++ +CK G +++A + M C N+V T+ LI+A+
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV----TYTALIHAYL 564
Query: 319 KRKQCDKAIALYKNN------RDLCPFKILMDGLRKNG-MEEVAQRVSQLYGACD-PDVA 370
K K+ A L++ ++ + L+DG K G +E+ Q ++ G+ D PDV
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 371 LVRNQ 375
+ Q
Sbjct: 625 MYFKQ 629
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V PN V Y +I CK+G ++ A L EM Q + +I GF ++ E
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESL 867
Query: 91 LLLNENSLD-----VCSFNIIMDALCKQGLLLEAHAVCYEMIK-RGVQPDVIS-YTILMD 143
LL+E D + + +++D L K L A + E+ D S Y L++
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIE 927
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
CL KV+ A +LF M + G++P++ S+ LI+G + ++ EA+ L
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 976
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 21/346 (6%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
++SGLCK+ A+ +++A L P+LV Y+ VIHGLCK G + A L EM +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGL-SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLLLEA 119
I P+ T +L+ G C E R LL+ +LD+ +NI++D K G + EA
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ +I+ G+ P V ++ L+ GYC + +ARK+ D++ GL P V SY L+
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY----RG 235
Y L +M + + P VTY +F GLCR + + + L + +G
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 236 HR-------PPDLTPYNIILETLCE-QHLDKAN---KIFNSLIPEPNVQSYNILISGYCK 284
R PPD YN I++ LC +HL A +I S + + +YNILI C
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
G + +A S ++ +N+ + LI A C + + A+ L+
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLF 713
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 179/360 (49%), Gaps = 18/360 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ GLC+ + +A+ L+ E + + P++V +N+++ G CK G V+ A+ +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSE-WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLL---LNENSL--DVCSFNIIMDALCKQGLL 116
++ G+ P V + + LI G C E L +N++ + D ++NI+ G++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL-VPDVWSYNI 175
A V +M+ +G+ PDVI+YTIL+ G C +D L M+ G + + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ G CK R+DEA++L M L P+ V Y + GLC+ G+ A M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 236 HRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEA 291
P T + +L LC++ L +A + +SLI ++ YNI+I GY K+G ++EA
Sbjct: 429 ILPNSRT-HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA------IALYKNNRDLCPFKILMDG 345
+ +++ + I TF LI +CK + +A I LY + + LMD
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 179/327 (54%), Gaps = 14/327 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++MSG CK A + LV P++ +N +I+GLC G + +A +L S+M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 62 IQRGIFPDVVTFSSLIYGFCH-----ADQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGL 115
+ G+ PD VT++ L GF H + W+ +R +L++ S DV ++ I++ C+ G
Sbjct: 284 NKHGVEPDSVTYNILAKGF-HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 116 LLEAHAVCYEMIKRGVQPD-VISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ + +M+ RG + + +I ++++ G C ++D+A LF+ M GL PD+ +Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
I+I G CK+ + D A+ L ++M K ++PN+ T+ L GLC+ G L +A + L +
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 235 GHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDE 290
G D+ YNI+++ + +++A ++F +I P+V ++N LI GYCK + E
Sbjct: 463 G-ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAF 317
A I + L + ++ L++A+
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 15/299 (5%)
Query: 72 TFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEM 126
T+S+++ G C + ++ L L + V SFN IM CK G + A + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
+K G+ P V S+ IL++G CL + +A +L M + G+ PD +YNIL +G+ + +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
A + DML K L P+ +TY L G C+ G + L M RG + P ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 247 ILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+L LC+ +D+A +FN + + P++ +Y+I+I G CK G+ D A+ +Y MC +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
I+ +S T L+ C++ +A +L + D+ + I++DG K+G E A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 159/385 (41%), Gaps = 63/385 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNL--VIYNTVIHGLCKDGLVNKAQKLCS 59
+G L+ GLC+ G ++ L++L L V+YN VI G K G + +A +L
Sbjct: 436 HGALLLGLCQK---GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQG 114
+I+ GI P V TF+SLIYG+C E R +L+ L V S+ +MDA G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK------------VDKARKLFDMMI 162
+ EM G+ P ++Y+++ G C K +K ++ M
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
G+ PD +YN +IQ C+++ + A E M ++NL ++ TY L D LC +G +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGY 282
A +F+ L N+ L +Y LI +
Sbjct: 673 KADSFIY----------SLQEQNVSLSKF----------------------AYTTLIKAH 700
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK-------QCDKAIALYKNNRD 335
C G + A+ ++ + R + +IN C+R Q + L N R
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLISNERS 760
Query: 336 LCPFKILMDGLRKN--GMEEVAQRV 358
IL R++ +E+++ V
Sbjct: 761 FVYCPILSANCRRHTLSVEKLSHEV 785
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
VD + + M + L SYN ++ + + +++ + +D N TY
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYST 192
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP- 268
+ DGLCR +L DA FL ++ P + +N I+ C+ +D A F +++
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 269 --EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
P+V S+NILI+G C G + EA+ + +M + DS T+ +L F
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 168/347 (48%), Gaps = 12/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++G CK +A + L + + P+ V YN +I LC G ++ A K+ +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDF-SPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+ P V+T++ LI E L++E D+ ++N I+ +CK+G++
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + + +G +PDVISY IL+ + K ++ KL M P+V +Y+IL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I C+ +++EAMNL + M K L P+A +Y L CR GRL A FL M G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PD+ YN +L TLC+ D+A +IF L PN SYN + S +G A+
Sbjct: 400 L-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
+ M I D T+ +I+ C+ D+A L + R C F
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS-CEF 504
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 177/328 (53%), Gaps = 15/328 (4%)
Query: 15 SGNAIQTLQELEAL--QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVT 72
SGN I++L LE + + P++++ +I G + KA ++ E++++ PDV
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFA 160
Query: 73 FSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMI 127
+++LI GFC ++ + R+ + S D ++NI++ +LC +G L A V +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 128 KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVD 187
QP VI+YTIL++ L+ VD+A KL D M+ GL PD+++YN +I+G CK VD
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 188 EAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
A + ++ K P+ ++Y L L G+ + +T+M + P++ Y+I+
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCDPNVVTYSIL 339
Query: 248 LETLC-EQHLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+ TLC + +++A + L+ E P+ SY+ LI+ +C+ GR+D A+ + M
Sbjct: 340 ITTLCRDGKIEEAMNLL-KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALY 330
+ D + ++ CK + D+A+ ++
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIF 426
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 174/346 (50%), Gaps = 17/346 (4%)
Query: 41 VIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW-KEVR---LLLNEN 96
+ H C+ G ++ L M+++G PDV+ + LI GF K VR +L
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
DV ++N +++ CK + +A V M + PD ++Y I++ C + K+D A K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
+ + ++ P V +Y ILI+ VDEA+ L ++ML++ L P+ TY + G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 217 RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNV 272
+ G + A+ + + +G PD+ YNI+L L Q ++ K+ + E PNV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCE-PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 273 QSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+Y+ILI+ C++G+++EAM++ + M + + D+ ++ LI AFC+ + D AI +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 333 N------RDLCPFKILMDGLRKNGMEEVAQRVSQLYG--ACDPDVA 370
D+ + ++ L KNG + A + G C P+ +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 12/325 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ G+CK A + ++ LE L+ +P+++ YN ++ L G + +KL ++M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLE-LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGLL 116
P+VVT+S LI C + +E LL E L D S++ ++ A C++G L
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A MI G PD+++Y ++ C K D+A ++F + E G P+ SYN +
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
A+++ +M++ + P+ +TY + LCR G + +A+ L M
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 237 RPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P +T YNI+L C+ H ++ A + S++ PN +Y +LI G G EAM
Sbjct: 505 HPSVVT-YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 293 SIYQNMCLRNIVRDSETFKLLINAF 317
+ ++ + + + +FK L F
Sbjct: 564 ELANDLVRIDAISEY-SFKRLHRTF 587
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 196/376 (52%), Gaps = 19/376 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++SGL K + ++ + ++ + K +L Y+++IHGLC G V+KA+ + +E+
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREK-DLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV----RLLLNENSLDVCSFNIIMDALCKQGLLL 117
+R DVVT+++++ GFC + KE R++ ++NS+++ S+NI++ L + G +
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKID 376
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + M +G D +Y I + G C+ V+KA + + +G DV++Y +I
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
CK +R++EA NL ++M + N+ L GL R RL +A FL M G R
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 238 PPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
P + YNI++ LC+ +A+ ++ +P++++Y+IL+ G C++ ++D A+
Sbjct: 497 PT-VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLR 347
++ + D +LI+ C + D A+ + N +L + LM+G
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 348 KNGMEEVAQRVSQLYG 363
K G + R + ++G
Sbjct: 616 KVG---DSNRATVIWG 628
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 17/290 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG + GLC + A+ +QE+E+ ++ Y ++I LCK + +A L EM
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVES-SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC-----SFNIIMDALCKQGLL 116
+ G+ + ++LI G + E L E + C S+NI++ LCK G
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA A EM++ G +PD+ +Y+IL+ G C K+D A +L+ +++GL DV +NIL
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG---RLPDAWNFLTRMHY 233
I G C + ++D+AM + +M +N N VTY L +G + G R W ++ +M
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 234 RGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILI 279
+ PD+ YN I++ LC + + A + F+ P V ++NIL+
Sbjct: 636 Q----PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 53/376 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++ ++K +++L V PNL YN +I CK KA+ M
Sbjct: 117 YNTLLNAFVEAK-QWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+ G PDV ++S++I + L K G L +A
Sbjct: 176 WKEGFKPDVFSYSTVI------------------------------NDLAKAGKLDDALE 205
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE-AGLVPDVWSYNILIQGY 180
+ EM +RGV PDV Y IL+DG+ + A +L+D ++E + + P+V ++NI+I G
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
K RVD+ + + E M + TY L GLC G + A + + R D
Sbjct: 266 SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER-KASID 324
Query: 241 LTPYNIILETLCEQHLDKANKIFNSL----IPEP----NVQSYNILISGYCKNGRVDEAM 292
+ YN +L C + KI SL I E N+ SYNILI G +NG++DEA
Sbjct: 325 VVTYNTMLGGFC-----RCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK------NNRDLCPFKILMDGL 346
I++ M + D T+ + I+ C +KA+ + + + D+ + ++D L
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 347 -RKNGMEEVAQRVSQL 361
+K +EE + V ++
Sbjct: 440 CKKKRLEEASNLVKEM 455
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 19/365 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ CK K A L + + KP++ Y+TVI+ L K G ++ A +L EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWK-EGFKPDVFSYSTVINDLAKAGKLDDALELFDEM 210
Query: 62 IQRGIFPDVVTFSSLIYGFC----HADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGL 115
+RG+ PDV ++ LI GF H + LL ++S+ +V + NI++ L K G
Sbjct: 211 SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGR 270
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ + + M + + D+ +Y+ L+ G C VDKA +F+ + E DV +YN
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ G+C+ ++ E++ L M KN V N V+Y L GL G++ +A M +G
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 236 HRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEA 291
+ D T Y I + LC +++KA + + +V +Y +I CK R++EA
Sbjct: 390 Y-AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA-IALYKNNRDLC-----PFKILMDG 345
++ + M + +S LI + + +A L + ++ C + IL+ G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 346 LRKNG 350
L K G
Sbjct: 509 LCKAG 513
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 13/274 (4%)
Query: 102 SFNIIMDAL--CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
S+N +++A KQ + +E+ +E GV P++ +Y +L+ C K + +KAR D
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETA--GVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
M + G PDV+SY+ +I K ++D+A+ L ++M + + P+ Y L DG +
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSY 275
A R+ P++ +NI++ L + +D KI+ + E ++ +Y
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 276 NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY----- 330
+ LI G C G VD+A S++ + R D T+ ++ FC+ + +++ L+
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH 353
Query: 331 KNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGA 364
KN+ ++ + IL+ GL +NG + A + +L A
Sbjct: 354 KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 12/228 (5%)
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G +P + SY L++ + + K LF AG+ P++ +YN+LI+ CK + ++A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
+ M + P+ +Y + + L + G+L DA M RG PD+T YNI+++
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILID 227
Query: 250 T-LCEQHLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIV 304
L E+ A ++++ L+ + PNV+++NI+ISG K GRVD+ + I++ M
Sbjct: 228 GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287
Query: 305 RDSETFKLLINAFCKRKQCDKAIALY------KNNRDLCPFKILMDGL 346
+D T+ LI+ C DKA +++ K + D+ + ++ G
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GLCK+ G A ++E+ KP+L Y+ ++ GLC+D ++ A +L +
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLE-NGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL----NEN-SLDVCSFNIIMDALCKQGLL 116
+Q G+ DV+ + LI+G C + + ++ + N + ++ ++N +M+ K G
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + M K G+QPD+ISY +M G C+ V A + FD G+ P V+++NIL
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Query: 177 IQG 179
++
Sbjct: 681 VRA 683
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 15/317 (4%)
Query: 28 LQLVKPNLVIYNTVIHGL-----CKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH 82
L+++K + V+YN V + L K+G ++ A+KL EM +RGI DV ++SLI C
Sbjct: 282 LKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341
Query: 83 ADQWKEVRLL---LNENSLDVCSFN--IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
K LL L E L S+ ++D +CK G + A + EM +GV +
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
+ L+DGYC K VD+A ++D+M + G DV++ N + + +++R DEA M+
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HL 256
+ + V+Y L D C+ G + +A M +G +P +T YN+++ C+Q +
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT-YNVMIYAYCKQGKI 520
Query: 257 DKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLL 313
+A K+ ++ +P+ +Y LI G C VDEAM ++ M L+ + ++S T+ ++
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 314 INAFCKRKQCDKAIALY 330
I+ K + D+A LY
Sbjct: 581 ISGLSKAGKSDEAFGLY 597
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 130/240 (54%), Gaps = 6/240 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG L+ G+CK G A + E+++ + V V++NT+I G C+ G+V++A + M
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQS-KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
Q+G DV T +++ F ++ E R++ L S+ ++D CK+G +
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EM +GVQP+ I+Y +++ YC + K+ +ARKL M G+ PD ++Y L
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G C + VDEAM L +M K L N+VTY + GL + G+ +A+ M +G+
Sbjct: 546 IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 170/374 (45%), Gaps = 49/374 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
VK + V+ GLC+ G V K++KL E +GI P+ T++++I + + V
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 91 LLLNENSLDVCSFN-----IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+L D +N ++M+ K G + +A + EM +RG++ DV YT L+
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C K + +A LFD + E GL P ++Y LI G CK+ + A L +M +K +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 206 VTYKYLFDGLCRFG-----------------------------------RLPDAWNFLTR 230
V + L DG CR G R +A +L R
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 231 MHYRGHRPPDLTPYNIILETLCEQHLDKANKIF---NSLIPEPNVQSYNILISGYCKNGR 287
M G + ++ N+I E ++++A ++F +S +PN +YN++I YCK G+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKI 341
+ EA + NM + DS T+ LI+ C D+A+ L+ +++ + +
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 342 LMDGLRKNGMEEVA 355
++ GL K G + A
Sbjct: 580 MISGLSKAGKSDEA 593
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 106 IMDALCKQGLLLEAHA---------------VCYEMIKR----GVQPDVISYTILMDGYC 146
+ D + K+GL ++ + +C E+ +R GV+ V S TI+++G C
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ +V+K++KL G+ P+ ++YN +I Y K + + M +V N V
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
TY L + + G++ DA M RG D+ Y ++ C + ++ +A +F+
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGI-ESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
L + P+ +Y LI G CK G + A + M + + F LI+ +C++
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 323 CDKAIALY 330
D+A +Y
Sbjct: 415 VDEASMIY 422
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 145/347 (41%), Gaps = 21/347 (6%)
Query: 22 LQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC 81
L+E E+ +KP+L T+ H L + N+ + L + ++ G + V L
Sbjct: 86 LREFESN--LKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPV--EELGSAMV 141
Query: 82 HADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
D + + F+++ G+ E V M+K+G+ D S +
Sbjct: 142 DCD------ISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVF 195
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+ + ++D ++F M+++G+ V+S I+++G C+ V+++ L ++ K +
Sbjct: 196 LVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGI 255
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE-TLCEQHLDKAN 260
P A TY + + + L M G +T Y +++E ++ + A
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVT-YTLLMELSVKNGKMSDAE 314
Query: 261 KIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
K+F+ + E +V Y LIS C+ G + A ++ + + + S T+ LI+
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 318 CKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
CK + A L N F L+DG + GM + A +
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMI 421
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 170/337 (50%), Gaps = 13/337 (3%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
+L++G CK+ +A+ ++E + PN V ++ +I K+G + KA + +M
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEK-EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVCSFNIIMDALCKQGLLL 117
G+ P V ++I G+ + +E L +E+ ++ VC N I+ LCKQG
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC--NTILSWLCKQGKTD 460
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + +M RG+ P+V+SY +M G+C + +D AR +F ++E GL P+ ++Y+ILI
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
G + A+ + M + N+ N V Y+ + +GLC+ G+ A L M
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 238 PPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
YN I++ E +D A + + PNV +Y L++G CKN R+D+A+
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+ M + + D + LI+ FCKR + A AL+
Sbjct: 641 MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 173/338 (51%), Gaps = 12/338 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G ++ NA++ + + + ++ N V+Y T+I+GLCK G +KA++L + M
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSN-IEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 62 IQ-RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
I+ + + ++++S+I GF + E S +V ++ +M+ LCK
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ +A + EM +GV+ D+ +Y L+DG+C + ++ A LF ++E GL P YN
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G+ + + A++L + ML L + TY L DGL + G L A T M G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
P ++ Y +I+ L ++ K K+F + PNV YN +I+G+ + G +DEA
Sbjct: 755 LVPDEII-YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
++ M + I+ D TF +L++ Q +A +L
Sbjct: 814 FRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 182/412 (44%), Gaps = 52/412 (12%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y + CK+ A L+E++ +L P+ Y +VI K G ++ A +L E
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGL 115
M+ GI +VV +SLI G C + +L ++ S + +F+++++ K G
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ +A +M G+ P V ++ G+ K ++A KLFD E GL +V+ N
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNT 448
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ CK + DEA L M ++ + PN V+Y + G CR + A + + +G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 236 HRPPDLT----------------------------------PYNIILETLCE-QHLDKAN 260
+P + T Y I+ LC+ KA
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 261 KIFNSLIPEPNV----QSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++ ++I E + SYN +I G+ K G +D A++ Y+ MC I + T+ L+N
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 317 FCKRKQCDKAIALYKNNR------DLCPFKILMDGL-RKNGMEEVAQRVSQL 361
CK + D+A+ + + D+ + L+DG +++ ME + S+L
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 52/349 (14%)
Query: 53 KAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA----------DQWKEVRL----------- 91
+A ++ S I+RG PD + +S + C + KE +L
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 92 --------------------LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGV 131
L + S++V + ++ CK L+ A + +M K G
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
P+ +++++L++ + +++KA + + M GL P V+ + +IQG+ K ++ +EA+
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
L ++ L N + LC+ G+ +A L++M RG P ++ N++L
Sbjct: 431 LFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 252 CEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
++++D A +F++++ +PN +Y+ILI G +N A+ + +M NI +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 309 TFKLLINAFCKRKQCDKAIALYKN---NRDLC----PFKILMDGLRKNG 350
++ +IN CK Q KA L N + LC + ++DG K G
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 28/296 (9%)
Query: 50 LVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-SLDVCSF----N 104
LV+ A+ E+ R F+ L+ + Q ++N+ LDV F N
Sbjct: 150 LVDSAKSFGFEVNSRA-------FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202
Query: 105 IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEA 164
+ AL ++ L EA + M+ GV D ++ +LM + K +A ++ IE
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 165 GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL-VPNAVTYKYLFDGLCRFGRLPD 223
G PD Y++ +Q CK + A +L +M K L VP+ TY + + G + D
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 224 AWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI---------PEPNVQS 274
A M G N++ T K N + ++L+ P PN +
Sbjct: 323 AIRLKDEMLSDG------ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+++LI + KNG +++A+ Y+ M + + +I + K ++ ++A+ L+
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 432
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 18/240 (7%)
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G + + ++ L++ Y + D A + + M+E ++P N + + + EA
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
L M+ + + VT + L R + +A L+R RG P L Y++ ++
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLL-YSLAVQ 276
Query: 250 TLCEQHLDKANKIFNSLIPE--------PNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
C + LD A + NSL+ E P+ ++Y +I K G +D+A+ + M
Sbjct: 277 ACC-KTLDLA--MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSD 333
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCP------FKILMDGLRKNGMEEVA 355
I + LI CK A+ L+ P F +L++ RKNG E A
Sbjct: 334 GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKA 393
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 174/341 (51%), Gaps = 13/341 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
Y T++ G CK NA +EL+ L+ P L + T+I+G CK+G + +L SE
Sbjct: 242 FYNTIIGGYCKLGDIENAYLVFKELK-LKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 61 MIQRGIFPDVVTFSSLI-----YGFCHADQWKEVRLLL-NENSLDVCSFNIIMDALCKQG 114
+ +RG+ V +++I +G+ D + + ++ N+ DV ++NI+++ LCK+G
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGY-KVDPAESIGWIIANDCKPDVATYNILINRLCKEG 359
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
A E K+G+ P+ +SY L+ YC + D A KL M E G PD+ +Y
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYG 419
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
ILI G +D+A+N+ ++ + + P+A Y L GLC+ GR A + M R
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Query: 235 GHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQ----SYNILISGYCKNGRVDE 290
P +I + D+A K+F SL E V+ +N +I G+C++G +DE
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
A++ M ++V D T+ +I+ + K++ AI +++
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 10/328 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++ LCK A+ L E L+ PN + Y +I CK + A KL +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLI-PNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 62 IQRGIFPDVVTFSSLIYGFC---HADQW--KEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+RG PD+VT+ LI+G H D +V+L+ S D +N++M LCK G
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
L A + EM+ R + PD Y L+DG+ D+ARK+F + +E G+ DV +N +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+C+ +DEA+ M ++LVP+ TY + DG + + A M
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMS 293
+P +T ++I C+ A + F + PNV +Y LI K E
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 294 IYQNMCLRN-IVRDSETFKLLINAFCKR 320
Y + + N V + TF L+ F K+
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 164/339 (48%), Gaps = 17/339 (5%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNT--VIHGLCKDGLVNKAQKLCSEM 61
+L+S L KS+ G+A + E+ N Y+T ++ G+C +G V +KL
Sbjct: 175 SLLSLLVKSRRLGDARKVYDEMCDRGDSVDN---YSTCILVKGMCNEGKVEVGRKLIEGR 231
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLD-----VCSFNIIMDALCKQGLL 116
+G P++V ++++I G+C + L+ E L + +F +++ CK+G
Sbjct: 232 WGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDF 291
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDG-YCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ + + E+ +RG++ V ++D Y KVD A + +I PDV +YNI
Sbjct: 292 VASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNI 350
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI CK + + A+ ++ K L+PN ++Y L C+ A L +M RG
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERG 410
Query: 236 HRPPDLTPYNIILETL-CEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
+ PD+ Y I++ L H+D A + LI P+ YN+L+SG CK GR A
Sbjct: 411 CK-PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
++ M RNI+ D+ + LI+ F + D+A ++
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 26/310 (8%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y LMSGLCK+ A E+ ++ P+ +Y T+I G + G ++A+K+ S
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL-PDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRL---LLNENSL--DVCSFNIIMDALCKQGL 115
+++G+ DVV +++I GFC + E +NE L D +++ I+D KQ
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ A + M K +P+V++YT L++G+C + A + F M LVP+V +Y
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630
Query: 176 LIQGYCK-IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR--FGRL---PDAWN--- 226
LI+ K +++A+ E M+T VPN VT+ L G + G++ PD N
Sbjct: 631 LIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690
Query: 227 ------FLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE----PNVQSYN 276
F RM G YN L LC + K +F + + P+ S+
Sbjct: 691 SSLFSEFFHRMKSDGW-SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749
Query: 277 ILISGYCKNG 286
++ G+C G
Sbjct: 750 AILHGFCVVG 759
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 11/284 (3%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
DV + N ++ L K L +A V EM RG D S IL+ G C + KV+ RKL
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ G +P++ YN +I GYCK+ ++ A + +++ K +P T+ + +G C+
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPE--PNVQSY 275
G + L+ + RG R NII + +D A I + + P+V +Y
Sbjct: 289 GDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATY 348
Query: 276 NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--- 332
NILI+ CK G+ + A+ + ++ ++ ++ LI A+CK K+ D A L
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 333 ---NRDLCPFKILMDGLRKNGM--EEVAQRVSQLYGACDPDVAL 371
D+ + IL+ GL +G + V +V + PD A+
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC---HADQWKEVRLL-L 93
YN+ + LC G+V A +M+++G PD V+F+++++GFC ++ QW+ + L
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNL 772
Query: 94 NENSLDVC-SFNIIMDALCKQGLLLEAHAVCYEMIKRG 130
E L+V ++ +++ Q ++ EA + + M+++
Sbjct: 773 GEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKA 810
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 196/435 (45%), Gaps = 88/435 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ LC+S L+++ +++ PN V YNT+I+G +G V A +L +EM
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRK-RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE--------------------------------- 88
+ G+ P+ VTF++LI G +KE
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 89 -------VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
+R+ N + ++ ++D LCK G L EA + EM K G+ PD+++Y+ L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 142 MDGYC----------LKCKV-------------------------DKARKLFDMMIEAGL 166
++G+C + C++ +A ++++ MI G
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
D +++N+L+ CK +V EA M + ++PN V++ L +G G A++
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGY 282
M GH P T Y +L+ LC+ HL +A K SL P + YN L++
Sbjct: 605 VFDEMTKVGHHPTFFT-YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR---DLCPF 339
CK+G + +A+S++ M R+I+ DS T+ LI+ C++ + AI K ++ P
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 340 KIL----MDGLRKNG 350
K++ +DG+ K G
Sbjct: 724 KVMYTCFVDGMFKAG 738
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 17/371 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ CK AI+ L +++ + V ++ YN +IH LC+ + K L +M
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+R I P+ VT+++LI GF + + LLNE S + +FN ++D +G
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + Y M +G+ P +SY +L+DG C + D AR + M G+ +Y +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK +DEA+ L +M + P+ VTY L +G C+ GR A + R+ YR
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-YRVG 508
Query: 237 RPPDLTPYNIILETLCEQH-LDKANKIFNSLIPEPNVQ---SYNILISGYCKNGRVDEAM 292
P+ Y+ ++ C L +A +I+ ++I E + + ++N+L++ CK G+V EA
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK------NNRDLCPFKILMDGL 346
+ M I+ ++ +F LIN + + KA +++ ++ + L+ GL
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 347 RKNGMEEVAQR 357
K G A++
Sbjct: 629 CKGGHLREAEK 639
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 177/375 (47%), Gaps = 45/375 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ GLCK+ A+ L E+ + P++V Y+ +I+G CK G A+++ +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G+ P+ + +S+LIY C KE ++L ++ D +FN+++ +LCK G +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA M G+ P+ +S+ L++GY + KA +FD M + G P ++Y L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 177 IQGYCKIERVDEA-----------------------------------MNLCEDMLTKNL 201
++G CK + EA ++L +M+ +++
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
+P++ TY L GLCR G+ A F RG+ P+ Y ++ + + KA
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 262 IF----NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
F ++L P++ + N +I GY + G++++ + M +N + T+ +L++ +
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 318 CKRKQCDKAIALYKN 332
KRK + LY++
Sbjct: 805 SKRKDVSTSFLLYRS 819
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 170/369 (46%), Gaps = 21/369 (5%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
+LMSG KS A+ T +L N +Y+ +I ++G++ + ++ M
Sbjct: 139 SLMSG--KSSFVFGALMT-----TYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGL 191
Query: 64 RGIFPDVVTFSSLIYGFCHADQ----WKEVRLLLNENSL-DVCSFNIIMDALCKQGLLLE 118
G P V T ++++ + + W ++ +L DV +FNI+++ LC +G +
Sbjct: 192 YGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEK 251
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
+ + +M K G P +++Y ++ YC K + A +L D M G+ DV +YN+LI
Sbjct: 252 SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH 311
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
C+ R+ + L DM + + PN VTY L +G G++ A L M G P
Sbjct: 312 DLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSP 371
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
+T +I + E + +A K+F + + P+ SY +L+ G CKN D A Y
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKN 349
M + T+ +I+ CK D+A+ L + D+ + L++G K
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491
Query: 350 GMEEVAQRV 358
G + A+ +
Sbjct: 492 GRFKTAKEI 500
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 152/349 (43%), Gaps = 14/349 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG+L+ GLCK A + L+ L A+ + V+YNT++ +CK G + KA L EM
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVP-AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL------DVCSFNIIMDALCKQGL 115
+QR I PD T++SLI G C + L E + + +D + K G
Sbjct: 680 VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+M G PD+++ ++DGY K++K L M P++ +YNI
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ GY K + V + L ++ ++P+ +T L G+C L L RG
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 859
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKAN---KIFNSLIPEPNVQSYNILISGYCKNGRVDEA 291
D +N+++ C ++ A K+ SL + + + ++S +N R E+
Sbjct: 860 -VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP 338
+ M + I +S + LIN C+ A + + +CP
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 151/341 (44%), Gaps = 12/341 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
MY TL++ +CKS A+ E+ ++ P+ Y ++I GLC+ G A E
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL-PDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 61 MIQRG-IFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQG 114
RG + P+ V ++ + G A QWK + ++ D+ + N ++D + G
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ + + + EM + P++ +Y IL+ GY + V + L+ +I G++PD + +
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
L+ G C+ ++ + + + + + + + T+ L C G + A++ + M
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893
Query: 235 GHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
G D + ++ L H ++ + + + + P + Y LI+G C+ G +
Sbjct: 894 G-ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
A + + M I + ++ A K + D+A L +
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 163/396 (41%), Gaps = 53/396 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+SGLC+ + AI +E EA V PN V+Y + G+ K G +M
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
G PD+VT +++I G+ + ++ LL E ++ ++NI++ K+ +
Sbjct: 751 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + +I G+ PD ++ L+ G C ++ K+ I G+ D +++N+L
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 177 IQGYC-----------------------------------KIERVDEAMNLCEDMLTKNL 201
I C + R E+ + +M + +
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR--PPDLTPYNIILETLCEQHLDKA 259
P + Y L +GLCR G + A F+ + H+ PP++ ++ D+A
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTA--FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 260 NKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+ ++ P + S+ L+ CKNG V EA+ + M + D ++ +LI
Sbjct: 989 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1048
Query: 317 FCKRKQCDKAIALYKNNR------DLCPFKILMDGL 346
C + A LY+ + + +K L+ GL
Sbjct: 1049 LCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 132/299 (44%), Gaps = 12/299 (4%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PNL YN ++HG K V+ + L +I GI PD +T SL+ G C ++ E+ L
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML-EIGLK 850
Query: 93 LNEN------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ + +D +FN+++ C G + A + M G+ D + ++
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ ++R + M + G+ P+ Y LI G C++ + A + E+M+ + P V
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ----HLDKANKI 262
+ L + G+ +A L R + P + + ++ C+ + +
Sbjct: 971 AESAMVRALAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 1029
Query: 263 FNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
++ + ++ SYN+LI+G C G + A +Y+ M + ++ T+K LI R+
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1088
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 171/336 (50%), Gaps = 43/336 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLV--KPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+ L+ GLC G G A + L+ L + +P++V YNT+I G CK +NKA ++
Sbjct: 209 FNILIRGLC---GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 60 EMIQRGI-FPDVVTFSSLIYGFCHADQWKEVRLLLNEN-SLDV----CSFNIIMDALCKQ 113
++ + PDVVT++S+I G+C A + +E LL++ L + +FN+++D K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G +L A + +MI G PDV+++T L+DGYC +V + +L++ M G+ P+ ++Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
+ILI C R+ +A L + +K+++P Y + DG C+ G++ +A
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA--------- 436
Query: 234 RGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMS 293
N+I+E + E+ K +KI ++ ILI G+C GR+ EA+S
Sbjct: 437 -----------NVIVEEM-EKKKCKPDKI-----------TFTILIIGHCMKGRMFEAVS 473
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
I+ M D T L++ K +A L
Sbjct: 474 IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 161/337 (47%), Gaps = 46/337 (13%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW-KEVRLLLNEN 96
+N +I GLC G KA +L M G PD+VT+++LI GFC +++ K + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
S VCS PDV++YT ++ GYC K+ +A
Sbjct: 269 SGSVCS------------------------------PDVVTYTSMISGYCKAGKMREASS 298
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
L D M+ G+ P ++N+L+ GY K + A + M++ P+ VT+ L DG C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 217 RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSL-----IPEP 270
R G++ + M+ RG P T Y+I++ LC E L KA ++ L IP+P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFT-YSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+ YN +I G+CK G+V+EA I + M + D TF +LI C + + +A++++
Sbjct: 418 FM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 331 KN------NRDLCPFKILMDGLRKNGMEEVAQRVSQL 361
+ D L+ L K GM + A ++Q+
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 172/354 (48%), Gaps = 17/354 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK-EV 89
++ + YN + LCK GL + A ++ M G+ P+ L+ F +
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 90 RLLLNENSLDVCSF--NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
LLL ++ C N +++ L K + +A + E ++ D ++ IL+ G C
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL-VPNAV 206
K +KA +L +M G PD+ +YN LIQG+CK +++A + +D+ + ++ P+ V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
TY + G C+ G++ +A + L M G P ++T +N++++ + + A +I
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT-FNVLVDGYAKAGEMLTAEEIRGK 337
Query: 266 LIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+I P+V ++ LI GYC+ G+V + +++ M R + ++ T+ +LINA C +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 323 CDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRVSQLY--GACDPD 368
KA L ++D+ P + ++DG K G A + + C PD
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 171/336 (50%), Gaps = 43/336 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLV--KPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+ L+ GLC G G A + L+ L + +P++V YNT+I G CK +NKA ++
Sbjct: 209 FNILIRGLC---GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 60 EMIQRGI-FPDVVTFSSLIYGFCHADQWKEVRLLLNEN-SLDV----CSFNIIMDALCKQ 113
++ + PDVVT++S+I G+C A + +E LL++ L + +FN+++D K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G +L A + +MI G PDV+++T L+DGYC +V + +L++ M G+ P+ ++Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
+ILI C R+ +A L + +K+++P Y + DG C+ G++ +A
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA--------- 436
Query: 234 RGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMS 293
N+I+E + E+ K +KI ++ ILI G+C GR+ EA+S
Sbjct: 437 -----------NVIVEEM-EKKKCKPDKI-----------TFTILIIGHCMKGRMFEAVS 473
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
I+ M D T L++ K +A L
Sbjct: 474 IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 161/337 (47%), Gaps = 46/337 (13%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW-KEVRLLLNEN 96
+N +I GLC G KA +L M G PD+VT+++LI GFC +++ K + +
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
S VCS PDV++YT ++ GYC K+ +A
Sbjct: 269 SGSVCS------------------------------PDVVTYTSMISGYCKAGKMREASS 298
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
L D M+ G+ P ++N+L+ GY K + A + M++ P+ VT+ L DG C
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 217 RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSL-----IPEP 270
R G++ + M+ RG P T Y+I++ LC E L KA ++ L IP+P
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFT-YSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+ YN +I G+CK G+V+EA I + M + D TF +LI C + + +A++++
Sbjct: 418 FM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 331 KN------NRDLCPFKILMDGLRKNGMEEVAQRVSQL 361
+ D L+ L K GM + A ++Q+
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQI 512
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 172/354 (48%), Gaps = 17/354 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK-EV 89
++ + YN + LCK GL + A ++ M G+ P+ L+ F +
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 90 RLLLNENSLDVCSF--NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
LLL ++ C N +++ L K + +A + E ++ D ++ IL+ G C
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL-VPNAV 206
K +KA +L +M G PD+ +YN LIQG+CK +++A + +D+ + ++ P+ V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
TY + G C+ G++ +A + L M G P ++T +N++++ + + A +I
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT-FNVLVDGYAKAGEMLTAEEIRGK 337
Query: 266 LIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+I P+V ++ LI GYC+ G+V + +++ M R + ++ T+ +LINA C +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 323 CDKAIALYKN--NRDLCP----FKILMDGLRKNGMEEVAQRVSQLY--GACDPD 368
KA L ++D+ P + ++DG K G A + + C PD
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 173/328 (52%), Gaps = 18/328 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++S +C+ ++ +EL + +P + +YN +I+GLCK+ A +L EM
Sbjct: 219 YTTVISSMCEV----GLVKEGRELA--ERFEPVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNI-IMDALCK----QGLL 116
+++GI P+V+++S+LI C++ Q + L + C NI + +L K +G
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
Query: 117 LEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+A + +MI+ G+QP+V++Y L+ G+C + KA +F M E G P++ +Y
Sbjct: 333 FDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGS 392
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G+ K +D A+ + MLT PN V Y + + LCR + +A + + M +
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS-KE 451
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDE 290
+ P + +N ++ LC+ LD A K+F + + PN+ +YN L+ G K R++E
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFC 318
A + + + +R + S T+ L++ C
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 169/338 (50%), Gaps = 15/338 (4%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L++GLCK A + ++E+ + + PN++ Y+T+I+ LC G + A ++
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREM-VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 61 MIQRGIFPDVVTFSSLIYG-------FCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQ 113
M++RG P++ T SSL+ G F D W ++ +V ++N ++ C
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP-NVVAYNTLVQGFCSH 365
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G +++A +V M + G P++ +Y L++G+ + +D A +++ M+ +G P+V Y
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
+++ C+ + EA +L E M +N P+ T+ GLC GRL A +M
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 234 RGHRPPDLTPYNIILETLC-----EQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRV 288
+ PP++ YN +L+ L E+ +IF + E + +YN L+ G C G
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV-EWSSSTYNTLLHGSCNAGLP 544
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
A+ + M + D T ++I A+CK+ + ++A
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 19/344 (5%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+PN+ YN ++ LCK+ V+ A+KL EM +G PD V+++++I C KE R
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 92 LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
L V +N +++ LCK+ A + EM+++G+ P+VISY+ L++ C ++
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPNAVTYKY 210
+ A M++ G P++++ + L++G +A++L M+ L PN V Y
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE 269
L G C G + A + + M G P++ Y ++ ++ LD A I+N ++
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGC-SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 270 ---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
PNV Y ++ C++ + EA S+ + M N TF I C + D A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 327 IALYKN--NRDLCPFKI-----LMDGLRKNGMEEVAQRVSQLYG 363
+++ + CP I L+DGL K A R+ + YG
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAK------ANRIEEAYG 514
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 159/356 (44%), Gaps = 47/356 (13%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI 77
A+ + + L K + + +I L DG V+ Q L +M +G F S+I
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 78 YGFCH---ADQWKEVRLLLNENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
+ A++ E+ + E D V +N ++D L + + + V +M + G +
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 133 PDVISYTILMDGYCLKCKVDKARKLF-------------------DMMIEAGLV------ 167
P+V +Y +L+ C KVD A+KL M E GLV
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 168 -----PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
P V YN LI G CK A L +M+ K + PN ++Y L + LC G++
Sbjct: 239 AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIE 298
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNII----LETLCEQHLDKANKIFNSLIPEPNVQSYNIL 278
A++FLT+M RG P T +++ L LD N++ +PNV +YN L
Sbjct: 299 LAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTL 358
Query: 279 ISGYCKNGRVDEAMSIYQNM----CLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+ G+C +G + +A+S++ +M C NI T+ LIN F KR D A+ ++
Sbjct: 359 VQGFCSHGNIVKAVSVFSHMEEIGCSPNI----RTYGSLINGFAKRGSLDGAVYIW 410
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 145/300 (48%), Gaps = 15/300 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
++PN+V YNT++ G C G + KA + S M + G P++ T+ SLI GF
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 91 LLLNENSLDVCSFNIIM-----DALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ N+ C N+++ +ALC+ EA ++ M K P V ++ + G
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 146 CLKCKVDKARKLFDMMIEAGLVP-DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
C ++D A K+F M + P ++ +YN L+ G K R++EA L ++ + + +
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 527
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIF 263
+ TY L G C G A + +M G P ++T N+I+ C+Q ++A ++
Sbjct: 528 SSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT-MNMIILAYCKQGKAERAAQML 586
Query: 264 NSLIP------EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
+ L+ P+V SY +I G C++ ++ + + + M IV T+ +LIN F
Sbjct: 587 D-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ + GLC + A + +++E PN+V YN ++ GL K + +A L E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
RG+ T+++L++G C+A +++++ S D + N+I+ A CKQG
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG-K 578
Query: 117 LEAHAVCYEMI---KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
E A +++ +R +PDVISYT ++ G C + L + MI AG+VP + ++
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 174 NILI 177
++LI
Sbjct: 639 SVLI 642
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 14/369 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +++ LCK A L +E +KP +V YNT++ G G + A+ + SEM
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFG-IKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEA 119
+G PD+ T++ ++ C+ + EV + E L D S+NI++ G L A
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
A EM+K+G+ P +Y L+ G ++ K++ A L + E G+V D +YNILI G
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
YC+ +A L ++M+T + P TY L LCR + +A ++ +G +P
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP- 465
Query: 240 DLTPYNIILETLCE-QHLDKANKIFNSL---IPEPNVQSYNILISGYCKNGRVDEAMSIY 295
DL N +++ C ++D+A + + P+ +YN L+ G C G+ +EA +
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKN 349
M R I D ++ LI+ + K+ A + N L + L+ GL KN
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN 585
Query: 350 GMEEVAQRV 358
E+A+ +
Sbjct: 586 QEGELAEEL 594
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 165/324 (50%), Gaps = 14/324 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++S +C G A + L+E++ + LV P+ V YN +I G +G + A EM
Sbjct: 298 YNPILSWMC---NEGRASEVLREMKEIGLV-PDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGLL 116
+++G+ P T+++LI+G ++ + +L+ E LD ++NI+++ C+ G
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA 413
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A A+ EM+ G+QP +YT L+ C K K +A +LF+ ++ G+ PD+ N L
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G+C I +D A +L ++M ++ P+ VTY L GLC G+ +A + M RG
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI 533
Query: 237 RPPDLTPYNIILETLCE----QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAM 292
+ PD YN ++ + +H SL P + +YN L+ G KN + A
Sbjct: 534 K-PDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Query: 293 SIYQNMCLRNIVRDSETFKLLINA 316
+ + M IV + +F +I A
Sbjct: 593 ELLREMKSEGIVPNDSSFCSVIEA 616
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 159/332 (47%), Gaps = 19/332 (5%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
+L + ++++ ++ C+ +V++A + M ++G +P T + ++ ++ +
Sbjct: 149 RLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIEN 208
Query: 89 VRLLLN-----ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
+ E +V +FNI+++ LCK+G L +A M G++P +++Y L+
Sbjct: 209 AWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQ 268
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
G+ L+ +++ AR + M G PD+ +YN ++ C R E + +M LVP
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVP 325
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIF 263
++V+Y L G G L A+ + M +G P T YN ++ L ++ +A +I
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT-YNTLIHGLFMENKIEAAEIL 384
Query: 264 NSLIPEPNV----QSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
I E + +YNILI+GYC++G +A +++ M I T+ LI C+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 320 RKQCDKAIALYKN------NRDLCPFKILMDG 345
+ + +A L++ DL LMDG
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ LC+ + A + +++ + +KP+LV+ NT++ G C G +++A L EM
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVG-KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
I PD VT++ L+ G C +++E R L+ E D S+N ++ K+G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A V EM+ G P +++Y L+ G + + A +L M G+VP+ S+ +
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 177 IQGYCKIE 184
I+ ++
Sbjct: 614 IEAMSNLD 621
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 172/352 (48%), Gaps = 20/352 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+P + YN +I +CK+G V A+ L EM RG+ PD VT++S+I GF + +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
E DV ++N +++ CK G L EM G++P+V+SY+ L+D +
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + + +A K + M GLVP+ ++Y LI CKI + +A L +ML + N
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFN 264
VTY L DGLC R+ +A +M G P+L YN ++ + +++D+A ++ N
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAG-VIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
L +P++ Y I G C +++ A + M I +S + L++A+ K
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Query: 322 QCDKAIALYKNNRDL------CPFKILMDGLRKNGMEEVA----QRVSQLYG 363
+ + L ++L F +L+DGL KN + A R+S +G
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 174/375 (46%), Gaps = 18/375 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ +CK A +E++ LV P+ V YN++I G K G ++ EM
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWK---EVRLLLNENSL--DVCSFNIIMDALCKQGLL 116
PDV+T+++LI FC + E + N L +V S++ ++DA CK+G++
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A +M + G+ P+ +YT L+D C + A +L + M++ G+ +V +Y L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G C ER+ EA L M T ++PN +Y L G + + A L + RG
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQS----YNILISGYCKNGRVDEAM 292
+ PDL Y + LC +A K+ + + E +++ Y L+ Y K+G E +
Sbjct: 504 K-PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN-------NRDLCPFKILMDG 345
+ M +I TF +LI+ CK K KA+ + + F ++DG
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 346 LRKNGMEEVAQRVSQ 360
L K+ E A + +
Sbjct: 623 LCKDNQVEAATTLFE 637
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 185/378 (48%), Gaps = 28/378 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++ G K + + +E++ + +P+++ YN +I+ CK G + + EM
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDM-CCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE-VRLLLNENSLDVC----SFNIIMDALCKQGLL 116
G+ P+VV++S+L+ FC ++ ++ ++ + + ++ ++DA CK G L
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + EM++ GV+ +V++YT L+DG C ++ +A +LF M AG++P++ SYN L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+ K + +D A+ L ++ + + P+ + Y GLC ++ A + M G
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 237 RPPDLTPYNIILETLCEQHLDKANKI--------FNSLIPEPNVQSYNILISGYCKNGRV 288
+ L I TL + + N L E V ++ +LI G CKN V
Sbjct: 539 KANSL-----IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLV 593
Query: 289 DEAMSIYQNMCLR-NIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP----FKI 341
+A+ + + + ++ F +I+ CK Q + A L++ + L P +
Sbjct: 594 SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTS 653
Query: 342 LMDGLRKNG--MEEVAQR 357
LMDG K G +E +A R
Sbjct: 654 LMDGNFKQGNVLEALALR 671
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 149/306 (48%), Gaps = 10/306 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P +++ + L G++ +A + S+M + +FP + + L++ F + +V+
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 93 LNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ V ++NI++D +CK+G + A + EM RG+ PD ++Y ++DG+
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++D F+ M + PDV +YN LI +CK ++ + +M L PN V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
Y L D C+ G + A F M G P + T Y +++ C+ +L A ++ N +
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT-YTSLIDANCKIGNLSDAFRLGNEM 428
Query: 267 IP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ E NV +Y LI G C R+ EA ++ M ++ + ++ LI+ F K K
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 324 DKAIAL 329
D+A+ L
Sbjct: 489 DRALEL 494
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 159/334 (47%), Gaps = 10/334 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ CK AI+ ++ + LV PN Y ++I CK G ++ A +L +EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+Q G+ +VVT+++LI G C A++ KE L + ++ S+N ++ K +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + E+ RG++PD++ Y + G C K++ A+ + + M E G+ + Y L
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ Y K E ++L ++M ++ VT+ L DGLC+ + A ++ R+
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
+ + +++ LC + ++ A +F ++ + P+ +Y L+ G K G V EA+
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
++ M + D + L+ Q KA
Sbjct: 669 ALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 42/281 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GLC ++ A + +++ ++ PNL YN +IHG K +++A +L +E+
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVI-PNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE--------NSL--------------- 98
RGI PD++ + + I+G C ++ + ++++NE NSL
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 99 -----------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKR-GVQPDVISYTI 140
V +F +++D LCK L+ +A + G+Q + +T
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
++DG C +V+ A LF+ M++ GLVPD +Y L+ G K V EA+ L + M
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ + + Y L GL +L A +FL M G P ++
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 32/204 (15%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ GLCK+K A+ + ++ N I+ +I GLCKD V A L +M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+Q+G+ PD ++SL MD KQG +LEA A
Sbjct: 640 VQKGLVPDRTAYTSL------------------------------MDGNFKQGNVLEALA 669
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD-VWSYNILIQGY 180
+ +M + G++ D+++YT L+ G ++ KAR + MI G+ PD V ++L + Y
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 181 CKIERVDEAMNLCEDMLTKNLVPN 204
++ +DEA+ L ++ L+ +
Sbjct: 730 -ELGCIDEAVELQSYLMKHQLLTS 752
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 198 TKNL-VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QH 255
T+N+ VP + LF L G L +A ++M R P N +L +
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMK-RFRVFPKTRSCNGLLHRFAKLGK 242
Query: 256 LDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
D + F +I P V +YNI+I CK G V+ A +++ M R +V D+ T+
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 302
Query: 313 LINAFCKRKQCDKAIALYKNNRDLC 337
+I+ F K + D + ++ +D+C
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMC 327
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 174/372 (46%), Gaps = 47/372 (12%)
Query: 9 LCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP 68
LC+ G A+QT + + +P++V Y +I+GL + G V A ++ + MI+ G+ P
Sbjct: 124 LCRENKVGFAVQTFFCM-VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSP 182
Query: 69 DVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVCSFNIIMDALCKQGLLLEAHAV 122
D ++L+ G CHA + ++ E L +N ++ CK G + +A A+
Sbjct: 183 DNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Query: 123 CYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK 182
M K G +PD+++Y +L++ Y + +A + M+ +G+ D +SYN L++ +C+
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Query: 183 IERVD-----------------------------------EAMNLCEDMLTKNLVPNAVT 207
+ D +A L E+M K +V N VT
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSL 266
Y L R G A L +M G PD Y IL+ LC+ ++DKA +FN +
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELG-LSPDRIFYTTILDHLCKSGNVDKAYGVFNDM 421
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
I P+ SYN LISG C++GRV EA+ ++++M + D TFK +I + K+
Sbjct: 422 IEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKL 481
Query: 324 DKAIALYKNNRD 335
A ++ D
Sbjct: 482 SAAYKVWDQMMD 493
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 41/275 (14%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+SG CK+ G + L+ + +P+LV YN +++ + ++ +A+ + +E
Sbjct: 222 VYNALISGFCKA-GRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 61 MIQRGI-----------------------------------FPDVVTFSSLIYGFCHADQ 85
M++ GI F DVV++S+LI FC A
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 86 WKEVRLLLNENS-----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
++ L E ++V ++ ++ A ++G A + +M + G+ PD I YT
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
++D C VDKA +F+ MIE + PD SYN LI G C+ RV EA+ L EDM K
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
P+ +T+K++ GL R +L A+ +M +G
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 174/374 (46%), Gaps = 20/374 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y + ++ L KS NA+Q E+ + YN I L ++ A+ + +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSY-RVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
G T+S I G C ++ + LL++ D+ +FN+ +D LC++ +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + M++RG +PDV+SYTIL++G KV A ++++ MI +G+ PD + L
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 177 IQGYCKIERVDEAMNL-CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+ G C +VD A + E++ + + + V Y L G C+ GR+ A + M G
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 236 HRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
PDL YN++L + + L +A + ++ + + SYN L+ +C+ D+
Sbjct: 251 CE-PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 292 MS-IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMD 344
+ + + M R D ++ LI FC+ KA L++ R ++ + L+
Sbjct: 310 YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 345 GLRKNGMEEVAQRV 358
+ G VA+++
Sbjct: 369 AFLREGNSSVAKKL 382
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ C++ + A + +E+ +V N+V Y ++I ++G + A+KL +M
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVM-NVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
+ G+ PD + +++++ C + + + N E + D S+N ++ LC+ G +
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + +M + PD +++ ++ G K+ A K++D M++ G D + L
Sbjct: 447 TEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTL 506
Query: 177 IQGYCKIE 184
I+ C +
Sbjct: 507 IKASCSMS 514
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 177/382 (46%), Gaps = 57/382 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +L+S L K +G A E+ V P+ +NT+I+G CK+ +V++A ++ +M
Sbjct: 176 FNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM 235
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
PDVVT++++I D LC+ G + AH
Sbjct: 236 ELYHCNPDVVTYNTII------------------------------DGLCRAGKVKIAHN 265
Query: 122 VCYEMIKRG--VQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
V M+K+ V P+V+SYT L+ GYC+K ++D+A +F M+ GL P+ +YN LI+G
Sbjct: 266 VLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG 325
Query: 180 YCKIERVDEAMNLC---EDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM-HYRG 235
+ R DE ++ D T P+A T+ L C G L A M + +
Sbjct: 326 LSEAHRYDEIKDILIGGNDAFT-TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 384
Query: 236 HRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP----------EPNVQSYNILISGYCK 284
H PD Y++++ TLC D+A +FN L +P +YN + C
Sbjct: 385 H--PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCA 442
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL--YKNNRDLCP---- 338
NG+ +A +++ + R V+D ++K LI C+ + A L R+ P
Sbjct: 443 NGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLET 501
Query: 339 FKILMDGLRKNGMEEVAQRVSQ 360
+++L+DGL K G +A Q
Sbjct: 502 YELLIDGLLKIGEALLAHDTLQ 523
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 42/303 (13%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI--------YGFCHADQWKEV 89
+N++I GL ++ KL M Q GI P V+TF+SL+ G H D + E+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH-DLFDEM 199
Query: 90 RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
R D +FN +++ CK ++ EA + +M PDV++Y ++DG C
Sbjct: 200 RRTYGVTP-DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 150 KVDKARKLFDMMIEAG--LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
KV A + M++ + P+V SY L++GYC + +DEA+ + DML++ L PNAVT
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
Y L GL HR Y+ I + L N F +
Sbjct: 319 YNTLIKGLSE-----------------AHR------YDEIKDILI-----GGNDAFTTFA 350
Query: 268 PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
P+ ++NILI +C G +D AM ++Q M + DS ++ +LI C R + D+A
Sbjct: 351 PD--ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 328 ALY 330
L+
Sbjct: 409 TLF 411
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 195/451 (43%), Gaps = 94/451 (20%)
Query: 2 YGTLMSGLCKS---KGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLC 58
Y T++ GLC++ K + N + + L+ V PN+V Y T++ G C +++A +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGM--LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVF 304
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR-LLLNEN------SLDVCSFNIIMDALC 111
+M+ RG+ P+ VT+++LI G A ++ E++ +L+ N + D C+FNI++ A C
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL----- 166
G L A V EM+ + PD SY++L+ C++ + D+A LF+ + E +
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Query: 167 ------------------------------------VPDVWSYNILIQGYCKIERVDEAM 190
V D SY LI G+C+ + A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAY 484
Query: 191 NLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII--- 247
L ML + VP+ TY+ L DGL + G A + L RM + P T ++++
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Query: 248 ----------------LETLCEQHLDKANKIFNSLIPEPNVQSYNILI-----SGY---- 282
LE Q++D + ++ L + +++ +GY
Sbjct: 545 AKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKM 604
Query: 283 -------CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK---- 331
C+N ++ +A ++ ++ + D +T +I CK K+ +A +LY
Sbjct: 605 EELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVE 664
Query: 332 --NNRDLCPFKILMDGLRKNGMEEVAQRVSQ 360
N++ L +L + L G E Q VS+
Sbjct: 665 LGNHQQLSCHVVLRNALEAAGKWEELQFVSK 695
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 119/237 (50%), Gaps = 8/237 (3%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
FN ++ + GL E+ + M + G+ P V+++ L+ + + A LFD M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 163 EA-GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
G+ PD +++N LI G+CK VDEA + +DM + P+ VTY + DGLCR G++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 222 PDAWNFLTRMHYRGHR-PPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYN 276
A N L+ M + P++ Y ++ C +Q +D+A +F+ ++ +PN +YN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 277 ILISGYCKNGRVDEAMSIY--QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
LI G + R DE I N D+ TF +LI A C D A+ +++
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 377
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMC-LRNIVRDSETFKLLINAFCKRKQCDKAIA 328
P+V ++N L+S K GR A ++ M + DS TF LIN FCK D+A
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 329 LYKN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
++K+ N D+ + ++DGL + G ++A V
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 43/328 (13%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
N+ ++N +++ CK+G ++ AQK+ E+ +R + P VV+F++LI G+C E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 94 NE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
++ DV +++ +++ALCK+ + AH + EM KRG+ P+ + +T L+ G+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
++D ++ + M+ GL PD+ YN L+ G+CK + A N+ + M+ + L P+ +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP 268
L DG CR G + A M G LD+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNG------------------IELDRV--------- 451
Query: 269 EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
++ L+ G CK GRV +A + M I D T+ ++++AFCK+
Sbjct: 452 -----GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 329 LYKNNR------DLCPFKILMDGLRKNG 350
L K + + + +L++GL K G
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 173/340 (50%), Gaps = 20/340 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL++G CK + ++E + +P++ Y+ +I+ LCK+ ++ A L EM
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSR-TRPDVFTYSALINALCKENKMDGAHGLFDEM 336
Query: 62 IQRGIFPDVVTFSSLIYGFC---HADQWKEV--RLLLNENSLDVCSFNIIMDALCKQGLL 116
+RG+ P+ V F++LI+G D KE ++L D+ +N +++ CK G L
Sbjct: 337 CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ A + MI+RG++PD I+YT L+DG+C V+ A ++ M + G+ D ++ L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G CK RV +A +ML + P+ VTY + D C+ G + L M GH
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P +T YN++L LC+ + A+ + ++++ P+ +YN L+ G+ ++ +
Sbjct: 517 VPSVVT-YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKR- 574
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
Y IV D ++K ++N + D+A ++N
Sbjct: 575 --YIQKPEIGIVADLASYKSIVN------ELDRASKDHRN 606
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 39/348 (11%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ LM+ CK +A + E+ L +P +V +NT+I+G CK G +++ +L +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSL-QPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGL----- 115
M + PDV T+S+LI C EN +D + + D +CK+GL
Sbjct: 301 MEKSRTRPDVFTYSALINALC------------KENKMD--GAHGLFDEMCKRGLIPNDV 346
Query: 116 ----LLEAHAVCYE----------MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
L+ H+ E M+ +G+QPD++ Y L++G+C + AR + D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
I GL PD +Y LI G+C+ V+ A+ + ++M + + V + L G+C+ GR+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNI 277
DA L M G +P D+T Y ++++ C++ K+ + + P+V +YN+
Sbjct: 467 IDAERALREMLRAGIKPDDVT-YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
L++G CK G++ A + M +V D T+ L+ + K
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 11/263 (4%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
L+V FNI+M+ CK+G + +A V E+ KR +QP V+S+ L++GYC +D+ +L
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
M ++ PDV++Y+ LI CK ++D A L ++M + L+PN V + L G R
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQ 273
G + +M +G + PD+ YN ++ C+ L A I + +I P+
Sbjct: 358 NGEIDLMKESYQKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC-DKAIALYKN 332
+Y LI G+C+ G V+ A+ I + M I D F L+ CK + D AL +
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 333 NR-----DLCPFKILMDGLRKNG 350
R D + ++MD K G
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKG 499
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 21/260 (8%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
E++ G +V + ILM+ +C + + A+K+FD + + L P V S+N LI GYCK+
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
+DE L M P+ TY L + LC+ ++ A M RG L P
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG-----LIPN 344
Query: 245 NIILETLCEQH-----LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
++I TL H +D + + ++ +P++ YN L++G+CKNG + A +I
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
M R + D T+ LI+ FC+ + A+ + K D F L+ G+ K G
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 351 MEEVAQRV--SQLYGACDPD 368
A+R L PD
Sbjct: 465 RVIDAERALREMLRAGIKPD 484
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 189/382 (49%), Gaps = 16/382 (4%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+++ C+S A+ +E E+ ++ N+V YN++I+G G V ++ M +R
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 65 GIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEA 119
G+ +VVT++SLI G+C ++ + V LL E L D + ++MD C+ G + +A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
V MI+ GV+ + L++GYC ++ +A ++F M + L PD +YN L+ G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
YC+ VDEA+ LC+ M K +VP +TY L G R G D + M RG
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 240 DLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQ 296
+++ ++ ++A K++ +++ + + N++ISG CK +V+EA I
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL--YKNNRDLCP----FKILMDG-LRKN 349
N+ + +T++ L + + K +A A+ Y + + P + L+ G +
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 350 GMEEVAQRVSQLYG-ACDPDVA 370
+ +VA V +L P VA
Sbjct: 591 HLNKVADLVIELRARGLTPTVA 612
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 190/393 (48%), Gaps = 22/393 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
MYG LM G C++ +A++ + + V+ N I N++I+G CK G + +A+++ S
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIG-VRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGL 115
M + PD T+++L+ G+C A E ++ E V ++NI++ + G
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ ++ M+KRGV D IS + L++ ++A KL++ ++ GL+ D + N+
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+I G CK+E+V+EA + +++ P TY+ L G + G L +A+ M +G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 236 HRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
P + YN ++ + +HL+K + L P V +Y LI+G+C G +D+A
Sbjct: 572 IFPT-IEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLR--KN 349
+ M + I + + N+ + + D+A L + + F +L+ G + K
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK---IVDFDLLLPGYQSLKE 687
Query: 350 GMEEVA------QRVSQLYGACDPDVALVRNQL 376
+E A Q++++ P LV N +
Sbjct: 688 FLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 142/321 (44%), Gaps = 50/321 (15%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
MY TL+SG K + + EL A L P + Y +I G C G+++KA C E
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLT-PTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
MI++GI +V S + D+ E LLL + + F++++ LEA
Sbjct: 637 MIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK----IVDFDLLLPGYQSLKEFLEAS 692
Query: 121 AVC---YEMIKRGVQ---------PDVISYTILMDGYCLKCKVDKARKLF-DMMIEAGLV 167
A + I V+ P+ I Y + + G C K++ ARKLF D++ +
Sbjct: 693 ATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI 752
Query: 168 PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNF 227
PD ++Y ILI G +++A L ++M K ++PN VTY L GLC+ G + A
Sbjct: 753 PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL 812
Query: 228 LTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGR 287
L ++ +G PN +YN LI G K+G
Sbjct: 813 LHKLPQKG--------------------------------ITPNAITYNTLIDGLVKSGN 840
Query: 288 VDEAMSIYQNMCLRNIVRDSE 308
V EAM + + M + +VR S+
Sbjct: 841 VAEAMRLKEKMIEKGLVRGSD 861
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 159/313 (50%), Gaps = 19/313 (6%)
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVCSFNIIMDALCKQ 113
+MI + PDV T S ++ +C + + + E L+V ++N +++
Sbjct: 215 QMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G + V M +RGV +V++YT L+ GYC K +++A +F+++ E LV D Y
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
+L+ GYC+ ++ +A+ + ++M+ + N L +G C+ G+L +A +RM+
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 234 RGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVD 289
+ PD YN +++ C ++D+A K+ + + + P V +YNIL+ GY + G
Sbjct: 395 WSLK-PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN------RDLCPFKILM 343
+ +S+++ M R + D + L+ A K ++A+ L++N D +++
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 344 DGLRKNGMEEVAQ 356
GL K ME+V +
Sbjct: 514 SGLCK--MEKVNE 524
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 178/381 (46%), Gaps = 26/381 (6%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
++SGLCK + A + L + + KP + Y + HG K G + +A + M ++
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFR-CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 65 GIFPDVVTFSSLIYG---FCHADQWKEVRLLLNENSLD--VCSFNIIMDALCKQGLLLEA 119
GIFP + +++LI G + H ++ ++ + L L V ++ ++ C G++ +A
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV-PDVWSYNILIQ 178
+A C+EMI++G+ +V + + + K+D+A L +++ L+ P S ++
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLE 690
Query: 179 GYC----KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
K +++ E++ K LVPN + Y GLC+ G+L DA + +
Sbjct: 691 ASATTCLKTQKIAESVE--NSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 235 GHRPPDLTPYNIILET-LCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
PD Y I++ ++KA + + + + PN+ +YN LI G CK G VD
Sbjct: 749 DRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNG 350
A + + + I ++ T+ LI+ K +A+ L ++ K L+ G K G
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL----KEKMIEKGLVRGSDKQG 864
Query: 351 MEEVAQRVSQLYGACDPDVAL 371
++ + V DP+V L
Sbjct: 865 DVDIPKEV-----VLDPEVKL 880
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 12/276 (4%)
Query: 86 WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
W E+ + E S F++I+ ++GL+ A V M G P ++S L+
Sbjct: 141 WGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPN 204
K + A ++D MI + PDV++ +I++ YC+ VD+AM ++ + L N
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIF 263
VTY L +G G + L M RG ++ Y +++ C++ L ++A +F
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERG-VSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 264 NSLIPEPNVQS---YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
L + V Y +L+ GYC+ G++ +A+ ++ NM + ++ LIN +CK
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 321 KQCDKAIALYK--NNRDLCP----FKILMDGLRKNG 350
Q +A ++ N+ L P + L+DG + G
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 11/305 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G +S +A++ E+ + VKP V + T+IHGLCKD V +A K+ +M
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEM-VKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 62 IQ-RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
++ G+ P V ++SLI C + L +E +D ++ ++ +L K G
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
E + EM ++G +PD ++Y +L++G+C++ + A ++ D M+E GL PDV SYN+
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ + +I++ +EA L EDM + P+ ++Y+ +FDGLC + +A L M ++G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP--EPNVQSYNILISGYCKNGRVDEAM 292
++ P L+ LCE L+ +K+ +SL + ++++I CK + +++
Sbjct: 394 YK-PRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSI 452
Query: 293 SIYQN 297
+ N
Sbjct: 453 DLLLN 457
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+S L K+ G N + + E + + KP+ V YN +I+G C + A ++ E
Sbjct: 260 IYSTLISSLIKA-GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M+++G+ PDV++++ ++ F +W+E L + S D S+ I+ D LC+
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
EA + EM+ +G +P + C K++ K+ + G+ D +++
Sbjct: 379 FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSV 437
Query: 176 LIQGYCKIERVDEAMNL 192
+I CK + ++++L
Sbjct: 438 MIPTMCKEPVISDSIDL 454
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 160/328 (48%), Gaps = 39/328 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ GLC+S G+ Q L+E QL+ P+++ Y T++ G K+G ++ A ++ EM
Sbjct: 412 YNTLIDGLCES-GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Query: 62 IQRGIFPDVVTFSSLIYGFCH-ADQWKEVRL-----LLNENSLDVCSFNIIMDALCKQGL 115
+++GI PD +++ G D K RL + ++ D+ +N+ +D LCK G
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L++A ++ + G+ PD ++YT ++ GY + AR L+D M+ L P V +Y +
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G+ K R+++A +M + + PN +T+ L G+C+ G + +A+ +L +M G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIY 295
IP PN SY +LIS C + +E + +Y
Sbjct: 651 -------------------------------IP-PNKYSYTMLISKNCDFEKWEEVVKLY 678
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ M + I D T + L K +
Sbjct: 679 KEMLDKEIEPDGYTHRALFKHLEKDHES 706
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 21/335 (6%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
+N +I G CK GL + A + EM+ GI+P T++ I C + + R LL+ +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 98 L-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
DV S+N +M K G +EA + ++ + P +++Y L+DG C ++ A++
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
L + M + PDV +Y L++G+ K + A + ++ML K + P+ Y G
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 217 RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-----QHLDKANKIFN-SLIPEP 270
R G A+ M H PDLT YN+ ++ LC+ + ++ KIF L+P+
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+Y +I GY +NG+ A ++Y M + + T+ +LI K + ++A
Sbjct: 551 --VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 331 KNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGAC 365
+ G+R N M A LYG C
Sbjct: 609 TEMKK--------RGVRPNVMTHNA----LLYGMC 631
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 146/327 (44%), Gaps = 47/327 (14%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL 98
N V+ L ++NKA + MI+ GI P V+T
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT-------------------------- 240
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
FN ++D+ K G L + EM +R ++ ++Y IL++G+ K+++AR+
Sbjct: 241 ----FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
M +G +S+N LI+GYCK D+A + ++ML + P TY LC F
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQS 274
GR+ DA L+ M PD+ YN ++ + +A+ +F+ L P++ +
Sbjct: 357 GRIDDARELLSSM-----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR 334
YN LI G C++G ++ A + + M + I D T+ L+ F K A +Y
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD--- 468
Query: 335 DLCPFKILMDGLRKNGMEEVAQRVSQL 361
++L G++ +G + V +L
Sbjct: 469 -----EMLRKGIKPDGYAYTTRAVGEL 490
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 144/332 (43%), Gaps = 48/332 (14%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P ++ +NT++ K G + + K+ EM +R I VT++ LI GF + +E R
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 91 LL---LNENSLDVC--SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ + V SFN +++ CKQGL +A V EM+ G+ P +Y I +
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C ++D AR+L M PDV SYN L+ GY K+ + EA L +D+ ++ P+
Sbjct: 354 CDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI 409
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
VTY L DGLC G L A M IF
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEM--------------------------TTQLIF-- 441
Query: 266 LIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
P+V +Y L+ G+ KNG + A +Y M + I D + + DK
Sbjct: 442 ----PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 326 AIALYK-------NNRDLCPFKILMDGLRKNG 350
A L++ + DL + + +DGL K G
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 74/323 (22%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG----------------- 144
+F +++ L + L+ EA+ V I G+ +L+DG
Sbjct: 121 AFAAMLEILAENDLMSEAYLVAERSIDLGMHE---IDDLLIDGSFDKLIALKLLDLLLWV 177
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP- 203
Y K +K F+ MI G +P V + NI+++ +++A + E M+ ++P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 204 ----------------------------------NAVTYKYLFDGLCRFGRLPDAWNFLT 229
+ VTY L +G + G++ +A F
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 230 RMHYRGHRPPDLTPY--NIILETLCEQHL-DKANKIFNSLIPE---PNVQSYNILISGYC 283
M G +TPY N ++E C+Q L D A + + ++ P +YNI I C
Sbjct: 298 DMRRSGFA---VTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 284 KNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR--DLCP--- 338
GR+D+A + +M ++V ++ L++ + K + +A L+ + R D+ P
Sbjct: 355 DFGRIDDARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 339 -FKILMDGLRKNGMEEVAQRVSQ 360
+ L+DGL ++G E AQR+ +
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKE 433
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 179/360 (49%), Gaps = 18/360 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ GLC+ + +A+ L+ E + + P++V +N+++ G CK G V+ A+ +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSE-WKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLL---LNENSL--DVCSFNIIMDALCKQGLL 116
++ G+ P V + + LI G C E L +N++ + D ++NI+ G++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL-VPDVWSYNI 175
A V +M+ +G+ PDVI+YTIL+ G C +D L M+ G + + ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
++ G CK R+DEA++L M L P+ V Y + GLC+ G+ A M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 236 HRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEA 291
P T + +L LC++ L +A + +SLI ++ YNI+I GY K+G ++EA
Sbjct: 429 ILPNSRT-HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA------IALYKNNRDLCPFKILMDG 345
+ +++ + I TF LI +CK + +A I LY + + LMD
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 179/327 (54%), Gaps = 14/327 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++MSG CK A + LV P++ +N +I+GLC G + +A +L S+M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDM 283
Query: 62 IQRGIFPDVVTFSSLIYGFCH-----ADQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGL 115
+ G+ PD VT++ L GF H + W+ +R +L++ S DV ++ I++ C+ G
Sbjct: 284 NKHGVEPDSVTYNILAKGF-HLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 116 LLEAHAVCYEMIKRGVQPD-VISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ + +M+ RG + + +I ++++ G C ++D+A LF+ M GL PD+ +Y+
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
I+I G CK+ + D A+ L ++M K ++PN+ T+ L GLC+ G L +A + L +
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 235 GHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDE 290
G D+ YNI+++ + +++A ++F +I P+V ++N LI GYCK + E
Sbjct: 463 G-ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAF 317
A I + L + ++ L++A+
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 15/299 (5%)
Query: 72 TFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEM 126
T+S+++ G C + ++ L L + V SFN IM CK G + A + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
+K G+ P V S+ IL++G CL + +A +L M + G+ PD +YNIL +G+ + +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
A + DML K L P+ +TY L G C+ G + L M RG + P ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 247 ILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+L LC+ +D+A +FN + + P++ +Y+I+I G CK G+ D A+ +Y MC +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
I+ +S T L+ C++ +A +L + D+ + I++DG K+G E A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 161/357 (45%), Gaps = 52/357 (14%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
++SGLCK+ A+ +++A L P+LV Y+ VIHGLCK G + A L EM
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGL-SPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAV 122
+ I P+ T +L+ G LC++G+LLEA ++
Sbjct: 426 DKRILPNSRTHGALLLG------------------------------LCQKGMLLEARSL 455
Query: 123 CYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK 182
+I G D++ Y I++DGY +++A +LF ++IE G+ P V ++N LI GYCK
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
+ + EA + + + L P+ V+Y L D G M G P ++T
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 243 PYNIILETLC-------------EQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNG 286
Y++I + LC E+ +K + + E P+ +YN +I C+
Sbjct: 576 -YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK----RKQCDKAIALYKNNRDLCPF 339
+ A + M RN+ S T+ +LI++ C RK +L + N L F
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 63/386 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNL--VIYNTVIHGLCKDGLVNKAQKLCS 59
+G L+ GLC+ G ++ L++L L V+YN VI G K G + +A +L
Sbjct: 436 HGALLLGLCQK---GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQG 114
+I+ GI P V TF+SLIYG+C E R +L+ L V S+ +MDA G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK------------VDKARKLFDMMI 162
+ EM G+ P ++Y+++ G C K +K ++ M
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
G+ PD +YN +IQ C+++ + A E M ++NL ++ TY L D LC +G +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGY 282
A +F+ L N+ L +Y LI +
Sbjct: 673 KADSFIY----------SLQEQNVSLSKF----------------------AYTTLIKAH 700
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK-------QCDKAIALYKNNRD 335
C G + A+ ++ + R + +IN C+R Q + L N R
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLISNERS 760
Query: 336 LCPFKILMDGLRKN--GMEEVAQRVS 359
IL R++ +E+++ V+
Sbjct: 761 FVYCPILSANCRRHTLSVEKLSHEVT 786
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
VD + + M + L SYN ++ + + +++ + +D N TY
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYST 192
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP- 268
+ DGLCR +L DA FL ++ P + +N I+ C+ +D A F +++
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKC 251
Query: 269 --EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
P+V S+NILI+G C G + EA+ + +M + DS T+ +L F
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 189/421 (44%), Gaps = 86/421 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ GL +++ A + + + +KP++++Y +I GL K G + A KL S M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLK-KNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLL 116
+GI PD ++++I C +E R L E+ D C+ I++ ++C+ GL+
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL------------------- 157
EA + E+ K G P V ++ L+DG C ++ +AR L
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 158 ----FDMMIEAGLV----------------PDVWSYNILIQGYCKIERVDEAMNLCEDML 197
FD M+E+G + PD+ SYN+LI G+C+ +D A+ L +
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWN-FLTRMHYRGHRPP--------------DLT 242
K L P++VTY L +GL R GR +A+ F + +R H P L
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFR-HSPAVYRSLMTWSCRKRKVLV 603
Query: 243 PYNIILETLCEQHL---DKANKI------------------FNSLIPEPNVQSYNILISG 281
+N+ ++ L + + AN+I ++ E + Y I + G
Sbjct: 604 AFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIG 663
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY----KNNRDLC 337
C++GR EA+ ++ + + I+ + LI+ CKR+Q D AI ++ NN L
Sbjct: 664 LCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLM 723
Query: 338 P 338
P
Sbjct: 724 P 724
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 178/386 (46%), Gaps = 56/386 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G LM GL K + +A + ++ + + PN V Y +I GLC+ G + A+KL EM
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTG-RGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLL 116
G +PD V ++L+ GFC + E LL + L + ++ ++D L +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + M+K+ ++PD+I YTIL+ G K++ A KL M G+ PD + YN +
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 177 IQGYCKIERVDEAMNL-------------------------------CEDMLTK----NL 201
I+ C ++E +L E++ T+
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL---------TPYNIILE--T 250
P+ T+ L DGLC+ G L +A L +M RP L ++ ++E +
Sbjct: 440 SPSVATFNALIDGLCKSGELKEARLLLHKMEV--GRPASLFLRLSHSGNRSFDTMVESGS 497
Query: 251 LCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+ + + D A+ F P++ SYN+LI+G+C+ G +D A+ + + L+ + DS T+
Sbjct: 498 ILKAYRDLAH--FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 311 KLLINAFCKRKQCDKAIALYKNNRDL 336
LIN + + ++A L+ D
Sbjct: 556 NTLINGLHRVGREEEAFKLFYAKDDF 581
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PNL + ++ GL K G + AQK+ +M RGI P+ VT++ LI G
Sbjct: 196 PNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG------------- 242
Query: 93 LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
LC++G +A + YEM G PD +++ L+DG+C ++
Sbjct: 243 -----------------LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMV 285
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
+A +L + + G V + Y+ LI G + R +A L +ML KN+ P+ + Y L
Sbjct: 286 EAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE--- 269
GL + G++ DA L+ M +G PD YN +++ LC + L + + + E
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSKGI-SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 270 -PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
P+ ++ ILI C+NG V EA I+ + TF LI+ CK + +A
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 53/324 (16%)
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYT----------------- 139
S+D F +++ A K G+ +A M + +PDV +Y
Sbjct: 124 SVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAF 183
Query: 140 -------------------ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
ILMDG K + A+K+FD M G+ P+ +Y ILI G
Sbjct: 184 AVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGL 243
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
C+ D+A L +M T P++V + L DG C+ GR+ +A+ L R+ +
Sbjct: 244 CQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL-RLFEKDGFVLG 302
Query: 241 LTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
L Y+ +++ L + +A +++ +++ +P++ Y ILI G K G++++A+ +
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL------YKNNRDLCPFKILMDGLRKNG 350
+M + I D+ + +I A C R ++ +L ++ D C IL+ + +NG
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Query: 351 M----EEVAQRVSQLYGACDPDVA 370
+ EE+ + + C P VA
Sbjct: 423 LVREAEEIFTEIEK--SGCSPSVA 444
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
E+ GV D + +L+ Y +KA + F M E PDV++YN++++ + E
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176
Query: 185 RVDE-AMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
A + +ML N PN T+ L DGL + GR DA M RG P +T
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVT- 235
Query: 244 YNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMC 299
Y I++ LC++ D A K+F + P+ ++N L+ G+CK GR+ EA + +
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 300 LRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEE 353
V + LI+ + ++ +A LY N D+ + IL+ GL K G E
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 354 VAQRV 358
A ++
Sbjct: 356 DALKL 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 39/215 (18%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-RL 91
P++V YN +I+G C+ G ++ A KL + + +G+ PD VT+++LI G + +E +L
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Query: 92 LLNENSLD-------------------VCSFNIIMDAL-----------------CKQGL 115
++ + +FN+ M L K+G
Sbjct: 575 FYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGE 634
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
A E+ R + + YTI + G C + +A +F ++ E ++ S
Sbjct: 635 TERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVK 694
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKN--LVPNAVTY 208
LI G CK E++D A+ + L N L+P Y
Sbjct: 695 LIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY 729
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 174/343 (50%), Gaps = 17/343 (4%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQ-----LVKPNLVIYNTVIHGLCKDGLVNKAQKL 57
G L++ LCKS+ A++ +++ + ++K + + +NT+I GLCK G + +A++L
Sbjct: 333 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 58 CSEM-IQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALC 111
M ++ P+ VT++ LI G+C A + KEV + E+ + +V + N I+ +C
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
+ L A +M K GV+ +V++Y L+ C V+KA ++ M+EAG PD
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
Y LI G C++ R +A+ + E + + + Y L C + LT M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 232 HYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G +P +T YN ++ + + + ++ + +P V +Y +I YC G
Sbjct: 573 EKEGKKPDSIT-YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 288 VDEAMSIYQNMCLRNIVR-DSETFKLLINAFCKRKQCDKAIAL 329
+DEA+ ++++M L + V ++ + +LINAF K +A++L
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 166/347 (47%), Gaps = 32/347 (9%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG--------IFPDVVTFSSLIYGFCH 82
++P++V +I+ LCK V++A ++ +M RG I D + F++LI G C
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 83 ADQWKE-----VRLLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVI 136
+ KE VR+ L E + + ++N ++D C+ G L A V M + ++P+V+
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 137 SYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
+ ++ G C ++ A F M + G+ +V +Y LI C + V++AM E M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 197 LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL 256
L P+A Y L GLC+ R DA + ++ G DL YN+++ C++
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLIGLFCDK-- 559
Query: 257 DKANKIFNSLI------PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+ A K++ L +P+ +YN LIS + K+ + + + M + T+
Sbjct: 560 NNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTY 619
Query: 311 KLLINAFCKRKQCDKAIALYKN-------NRDLCPFKILMDGLRKNG 350
+I+A+C + D+A+ L+K+ N + + IL++ K G
Sbjct: 620 GAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 35/343 (10%)
Query: 16 GNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR-GIFP-DVVTF 73
G Q++ E L N + N V+ L ++GLV+ A K+ EM+Q+ +FP + +T
Sbjct: 166 GMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITA 225
Query: 74 SSLIYGFCHADQWKEVRLLLNENSLDVCS-------------FNIIMDALCKQGLLLEAH 120
+++ + WKE RLL E + + S + +LCK A
Sbjct: 226 DIVLH-----EVWKE-RLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKAR--KLFDMMIEAGLVPDVWSYNILIQ 178
+ +++K + + L+ CL +D +R L M E + PDV + ILI
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 179 GYCKIERVDEAMNLCEDMLTKN------LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
CK RVDEA+ + E M K + +++ + L DGLC+ GRL +A L RM
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 233 YRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRV 288
P+ YN +++ C L+ A ++ + + + PNV + N ++ G C++ +
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ A+ + +M + + T+ LI+A C +KA+ Y+
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 162/379 (42%), Gaps = 39/379 (10%)
Query: 5 LMSGLCKSKGSGNAIQTLQEL--EALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
+S LCK+ + A L +L L P +N ++ L ++ +++ L +M
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPP---FNALLSCLGRNMDISRMNDLVLKMD 321
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLL-----------NENSLDVCSFNIIMDALC 111
+ I PDVVT LI C + + E + N D FN ++D LC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 112 KQGLLLEAHAVCYEM-IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
K G L EA + M ++ P+ ++Y L+DGYC K++ A+++ M E + P+V
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
+ N ++ G C+ ++ A+ DM + + N VTY L C + A + +
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEK 501
Query: 231 MHYRGHRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIP---EPNVQSYNILISGYCKNG 286
M G PD Y ++ LC+ D A ++ L ++ +YN+LI +C
Sbjct: 502 MLEAGC-SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGL 346
++ + +M DS T+ LI+ F K K D + +M+ +
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK-------------DFESVERMMEQM 607
Query: 347 RKNGMEEVAQRVSQLYGAC 365
R++G++ YGA
Sbjct: 608 REDGLDPTV----TTYGAV 622
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+SGLC+ + +AI+ +++L+ +L+ YN +I C K ++ ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSLD--VCSFNIIMDALCKQGL 115
M + G PD +T+++LI F ++ V ++ E+ LD V ++ ++DA C G
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 116 LLEAHAVCYEM-IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
L EA + +M + V P+ + Y IL++ + +A L + M + P+V +YN
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 175 ILIQ 178
L +
Sbjct: 692 ALFK 695
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ C + + L ++E + KP+ + YNT+I K +++ +M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEK-EGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL------DVCSFNIIMDALCKQGL 115
+ G+ P V T+ ++I +C + E L + L + +NI+++A K G
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
+A ++ EM + V+P+V +Y L K + + KL D M+E
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 174/343 (50%), Gaps = 17/343 (4%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQ-----LVKPNLVIYNTVIHGLCKDGLVNKAQKL 57
G L++ LCKS+ A++ +++ + ++K + + +NT+I GLCK G + +A++L
Sbjct: 333 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 58 CSEM-IQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALC 111
M ++ P+ VT++ LI G+C A + KEV + E+ + +V + N I+ +C
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
+ L A +M K GV+ +V++Y L+ C V+KA ++ M+EAG PD
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
Y LI G C++ R +A+ + E + + + Y L C + LT M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 232 HYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G +P +T YN ++ + + + ++ + +P V +Y +I YC G
Sbjct: 573 EKEGKKPDSIT-YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 288 VDEAMSIYQNMCLRNIVR-DSETFKLLINAFCKRKQCDKAIAL 329
+DEA+ ++++M L + V ++ + +LINAF K +A++L
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 152/325 (46%), Gaps = 35/325 (10%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR-GIFP-DVVTFSSLIYGFCHADQWKEVRL 91
N + N V+ L ++GLV+ A K+ EM+Q+ +FP + +T +++ + WKE RL
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH-----EVWKE-RL 237
Query: 92 LLNENSLDVCS-------------FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISY 138
L E + + S + +LCK A + +++K + +
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPF 297
Query: 139 TILMDGYCLKCKVDKAR--KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
L+ CL +D +R L M E + PDV + ILI CK RVDEA+ + E M
Sbjct: 298 NALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM 355
Query: 197 LTKN------LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET 250
K + +++ + L DGLC+ GRL +A L RM P+ YN +++
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG 415
Query: 251 LCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRD 306
C L+ A ++ + + + PNV + N ++ G C++ ++ A+ + +M + +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 307 SETFKLLINAFCKRKQCDKAIALYK 331
T+ LI+A C +KA+ Y+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYE 500
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 113/222 (50%), Gaps = 7/222 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+SGLC+ + +AI+ +++L+ +L+ YN +I C K ++ ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSLD--VCSFNIIMDALCKQGL 115
M + G PD +T+++LI F ++ V ++ E+ LD V ++ ++DA C G
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 116 LLEAHAVCYEM-IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
L EA + +M + V P+ + Y IL++ + +A L + M + P+V +YN
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
L + + + + + L ++M+ ++ PN +T + L + L
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 18/335 (5%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P+ +N+V+ +CK G V A+ + M + G PDV++++SLI G C + L+
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 93 LNENSL--------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
L D+ SFN + + K +L E M+K P+V++Y+ +D
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDT 172
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
+C ++ A K F M L P+V ++ LI GYCK ++ A++L ++M + N
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFN 264
VTY L DG C+ G + A +RM P L II D A K
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 265 SLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
++ + ++ +Y ++ISG C NG++ EA I ++M ++V D F ++NA+ K
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 322 QCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
+ A+ +Y D+ ++DG+ KNG
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 168/360 (46%), Gaps = 21/360 (5%)
Query: 28 LQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ-- 85
L+ PN+V Y+T I CK G + A K M + + P+VVTF+ LI G+C A
Sbjct: 156 LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 215
Query: 86 -----WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
+KE+R + SL+V ++ ++D CK+G + A + M++ V+P+ + YT
Sbjct: 216 VAVSLYKEMRRV--RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
++DG+ + D A K M+ G+ D+ +Y ++I G C ++ EA + EDM +
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKA 259
LVP+ V + + + + GR+ A N ++ RG PD+ + +++ + + L +A
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE-PDVVALSTMIDGIAKNGQLHEA 392
Query: 260 NKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
F I + N Y +LI CK G E ++ + +V D + I CK
Sbjct: 393 IVYF--CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 320 RKQCDKAIALYKNN------RDLCPFKILMDGLRKNGMEEVAQRV--SQLYGACDPDVAL 371
+ A L DL + L+ GL G+ A++V L PD A+
Sbjct: 451 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAV 510
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 171/347 (49%), Gaps = 21/347 (6%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIF---PDVVTFSSLIYGFCHADQWKE 88
+P+++ YN++I G C++G + A + + F PD+V+F+SL GF E
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 89 V----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
V ++L S +V +++ +D CK G L A + M + + P+V+++T L+DG
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
YC ++ A L+ M + +V +Y LI G+CK + A + M+ + PN
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIF 263
++ Y + DG + G +A FL +M +G R D+T Y +I+ LC L +A +I
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR-LDITAYGVIISGLCGNGKLKEATEIV 326
Query: 264 NSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ P++ + +++ Y K+GR+ A+++Y + R D +I+ K
Sbjct: 327 EDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Query: 321 KQCDKAIALY---KNNRDLCPFKILMDGLRKNG----MEEVAQRVSQ 360
Q +AI + K N + + +L+D L K G +E + ++S+
Sbjct: 387 GQLHEAIVYFCIEKANDVM--YTVLIDALCKEGDFIEVERLFSKISE 431
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 119/234 (50%), Gaps = 1/234 (0%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG ++SGLC + A + ++++E LV P++VI+ T+++ K G + A + ++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLV-PDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
I+RG PDVV S++I G Q E + + + +++DALCK+G +E
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVER 424
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
+ ++ + G+ PD YT + G C + + A KL M++ GL+ D+ +Y LI G
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+ EA + ++ML + P++ + L + G + A + L M RG
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 17/290 (5%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
SFN ++ +CK G + A + + M + G +PDVISY L+DG+C + A + + +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 162 IEA-GLV--PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ G + PD+ S+N L G+ K++ +DE ML K PN VTY D C+
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKS 176
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQS 274
G L A M R P++ + +++ C+ L+ A ++ + NV +
Sbjct: 177 GELQLALKSFHSMK-RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN-- 332
Y LI G+CK G + A +Y M + +S + +I+ F +R D A+
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 333 ----NRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACD--PDVALVRNQL 376
D+ + +++ GL NG + A + + D PD+ + +
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 9/213 (4%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
++ RG P S+ ++ C +V A + M G PDV SYN LI G+C+
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 186 VDEAMNLCEDMLTKNLV---PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
+ A + E + + P+ V++ LF+G + L + + ++ M P++
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM--LKCCSPNVV 164
Query: 243 PYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNM 298
Y+ ++T C+ L A K F+S+ + PNV ++ LI GYCK G ++ A+S+Y+ M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ + T+ LI+ FCK+ + +A +Y
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
K ++ G P S+N ++ CK+ +V A ++ M P+ ++Y L DG
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 216 CRFGRLPDAWNFLT--RMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP--EP 270
CR G + A L R + PD+ +N + + + LD+ ++ P
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP 161
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
NV +Y+ I +CK+G + A+ + +M + + TF LI+ +CK + A++LY
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 331 KNNR------DLCPFKILMDGLRKNGMEEVAQRVSQLY 362
K R ++ + L+DG K G QR ++Y
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGE---MQRAEEMY 256
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH----ADQWK 87
K N V+Y +I LCK+G + ++L S++ + G+ PD ++S I G C D +K
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 88 -EVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ R++ LD+ ++ ++ L +GL++EA V EM+ G+ PD + +L+ Y
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 147 LKCKVDKARKLFDMMIEAGLVPDV 170
+ + A L M GLV V
Sbjct: 520 KEGNMAAASDLLLDMQRRGLVTAV 543
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 174/343 (50%), Gaps = 17/343 (4%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQ-----LVKPNLVIYNTVIHGLCKDGLVNKAQKL 57
G L++ LCKS+ A++ +++ + ++K + + +NT+I GLCK G + +A++L
Sbjct: 333 GILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 58 CSEM-IQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALC 111
M ++ P+ VT++ LI G+C A + KEV + E+ + +V + N I+ +C
Sbjct: 393 LVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
+ L A +M K GV+ +V++Y L+ C V+KA ++ M+EAG PD
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
Y LI G C++ R +A+ + E + + + Y L C + LT M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 232 HYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G +P +T YN ++ + + + ++ + +P V +Y +I YC G
Sbjct: 573 EKEGKKPDSIT-YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 288 VDEAMSIYQNMCLRNIVR-DSETFKLLINAFCKRKQCDKAIAL 329
+DEA+ ++++M L + V ++ + +LINAF K +A++L
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 35/325 (10%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR-GIFP-DVVTFSSLIYGFCHADQWKEVRL 91
N + N V+ L ++GLV+ A K+ EM+Q+ +FP + +T +++ + WK RL
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH-----EVWKG-RL 237
Query: 92 LLNENSLDVCS-------------FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISY 138
L E + + S + +LCK A + +++K + +
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPF 297
Query: 139 TILMDGYCLKCKVDKAR--KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
L+ CL +D +R L M E + PDV + ILI CK RVDEA+ + E M
Sbjct: 298 NALLS--CLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM 355
Query: 197 LTKN------LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET 250
K + +++ + L DGLC+ GRL +A L RM P+ YN +++
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDG 415
Query: 251 LCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRD 306
C L+ A ++ + + + PNV + N ++ G C++ ++ A+ + +M + +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 307 SETFKLLINAFCKRKQCDKAIALYK 331
T+ LI+A C +KA+ Y+
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYE 500
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 113/222 (50%), Gaps = 7/222 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+SGLC+ + +AI+ +++L+ +L+ YN +I C K ++ ++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSLD--VCSFNIIMDALCKQGL 115
M + G PD +T+++LI F ++ V ++ E+ LD V ++ ++DA C G
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGE 631
Query: 116 LLEAHAVCYEM-IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
L EA + +M + V P+ + Y IL++ + +A L + M + P+V +YN
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
L + + + + + L ++M+ ++ PN +T + L + L
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 15/332 (4%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ LCK +A + L E+ ++ LV PNLV Y T++ G G + A+++ EM+ R
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLV-PNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLLLEA 119
G +PD T++ L+ G+C ++ E ++ NE + ++ +++ ALCK+ EA
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ EM++R PD ++D C KVD+A L+ M++ +PD + LI
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
CK RV EA L D K +P+ +TY L G+C G L +A M+ R +P
Sbjct: 376 LCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPN 434
Query: 240 DLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIY 295
T YN+++E L + ++ + ++ ++ PN ++ IL G K G+ ++AM I
Sbjct: 435 AFT-YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
+M + N D E+++L + F + DK +
Sbjct: 494 -SMAVMNGKVDKESWELFLKKFA--GELDKGV 522
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 152/308 (49%), Gaps = 11/308 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ PN+ N ++ LCK + A K+ E+ G+ P++VT+++++ G+ + +
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+L E D ++ ++MD CK G EA V +M K ++P+ ++Y +++
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + K +AR +FD M+E +PD +I C+ +VDEA L ML N +P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFN 264
L LC+ GR+ +A +G P LT YN ++ +CE+ L +A ++++
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLT-YNTLIAGMCEKGELTEAGRLWD 424
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+ +PN +YN+LI G KNG V E + + + M + TF +L K
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Query: 322 QCDKAIAL 329
+ + A+ +
Sbjct: 485 KEEDAMKI 492
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 43/306 (14%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
++ + N+++ ALCK+ + A+ V E+ G+ P++++YT ++ GY + ++ A+++
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ M++ G PD +Y +L+ GYCK+ R EA + +DM + PN VTY + LC+
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 219 GRLPDAWNFLTRMHYRGHRP----------------------------------PDLTPY 244
+ +A N M R P PD
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 245 NIILETLC-EQHLDKANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+ ++ LC E + +A K+F+ P++ +YN LI+G C+ G + EA ++ +M R
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDL------CPFKILMDGLRKNGMEEVA 355
++ T+ +LI K + + + + ++ F IL +GL+K G EE A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 356 QRVSQL 361
++ +
Sbjct: 490 MKIVSM 495
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 7/233 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y LM G CK A + ++E + ++PN V Y +I LCK+ +A+ + EM
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNE-IEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV----RLLLNENSL-DVCSFNIIMDALCKQGLL 116
++R PD +I C + E R +L N + D + ++ LCK+G +
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + ++ ++G P +++Y L+ G C K ++ +A +L+D M E P+ ++YN+L
Sbjct: 383 TEARKL-FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT 229
I+G K V E + + E+ML PN T+ LF+GL + G+ DA ++
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 6/236 (2%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLF 158
V S N +++ L + HA+ + G+ P++ + +L+ C K ++ A K+
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
D + GLVP++ +Y ++ GY ++ A + E+ML + P+A TY L DG C+
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPEPNVQSYNI 277
GR +A + M P ++T Y +++ LC E+ +A +F+ ++ + ++
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVT-YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 278 ---LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+I C++ +VDEA +++ M N + D+ LI+ CK + +A L+
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 189/371 (50%), Gaps = 24/371 (6%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
++SG CK A+ + ++ PNLV Y T++ LC+ G V++ + L +
Sbjct: 176 AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLED 235
Query: 64 RGIFPDVVTFSSLIYGFCHA----DQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGLLLE 118
G D V +S+ I+G+ D + R ++ + + DV S++I++D L K+G + E
Sbjct: 236 EGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEE 295
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + +MIK GV+P++I+YT ++ G C K+++A LF+ ++ G+ D + Y LI
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G C+ ++ A ++ DM + + P+ +TY + +GLC GR+ +A +
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV------V 409
Query: 239 PDLTPYNIILETLCE-QHLDKA----NKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMS 293
D+ Y+ +L++ + Q++D + + IP V NIL+ + G EA +
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC-NILLKAFLLMGAYGEADA 468
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD------LCPFKILMDGLR 347
+Y+ M ++ D+ T+ +I +CK Q ++A+ ++ R +C +I+ D L
Sbjct: 469 LYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRII-DALC 527
Query: 348 KNGMEEVAQRV 358
K GM + A V
Sbjct: 528 KKGMLDTATEV 538
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 199/402 (49%), Gaps = 45/402 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ G CK+ A++ EL + V YN +I LCK G+++ A ++ E+
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNELRKSSVSAA--VCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL----NENSLDVCSFNIIMDA---LCKQG 114
++G++ D+ T +L++ HA+ + L L + + DVC ++ DA LCK+G
Sbjct: 543 WEKGLYLDIHTSRTLLHSI-HANGGDKGILGLVYGLEQLNSDVC-LGMLNDAILLLCKRG 600
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL--FDMMIEAGLVP---- 168
A V M ++G+ T+ LK VD R L + +++ AG
Sbjct: 601 SFEAAIEVYMIMRRKGL-------TVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSM 653
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
DV Y I+I G CK + +A+NLC ++ + N +TY L +GLC+ G L +A
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLD-KANKIFNSLIPE---PNVQSYNILISGYCK 284
+ G P ++T Y I+++ LC++ L A K+ +S++ + PN+ YN ++ GYCK
Sbjct: 714 DSLENIGLVPSEVT-YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY-----KN-NRDLCP 338
G+ ++AM + + + D+ T +I +CK+ ++A++++ KN + D
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 339 FKILMDGL-RKNGMEE---------VAQRVSQLYGACDPDVA 370
F L+ G K MEE V++ V +L D ++A
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELA 874
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 62/363 (17%)
Query: 33 PNLVIYNTVIHG--LCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA---DQWK 87
P + +++IHG + +D L + G FP +TF SLIY F D
Sbjct: 95 PRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAI 154
Query: 88 EVRLLLNENSLD------VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGV-QPDVISYTI 140
EV ++ +++ VCS ++ CK G A + GV P++++YT
Sbjct: 155 EVLEMMTNKNVNYPFDNFVCS--AVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTT 212
Query: 141 LMDGYCLKCKVDKARKL----------FD-------------------------MMIEAG 165
L+ C KVD+ R L FD M+E G
Sbjct: 213 LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKG 272
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
+ DV SY+ILI G K V+EA+ L M+ + + PN +TY + GLC+ G+L +A+
Sbjct: 273 MNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAF 332
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISG 281
R+ G + Y +++ +C + +L++A + + +P++ +YN +I+G
Sbjct: 333 VLFNRILSVGIEVDEFL-YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKI 341
C GRV EA + + +V D T+ L++++ K + D A+ + R KI
Sbjct: 392 LCMAGRVSEADEVS-----KGVVGDVITYSTLLDSYIKVQNID---AVLEIRRRFLEAKI 443
Query: 342 LMD 344
MD
Sbjct: 444 PMD 446
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 36/296 (12%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
YN ++ L + GLV + ++L +EM++ + PD+ TF++L+ G+
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGY----------------- 165
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
CK G ++EA +I+ G PD +YT + G+C + +VD A K+
Sbjct: 166 -------------CKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
F M + G + SY LI G + +++DEA++L M N PN TY L D LC
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQ 273
G+ +A N +M G +P D Y +++++ C LD+A+ + ++ PNV
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCM-YTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVI 331
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
+YN LI G+CK V +AM + M +N+V D T+ LI C D A L
Sbjct: 332 TYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 11/244 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLV--KPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+ TL++G CK G ++ Q + L P+ Y + I G C+ V+ A K+
Sbjct: 158 FNTLVNGYCKL---GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC-----SFNIIMDALCKQG 114
EM Q G + V+++ LIYG A + E LL + D C ++ +++DALC G
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
EA + +M + G++PD YT+L+ +C +D+A L + M+E GL+P+V +YN
Sbjct: 275 QKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYN 334
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
LI+G+CK + V +AM L ML +NLVP+ +TY L G C G L A+ L+ M
Sbjct: 335 ALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Query: 235 GHRP 238
G P
Sbjct: 394 GLVP 397
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 7/211 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y + ++G C+ K A + +E+ N V Y +I+GL + +++A L +M
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQ-NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM 251
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGLL 116
P+V T++ LI C + Q E L + S D C + +++ + C L
Sbjct: 252 KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL 311
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + M++ G+ P+VI+Y L+ G+C K V KA L M+E LVPD+ +YN L
Sbjct: 312 DEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTL 370
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
I G C +D A L M LVPN T
Sbjct: 371 IAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 175/337 (51%), Gaps = 12/337 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G K+K NA + ++ A + N VIYNT+I+GLCK G +KA+++ +
Sbjct: 522 YSILIDGFFKNKDEQNAWDVINQMNASNF-EANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 62 IQRGIFP-DVVTFSSLIYGFCH---ADQWKEVRLLLNEN--SLDVCSFNIIMDALCKQGL 115
I+ + +++S+I GF D E ++EN S +V +F +++ CK
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ A + +EM ++ D+ +Y L+DG+C K + A LF + E GL+P+V YN
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI G+ + ++D A++L + M+ + + TY + DGL + G + A + + + G
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
P ++ + +++ L ++ KA+K+ + + PNV Y+ +I+G+ + G ++EA
Sbjct: 761 IVPDEIL-HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
++ M + IV D F LL++ ++ I+
Sbjct: 820 FRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKIS 856
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 15/366 (4%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
+L++G CK G A+ +E L P+ V+++ ++ CK+ + KA + M
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLA-PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN--SLDVCSF--NIIMDALCKQGLLLEA 119
I P V ++I G A+ + + N++ S F N I CKQG + A
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ M ++G++P+V+ Y +M +C +D AR +F M+E GL P+ ++Y+ILI G
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
+ K + A ++ M N N V Y + +GLC+ G+ A L +
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM 588
Query: 240 DLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIY 295
T YN I++ + D A + + + PNV ++ LI+G+CK+ R+D A+ +
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDL------CPFKILMDGLRKN 349
M + D + LI+ FCK+ A L+ +L + L+ G R
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 350 GMEEVA 355
G + A
Sbjct: 709 GKMDAA 714
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 184/425 (43%), Gaps = 57/425 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ + CK+ A+ L+E+ V + Y +VI K+G + +A ++ E
Sbjct: 276 LFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDE 335
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGL 115
M+ GI V+ +SL+ G+C ++ + L N E L D F+++++ CK
Sbjct: 336 MVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME 395
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDG------------------------------- 144
+ +A M + P + ++ G
Sbjct: 396 MEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKI 455
Query: 145 ---YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+C + KVD A MM + G+ P+V YN ++ +C+++ +D A ++ +ML K L
Sbjct: 456 FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKAN 260
PN TY L DG + +AW+ + +M+ ++ YN I+ LC+ KA
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI-YNTIINGLCKVGQTSKAK 574
Query: 261 KIFNSLIPEPNVQ----SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++ +LI E SYN +I G+ K G D A+ Y+ M + TF LIN
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 317 FCKRKQCDKAIALYKNNR------DLCPFKILMDGL-RKNGMEEVAQRVSQLYGACDPDV 369
FCK + D A+ + + DL + L+DG +KN M+ S+L P++
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-----PEL 689
Query: 370 ALVRN 374
L+ N
Sbjct: 690 GLMPN 694
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 164/342 (47%), Gaps = 14/342 (4%)
Query: 9 LCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP 68
CK +G +A + ++ + ++PN+V YN ++ C+ ++ A+ + SEM+++G+ P
Sbjct: 459 FCK-QGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 69 DVVTFSSLIYGFC----HADQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVC 123
+ T+S LI GF + W + + N + +N I++ LCK G +A +
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 124 YEMIK-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK 182
+IK + SY ++DG+ D A + + M E G P+V ++ LI G+CK
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
R+D A+ + +M + L + Y L DG C+ + A+ + + G P +++
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP-NVS 696
Query: 243 PYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNM 298
YN ++ +D A ++ ++ + ++ +Y +I G K+G ++ A +Y +
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP 338
IV D +L+N K+ Q KA + + +D+ P
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 170/400 (42%), Gaps = 52/400 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHG---------------- 44
M+ ++ CK+ AI+ +++++ + P+ V+ +T+I G
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVR-IAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Query: 45 ------------------LCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW 86
CK G V+ A M Q+GI P+VV +++++ C
Sbjct: 441 SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 87 KEVRLLLNE---NSLDVCSF--NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
R + +E L+ +F +I++D K A V +M + + + Y +
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 142 MDGYCLKCKVDKARKLFDMMI-EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
++G C + KA+++ +I E SYN +I G+ K+ D A+ +M
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKAN 260
PN VT+ L +G C+ R+ A M + DL Y +++ C+++ K
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKL-DLPAYGALIDGFCKKNDMKTA 679
Query: 261 KIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
S +PE PNV YN LISG+ G++D A+ +Y+ M I D T+ +I+
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 317 FCKRKQCDKAIALYKNNRDL--CPFKI----LMDGLRKNG 350
K + A LY DL P +I L++GL K G
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 160/369 (43%), Gaps = 67/369 (18%)
Query: 29 QLVKPNLV-----IYNT-VIHGLCKDGLVNK--------------AQKLCSEMIQRGIFP 68
LV+ NL+ IYN V+ G+ D + + A K+ ++ RG P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 69 DVVTFSSLIYGFCHA-------DQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
D + FS + C D +E+R L + ++I+ A K+G + EA
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV-AFVKEGNMEEAVR 331
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
V EM+ G+ VI+ T L++GYC ++ KA LF+ M E GL PD ++++++ +C
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFC 391
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG--------------------------- 214
K +++A+ M + + P++V + G
Sbjct: 392 KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFM 451
Query: 215 -------LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
C+ G++ A +FL M +G P++ YN ++ C +++D A IF+ +
Sbjct: 452 CNKIFLLFCKQGKVDAATSFLKMMEQKGIE-PNVVFYNNMMLAHCRMKNMDLARSIFSEM 510
Query: 267 IP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ EPN +Y+ILI G+ KN A + M N + + +IN CK Q
Sbjct: 511 LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQT 570
Query: 324 DKAIALYKN 332
KA + +N
Sbjct: 571 SKAKEMLQN 579
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 152/370 (41%), Gaps = 49/370 (13%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
+N +++ ++ ++ A M+ R + P V ++++ ++ E + + N+
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 98 L-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVI---------------- 136
L D + ++M A ++ EA + ++ RG +PD +
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 137 --------------------SYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+YT ++ + + +++A ++ D M+ G+ V + L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ GYCK + +A++L M + L P+ V + + + C+ + A F RM
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSY--NILISGYCKNGRVDEAMSI 294
P + + +I L + + A +IFN + N + +CK G+VD A S
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP----FKILMDGLRK 348
+ M + I + + ++ A C+ K D A +++ + L P + IL+DG K
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 349 NGMEEVAQRV 358
N E+ A V
Sbjct: 532 NKDEQNAWDV 541
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 180/388 (46%), Gaps = 51/388 (13%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYN--TVIHGLCKDGLVNKAQKLCSE 60
G ++ G C A + E+E + L +Y VI CK+ + +A +
Sbjct: 287 GMVVRGFCNEMKMKAAESVIIEMEEIGF---GLDVYACLAVIDRYCKNMNLPEALGFLDK 343
Query: 61 MIQRGIFPDVVTFSSLIYGFCHAD-------QWKEVRLLLNENSLDVCSFNIIMDALCKQ 113
M+ +G+ + V S ++ +C D ++KE R + LD +N+ DAL K
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM--NIFLDRVCYNVAFDALSKL 401
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G + EA + EM RG+ PDVI+YT L+DGYCL+ KV A L D MI G+ PD+ +Y
Sbjct: 402 GRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITY 461
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH- 232
N+L+ G + +E + + E M + PNAVT + +GLC ++ +A +F + +
Sbjct: 462 NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ 521
Query: 233 --------------------------YRGHRPPDLTPYNIILETLC-EQHLDKANKIFNS 265
R P + Y + +LC E +L+KA+ +
Sbjct: 522 KCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKK 581
Query: 266 LIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+ EP +I +CK V EA ++ M R ++ D T+ ++I+ +C+ +
Sbjct: 582 MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE 641
Query: 323 CDKAIALYKNNR------DLCPFKILMD 344
KA +L+++ + D+ + +L+D
Sbjct: 642 LQKAESLFEDMKQRGIKPDVVTYTVLLD 669
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 171/340 (50%), Gaps = 38/340 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+SGL ++ ++ + ++A + KPN V + +I GLC V +A+ S +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKA-EGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE-----VRLLLNENSLDVCSFNIIMDALCKQGLL 116
Q+ P+ +S + G+C A K+ VRL E L + + +LC +G L
Sbjct: 520 EQKC--PE--NKASFVKGYCEAGLSKKAYKAFVRL---EYPLRKSVYIKLFFSLCIEGYL 572
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+AH V +M V+P ++ +C V +A+ LFD M+E GL+PD+++Y I+
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL-PDAWNFLTRMHYRG 235
I YC++ + +A +L EDM + + P+ VTY L D R+ +L P+ + G
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD---RYLKLDPEHHETCSVQGEVG 689
Query: 236 HRPP--------------DLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNI 277
R D+ Y ++++ C+ +L++A ++F+ +I EP++ +Y
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 278 LISGYCKNGRVDEAMSIYQNMCLR-NIVRDSETFKLLINA 316
LIS Y + G +D A+++ + + NI SE+F+ + +
Sbjct: 750 LISSYFRKGYIDMAVTLVTELSKKYNI--PSESFEAAVKS 787
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 150/342 (43%), Gaps = 41/342 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ LC+ GN L+E L + ++ Y T I+GLC G KA L E+
Sbjct: 219 YAIVVKALCRK---GN----LEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
I R + D + V +++ C + + A +
Sbjct: 272 IDRK--------------YLAGDDLRAV-------------LGMVVRGFCNEMKMKAAES 304
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
V EM + G DV + ++D YC + +A D M+ GL + ++++Q YC
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC 364
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
K++ EA+ ++ N+ + V Y FD L + GR+ +A+ L M RG PD+
Sbjct: 365 KMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI-VPDV 423
Query: 242 TPYNIILETLCEQ-----HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQ 296
Y +++ C Q LD +++ + + P++ +YN+L+SG +NG +E + IY+
Sbjct: 424 INYTTLIDGYCLQGKVVDALDLIDEMIGNGMS-PDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCP 338
M ++ T ++I C ++ +A + + CP
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 138/348 (39%), Gaps = 38/348 (10%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI---QRGIFPDVVTFSSLIYGFCHADQWK 87
V PN+ Y T++ L GL K + E+I +RG T LI + K
Sbjct: 85 VSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGF-----TVMDLIEVIGEQAEEK 139
Query: 88 EVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ +L S ++ A G+ EA V ++ + D+ + LM+
Sbjct: 140 KRSFVLIRVS------GALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTE 193
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
K+ LF + + GL + ++Y I+++ C+ ++EA L L +N +
Sbjct: 194 FGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML----LIEN--ESVFG 247
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD--LTPYNIILETLCEQHLDKANKIFNS 265
YK +GLC G A + + R + D +++ C + KA + S
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE---S 304
Query: 266 LIPEPNVQSYNI-------LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+I E + + +I YCKN + EA+ M + + + L++ +C
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC 364
Query: 319 KRKQCDKAIALYKNNRDLCPF------KILMDGLRKNGMEEVAQRVSQ 360
K C +A+ +K RD+ F + D L K G E A + Q
Sbjct: 365 KMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 147/299 (49%), Gaps = 17/299 (5%)
Query: 33 PNLVIYNTVIHGLCK-DGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
P + N +I LC+ DG V+ K+ EM +RG PD T+ +LI G C + E +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L E + V ++ +++ LC + EA EM +G++P+V +Y+ LMDG C
Sbjct: 214 LFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ +A +LF+MM+ G P++ +Y LI G CK +++ EA+ L + M + L P+A
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET-------LCEQHLDKA 259
Y + G C + +A NFL M G P LT +NI ++T LC + +A
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLT-WNIHVKTSNEVVRGLCANYPSRA 392
Query: 260 NKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
++ S+ V++ L+ CK G +A+ + + + T+KLLI
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 117/222 (52%), Gaps = 14/222 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++GLC SK A++ L+E+++ + ++PN+ Y++++ GLCKDG +A +L M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKS-KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+ RG P++VT+++LI G C + +E LL+ +L D + ++ C
Sbjct: 289 MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKF 348
Query: 117 LEAHAVCYEMIKRGVQPDVISYTI-------LMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
EA EMI G+ P+ +++ I ++ G C +A L+ M G+ +
Sbjct: 349 REAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVE 407
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
V + L++ CK +A+ L ++++T +P+ T+K L
Sbjct: 408 VETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 18/190 (9%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQL--VKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
Y +LM GLCK G ++Q ++ E + +PN+V Y T+I GLCK+ + +A +L
Sbjct: 265 YSSLMDGLCKD---GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLD 321
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------------SLDVCSFNIIM 107
M +G+ PD + +I GFC +++E L+E ++ V + N ++
Sbjct: 322 RMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVV 381
Query: 108 DALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV 167
LC A + M RG+ +V + L+ C K + KA +L D ++ G +
Sbjct: 382 RGLCAN-YPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI 440
Query: 168 PDVWSYNILI 177
P ++ +LI
Sbjct: 441 PSKGTWKLLI 450
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 44/276 (15%)
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC--SFNIIMDALCKQGLL---LEA 119
G D +F ++ A+++K L+ ++ C S +I++ G + ++
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
V ++M P +Y ++ + +++ A K + M E GL P V S N+LI+
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 180 YCKIE-RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
C+ + VD + + +M + P++ TY L GLCRFGR+
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI----------------- 208
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
D+A K+F ++ + P V +Y LI+G C + VDEAM
Sbjct: 209 ------------------DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ M + I + T+ L++ CK + +A+ L++
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 169/337 (50%), Gaps = 12/337 (3%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L++ L K + + + +++ L +V N+ +YN ++H K G KA+KL SEM ++
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVV-ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEA 119
G+FPD+ T+++LI +C E R+ + + ++ ++N + ++G + EA
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ E IK V + ++YT L+DGYC +D+A +L ++M G P V +YN +++
Sbjct: 293 TRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
C+ R+ EA L +M K + P+ +T L + C+ + A +M G +
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLK-L 410
Query: 240 DLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
D+ Y ++ C+ L+ A + S+I + P +Y+ L+ G+ + DE +
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+ R + D ++ LI CK +Q D A L+++
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFES 507
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 161/326 (49%), Gaps = 12/326 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+S CK A+ +E V PN+V YN+ IHG ++G + +A +L E
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMER-SGVAPNIVTYNSFIHGFSREGRMREATRLFRE- 298
Query: 62 IQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSLD--VCSFNIIMDALCKQGLL 116
I+ + + VT+++LI G+C D+ +R ++ V ++N I+ LC+ G +
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ + EM + ++PD I+ L++ YC + A K+ MIE+GL D++SY L
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+CK+ ++ A M+ K P TY +L DG + + L RG
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRG- 477
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQS---YNILISGYCKNGRVDEAM 292
D+ Y ++ +C+ + +D A +F S+ + V + + Y + G+V EA
Sbjct: 478 LCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEAS 537
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFC 318
+++ M R ++ + + +K + ++
Sbjct: 538 ALFDVMYNRRLMVNLKLYKSISASYA 563
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 22/263 (8%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
L C+ +++++L KQ L + +M+K GV ++ Y +L+ +KA KL
Sbjct: 168 LQACT--VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
M E G+ PD+++YN LI YCK EA+++ + M + PN VTY G R
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-----LDKA---NKIFNSLIPE 269
GR+ +A + D+T ++ TL + + +D+A ++ S
Sbjct: 286 EGRMREATRLFREI------KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P V +YN ++ C++GR+ EA + M + I D+ T LINA+CK + A+ +
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 330 YKN------NRDLCPFKILMDGL 346
K D+ +K L+ G
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGF 422
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 173/347 (49%), Gaps = 12/347 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ LCK A + E+ + P++V Y V++G C+ G V+KA+KL M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
G P+ V++++L+ G C + E R ++N + S + ++++IM L ++G L
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V EM+ +G P + +L+ C + +ARK + + G +V ++ +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G+C+ + +D A+++ +DM N + TY L D L + GR+ +A + +M ++G
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQS-YNILISGYCKNGRVDEAMSI 294
P +T Y ++ C+ +D I +I ++ YN +I C G+++EA ++
Sbjct: 661 DPTPVT-YRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTL 719
Query: 295 YQNMCLRNIVR-DSETFKLLINAFCKRKQCDKA--IALYKNNRDLCP 338
+ LR R D++T L+ + K+ A +A NR+L P
Sbjct: 720 LGKV-LRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 12/307 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V+PNL+I NT I + + KA + M GI P+VVT++ +I G+C + +E
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 91 LLLNENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIK-RGVQPDVISYTILMDG 144
LL + C S+ IM LCK+ ++E + +M K G+ PD ++Y L+
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVP 203
D+A E G D Y+ ++ CK R+ EA +L +ML+K + P
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIF 263
+ VTY + +G CR G + A L MH GH+ P+ Y +L +C +
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK-PNTVSYTALLNGMCRTGKSLEAREM 511
Query: 264 NSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
++ E PN +Y++++ G + G++ EA + + M L+ LL+ + C+
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 320 RKQCDKA 326
+ +A
Sbjct: 572 DGRTHEA 578
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 167/350 (47%), Gaps = 31/350 (8%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN- 94
++Y +++ L K L ++++ M +RGI+ FS ++ + A Q ++ +L
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 95 ------ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
E +L +C N +D + L +A M G+ P+V++Y ++ GYC
Sbjct: 268 MQRAGVEPNLLIC--NTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN-LVPNAVT 207
+V++A +L + M G +PD SY ++ CK +R+ E +L + M ++ LVP+ VT
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSL 266
Y L L + +A FL +G R L Y+ I+ LC E + +A + N +
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG-YSAIVHALCKEGRMSEAKDLINEM 444
Query: 267 IPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+ + P+V +Y +++G+C+ G VD+A + Q M ++ ++ L+N C+ +
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 323 CDKAIALYKNNRD------LCPFKILMDGLRKNGMEEVAQRVSQLYGACD 366
+A + + + + ++M GLR+ G +L ACD
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG---------KLSEACD 545
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 39/276 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +M GL + A ++E+ L+ P V N ++ LC+DG ++A+K E
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREM-VLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+ +G +VV F+++I+GFC D+ +L++ L DV ++ ++D L K+G +
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI 645
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD-------------KARKLFDMMIE 163
EA + +M+ +G+ P ++Y ++ YC KVD K R +++ +IE
Sbjct: 646 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIE 705
Query: 164 AGLV--------------------PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
V D + L++GY K A + M +NL+P
Sbjct: 706 KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
+ + L L G++ +A + R+ RGH P
Sbjct: 766 DVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 162/321 (50%), Gaps = 20/321 (6%)
Query: 6 MSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG 65
+ G CK AI+ + ++PN+ +Y++ + +C G + +A + E+ + G
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFR----LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG 403
Query: 66 IFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
+ PD V ++++I G+C+ + + LL + N + + I++ A + G + +A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+V M G++ DV++Y LM GY +++K +L D M AG+ PDV +YNILI
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA---WNFLTRMHYRGHR 237
+DEA + +++ + VP+ + + + G + G +A W ++ + +
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK--- 580
Query: 238 PPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
PD+ + +L C+ Q ++KA +FN L+ +P+V YN LI GYC G +++A
Sbjct: 581 -PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 294 IYQNMCLRNIVRDSETFKLLI 314
+ M R ++ + T L+
Sbjct: 640 LIGLMVQRGMLPNESTHHALV 660
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
++P++V + I LCK G + +A + ++ GI D V+ SS+I GFC + +E
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 91 LLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
L++ L ++ ++ + +C G +L A + E+ + G+ PD + YT ++DGYC
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+ DKA + F ++++G P + + ILI + + +A ++ +M T+ L + VTY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLI 267
L G + +L + + M G PD+ YNI++ ++ + ++D+AN+I + LI
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAG-ISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 268 PE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
P+ ++ +I G+ K G EA ++ M + D T L++ +CK ++ +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 325 KAIALY 330
KAI L+
Sbjct: 601 KAIVLF 606
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 136/315 (43%), Gaps = 19/315 (6%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV---- 89
N + + I C DG +K +L M GI PD+V F+ I C A KE
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 90 -RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
+L L S D S + ++D CK G EA + + R P++ Y+ + C
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICST 386
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+ +A +F + E GL+PD Y +I GYC + R D+A +L P+ T
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP 268
L RFG + DA + M G + D+ YN ++ + H + NK+F LI
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKL-DVVTYNNLMHGYGKTH--QLNKVFE-LID 502
Query: 269 E-------PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
E P+V +YNILI G +DEA I + R V + F +I F KR
Sbjct: 503 EMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562
Query: 322 QCDKAIALYKNNRDL 336
+A L+ DL
Sbjct: 563 DFQEAFILWFYMADL 577
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 133/253 (52%), Gaps = 8/253 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLC-KDGLVNKAQKLCSE 60
Y T++ G C + A Q L L+ P + +T++ G C + G ++ A+ +
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGAL--LKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M G+ DVVT+++L++G+ Q +V L++E S DV ++NI++ ++ +G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ EA+ + E+I+RG P +++T ++ G+ + +A L+ M + + PDV + +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ GYCK +R+++A+ L +L L P+ V Y L G C G + A + M RG
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 236 HRPPDLTPYNIIL 248
P + T + ++L
Sbjct: 649 MLPNESTHHALVL 661
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
T++ G C GS + +++ + +K ++V YN ++HG K +NK +L EM
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 64 RGIFPDVVTFSSLIYGFC---HADQWKEV--RLLLNENSLDVCSFNIIMDALCKQGLLLE 118
GI PDV T++ LI+ + D+ E+ L+ +F ++ K+G E
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + + M ++PDV++ + L+ GYC +++KA LF+ +++AGL PDV YN LI
Sbjct: 567 AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIH 626
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
GYC + +++A L M+ + ++PN T+ L GL
Sbjct: 627 GYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 151/343 (44%), Gaps = 22/343 (6%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL------IYGFCHADQWKEV 89
+++ +I ++ VN A KL ++ Q GIFP SL ++G A ++ E
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE- 260
Query: 90 RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
+L L+ ++ + C G + + M G++PD++++T+ +D C
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+ +A + + G+ D S + +I G+CK+ + +EA+ L L PN Y
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYS 377
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
+C G + A + G PD Y +++ C DKA + F +L+
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELG-LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 269 E---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
P++ + ILI + G + +A S+++NM + D T+ L++ + K Q +K
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 326 AIALYKNNR------DLCPFKILMDGLRKNG-MEEVAQRVSQL 361
L R D+ + IL+ + G ++E + +S+L
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 162/321 (50%), Gaps = 20/321 (6%)
Query: 6 MSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG 65
+ G CK AI+ + ++PN+ +Y++ + +C G + +A + E+ + G
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFR----LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELG 403
Query: 66 IFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
+ PD V ++++I G+C+ + + LL + N + + I++ A + G + +A
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+V M G++ DV++Y LM GY +++K +L D M AG+ PDV +YNILI
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA---WNFLTRMHYRGHR 237
+DEA + +++ + VP+ + + + G + G +A W ++ + +
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK--- 580
Query: 238 PPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
PD+ + +L C+ Q ++KA +FN L+ +P+V YN LI GYC G +++A
Sbjct: 581 -PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACE 639
Query: 294 IYQNMCLRNIVRDSETFKLLI 314
+ M R ++ + T L+
Sbjct: 640 LIGLMVQRGMLPNESTHHALV 660
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
++P++V + I LCK G + +A + ++ GI D V+ SS+I GFC + +E
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 91 LLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
L++ L ++ ++ + +C G +L A + E+ + G+ PD + YT ++DGYC
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+ DKA + F ++++G P + + ILI + + +A ++ +M T+ L + VTY
Sbjct: 422 GRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLI 267
L G + +L + + M G PD+ YNI++ ++ + ++D+AN+I + LI
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAG-ISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 268 PE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
P+ ++ +I G+ K G EA ++ M + D T L++ +CK ++ +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 325 KAIALY 330
KAI L+
Sbjct: 601 KAIVLF 606
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 136/315 (43%), Gaps = 19/315 (6%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV---- 89
N + + I C DG +K +L M GI PD+V F+ I C A KE
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 90 -RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
+L L S D S + ++D CK G EA + + R P++ Y+ + C
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICST 386
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+ +A +F + E GL+PD Y +I GYC + R D+A +L P+ T
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP 268
L RFG + DA + M G + D+ YN ++ + H + NK+F LI
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKL-DVVTYNNLMHGYGKTH--QLNKVFE-LID 502
Query: 269 E-------PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
E P+V +YNILI G +DEA I + R V + F +I F KR
Sbjct: 503 EMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562
Query: 322 QCDKAIALYKNNRDL 336
+A L+ DL
Sbjct: 563 DFQEAFILWFYMADL 577
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 133/253 (52%), Gaps = 8/253 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLC-KDGLVNKAQKLCSE 60
Y T++ G C + A Q L L+ P + +T++ G C + G ++ A+ +
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGAL--LKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M G+ DVVT+++L++G+ Q +V L++E S DV ++NI++ ++ +G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ EA+ + E+I+RG P +++T ++ G+ + +A L+ M + + PDV + +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ GYCK +R+++A+ L +L L P+ V Y L G C G + A + M RG
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 236 HRPPDLTPYNIIL 248
P + T + ++L
Sbjct: 649 MLPNESTHHALVL 661
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 5/217 (2%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
T++ G C GS + +++ + +K ++V YN ++HG K +NK +L EM
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 64 RGIFPDVVTFSSLIYGFC---HADQWKEV--RLLLNENSLDVCSFNIIMDALCKQGLLLE 118
GI PDV T++ LI+ + D+ E+ L+ +F ++ K+G E
Sbjct: 507 AGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + + M ++PDV++ + L+ GYC +++KA LF+ +++AGL PDV YN LI
Sbjct: 567 AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIH 626
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
GYC + +++A L M+ + ++PN T+ L GL
Sbjct: 627 GYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 151/343 (44%), Gaps = 22/343 (6%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL------IYGFCHADQWKEV 89
+++ +I ++ VN A KL ++ Q GIFP SL ++G A ++ E
Sbjct: 202 TVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE- 260
Query: 90 RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
+L L+ ++ + C G + + M G++PD++++T+ +D C
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+ +A + + G+ D S + +I G+CK+ + +EA+ L L PN Y
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYS 377
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP 268
+C G + A + G PD Y +++ C DKA + F +L+
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELG-LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 269 E---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
P++ + ILI + G + +A S+++NM + D T+ L++ + K Q +K
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 326 AIALYKNNR------DLCPFKILMDGLRKNG-MEEVAQRVSQL 361
L R D+ + IL+ + G ++E + +S+L
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 192/432 (44%), Gaps = 86/432 (19%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ TL+ G K +A+ L E+++ L ++V+YN I K G V+ A K E
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSL-DADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 61 MIQRGIFPDVVTFSSLI-----------------------------------YGFCHADQ 85
+ G+ PD VT++S+I G+ A +
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 86 WKEVRLLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
+ E LL V ++N I+ L K G + EA V +E +K+ P++ +Y I
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV-FEEMKKDAAPNLSTYNI 382
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
L+D C K+D A +L D M +AGL P+V + NI++ CK +++DEA + E+M K
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM---------------------HYR---GH 236
P+ +T+ L DGL + GR+ DA+ +M H R GH
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 237 R----------PPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGY 282
+ PDL N ++ + + +K +F + P+ +SY+ILI G
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DL 336
K G +E ++ +M + V D+ + ++I+ FCK + +KA L + + +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 337 CPFKILMDGLRK 348
+ ++DGL K
Sbjct: 623 VTYGSVIDGLAK 634
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 178/361 (49%), Gaps = 25/361 (6%)
Query: 9 LCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP 68
LCKS+ A +E++ ++ P+ + + ++I GL K G V+ A K+ +M+
Sbjct: 422 LCKSQKLDEACAMFEEMD-YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 69 DVVTFSSLIYGFCH----ADQWKEVRLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVC 123
+ + ++SLI F + D K + ++N+N S D+ N MD + K G + A+
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
E+ R PD SY+IL+ G ++ +LF M E G V D +YNI+I G+CK
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
+V++A L E+M TK P VTY + DGL + RL +A+ M + + +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY-----MLFEEAKSKRIEL 655
Query: 244 YNIILETLCEQ-----HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
+I +L + +D+A I L+ + PN+ ++N L+ K ++EA+ +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKN 349
Q+M + T+ +LIN CK ++ +KA ++ + + P + ++ GL K
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 350 G 350
G
Sbjct: 776 G 776
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 176/358 (49%), Gaps = 19/358 (5%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P Y T+I + L +M + G P V F++LI GF +
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALS 224
Query: 92 LLNE---NSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
LL+E +SLD + +N+ +D+ K G + A +E+ G++PD ++YT ++ C
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
++D+A ++F+ + + VP ++YN +I GY + DEA +L E K +P+ +
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
Y + L + G++ +A M + P+L+ YNI+++ LC LD A ++ +S
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+ PNV++ NI++ CK+ ++DEA ++++ M + D TF LI+ K +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 323 CDKAIALYKN--NRDLCPFKILMDGLRKN----GMEEVAQRVSQ--LYGACDPDVALV 372
D A +Y+ + D I+ L KN G +E ++ + + C PD+ L+
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 154/308 (50%), Gaps = 10/308 (3%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+ N ++Y ++I G K+ +MI + PD+ ++ + A + ++ R
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 92 LLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ E D S++I++ L K G E + + Y M ++G D +Y I++DG+C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
KV+KA +L + M G P V +Y +I G KI+R+DEA L E+ +K + N V
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNS 265
Y L DG + GR+ +A+ L + +G P+L +N +L+ L + + +++A F S
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 266 LIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+ PN +Y ILI+G CK + ++A +Q M + + + ++ +I+ K
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 323 CDKAIALY 330
+A AL+
Sbjct: 778 IAEAGALF 785
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 160/332 (48%), Gaps = 16/332 (4%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA---DQWKEV 89
P+L + NT + + K G K + + E+ R PD ++S LI+G A ++ E+
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 90 RLLLNENS--LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ E LD ++NI++D CK G + +A+ + EM +G +P V++Y ++DG
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++D+A LF+ + +V Y+ LI G+ K+ R+DEA + E+++ K L PN T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
+ L D L + + +A M P +T Y I++ LC+ + +KA + +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT-YGILINGLCKVRKFNKAFVFWQEM 753
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ P+ SY +ISG K G + EA +++ V DS + +I +
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Query: 324 DKAIALYKNNRDL-CPFK-----ILMDGLRKN 349
A +L++ R P +L+D L KN
Sbjct: 814 MDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 156/324 (48%), Gaps = 9/324 (2%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
T M + K+ +E++A + V P+ Y+ +IHGL K G N+ +L M +
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLD-----VCSFNIIMDALCKQGLLLE 118
+G D ++ +I GFC + + LL E V ++ ++D L K L E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A+ + E + ++ +V+ Y+ L+DG+ ++D+A + + +++ GL P+++++N L+
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLD 700
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
K E ++EA+ + M PN VTY L +GLC+ + A+ F M +G +P
Sbjct: 701 ALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
++ +I ++ +A +F+ P+ YN +I G R +A S++
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 296 QNMCLRNIVRDSETFKLLINAFCK 319
+ R + ++T +L++ K
Sbjct: 821 EETRRRGLPIHNKTCVVLLDTLHK 844
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 163/372 (43%), Gaps = 50/372 (13%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE----VRLL- 92
YN+++ + + + ++ EM G P V T ++ G A++ +E V+++
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 93 --------------------LNENSL---------------DVCSFNIIMDALCKQGLLL 117
+N + + V F ++ K+G +
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
A ++ EM + D++ Y + +D + KVD A K F + GL PD +Y +I
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
CK R+DEA+ + E + VP Y + G G+ +A++ L R +G
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS- 339
Query: 238 PPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMSI 294
P + YN IL L + +D+A K+F + + PN+ +YNILI C+ G++D A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRK 348
+M + + T ++++ CK ++ D+A A+++ D F L+DGL K
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 349 NGMEEVAQRVSQ 360
G + A +V +
Sbjct: 460 VGRVDDAYKVYE 471
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 165/339 (48%), Gaps = 11/339 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ + + C+++ A+ ++ L KPN+ +YNTV++G K G ++KA +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M + PDV TF+ LI G+C + ++ L E +V SFN ++ G
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ E + YEMI+ G + + IL+DG C + +VD A L ++ ++P + Y
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L++ C + AM + E++ K P + L +GL + GR A F+ +M G
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANK---IFNSLIPEPNVQSYNILISGYCKNGRVDEA 291
P +T +N++L LC H AN+ + +S EP+ +Y++L+SG+ K GR E
Sbjct: 399 ILPDSVT-FNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAF-CKRKQCDKAIAL 329
+ M ++++ D T+ L++ C K K + +
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRM 496
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 17/300 (5%)
Query: 73 FSSLIYGFCHADQWKEVRLLLN------ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEM 126
F S I +C A + L + + +V +N +++ K G + +A M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
K +PDV ++ IL++GYC K D A LF M E G P+V S+N LI+G+ ++
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+E + + +M+ + T + L DGLCR GR+ DA + + + P + Y
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD-YGS 338
Query: 247 ILETLC-EQHLDKANKIFNSLIPEPNVQSY---NILISGYCKNGRVDEAMSIYQNMCLRN 302
++E LC E +A ++ L + + L+ G K+GR ++A + M
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 303 IVRDSETFKLLINAFCKRKQCDKA--IALYKNNRDLCP----FKILMDGLRKNGMEEVAQ 356
I+ DS TF LL+ C A + L +++ P + +L+ G K G + +
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGE 458
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 37/323 (11%)
Query: 15 SGNAIQTLQELEALQL--VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVT 72
+GN +Q L+ + + V + V+YN +I GLC G + A +M++RG+ PDV T
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 73 FSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
+++LI ALCK+G EA + M GV
Sbjct: 338 YNTLI------------------------------SALCKEGKFDEACDLHGTMQNGGVA 367
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
PD ISY +++ G C+ V++A + M+++ L+P+V +N++I GY + A+++
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
ML+ + PN T L G + GRL DAW M P D T YN++L C
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP-DTTTYNLLLGAAC 486
Query: 253 E-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
HL A ++++ ++ +P++ +Y L+ G C GR+ +A S+ + I D
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
Query: 309 TFKLLINAFCKRKQCDKAIALYK 331
F +L + + ++ +A +YK
Sbjct: 547 PFLILAKKYTRLQRPGEAYLVYK 569
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 165/378 (43%), Gaps = 50/378 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ ++M LC +G +A L++ V P L+ +N +++GLCK G + KA L E
Sbjct: 123 IHSSIMRDLCL-QGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-------------------------- 94
M + G P+ V++++LI G C + + L N
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 95 ------------------ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVI 136
LD+ I+MD+ K G +++A V EM ++ V D +
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 137 SYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
Y +++ G C + A M++ G+ PDV++YN LI CK + DEA +L M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 197 LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QH 255
+ P+ ++YK + GLC G + A N + P++ +N++++
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRA-NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 256 LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
A + N ++ +PNV + N LI GY K GR+ +A + M I D+ T+ L
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 313 LINAFCKRKQCDKAIALY 330
L+ A C A LY
Sbjct: 481 LLGAACTLGHLRLAFQLY 498
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 39/300 (13%)
Query: 35 LVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN 94
L I+++++ LC G ++ A L +MI G+ P ++T + L+ G
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNG--------------- 165
Query: 95 ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
LCK G + +A + EM + G P+ +SY L+ G C VDKA
Sbjct: 166 ---------------LCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERV-DEAMNLCEDMLTK---NLVPNAVTYKY 210
LF+ M + G+ P+ + NI++ C+ + + L E++L N + V
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTI 270
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE 269
L D + G + A M + + P D YN+I+ LC ++ A ++
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQK-NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 270 ---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
P+V +YN LIS CK G+ DEA ++ M + D ++K++I C ++A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 123/255 (48%), Gaps = 15/255 (5%)
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
IM LC QG L A + +MI GV P +I++ L++G C ++KA L M E G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
P+ SYN LI+G C + VD+A+ L M + PN VT + LC+ G + +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 226 NFLTRM---HYRGHRPPDLTPYNIILETLCE-----QHLDKANKIFNSLIPEPNVQSYNI 277
L + + P D+ I++++ + Q L+ ++ +P +V YN+
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV-VYNV 305
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRD 335
+I G C +G + A +M R + D T+ LI+A CK + D+A L+ N
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365
Query: 336 LCP----FKILMDGL 346
+ P +K+++ GL
Sbjct: 366 VAPDQISYKVIIQGL 380
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ GLC G N + P ++++N VI G + G + A + + M
Sbjct: 373 YKVIIQGLC-IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQ-----WKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G+ P+V T ++LI+G+ + W + + + D ++N+++ A C G L
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + EM++RG QPD+I+YT L+ G C K ++ KA L + G+ D + IL
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Query: 177 IQGYCKIERVDEA 189
+ Y +++R EA
Sbjct: 552 AKKYTRLQRPGEA 564
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
++ +M CL+ K+D A L MI +G++P + ++N L+ G CK +++A L +M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLD 257
PN V+Y L GLC + A M+ G RP +T NII+ LC++ +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVT-CNIIVHALCQKGVI 242
Query: 258 KAN--KIFNSLIPEPNVQSY------NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSET 309
N K+ ++ + IL+ KNG V +A+ +++ M +N+ DS
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 310 FKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
+ ++I C A + N D+ + L+ L K G
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 6/229 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+S LCK +G + L V P+ + Y +I GLC G VN+A + M
Sbjct: 338 YNTLISALCK-EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
++ + P+V+ ++ +I G+ +LN +V + N ++ K G L
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
++A V EM + PD +Y +L+ C + A +L+D M+ G PD+ +Y L
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
++G C R+ +A +L + + + V + L R R +A+
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 41/301 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+P + +N ++ LCK GLV + + L M R + PD TF+ L +G+C K+
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAM 288
Query: 91 LLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
LL EMI+ G +P+ +Y +D +C
Sbjct: 289 KLLE------------------------------EMIEAGHKPENFTYCAAIDTFCQAGM 318
Query: 151 VDKARKLFDMMIEAG---LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
VD+A LFD MI G P ++ ++I K ++ +E L M++ +P+ T
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
YK + +G+C ++ +A+ FL M +G+ PPD+ YN L LCE + D+A K++ +
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGY-PPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF--CKRK 321
+ P+VQ+YN+LIS + + D A + + M R+ V+D ET+ +IN C R
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 322 Q 322
+
Sbjct: 498 K 498
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 104/241 (43%), Gaps = 10/241 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ LCK L+ + VKP+ +N + G C+ KA KL EM
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMR--HRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN--------ENSLDVCSFNIIMDALCKQ 113
I+ G P+ T+ + I FC A E L + ++ +F +++ AL K
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
E + MI G PDV +Y +++G C+ KVD+A K D M G PD+ +Y
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N ++ C+ + DEA+ L M+ P+ TY L A+N T M
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Query: 234 R 234
R
Sbjct: 475 R 475
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQEL-EALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+ L G C+ + A++ L+E+ EA KP Y I C+ G+V++A L
Sbjct: 271 FNVLFFGWCRVRDPKKAMKLLEEMIEAGH--KPENFTYCAAIDTFCQAGMVDEAADLFDF 328
Query: 61 MIQRGIF---PDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCK 112
MI +G P TF+ +I D+ +E R++ DV ++ +++ +C
Sbjct: 329 MITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCM 388
Query: 113 QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWS 172
+ EA+ EM +G PD+++Y + C K D+A KL+ M+E+ P V +
Sbjct: 389 AEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQT 448
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
YN+LI + +++ D A N +M ++ V + TY + +GL R +A L +
Sbjct: 449 YNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVV 508
Query: 233 YRGHRPP 239
+G + P
Sbjct: 509 NKGLKLP 515
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 145/357 (40%), Gaps = 46/357 (12%)
Query: 11 KSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDV 70
++KGS +A+ L E + NL Y+ + L + V+ + +++QR + +
Sbjct: 87 RTKGSNHAVGILHEA-----IMANLNAYDDMEKAL-DESSVDLTTPVVCKILQRLQYEEK 140
Query: 71 VTFSSLIYGFCHADQWKEVRLLLNENSLDVCS--------FNIIMDAL------------ 110
F + H + + + NE +D+ S F I++D L
Sbjct: 141 TAFRFFTWA-GHQEHYSHEPIAYNE-MIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVL 198
Query: 111 -----------CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
C++ L + I+ QP++ ++ +L+D C KC + K +
Sbjct: 199 VDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALC-KCGLVKEGEALL 257
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
+ + PD ++N+L G+C++ +AM L E+M+ P TY D C+ G
Sbjct: 258 RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFN---SLIPE---PNVQ 273
+ +A + M +G T L + DKA + F +I P+V
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+Y +I G C +VDEA M + D T+ + C+ ++ D+A+ LY
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 11/304 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+KP + + ++H LC VN AQ+ + GI P T+S L+ G+ R
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ +E +D+ ++N ++DALCK G + + + EM G++PD S+ I + Y
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C V A K+ D M LVP+V+++N +I+ CK E+VD+A L ++M+ K P+
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFN 264
TY + C + A L+RM R PD YN++L+ L D+A +I+
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMD-RTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 407
Query: 265 SLIPE---PNVQSYNILISGYC-KNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ P V +Y ++I G K G+++EA ++ M I S T ++L N
Sbjct: 408 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW 467
Query: 321 KQCD 324
Q D
Sbjct: 468 GQMD 471
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 37/251 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ LCKS + QE+ L L KP+ + IH C G V+ A K+ M
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGL-KPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+ + P+V TF+ +I C ++ + LLL+
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD--------------------------- 337
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
EMI++G PD +Y +M +C C+V++A KL M +PD +YN++++
Sbjct: 338 ---EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLI 394
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR-FGRLPDAWNFLTRMHYRGHRPPD 240
+I R D A + E M + P TY + GL R G+L +A + M G
Sbjct: 395 RIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG----- 449
Query: 241 LTPYNIILETL 251
+ PY+ +E L
Sbjct: 450 IPPYSTTVEML 460
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 96 NSLDVCS--FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
N ++ S F I+ A + L EA M++ G++P V L+ C K V+
Sbjct: 132 NYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNH 191
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A++ F G+VP +Y+IL++G+ +I A + ++ML +N V + + Y L D
Sbjct: 192 AQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLD 251
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE--- 269
LC+ G + + M G + PD + I + C+ + A K+ + +
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLK-PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV 310
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
PNV ++N +I CKN +VD+A + M + D+ T+ ++ C + ++A L
Sbjct: 311 PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKL 370
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 160/351 (45%), Gaps = 45/351 (12%)
Query: 10 CKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD 69
CK A ++ V+P L YN +I GL + ++ AQ + ++ G PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNE---------------------------NSLDV-- 100
V T++ L+ + + + E+ L E ++LD+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 101 ------------CSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
C++ ++D L K G L EA + M+ G +P+ Y IL++G+
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+ D A LF M++ G+ PD+ +Y++L+ C + RVDE ++ +++ L P+ V Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN-IILETLCEQHLDKANKIFNSLI 267
+ +GL + RL +A M PDL YN +IL +++A KI+N +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 268 P---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
EPNV ++N LI GY +G+ + A ++YQ M ++ T++ L N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 185/434 (42%), Gaps = 87/434 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +LM GL K + + + L+E+E L L KPN+ + I L + G +N+A ++ M
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGL-KPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 62 IQRGIFPDVVTFSSLIYGFCHA-----------------------------DQWKEVRLL 92
G PDVVT++ LI C A D++ + R L
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 93 LNENSL-----------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
+ DV +F I++DALCK G EA M +G+ P++ +Y L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN- 200
+ G ++D A +LF M G+ P ++Y + I Y K A+ E M TK
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 201 ----------------------------------LVPNAVTYKYLFDGLCRFGRLPDAWN 226
LVP++VTY + + G + +A
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIF---NSLIPEPNVQSYNILISGY 282
L+ M G PD+ N ++ TL + +D+A K+F + +P V +YN L++G
Sbjct: 525 LLSEMMENGCE-PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA-LYKNNR-----DL 336
KNG++ EA+ +++ M + ++ TF L + CK + A+ L+K D+
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 337 CPFKILMDGLRKNG 350
+ ++ GL KNG
Sbjct: 644 FTYNTIIFGLVKNG 657
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 177/390 (45%), Gaps = 19/390 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T+ L G A L+++ V N YN +IH L K +A ++ M
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVL-NAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
I G P + T+SSL+ G V LL E +V +F I + L + G +
Sbjct: 215 ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ + M G PDV++YT+L+D C K+D A+++F+ M PD +Y L
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ + +D +M VP+ VT+ L D LC+ G +A++ L M +G
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 237 RPPDLTPYNIILETLCEQH-LDKANKIFN---SLIPEPNVQSYNILISGYCKNGRVDEAM 292
P+L YN ++ L H LD A ++F SL +P +Y + I Y K+G A+
Sbjct: 395 L-PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD--LCP----FKILMDGL 346
++ M + I + + + K + +A ++ +D L P + ++M
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 347 RKNG-MEEVAQRVSQLY-GACDPDVALVRN 374
K G ++E + +S++ C+PDV +V +
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 188/407 (46%), Gaps = 55/407 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL LCK+ A++ L ++ + V P++ YNT+I GL K+G V +A +M
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCV-PDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Query: 62 IQRGIFPDVVTFSSLIYGFCHA------------------DQ-----WKE-VRLLLNENS 97
++ ++PD VT +L+ G A DQ W++ + +L E
Sbjct: 670 -KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG 728
Query: 98 LD-VCSFN--IIMDALCKQGLLL--------------EAHAVCYEMIKR--GVQPDVISY 138
+D SF+ ++ + +C+ G + +E + GVQP + +Y
Sbjct: 729 IDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTY 788
Query: 139 TILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT 198
+L+ G ++ A+ +F + G +PDV +YN L+ Y K ++DE L ++M T
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLD 257
N +T+ + GL + G + DA + + P Y +++ L + L
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 258 KANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
+A ++F ++ PN YNILI+G+ K G D A ++++ M + D +T+ +L+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 315 NAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
+ C + D+ + +K N D+ + ++++GL K+ E A
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 11/306 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+ LCK+ G A TL + Q + PNL YNT+I GL + ++ A +L M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRD-QGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 62 IQRGIFPDVVTFSSLI-YGFCHADQWKEV----RLLLNENSLDVCSFNIIMDALCKQGLL 116
G+ P T+ I Y D + ++ + ++ + N + +L K G
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + Y + G+ PD ++Y ++M Y ++D+A KL M+E G PDV N L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I K +RVDEA + M L P VTY L GL + G++ +A M +G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
PP+ +N + + LC+ + A K+ ++ P+V +YN +I G KNG+V EAM
Sbjct: 605 -PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 293 SIYQNM 298
+ M
Sbjct: 664 CFFHQM 669
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 184/423 (43%), Gaps = 56/423 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ GL + +A++ +E+L VKP Y I K G A + +M
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLG-VKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLL---LNENSL--DVCSFNIIMDALCKQGLL 116
+GI P++V ++ +Y A + +E + + L + L D ++N++M K G +
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EM++ G +PDVI L++ +VD+A K+F M E L P V +YN L
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G K ++ EA+ L E M+ K PN +T+ LFD LC+ + A L +M G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 237 RPPDLTPYNIIL----------ETLCEQH-------------------------LDKANK 261
PD+ YN I+ E +C H ++ A K
Sbjct: 640 -VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 262 IFNSLI----PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL-LINA 316
I + + +P + LI +D A+S + + I RD ++ + +I
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 317 FCKRKQCDKAIALY-KNNRDLC------PFKILMDGLRKNGMEEVAQRV--SQLYGACDP 367
CK A L+ K +DL + +L+ GL + M E+AQ V C P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 368 DVA 370
DVA
Sbjct: 819 DVA 821
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 16/371 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ ++ + Q E+E V P++V + ++ LCK G +A M
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE-VRLLLNENSLDV----CSFNIIMDALCKQGLL 116
+GI P++ T+++LI G + + + L N SL V ++ + +D K G
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ A +M +G+ P++++ + + +A+++F + + GLVPD +YN++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
++ Y K+ +DEA+ L +M+ P+ + L + L + R+ +AW RM
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
+P +T YN +L L + + +A ++F ++ + PN ++N L CKN V A+
Sbjct: 570 KPTVVT-YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR-----DLCPFKILMDGLR 347
+ M V D T+ +I K Q +A+ + + D L+ G+
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV 688
Query: 348 KNGMEEVAQRV 358
K + E A ++
Sbjct: 689 KASLIEDAYKI 699
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 186/413 (45%), Gaps = 60/413 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ GL K+ A+ +++ +LV P+ V T++ G+ K L+ A K+ +
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMK--KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 62 I---------------------QRGIFPDVVTFSS-----------------LIYGFCHA 83
+ + GI + V+FS +I C
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGI-DNAVSFSERLVANGICRDGDSILVPIIRYSCKH 762
Query: 84 DQWKEVRLLLNENSLDVC------SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
+ R L + + D+ ++N+++ L + ++ A V ++ G PDV +
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
Y L+D Y K+D+ +L+ M + ++NI+I G K VD+A++L D++
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 198 T-KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-H 255
+ ++ P A TY L DGL + GRL +A M G RP + YNI++ +
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP-NCAIYNILINGFGKAGE 941
Query: 256 LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
D A +F ++ E P++++Y++L+ C GRVDE + ++ + + D + L
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 313 LINAFCKRKQCDKAIALY---KNNRDLCP----FKILMDGLRKNGMEEVAQRV 358
+IN K + ++A+ L+ K +R + P + L+ L GM E A ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 130/319 (40%), Gaps = 54/319 (16%)
Query: 59 SEMIQRGI--FPDVVTFSSLIYGFCHADQWKEVRLLLN-ENSLDVCSFNIIMDALCKQGL 115
SE + RG+ FPD T SS Y +K V LN ++ + C N +++AL G
Sbjct: 85 SEEVTRGLKSFPD--TDSSFSY-------FKSVAGNLNLVHTTETC--NYMLEALRVDGK 133
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L E V M KR ++ D +Y + +K + +A M E G V + +SYN
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 176 LIQ-----------------------------------GYCKIERVDEAMNLCEDMLTKN 200
LI G K +D M L ++M T
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKA 259
L PN T+ L R G++ +A+ L RM G PD+ Y ++++ LC + LD A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC-GPDVVTYTVLIDALCTARKLDCA 312
Query: 260 NKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++F + +P+ +Y L+ + N +D + M V D TF +L++A
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 317 FCKRKQCDKAIALYKNNRD 335
CK +A RD
Sbjct: 373 LCKAGNFGEAFDTLDVMRD 391
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 167/375 (44%), Gaps = 47/375 (12%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQL--VKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
TL+S + SG ++ E L+ +KP YN ++ G K G + A+ + SE
Sbjct: 305 ATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE--------NSL-------------- 98
M +RG+ PD T+S LI + +A +W+ R++L E NS
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 99 ------------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
D +N+++D K L A M+ G++PD +++
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
L+D +C + A ++F+ M G +P +YNI+I Y ER D+ L M ++
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK-- 258
++PN VT+ L D + GR DA L M G +P T YN ++ ++ L +
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS-TMYNALINAYAQRGLSEQA 603
Query: 259 --ANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
A ++ S +P++ + N LI+ + ++ R EA ++ Q M + D T+ L+ A
Sbjct: 604 VNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 317 FCKRKQCDKAIALYK 331
+ + K +Y+
Sbjct: 664 LIRVDKFQKVPVVYE 678
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 145/304 (47%), Gaps = 12/304 (3%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQ--KLCSEMIQRGIFPDVVTFSSLIYGFCHA-DQWKE 88
+ + V Y+ VI L + ++ +L E+ + + DV + +I GF + D K
Sbjct: 229 QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKA 288
Query: 89 VRLLLNEN----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
++LL S + I+ AL G LEA A+ E+ + G++P +Y L+ G
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKG 348
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
Y + A + M + G+ PD +Y++LI Y R + A + ++M ++ PN
Sbjct: 349 YVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPN 408
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIF 263
+ + L G G + L M G + PD YN++++T + + LD A F
Sbjct: 409 SFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK-PDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 264 NSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ ++ EP+ ++N LI +CK+GR A +++ M R + + T+ ++IN++ +
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 321 KQCD 324
++ D
Sbjct: 528 ERWD 531
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 40/286 (13%)
Query: 73 FSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
+S LI+ +++ E LL + +L ++N ++ A + + +A + +M + G Q
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQ 229
Query: 133 PDVISYTILMDGYCLKCKVDKAR--KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAM 190
D ++Y++++ K+D +L+ + L DV N +I G+ K +A+
Sbjct: 230 SDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKAL 289
Query: 191 NLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET 250
L L T + L GR +A + G +
Sbjct: 290 QLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIK------------- 336
Query: 251 LCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
P ++YN L+ GY K G + +A S+ M R + D T+
Sbjct: 337 -------------------PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 311 KLLINAFCKRKQCDKAIALYKNNR--DLCP----FKILMDGLRKNG 350
LLI+A+ + + A + K D+ P F L+ G R G
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 37/308 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T++ LCKSK A + + L V + V YN +++G C KA ++ EM
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKRTPKALEVLKEM 221
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
++RGI P++ T+++++ GF A Q + A
Sbjct: 222 VERGINPNLTTYNTMLKGFFRAGQ------------------------------IRHAWE 251
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
EM KR + DV++YT ++ G+ + ++ +AR +FD MI G++P V +YN +IQ C
Sbjct: 252 FFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLC 311
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
K + V+ A+ + E+M+ + PN TY L GL G + RM G P+
Sbjct: 312 KKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE-PNF 370
Query: 242 TPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQN 297
YN+++ E ++KA +F + PN+ +YNILISG R ++ +
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQ 430
Query: 298 MCLRNIVR 305
+ I+R
Sbjct: 431 AFAKEILR 438
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 150/305 (49%), Gaps = 17/305 (5%)
Query: 57 LCSEMIQRGIFPDVVTFSSLIYGFCHADQW-KEVRLLLNENS----LDVCSFNIIMDALC 111
L M I P TF+ + + A + K V+L LN + D+ SFN I+D LC
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
K + +A+ + + ++ D ++Y ++++G+CL + KA ++ M+E G+ P++
Sbjct: 173 KSKRVEKAYEL-FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
+YN +++G+ + ++ A +M ++ + VTY + G G + A N M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 232 HYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G P + YN +++ LC++ +++ A +F ++ EPNV +YN+LI G G
Sbjct: 292 IREG-VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKI 341
+ Q M + +T+ ++I + + + +KA+ L++ + D P + I
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 342 LMDGL 346
L+ G+
Sbjct: 411 LISGM 415
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 129/284 (45%), Gaps = 18/284 (6%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D SF++ +D + L ++ + M + P ++ I+ + Y K DKA KLF
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
M E G D+ S+N ++ CK +RV++A L + + V + VTY + +G C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLI 208
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQS 274
R P A L M RG P+LT YN +L+ + A + F + E +V +
Sbjct: 209 KRTPKALEVLKEMVERGIN-PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN-- 332
Y ++ G+ G + A +++ M ++ T+ +I CK+ + A+ +++
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 333 ----NRDLCPFKILMDGLRKNGM----EEVAQRVSQLYGACDPD 368
++ + +L+ GL G EE+ QR+ C+P+
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN--EGCEPN 369
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 118/243 (48%), Gaps = 10/243 (4%)
Query: 103 FNIIMDALCK-QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
N I+D L +G L +A + GV P+ SY +LM +CL + A +LF M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+E +VPDV SY ILIQG+C+ +V+ AM L +DML K VP+ ++Y L + LCR +L
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNI 277
+A+ L RM +G PDL YN ++ C E A K+ + ++ PN SY
Sbjct: 277 REAYKLLCRMKLKGCN-PDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK----RKQCDKAIALYKNN 333
LI G C G DE + M + L+ FC + CD + KN
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 334 RDL 336
L
Sbjct: 396 ETL 398
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 116/228 (50%), Gaps = 5/228 (2%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
S+N++M A C L A+ + +M++R V PDV SY IL+ G+C K +V+ A +L D M
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+ G VPD SY L+ C+ ++ EA L M K P+ V Y + G CR R
Sbjct: 252 LNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRA 311
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIFNSLIPE---PNVQSYNI 277
DA L M G P ++ Y ++ LC+Q + D+ K +I + P+ N
Sbjct: 312 MDARKVLDDMLSNGCSPNSVS-YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
L+ G+C G+V+EA + + + S+T++++I C + +K
Sbjct: 371 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 418
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 28 LQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK 87
L V PN YN ++ C + ++ A +L +M++R + PDV ++ LI GFC Q
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 88 EVRLLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
LL++ D S+ ++++LC++ L EA+ + M +G PD++ Y ++
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
G+C + + ARK+ D M+ G P+ SY LI G C DE E+M++K
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
P+ L G C FG++ +A + + + G T + +++ +C + + K+
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT-WEMVIPLICNEDESEKIKL 421
Query: 263 F 263
F
Sbjct: 422 F 422
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G C+ A++ L ++ V P+ + Y T+++ LC+ + +A KL M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFV-PDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR-----LLLNENSLDVCSFNIIMDALCKQGLL 116
+G PD+V ++++I GFC D+ + R +L N S + S+ ++ LC QG+
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG--LVPDVW 171
E EMI +G P L+ G+C KV++A + +++++ G L D W
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTW 403
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 174/339 (51%), Gaps = 17/339 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ LM + A++ L E+ L +P+ ++ ++ LCK+G V +A K+ +
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGL-EPDEYVFGCLLDALCKNGSVKEASKVFED 227
Query: 61 MIQRGIFPDVVTFSSLIYGFCHAD---QWKEVRLLLNENSL--DVCSFNIIMDALCKQGL 115
M ++ P++ F+SL+YG+C + KEV + + E L D+ F ++ G
Sbjct: 228 MREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYC-LKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ +A+ + +M KRG +P+V YT+L+ C + ++D+A ++F M G D+ +Y
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
LI G+CK +D+ ++ +DM K ++P+ VTY + + + + + +M R
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 235 G-HRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVD 289
G H PDL YN+++ C+ + +A +++N + P V ++ I+I+G+ G +
Sbjct: 407 GCH--PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLI 464
Query: 290 EAMSIYQNMCLRNIVRDSE--TFKLLINAFCKRKQCDKA 326
EA + ++ M R I + T K L+N + + + A
Sbjct: 465 EACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 163/367 (44%), Gaps = 50/367 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++G L+ LCK+ A + +++ + PNL + ++++G C++G + +A+++ +
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFEDMR--EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------------------------ 96
M + G+ PD+V F++L+ G+ HA + + L+N+
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 97 -----------------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYT 139
D+ ++ ++ CK G++ + ++V +M K+GV P ++Y
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
+M + K + ++ +L + M G PD+ YN++I+ CK+ V EA+ L +M
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG-HRPPDLTPYNIILETLC-EQHLD 257
L P T+ + +G G L +A N M RG P +L L + L+
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 258 KANKIFNSLIP-----EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
A +++ + E NV ++ I I G V EA S +M +++ T+
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 313 LINAFCK 319
L+ K
Sbjct: 562 LMKGLNK 568
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 51/316 (16%)
Query: 49 GLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSF 103
GL+ + +K E+I+ P++ F L+ F A+ K+ +L+E D F
Sbjct: 152 GLIEEMRKTNPELIE----PEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 104 NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
++DALCK G + EA V +E ++ P++ +T L+ G+C + K+ +A+++ M E
Sbjct: 206 GCLLDALCKNGSVKEASKV-FEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 264
Query: 164 AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA------------------ 205
AGL PD+ + L+ GY ++ +A +L DM + PN
Sbjct: 265 AGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMD 324
Query: 206 ------------------VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
VTY L G C++G + ++ L M +G P +T I+
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Query: 248 LETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIV 304
+ ++ ++ ++ + P++ YN++I CK G V EA+ ++ M +
Sbjct: 385 VAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 305 RDSETFKLLINAFCKR 320
+TF ++IN F +
Sbjct: 445 PGVDTFVIMINGFTSQ 460
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 189/403 (46%), Gaps = 55/403 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++ L + K + + + ++E L KP+ +++N +I+ + G +++A K+ +M
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGL-KPDTILFNAIINASSESGNLDQAMKIFEKM 415
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC------SFNIIMDALCKQGL 115
+ G P TF++LI G+ + +E LL+ D + NI++ A C Q
Sbjct: 416 KESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRK 475
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTIL---------------------------------- 141
+ EA + Y+M GV+PDV+++ L
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Query: 142 --MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
++GYC + K+++A + F M E G+ P+++ +N LI+G+ I +D + + M
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDK 258
+ P+ VT+ L + G + T M G PD+ ++I+ + +K
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM-LEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 259 ANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMC-LRNIVRDSETFKLLI 314
A +I N + PNV Y +ISG+C G + +AM +Y+ MC + + + T++ LI
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 315 NAFCKRKQCDKAIALYKN--NRDLCP----FKILMDGLRKNGM 351
F + KQ KA L K+ +++ P +++ DG + G+
Sbjct: 715 WGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 156/334 (46%), Gaps = 16/334 (4%)
Query: 41 VIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENS 97
+++GL + G +A + + +I+ G P ++T+++L+ + + L++ +N
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 98 L--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
L D FN I++A + G L +A + +M + G +P ++ L+ GY K++++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 156 KLFDMMI-EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
+L DMM+ + L P+ + NIL+Q +C +++EA N+ M + + P+ VT+ L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIF---NSLIPEP 270
R G A + + P++ I+ CE+ +++A + F L P
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
N+ +N LI G+ +D + M + D TF L+NA+ + +Y
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 331 KN------NRDLCPFKILMDGLRKNGMEEVAQRV 358
+ + D+ F IL G + G E A+++
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 139/322 (43%), Gaps = 54/322 (16%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC----------LK 148
DV S +M+ L ++G EAH++ +I+ G +P +I+YT L+ L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 149 CKV-------------------------DKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
KV D+A K+F+ M E+G P ++N LI+GY KI
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 184 ERVDEAMNLCEDMLTKNLV-PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
+++E+ L + ML ++ PN T L C ++ +AWN + +M G + PD+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVK-PDVV 496
Query: 243 PYNIILETLCEQHLDKANKIFNSLIP-------EPNVQSYNILISGYCKNGRVDEAMSIY 295
+N + + + + +IP +PNV++ +++GYC+ G+++EA+ +
Sbjct: 497 TFNTLAKAYA--RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKA------IALYKNNRDLCPFKILMDGLRKN 349
M + + F LI F D + + D+ F LM+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 350 GMEEVAQRV--SQLYGACDPDV 369
G + + + L G DPD+
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDI 636
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 14/321 (4%)
Query: 5 LMSGLCKSKGSG-NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
L+S C++ S + + + L ++P+ V + + LC+ G V++A+ L E+ +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVCSFNIIMDALCKQGLLL 117
+ PD T++ L+ C V ++E D+ SF I++D +C L
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + ++ G +PD Y +M G+C K +A ++ M E G+ PD +YN LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
G K RV+EA + M+ P+ TY L +G+CR G A + L M RG
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 238 PPDLTPYNIILETLCEQHL-DKANKIFNSLIPEPNVQ----SYNILISGYCKNGRVDEAM 292
P D T YN +L LC+ L DK +++ ++ V+ Y L+ K+G+V EA
Sbjct: 368 PNDCT-YNTLLHGLCKARLMDKGMELYE-MMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 293 SIYQNMCLRNIVRDSETFKLL 313
++ + D+ + L
Sbjct: 426 EVFDYAVDSKSLSDASAYSTL 446
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 139/312 (44%), Gaps = 48/312 (15%)
Query: 32 KPNLVIYNTVIHGLCK--DGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
+P + ++ C+ D ++ ++ + M+ G+ PD VT + C + E
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 90 RLLLNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKR-----GVQPDVISYT 139
+ L+ E + D ++N ++ LCK L V YE + V+PD++S+T
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL----HVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
IL+D C + +A L + AG PD + YN +++G+C + + EA+ + + M +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA 259
+ P+ +TY L GL + GR+ +A +L M G+
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY----------------------- 331
Query: 260 NKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
EP+ +Y L++G C+ G A+S+ + M R + T+ L++ CK
Sbjct: 332 ---------EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 320 RKQCDKAIALYK 331
+ DK + LY+
Sbjct: 383 ARLMDKGMELYE 394
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 5/229 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ LCK K + + E+ VKP+LV + +I +C + +A L S++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE---VRLLLNENSL--DVCSFNIIMDALCKQGLL 116
G PD +++++ GFC + E V + E + D ++N ++ L K G +
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA M+ G +PD +YT LM+G C K + A L + M G P+ +YN L
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
+ G CK +D+ M L E M + + + Y L L + G++ +A+
Sbjct: 377 LHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 10/183 (5%)
Query: 1 MYGTLMSGLCK-SKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+Y T+M G C SKGS A+ ++++ + V+P+ + YNT+I GL K G V +A+
Sbjct: 267 LYNTIMKGFCTLSKGS-EAVGVYKKMKE-EGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQG 114
M+ G PD T++SL+ G C + LL E + + C++N ++ LCK
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK-A 383
Query: 115 LLLEAHAVCYEMIK-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
L++ YEM+K GV+ + Y L+ KV +A ++FD +++ + D +Y
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
Query: 174 NIL 176
+ L
Sbjct: 444 STL 446
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 30/260 (11%)
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEA--GLVPDVWSYNILIQGYCK-----IERV 186
D+ + ++ Y V+ KLF ++++ P ++ IL+ C+ I V
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+NL M+ L P+ VT LC GR+ +A + + + + H PPD YN
Sbjct: 144 HRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK-HSPPDTYTYNF 199
Query: 247 ILETLCE--------QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+L+ LC+ + +D+ F+ +P++ S+ ILI C + + EAM + +
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDV---KPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDGLRKNGME 352
D + ++ FC + +A+ +YK + D + L+ GL K G
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 353 EVAQRV--SQLYGACDPDVA 370
E A+ + + +PD A
Sbjct: 317 EEARMYLKTMVDAGYEPDTA 336
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 159/346 (45%), Gaps = 15/346 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLV-NKAQKLCSE 60
Y +L+S S A+ +++E KP L+ YN +++ K G NK L +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEE-DGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M GI PD T+++LI +E + E S D ++N ++D K
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
EA V EM+ G P +++Y L+ Y +D+A +L + M E G PDV++Y
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L+ G+ + +V+ AM++ E+M PN T+ G+ + ++ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 236 HRPPDLTPYNIILETLCEQHLD-KANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
PD+ +N +L + +D + + +F + P +++N LIS Y + G ++A
Sbjct: 450 -LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKR---KQCDKAIALYKNNR 334
M++Y+ M + D T+ ++ A + +Q +K +A ++ R
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 168/381 (44%), Gaps = 54/381 (14%)
Query: 41 VIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDV 100
+I L K+G V+ A + + + + G DV +++SLI F ++ +++E + + D
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 101 C-----SFNIIMDAL-----------------------------------CKQGLL-LEA 119
C ++N+I++ CK+G L EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
V EM G D ++Y L+D Y + +A K+ + M+ G P + +YN LI
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
Y + +DEAM L M K P+ TY L G R G++ A + M G + P
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK-P 417
Query: 240 DLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIY 295
++ +N ++ + + KIF+ + P++ ++N L++ + +NG E ++
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKN 349
+ M V + ETF LI+A+ + ++A+ +Y+ DL + ++ L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 350 GMEEVAQRV--SQLYGACDPD 368
GM E +++V G C P+
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPN 558
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 157/361 (43%), Gaps = 45/361 (12%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV- 89
+ P++V +NT++ ++G+ ++ + EM + G P+ TF++LI + +++
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 90 ----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
R+L + D+ ++N ++ AL + G+ ++ V EM +P+ ++Y L+ Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 146 ----------------------------------CLKCKV-DKARKLFDMMIEAGLVPDV 170
C KC + +A + F + E G PD+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
+ N ++ Y + + V +A + + M + P+ TY L R + L
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNG 286
+ +G +P D+ YN ++ C + A++IF+ + P+V +YN I Y +
Sbjct: 690 ILAKGIKP-DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGL 346
+EA+ + + M + T+ +++ +CK + D+A ++ R+L P + L
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDL 808
Query: 347 R 347
R
Sbjct: 809 R 809
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/444 (20%), Positives = 171/444 (38%), Gaps = 116/444 (26%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ KS A++ L E+ L P++V YN++I +DG++++A +L ++M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------------------------- 96
++G PDV T+++L+ GF A + + + E
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 97 ---------------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
S D+ ++N ++ + G+ E V EM + G P+ ++ L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI-------------------------- 175
+ Y ++A ++ M++AG+ PD+ +YN
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 176 ---------LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
L+ Y + + +L E++ + + P AV K L + LP+A
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 227 FLTRMHYRGHRPPDLTPYNI----------------ILETLCEQHLDKANKIFNSLI--- 267
+ + RG PD+T N +L+ + E+ + +NSL+
Sbjct: 616 AFSELKERGFS-PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 268 --------------------PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDS 307
+P++ SYN +I YC+N R+ +A I+ M IV D
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 308 ETFKLLINAFCKRKQCDKAIALYK 331
T+ I ++ ++AI + +
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVR 758
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 19 IQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIY 78
+ +L E +++P V+ T++ K L+ +A++ SE+ +RG PD+ T +S++
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 79 GFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQP 133
+ + +L+ E + ++N +M + ++ + E++ +G++P
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLC 193
D+ISY ++ YC ++ A ++F M +G+VPDV +YN I Y +EA+ +
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 194 EDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
M+ PN TY + DG C+ R +A F+
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
LD II+ L K+G + A + + + G DV SYT L+ + + +A +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERV-DEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
F M E G P + +YN+++ + K+ ++ +L E M + + P+A TY L C
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CC 289
Query: 217 RFGRL-PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIP---EPN 271
+ G L +A M G +T YN +L+ + H K A K+ N ++ P+
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVT-YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ +YN LIS Y ++G +DEAM + M + D T+ L++ F + + + A+++++
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 332 NNRD 335
R+
Sbjct: 409 EMRN 412
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 123/307 (40%), Gaps = 40/307 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T+++ L + + + L E+E + KPN + Y +++H + L E+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGR-CKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
I P V +L+ D E +E S D+ + N ++ ++ ++
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A+ V M +RG P + +Y LM + K+ ++ ++ G+ PD+ SYN +
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I YC+ R+ +A + +M +VP+ +TY +A + M G
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQ 296
RP N +YN ++ GYCK R DEA +
Sbjct: 766 RP--------------------------------NQNTYNSIVDGYCKLNRKDEAKLFVE 793
Query: 297 NMCLRNI 303
+ LRN+
Sbjct: 794 D--LRNL 798
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ +L K NA T +++ + P + N + L G V+ A + E
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFL-PTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQW-KEVRLLLNENSLDV----CSFNIIMDALCKQGL 115
M + I P+ T + ++ G+C + + K + LL + L S+N ++ C++GL
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A + M K G+QP+V+++ L+ G+C K+ +A K+F M + P+ +YN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI GY + + A EDM+ + + +TY L GLC+ + A F+ +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P T +I+ ++ D+ +++ S+I PN Q++N+L+S +C+N D A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 293 SIYQNMCLRNIVRDSETFKLLINA 316
+ + M R+I DS T + N
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNG 492
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 17/272 (6%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
+ N++M C+ G L + + +M + G + +SY L+ G+C K + A KL +MM
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
++GL P+V ++N LI G+C+ ++ EA + +M N+ PN VTY L +G + G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNI 277
A+ F M G + D+ YN ++ LC+Q KA + L E PN +++
Sbjct: 360 EMAFRFYEDMVCNGIQR-DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLC 337
LI G C D +Y++M + +TF +L++AFC+ + D A + R++
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL---REMV 475
Query: 338 PFKILMD---------GLRKNGMEEVAQRVSQ 360
I +D GL+ G +++ +++ Q
Sbjct: 476 RRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQ 507
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 41/256 (16%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+MSG C+S I+ LQ++E L + V YNT+I G C+ GL++ A KL + M +
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGF-RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-------------NSL------------- 98
G+ P+VVTF++LI+GFC A + +E + E N+L
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 99 --------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
D+ ++N ++ LCKQ +A E+ K + P+ +++ L+ G
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
C++ D+ +L+ MI +G P+ ++N+L+ +C+ E D A + +M+ +++ +
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 205 AVTYKYLFDGLCRFGR 220
+ T + +GL G+
Sbjct: 483 SRTVHQVCNGLKHQGK 498
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 41/200 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL+ G C++ A + E++A+ V PN V YNT+I+G + G A + +M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVN-VAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSLDVCS--------------- 102
+ GI D++T+++LI+G C + ++ V+ L EN + S
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 103 ---------------------FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
FN+++ A C+ A V EM++R + D + +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 142 MDGYCLKCKVDKARKLFDMM 161
+G + K +KL M
Sbjct: 490 CNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ +L K NA T +++ + P + N + L G V+ A + E
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFL-PTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQW-KEVRLLLNENSLDV----CSFNIIMDALCKQGL 115
M + I P+ T + ++ G+C + + K + LL + L S+N ++ C++GL
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A + M K G+QP+V+++ L+ G+C K+ +A K+F M + P+ +YN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI GY + + A EDM+ + + +TY L GLC+ + A F+ +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
P T +I+ ++ D+ +++ S+I PN Q++N+L+S +C+N D A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 293 SIYQNMCLRNIVRDSETFKLLINA 316
+ + M R+I DS T + N
Sbjct: 469 QVLREMVRRSIPLDSRTVHQVCNG 492
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 17/272 (6%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
+ N++M C+ G L + + +M + G + +SY L+ G+C K + A KL +MM
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
++GL P+V ++N LI G+C+ ++ EA + +M N+ PN VTY L +G + G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNI 277
A+ F M G + D+ YN ++ LC+Q KA + L E PN +++
Sbjct: 360 EMAFRFYEDMVCNGIQR-DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLC 337
LI G C D +Y++M + +TF +L++AFC+ + D A + R++
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL---REMV 475
Query: 338 PFKILMD---------GLRKNGMEEVAQRVSQ 360
I +D GL+ G +++ +++ Q
Sbjct: 476 RRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQ 507
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 41/256 (16%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+MSG C+S I+ LQ++E L + V YNT+I G C+ GL++ A KL + M +
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGF-RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-------------NSL------------- 98
G+ P+VVTF++LI+GFC A + +E + E N+L
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 99 --------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
D+ ++N ++ LCKQ +A E+ K + P+ +++ L+ G
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
C++ D+ +L+ MI +G P+ ++N+L+ +C+ E D A + +M+ +++ +
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 205 AVTYKYLFDGLCRFGR 220
+ T + +GL G+
Sbjct: 483 SRTVHQVCNGLKHQGK 498
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 41/200 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL+ G C++ A + E++A+ V PN V YNT+I+G + G A + +M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVN-VAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSLDVCS--------------- 102
+ GI D++T+++LI+G C + ++ V+ L EN + S
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 103 ---------------------FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
FN+++ A C+ A V EM++R + D + +
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 142 MDGYCLKCKVDKARKLFDMM 161
+G + K +KL M
Sbjct: 490 CNGLKHQGKDQLVKKLLQEM 509
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 172/340 (50%), Gaps = 16/340 (4%)
Query: 14 GSGNAIQTLQELEALQ---LVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDV 70
G G+ ++L+ + +Q KPN IY +I L ++GL++K ++ EM +G+ V
Sbjct: 117 GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSV 176
Query: 71 VTFSSLIYGFCHADQWKEVRLLL----NEN-SLDVCSFNIIMDALCKQGLLLEA-HAVCY 124
++++LI + +++ LL NE S + ++N +++A + GL E +
Sbjct: 177 FSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EM G+QPD+++Y L+ ++ D+A +F M + G+VPD+ +Y+ L++ + K+
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
R+++ +L +M + +P+ +Y L + + G + +A +M G P+ Y
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC-TPNANTY 355
Query: 245 NIILETLCEQ-HLDKANKIF---NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCL 300
+++L + D ++F S +P+ +YNILI + + G E ++++ +M
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 301 RNIVRDSETFKLLINAFCKRKQCDKA--IALYKNNRDLCP 338
NI D ET++ +I A K + A I Y D+ P
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVP 455
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 157/309 (50%), Gaps = 10/309 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
++P++V YNT++ GL ++A+ + M GI PD+ T+S L+ F + ++V
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 91 LLLNE----NSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
LL E SL D+ S+N++++A K G + EA V ++M G P+ +Y++L++ +
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ D R+LF M + PD +YNILI+ + + E + L DM+ +N+ P+
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIFN 264
TY+ + + G DA L M P Y ++E + L ++A FN
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS-KAYTGVIEAFGQAALYEEALVAFN 481
Query: 265 SLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
++ P++++++ L+ + + G V E+ +I + I R+ +TF I A+ +
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 322 QCDKAIALY 330
+ ++A+ Y
Sbjct: 542 KFEEAVKTY 550
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 14/260 (5%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
+ I++ L ++GLL + V EM +GV V SYT L++ Y + + + +L D M
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEA--MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR 220
+ P + +YN +I C +D + L +M + + P+ VTY L C
Sbjct: 204 NEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRG 261
Query: 221 LPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYN 276
L D + R G PDLT Y+ ++ET + + L+K + + P++ SYN
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 277 ILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY------ 330
+L+ Y K+G + EAM ++ M ++ T+ +L+N F + + D L+
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 331 KNNRDLCPFKILMDGLRKNG 350
+ D + IL++ + G
Sbjct: 382 NTDPDAATYNILIEVFGEGG 401
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 17 NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL 76
+A + LQ + A +V P+ Y VI + L +A + M + G P + TF SL
Sbjct: 440 DARKILQYMTANDIV-PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 77 IYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGV 131
+Y F KE RL+ + + +FN ++A + G EA +M K
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
PD + ++ Y VD+ R+ F+ M + ++P + Y +++ Y K ER D+
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNE 618
Query: 192 LCEDMLTKNLVPN 204
L E+ML+ N V N
Sbjct: 619 LLEEMLS-NRVSN 630
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 127/305 (41%), Gaps = 9/305 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ KS A+ +++A PN Y+ +++ + G + ++L EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCT-PNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN----EN-SLDVCSFNIIMDALCKQGLL 116
PD T++ LI F +KEV L + EN D+ ++ I+ A K GL
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + M + P +YT +++ + ++A F+ M E G P + +++ L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ + + V E+ + ++ + N T+ + + G+ +A M
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMS 293
P + T ++ + +D+ + F + P++ Y ++++ Y K R D+
Sbjct: 559 DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNE 618
Query: 294 IYQNM 298
+ + M
Sbjct: 619 LLEEM 623
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 157/329 (47%), Gaps = 11/329 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQEL--EALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLC 58
+Y +++ L K + G ++E+ E QL++P L + ++ +V KA ++
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAIEVL 206
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL----DVCSFNIIMDALCKQG 114
EM + G PD F L+ C K+ L + + ++ F ++ C+ G
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVG 266
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
++EA V +M + G +PD++ YT L+ GY K+ A L M G P+ Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+LIQ CK++R++EAM + +M + VTY L G C++G++ + L M +
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK 386
Query: 235 GHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
G P +LT +I++ ++ ++ ++ + P++ YN++I CK G V EA
Sbjct: 387 GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ ++ M + +TF ++IN +
Sbjct: 447 VRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 48/365 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++G L+ LCK +A + +++ V NL + ++++G C+ G + +A+ + +
Sbjct: 220 VFGCLLDALCKHGSVKDAAKLFEDMRMRFPV--NLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGL 115
M + G PD+V +++L+ G+ +A + + LL + + + +++ ALCK
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP------- 168
+ EA V EM + + DV++YT L+ G+C K+DK + D MI+ GL+P
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 169 ----------------------------DVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
D+ YN++I+ CK+ V EA+ L +M
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG-HRPPDLTPYNIILET-LCEQHLDK 258
L P T+ + +GL G L +A + M RG ++L T L ++ L+
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEM 517
Query: 259 ANKIFNSLIP----EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
A +++ + E NV S+ I I G EA S M + + +TF L+
Sbjct: 518 AKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLM 577
Query: 315 NAFCK 319
K
Sbjct: 578 KGLKK 582
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
F +++ ++ +A V EM K G +PD + L+D C V A KLF+ M
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM- 244
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
++ + L+ G+C++ ++ EA + M P+ V Y L G G++
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNIL 278
DA++ L M RG P + Y ++++ LC+ +++A K+F + E +V +Y L
Sbjct: 305 DAYDLLRDMRRRGFEP-NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 363
Query: 279 ISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDL 336
+SG+CK G++D+ + +M + ++ T+ ++ A K++ ++ + L + R +
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQI 421
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 131 VQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAM 190
++P++ + +L+ + V KA ++ D M + G PD + + L+ CK V +A
Sbjct: 181 IEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 191 NLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET 250
L EDM + V N + L G CR G++ +A L +M+ G
Sbjct: 239 KLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF-------------- 283
Query: 251 LCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
EP++ Y L+SGY G++ +A + ++M R ++ +
Sbjct: 284 ------------------EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 311 KLLINAFCKRKQCDKAIAL------YKNNRDLCPFKILMDGLRKNG 350
+LI A CK + ++A+ + Y+ D+ + L+ G K G
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 371
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 46/388 (11%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L GL + + A +TL+ +E + VKP V +N VI GL G ++KA+
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMEN-RGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 61 MIQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSLDVCSFNIIMDALC-KQGLL 116
+ + D +S++ GFC A D E R + E L + + +LC ++ +
Sbjct: 527 LEHKSREND----ASMVKGFCAAGCLDHAFE-RFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + M K GV+P+ Y L+ +C V KAR+ F++++ +VPD+++Y I+
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG---------LCRFGRLPDA--- 224
I YC++ +A L EDM +++ P+ VTY L + + F +PD
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYY 701
Query: 225 ---------WNFLTRMHY------RGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE 269
N L +++ R PD+ Y ++L+ E++L + K F+ +
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDV---K 758
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P+V Y +LI CK G + EA I+ M + D+ + LI CK +A +
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 330 YKN------NRDLCPFKILMDGLRKNGM 351
+ D+ P+ L+ G +NG
Sbjct: 819 FDRMIESGVKPDVVPYTALIAGCCRNGF 846
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 171/379 (45%), Gaps = 46/379 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ GLC +A + ++E + P++ +Y+ +I G K+ + KA + ++M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEK-HGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+++ + V SS++ +C + E L E SLD +N+ DAL K G +
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE---AGLVPDVWSY 173
EA + EM +G+ PDVI+YT L+ G CL+ K A FD+MIE G PD+ Y
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA---FDLMIEMDGTGKTPDIVIY 469
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N+L G EA + M + + P VT+ + +GL G L A F + +
Sbjct: 470 NVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
Query: 234 RGHR---------------------------PPDLTPYNIILETLCEQ--HLDKANKIFN 264
+ P + Y + +LC + ++ KA + +
Sbjct: 530 KSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLD 589
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+ EP Y LI +C+ V +A ++ + + IV D T+ ++IN +C+
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLN 649
Query: 322 QCDKAIALYKN--NRDLCP 338
+ +A AL+++ RD+ P
Sbjct: 650 EPKQAYALFEDMKRRDVKP 668
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 24/312 (7%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL + LC K + Q L + V+P +Y +I C+ V KA++
Sbjct: 566 VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEI 625
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGL 115
++ + I PD+ T++ +I +C ++ K+ L + DV ++++++++ + +
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDM 685
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
E A V PDV+ YTI+++ YC + K LF M +VPDV +Y +
Sbjct: 686 KREMEAF-------DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV 738
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L++ K ER NL +M ++ P+ Y L D C+ G L +A +M G
Sbjct: 739 LLKN--KPER-----NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Query: 236 HRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
PD PY ++ C+ +L +A IF+ +I +P+V Y LI+G C+NG V +A
Sbjct: 792 V-DPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 292 MSIYQNMCLRNI 303
+ + + M + I
Sbjct: 851 VKLVKEMLEKGI 862
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 31/266 (11%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
MYG L+ C+ A + + L ++V P+L Y +I+ C+ +A L +
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIV-PDLFTYTIMINTYCRLNEPKQAYALFED 660
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
M +R + PDVVT+S L+ D +E+ + DV + I+++ C L + +
Sbjct: 661 MKRRDVKPDVVTYSVLLNSDPELDMKREMEAF--DVIPDVVYYTIMINRYCHLNDLKKVY 718
Query: 121 AVCYEMIKRGVQPDVISY----------------------------TILMDGYCLKCKVD 152
A+ +M +R + PDV++Y T+L+D C +
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
+A+++FD MIE+G+ PD Y LI CK+ + EA + + M+ + P+ V Y L
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRP 238
G CR G + A + M +G +P
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 23 QELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH 82
+E+EA ++ P++V Y +I+ C + K L +M +R I PDVVT++ L+
Sbjct: 687 REMEAFDVI-PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 83 ADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ +E++ + DV + +++D CK G L EA + +MI+ GV PD YT L+
Sbjct: 746 RNLSREMKAF--DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
C + +A+ +FD MIE+G+ PDV Y LI G C+ V +A+ L ++ML K +
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 203 PNAVT 207
P +
Sbjct: 864 PTKAS 868
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 140/351 (39%), Gaps = 55/351 (15%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV--- 89
P++ N +I + G + E+ + G+ D T+ ++ D +E+
Sbjct: 180 PDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKL 239
Query: 90 --RLLLNENSLDVCSFNI-IMDALCKQGLLLEAHAVCYEMIKRGVQPDV----ISYTILM 142
RLL++E + C F + ++ LC + A+ + + + D I+Y ++
Sbjct: 240 LSRLLISETR-NPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVV 298
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG----------------------- 179
G C + +++ A + M + G+ PDV+ Y+ +I+G
Sbjct: 299 RGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKR 358
Query: 180 ------------YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNF 227
YC++ EA +L ++ N+ + V Y FD L + G++ +A
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 228 LTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP------EPNVQSYNILISG 281
M +G PD+ Y ++ C Q K + F+ +I P++ YN+L G
Sbjct: 419 FREMTGKGI-APDVINYTTLIGGCCLQG--KCSDAFDLMIEMDGTGKTPDIVIYNVLAGG 475
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
NG EA + M R + T ++I + DKA A Y++
Sbjct: 476 LATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 158/415 (38%), Gaps = 80/415 (19%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG------------ 65
A+ L+ +E + P++ Y TVI +C GL K E+++RG
Sbjct: 74 ALSFLKRIEG-NVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLL 132
Query: 66 ---------IFPDVVTFSSLIYGFCHADQWKEVRLLLNE------NSLDVCSFNIIMDAL 110
+ + ++L+ + + D + E + + D+ + N ++ +
Sbjct: 133 KAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRM 192
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD-MMIEAGLVPD 169
G +E+ + G+ D +Y +++ ++ KL ++I P
Sbjct: 193 IASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPC 252
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN----AVTYKYLFDGLCRFGRLPDAW 225
V+ N I+G C + D A L + + N++ + + Y+ + GLC R+ DA
Sbjct: 253 VFYLN-FIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAE 311
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---------------- 268
+ + M G PD+ Y+ I+E + ++ KA +FN ++
Sbjct: 312 SVVLDMEKHGI-DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQC 370
Query: 269 ------------------EPNVQ----SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRD 306
E N+ YN+ K G+V+EA+ +++ M + I D
Sbjct: 371 YCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPD 430
Query: 307 SETFKLLINAFCKRKQCDKAIALY------KNNRDLCPFKILMDGLRKNGMEEVA 355
+ LI C + +C A L D+ + +L GL NG+ + A
Sbjct: 431 VINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLL 92
YN VI LCK + A +EM RGI P++VTF++ + G+ K+V +LL
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 93 LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
++ DV +F++I++ LC+ + +A EM++ G++P+ I+Y IL+ C D
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD 547
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
++ KLF M E GL PD+++YN IQ +CK+ +V +A L + ML L P+ TY L
Sbjct: 548 RSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
L GR +A + + G P T
Sbjct: 608 KALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 170/419 (40%), Gaps = 54/419 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G+CK AI+ ++++E + +PN+ Y +I G G V++A K M
Sbjct: 218 YNILIHGVCKKGVVDEAIRLVKQMEQ-EGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 62 IQRGIFPDVVTFSSLIYG----------------FCHADQ------WKEVRLLLNENSL- 98
R + P+ T + ++G F D + V L+ NS+
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 99 -----------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
D +FN M L K L+E + + RGV+P Y +L
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+ + + + M GL+ V+SYN +I CK R++ A +M + +
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKAN 260
PN VT+ G G + L ++ G +P D+ +++I+ LC + + A
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKP-DVITFSLIINCLCRAKEIKDAF 515
Query: 261 KIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
F ++ EPN +YNILI C G D ++ ++ M + D + I +F
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 318 CKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRV--SQLYGACDPD 368
CK ++ KA L K D + L+ L ++G E A+ + S C PD
Sbjct: 576 CKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P+ +N + L K + + ++ + RG+ P + L+ +A ++ E
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 93 LNENSLD-----VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
L + +D V S+N ++D LCK + A EM RG+ P+++++ + GY +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ V K + + ++ G PDV +++++I C+ + + +A + ++ML + PN +T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL 266
Y L C G + +M G PDL YN +++ C+ + + KA ++ ++
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGL-SPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
Query: 267 IP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLL 313
+ +P+ +Y+ LI ++GR EA ++ ++ V DS T +L+
Sbjct: 592 LRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 41/330 (12%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+KP+ +YN VI L K ++ A +M G PD T++ LI+G
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHG----------- 224
Query: 91 LLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
+CK+G++ EA + +M + G +P+V +YTIL+DG+ + +
Sbjct: 225 -------------------VCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
VD+A K +MM L P+ + + G + +A + + K+ V Y
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDA 325
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP- 268
+ L + FL ++ RG+ PD + +N + L + H L + +IF+ +
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGY-IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR 384
Query: 269 --EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+P Y +L+ R E + M + ++ ++ +I+ CK ++ + A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 327 IALYKNNRD------LCPFKILMDGLRKNG 350
+D L F + G G
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 3/193 (1%)
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G++P Y ++D +D A F M G PD ++YNILI G CK VDEA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
+ L + M + PN TY L DG GR+ +A L M R P + T +
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 250 TL-CEQHLDKANKIFNSLIPEPNVQ--SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRD 306
C + + + N+Q Y+ ++ N E + + R + D
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 307 SETFKLLINAFCK 319
S TF ++ K
Sbjct: 355 SSTFNAAMSCLLK 367
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +++ LC++K +A +E+ ++PN + YN +I C G +++ KL ++M
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWG-IEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+ G+ PD+ +++ I FC + K+ LL
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAEELLK--------------------------- 589
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
M++ G++PD +Y+ L+ + +AR++F + G VPD ++ ++
Sbjct: 590 ---TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 177/371 (47%), Gaps = 19/371 (5%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ LCK+ AI+ + EL + P+ Y +++ LCK G V A +L +M
Sbjct: 112 LLYDLCKANRLKKAIRVI-ELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 65 GIFPDVVTFSSLIYGFC------HADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLE 118
G + VT+++L+ G C + Q+ E RL+ + + +++ +++A K+ E
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVE-RLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + E+I +G +P+++SY +L+ G+C + + D A LF + G +V SYNIL++
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR- 237
C R +EA +L +M + P+ VTY L + L GR A L M H+
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 238 PPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
T YN ++ LC E +D K + +I +PN +YN + S N +V EA
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFY 409
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA-LYKNNR-----DLCPFKILMDGLR 347
I Q++ + + +K +I + C++ A LY+ R D + L+ GL
Sbjct: 410 IIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 469
Query: 348 KNGMEEVAQRV 358
GM A V
Sbjct: 470 LEGMFTGAMEV 480
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 25/306 (8%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC------HADQ 85
KPN+ +++ LCK + KA ++ M+ GI PD ++ L+ C +A Q
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 86 WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
E ++ + + ++N ++ LC G L ++ ++++G+ P+ +Y+ L++
Sbjct: 163 LVE-KMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ D+A KL D +I G P++ SYN+L+ G+CK R D+AM L ++ K N
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-----EQHL---- 256
V+Y L LC GR +A + L M G R P + YNI++ +L EQ L
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMD-GGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 257 --DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
K N F SYN +I+ CK G+VD + M R + T+ I
Sbjct: 341 EMSKGNHQFRV-----TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AI 394
Query: 315 NAFCKR 320
+ C+
Sbjct: 395 GSLCEH 400
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 11/243 (4%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
++ G +P+V T L+ C ++ KA ++ ++M+ +G++PD +Y L+ CK
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
V AM L E M N VTY L GLC G L + F+ R+ +G P T Y+
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT-YS 215
Query: 246 IILETLC-EQHLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+LE E+ D+A K+ + +I EPN+ SYN+L++G+CK GR D+AM++++ + +
Sbjct: 216 FLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKNGMEEVA 355
+ ++ +L+ C + ++A +L + D P + IL++ L +G E A
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 356 QRV 358
+V
Sbjct: 336 LQV 338
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 142/275 (51%), Gaps = 12/275 (4%)
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSL-DVCSFNIIMDALCKQGL 115
++ G P+V + L+Y C A++ K+ + L+++ + D ++ +++ LCK+G
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ A + +M G + ++Y L+ G C+ ++++ + + +++ GL P+ ++Y+
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L++ K DEA+ L ++++ K PN V+Y L G C+ GR DA + +G
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 236 HRPPDLTPYNIILETL-CEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
+ ++ YNI+L L C+ ++AN + + P+V +YNILI+ +GR ++A
Sbjct: 277 FK-ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 292 MSIYQNMCLRN--IVRDSETFKLLINAFCKRKQCD 324
+ + + M N + ++ +I CK + D
Sbjct: 336 LQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD 370
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 16/338 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ K +G+ A++ L E+ ++ +PNLV YN ++ G CK+G + A L E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEI-IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
+G +VV+++ L+ C +W+E LL E + V ++NI++++L G
Sbjct: 273 PAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRT 332
Query: 117 LEAHAVCYEMIKRGVQPDVI--SYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+A V EM K Q V SY ++ C + KVD K D MI P+ +YN
Sbjct: 333 EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 175 ILIQGYCKI-ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
I C+ +V EA + + + K YK + LCR G A+ L M
Sbjct: 393 A-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 234 RGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE-----PNVQSYNILISGYCKNGRV 288
G PD Y+ ++ LC + + S++ E P V ++N +I G CK R
Sbjct: 452 CGF-DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
D AM +++ M + + + T+ +L+ + + A
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQEL-EALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
Y L++ L + A+Q L+E+ + + YN VI LCK+G V+ K E
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 378
Query: 61 MIQRGIFPDVVTFSSLIYGFC-HADQWKEVRLLLNE--NSLDVCS---FNIIMDALCKQG 114
MI R P+ T+++ I C H + +E ++ N C+ + ++ +LC++G
Sbjct: 379 MIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKG 437
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEA-GLVPDVWSY 173
A + YEM + G PD +Y+ L+ G CL+ A ++ +M E+ P V ++
Sbjct: 438 NTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNF 497
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N +I G CKI R D AM + E M+ K +PN TY L +G+ L A L +
Sbjct: 498 NAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRL 557
Query: 234 R 234
R
Sbjct: 558 R 558
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 161/333 (48%), Gaps = 11/333 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++MS L K++ + L+E+ L+ + + + KA + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL--TMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE----NSLDVCSFNIIMDALCKQGLLL 117
+ V T + L+ A KE ++L ++ + ++ ++ ++++ C+ L+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + +MI +G++PD++++ ++++G K A KLF +M G P+V SY I+I
Sbjct: 316 EAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+ +CK ++ A+ +DM+ L P+A Y L G +L + L M +GH
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH- 434
Query: 238 PPDLTPYNIILETLCEQHL-DKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
PPD YN +++ + Q + + A +I+N +I EP++ ++N+++ Y + +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRA 494
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+++ M + I D ++ +LI + +A
Sbjct: 495 VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 6/224 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++ GL +S+ +AI+ +++ PN+ Y +I CK + A + +M
Sbjct: 336 HNVMLEGLLRSRKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLL 116
+ G+ PD ++ LI GF + V LL E + D ++N ++ + Q +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + +MI+ ++P + ++ ++M Y + + R +++ MI+ G+ PD SY +L
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR 220
I+G + EA E+ML K + + Y R G+
Sbjct: 515 IRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D ++N +M L K +V EM +G+ + ++TI M + + KA +F
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
++M + V + N L+ + + EA L D L + PN +TY L +G CR
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLLNGWCRV 311
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFN---SLIPEPNVQS 274
L +A M +G +P D+ +N++LE L + A K+F+ S P PNV+S
Sbjct: 312 RNLIEAARIWNDMIDQGLKP-DIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
Y I+I +CK ++ A+ + +M + D+ + LI F +K+ D L K
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 115/253 (45%), Gaps = 41/253 (16%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE-VRL 91
PN++ Y +++G C+ + +A ++ ++MI +G+ PD+V + ++ G + + + ++L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 92 LLNENSLDVC----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
S C S+ I++ CKQ + A +M+ G+QPD YT L+ G+
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 148 KCKVD-----------------------------------KARKLFDMMIEAGLVPDVWS 172
+ K+D A ++++ MI+ + P + +
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
+N++++ Y + + E+M+ K + P+ +Y L GL G+ +A +L M
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Query: 233 YRGHRPPDLTPYN 245
+G + P L YN
Sbjct: 536 DKGMKTP-LIDYN 547
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 169/356 (47%), Gaps = 24/356 (6%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI---YGFCHADQ---- 85
P+ + YN +I LCK G + A L +M G PDV+T++++I + + +A+Q
Sbjct: 172 PDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRF 231
Query: 86 WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
WK+ L N + ++ ++++ +C+ A V +M G PD+++Y L++
Sbjct: 232 WKD--QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C + +++ + ++ GL + +YN L+ C E DE + M + P
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTV 349
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIF- 263
+TY L +GLC+ L A +F +M PD+ YN +L + ++ + D A ++
Sbjct: 350 ITYNILINGLCKARLLSRAIDFFYQM-LEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 264 ---NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
N+ P P + +YN +I G K G + +A+ +Y M I D T + LI FC+
Sbjct: 409 LLKNTCCP-PGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 321 KQCDKAIALYKNNRDL------CPFKILMDGLRKNGMEEVAQRVSQ--LYGACDPD 368
++A + K + +++++ GL K E+A V + L G C PD
Sbjct: 468 NLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 170/338 (50%), Gaps = 13/338 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ LCK A+ L+++ +L P+++ YNTVI + G +A + +
Sbjct: 177 YNMIIGNLCKKGHIRTALVLLEDM-SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+Q G P ++T++ L+ C +L + ++ D+ ++N +++ C++G L
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
E +V ++ G++ + ++Y L+ C D+ ++ ++M + P V +YNIL
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNIL 355
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I G CK + A++ ML + +P+ VTY + + + G + DA L +
Sbjct: 356 INGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK-NTC 414
Query: 237 RPPDLTPYNIILETLCEQHL-DKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAM 292
PP L YN +++ L ++ L KA ++++ ++ P+ + LI G+C+ V+EA
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 293 SIYQNMCLR-NIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ + R N +R S T++L+I CK+K+ + AI +
Sbjct: 475 QVLKETSNRGNGIRGS-TYRLVIQGLCKKKEIEMAIEV 511
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 16/332 (4%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLN 94
N ++H LC +G + A KL M + P + S+L+ G DQ + +R+++
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 95 ENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
+ D ++N+I+ LCK+G + A + +M G PDVI+Y ++ ++
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A + + ++ G P + +Y +L++ C+ A+ + EDM + P+ VTY L +
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE--- 269
CR G L + + + + G +T YN +L +LC ++ D+ +I N +
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVT-YNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P V +YNILI+G CK + A+ + M + + D T+ ++ A K D AI L
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 330 YKNNRDLC------PFKILMDGLRKNGMEEVA 355
++ C + ++DGL K G+ + A
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKA 438
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 140/292 (47%), Gaps = 42/292 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ +C+ GS AI+ L+++ A++ P++V YN++++ C+ G + + + +
Sbjct: 247 YTVLVELVCRYCGSARAIEVLEDM-AVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGLL 116
+ G+ + VT+++L++ C + W EV +LN + S V ++NI+++ LCK LL
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILM---------------------------------- 142
A Y+M+++ PD+++Y ++
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 143 -DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
DG K + KA +L+ M++AG+ PD + LI G+C+ V+EA + ++ +
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGN 485
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE 253
TY+ + GLC+ + A + M G + PD T Y I++ + E
Sbjct: 486 GIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK-PDETIYTAIVKGVEE 536
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ + K +AI+ L L+ P L+ YN+VI GL K GL+ KA +L +M
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLGLLKN-TCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+ GIFPD +T SLIYGFC A+ L+ EA
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRAN------------------------------LVEEAGQ 475
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
V E RG +Y +++ G C K +++ A ++ ++M+ G PD Y +++G
Sbjct: 476 VLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVE 535
Query: 182 KIERVDEAM 190
++ EA+
Sbjct: 536 EMGMGSEAV 544
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 53/377 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQ--LVKPNLVIYNTVIHGLCKDGLVNKAQK--- 56
+ ++ G CK+ A+Q L ++ + V PN V YN+VI+G CK G ++ A++
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 57 --------------------------------LCSEMIQRGIFPDVVTFSSLIYG-FCHA 83
LC EM +G+ + V ++S++Y F
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEG 375
Query: 84 DQWKEVRLLLNENS----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYT 139
D + +L + NS +D + I++ LC+ G + EA ++ ++ + D++ +
Sbjct: 376 DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHN 435
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
LM + K+ A ++ M+ GL D S+ LI GY K +++ A+ + + M+
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL-ETLCEQHLDK 258
N N V Y + +GL + G A + M + D+ YN +L E+L ++++
Sbjct: 496 NKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK-----DIVTYNTLLNESLKTGNVEE 550
Query: 259 ANKIFNSLIPEPNVQS-----YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLL 313
A+ I + + + +S +NI+I+ CK G ++A + + M R +V DS T+ L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 314 INAFCKRKQCDKAIALY 330
I +F K + +K + L+
Sbjct: 611 ITSFSKHRSQEKVVELH 627
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 174/357 (48%), Gaps = 17/357 (4%)
Query: 20 QTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYG 79
+ +E+++L V+ N+ +N VI+ CK+ + +A + M++ G++P+VV+F+ +I G
Sbjct: 204 KVYKEMDSLGYVE-NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 80 FCHADQWKEVRLLL--------NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGV 131
C + LL N S + ++N +++ CK G L A + +M+K GV
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
+ +Y L+D Y D+A +L D M GLV + YN ++ ++ AM+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
+ DM +KN+ + T + GLCR G + +A F ++ + D+ +N ++
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEK-KLVEDIVCHNTLMHHF 441
Query: 252 C-EQHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDS 307
++ L A++I S++ + + S+ LI GY K G+++ A+ IY M N +
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 308 ETFKLLINAFCKRKQCDKAIALYK--NNRDLCPFKILM-DGLRKNGMEEVAQRVSQL 361
+ ++N KR A A+ +D+ + L+ + L+ +EE +S++
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 157/326 (48%), Gaps = 19/326 (5%)
Query: 51 VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNI 105
+++ K+ EM G +V TF+ +IY FC + E R+L +V SFN+
Sbjct: 199 IDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNM 258
Query: 106 IMDALCKQG---LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
++D CK G L+ M V P+ ++Y +++G+C ++D A ++ M+
Sbjct: 259 MIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
++G+ + +Y L+ Y + DEA+ LC++M +K LV N V Y + L G +
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE----PNVQSYNIL 278
A + L M+ + + T I++ LC K F I E ++ +N L
Sbjct: 379 GAMSVLRDMNSKNMQIDRFTQA-IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 279 ISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY----KNNR 334
+ + ++ ++ A I +M ++ + D+ +F LI+ + K + ++A+ +Y K N+
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNK 497
Query: 335 --DLCPFKILMDGLRKNGMEEVAQRV 358
+L + +++GL K GM A+ V
Sbjct: 498 TSNLVIYNSIVNGLSKRGMAGAAEAV 523
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 41/318 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG L+ ++ S A++ E+ + LV N VIYN++++ L +G + A + +M
Sbjct: 329 YGALVDAYGRAGSSDEALRLCDEMTSKGLV-VNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 62 IQRGIFPDVVTFSSLIYGFC---HADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLL 116
+ + D T + ++ G C + + E + ++E L D+ N +M + L
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A + M+ +G+ D IS+ L+DGY + K+++A +++D MI+ ++ YN +
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 177 IQGYCK------IERVDEAMNLCEDMLTKNLVPNA------------------------- 205
+ G K E V AM + +D++T N + N
Sbjct: 508 VNGLSKRGMAGAAEAVVNAMEI-KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKS 566
Query: 206 ---VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
VT+ + + LC+FG A L M RG P +T +I + +K ++
Sbjct: 567 VSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Query: 263 FNSLIPEPNVQSYNILIS 280
+ LI + +I +S
Sbjct: 627 HDYLILQGVTPHEHIYLS 644
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
++D+ K++ M G V +V ++N++I +CK ++ EA+++ ML + PN V++
Sbjct: 198 EIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFN 257
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHR--PPDLTPYNIILETLCEQ-HLDKANKIFNSL 266
+ DG C+ G + A L +M P+ YN ++ C+ LD A +I +
Sbjct: 258 MMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDM 317
Query: 267 IPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQC 323
+ N ++Y L+ Y + G DEA+ + M + +V ++ + ++
Sbjct: 318 VKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDI 377
Query: 324 DKAIALYKN----NRDLCPFK--ILMDGLRKNG 350
+ A+++ ++ N + F I++ GL +NG
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 144/272 (52%), Gaps = 13/272 (4%)
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQ 113
S M + GI P+ TF+ L FC+ ++EV L + D+ ++N ++ + C++
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G L EA + M +R V PD+++YT L+ G C +V +A + F M++ G+ PD SY
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM-H 232
N LI YCK + ++ L +ML ++VP+ T K + +G R GRL A NF+ +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 233 YRGHRPPDLTPYNIILETLCEQHLDKANK-IFNSLIP----EPNVQSYNILISGYCKNGR 287
+ P ++ + I+ +LC++ A K + + +I E ++YN LI +
Sbjct: 405 LKVDIPFEVCDFLIV--SLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDA 462
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
++EA+ + + +N V D++T++ LI C+
Sbjct: 463 IEEALVLKGKLKNQNQVLDAKTYRALIGCLCR 494
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 11/325 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+S C+ +G L ++ + V P+LV Y ++I GLCKDG V +A + M
Sbjct: 274 YNTLVSSYCR-RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM 332
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE---NSL--DVCSFNIIMDALCKQGLL 116
+ RGI PD +++++LIY +C ++ + LL+E NS+ D + +I++ ++G L
Sbjct: 333 VDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRL 392
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI-EAGLVPDVWSYNI 175
L A E+ + V L+ C + K A+ L D +I E G +YN
Sbjct: 393 LSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNN 452
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI+ + + ++EA+ L + +N V +A TY+ L LCR GR +A + + M
Sbjct: 453 LIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSE 512
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNV---QSYNILISGYCKNG-RVDEA 291
+P ++ E DKA ++ + E + +SYN L+ C+ G +A
Sbjct: 513 VKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKA 572
Query: 292 MSIYQNMCLRNIVRDSETFKLLINA 316
+ + + M V + T K LI
Sbjct: 573 LELQERMQRLGFVPNRLTCKYLIQV 597
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 13/307 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV- 89
+ PN +N + + C D + +M + G PD+VT+++L+ +C + KE
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 90 ---RLLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+++ + D+ ++ ++ LCK G + EAH + M+ RG++PD +SY L+ Y
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL-VPN 204
C + + +++KL M+ +VPD ++ ++++G+ + R+ A+N ++ + +P
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPF 411
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTR-MHYRGHRPPDLTPYNIILETLCEQHLDKANKIF 263
V +L LC+ G+ A + L R + GH T YN ++E+L + +
Sbjct: 412 EVC-DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPET-YNNLIESLSRCDAIEEALVL 469
Query: 264 NSLIPEPN----VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ N ++Y LI C+ GR EA S+ M + DS L+ +CK
Sbjct: 470 KGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCK 529
Query: 320 RKQCDKA 326
DKA
Sbjct: 530 ELDFDKA 536
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 8/255 (3%)
Query: 94 NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
+E + D F++++ K GL+ E V E++ G V++ L++G ++
Sbjct: 160 DECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMED 219
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
+++ +M G+ P+ +++NIL +C E + E M + P+ VTY L
Sbjct: 220 CWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVS 279
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---E 269
CR GRL +A+ +L ++ YR PDL Y +++ LC+ + +A++ F+ ++ +
Sbjct: 280 SYCRRGRLKEAF-YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P+ SYN LI YCK G + ++ + M ++V D T K+++ F + + A+
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF 398
Query: 330 YKNNRDL---CPFKI 341
R L PF++
Sbjct: 399 VVELRRLKVDIPFEV 413
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
++ G + +A+ + EL L++ P + + +I LC++G A+ L +I+
Sbjct: 381 VIVEGFVREGRLLSAVNFVVELRRLKVDIP-FEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 64 R-GIFPDVVTFSSLIYGFCHADQWKEVRLLL----NENS-LDVCSFNIIMDALCKQGLLL 117
G T+++LI D +E +L N+N LD ++ ++ LC+ G
Sbjct: 440 EEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNR 499
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA ++ EM V+PD L+ GYC + DKA +L + + D SYN L+
Sbjct: 500 EAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLV 559
Query: 178 QGYCKIE-RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
+ C+ +A+ L E M VPN +T KYL L
Sbjct: 560 KAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 158/333 (47%), Gaps = 11/333 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++MS L K++ + L+E+ L+ + + + KA + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL--TMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE----NSLDVCSFNIIMDALCKQGLLL 117
+ V T + L+ A KE ++L ++ + ++ ++ ++++ C+ L+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + +MI G++PD++++ ++++G K A KLF +M G P+V SY I+I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+ +CK ++ A+ +DM+ L P+A Y L G +L + L M +GH
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH- 434
Query: 238 PPDLTPYNIILETLCEQHL-DKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
PPD YN +++ + Q + + +I+N +I EP++ ++N+++ Y + +
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
++ M + I D ++ +LI + +A
Sbjct: 495 VWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 158/333 (47%), Gaps = 11/333 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++MS L K++ + L+E+ L+ + + + KA + M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLL--TMETFTIAMKAFAAAKERKKAVGIFELM 254
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE----NSLDVCSFNIIMDALCKQGLLL 117
+ V T + L+ A KE ++L ++ + ++ ++ ++++ C+ L+
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 314
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + +MI G++PD++++ ++++G K A KLF +M G P+V SY I+I
Sbjct: 315 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 374
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+ +CK ++ A+ +DM+ L P+A Y L G +L + L M +GH
Sbjct: 375 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH- 433
Query: 238 PPDLTPYNIILETLCEQHL-DKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMS 293
PPD YN +++ + Q + + +I+N +I EP++ ++N+++ Y + +
Sbjct: 434 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 493
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
++ M + I D ++ +LI + +A
Sbjct: 494 VWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 37/295 (12%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
+ N ++ LCK + +A+ L + I+ G+ PDV+T+++LI G+
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRF------------- 61
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
I +D EA+AV M + G++PDV +Y L+ G +++ +
Sbjct: 62 --------IGID---------EAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQ 104
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN-LCEDMLTKNLVPNAVTYKYLFDGL 215
LFD M+ +GL PD+WSYN L+ Y K+ R EA L ED+ LVP TY L D L
Sbjct: 105 LFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDAL 164
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH----LDKANKIFNSLIPEPN 271
C+ G +A H + P+L YNI++ LC+ +D + PN
Sbjct: 165 CKSGHTDNAIELFK--HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+Y ++ Y K R+++ + ++ M D +++A K + ++A
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
VR L+ + NI +++LCK L A + + I+ GV PDVI+Y L+ GY
Sbjct: 2 VRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRF 61
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+D+A + M EAG+ PDV +YN LI G K ++ + L ++ML L P+ +Y
Sbjct: 62 IGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSY 121
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLI 267
L + GR +A+ L + P + YNI+L+ LC+ H D A ++F L
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Query: 268 P--EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+P + +YNILI+G CK+ RV + + + ++ T+ ++ + K K+ +K
Sbjct: 182 SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 326 AIALY 330
+ L+
Sbjct: 242 GLQLF 246
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 173/414 (41%), Gaps = 91/414 (21%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V P+++ YNT+I G + +++A + M + GI PDV T++SLI G V
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 91 LLLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIK-RGVQPDVISYTILMDG 144
L +E S D+ S+N +M K G EA + +E I G+ P + +Y IL+D
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
C D A +LF + ++ + P++ +YNILI G CK RV + ++ PN
Sbjct: 164 LCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 205 AVTYK--------------------------YLFDG---------LCRFGRLPDAWNFLT 229
AVTY Y FDG L + GR +A+ +
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMH 282
Query: 230 RMHYRGHRPPDLTPYNIIL------------ETLCEQHLDKANK--------IFNSLIP- 268
+ G R D+ YN +L + L E+ K K I N L+
Sbjct: 283 ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI 342
Query: 269 ------------------EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+P+V + N LI G CK G VD AM ++ +M VRD T+
Sbjct: 343 GNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM----EVRDEFTY 398
Query: 311 KLLINAFCK--RKQCDKAIALYKNNRDL----CPFKILMDGLRKNGMEEVAQRV 358
+++ CK R C + L N+ + + ++ G+R+ + A++
Sbjct: 399 TSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAARKT 452
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 47/280 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ LCKS + NAI+ + L++ VKP L+ YN +I+GLCK V + E+
Sbjct: 157 YNILLDALCKSGHTDNAIELFKHLKSR--VKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 62 IQRGIFPDVVTFSSLIY--------------------------GFCH---------ADQW 86
+ G P+ VT+++++ GF + +
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 87 KEVRLLLNE------NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
+E ++E S D+ S+N +++ K G L + E+ +G++PD ++TI
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTI 334
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
+++G A K + E G+ P V + N LI G CK VD AM L M
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM---- 390
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
V + TY + LC+ GRL A L + +G + P
Sbjct: 391 EVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 430
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 161/328 (49%), Gaps = 15/328 (4%)
Query: 4 TLMSGLCKSKGSGN----AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+L GL + G AI ++ + V+ + NT+I+ L +G + KA+
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQG 114
+ P+ V+F+ LI GF W+ +L E V ++N ++ LC+
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ +A ++ +MIK+ ++P+ +++ +LM G C K + ++A+KL M G P + +Y
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
IL+ K R+DEA L +M + + P+ V Y L + LC R+P+A+ LT M +
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Query: 235 GHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
G +P T Y ++++ C + D + N+++ P ++ +++G K G +D
Sbjct: 356 GCKPNAAT-YRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDH 414
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFC 318
A + + M +N+ S ++ L++ C
Sbjct: 415 ACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 124/230 (53%), Gaps = 5/230 (2%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
S N +++ L G L +A + ++P+ +S+ IL+ G+ KC + A K+FD M
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+E + P V +YN LI C+ + + +A +L EDM+ K + PNAVT+ L GLC G
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNI 277
+A + M YRG +P L Y I++ L ++ +D+A + + +P+V YNI
Sbjct: 273 NEAKKLMFDMEYRGCKP-GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNI 331
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
L++ C RV EA + M ++ ++ T++++I+ FC+ + D +
Sbjct: 332 LVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 6/220 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ LC++ G A L+++ + ++PN V + ++ GLC G N+A+KL +M
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDM-IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM 282
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
RG P +V + L+ + E +LLL E DV +NI+++ LC + +
Sbjct: 283 EYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRV 342
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ V EM +G +P+ +Y +++DG+C D + + M+ + P ++ +
Sbjct: 343 PEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
+ G K +D A + E M KNL + ++ L LC
Sbjct: 403 VAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 159/347 (45%), Gaps = 16/347 (4%)
Query: 16 GNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSS 75
G A++ + KP + + L ++GLV +A ++ + + GI VVT +S
Sbjct: 126 GKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNS 185
Query: 76 LIYGFCHA---DQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
++ G A D++ E+ + E+ D ++ ALC G + E + + + +K+G+
Sbjct: 186 VLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLD 245
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
P Y L+ G+C ++ MI P ++ Y +I+G C ++ EA +
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCI 305
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
+++ K P+ V Y + G C G L A M +G RP + YN+++
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFA-YNVMIHGHF 364
Query: 253 EQ-HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
++ + +N ++ + S N +I G+C +G+ DEA I++NM + ++
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 309 TFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGMEEVA 355
T+ LI FCK + +K + LYK + L GL+ +GM A
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKAL--------GLKPSGMAYAA 463
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 6/220 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+SG C+ + L + A P++ IY +I GLC + +A +
Sbjct: 250 VYAKLISGFCEIGNYACMSEVLHTMIAWNHF-PSMYIYQKIIKGLCMNKKQLEAYCIFKN 308
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
+ +G PD V ++++I GFC R L E + ++N+++ K+G
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE 368
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ A EM++ G ++S ++ G+C K D+A ++F M E G+ P+ +YN
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNA 428
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
LI+G+CK +V++ + L +++ L P+ + Y L L
Sbjct: 429 LIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 6/197 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y ++ GLC +K A + L+ + P+ V+Y T+I G C+ G + A+KL E
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKD-KGYAPDRVVYTTMIRGFCEKGWLGSARKLWFE 343
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGL 115
MI++G+ P+ ++ +I+G + V NE + S N ++ C G
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
EA + M + GV P+ I+Y L+ G+C + KV+K KL+ + GL P +Y
Sbjct: 404 SDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAA 463
Query: 176 LIQGYCKIERVDEAMNL 192
L++ + V ++NL
Sbjct: 464 LVRNLKMSDSVATSLNL 480
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 137/311 (44%), Gaps = 16/311 (5%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV--- 89
PN++ Y ++ + G N A+ + M G P +T+ ++ F D++KE
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 90 -RLLLNENSL----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
LL+E D +++++ K G +A V M+ +GV ++Y LM
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-- 289
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
+ + K++D M + + PDV SY +LI+ Y + R +EA+++ E+ML + P
Sbjct: 290 -SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIF 263
Y L D G + A M R PDL Y +L ++ A K F
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMR-RDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 264 NSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ EPN+ +Y LI GY K V++ M +Y+ M L I + +++A +
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 467
Query: 321 KQCDKAIALYK 331
K A+ YK
Sbjct: 468 KNFGSALGWYK 478
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+KP+ +Y+ +I+ K G KA+K+ S M+ +G+ VT++SL+ +KEV
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVS 299
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ ++ DV S+ +++ A + EA +V EM+ GV+P +Y IL+D +
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ V++A+ +F M + PD+WSY ++ Y ++ A + + PN
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 206 VTYKYLFDGLCR 217
VTY L G +
Sbjct: 420 VTYGTLIKGYAK 431
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 12/256 (4%)
Query: 85 QWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
+W + N + +D F +++ A K G A V + K G P+VISYT LM+
Sbjct: 127 EWLRYQNWWNFSEID---FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMES 183
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN---L 201
Y K + A +F M +G P +Y I+++ + + ++ EA + E +L + L
Sbjct: 184 YGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 243
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
P+ Y + + G A + M +G P YN ++ E + +K
Sbjct: 244 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV-PQSTVTYNSLMS--FETSYKEVSK 300
Query: 262 IFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
I++ + +P+V SY +LI Y + R +EA+S+++ M + + + +L++AF
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 319 KRKQCDKAIALYKNNR 334
++A ++K+ R
Sbjct: 361 ISGMVEQAKTVFKSMR 376
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 16/312 (5%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV--- 89
PN++ Y ++ + G N A+ + M G P +T+ ++ F D++KE
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 90 -RLLLNENSL----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
LL+E D +++++ K G +A V M+ +GV ++Y LM
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-- 296
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
+ + K++D M + + PDV SY +LI+ Y + R +EA+++ E+ML + P
Sbjct: 297 -SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIF 263
Y L D G + A M R PDL Y +L ++ A K F
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMR-RDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 414
Query: 264 NSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ EPN+ +Y LI GY K V++ M +Y+ M L I + +++A +
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 474
Query: 321 KQCDKAIALYKN 332
K A+ YK
Sbjct: 475 KNFGSALGWYKE 486
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+KP+ +Y+ +I+ K G KA+K+ S M+ +G+ VT++SL+ +KEV
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVS 306
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ ++ DV S+ +++ A + EA +V EM+ GV+P +Y IL+D +
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ V++A+ +F M + PD+WSY ++ Y ++ A + + PN
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 206 VTYKYLFDGLCR 217
VTY L G +
Sbjct: 427 VTYGTLIKGYAK 438
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 12/256 (4%)
Query: 85 QWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
+W + N + +D F +++ A K G A V + K G P+VISYT LM+
Sbjct: 134 EWLRYQNWWNFSEID---FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMES 190
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN---L 201
Y K + A +F M +G P +Y I+++ + + ++ EA + E +L + L
Sbjct: 191 YGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPL 250
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
P+ Y + + G A + M +G P YN ++ E + +K
Sbjct: 251 KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV-PQSTVTYNSLMS--FETSYKEVSK 307
Query: 262 IFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
I++ + +P+V SY +LI Y + R +EA+S+++ M + + + +L++AF
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 319 KRKQCDKAIALYKNNR 334
++A ++K+ R
Sbjct: 368 ISGMVEQAKTVFKSMR 383
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 163/335 (48%), Gaps = 13/335 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++G K K NA +++ + +KP++++YN +I C G +++A + EM
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWK---EVRLLLNENS--LDVCSFNIIMDALCKQGLL 116
+ P TF +I+G+ + + EV ++ V +FN +++ L ++ +
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + EM GV + +YT +M GY KA + F + GL D+++Y L
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
++ CK R+ A+ + ++M +N+ N+ Y L DG R G + +A + + +M G
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 237 RPPDLTPYNIILETLCEQ--HLDKANKI---FNSLIPEPNVQSYNILISGYCKNGRVDEA 291
+ PD+ Y + + C + +++A + +L +PN+++Y LI G+ + ++A
Sbjct: 761 K-PDIHTYTSFI-SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+S Y+ M I D + L+ + R +A
Sbjct: 819 LSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 147/321 (45%), Gaps = 11/321 (3%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI 77
A +T + + A + + P IY ++IH +++A +M + GI +VT+S ++
Sbjct: 328 ARETFERMRA-RGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIV 386
Query: 78 YGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
GF A + +E +L+ + I+ A C+ + A A+ EM + G+
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
+ Y +MDGY + K +F + E G P V +Y LI Y K+ ++ +A+ +
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
M + + N TY + +G + +A+ M G + PD+ YN I+ C
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK-PDVILYNNIISAFC 565
Query: 253 EQ-HLDKA---NKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
++D+A K L P +++ +I GY K+G + ++ ++ M V
Sbjct: 566 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH 625
Query: 309 TFKLLINAFCKRKQCDKAIAL 329
TF LIN +++Q +KA+ +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEI 646
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 173/385 (44%), Gaps = 19/385 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ G K+ + A E + + N IY +I+ C+ + +A+ L EM
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAHCQTCNMERAEALVREM 440
Query: 62 IQRGIFPDVVTFSSLIYGFCH-ADQWKEV----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ GI + + +++ G+ AD+ K + RL + V ++ +++ K G +
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A V M + GV+ ++ +Y+++++G+ A +F+ M++ G+ PDV YN +
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I +C + +D A+ ++M P T+ + G + G + + M G
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAM 292
P + +N ++ L E+ ++KA +I + + N +Y ++ GY G +A
Sbjct: 621 -VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 679
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGL 346
+ + + D T++ L+ A CK + A+A+ K R+ + IL+DG
Sbjct: 680 EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 739
Query: 347 RKNG-MEEVAQRVSQLYG-ACDPDV 369
+ G + E A + Q+ PD+
Sbjct: 740 ARRGDVWEAADLIQQMKKEGVKPDI 764
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 6/257 (2%)
Query: 81 CHADQWKEVRLLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYT 139
+ D W+ V + S F +++ ++G + A M RG+ P YT
Sbjct: 289 TNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
L+ Y + +D+A M E G+ + +Y++++ G+ K + A ++
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA 259
+ NA Y + C+ + A + M G P + Y+ +++ +K
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAP-IAIYHTMMDGYTMVADEKK 467
Query: 260 NKIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
+ + E P V +Y LI+ Y K G++ +A+ + + M + + +T+ ++IN
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 316 AFCKRKQCDKAIALYKN 332
F K K A A++++
Sbjct: 528 GFVKLKDWANAFAVFED 544
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 155/304 (50%), Gaps = 14/304 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGI-FPDVVTFSSLIYG-FCHADQWKE 88
++PN I+N ++ CK+G +N A + EM + GI +P+ +T+S+L+ F H+ +
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 89 VRL---LLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
V L ++++ + D +FN++++ C+ G + A + M K G P+V +Y+ LM+
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
G+C K+ +A++ FD + + GL D Y L+ +C+ DEAM L +M
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL-CEQHLDKANKI 262
+ +TY + GL GR +A L + G + Y IIL L C L+KA K
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVH-LNKGSYRIILNALCCNGELEKAVK- 429
Query: 263 FNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
F S++ E P+ ++N L+ C++G + + + ++ +++ ++ + C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 319 KRKQ 322
K ++
Sbjct: 490 KERK 493
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 15/300 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ L+ CK+ A ++E++ + PN + Y+T++ L +A +L +
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 61 MIQR-GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNI-----IMDALCKQG 114
MI + GI PD VTF+ +I GFC A + + + +L+ + C+ N+ +M+ CK G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ EA E+ K G++ D + YT LM+ +C + D+A KL M + D +YN
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
++++G R +EA+ + + ++ + N +Y+ + + LC G L A FL+ M R
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 235 GHRPPDLTPYNIILETLCEQHLDKANK------IFNSLIPEPNVQSYNILISGYCKNGRV 288
G P T +N ++ LCE + + LIP P +S+ ++ CK ++
Sbjct: 438 GIWPHHAT-WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGP--KSWGAVVESICKERKL 494
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 163/370 (44%), Gaps = 42/370 (11%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ LM +S ++ ++ + VKP+L +T ++ L G VN ++KL
Sbjct: 126 LFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL--- 182
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
L+Y + L L N+ C FNI++ CK G + A
Sbjct: 183 ---------------LLYA--------KHNLGLQPNT---CIFNILVKHHCKNGDINFAF 216
Query: 121 AVCYEMIKRGVQ-PDVISYTILMDGYCLKCKVDKARKLF-DMMIEAGLVPDVWSYNILIQ 178
V EM + G+ P+ I+Y+ LMD + +A +LF DM+ + G+ PD ++N++I
Sbjct: 217 LVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMIN 276
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G+C+ V+ A + + M PN Y L +G C+ G++ +A + G +
Sbjct: 277 GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKL 336
Query: 239 PDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSI 294
D Y ++ C D+A K+ + + +YN+++ G GR +EA+ +
Sbjct: 337 -DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQM 395
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCPFKILMDGLR----K 348
+ + ++++++NA C + +KA+ + R + P + L +
Sbjct: 396 LDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
Query: 349 NGMEEVAQRV 358
+G E+ RV
Sbjct: 456 SGYTEIGVRV 465
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 20/321 (6%)
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFN-IIMDALCKQGLLLEAHA 121
Q+G + T+S L+ ++ V +L++ + C F + L + + H
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 122 VCYEM------IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEA-GLVPDVWSYN 174
EM I R V+P + + + ++ +V+ +RKL GL P+ +N
Sbjct: 142 KVMEMFNLIQVIAR-VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLV-PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
IL++ +CK ++ A + E+M + PN++TY L D L R +A M
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 234 RGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVD 289
+ PD +N+++ C +++A KI + + PNV +Y+ L++G+CK G++
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL---YKNNR---DLCPFKILM 343
EA + + + D+ + L+N FC+ + D+A+ L K +R D + +++
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 344 DGLRKNGMEEVAQRVSQLYGA 364
GL G E A ++ +G+
Sbjct: 381 RGLSSEGRSEEALQMLDQWGS 401
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 40/267 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TLM L S A++ +++ + + + P+ V +N +I+G C+ G V +A+K+ M
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFM 294
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQG-- 114
+ G P+V +S+L+ GFC + +E + +E LD + +M+ C+ G
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 115 -----LLLE-------AHAVCYEMIKRG---------------------VQPDVISYTIL 141
LL E A + Y +I RG V + SY I+
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
++ C +++KA K +M E G+ P ++N L+ C+ + + + L L
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+P ++ + + +C+ +L + L
Sbjct: 475 IPGPKSWGAVVESICKERKLVHVFELL 501
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y LM+G CK A QT E++ L K + V Y T+++ C++G ++A KL EM
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGL-KLDTVGYTTLMNCFCRNGETDEAMKLLGEM 364
Query: 62 IQRGIFPDVVTFSSLIYGFCHA----------DQWKEVRLLLNENSLDVCSFNIIMDALC 111
D +T++ ++ G DQW + LN+ S + II++ALC
Sbjct: 365 KASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS-----YRIILNALC 419
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
G L +A M +RG+ P ++ L+ C + ++ + GL+P
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPK 479
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLT 198
S+ +++ CK ++ L + +++
Sbjct: 480 SWGAVVESICKERKLVHVFELLDSLVS 506
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 40/334 (11%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ L ++K A+ + + + KP YN+VI L ++G K ++ +EM
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRK-CKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 65 G-IFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVC 123
G FPD +T+S+LI + +L N++++ +
Sbjct: 227 GDCFPDTITYSALISSY--------EKLGRNDSAIRLFD--------------------- 257
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
EM +QP YT L+ Y KV+KA LF+ M AG P V++Y LI+G K
Sbjct: 258 -EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH-YRGHRPPDLT 242
RVDEA +DML L P+ V L + L + GR+ + N + M +R P +
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC--TPTVV 374
Query: 243 PYNIILETLCEQ--HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQN 297
YN +++ L E H+ + + F+ + + P+ +Y+ILI GYCK RV++A+ + +
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 298 MCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
M + + LINA K K+ + A L+K
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 170/373 (45%), Gaps = 18/373 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+S K + +AI+ E++ ++P IY T++ K G V KA L EM
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKD-NCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G P V T++ LI G A + E +L + + DV N +M+ L K G +
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 117 LEAHAVCYEMIKRGVQPDVISY-TILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
E V EM P V+SY T++ + K V + FD M + P ++Y+I
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI GYCK RV++A+ L E+M K P Y L + L + R +A N L +
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY-EAANELFKELKEN 473
Query: 236 HRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
Y ++++ + L +A +FN + + P+V +YN L+SG K G ++EA
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDG 345
S+ + M D + +++N F + +AI +++ + D + L+
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 346 LRKNGMEEVAQRV 358
GM E A R+
Sbjct: 594 FAHAGMFEEAARM 606
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 162/361 (44%), Gaps = 47/361 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y TL+ K A+ +E++ P + Y +I GL K G V++A +
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAG-CSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGL 115
M++ G+ PDVV ++L+ + +E+ + +E + V S+N ++ AL +
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 116 LLEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP------ 168
+ + ++ +K V P +Y+IL+DGYC +V+KA L + M E G P
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 169 ---------------------------DVWS--YNILIQGYCKIERVDEAMNLCEDMLTK 199
+V S Y ++I+ + K ++ EA++L +M +
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK- 258
P+ Y L G+ + G + +A + L +M G R D+ +NIIL + +
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA-DINSHNIILNGFARTGVPRR 567
Query: 259 ANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
A ++F ++ +P+ +YN L+ + G +EA + + M + D+ T+ +++
Sbjct: 568 AIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILD 627
Query: 316 A 316
A
Sbjct: 628 A 628
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 6/255 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ L +SK + + + + V P+ Y+ +I G CK V KA L EM
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLL---LNENSLDVCS--FNIIMDALCKQGLL 116
++G P + SLI A +++ L L EN +V S + +++ K G L
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EM +G PDV +Y LM G +++A L M E G D+ S+NI+
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ G+ + A+ + E + + P+ VTY L G +A + M +G
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 237 RPPDLTPYNIILETL 251
+T Y+ IL+ +
Sbjct: 616 EYDAIT-YSSILDAV 629
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 8/189 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L++ L K+K A + +EL+ + +Y +I K G +++A L +EM
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKE-NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL---NENS--LDVCSFNIIMDALCKQGLL 116
+G PDV +++L+ G A E LL EN D+ S NII++ + G+
Sbjct: 506 KNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVP 565
Query: 117 LEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
A + +E IK G++PD ++Y L+ + ++A ++ M + G D +Y+
Sbjct: 566 RRAIEM-FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSS 624
Query: 176 LIQGYCKIE 184
++ ++
Sbjct: 625 ILDAVGNVD 633
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 36/328 (10%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+M +++ AI +E L PNLV +N ++ LCK V KAQ++ M R
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDL-PPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR 232
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCY 124
PD T+S L+ G+ K+ L +A V
Sbjct: 233 -FTPDSKTYSILLEGWG------------------------------KEPNLPKAREVFR 261
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EMI G PD+++Y+I++D C +VD+A + M + P + Y++L+ Y
Sbjct: 262 EMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN 321
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
R++EA++ +M + + + L C+ R+ + + L M +G P+
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV-TPNSKSC 380
Query: 245 NIILETLCEQ-HLDKANKIFNSLIP--EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
NIIL L E+ D+A +F +I EP+ +Y ++I +C+ ++ A +++ M +
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKK 440
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ TF +LIN C+ + KA L
Sbjct: 441 GVFPSMHTFSVLINGLCEERTTQKACVL 468
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 147/327 (44%), Gaps = 38/327 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S LCKSK A + + + P+ Y+ ++ G K+ + KA+++ EM
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMR--DRFTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
I G PD+VT+S I++D LCK G + EA
Sbjct: 264 IDAGCHPDIVTYS------------------------------IMVDILCKAGRVDEALG 293
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
+ M +P Y++L+ Y + ++++A F M +G+ DV +N LI +C
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
K R+ + ++M +K + PN+ + + L G +A++ +M PD
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE--PDA 411
Query: 242 TPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQN 297
Y ++++ CE + ++ A+K++ + + P++ ++++LI+G C+ +A + +
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 298 MCLRNIVRDSETFKLLINAFCKRKQCD 324
M I TF L K ++ D
Sbjct: 472 MIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 8/232 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ LCK+ A+ ++ ++ + KP IY+ ++H + + +A EM
Sbjct: 275 YSIMVDILCKAGRVDEALGIVRSMDP-SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-NSLDVC----SFNIIMDALCKQGLL 116
+ G+ DV F+SLI FC A++ K V +L E S V S NII+ L ++G
Sbjct: 334 ERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEK 393
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V +MIK +PD +YT+++ +C K +++ A K++ M + G+ P + ++++L
Sbjct: 394 DEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
I G C+ +A L E+M+ + P+ VT+ L L + R D FL
Sbjct: 453 INGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFL 503
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLC 193
+V ++ I+M Y KVD+A F++M + L P++ ++N L+ CK + V +A +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 194 EDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG-HRPPDLTPYNIILETLC 252
E+M + P++ TY L +G + LP A M G H PD+ Y+I+++ LC
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH--PDIVTYSIMVDILC 283
Query: 253 EQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
+ +D+A I S+ P +P Y++L+ Y R++EA+ + M + D
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 309 TFKLLINAFCKRKQCDKAIALYK--NNRDLCPFK-----ILMDGLRKNGMEEVAQRVSQL 361
F LI AFCK + + K ++ + P IL + + +E ++
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 362 YGACDPD 368
C+PD
Sbjct: 404 IKVCEPD 410
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 64/380 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++ + K G+ + E+E K + + +N VI+ + G + A + +M
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQ-SGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSLDVC----SFNIIMDALCKQ 113
+ G+ P T+++LI G+ A + + + L+L E ++DV +FN+++ A CK+
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYT---------------------------------- 139
+ EA V +M + GV+PD ++Y
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 140 ---ILMDGYCLKCKVDKA----RKLFDMMIEAGLVPDVWSYNILIQGYCKI---ERVDEA 189
I++ GYC + +V R++ +M +EA LV +N LI G+ ++ + +DE
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV----VFNSLINGFVEVMDRDGIDEV 317
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
+ L ++ N+ + +TY + + G + A M G +P D Y+I+ +
Sbjct: 318 LTLMKEC---NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP-DAHAYSILAK 373
Query: 250 TLCE-QHLDKANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRD 306
+ KA ++ +LI E PNV + +ISG+C NG +D+AM ++ MC + +
Sbjct: 374 GYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433
Query: 307 SETFKLLINAFCKRKQCDKA 326
+TF+ L+ + + KQ KA
Sbjct: 434 IKTFETLMWGYLEVKQPWKA 453
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 167/369 (45%), Gaps = 57/369 (15%)
Query: 45 LCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLD 99
L + G ++AQ + + + G P ++++++L+ Q+ + +++E LD
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
FN +++A + G + +A +M + G+ P +Y L+ GY + K +++ +L D
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 160 MMIEAGLV---PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL----- 211
+M+E G V P++ ++N+L+Q +CK ++V+EA + + M + P+ VTY +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 212 --------------------------------FDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
G CR GR+ D F+ RM
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM-RVEA 293
Query: 240 DLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQ----SYNILISGYCKNGRVDEAMSI 294
+L +N ++ E D +++ +L+ E NV+ +Y+ +++ + G +++A +
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVL-TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 352
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL-----YKNNRDLCPFKILMDGLRKN 349
++ M + D+ + +L + + K+ KA L ++ ++ F ++ G N
Sbjct: 353 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSN 412
Query: 350 GMEEVAQRV 358
G + A RV
Sbjct: 413 GSMDDAMRV 421
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L G ++K A + L+ L + +PN+VI+ TVI G C +G ++ A ++ ++M
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETL--IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKM 425
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQ-WKEVRLL 92
+ G+ P++ TF +L++G+ Q WK +L
Sbjct: 426 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 162/340 (47%), Gaps = 17/340 (5%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L++ L K+ S + + E + + VK + ++ ++ C +GL +A + +EM ++
Sbjct: 314 LITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK 373
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLLLEA 119
GI + + +++L+ + ++ +EV L E ++NI+MDA ++
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKV-DKARKLFDMMIEAGLVPDVWSYNILIQ 178
+ EM G++P+V SYT L+ Y K+ D A F M + GL P SY LI
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR---FGRLPDAWNFLTRMHYRG 235
Y ++A E+M + + P+ TY + D R G+L + W + R +G
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 236 HRPPDLTPYNIILETLCEQHLD-KANKI---FNSLIPEPNVQSYNILISGYCKNGRVDEA 291
R YN +L+ +Q L +A + F+ + +P+V +YN+L++ Y + G+ +
Sbjct: 554 TR----ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKL 609
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ + M N+ DS T+ +I AF + + +A +K
Sbjct: 610 PQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 138/315 (43%), Gaps = 19/315 (6%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIY-----GFCHADQWKE 88
++ +YN I GL + A ++ M + ++PD VT + LI G + W E
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVW-E 330
Query: 89 VRLLLNENSLDVCS--FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ ++E + F ++ + C +GL EA + EM K+G++ + I Y LMD Y
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+++ LF M + GL P +YNIL+ Y + + D L +M L PN
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 207 TYKYLFDGLCRFGRLPD-AWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
+Y L R ++ D A + RM G +P + +I +KA F
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+ E P+V++Y ++ + ++G + M I++ M I T+ L++ F K+
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ-- 568
Query: 323 CDKAIALYKNNRDLC 337
LY RD+
Sbjct: 569 -----GLYIEARDVV 578
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA------- 83
+KP+ Y +IH G KA EM + GI P V T++S++ F +
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 84 DQWKEVRLLLNENSLDV-CSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ WK L+L E ++N ++D KQGL +EA V E K G+QP V++Y +LM
Sbjct: 541 EIWK---LMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLM 597
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
+ Y + K +L M L PD +Y+ +I + ++ A + M+ V
Sbjct: 598 NAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQV 657
Query: 203 PNAVTYKYL 211
P+ +Y+ L
Sbjct: 658 PDPRSYEKL 666
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 19/259 (7%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEAL------QLVKPNLVIYNTVIHGLCKDGLVNKA 54
+Y TLM KS ++E+E L + +KP+ YN ++ + +
Sbjct: 381 VYNTLMDAYNKS-------NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 55 QKLCSEMIQRGIFPDVVTFSSLIYGFCH----ADQWKEVRLLLNENSLDVCS--FNIIMD 108
+ L EM G+ P+V +++ LI + +D + L + + L S + ++
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 109 ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
A G +A+A EM K G++P V +YT ++D + K +++ +M+ +
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+YN L+ G+ K EA ++ + L P+ +TY L + R G+ L
Sbjct: 554 TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 229 TRMHYRGHRPPDLTPYNII 247
M +P +T +I
Sbjct: 614 KEMAALNLKPDSITYSTMI 632
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 14/296 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ L ++K G AI L + +PN V YN +IH + +N+A + ++M
Sbjct: 367 YTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 62 IQRGIFPDVVTFSSLI-----YGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G PD VT+ +LI GF R+ S D ++++I++ L K G L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
AH + EM+ +G P++++Y I+MD + A KL+ M AG PD +Y+I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 177 IQ--GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
++ G+C ++EA + +M KN +P+ Y L D + G + AW + M +
Sbjct: 546 MEVLGHCGY--LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 235 GHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G RP T +++ L + +A ++ +++ P++Q+Y +L+S C +GR
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 17/231 (7%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EM++ G QP+ ++Y L+ Y +++A +F+ M EAG PD +Y LI + K
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
+D AM++ + M L P+ TY + + L + G LP A M +G P +L Y
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP-NLVTY 507
Query: 245 NIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILIS--GYCKNGRVDEAMSIYQNM 298
NI+++ + ++ A K++ + EP+ +Y+I++ G+C G ++EA +++ M
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEM 565
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKN 349
+N + D + LL++ + K +KA Y+ +L GLR N
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ--------AMLHAGLRPN 608
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G + D +YT ++ + KL D M+ G P+ +YN LI Y + ++EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
MN+ M P+ VTY L D + G L A + RM G P T Y++I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT-YSVIIN 477
Query: 250 TLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
L + HL A+K+F ++ + PN+ +YNI++ + K A+ +Y++M
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 306 DSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKNGMEEVAQRVS 359
D T+ +++ ++A A++ ++ P + +L+D K G E A +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 360 Q--LYGACDPDV 369
Q L+ P+V
Sbjct: 598 QAMLHAGLRPNV 609
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 16/297 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ L ++K G AI L + +PN V YN +IH + +N+A + ++M
Sbjct: 367 YTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 62 IQRGIFPDVVTFSSLI-----YGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G PD VT+ +LI GF R+ S D ++++I++ L K G L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
AH + EM+ +G P++++Y I+MD + A KL+ M AG PD +Y+I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 177 IQ--GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
++ G+C ++EA + +M KN +P+ Y L D + G + AW + M +
Sbjct: 546 MEVLGHCGY--LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 235 GHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G R P++ N +L T + +A ++ +++ P++Q+Y +L+S C +GR
Sbjct: 604 GLR-PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 17/231 (7%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EM++ G QP+ ++Y L+ Y +++A +F+ M EAG PD +Y LI + K
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
+D AM++ + M L P+ TY + + L + G LP A M +G P +L Y
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP-NLVTY 507
Query: 245 NIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILIS--GYCKNGRVDEAMSIYQNM 298
NI+++ + ++ A K++ + EP+ +Y+I++ G+C G ++EA +++ M
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEM 565
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKN 349
+N + D + LL++ + K +KA Y+ +L GLR N
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ--------AMLHAGLRPN 608
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G + D +YT ++ + KL D M+ G P+ +YN LI Y + ++EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
MN+ M P+ VTY L D + G L A + RM G P T Y++I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT-YSVIIN 477
Query: 250 TLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
L + HL A+K+F ++ + PN+ +YNI++ + K A+ +Y++M
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 306 DSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKNGMEEVAQRVS 359
D T+ +++ ++A A++ ++ P + +L+D K G E A +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 360 Q--LYGACDPDV 369
Q L+ P+V
Sbjct: 598 QAMLHAGLRPNV 609
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 150/297 (50%), Gaps = 16/297 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ L ++K G AI L + +PN V YN +IH + +N+A + ++M
Sbjct: 367 YTTMVGNLGRAKQFG-AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 62 IQRGIFPDVVTFSSLI-----YGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G PD VT+ +LI GF R+ S D ++++I++ L K G L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
AH + EM+ +G P++++Y I+MD + A KL+ M AG PD +Y+I+
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 177 IQ--GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
++ G+C ++EA + +M KN +P+ Y L D + G + AW + M +
Sbjct: 546 MEVLGHCGY--LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 235 GHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGR 287
G R P++ N +L T + +A ++ +++ P++Q+Y +L+S C +GR
Sbjct: 604 GLR-PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 117/231 (50%), Gaps = 17/231 (7%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EM++ G QP+ ++Y L+ Y +++A +F+ M EAG PD +Y LI + K
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
+D AM++ + M L P+ TY + + L + G LP A M +G P +L Y
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP-NLVTY 507
Query: 245 NIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILIS--GYCKNGRVDEAMSIYQNM 298
NI+++ + ++ A K++ + EP+ +Y+I++ G+C G ++EA +++ M
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEM 565
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKN 349
+N + D + LL++ + K +KA Y+ +L GLR N
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ--------AMLHAGLRPN 608
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 13/252 (5%)
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
G + D +YT ++ + KL D M+ G P+ +YN LI Y + ++EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
MN+ M P+ VTY L D + G L A + RM G P T Y++I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT-YSVIIN 477
Query: 250 TLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
L + HL A+K+F ++ + PN+ +YNI++ + K A+ +Y++M
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 306 DSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKNGMEEVAQRVS 359
D T+ +++ ++A A++ ++ P + +L+D K G E A +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 360 Q--LYGACDPDV 369
Q L+ P+V
Sbjct: 598 QAMLHAGLRPNV 609
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 173/393 (44%), Gaps = 55/393 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P+ YN +I+ G +A ++C +M G+ PD+VT + ++ + Q+ +
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 91 LLLN-----ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ--PDVISYTILMD 143
+ D +FNII+ L K G +A + M ++ + PDV+++T +M
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
Y +K +++ R +F+ M+ GL P++ SYN L+ Y A+++ D+ ++P
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKI 262
+ V+Y L + R R P + M + R P++ YN +++ L +A +I
Sbjct: 257 DVVSYTCLLNSYGR-SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 263 FNSLIPE---PNVQS-----------------------------------YNILISGYCK 284
F + + PNV S YN I Y
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLC------P 338
+++A+++YQ+M + + DS TF +LI+ C+ + +AI+ K DL
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 435
Query: 339 FKILMDGLRKNGMEEVAQRV-SQL-YGACDPDV 369
+ ++ K G A+ + +Q+ C+PDV
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 31/349 (8%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ---WK 87
+KPN+V YN ++ G+ A + ++ Q GI PDVV+++ L+ + + Q K
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 88 EVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
EV L++ + +V ++N ++DA G L EA + +M + G++P+V+S L+
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA- 337
Query: 146 CLKCKVDKARKLFDMMIEA----GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
C K + D ++ A G+ + +YN I Y +++A+ L + M K +
Sbjct: 338 ---CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKAN 260
++VT+ L G CR + P+A ++L M P Y+ +L +Q + +A
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI-PLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 261 KIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
IFN + EP+V +Y ++ Y + + +A ++ M I DS L+ AF
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 318 CKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACD 366
K Q +LMD +R+ + +++ AC+
Sbjct: 514 NKGGQPSNVF-------------VLMDLMREKEIPFTGAVFFEIFSACN 549
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 147/328 (44%), Gaps = 47/328 (14%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
IYN +I + V++A+ L EM + PD T+ +LI A QW+ L+++
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 97 -----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
+ ++N +++A G EA VC +M GV PD++++ I++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
KA F++M A + PD ++NI+I K+ + +A++L M K
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR----------- 181
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE-- 269
CR PD F + MH Y++ + ++ +F +++ E
Sbjct: 182 --AECR----PDVVTFTSIMHL----------YSV------KGEIENCRAVFEAMVAEGL 219
Query: 270 -PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
PN+ SYN L+ Y +G A+S+ ++ I+ D ++ L+N++ + +Q KA
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 329 LY------KNNRDLCPFKILMDGLRKNG 350
++ + ++ + L+D NG
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNG 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
TL++ +SK N L ++ + + N YN+ I + KA L M +
Sbjct: 333 TLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 391
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGLLLE 118
+ + D VTF+ LI G C ++ E L E L ++ ++ A KQG + E
Sbjct: 392 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 451
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A ++ +M G +PDVI+YT ++ Y K KA +LF M G+ PD + + L++
Sbjct: 452 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 511
Query: 179 GYCK 182
+ K
Sbjct: 512 AFNK 515
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 173/393 (44%), Gaps = 55/393 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+ P+ YN +I+ G +A ++C +M G+ PD+VT + ++ + Q+ +
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 91 LLLN-----ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ--PDVISYTILMD 143
+ D +FNII+ L K G +A + M ++ + PDV+++T +M
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
Y +K +++ R +F+ M+ GL P++ SYN L+ Y A+++ D+ ++P
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKI 262
+ V+Y L + R R P + M + R P++ YN +++ L +A +I
Sbjct: 389 DVVSYTCLLNSYGR-SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 263 FNSLIPE---PNVQS-----------------------------------YNILISGYCK 284
F + + PNV S YN I Y
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLC------P 338
+++A+++YQ+M + + DS TF +LI+ C+ + +AI+ K DL
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 339 FKILMDGLRKNGMEEVAQRV-SQL-YGACDPDV 369
+ ++ K G A+ + +Q+ C+PDV
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 31/349 (8%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ---WK 87
+KPN+V YN ++ G+ A + ++ Q GI PDVV+++ L+ + + Q K
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 88 EVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
EV L++ + +V ++N ++DA G L EA + +M + G++P+V+S L+
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA- 469
Query: 146 CLKCKVDKARKLFDMMIEA----GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
C K + D ++ A G+ + +YN I Y +++A+ L + M K +
Sbjct: 470 ---CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKAN 260
++VT+ L G CR + P+A ++L M P Y+ +L +Q + +A
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI-PLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 261 KIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
IFN + EP+V +Y ++ Y + + +A ++ M I DS L+ AF
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Query: 318 CKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGACD 366
K Q +LMD +R+ + +++ AC+
Sbjct: 646 NKGGQPSNVF-------------VLMDLMREKEIPFTGAVFFEIFSACN 681
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 47/329 (14%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
IYN +I + V++A+ L EM + PD T+ +LI A QW+ L+++
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 97 -----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
+ ++N +++A G EA VC +M GV PD++++ I++ Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
KA F++M A + PD ++NI+I K+ + +A++L M K
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR----------- 313
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE-- 269
CR PD F + MH Y++ + ++ +F +++ E
Sbjct: 314 --AECR----PDVVTFTSIMHL----------YSV------KGEIENCRAVFEAMVAEGL 351
Query: 270 -PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
PN+ SYN L+ Y +G A+S+ ++ I+ D ++ L+N++ + +Q KA
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 329 LY------KNNRDLCPFKILMDGLRKNGM 351
++ + ++ + L+D NG
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
TL++ +SK N L ++ + + N YN+ I + KA L M +
Sbjct: 465 TLLAACSRSKKKVNVDTVLSAAQS-RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK 523
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGLLLE 118
+ + D VTF+ LI G C ++ E L E L ++ ++ A KQG + E
Sbjct: 524 KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 583
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A ++ +M G +PDVI+YT ++ Y K KA +LF M G+ PD + + L++
Sbjct: 584 AESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR 643
Query: 179 GYCK 182
+ K
Sbjct: 644 AFNK 647
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 16/272 (5%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
+YN+++H LC + + A L MI++G+ PD T++ L+ G+C A + KE + L+E
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 97 SLDVCSFN-------IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
S FN ++++ L G L A + +M K G PD+ ++ IL++
Sbjct: 244 SRR--GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+V+ +++ + GL D+ +Y LI KI ++DEA L + + P Y
Sbjct: 302 EVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYA 361
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC---EQHLDKANKI--FN 264
+ G+CR G DA++F + M + H PP+ Y +++ T+C + +D AN +
Sbjct: 362 PIIKGMCRNGMFDDAFSFFSDMKVKAH-PPNRPVYTMLI-TMCGRGGKFVDAANYLVEMT 419
Query: 265 SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQ 296
+ P + ++++ G G+ D AM I Q
Sbjct: 420 EMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y +L+ LC K A ++ + + +KP+ Y +++G C G + +AQ+ E
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRM-IRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDE 242
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGL 115
M +RG P LI G +A + + ++++ + D+ +FNI+++A+ K G
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ + Y K G+ D+ +Y L+ K+D+A +L + +E G P Y
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+I+G C+ D+A + DM K PN Y L R G+ DA N+L M G
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 236 HRP 238
P
Sbjct: 423 LVP 425
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 10/222 (4%)
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEA-GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT 198
+++ Y VD+A +LF+ + + G V YN L+ C ++ A L M+
Sbjct: 151 FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK 258
K L P+ TY L +G C G++ +A FL M RG PP +I L +L+
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 259 ANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
A ++ + + P++Q++NILI K+G V+ + +Y C + D +T+K LI
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330
Query: 316 AFCKRKQCDKAIALYKN--NRDLCPFKIL----MDGLRKNGM 351
A K + D+A L N PF L + G+ +NGM
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGM 372
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 29/279 (10%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQL-----VKPNLVIYNTVIHGLCKDGLVNKAQ 55
+Y TLM G K+ G T + LEA++ P+ V Y TV+ GL+++A+
Sbjct: 416 IYTTLMKGYMKN---GRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 56 KLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS------LDVCSFNIIMDA 109
++ +EM + G+ + +T++ L+ G+C Q LL E + DV S+NII+D
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 110 LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD-MMIEAGLVP 168
A A EM RG+ P ISYT LM + + + A ++FD MM + +
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
D+ ++N+L++GYC++ +++A + M PN TY L +G+ + + DA
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLW 652
Query: 229 TRMHYR--------------GHRPPDLTPYNIILETLCE 253
+ R PP L P +L+TL +
Sbjct: 653 KEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLAD 691
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 137/320 (42%), Gaps = 73/320 (22%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ---RGIFPDVVTFSSLIYGFCHADQ 85
++ P+ IY T++ G K+G V ++ M + R PD VT+++++ F +A
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA-- 465
Query: 86 WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
GL+ A V EM + GV + I+Y +L+ GY
Sbjct: 466 ----------------------------GLMDRARQVLAEMARMGVPANRITYNVLLKGY 497
Query: 146 CLKCKVDKARKLFDMMIE-AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
C + ++D+A L M E AG+ PDV SYNI+I G I+ A+ +M T+ + P
Sbjct: 498 CKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPT 557
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFN 264
++Y L G+ P L AN++F+
Sbjct: 558 KISYTTLMKAFAMSGQ------------------PKL-----------------ANRVFD 582
Query: 265 SLIPEPNVQ----SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
++ +P V+ ++N+L+ GYC+ G +++A + M + T+ L N +
Sbjct: 583 EMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Query: 321 KQCDKAIALYKNNRDLCPFK 340
++ A+ L+K ++ C K
Sbjct: 643 RKPGDALLLWKEIKERCAVK 662
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 155/386 (40%), Gaps = 61/386 (15%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P+ +N V++ G +K KL EM + PDV+T++ +I C KE+ +
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMI-KLCARVGRKELIV 291
Query: 92 LLNENSLD----VC--SFNIIMDALCKQGLLLEAHAVCYEMIKR---------------- 129
+ E +D VC + + ++ A G L A + M ++
Sbjct: 292 FVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDL 351
Query: 130 -------GVQPDVISYTILMDGYCLKCKV------DKARKLF----DMMIEAGLVPDVWS 172
+ GY + +V D +KL D E L+P V++
Sbjct: 352 KEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFA 411
Query: 173 -----YNILIQGYCKIERVDEAMNLCEDMLT---KNLVPNAVTYKYLFDGLCRFGRLPDA 224
Y L++GY K RV + + E M +N P+ VTY + G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 225 WNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP----EPNVQSYNILI 279
L M G P + YN++L+ C+Q +D+A + + EP+V SYNI+I
Sbjct: 472 RQVLAEMARMGV-PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 280 SGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY-------KN 332
G A++ + M R I ++ L+ AF Q A ++ +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 333 NRDLCPFKILMDGLRKNGMEEVAQRV 358
DL + +L++G + G+ E AQRV
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRV 616
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 12/292 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+S + A++ +++EA +P+L YN +I + GL +A++L E+
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEA-HRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 62 IQRGIFPDVVTFSSLIYGFC---HADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLL 116
+G FPD VT++SL+Y F + ++ KEV + + D ++N I+ KQG L
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 117 LEAHAVCYEMIK-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
A + +M G PD I+YT+L+D + +A L M++ G+ P + +Y+
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI GY K + +EA + ML P+ + Y + D L R AW M G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 236 HRPPDLTPYNIILETLCEQH----LDKANKIFNSLIPEPNVQSYNILISGYC 283
H P T Y +++ L +++ + K + L ++ ++L+ G C
Sbjct: 539 H-TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC 589
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 81/342 (23%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
+YN ++ + G +KAQ+L M QRG PD++
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLI------------------------- 261
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAV-CYEMIK-RGVQPDVISYTILMDGYCLKCKVDKA 154
SFN +++A K G L AV +M++ G++PD I+Y L+ +D A
Sbjct: 262 -----SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
K+F+ M PD+W+YN +I Y + EA L ++ K P+AVTY L
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 215 LCR------------------FGRLPDAWNFLTRMHYR-----------------GHRPP 239
R FG+ +N + M+ + R P
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 240 DLTPYNIILETLCEQHLDKANKIFN--SLIPE-------PNVQSYNILISGYCKNGRVDE 290
D Y +++++ L KAN+ +L+ E P +Q+Y+ LI GY K G+ +E
Sbjct: 437 DAITYTVLIDS-----LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
A + M D+ + ++++ + + KA LY++
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRD 533
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 57/353 (16%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
+Y +I K L KA+ + + Q G PD+ T++SL+ + ++ R + N
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 97 SLD-----VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
D V S NI++ ALC G L E + V E+ G + S +++D + +
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL-VPNAVTYKY 210
+ +K++ M AG +P + Y ++I+ CK +RV +A + +M N V A+
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI---- 929
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP-- 268
WN + +M+ T E + K +++ +
Sbjct: 930 --------------WNSMLKMY-----------------TAIEDY-KKTVQVYQRIKETG 957
Query: 269 -EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDS--ETFKLLINAFCKRKQCDK 325
EP+ +YN LI YC++ R +E + Q M RN+ D +T+K LI+AF K+K ++
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQM--RNLGLDPKLDTYKSLISAFGKQKCLEQ 1015
Query: 326 AIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRVSQLY--GACDPDVA 370
A L++ D + +M R +G + A+++ Q+ +P +A
Sbjct: 1016 AEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLA 1068
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 127/292 (43%), Gaps = 21/292 (7%)
Query: 85 QWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
+W +R + N+ V + ++ ++ L +E + VQ Y +M
Sbjct: 179 EWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ----VYNAMMGV 234
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDE--AMNLCEDMLTKNLV 202
Y K KA++L D M + G VPD+ S+N LI K + A+ L + + L
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR-PPDLTPYNIILETLCEQHLD-KAN 260
P+A+TY L R L A M HR PDL YN ++ L +A
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDME--AHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 261 KIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
++F L + P+ +YN L+ + + ++ +YQ M +D T+ +I+ +
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 318 CKRKQCDKAIALYKN-------NRDLCPFKILMDGLRK-NGMEEVAQRVSQL 361
K+ Q D A+ LYK+ N D + +L+D L K N E A +S++
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P + N ++H LC DG + + + E+ G + ++ F A EV+ +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 93 LNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ + + ++++ LCK + +A + EM + + ++ + ++ Y
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
K +++ + E GL PD +YN LI YC+ R +E L + M L P T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLD-KANKIF--- 263
YK L + L A + +G + D + Y+ +++ + D KA K+
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLK-LDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Query: 264 -NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
N+ I EP + + ++L+ Y +G EA + N+ + + + +I+A+ + K
Sbjct: 1059 KNAGI-EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 323 CDKAI 327
+ I
Sbjct: 1118 YNSGI 1122
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 11/272 (4%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
FNI+++ + L +A + EM V+P V++Y L++GYC +V A ++ + M
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
A + + +N +I G + R+ EA+ + E P VTY L C+ G LP
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNIL 278
A L M RG P T YN + + + ++ ++ LI P+ +Y+++
Sbjct: 373 GASKILKMMMTRG-VDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 279 ISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDL 336
+ C++G++ AM + + M R I D T +LI+ C+ + ++A + N R +
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 337 CP----FKILMDGLRKNGMEEVAQRVSQLYGA 364
P FK++ +GLR GM ++A+R+S L +
Sbjct: 492 IPQYITFKMIDNGLRSKGMSDMAKRLSSLMSS 523
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ L++G +S+ A + +E++A+ VKP +V Y T+I G C+ V A ++ E
Sbjct: 252 IFNILLNGWFRSRKLKQAEKLWEEMKAMN-VKPTVVTYGTLIEGYCRMRRVQIAMEVLEE 310
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGL 115
M + + + F+ +I G A + E R + E+ + ++N ++ CK G
Sbjct: 311 MKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGD 370
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A + M+ RGV P +Y + K ++ L+ +IEAG PD +Y++
Sbjct: 371 LPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHL 430
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+++ C+ ++ AM + ++M + + P+ +T L LCR L +A+ RG
Sbjct: 431 ILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRG 490
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
P +T + +I L + + K +SL+
Sbjct: 491 IIPQYIT-FKMIDNGLRSKGMSDMAKRLSSLM 521
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 36/323 (11%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG ++ LC+ + + A + + +++ L KP YN +IHGLCKDG +A +L E
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGL-KPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+ FP T+ ++M++LCK+ +A
Sbjct: 369 SEFEFFPSEYTY------------------------------KLLMESLCKELDTGKARN 398
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
V M+++ Y I + G C+ + + M++ PD ++ N +I G C
Sbjct: 399 VLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLC 458
Query: 182 KIERVDEAMNLCEDMLT-KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
K+ RVD+AM + +DM+T K P+AVT + GL GR +A + L R+ P
Sbjct: 459 KMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPG 518
Query: 241 LTPYNIILETLCEQHL-DKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
+ YN ++ L + H D+A +F L + +Y I+I G C +VD A +
Sbjct: 519 VVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWD 578
Query: 297 NMCLRNIVRDSETFKLLINAFCK 319
++ + D+ + + C+
Sbjct: 579 DVIWPSGRHDAFVYAAFLKGLCQ 601
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 166/378 (43%), Gaps = 27/378 (7%)
Query: 17 NAIQTLQELEALQL--VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDV---- 70
N + L+ L+ L L +P+ + ++VIH LC G ++A + + G PD
Sbjct: 70 NPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN 129
Query: 71 VTFSSLIYGFCHADQWKEVRLLLN---ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMI 127
V + L+Y + L+ E + ++N +M+ LC +++AH + ++M
Sbjct: 130 VIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189
Query: 128 KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVD 187
RG PDV+++T L+ GYC +++ A K+FD M G+ P+ + ++LI G+ K+ V+
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 188 EAMNLCEDMLT--KNLVPN---AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
L +++ KN A + L D +CR G D + M +
Sbjct: 250 TGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA 309
Query: 243 PYNIILETLCEQHLDKANK----IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
Y ++++LC + I S +P SYN +I G CK+G A + +
Sbjct: 310 -YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKA-----IALYKNNRDLCP-FKILMDGL--RKNG 350
T+KLL+ + CK KA + L K D + I + GL N
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 351 MEEVAQRVSQLYGACDPD 368
E + VS L G C PD
Sbjct: 429 TEILNVLVSMLQGDCRPD 446
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 152/385 (39%), Gaps = 85/385 (22%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P++V + T+I G C+ + A K+ EM GI P+ +T S LI GF + R L
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL 254
Query: 93 LNE----------NSLDVCSFNIIMDALCKQGLLLE------------------------ 118
+ E S+ +F ++D++C++G +
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMI 314
Query: 119 -----------AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV 167
A + Y M +G++P SY ++ G C +A +L + E
Sbjct: 315 DSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFF 374
Query: 168 PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV------------------------- 202
P ++Y +L++ CK +A N+ E ML K
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 203 ----------PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
P+ T + +GLC+ GR+ DA L M PD N ++ L
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLL 494
Query: 253 EQ-HLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDS 307
Q ++A + N ++PE P V +YN +I G K + DEAMS++ + ++ DS
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 308 ETFKLLINAFCKRKQCDKAIALYKN 332
T+ ++I+ C + D A + +
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDD 579
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIF--PDVVTFSSLIYGFCHADQWKEV 89
+P+ NTVI+GLCK G V+ A K+ +M+ G F PD VT ++++ G + +E
Sbjct: 444 RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT-GKFCAPDAVTLNTVMCGLLAQGRAEEA 502
Query: 90 RLLLN----ENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
+LN EN + V ++N ++ L K EA +V ++ K V D +Y I++D
Sbjct: 503 LDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIID 562
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
G C+ KVD A+K +D +I D + Y ++G C+ + +A + D+ +P
Sbjct: 563 GLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIP 622
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
N V Y + R G +A+ L M G P +T
Sbjct: 623 NVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 131/319 (41%), Gaps = 40/319 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y LM LCK +G A L EL + IYN + GLC + + M
Sbjct: 380 YKLLMESLCKELDTGKARNVL-ELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVCSFNIIMDALCKQGL 115
+Q PD T +++I G C + + +L++ + D + N +M L QG
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 116 LLEAHAVCYE-MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
EA V M + ++P V++Y ++ G K D+A +F + +A + D +Y
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYA 558
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
I+I G C +VD A +D++ + +A Y GLC+ G L DA +FL
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY----- 613
Query: 235 GHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSI 294
DL I PNV YN +I+ ++G EA I
Sbjct: 614 -----DLADSGAI----------------------PNVVCYNTVIAECSRSGLKREAYQI 646
Query: 295 YQNMCLRNIVRDSETFKLL 313
+ M D+ T+++L
Sbjct: 647 LEEMRKNGQAPDAVTWRIL 665
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 162/370 (43%), Gaps = 75/370 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++S L + + + A L+ +P++++Y ++ G C+ G +++A+K+ EM
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSLK--DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
GI P+V T+S I++DALC+ G + AH
Sbjct: 282 KLAGIEPNVYTYS------------------------------IVIDALCRCGQISRAHD 311
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
V +M+ G P+ I++ LM + + +K ++++ M + G PD +YN LI+ +C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ E ++ A+ + M+ K NA T+ +F R+ N RM
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIF----RYIEKKRDVNGAHRM---------- 417
Query: 242 TPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
Y+ ++E C EPN +YNIL+ + + D + + + M +
Sbjct: 418 --YSKMMEAKC----------------EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK 459
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYKN-------NRDLCPFKILMDGLRKNGM--- 351
+ + T++LL+ FC + A L+K L +++++ LR+ G
Sbjct: 460 EVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKK 519
Query: 352 -EEVAQRVSQ 360
EE+ +++ Q
Sbjct: 520 HEELVEKMIQ 529
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 127/256 (49%), Gaps = 6/256 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+ G C++ A + +E++ L ++PN+ Y+ VI LC+ G +++A + ++
Sbjct: 257 VYTNLVRGWCRAGEISEAEKVFKEMK-LAGIEPNVYTYSIVIDALCRCGQISRAHDVFAD 315
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGL 115
M+ G P+ +TF++L+ A + ++V + N+ D ++N +++A C+
Sbjct: 316 MLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
L A V MIK+ + + ++ + K V+ A +++ M+EA P+ +YNI
Sbjct: 376 LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
L++ + + D + + ++M K + PN TY+ L C G +A+ M
Sbjct: 436 LMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEK 495
Query: 236 HRPPDLTPYNIILETL 251
P L+ Y ++L L
Sbjct: 496 CLTPSLSLYEMVLAQL 511
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M R V+ + ++TIL+ Y +A F+ M + G VPD +++I+I + R
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
EA + D L P+ + Y L G CR G + +A M G
Sbjct: 237 ASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAG---------- 285
Query: 246 IILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
EPNV +Y+I+I C+ G++ A ++ +M
Sbjct: 286 ----------------------IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
Query: 306 DSETFKLLINAFCKRKQCDKAIALYKNNRDL 336
++ TF L+ K + +K + +Y + L
Sbjct: 324 NAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 148/314 (47%), Gaps = 17/314 (5%)
Query: 9 LCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP 68
L K+ A+ L ++ L+ P ++YN +I G+CK+G ++ KL EM G+ P
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLI-PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 69 DVVTFSSLIYG-------FCHA-DQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
T + IYG F A D K++R E + +F ++ LC+ G ++A
Sbjct: 508 SQFTLNC-IYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDAC 564
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
++ G +++ T +DG VD+ +LF + G PDV +Y++LI+
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKAL 624
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
CK R EA L +M++K L P TY + DG C+ G + + + RM Y + PD
Sbjct: 625 CKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM-YEDEKNPD 683
Query: 241 LTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQ 296
+ Y ++ LC +A +N + + PN ++ LI G CK G EA+ ++
Sbjct: 684 VITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFR 743
Query: 297 NMCLRNIVRDSETF 310
M + + DS +
Sbjct: 744 EMEEKEMEPDSAVY 757
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 39/306 (12%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELE--------------------------ALQLVK-- 32
MY ++ G+CK S +++ L E++ AL L+K
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Query: 33 ------PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH---A 83
P + ++ LC++G A K ++ G +V ++ I G
Sbjct: 536 RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGV 595
Query: 84 DQWKEV--RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
D+ E+ + N + DV ++++++ ALCK +EA + EM+ +G++P V +Y +
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+DG+C + ++D+ M E PDV +Y LI G C R EA+ +M K+
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
PN +T+ L GLC+ G +A + M + P +++ L ++++
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 262 IFNSLI 267
IF ++
Sbjct: 776 IFREMV 781
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 180/436 (41%), Gaps = 72/436 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ G K A Q +++ + + ++ +Y+ +I GLCK + A L E+
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGM-NADIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL----NENSLDVCSFNIIMDALCKQGLLL 117
+ GI PD L+ F + + ++ ++ S+ + + + + + L+
Sbjct: 345 KRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV-MLLYKSLFEGFIRNDLVH 403
Query: 118 EAHAV------------CYEMIK------RGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
EA++ E++K + + PD S +I+++ KVD A L
Sbjct: 404 EAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLH 463
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
+++ GL+P YN +I+G CK R +E++ L +M + P+ T ++ L
Sbjct: 464 DIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC 523
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ--------------------HLDKA 259
A + L +M + G P + +++ LCE H+ +
Sbjct: 524 DFVGALDLLKKMRFYGFEPW-IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 260 NKIFNSLIPE-------------------PNVQSYNILISGYCKNGRVDEAMSIYQNMCL 300
+ LI P+V +Y++LI CK R EA ++ M
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVS 642
Query: 301 RNIVRDSETFKLLINAFCKRKQCDKAIA----LYKN--NRDLCPFKILMDGLRKNGM-EE 353
+ + T+ +I+ +CK + D+ ++ +Y++ N D+ + L+ GL +G E
Sbjct: 643 KGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSE 702
Query: 354 VAQRVSQLYGA-CDPD 368
R +++ G C P+
Sbjct: 703 AIFRWNEMKGKDCYPN 718
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ LC++ + +A + L ++ + ++V I GL K+ V++ +L ++
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLG-HMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLLLEA 119
G PDV+ + LI C A + E +L NE V ++N ++D CK+G +
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ M + PDVI+YT L+ G C + +A ++ M P+ ++ LIQG
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
CK EA+ +M K + P++ Y L + + M ++G P
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 155/374 (41%), Gaps = 66/374 (17%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCKD--GLVNKAQKLCSEMIQRGIFPDVVTFSS 75
A + + L PN YN ++ + K V + EM G D T +
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTP 219
Query: 76 LIYGFCHADQWKEVRLLLNE----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGV 131
++ +C+ + + + NE LD I++ + CK G + +A + + +R +
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDI 279
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
+ + +Y +L+ G+ + ++DKA +LF+ M G+ D+ Y++LI G CK + ++ A++
Sbjct: 280 RLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALS 339
Query: 192 LCEDMLTKNLVPN---------------------------------AVTYKYLFDGLCRF 218
L ++ + P+ + YK LF+G R
Sbjct: 340 LYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRN 399
Query: 219 GRLPDAWNFLTRMH--------------YRGHRP---PDLTPYNIILETLCEQH-LDKAN 260
+ +A++F+ + + H PD +I++ L + + +D A
Sbjct: 400 DLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAV 459
Query: 261 KIF-----NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
+ N LIP P + YN +I G CK GR +E++ + M ++ + F L
Sbjct: 460 TLLHDIVQNGLIPGPMM--YNNIIEGMCKEGRSEESLKLLGEM--KDAGVEPSQFTLNCI 515
Query: 316 AFCKRKQCDKAIAL 329
C ++CD AL
Sbjct: 516 YGCLAERCDFVGAL 529
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 6/212 (2%)
Query: 6 MSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG 65
+ GL K++G ++ +++ A P+++ Y+ +I LCK +A L +EM+ +G
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 66 IFPDVVTFSSLIYGFCHADQWKE-----VRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
+ P V T++S+I G+C + VR+ +E + DV ++ ++ LC G EA
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
EM + P+ I++ L+ G C +A F M E + PD Y L+ +
Sbjct: 705 FRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSF 764
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
E ++ + +M+ K P +V Y+
Sbjct: 765 LSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 46/239 (19%)
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
+ G D+++YN + + + L D+L + + + L G +
Sbjct: 99 QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVD 158
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETL--------------------CEQHLDK---- 258
+A + R+ G P+ YN +LE + C H DK
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLT 218
Query: 259 --------------ANKIFNSLIPEPNVQSY--NILISGYCKNGRVDEAMSIYQNMCLRN 302
A +FN ++ + + IL+ +CK G+VD+A + + + R+
Sbjct: 219 PVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
I + +T+ +LI+ F K + DKA L++ N D+ + +L+ GL K+ E+A
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMA 337
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 153/321 (47%), Gaps = 42/321 (13%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE----- 88
N+V YNT++ L K +V+KA ++ S M++ G P+ T+S L+ Q
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 89 ---------------VRLLLNENSL--------DVCSFNI---------IMDALCKQGLL 116
VR L + D+ SF + ++++LC G
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+EA + ++ ++GV D + Y + ++ LF+ M + G PD+++YNIL
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I + ++ VDEA+N+ E++ + P+ ++Y L + L + G + +A M +G
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
PD+ Y+ ++E + + ++ A +F ++ +PN+ +YNIL+ KNGR EA+
Sbjct: 544 N-PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 293 SIYQNMCLRNIVRDSETFKLL 313
+Y M + + DS T+ +L
Sbjct: 603 DLYSKMKQQGLTPDSITYTVL 623
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 10/217 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQL--VKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
Y +++ LC G+G I+ ++ L + V + ++YNTV L K ++ L
Sbjct: 410 YMSMLESLC---GAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQG 114
+M + G PD+ T++ LI F + E + E D+ S+N +++ L K G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ EAH EM ++G+ PDV++Y+ LM+ + +V+ A LF+ M+ G P++ +YN
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
IL+ K R EA++L M + L P+++TY L
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 168/358 (46%), Gaps = 30/358 (8%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
K ++ YN ++ L KD KA ++ +M +R D T++ +I + E
Sbjct: 235 KLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVG 291
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L NE +L+V +N +M L K ++ +A V M++ G +P+ +Y++L++
Sbjct: 292 LFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLV 351
Query: 147 LKCKVDKARKLFDMMIEAG---LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
+ ++ + D ++E + ++SY L++ K+ V EA L DM + +
Sbjct: 352 AEGQLVR----LDGVVEISKRYMTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKI 262
+Y + + LC G+ +A L+++H +G D YN + L + + + + +
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG-VVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 263 FNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
F + P P++ +YNILI+ + + G VDEA++I++ + + D ++ LIN K
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 320 RKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVAQRVSQ--LYGACDPDV 369
D+A +K N D+ + LM+ K E+A + + L C P++
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 164/382 (42%), Gaps = 53/382 (13%)
Query: 37 IYNTVIHGLCKDGL---VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
+YN +I L + L ++ + + M++ + ++ T + LI F + + + L+
Sbjct: 135 LYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLV 194
Query: 94 NENSLDVCSFNI--IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
+ L + SF ++ A + +A V E+ + G + D+ +Y +L+D K
Sbjct: 195 KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALA---KD 251
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
+KA ++F+ M + D ++Y I+I+ +I + DEA+ L +M+T+ L N V Y L
Sbjct: 252 EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL 311
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ----------------- 254
L + + A +RM G RP + T Y+++L L +
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYT-YSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 255 ----------------HLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIY 295
H+ +A+++F + P SY ++ C G+ EA+ +
Sbjct: 371 TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML 430
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDGLRKN 349
+ + +V D+ + + +A K KQ L++ + D+ + IL+ +
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 350 G-MEEVAQRVSQLYGA-CDPDV 369
G ++E +L + C PD+
Sbjct: 491 GEVDEAINIFEELERSDCKPDI 512
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 122/237 (51%), Gaps = 8/237 (3%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
++ FN ++D L K + +A V +M K+ +PD+ SYTIL++G+ + + + ++
Sbjct: 195 MESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEV 254
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
M + G PDV +Y I+I +CK ++ +EA+ +M +N P+ + L +GL
Sbjct: 255 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 314
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE---PNVQ 273
+L DA F R G P + YN ++ C Q ++ A K + + + PN +
Sbjct: 315 EKKLNDALEFFERSKSSGF-PLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+Y+I++ + R EA +YQ M V T+++++ FC +++ D AI ++
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQTMSCEPTV---STYEIMVRMFCNKERLDMAIKIW 427
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 2/229 (0%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D+ S+ I+++ ++ LL V EM G +PDV++Y I+++ +C K ++A + F
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ M + P + LI G +++++A+ E + A TY L C
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNI 277
R+ DA+ + M +G P+ Y+IIL L Q +A +++ ++ EP V +Y I
Sbjct: 351 QRMEDAYKTVDEMRLKG-VGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEI 409
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
++ +C R+D A+ I+ M + ++ F LI A C + D+A
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEA 458
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 23/323 (7%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHAD---QWKEVRLLLN 94
+N ++ L K V AQK+ +M ++ PD+ +++ L+ G+ + EV +
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 95 ENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+ DV ++ II++A CK EA EM +R +P + L++G + K++
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
A + F+ +G + +YN L+ YC +R+++A ++M K + PNA TY +
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPE-- 269
L R R +A+ M P ++ Y I++ C ++ LD A KI++ + +
Sbjct: 380 HHLIRMQRSKEAYEVYQTMSCE----PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 270 -PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
P + ++ LI+ C ++DEA + M I F L + DK
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTD 495
Query: 329 LYKNNRDLCPFKILMDGLRKNGM 351
L + MD LRK +
Sbjct: 496 LV----------VKMDRLRKTQL 508
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 8/213 (3%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P++V Y +I+ CK +A + +EM QR P F SLI G + +
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 92 LLNENS-----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ L+ ++N ++ A C + +A+ EM +GV P+ +Y I++
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
++ ++++ +++ P V +Y I+++ +C ER+D A+ + ++M K ++P
Sbjct: 384 ---RMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
+ L LC +L +A + M G RPP
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG +++ CK+K AI+ E+E KP+ I+ ++I+GL + +N A +
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRN-CKPSPHIFCSLINGLGSEKKLNDALEFFERS 328
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
G + T+++L+ +C + + ++ ++E L + +++II+ L +
Sbjct: 329 KSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA+ V M +P V +Y I++ +C K ++D A K++D M G++P + ++ L
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSL 445
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
I C ++DEA +ML + P + L L GR + + +M
Sbjct: 446 ITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 122/223 (54%), Gaps = 5/223 (2%)
Query: 24 ELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA 83
E+ + ++P+L YN +I C+ G + + + +EM ++GI P+ +F +I GF
Sbjct: 176 EMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAE 235
Query: 84 DQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISY 138
D+ EV +L ++ V ++NI + +LCK+ EA A+ M+ G++P+ ++Y
Sbjct: 236 DKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 139 TILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT 198
+ L+ G+C + ++A+KLF +M+ G PD Y LI CK + A++LC++ +
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESME 355
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
KN VP+ K L +GL + ++ +A + ++ + R +L
Sbjct: 356 KNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVEL 398
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 135/273 (49%), Gaps = 14/273 (5%)
Query: 32 KPNLVIYNTVIHGL---CKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
+P+L H + + +++ + ++ ++ + I V + ++L++ A +KE
Sbjct: 110 RPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKE 169
Query: 89 VRLLLNEN------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ + E D+ ++N ++ C+ G ++++ EM ++G++P+ S+ +++
Sbjct: 170 AKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMI 229
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
G+ + K D+ K+ MM + G+ V +YNI IQ CK ++ EA L + ML+ +
Sbjct: 230 SGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMK 289
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANK 261
PN VTY +L G C +A M RG + PD Y ++ LC+ + A
Sbjct: 290 PNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCK-PDSECYFTLIYYLCKGGDFETALS 348
Query: 262 IFNSLIPEPNVQSYNI---LISGYCKNGRVDEA 291
+ + + V S++I L++G K+ +V+EA
Sbjct: 349 LCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 381
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 144/311 (46%), Gaps = 19/311 (6%)
Query: 69 DVVTFSSLIYGFCHADQWKEVRLLLN---ENSLDVCSFNIIMDAL---CKQGLLLEAHAV 122
D + FS+ + + V LL+ EN D+ S A+ + +L + V
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRV 138
Query: 123 CYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF-DMMIEAGLVPDVWSYNILIQGYC 181
++ K + V S L+ + +A++++ +M G+ PD+ +YN +I+ +C
Sbjct: 139 FRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFC 198
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ + ++ +M K + PN+ ++ + G + + L M RG +
Sbjct: 199 ESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNI-GV 257
Query: 242 TPYNIILETLCEQHLDK-ANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQN 297
+ YNI +++LC++ K A + + ++ +PN +Y+ LI G+C +EA +++
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 298 MCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN--RDLCP----FKILMDGLRKNG- 350
M R DSE + LI CK + A++L K + ++ P K L++GL K+
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSK 377
Query: 351 MEEVAQRVSQL 361
+EE + + Q+
Sbjct: 378 VEEAKELIGQV 388
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G ++SG S + L ++ + V + YN I LCK +A+ L M
Sbjct: 225 FGLMISGFYAEDKSDEVGKVLAMMKD-RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNE--NSLDVCSFNIIMDALCKQGL 115
+ G+ P+ VT+S LI+GFC+ D ++E + +++N C F +I LCK G
Sbjct: 284 LSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIY-YLCKGGD 342
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
A ++C E +++ P L++G KV++A++L G V + ++ N+
Sbjct: 343 FETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI------GQVKEKFTRNV 396
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 144/290 (49%), Gaps = 15/290 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ L ++K G + L E+ KPN V YN +IH + + +A + ++M
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEM-VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 62 IQRGIFPDVVTFSSLI-----YGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLL 116
+ G PD VT+ +LI GF R+ S D ++++I++ L K G L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
AH + EM+ +G P+++++ I++ + + A KL+ M AG PD +Y+I+
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 177 IQ--GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
++ G+C ++EA + +M KN VP+ Y L D + G + AW + M
Sbjct: 541 MEVLGHCGF--LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA 598
Query: 235 GHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIP---EPNVQSYNILIS 280
G R P++ N +L T H + +A + S++ P++Q+Y +L+S
Sbjct: 599 GLR-PNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 27/262 (10%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D ++ ++ L + E + + EM++ G +P+ ++Y L+ Y + +A +F
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ M EAG PD +Y LI + K +D AM++ + M L P+ TY + + L +
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIIL---------ETLCEQHLDKANKIFNSLIPE 269
G LP A M +G P +L +NI++ ET + + D N F +
Sbjct: 478 GHLPAAHRLFCEMVGQGCTP-NLVTFNIMIALHAKARNYETALKLYRDMQNAGF-----Q 531
Query: 270 PNVQSYNILIS--GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
P+ +Y+I++ G+C G ++EA ++ M +N V D + LL++ + K DKA
Sbjct: 532 PDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 328 ALYKNNRDLCPFKILMDGLRKN 349
Y+ +L GLR N
Sbjct: 590 QWYQ--------AMLQAGLRPN 603
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 9/205 (4%)
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
+ G D +Y ++ + ++ E L ++M+ PN VTY L R L
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNILI 279
+A N +M G P +T +I LD A ++ + P+ +Y+++I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 280 SGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR----- 334
+ K G + A ++ M + + TF ++I K + + A+ LY++ +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 335 -DLCPFKILMDGLRKNGMEEVAQRV 358
D + I+M+ L G E A+ V
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGV 556
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 157/348 (45%), Gaps = 53/348 (15%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
M+ L+ K+ +++ Q+++ L V+ + YN++ + + G A++ ++
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLG-VERTIKSYNSLFKVILRRGRYMMAKRYFNK 245
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
M+ G+ P T++ +++GF + L LE
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLS-------------------------------LRLETA 274
Query: 121 AVCYEMIK-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+E +K RG+ PD ++ +++G+C K+D+A KLF M + P V SY +I+G
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
Y ++RVD+ + + E+M + + PNA TY L GLC G++ +A N L M + P
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394
Query: 240 DLTPYNIILETLCEQH----LDKANKIFNSL----IPEPNVQSYNILISGYCKNGRVDEA 291
D +I L+ L Q + A ++ ++ +P Y +LI CK + A
Sbjct: 395 D---NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVP-AEAGHYGVLIENQCKASAYNRA 450
Query: 292 MSIYQNMCLRNIV-RDSETFKL-------LINAFCKRKQCDKAIALYK 331
+ + + + I+ R +T ++ +I C Q KA L++
Sbjct: 451 IKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFR 498
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 156/381 (40%), Gaps = 84/381 (22%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V+P YN ++ G + A + +M RGI PD TF+++I GFC +
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK----- 305
Query: 91 LLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
MD EA + EM + P V+SYT ++ GY +
Sbjct: 306 ----------------MD---------EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP--NAVTY 208
VD ++F+ M +G+ P+ +Y+ L+ G C ++ EA N+ ++M+ K++ P N++
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 209 KYLFDGLCRFGRLPDAWNFLTRM----------HY------------------------- 233
K L + G + A L M HY
Sbjct: 401 KLLV-SQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIE 459
Query: 234 -----RGHRPPDLTP--YNIILETLCEQ-HLDKANKIFNSLIPE--PNVQSYNILISGYC 283
R ++ P YN I+E LC KA +F L+ + + N LI G+
Sbjct: 460 KEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHA 519
Query: 284 KNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF-CKRKQCDKAIALYK-----NNRDLC 337
K G D + I + M R + R+S ++LLI ++ K + D AL + D
Sbjct: 520 KEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSS 579
Query: 338 PFKILMDGLRKNGMEEVAQRV 358
F+ +++ L ++G + A RV
Sbjct: 580 LFRSVIESLFEDGRVQTASRV 600
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 7/219 (3%)
Query: 120 HAVC--YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
HA C +M ++GV D + +L++ Y V ++ K+F M + G+ + SYN L
Sbjct: 168 HARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLF 227
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+ + R A M+++ + P TY + G RL A F M RG
Sbjct: 228 KVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGIS 287
Query: 238 PPDLTPYNIILETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMS 293
P D T +N ++ C + +D+A K+F + P+V SY +I GY RVD+ +
Sbjct: 288 PDDAT-FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLR 346
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
I++ M I ++ T+ L+ C + +A + KN
Sbjct: 347 IFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKN 385
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 44/246 (17%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLV---------KPNLVIYNTVIHGLCKDGLVN 52
YG L+ CK+ AI+ L L +++ +P+ YN +I LC +G
Sbjct: 434 YGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTA 491
Query: 53 KAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCK 112
KA+ L ++++RG+ D ++LI G HA K
Sbjct: 492 KAEVLFRQLMKRGV-QDQDALNNLIRG--HA----------------------------K 520
Query: 113 QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWS 172
+G ++ + M +RGV + +Y +L+ Y K + A+ D M+E G VPD
Sbjct: 521 EGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSL 580
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKN--LVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
+ +I+ + RV A + M+ KN + N + + L G + +A +
Sbjct: 581 FRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDL 640
Query: 231 MHYRGH 236
++ GH
Sbjct: 641 LNQNGH 646
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 8/297 (2%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV- 89
+ PN + +I LCK+G + + L + + P V+ +SL++ + +E
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 90 ----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
RLL+ +D ++I++ A K+G L+ A V EM++RG + YT+ +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
C K V +A +L M E+G+ P ++N LI G+ + ++ + CE M+T+ L+P+
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
+ + + + + A LT+ +G P + T ++I + +D+A K+F
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 266 L---IPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ P + + LI G C G+V+ + M R I +++ + LI AF K
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL-- 91
N +Y + C+ G V +A++L SEM + G+ P TF+ LI GF W+E L
Sbjct: 338 NSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFG-WEEKGLEY 396
Query: 92 ---LLNENSLDVCS-FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
++ + CS FN ++ ++ K + A+ + + I +G PD +Y+ L+ G+
Sbjct: 397 CEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIE 456
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+D+A KLF M + P + LI G C +V+ + M + + PNA
Sbjct: 457 GNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADI 516
Query: 208 YKYLFDGLCRFGRLPDA 224
Y L + G +A
Sbjct: 517 YDALIKAFQKIGDKTNA 533
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
I + + P+ I+ I++ C + ++ + L D + +P V L+ + R+
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+E+M+L + +L KN+V + + Y + + G L A M RG Y +
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFV-YTV 344
Query: 247 ILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+ CE+ + +A ++ + + P +++N LI G+ + G ++ + + M R
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRG 404
Query: 303 IVRDSETFKLLINAFCKRKQCDKA 326
++ F ++ + K + ++A
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRA 428
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
+F + + G V + N LI K + D + E + K + PN +T + + LC
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLC 245
Query: 217 RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQ--- 273
+ GRL + + L R+ + P + +++ L E ++++ + L+ + V
Sbjct: 246 KEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTI 305
Query: 274 SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN 333
Y+I++ K G + A ++ M R +S + + + C++ +A L
Sbjct: 306 GYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEM 365
Query: 334 RD--LCP----FKILMDGLRKNGMEE 353
+ + P F L+ G + G EE
Sbjct: 366 EESGVSPYDETFNCLIGGFARFGWEE 391
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 124 YEMIKR----GVQPDVISYTILMDGYCLKCKVDK-ARKLFDMMIEAGLVPDVWSYNILIQ 178
+++ KR G VI+ L+ Y K K+D ++++ I+ + P+ + I+IQ
Sbjct: 184 FDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQ 242
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
CK R+ E ++L + + K +P+ + L + R+ ++ + L R+ + +
Sbjct: 243 VLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK-NMV 301
Query: 239 PDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSI 294
D Y+I++ E L A K+F+ ++ N Y + + C+ G V EA +
Sbjct: 302 VDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERL 361
Query: 295 YQNMCLRNIVRDSETFKLLINAFCK 319
M + ETF LI F +
Sbjct: 362 LSEMEESGVSPYDETFNCLIGGFAR 386
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P+++ YN V+ + G ++ +L EM++ G PD+ T++ L++ ++ L
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNL 314
Query: 93 LN---ENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
LN E ++ V F ++D L + G L E +K G PDV+ YT+++ GY
Sbjct: 315 LNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYIS 374
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+++KA ++F M E G +P+V++YN +I+G+C + EA L ++M ++ PN V
Sbjct: 375 GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVV 434
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
Y L + L G++ +A + M +GH
Sbjct: 435 YSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 11/239 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P YN ++H L + +M++ G PDV+T++ +++ + +
Sbjct: 219 RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
LL+E S D+ ++NI++ L L A + M + GV+P VI +T L+DG
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
K++ + D ++ G PDV Y ++I GY +++A + ++M K +PN
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
TY + G C G+ +A L M RG P N ++ + +L A K+ +
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRGCNP------NFVVYSTLVNNLKNAGKVLEA 451
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 47/308 (15%)
Query: 56 KLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-RLLLNENSLDV----CSFNIIMDAL 110
+L EMI+ G TF+ LI A ++V + + + S+N I+ +L
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 111 --CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
KQ L++ V +M++ G PDV++Y I+M K D+ +L D M++ G P
Sbjct: 233 LGVKQYKLIDW--VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
D+++YNIL+ + A+NL M + P + + L DGL R G+L
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE------ 344
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRV 288
C+ +D+ K+ + P+V Y ++I+GY G +
Sbjct: 345 ----------------------ACKYFMDETVKVGCT----PDVVCYTVMITGYISGGEL 378
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKIL 342
++A +++ M + + + T+ +I FC + +A AL K N + + L
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 343 MDGLRKNG 350
++ L+ G
Sbjct: 439 VNNLKNAG 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 6/141 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL+ GL ++ G A + + P++V Y +I G G + KA+++ EM
Sbjct: 330 FTTLIDGLSRA-GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM 388
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCS-----FNIIMDALCKQGLL 116
++G P+V T++S+I GFC A ++KE LL E C+ ++ +++ L G +
Sbjct: 389 TEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Query: 117 LEAHAVCYEMIKRGVQPDVIS 137
LEAH V +M+++G +IS
Sbjct: 449 LEAHEVVKDMVEKGHYVHLIS 469
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V+P ++ + T+I GL + G + + E ++ G PDVV ++ +I G+ + ++
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ E + +V ++N ++ C G EA A+ EM RG P+ + Y+ L++
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 146 CLKCKVDKARKLFDMMIEAG 165
KV +A ++ M+E G
Sbjct: 443 KNAGKVLEAHEVVKDMVEKG 462
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 178/402 (44%), Gaps = 83/402 (20%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL++ + K G+ + E+E K + + +N VI+ + G + A + +M
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQ-SGTKLDSIFFNAVINAFSESGNMEDAVQALLKM 141
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLNENSLDVC----SFNIIMDALCKQ 113
+ G+ P T+++LI G+ A + + + L+L E ++DV +FN+++ A CK+
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYT---------------------------------- 139
+ EA V +M + GV+PD ++Y
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 140 ---ILMDGYCLKCKVDKA----RKLFDMMIEAGLVPDVWSYNILIQGYCKI---ERVDEA 189
I++ GYC + +V R++ +M +EA LV +N LI G+ ++ + +DE
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV----VFNSLINGFVEVMDRDGIDEV 317
Query: 190 ------MNLCED----------------MLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNF 227
M+ E+ M N+ + +TY + + G + A
Sbjct: 318 TLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 228 LTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE--PNVQSYNILISGYCK 284
M G +P D Y+I+ + + KA ++ +LI E PNV + +ISG+C
Sbjct: 378 FKEMVKAGVKP-DAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCS 436
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
NG +D+AM ++ MC + + +TF+ L+ + + KQ KA
Sbjct: 437 NGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 478
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 169/393 (43%), Gaps = 80/393 (20%)
Query: 45 LCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLD 99
L + G ++AQ + + + G P ++++++L+ Q+ + +++E LD
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
FN +++A + G + +A +M + G+ P +Y L+ GY + K +++ +L D
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 160 MMIEAGLV---PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL----- 211
+M+E G V P++ ++N+L+Q +CK ++V+EA + + M + P+ VTY +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 212 --------------------------------FDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
G CR GR+ D F+ RM
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM-RVEA 293
Query: 240 DLTPYNIILETLCE-QHLDKANKI--------FN----------------SLIPEPNVQ- 273
+L +N ++ E D +++ FN +L+ E NV+
Sbjct: 294 NLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKA 353
Query: 274 ---SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL- 329
+Y+ +++ + G +++A +++ M + D+ + +L + + K+ KA L
Sbjct: 354 DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 413
Query: 330 ----YKNNRDLCPFKILMDGLRKNGMEEVAQRV 358
++ ++ F ++ G NG + A RV
Sbjct: 414 ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRV 446
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L G ++K A + L+ L + +PN+VI+ TVI G C +G ++ A ++ ++M
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETL--IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKM 450
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQ-WKEVRLL 92
+ G+ P++ TF +L++G+ Q WK +L
Sbjct: 451 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 482
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 7/222 (3%)
Query: 5 LMSGLCKSKGSG-NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
L+S C++ S + + + L ++P+ V + + LC+ G V++A+ L E+ +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVCSFNIIMDALCKQGLLL 117
+ PD T++ L+ C V ++E D+ SF I++D +C L
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + ++ G +PD Y +M G+C K +A ++ M E G+ PD +YN LI
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
G K RV+EA + M+ P+ TY L +G+CR G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 17/235 (7%)
Query: 32 KPNLVIYNTVIHGLCK--DGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
+P + ++ C+ D ++ ++ + M+ G+ PD VT + C + E
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 90 RLLLNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKR-----GVQPDVISYT 139
+ L+ E + D ++N ++ LCK L V YE + V+PD++S+T
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL----HVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
IL+D C + +A L + AG PD + YN +++G+C + + EA+ + + M +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ 254
+ P+ +TY L GL + GR+ +A +L M G+ PD Y ++ +C +
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE-PDTATYTSLMNGMCRK 348
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 36/317 (11%)
Query: 11 KSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI--QRGIFP 68
KS +A + A + +L +N+V+ +VN KL ++ Q P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 69 DVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIK 128
TF L+ C A + H V M+
Sbjct: 121 GRSTFLILLSHACRAPDSS----------------------------ISNVHRVLNLMVN 152
Query: 129 RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDE 188
G++PD ++ I + C +VD+A+ L + E PD ++YN L++ CK + +
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 189 AMNLCEDMLTK-NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
++M ++ P+ V++ L D +C L +A ++++ G +P D YN I
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP-DCFLYNTI 271
Query: 248 LETLCE-QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
++ C +A ++ + E P+ +YN LI G K GRV+EA + M
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 304 VRDSETFKLLINAFCKR 320
D+ T+ L+N C++
Sbjct: 332 EPDTATYTSLMNGMCRK 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ LCK K + + E+ VKP+LV + +I +C + +A L S++
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE---VRLLLNENSL--DVCSFNIIMDALCKQGLL 116
G PD +++++ GFC + E V + E + D ++N ++ L K G +
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
EA M+ G +PD +YT LM+G C K
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 30/260 (11%)
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEA--GLVPDVWSYNILIQGYCK-----IERV 186
D+ + ++ Y V+ KLF ++++ P ++ IL+ C+ I V
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNV 143
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+NL M+ L P+ VT LC GR+ +A + + + + H PPD YN
Sbjct: 144 HRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK-HSPPDTYTYNF 199
Query: 247 ILETLCE--------QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+L+ LC+ + +D+ F+ +P++ S+ ILI C + + EAM + +
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDV---KPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDGLRKNGME 352
D + ++ FC + +A+ +YK + D + L+ GL K G
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 353 EVAQRV--SQLYGACDPDVA 370
E A+ + + +PD A
Sbjct: 317 EEARMYLKTMVDAGYEPDTA 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 1 MYGTLMSGLCK-SKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+Y T+M G C SKGS A+ ++++ + V+P+ + YNT+I GL K G V +A+
Sbjct: 267 LYNTIMKGFCTLSKGS-EAVGVYKKMKE-EGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 60 EMIQRGIFPDVVTFSSLIYGFC 81
M+ G PD T++SL+ G C
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMC 346
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 45/291 (15%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL 98
+TV+ ++GL+ +A++ +E+ G P VT+++L+ F A + E +L E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 99 DVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
+ C ++N ++ A + G EA V M K+GV P+ I+YT ++D Y K D+
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A KLF M EAG VP+ +YN ++ K R +E + + DM + PN T
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT------ 458
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIP---E 269
+N +L + +DK N++F + E
Sbjct: 459 ------------------------------WNTMLALCGNKGMDKFVNRVFREMKSCGFE 488
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
P+ ++N LIS Y + G +A +Y M T+ L+NA ++
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 102/200 (51%), Gaps = 30/200 (15%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
KP++VI+N+++ ++ + ++A+ + + + G+ PD+VT++SL
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL--------------- 672
Query: 92 LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
MD ++G +A + + K ++PD++SY ++ G+C + +
Sbjct: 673 ---------------MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
+A ++ M E G+ P +++YN + GY + E ++ E M + PN +T+K +
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMV 777
Query: 212 FDGLCRFGRLPDAWNFLTRM 231
DG CR G+ +A +F++++
Sbjct: 778 VDGYCRAGKYSEAMDFVSKI 797
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 165/372 (44%), Gaps = 33/372 (8%)
Query: 30 LVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
L K +V+ N+++ GL + SE+++ D+V SL+ G + W+
Sbjct: 104 LCKKEVVLVNSIVEQPLT-GLSRFFDSVKSELLR----TDLV---SLVKGLDDSGHWERA 155
Query: 90 -----RLLLNENS----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
L+L+ NS LD I + L ++ A + ++ + DV +YT
Sbjct: 156 VFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTT 215
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV-DEAMNLCEDMLTK 199
++ Y K +KA LF+ M E G P + +YN+++ + K+ R + + + ++M +K
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-----Q 254
L + T + R G L +A F + G+ P +T YN +L+ + +
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT-YNALLQVFGKAGVYTE 334
Query: 255 HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
L ++ + P +V +YN L++ Y + G EA + + M + ++ ++ T+ +I
Sbjct: 335 ALSVLKEMEENSCPADSV-TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 315 NAFCKRKQCDKAIALYKNNRD------LCPFKILMD--GLRKNGMEEVAQRVSQLYGACD 366
+A+ K + D+A+ L+ + ++ C + ++ G + E + C
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 367 PDVALVRNQLAL 378
P+ A LAL
Sbjct: 454 PNRATWNTMLAL 465
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 123/296 (41%), Gaps = 38/296 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L++ L + + + ++++ + KP Y+ ++ K G +++ + +
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKS-KGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 62 IQRGIFPDVVTFSSLIYG--FCHADQWKEVRLLLNEN---SLDVCSFNIIMDALCKQGLL 116
+ IFP + +L+ C A E L + D+ FN ++ + +
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A + + + G+ PD+++Y LMD Y + + KA ++ + ++ L PD+ SYN +
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G+C+ + EA+ + +M + + P TY G G + + + M
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAM 292
RP +LT + +++ GYC+ G+ EAM
Sbjct: 768 RPNELT--------------------------------FKMVVDGYCRAGKYSEAM 791
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 137/342 (40%), Gaps = 73/342 (21%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++S L K S I+ L ++++ PN +NT++ G+ ++ EM
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKS-NGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 62 IQRGIFPDVVTFSSLI--YGFCHAD-QWKEVRLLLNENSLDVC--SFNIIMDALCKQGLL 116
G PD TF++LI YG C ++ ++ + + C ++N +++AL ++G
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYC------------------------------ 146
V +M +G +P SY++++ Y
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL 602
Query: 147 ----LKCK-VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
KC+ + + + F + + G PD+ +N ++ + + D+A + E + L
Sbjct: 603 LLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
P+ VTY L D R G + W IL+TL + L
Sbjct: 663 SPDLVTYNSLMDMYVRRG---ECWK-----------------AEEILKTLEKSQL----- 697
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
+P++ SYN +I G+C+ G + EA+ + M R I
Sbjct: 698 -------KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 5/209 (2%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P+++ YN ++ + G +++ +L EM + G PD T++ L++ ++
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 93 LN---ENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
LN E +D V + ++D L + G L EM+K G +PDV+ YT+++ GY +
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++DKA+++F M G +P+V++YN +I+G C EA L ++M ++ PN V
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
Y L L + G+L +A + M +GH
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 11/236 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P YN +++ L + + +M++ G PDV+T++ L++ +
Sbjct: 216 RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L +E S D ++NI++ L K L A M + G+ P V+ YT L+DG
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
++ + D M++AG PDV Y ++I GY +D+A + +M K +PN
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
TY + GLC G +A L M RG P N ++ + +L KA K+
Sbjct: 396 TYNSMIRGLCMAGEFREACWLLKEMESRGCNP------NFVVYSTLVSYLRKAGKL 445
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 131/282 (46%), Gaps = 14/282 (4%)
Query: 56 KLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE-VRLLLNENSLDV----CSFNIIMDAL 110
+L EM+Q G TF+ LI A K+ V + + + S+N I+++L
Sbjct: 170 RLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSL 229
Query: 111 --CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
KQ L+E V +M++ G PDV++Y IL+ K+D+ +LFD M G P
Sbjct: 230 LGVKQYKLIEW--VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSP 287
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
D ++YNIL+ K + A+ M + P+ + Y L DGL R G L FL
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFL 347
Query: 229 TRMHYRGHRPPDLTPYNIILET-LCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCK 284
M G R PD+ Y +++ + LDKA ++F + + PNV +YN +I G C
Sbjct: 348 DEMVKAGCR-PDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 406
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
G EA + + M R + + L++ K + +A
Sbjct: 407 AGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEA 448
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ L K A+ TL ++ + + P+++ Y T+I GL + G + + EM
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKEVG-IDPSVLHYTTLIDGLSRAGNLEACKYFLDEM 350
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
++ G PDVV ++ +I G+ + + + + + E ++ +V ++N ++ LC G
Sbjct: 351 VKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 410
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG----LVPDVWS 172
EA + EM RG P+ + Y+ L+ K+ +ARK+ M++ G LVP +
Sbjct: 411 REACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMK 470
Query: 173 Y 173
Y
Sbjct: 471 Y 471
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 123/235 (52%), Gaps = 5/235 (2%)
Query: 12 SKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVV 71
+K A + E+ + ++P+L YN +I LC+ G + + + +EM ++ I P
Sbjct: 159 AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAA 218
Query: 72 TFSSLIYGFCHADQWKEVRLLLNENS-----LDVCSFNIIMDALCKQGLLLEAHAVCYEM 126
+F +I GF +++ EVR ++ + V ++NI++ LCK+ EA A+ +
Sbjct: 219 SFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGV 278
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
+ ++P+ ++Y++L+ G+C + +D+A LF++M+ G PD Y LI CK
Sbjct: 279 MSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDF 338
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ A+ LC + + KN VP+ K+L +GL ++ +A + + + R DL
Sbjct: 339 ETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDL 393
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 144/290 (49%), Gaps = 30/290 (10%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-RLL 92
+ + +++G + +++++ + + Q I V + ++L++ A +KE R+
Sbjct: 112 SFAVRAIILYG--RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVY 169
Query: 93 LNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
L + D+ ++N ++ LC+ G ++++ EM ++ ++P S+ +++DG+
Sbjct: 170 LEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ K D+ RK+ MM E G+ V +YNI+IQ CK ++ EA L + +++ + PN+VT
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII--------LET---LCEQHL 256
Y L G C L +A N M G++P + +I ET LC + +
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 257 DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEA---MSIYQNMCLRNI 303
+K + +P +V + L++G +VDEA +++ + RN+
Sbjct: 350 EK------NWVPSFSVMKW--LVNGLASRSKVDEAKELIAVVKEKFTRNV 391
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 165 GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
G+ PD+ +YN +I+ C+ + ++ +M K + P A ++ + DG + + +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 225 WNFLTRMHYRGHRPPDLTPYNIILETLCEQHLD-KANKIFNSLIP---EPNVQSYNILIS 280
+ M G + YNI+++ LC++ +A + + ++ PN +Y++LI
Sbjct: 237 RKVMRMMDEFGVHV-GVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
G+C +DEAM++++ M DSE + LI+ CK + A+ L
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALIL 344
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 38/289 (13%)
Query: 20 QTLQELEALQLVKPNL---VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL 76
QT++ + + P+ +N ++ LC++ + A+ + + + PD+ TF+ L
Sbjct: 162 QTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNIL 220
Query: 77 IYGFCHADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPD 134
+ G+ +++ + + L DV ++N ++D CK + +A+ + +M + PD
Sbjct: 221 LSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD 280
Query: 135 VISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCE 194
VI+YT ++ G L + DKAR++ M E G PDV +YN I+ +C R+ +A L +
Sbjct: 281 VITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD 340
Query: 195 DMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ 254
+M+ K L PNA TY F L L +W RM L C
Sbjct: 341 EMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRM----------------LGNECL- 383
Query: 255 HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
PN QS LI + ++ +VD AM ++++M ++
Sbjct: 384 ---------------PNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 13/250 (5%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
+KP++V YN++I CKD + KA KL +M + PDV+T++++I G Q + R
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 91 LLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+L E DV ++N + C L +A + EM+K+G+ P+ +Y +
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
L + ++ +L+ M+ +P+ S LI+ + + E+VD AM L EDM+ K +
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYS 421
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI-ILETLCEQHLDKANK--- 261
+ L D LC ++ +A L M +GHRP +++ I +L L +H D+ N
Sbjct: 422 LVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKH-DEVNNLIQ 480
Query: 262 ---IFNSLIP 268
IF++ IP
Sbjct: 481 KMAIFSTEIP 490
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 11/251 (4%)
Query: 86 WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
WK RL+ + D FN ++ LC++ + +A V Y +K QPD+ ++ IL+ G+
Sbjct: 168 WKFKRLV--PDFFDTACFNALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNILLSGW 224
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+ + + M GL PDV +YN LI YCK +++A L + M + P+
Sbjct: 225 KSSEEAEAFFE---EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDV 281
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFN 264
+TY + GL G+ A L M G P D+ YN + C + L A+K+ +
Sbjct: 282 ITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYP-DVAAYNAAIRNFCIARRLGDADKLVD 340
Query: 265 SLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
++ + PN +YN+ + + +Y M + ++++ LI F + +
Sbjct: 341 EMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHE 400
Query: 322 QCDKAIALYKN 332
+ D A+ L+++
Sbjct: 401 KVDMAMRLWED 411
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 240 DLTPYNIILETLC-EQHLDKANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMSIYQ 296
D +N +L TLC E+ + A +++SL + P++Q++NIL+SG+ + + +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK 238
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR------DLCPFKILMDGLRKNG 350
L+ D T+ LI+ +CK ++ +KA L R D+ + ++ GL G
Sbjct: 239 GKGLKP---DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 351 MEEVAQRV---SQLYGACDPDVA 370
+ A+ V + YG C PDVA
Sbjct: 296 QPDKAREVLKEMKEYG-CYPDVA 317
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 171/404 (42%), Gaps = 63/404 (15%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
+ + LC + A+ ++++ L P YN+VI L ++ ++ L + +
Sbjct: 481 AVVTTALCSQRNYIAALSRIEKMVNLGCT-PLPFSYNSVIKCLFQENIIEDLASLVNIIQ 539
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSL--DVCSFNIIMDALCKQGLLL 117
+ PDV T+ ++ C + +++ E L V ++ I+ +L KQG ++
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA +M++ G+QPD I+Y I+++ Y ++D+A +L + +++ L P ++Y +LI
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR----------------- 220
G+ K+ +++ + ML L PN V Y L + G
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 221 ---------LPDAWNFLTRMHYRG-----------HRPPDLTPYNIILETLCEQ-----H 255
L W + R R R P I +L
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 256 LDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
++ K+ S+I PN+ +N +I+GYC GR+DEA + ++M IV + T+ +L+
Sbjct: 780 MEVIGKVKKSII--PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 316 AFCKRKQCDKAIALYKNN-------------RDLCPFKILMDGL 346
+ + + AI L++ + LC FK +D L
Sbjct: 838 SHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDAL 881
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 164/374 (43%), Gaps = 45/374 (12%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++ LCK A + +E L L +P + IY+++I L K G V +A++ ++M
Sbjct: 550 YLIVVNELCKKNDRDAAFAIIDAMEELGL-RPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE---NSLDVCSFN--IIMDALCKQGLL 116
++ GI PD + + +I + + E L+ E + L SF +++ K G++
Sbjct: 609 LESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMM 668
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ +M++ G+ P+V+ YT L+ + K + LF +M E + D +Y L
Sbjct: 669 EKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITL 728
Query: 177 IQGYCK-------------------IERVDEAMNLCE------------------DMLTK 199
+ G + ++R+ L + K
Sbjct: 729 LSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK 788
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDK 258
+++PN + + G C GRL +A+N L M G P+L Y I++++ E ++
Sbjct: 789 SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG-IVPNLVTYTILMKSHIEAGDIES 847
Query: 259 ANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
A +F EP+ Y+ L+ G C R +A+++ M I + ++++ L+ C
Sbjct: 848 AIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 319 KRKQCDKAIALYKN 332
+ +A+ + K+
Sbjct: 908 YSRLTMEAVKVVKD 921
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 158/364 (43%), Gaps = 40/364 (10%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L GLC AI L L + + + +Y ++ + CK G +A+ L M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 65 GIFPDVVTFSSLIYGFCHADQWK-----EVRLLLNENSLDVCSFNIIMDALCKQGLLLEA 119
G + D V ++ L+ +C + +R++ LD C FN ++ K G+L +
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF-DMMIEAGLVPDVWSYNILIQ 178
+ +MIK+GVQ +V +Y I++ YC + VD A +LF + + +V Y LI
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM--HYRGH 236
G+ K +D+A++L ML +VP+ +TY L L + L A L + + G
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 237 RPP---DLTPYNIILET-----------------------LCEQH-----LDKANKIFNS 265
PP DL + +E+ LC Q L + K+ N
Sbjct: 447 NPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVN- 505
Query: 266 LIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
L P SYN +I + +++ S+ + + V D +T+ +++N CK+ D
Sbjct: 506 LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDA 565
Query: 326 AIAL 329
A A+
Sbjct: 566 AFAI 569
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 156/355 (43%), Gaps = 20/355 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ CK A++ + + N+ Y +I G K G ++KA L M
Sbjct: 345 YHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM 404
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNI-IMDALCKQGLLLEAH 120
+ GI PD +T+ L+ + K ++L + C N ++D L + ++
Sbjct: 405 LDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL--GNIEVKVE 462
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
++ E+ ++ + ++ C + A + M+ G P +SYN +I+
Sbjct: 463 SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
+ +++ +L + + VP+ TY + + LC+ A+ + M G RP
Sbjct: 523 FQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPT- 581
Query: 241 LTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
+ Y+ I+ +L +Q + +A + F ++ +P+ +Y I+I+ Y +NGR+DEA + +
Sbjct: 582 VAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVE 641
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF--KILMDGLRKN 349
+ + S T+ +LI+ F K +K C + K+L DGL N
Sbjct: 642 EVVKHFLRPSSFTYTVLISGFVKMGMMEKG----------CQYLDKMLEDGLSPN 686
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 50/316 (15%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK- 87
++P+ Y +I G K G++ K + +M++ G+ P+VV +++LI F +K
Sbjct: 646 HFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKF 705
Query: 88 --EVRLLLNENSL--DVCSFNIIMDALC-------KQGLLLE------------------ 118
+ L+ EN + D ++ ++ L K+ +++E
Sbjct: 706 SFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVS 765
Query: 119 ---------AHAVCYEMI---KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL 166
+ + E+I K+ + P++ + ++ GYC ++D+A + M + G+
Sbjct: 766 IPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGI 825
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
VP++ +Y IL++ + + ++ A++L E N P+ V Y L GLC F R DA
Sbjct: 826 VPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALA 882
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCEQHLD----KANKIFNSLIPEPNVQSYNILISGY 282
+ M G P+ Y +L+ LC L K K +L P ++ LI
Sbjct: 883 LMLEMQKSGIN-PNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYIL 941
Query: 283 CKNGRVDEAMSIYQNM 298
C+ ++ EA +++ M
Sbjct: 942 CEEKKLREARALFAIM 957
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 132/307 (42%), Gaps = 19/307 (6%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSE-MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE- 95
Y +I L + G A+ ++ +I GI PD S+++ ++ E R L+
Sbjct: 98 YGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRI 157
Query: 96 ----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIK-RGVQPDVISYTILMDGYCLKCK 150
+ S ++++D LC Q LEA C+E +K RG + L G C
Sbjct: 158 IASGYAPSRNSSSLVVDELCNQDRFLEAFH-CFEQVKERGSGLWLWCCKRLFKGLCGHGH 216
Query: 151 VDKARKLFDMMIEAGLVP-DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+++A + D + +P V Y L +CK EA L + M + V Y
Sbjct: 217 LNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYT 276
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP--YNIILETLCE-QHLDKANKIFNSL 266
L C+ + A RM R +L P +N ++ + LDK +F+ +
Sbjct: 277 CLMKEYCKDNNMTMAMRLYLRMVERSF---ELDPCIFNTLIHGFMKLGMLDKGRVMFSQM 333
Query: 267 IP---EPNVQSYNILISGYCKNGRVDEAMSIY-QNMCLRNIVRDSETFKLLINAFCKRKQ 322
I + NV +Y+I+I YCK G VD A+ ++ N +I R+ + LI F K+
Sbjct: 334 IKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 323 CDKAIAL 329
DKA+ L
Sbjct: 394 MDKAVDL 400
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA A +I G P S ++++D C + + +A F+ + E G +W L
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLF 208
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVT-YKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+G C ++EA+ + + + +P V YK LF C+ G +A M G+
Sbjct: 209 KGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGY 268
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
D Y +++ C + ++ A +++ ++ E + +N LI G+ K G +D+
Sbjct: 269 YV-DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN 333
++ M + + + T+ ++I ++CK D A+ L+ NN
Sbjct: 328 VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNN 368
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 15/247 (6%)
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDM-MIEAGLVPDVWSYNIL 176
EA V + G++ D Y L+ + A ++ +I G+VPD + +
Sbjct: 78 EAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSM 137
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ K+ R DEA + ++ P+ + + D LC R +A++ ++ RG
Sbjct: 138 VFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGS 197
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSL-----IPEPNVQSYNILISGYCKNGRVDE 290
L + + LC HL++A + ++L +P P V Y L +CK G E
Sbjct: 198 GLW-LWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLP-VNLYKSLFYCFCKRGCAAE 255
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY------KNNRDLCPFKILMD 344
A +++ +M + D + L+ +CK A+ LY D C F L+
Sbjct: 256 AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIH 315
Query: 345 GLRKNGM 351
G K GM
Sbjct: 316 GFMKLGM 322
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 37/170 (21%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGF------------ 80
PNL ++NT+I G C G +++A M + GI P++VT++ L+
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL 851
Query: 81 -----CHADQWKEVRLLLN----ENSLDVC----------------SFNIIMDALCKQGL 115
C DQ LL + LD S+ ++ LC L
Sbjct: 852 FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRL 911
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
+EA V +M + P I++T L+ C + K+ +AR LF +M+++G
Sbjct: 912 TMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 18/248 (7%)
Query: 48 DGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN------SLDVC 101
D V++A+K+ + I P+ TF+S++ F + + V + E S +V
Sbjct: 228 DVSVDEAKKMIGK-----IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
S+N++M+A C +GL+ EA V EM RGV D+++Y ++ G C +V KA++LF M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC--RFG 219
G+ +Y L+ GYCK VD + + +M K + +T + L +GLC R G
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 220 -RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQS 274
R+ +A + + P Y ++++ LCE +D+A I ++ +P+ ++
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 275 YNILISGY 282
Y I GY
Sbjct: 463 YRAFIDGY 470
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 88 EVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKR-GVQPDVISYTILMDGYC 146
E + ++ + + +FN +M + ++G + EM + G P+V SY +LM+ YC
Sbjct: 233 EAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYC 292
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ + +A K+++ M G+V D+ +YN +I G C V +A L DM K + +
Sbjct: 293 ARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCL 352
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE----QHLDKANKI 262
TY++L +G C+ G + M +G LT ++E LC+ Q + +A I
Sbjct: 353 TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT-IEALVEGLCDDRDGQRVVEAADI 411
Query: 263 FNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
+ E P+ Y +L+ C++G++D A++I M + ET++ I+ +
Sbjct: 412 VKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 102/201 (50%), Gaps = 9/201 (4%)
Query: 23 QELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH 82
+E+E PN+ YN ++ C GL+++A+K+ EM RG+ D+V ++++I G C
Sbjct: 269 REMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCS 328
Query: 83 ADQWKEVRLLLNENSLD----VC-SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
+ + + L + L C ++ +++ CK G + V EM ++G + D ++
Sbjct: 329 NFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT 388
Query: 138 YTILMDGYC----LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLC 193
L++G C + V+ A + D + EA P Y +L++ C+ ++D A+N+
Sbjct: 389 IEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQ 448
Query: 194 EDMLTKNLVPNAVTYKYLFDG 214
+M+ K P+ TY+ DG
Sbjct: 449 AEMVGKGFKPSQETYRAFIDG 469
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 131 VQPDVISYTILMDGYCLKCKVDKARKLF-DMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
++P+ ++ +M + + + + +++ +M E G P+V+SYN+L++ YC + EA
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
+ E+M + +V + V Y + GLC + A M +G +E
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG------------IE 348
Query: 250 TLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSET 309
C +Y L++GYCK G VD + +Y+ M + D T
Sbjct: 349 CTC--------------------LTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLT 388
Query: 310 FKLLINAFCKRKQCDKAI 327
+ L+ C + + +
Sbjct: 389 IEALVEGLCDDRDGQRVV 406
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
VDEA + M+ K + PNA T+ + R G M P++ YN
Sbjct: 231 VDEA----KKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYN 285
Query: 246 IILETLCEQHL-DKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+++E C + L +A K++ + ++ +YN +I G C N V +A ++++M L+
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLK 345
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
I T++ L+N +CK D + +Y+
Sbjct: 346 GIECTCLTYEHLVNGYCKAGDVDSGLVVYRE 376
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 49/298 (16%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY------------- 145
DV S+++I+ AL ++ L V M+ GV PD+ TI MD +
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 146 ----------------------CLKCKVDKARKLFDMMIEAGLVP-DVWSYNILIQGYCK 182
C + V A+ +F+ + G +P D SYNI+I G+ K
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSK 267
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
+ V+E + ++M+ P+ ++Y +L +GL R GR+ D+ + ++G+ PD
Sbjct: 268 LGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN-VPDAN 326
Query: 243 PYN-IILETLCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
YN +I + + D++ + + ++ EPN+++Y+ L+SG K +V +A+ I++ M
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDL------CPFKILMDGLRKNG 350
R ++ + + C A+ +Y+ +R +K+L+ L + G
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 136/328 (41%), Gaps = 15/328 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V P+L + + V +A +L E G+ +F++L+ C +
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAK 241
Query: 91 LLLNENS----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ N D CS+NI++ K G + E V EM++ G PD +SY+ L++G
Sbjct: 242 SVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLG 301
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+++ + ++FD + G VPD YN +I + DE+M ML + PN
Sbjct: 302 RTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLE 361
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD--LTPYNIILETLCEQHLDKANKIFN 264
TY L GL + ++ DA M RG P +T + L+ LC A +
Sbjct: 362 TYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF---LKPLCSYGPPHAAMVIY 418
Query: 265 SLIPEPNVQ----SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ + +Y +L+ + G+ ++++ M D E ++ +++ C
Sbjct: 419 QKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCII 478
Query: 321 KQCDKAIALYKN--NRDLCPFKILMDGL 346
+ A+ + + + CP + + L
Sbjct: 479 GHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 18/273 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEAL--QLVK----PNLVIYNTVIHGLCKDGLVNKAQ 55
Y ++SG K + ++E+E + ++V+ P+ + Y+ +I GL + G +N +
Sbjct: 258 YNIMISGWSK-------LGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 56 KLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDAL 110
++ + +G PD ++++I F A + E R+L E ++ +++ ++ L
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
K + +A + EM+ RGV P T + C A ++ +AG
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
+Y +L++ + + +N+ ++M + Y+Y+ DGLC G L +A +
Sbjct: 431 SAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEE 490
Query: 231 MHYRGHRPPDLTPYNIILETLCEQHLDKANKIF 263
+G P + + + + A K+F
Sbjct: 491 AMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 147/299 (49%), Gaps = 52/299 (17%)
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD------ 159
++ LCK G + EA + + +R DV+++T ++ GY + +AR+LFD
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 160 ----------------------MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
M+ + +V S+N +I GY + R+D+A+ L ++M
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HL 256
+N+ V++ + L + GR+ +A N RM R D+ + +++ L + +
Sbjct: 168 ERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRR-----DVVSWTAMVDGLAKNGKV 218
Query: 257 DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
D+A ++F+ + PE N+ S+N +I+GY +N R+DEA ++Q M RD ++ +I
Sbjct: 219 DEARRLFDCM-PERNIISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITG 273
Query: 317 FCKRKQCDKAIALYKN--NRDLCPFKILMDGLRKNGMEEVAQRV-SQLY--GACDPDVA 370
F + ++ +KA L+ +++ + ++ G +N E A V S++ G+ P+V
Sbjct: 274 FIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 87/297 (29%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ ++SG +SK A QE+ + N+V +NT+I G + G ++KA +L EM
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMP-----ERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+R I S+N ++ AL ++G + EA
Sbjct: 167 PERNI----------------------------------VSWNSMVKALVQRGRIDEAMN 192
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
+ M +R DV+S+T ++DG KVD+AR+LFD M E ++ S+N +I GY
Sbjct: 193 LFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYA 244
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ R+DEA L + M ++ +WN
Sbjct: 245 QNNRIDEADQLFQVMPERDFA---------------------SWN--------------- 268
Query: 242 TPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+I + + ++KA +F+ + PE NV S+ +I+GY +N +EA++++ M
Sbjct: 269 ---TMITGFIRNREMNKACGLFDRM-PEKNVISWTTMITGYVENKENEEALNVFSKM 321
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 112/212 (52%), Gaps = 17/212 (8%)
Query: 152 DKARKLFDM---MIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
D++ +LF++ + + P V LI CK+ ++ EA L + + +++V T+
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVV----TW 80
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP 268
++ G + G + +A R+ R + +T ++ L + L A +F + P
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSRKNV---VTWTAMVSGYLRSKQLSIAEMLFQEM-P 136
Query: 269 EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
E NV S+N +I GY ++GR+D+A+ ++ M RNIV ++ ++ A +R + D+A+
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMN 192
Query: 329 LYKN--NRDLCPFKILMDGLRKNGMEEVAQRV 358
L++ RD+ + ++DGL KNG + A+R+
Sbjct: 193 LFERMPRRDVVSWTAMVDGLAKNGKVDEARRL 224
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 13/320 (4%)
Query: 14 GSGNAIQTLQELEAL--QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVV 71
G+ N + L+ +++ + K N+ I N+++ L K+G ++ KL +M + G+ PDVV
Sbjct: 143 GAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVV 202
Query: 72 TFSSLIYGFCHADQW--KEVRLL----LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYE 125
T+++L+ G K + L+ N +D + ++ G EA +
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQ 262
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M G P++ Y+ L++ Y K KA +L M GLVP+ L++ Y K
Sbjct: 263 MKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGL 322
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
D + L ++ + N + Y L DGL + G+L +A + M +G R D +
Sbjct: 323 FDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVR-SDGYANS 381
Query: 246 IILETLCEQHLDKANKIFN----SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
I++ LC K K + + + ++ N ++ YC+ G ++ M + + M +
Sbjct: 382 IMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Query: 302 NIVRDSETFKLLINAFCKRK 321
+ D TF +LI F K K
Sbjct: 442 AVSPDYNTFHILIKYFIKEK 461
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 27/342 (7%)
Query: 7 SGLCKSKGSGNAIQTLQELEA-LQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG 65
S + + + S + + +LQ L L++ N+++ + I G +D + +L M Q G
Sbjct: 74 SAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLI-----QLFEWMQQHG 128
Query: 66 IFPDVVTFSSLI--YGFCHADQWKEVRLLLNENSLDVCSF--NIIMDALCKQGLLLEAHA 121
V T+SS I G + + E+ + + S + + N I+ L K G L
Sbjct: 129 KI-SVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIK 187
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCK--VDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ +M + G++PDV++Y L+ G C+K K KA +L + G+ D Y ++
Sbjct: 188 LFDQMKRDGLKPDVVTYNTLLAG-CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAI 246
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
R +EA N + M + PN Y L + G A +T M G
Sbjct: 247 CASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG---- 302
Query: 240 DLTPYNIILETLCEQHL-----DKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEA 291
L P +++ TL + ++ D++ ++ + L N Y +L+ G K G+++EA
Sbjct: 303 -LVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN 333
SI+ +M + + D ++I+A C+ K+ +A L +++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 144/327 (44%), Gaps = 37/327 (11%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ GL ++ + ++L+ ++ K + YN IHG G ++ A L EM +R
Sbjct: 218 LLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKER 277
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCY 124
S +YG D+C++N ++ LC G +A V
Sbjct: 278 ----------SSVYGSSFGP--------------DICTYNSLIHVLCLFGKAKDALIVWD 313
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
E+ G +PD +Y IL+ G C ++D A +++ M G VPD YN L+ G K
Sbjct: 314 ELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKAR 373
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
+V EA L E M+ + + + TY L DGL R GR + + +G +T +
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAIT-F 432
Query: 245 NIILETLC-EQHLDKANKIFNSLIPEPNVQSYNI-------LISGYCKNGRVDEAMSIYQ 296
+I+ LC E L+ A K L+ E + +++ L+ G+ K GR D + +
Sbjct: 433 SIVGLQLCREGKLEGAVK----LVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMK 488
Query: 297 NMCLRNIVRDSETFKLLINAFCKRKQC 323
++ N+V + + + A KR Q
Sbjct: 489 HIREGNLVPNVLRWNAGVEASLKRPQS 515
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV------PDVWSYNILIQGYCKIERVD 187
D SY I + G+ +D A LF M E V PD+ +YN LI C +
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 188 EAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
+A+ + +++ P+ TY+ L G C+ R+ DA M Y G PD YN +
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGF-VPDTIVYNCL 365
Query: 248 LE-TLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
L+ TL + + +A ++F ++ E + +YNILI G +NGR + +++ ++ +
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 304 VRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
D+ TF ++ C+ + + A+ L + + DL L+ G K G
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQG 478
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 148/357 (41%), Gaps = 65/357 (18%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
K + Y+ + +C+ GL+ + L M + G+ D L+ + +++
Sbjct: 89 KHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALG 148
Query: 92 LLN-----ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPD--------VISY 138
+L+ + L+ ++ ++ AL K+ L A ++ +++++ ++SY
Sbjct: 149 VLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSY 208
Query: 139 ---TILMDGYCLKCKVDKARKLFDMMIEA--GLVP---DVWSYNILIQGYCKIERVDEAM 190
T+ ++ + + R F + E G+ D WSYNI I G+ +D A+
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 191 NLCEDMLTKNLV------PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
+L ++M ++ V P+ TY L LC FG+ DA + GH
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH-------- 320
Query: 245 NIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIV 304
EP+ +Y ILI G CK+ R+D+AM IY M V
Sbjct: 321 ------------------------EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV 356
Query: 305 RDSETFKLLINAFCKRKQCDKAIALYKNN-----RDLC-PFKILMDGLRKNGMEEVA 355
D+ + L++ K ++ +A L++ R C + IL+DGL +NG E
Sbjct: 357 PDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 72 TFSSLIYGFCHADQWKEVRLLLN---EN--SLDVCSFNIIMDALCKQGLLLEAHAVCYEM 126
T++S++ F ++ R +L+ EN + D+ ++N+I+ L K G A AV +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERV 186
K+G D++ Y L++ ++D+A +LFD M G+ PDV SYN +I+ K ++
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 187 DEAMNLCEDMLTKNLVPNAVT 207
EA + ML +PN VT
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT 772
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
++N +M + K+G A V +M + D+ +Y +++ G + D A + D +
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+ G D+ YN LI K R+DEA L + M + + P+ V+Y + + + G+L
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA 259
+A+ +L M G P +T + IL+ L ++ ++KA
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVT--DTILDYLGKE-MEKA 786
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP-DVWSYNILIQGYCKIERVDEAMNL 192
DV + Y K + A KLF++ G+ ++YN ++ + K A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
+ M + TY + GL + GR A L R+ +G D+ YN ++ L
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGY-LDIVMYNTLINALG 711
Query: 253 E-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNM----CLRNIV 304
+ LD+A ++F+ + P+V SYN +I K G++ EA + M CL N V
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Query: 305 RDS 307
D+
Sbjct: 772 TDT 774
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++MS K KG + + + ++ YN +I GL K G + A + +
Sbjct: 633 YNSMMSSFVK-KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL-----NENSLDVCSFNIIMDALCKQGLL 116
++G + D+V +++LI A + E L N + DV S+N +++ K G L
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 117 LEAHAVCYEMIKRGVQPDVISYTIL 141
EA+ M+ G P+ ++ TIL
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 10/273 (3%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ LCK K A L +L++ + PN +N IHG CK V +A EM
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLKSH--ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGH 253
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLLLEA 119
G P V++++++I +C ++ +V +L+E + + ++ IM +L Q EA
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDM-MIEAGLVPDVWSYNILIQ 178
V M + G +PD + Y L+ ++++A ++F + M E G+ + +YN +I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 179 GYCKIERVDEAMNLCEDMLTKNLV-PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
YC + D+A+ L ++M + NL P+ TY+ L + G + + L M + H
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 238 PPDLTPYNIILETLCEQHL-DKANKIFNSLIPE 269
D + Y +++ LC ++ + A +F +I +
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 33/353 (9%)
Query: 35 LVIYNTV---IHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
LV NTV + G +A + + + G+ + + + L+ C + ++ R+
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 92 LL----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+L + + + +FNI + CK + EA EM G +P VISYT ++ YC
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ + K ++ M G P+ +Y ++ + +EA+ + M P+++
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP-----DLTPYNIILETLCEQHLDKANKI 262
Y L L R GRL +A +R P + + YN ++ C H D+ +K
Sbjct: 332 YNCLIHTLARAGRLEEAERV-----FRVEMPELGVSINTSTYNSMIAMYC--HHDEEDKA 384
Query: 263 F-------NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR-NIVRDSETFKLLI 314
+S + P+V +Y L+ K G V E + + M + ++ D T+ LI
Sbjct: 385 IELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Query: 315 NAFCKRKQCDKAIALYKN--NRDLCPFK----ILMDGLRKNGMEEVAQRVSQL 361
C+ C+ A L++ ++D+ P +L++ ++K M E A+R+ +
Sbjct: 445 QRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHI 497
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 10/273 (3%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ LCK K A L +L++ + PN +N IHG CK V +A EM
Sbjct: 196 LLDTLCKEKRVEQARVVLLQLKSH--ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGH 253
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMDALCKQGLLLEA 119
G P V++++++I +C ++ +V +L+E + + ++ IM +L Q EA
Sbjct: 254 GFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEA 313
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDM-MIEAGLVPDVWSYNILIQ 178
V M + G +PD + Y L+ ++++A ++F + M E G+ + +YN +I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 179 GYCKIERVDEAMNLCEDMLTKNLV-PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
YC + D+A+ L ++M + NL P+ TY+ L + G + + L M + H
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 238 PPDLTPYNIILETLCEQHL-DKANKIFNSLIPE 269
D + Y +++ LC ++ + A +F +I +
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQ 466
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 154/353 (43%), Gaps = 33/353 (9%)
Query: 35 LVIYNTV---IHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
LV NTV + G +A + + + G+ + + + L+ C + ++ R+
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 92 LL----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+L + + + +FNI + CK + EA EM G +P VISYT ++ YC
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ + K ++ M G P+ +Y ++ + +EA+ + M P+++
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP-----DLTPYNIILETLCEQHLDKANKI 262
Y L L R GRL +A +R P + + YN ++ C H D+ +K
Sbjct: 332 YNCLIHTLARAGRLEEAERV-----FRVEMPELGVSINTSTYNSMIAMYC--HHDEEDKA 384
Query: 263 F-------NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR-NIVRDSETFKLLI 314
+S + P+V +Y L+ K G V E + + M + ++ D T+ LI
Sbjct: 385 IELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Query: 315 NAFCKRKQCDKAIALYKN--NRDLCPFK----ILMDGLRKNGMEEVAQRVSQL 361
C+ C+ A L++ ++D+ P +L++ ++K M E A+R+ +
Sbjct: 445 QRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHI 497
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 177/390 (45%), Gaps = 56/390 (14%)
Query: 30 LVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
+P++ + ++ K G + A+K+ M +R +F T+S++I + ++W+EV
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREV 165
Query: 90 ----RLLLNENSL-----------------DVCSFNIIMDALCKQGL---------LLEA 119
RL++ + L DV + +I + K G+ +L
Sbjct: 166 AKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 120 HAVCYEM------IKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
+A C E+ +R + DVI++ ++ YC K ++A +L M + G+ P + ++
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
NILI GY ++ + D AM+L + M T + + T+ + GL G A + +M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 234 RGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
G P +T + + C + +++ +++ + + +V N L+ Y K G++++
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD------LCPFKILMD 344
A ++ + ++N +D T+ +I +C+ C KA L+ +D + + ++
Sbjct: 406 ARKVFDS--VKN--KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 345 GLRKNGMEEVAQRVSQLYGACDPDVALVRN 374
G KNG E A L+ + D + RN
Sbjct: 462 GYIKNGDEGEAM---DLFQRMEKDGKVQRN 488
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 48/343 (13%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL--IYGFCHADQWKE 88
V P+ ++ ++ G G V + + S +I+ G+ + +S+ +Y C +
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA- 235
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
+ DV ++N ++ A C+ G EA + EM K G+ P ++++ IL+ GY
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
K D A L M G+ DV+++ +I G +A+++ M +VPNAVT
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 209 -----------------------------------KYLFDGLCRFGRLPDAWNFLTRMHY 233
L D + G+L DA R +
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA-----RKVF 410
Query: 234 RGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVD 289
+ D+ +N ++ C+ + KA ++F + PN+ ++N +ISGY KNG
Sbjct: 411 DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 290 EAMSIYQNMCLRNIV-RDSETFKLLINAFCKRKQCDKAIALYK 331
EAM ++Q M V R++ T+ L+I + + + D+A+ L++
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 51/325 (15%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +++ C++ A++ ++E+E + + P LV +N +I G + G + A L +M
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEK-EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFN--IIMDALC-------- 111
GI DV T++++I G H + + + L N IM A+
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
QG E H++ +K G DV+ L+D Y K++ ARK+FD + DV+
Sbjct: 369 NQGS--EVHSIA---VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVY 419
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
++N +I GYC+ +A L M NL PN +T+ + G + G +A + RM
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 232 HYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEA 291
+K K+ + N ++N++I+GY +NG+ DEA
Sbjct: 480 -------------------------EKDGKV------QRNTATWNLIIAGYIQNGKKDEA 508
Query: 292 MSIYQNMCLRNIVRDSETFKLLINA 316
+ +++ M + +S T L+ A
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPA 533
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 140/328 (42%), Gaps = 47/328 (14%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+PN +I + LC++G + +A+K + Q+G T+ L+
Sbjct: 44 EPN-IIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLL-------------- 88
Query: 92 LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK- 150
E+ +D S ++ G +L A + +PDV T L+ Y KC
Sbjct: 89 ---ESCIDSGSIHL--------GRILHARFGLF------TEPDVFVETKLLSMYA-KCGC 130
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
+ ARK+FD M E L ++++ +I Y + R E L M+ ++P+ +
Sbjct: 131 IADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE 269
+ G G + +A + + + L N IL + LD A K F + E
Sbjct: 187 ILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM-RE 244
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
+V ++N ++ YC+NG+ +EA+ + + M I T+ +LI + + +CD A+ L
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Query: 330 YKN------NRDLCPFKILMDGLRKNGM 351
+ D+ + ++ GL NGM
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGM 332
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 20/248 (8%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T++SG K+ G A+ Q +E V+ N +N +I G ++G ++A +L +M
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 62 IQRGIFPDVVTFSSLI---YGFCHADQWKEVRLLLNENSLDVCSF--NIIMDALCKQGLL 116
P+ VT SL+ A +E+ + +LD N + D K G +
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDI 575
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + M + D+I++ L+ GY L A LF+ M G+ P+ + + +
Sbjct: 576 EYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 177 IQGYCKIERVDEAMNLCEDMLTK-NLVP-----NAVTYKYLFDGLCRFGRLPDAWNFLTR 230
I + + VDE + + +++P +A+ Y Y R RL +A F+
Sbjct: 632 ILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLY-----GRANRLEEALQFIQE 686
Query: 231 MHYRGHRP 238
M+ + P
Sbjct: 687 MNIQSETP 694
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 120/287 (41%), Gaps = 14/287 (4%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
++ +N++I G C+ G KA +L + M + P+++T++++I G+ E L
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 94 NENSLD------VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
D ++N+I+ + G EA + +M P+ ++ L+
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
R++ ++ L N L Y K ++ + + M TK+++ T
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII----T 592
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
+ L G G A +M +G P T +IIL ++D+ K+F S+
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIA 652
Query: 268 PE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+ P ++ + ++ Y + R++EA+ Q M +++ E+F
Sbjct: 653 NDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 18/343 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y +M L K+ A+ ++ + LV+ + + ++ GLCK G + + ++
Sbjct: 230 LYNRIMDALVKNGYFDLALAVYEDFKEDGLVEES-TTFMILVKGLCKAGRIEEMLEILQR 288
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQ-------WKEVRLLLNENSLDVCSFNIIMDALCKQ 113
M + PDV ++++I W E+R +E DV ++ ++ LCK
Sbjct: 289 MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR--DEIKPDVMAYGTLVVGLCKD 346
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G + + + EM + + D Y +L++G+ KV A L++ ++++G + D+ Y
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N +I+G C + +VD+A L + + + L P+ T + RL D N L R+
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 234 RGHRPPD-LTPYNIILETLC--EQHLDKANKIFNSLIPEPN--VQSYNILISGYCKNGRV 288
G+ D LT + + LC E+ A +F L + + V YNIL+ K G +
Sbjct: 467 LGYPVSDYLTQF---FKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDI 523
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+++S++ M DS ++ + I F ++ A + ++
Sbjct: 524 QKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHE 566
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 5/238 (2%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D ++N L + G A + M +G P + IL+ + + + ++
Sbjct: 157 DFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVY 216
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ M + G P V+ YN ++ K D A+ + ED LV + T+ L GLC+
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKA 276
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL-CEQHLDKANKIFNSLIPE---PNVQS 274
GR+ + L RM +P D+ Y +++TL E +LD + ++++ + + P+V +
Sbjct: 277 GRIEEMLEILQRMRENLCKP-DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
Y L+ G CK+GRV+ ++ M + I+ D E +++LI F + A L+++
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWED 393
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 35/304 (11%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
K + YN + L ++G A +L M +G P F LI HAD + +R+
Sbjct: 155 KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR--MHADNRRGLRV 212
Query: 92 LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
+ V +M K G +P V Y +MD
Sbjct: 213 ----------------------------YYVYEKMKKFGFKPRVFLYNRIMDALVKNGYF 244
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
D A +++ E GLV + ++ IL++G CK R++E + + + M P+ Y +
Sbjct: 245 DLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAM 304
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEP 270
L G L + M R PD+ Y ++ LC+ +++ ++F + +
Sbjct: 305 IKTLVSEGNLDASLRVWDEMR-RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQ 363
Query: 271 ---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
+ + Y +LI G+ +G+V A ++++++ + D + +I C Q DKA
Sbjct: 364 ILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAY 423
Query: 328 ALYK 331
L++
Sbjct: 424 KLFQ 427
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 153/369 (41%), Gaps = 48/369 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGTL+ GLCK + E++ Q++ + IY +I G DG V A L ++
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQIL-IDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN---ENSLD------------------V 100
+ G D+ ++++I G C +Q + L E L+ +
Sbjct: 395 VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRL 454
Query: 101 CSFNIIMDALCKQGLLL---------------EAHAVC---YEMIKRGVQPDVISYTILM 142
F+ +++ + + G + E +A+ + ++K V Y ILM
Sbjct: 455 SDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILM 514
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
+ + K+ LF M + G PD SY+I I + + V A + E ++ + V
Sbjct: 515 EALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCV 574
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG-HRPPDLTPYNIILETLCE-QHLDKAN 260
P+ Y L GLC+ G + DA L R P Y + + +C+ + +K
Sbjct: 575 PSIAAYLSLTKGLCQIGEI-DAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVM 633
Query: 261 KIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE--TFKLLIN 315
K+ + + E N Y +ISG K+G + A ++ + R ++ +++ ++ ++
Sbjct: 634 KVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLI 693
Query: 316 AFCKRKQCD 324
K+K D
Sbjct: 694 EQTKKKTAD 702
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 37/224 (16%)
Query: 103 FNIIMDALCK-QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
N I+D L +G L +A + GV P+ SY +LM +CL + A +LF M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+E +VPDV SY ILIQG+C+ +V+ AM L +DML K VP+ + L GLC G
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMF 272
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISG 281
+ +L M +G P+ N L+ G
Sbjct: 273 DEGKKYLEEMISKGF--------------------------------SPHFSVSNCLVKG 300
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+C G+V+EA + + + S+T++++I C + +K
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
S+N++M A C L A+ + +M++R V PDV SY IL+ G+C K +V+ A +L D M
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM 251
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+ G VPD LI G C DE E+M++K P+ L G C FG++
Sbjct: 252 LNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 307
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIF 263
+A + + + G T + +++ +C + + K+F
Sbjct: 308 EEACDVVEVVMKNGETLHSDT-WEMVIPLICNEDESEKIKLF 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 28 LQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK 87
L V PN YN ++ C + ++ A +L +M++R + PDV ++ LI GFC Q
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 88 EVRLLLNENSLDVCSFNIIMD-----ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
LL+ D+ + + D LC QG+ E EMI +G P L+
Sbjct: 243 GAMELLD----DMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 298
Query: 143 DGYCLKCKVDKARKLFDMMIEAG--LVPDVW 171
G+C KV++A + +++++ G L D W
Sbjct: 299 KGFCSFGKVEEACDVVEVVMKNGETLHSDTW 329
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 239 PDLTPYNIILETLCEQ--HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMS 293
P N IL+ L +L KA ++F S PN +SYN+L+ +C N + A
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCPFKILMDGLRKNGM 351
++ M R++V D +++K+LI FC++ Q + A+ L + N+ P + L+ GL GM
Sbjct: 212 LFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCDQGM 271
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 153/329 (46%), Gaps = 24/329 (7%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V + N ++ LC+ + A ++ EM +G +PD ++ L+ GFC + +E
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 91 LLL---------NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
LL + D+ + I++DALC G + +A + +++++G++ Y +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 142 MDGYCLKCK--VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
G+ +++ ++L + G +P + SY+ + + ++ E + M +K
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ----- 254
P Y LCR G+L +A + + + +GH P + YN++++ LC+
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 255 ---HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFK 311
+L K +K + + N ++Y L+ G C++G+ EA + + M +++ ET+
Sbjct: 388 AVGYLKKMSKQVSCV---ANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 312 LLINAFCKRKQCDKAIALYKN--NRDLCP 338
++I C + +A+ + ++D+ P
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 107/214 (50%), Gaps = 10/214 (4%)
Query: 13 KGSGNAIQTLQELEALQLVK---PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD 69
+ S I+ ++ L L++ P L Y+ + L ++G + + +++ M +G P
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNENSLD------VCSFNIIMDALCKQGLLLEAHAVC 123
+ + + C A + KE ++N+ + V +N+++ LC G +EA
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL 392
Query: 124 YEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK 182
+M K+ + +Y L+DG C + +A ++ + M+ P V +Y+++I+G C
Sbjct: 393 KKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCD 452
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
++R EA+ E+M+++++VP + +K L + +C
Sbjct: 453 MDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYN-TVIHGLCKDGLVNKAQKLCS 59
+Y L+ LC + +AI+ L ++ L P ++ H + + ++L +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHAD---QWKEVRLLLNENSLDVCSF--NIIMDALCKQG 114
E + RG P + ++S++ + +EV L + + F + ALC+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 115 LLLEAHAVC-YEMIKRGVQPDVISYTILMDGYCLKCK-VDKARKLFDMMIEAGLVPDVWS 172
L EA +V EM++ P V Y +L+ G C K ++ L M + V + +
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
Y L+ G C+ + EA + E+ML K+ P TY + GLC R +A +L M
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM- 466
Query: 233 YRGHRPPDLTPYNIILETLC 252
P+ + + + E++C
Sbjct: 467 VSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 153/329 (46%), Gaps = 24/329 (7%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
V + N ++ LC+ + A ++ EM +G +PD ++ L+ GFC + +E
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 91 LLL---------NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
LL + D+ + I++DALC G + +A + +++++G++ Y +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 142 MDGYCLKCK--VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
G+ +++ ++L + G +P + SY+ + + ++ E + M +K
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ----- 254
P Y LCR G+L +A + + + +GH P + YN++++ LC+
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSME 387
Query: 255 ---HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFK 311
+L K +K + + N ++Y L+ G C++G+ EA + + M +++ ET+
Sbjct: 388 AVGYLKKMSKQVSCV---ANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYH 444
Query: 312 LLINAFCKRKQCDKAIALYKN--NRDLCP 338
++I C + +A+ + ++D+ P
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVP 473
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 107/214 (50%), Gaps = 10/214 (4%)
Query: 13 KGSGNAIQTLQELEALQLVK---PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD 69
+ S I+ ++ L L++ P L Y+ + L ++G + + +++ M +G P
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNENSLD------VCSFNIIMDALCKQGLLLEAHAVC 123
+ + + C A + KE ++N+ + V +N+++ LC G +EA
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYL 392
Query: 124 YEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK 182
+M K+ + +Y L+DG C + +A ++ + M+ P V +Y+++I+G C
Sbjct: 393 KKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCD 452
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
++R EA+ E+M+++++VP + +K L + +C
Sbjct: 453 MDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYN-TVIHGLCKDGLVNKAQKLCS 59
+Y L+ LC + +AI+ L ++ L P ++ H + + ++L +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHAD---QWKEVRLLLNENSLDVCSF--NIIMDALCKQG 114
E + RG P + ++S++ + +EV L + + F + ALC+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 115 LLLEAHAVC-YEMIKRGVQPDVISYTILMDGYCLKCK-VDKARKLFDMMIEAGLVPDVWS 172
L EA +V EM++ P V Y +L+ G C K ++ L M + V + +
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
Y L+ G C+ + EA + E+ML K+ P TY + GLC R +A +L M
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM- 466
Query: 233 YRGHRPPDLTPYNIILETLC 252
P+ + + + E++C
Sbjct: 467 VSQDMVPESSVWKALAESVC 486
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 11/280 (3%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLF 158
V SFN ++ A L EA E+ ++ G+ PD+++Y ++ C K +D +F
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ + + G PD+ S+N L++ + + E E + + M +KNL PN +Y GL R
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL-CEQHLDKANKIFNSLIPE---PNVQS 274
+ DA N + M G P D+ YN ++ + +L++ K +N + + P+ +
Sbjct: 277 KKFTDALNLIDVMKTEGISP-DVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR 334
Y +LI CK G +D A+ + + ++ +K ++ + D+A L KN +
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Query: 335 DLCPFKILMD---GLRKNGMEEVAQ--RVSQLYGACDPDV 369
F+ L D G +K V+ + + + PD
Sbjct: 396 LQSYFRYLPDLSAGKKKTTSSPVSSSAKTTSTPVSSSPDT 435
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 152/318 (47%), Gaps = 18/318 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKP-NLVIYNTVIHGLCKDGLVNKAQKLCS 59
+Y + L ++K + LQ + +K + VI +++G G+ A KL
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAHKLFD 146
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE------NSLDVCSFNIIMDALCKQ 113
EM + V +F++L+ + ++ + E E + D+ ++N ++ ALC++
Sbjct: 147 EMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRK 206
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G + + ++ E+ K G +PD+IS+ L++ + + + +++D+M L P++ SY
Sbjct: 207 GSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N ++G + ++ +A+NL + M T+ + P+ TY L L + M
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 234 RGHRPPDLTPYNIILETLCEQ-HLDKA-----NKIFNSLIPEPNVQSYNILISGYCKNGR 287
+G PD Y +++ LC++ LD+A I + L+ PN+ Y ++ G+
Sbjct: 327 KG-LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGK 383
Query: 288 VDEAMSIYQNMCLRNIVR 305
+DEA + +N L++ R
Sbjct: 384 IDEATQLVKNGKLQSYFR 401
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 19/339 (5%)
Query: 41 VIHGLCKDGLVNKAQKLCSEMIQR-GIFPDVVTFSSLIYGFCHA---DQWKEVRL-LLNE 95
V+ L K G NKA EM + G+ D + +SL+ + EV L L +
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT 268
Query: 96 NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
D +FNI++ CK +A A+ M PDV++YT ++ YC + +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
++ + M E G P+V +Y I++ K ++V EA+ + E M VP+A Y L L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIPE----- 269
+ GR DA M +G R D+ YN ++ D+ A ++ + E
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVR-RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC 447
Query: 270 -PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
PNV++Y L+ C ++ + +M ++ D T+ LLI C + ++A
Sbjct: 448 SPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACL 507
Query: 329 LYKN--NRDLCPF----KILMDGLRKNGMEEVAQRVSQL 361
++ + + P K+L+D L K M E ++ L
Sbjct: 508 FFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSL 546
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 142/334 (42%), Gaps = 42/334 (12%)
Query: 4 TLMSGLCKSKGSGNAIQTLQE--LEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+LM L K N+I+ E L+ +KP+ +N +IHG CK + A+ + M
Sbjct: 244 SLMDALVKE----NSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLM 299
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
PDVVT++S + +C ++ V +L
Sbjct: 300 KVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLE--------------------------- 332
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
EM + G P+V++YTI+M +V +A +++ M E G VPD Y+ LI
Sbjct: 333 ---EMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH-YRGHR-PP 239
K R +A + EDM + + + + Y + R A L RM G P
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 449
Query: 240 DLTPYNIILETLCEQHLDKANKI-FNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIY 295
++ Y +L+ C + K I + ++ +V +Y +LI G C +G+V+EA +
Sbjct: 450 NVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFF 509
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ + +V T K+L++ K+ + + +
Sbjct: 510 EEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 149/370 (40%), Gaps = 77/370 (20%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
YNT+I K G + +A + M++ GI P VTF+++I+ + + Q EV L+
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 98 L----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
L D ++NI++ K + A A EM G++PD +SY L+ + ++ V++
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 154 ARKLF-------------------DMMIEAGLVPDVWS---------------------- 172
A L M +EA ++ WS
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDA 480
Query: 173 ---------------------------YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
YN++I+ Y + ++A L E M++ + P+
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFN 264
TY L L +L +M G+ D PY ++ + + L+ A +++
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGY-VSDCIPYCAVISSFVKLGQLNMAEEVYK 599
Query: 265 SLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
++ EP+V Y +LI+ + G V +AMS + M I +S + LI + K
Sbjct: 600 EMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 322 QCDKAIALYK 331
D+A A+Y+
Sbjct: 660 YLDEAEAIYR 669
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 166/370 (44%), Gaps = 58/370 (15%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHAD----QW 86
+KP+ V Y T+++ +V +A+ L +EM + D T S+L + A+ W
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457
Query: 87 KEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAV---CYEMIKRGVQPDVISYTILMD 143
+ ++ ++ +DA ++G L EA V C E+ KR VI Y +++
Sbjct: 458 SWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIK 513
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ----------GYCKIERVDEA---- 189
Y + +KA +LF+ M+ G+ PD +YN L+Q G C +E++ E
Sbjct: 514 AYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS 573
Query: 190 -----------------MNLCE----DMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+N+ E +M+ N+ P+ V Y L + G + A +++
Sbjct: 574 DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633
Query: 229 TRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE------PNVQSYNILISG 281
M G P + YN +++ + +LD+A I+ L+ P+V + N +I+
Sbjct: 634 EAMKEAG-IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINL 692
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKI 341
Y + V +A +I+ +M R + TF +++ + K + ++A + K R++ KI
Sbjct: 693 YSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQMREM---KI 748
Query: 342 LMDGLRKNGM 351
L D L N +
Sbjct: 749 LTDPLSYNSV 758
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 149/358 (41%), Gaps = 51/358 (14%)
Query: 18 AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI 77
A++ + ++ + N++ YN ++ L K Q L EMI++GI P T+ +LI
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 78 YGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCY--EMIKRGVQPDV 135
D K GL + HA+C+ +M K G+QPD
Sbjct: 230 ------------------------------DVYSKGGL--KVHALCWLGKMSKIGMQPDE 257
Query: 136 ISYTILMDGYCLKCKVDKARKLF------DMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
++ I++ Y + KA + F + ++ + ++YN +I Y K ++ EA
Sbjct: 258 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 317
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
+ ML + +VP VT+ + G+L + + + M + H PD YNI++
Sbjct: 318 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM--KLHCAPDTRTYNILIS 375
Query: 250 TLCEQH-LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
+ + +++A F + + P+ SY L+ + V+EA + M N+
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI 435
Query: 306 DSETFKLLINAFCKRKQCDKAIALYK-----NNRDLCPFKILMDGLRKNGMEEVAQRV 358
D T L + + + +K+ + +K N + +D + G A+RV
Sbjct: 436 DEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERV 493
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 25/332 (7%)
Query: 19 IQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLC--SEMIQRGIFPDVVTFSSL 76
+Q+L + + +KP Y T+I K GL K LC +M + G+ PD VT +
Sbjct: 206 VQSLWDEMIRKGIKPINSTYGTLIDVYSKGGL--KVHALCWLGKMSKIGMQPDEVTTGIV 263
Query: 77 IYGFCHADQWKEVRLLL-----NENSLD--VC----SFNIIMDALCKQGLLLEAHAVCYE 125
+ + A ++++ +EN D VC ++N ++D K G + EA
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M++ G+ P +++ ++ Y ++ + L M + PD +YNILI + K
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNND 382
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
++ A ++M L P+ V+Y+ L + +A + M + T
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 246 IILETLCEQHLDKANKIFNSLIPEPNVQS--YNILISGYCKNGRVDEAMSIY---QNMCL 300
+ + + L+K+ F N+ S Y+ I Y + G + EA ++ Q +
Sbjct: 443 LTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNK 502
Query: 301 RNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
R ++ + ++I A+ K C+KA L+++
Sbjct: 503 RTVIE----YNVMIKAYGISKSCEKACELFES 530
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQL--VKPNLVIYNTVIHGLCKDGLVNKAQKLC 58
+YG L++ + GN Q + +EA++ + N VIYN++I K G +++A+ +
Sbjct: 612 VYGVLINAFADT---GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 59 SEMIQ---RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE----NSLDVCSFNIIMDALC 111
+++Q + +PDV T + +I + ++ + + + +F +++
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYK 728
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
K G EA + +M + + D +SY ++ + L + +A + F M+ +G+ PD
Sbjct: 729 KNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDS 788
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
++ L K+ +A+ E++ K +
Sbjct: 789 TFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
M++ + P I+Y ++DG+C + +VD A+++ D M G PDV +++ LI GYCK +R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
VD M + +M + +V N VTY L G C+ G L A + L M G PD ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG-VAPDYITFH 119
Query: 246 IILETLC-EQHLDKANKIFNSL 266
+L LC ++ L KA I L
Sbjct: 120 CMLAGLCSKKELRKAFAILEDL 141
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 30/164 (18%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P + YN++I G CK V+ A+++ M +G PDVVTFS+LI G+C A K V
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA---KRV--- 61
Query: 93 LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+N +++ C EM +RG+ + ++YT L+ G+C +D
Sbjct: 62 --DNGMEI---------FC-------------EMHRRGIVANTVTYTTLIHGFCQVGDLD 97
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
A+ L + MI G+ PD +++ ++ G C + + +A + ED+
Sbjct: 98 AAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 72/127 (56%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
++N ++D CKQ + +A + M +G PDV++++ L++GYC +VD ++F M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
G+V + +Y LI G+C++ +D A +L +M++ + P+ +T+ + GLC L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 222 PDAWNFL 228
A+ L
Sbjct: 132 RKAFAIL 138
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 161 MIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR 220
M+ + P +YN +I G+CK +RVD+A + + M +K P+ VT+ L +G C+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 221 LPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILIS 280
+ + MH RG I+ T+ +Y LI
Sbjct: 61 VDNGMEIFCEMHRRG----------IVANTV----------------------TYTTLIH 88
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
G+C+ G +D A + M + D TF ++ C +K+ KA A+ ++
Sbjct: 89 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 140
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ TL++G CK+K N ++ E+ +V N V Y T+IHG C+ G ++ AQ L +EM
Sbjct: 48 FSTLINGYCKAKRVDNGMEIFCEMHRRGIV-ANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE 95
I G+ PD +TF ++ G C + ++ +L +
Sbjct: 107 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 140
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 41/335 (12%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
N Y +++ V++A + + GI D+V F L+ C + L
Sbjct: 177 NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF 236
Query: 94 ----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
E D+ + N+I++ C G + EA ++I +PDV+SY +++ K
Sbjct: 237 CSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKG 296
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
K+ KA +L+ M + PDV N +I C +R+ EA+ + ++ K PN VTY
Sbjct: 297 KLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYN 356
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGH--RPPDLT------------PYNIILETL---- 251
L LC+ R W + M +G P D+T +I+LE +
Sbjct: 357 SLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNK 416
Query: 252 CEQHLDKANKIFNSLIP-------------------EPNVQSYNILISGYCKNGRVDEAM 292
CE D N +F + P+ ++Y I I G G++ EA+
Sbjct: 417 CEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEAL 476
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
S +Q M + +V + T LL K + DK +
Sbjct: 477 SYFQEMMSKGMVPEPRTEMLLNQNKTKPRVEDKML 511
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
+N I+D L K E H V EM KR + +Y +L++ Y KVD+A +F+
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 163 EAGLVPDVWSY----------------------------------NILIQGYCKIERVDE 188
E G+ D+ ++ N+++ G+C + V E
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE 265
Query: 189 AMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL 248
A +D++ P+ V+Y + + L + G+L A L R + R PD+ N ++
Sbjct: 266 AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAME-LYRAMWDTRRNPDVKICNNVI 324
Query: 249 ETLC-EQHLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+ LC ++ + +A ++F + P+PNV +YN L+ CK R ++ + + M L+
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YGT+++ L K G A++ + + + P++ I N VI LC + +A ++ E+
Sbjct: 285 YGTMINALTKKGKLGKAMELYRAMWDTRR-NPDVKICNNVIDALCFKKRIPEALEVFREI 343
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLD--VCSFN-IIMDALCKQGLLLE 118
++G P+VVT++SL+ C + ++V L+ E L CS N + L K +
Sbjct: 344 SEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSK 403
Query: 119 AHAVCYE-MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
+ E M K + Y ++ Y K +K R+++ M +GL PD +Y I I
Sbjct: 404 DVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRI 463
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
G ++ EA++ ++M++K +VP T
Sbjct: 464 HGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
YN ++ K+ R +E + ++M ++ N TY+ L + ++ +A R
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 233 YRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEP--NVQSYNILISGYCKNGRVD 289
G DL ++ +L LC +H++ A +F S E ++++ N++++G+C G V
Sbjct: 206 EFGI-DDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
EA ++++ D ++ +INA K+ + KA+ LY+
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 19/283 (6%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA----DQWKE 88
+ V YN VI G +N A L EM G++PDV+T++S+I G+C+A D W+
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 89 VRLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG----VQPDVISYTILMD 143
+ + + L+ +++ I++ +CK G + A + EM K + P+ ++YT+++
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLV 202
+C K +V++A + D M G +P+ + +LIQG + + +A++ D L K V
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV 342
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET-LCEQHLDKANK 261
+ + L R R +A M RG RP L ++ E L E++LD
Sbjct: 343 SLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCF-- 400
Query: 262 IFNSLIPEPNVQS------YNILISGYCKNGRVDEAMSIYQNM 298
+ I + +V+S + +L+ G C+ G EA + ++M
Sbjct: 401 LLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSM 443
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 98 LDVCSFNIIMDALCKQG-LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
++V + I++ LC Q L EA V + + V D ++Y +++ + K ++ A
Sbjct: 128 VNVKTMRIVL-TLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADM 186
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
L M GL PDV +Y +I GYC ++D+A L ++M + V N+VTY + +G+C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 217 RFGRLPDAWNFLTRMHYR---GHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE--- 269
+ G + A L M G P+ Y ++++ CE+ +++A + + +
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 270 PNVQSYNILISGYCKNGRVDEAMS-IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
PN + +LI G +N +A+S + + V SE F + + K+ ++A
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 329 LYKNNRDLCPFKILMDGLRKNGM 351
+++ +L+ G+R +G+
Sbjct: 367 IFR--------LMLVRGVRPDGL 381
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 17/232 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQ---LVKPNLVIYNTVIHGLCKDGLVNKAQKLC 58
Y ++ G+CKS A++ L E+E L+ PN V Y VI C+ V +A +
Sbjct: 238 YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVL 297
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL---------LNENSLDVCSFNIIMDA 109
M RG P+ VT LI G D+ +V+ L L SL C F+ +
Sbjct: 298 DRMGNRGCMPNRVTACVLIQGVLENDE--DVKALSKLIDKLVKLGGVSLSEC-FSSATVS 354
Query: 110 LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
L + EA + M+ RGV+PD ++ + + CL + L+ + + +
Sbjct: 355 LIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKST 414
Query: 170 VWS--YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
+ S + +L+ G C+ EA L + ML K + + + + L + G
Sbjct: 415 IDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 20/287 (6%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P+ V + V+H LC+ +V + + + +EM + I D + ++ + + + + L
Sbjct: 408 PDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 93 LNENSLD----VCSFNIIMDALCKQGLLLEAHAVCYEMIKR---GVQPDVISYTILMDGY 145
LD + ++D ++GL +EA V Y KR G + DV+ Y +++ Y
Sbjct: 468 FERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYG--KRNMSGQRNDVLEYNVMIKAY 525
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
+KA LF M G PD +YN L Q ++ VDEA + +ML P
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
TY + R G L DA + M G +P ++ Y ++ E + + +
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV-YGSLINGFAESGMVEEAIQYFR 644
Query: 266 LIPEPNVQSYNI----LISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
++ E VQS +I LI Y K G ++EA +Y M +DSE
Sbjct: 645 MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM------KDSE 685
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 12/298 (4%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
VKPN V+Y ++I+G + G+V +A + M + G+ + + +SLI + +E R
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 91 LLLN-----ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+ + E DV + N ++ G++ EA ++ + ++G DVIS+ +M Y
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLY 734
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT-KNLVPN 204
+D+A ++ + M E+GL+ D S+N ++ Y ++ E L +ML + L+ +
Sbjct: 735 KGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLD 794
Query: 205 AVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP---PDLTPYNIILETLCEQHLDKANK 261
T+K LF L + G +P + Y +P P +T L L+ +
Sbjct: 795 WGTFKTLFT-LLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQE 853
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ + IP + +YN +I Y +G +D A+ Y M + + D T L+ + K
Sbjct: 854 LTSGEIPREHF-AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGK 910
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 156/383 (40%), Gaps = 79/383 (20%)
Query: 32 KPNLV-IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR 90
KP L +NT+I K G +N A L SEM++ G+ D VTF+++I+ E
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 91 LLLNEN-----SLDVCSFNIIM----DA-------------------------------L 110
LL + S D ++NI++ DA L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD----------- 159
C++ ++ E AV EM + ++ D S ++M Y + V +A+ LF+
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST 480
Query: 160 -------------MMIEA-----------GLVPDVWSYNILIQGYCKIERVDEAMNLCED 195
+ +EA G DV YN++I+ Y K + ++A++L +
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 196 MLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH 255
M + P+ TY LF L + +A L M G +P T +I +
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 256 LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
L A ++ ++ +PN Y LI+G+ ++G V+EA+ ++ M + +
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 313 LINAFCKRKQCDKAIALYKNNRD 335
LI A+ K ++A +Y +D
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKD 683
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 137/306 (44%), Gaps = 14/306 (4%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
+++ YN +I K L KA L M +G +PD T++SL D E + +L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 94 NENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
E C ++ ++ + + GLL +A + M K GV+P+ + Y L++G+
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
V++A + F MM E G+ + LI+ Y K+ ++EA + + M P+
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE-----TLCEQHLDKANKIF 263
+ G + +A + + +G D+ + ++ + ++ ++ A ++
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG--TCDVISFATMMYLYKGMGMLDEAIEVAEEMR 751
Query: 264 NSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCL-RNIVRDSETFKLLINAFCKRKQ 322
S + + S+N +++ Y +G++ E ++ M + R ++ D TFK L K
Sbjct: 752 ESGLLS-DCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGV 810
Query: 323 CDKAIA 328
+A++
Sbjct: 811 PSEAVS 816
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 17/282 (6%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
+FN ++D K G L +A + EM+K GV D +++ ++ + +A L
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
M E G+ PD +YNIL+ + ++ A+ + L P+ VT++ + LC+
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNI-- 277
+ + + M R + + I+ + E + +A +F + + S +
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 278 LISGYCKNGRVDEAMSIY---QNMC-LRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN 333
+I Y + G EA +++ +NM RN V + + ++I A+ K K +KA++L+K
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE---YNVMIKAYGKAKLHEKALSLFKGM 541
Query: 334 R------DLCPFKILMDGLRKNGMEEVAQRV--SQLYGACDP 367
+ D C + L L + + AQR+ L C P
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKP 583
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 124/283 (43%), Gaps = 30/283 (10%)
Query: 68 PDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC-----SFNIIMDALCKQGLLLEAHAV 122
P+V+ ++ ++ A +W E+RL E + + ++ +++D K GL+ EA
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 123 CYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN-------- 174
M +R PD ++ ++ + + D+A + F + D+ S +
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 175 ---ILIQGYCKIE--------RVDEAMNLCEDMLTKNLVPN-AVTYKYLFDGLCRFGRLP 222
+ ++ + +E ++++++ + P T+ L D + GRL
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETL-CEQHLDKANKIFNSLIPE---PNVQSYNIL 278
DA N + M G P D +N ++ T HL +A + + + P+ ++YNIL
Sbjct: 323 DAANLFSEMLKSG-VPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 279 ISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+S + G ++ A+ Y+ + + D+ T + +++ C+RK
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 22/351 (6%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC------HADQWKEVR 90
IYN + G CK K +++ M+++ I V ++ + C A KE
Sbjct: 840 IYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFL 899
Query: 91 LLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
LL N V +N+++ + + LE + V EM RGV PD ++ L+ GY
Sbjct: 900 LLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSAD 959
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK--NLVPNAVTY 208
+ + MI G+ P+ S + C V +A++L + M +K NL + V
Sbjct: 960 YSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQT 1019
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLI 267
K + + L G +P A +FLTR+ G P+ Y+ I++ L ++ +LD A + N+++
Sbjct: 1020 K-IVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTML 1075
Query: 268 PE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
P SY+ +I+G + ++D+AM + M + T+ L++ FC+ Q
Sbjct: 1076 KNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVL 1135
Query: 325 KAIALYKNNRDLCP------FKILMDGLRKNGMEEVAQRVSQLYGACDPDV 369
++ L K+ L FK ++D R A + ++ C +V
Sbjct: 1136 ESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEV 1186
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 47/342 (13%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+P++ + N ++H LC+ +A E+ G D VTF LI C+ K L
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 92 LLNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L+E DV S+N I+ L ++GL H + EM + G+ + ++ I++ GYC
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 147 LKCKVDKARKLFDMM-----IEAGLVPDVWSYNILIQG---------------YCKIERV 186
+ ++A+++ + M IEA V D S + G + K E
Sbjct: 440 KARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFF 499
Query: 187 DEAMN---LCEDM----------LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
D+ N L D+ L ++++P + L G L A L M
Sbjct: 500 DDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMAR 556
Query: 234 RGHRPPDLTPYNIILETLCEQ--HLDKANKIFN---SLIPEPNVQSYNILISGYCKNGRV 288
G + + + +++ +LC HL + + L + + ++ N L+ YCK G
Sbjct: 557 WGQKLSRRS-FAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFS 615
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+ I+ M + D+ T+ LI FCK++ + + ++
Sbjct: 616 RHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVW 657
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 125/310 (40%), Gaps = 20/310 (6%)
Query: 22 LQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC 81
L E+E N I+ +I D KA L M ++G+ P + LI
Sbjct: 170 LMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLV 229
Query: 82 HADQ----------WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGV 131
+ W E R LN ++D S +++ LC + EA + +++ G
Sbjct: 230 RVHRTESAYRICLDWVETRAELNHMNID--SIGKVIELLCLDQKVQEARVLARKLVALGC 287
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
+ Y+ + GY K + L + E PDV+ N ++ C+ + A
Sbjct: 288 ILNSSIYSKITIGYNEKQDFED---LLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYV 344
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
E++ + VT+ L C G + A +L+ + +G++ PD+ YN IL L
Sbjct: 345 YMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYK-PDVYSYNAILSGL 403
Query: 252 CEQHLDKANKIFNSLIPEP----NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDS 307
+ L + + E ++ ++ I+++GYCK + +EA I M ++ S
Sbjct: 404 FRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEAS 463
Query: 308 ETFKLLINAF 317
+ L AF
Sbjct: 464 KVEDPLSEAF 473
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 138/374 (36%), Gaps = 90/374 (24%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ LM LC S+ +L E + + N ++ CK G ++ + +M
Sbjct: 566 FAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKM 625
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQ-------WKEVRLLLNENSL-DVCSFNIIMDALCKQ 113
+Q D VT++SLI FC + W + N+N L D+ + + L ++
Sbjct: 626 VQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQ---NDNWLPDLNDCGDLWNCLVRK 682
Query: 114 GLLLE-----------------------------------AHAVCYEMIKRGVQPDVISY 138
GL+ E AH+V + G + Y
Sbjct: 683 GLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVY 742
Query: 139 TILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT 198
L+ G C + K A + D M++ +P + S +LI C+ + A NL E
Sbjct: 743 NHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQ--- 799
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK 258
+ ++ + L GL G++ DA N L M G L+ YN I
Sbjct: 800 ---IDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNG-----LSSYNKI----------- 840
Query: 259 ANKIFNSLIPEPNVQSYNILISGYCKNG---RVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
YN++ GYCK +V+E + + M +NI+ ++++ +
Sbjct: 841 ----------------YNVMFQGYCKGNNWMKVEEVLGL---MVRKNIICSVKSYREYVR 881
Query: 316 AFCKRKQCDKAIAL 329
C Q AI+L
Sbjct: 882 KMCLEPQSLSAISL 895
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 7/267 (2%)
Query: 37 IYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN 96
+YN +I GLC + + A + EM+ + P + + LI C A++ L +
Sbjct: 741 VYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI 800
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK 156
+ +I L G +L+A M+ G+ Y ++ GYC K +
Sbjct: 801 DSSYVHYALI-KGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEE 859
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV-TYKYLFDGL 215
+ +M+ ++ V SY ++ C + A++L E +L P V Y L +
Sbjct: 860 VLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKAN-KIFNSLIP---EPN 271
R + L M RG PD T +N ++ ++ + +++I +PN
Sbjct: 920 FRAKNHLEVNKVLLEMQGRG-VLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPN 978
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNM 298
+S + S C NG V +A+ ++Q M
Sbjct: 979 NRSLRAVTSSLCDNGDVKKALDLWQVM 1005
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 49 GLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSF 103
G +N+A ++ M G +P +F+ ++ A + E+ + +D C
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 104 NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
NI++ LC+ G L A + E ++ +P+V++++ L+ G+C K K ++A KL + M +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 164 AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPD 223
+ PD ++NILI G K RV+E ++L E M K PN TY+ + GL R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 224 AWNFLTRMHYRGHRPPDLTPYNIILETLCE 253
A +++M G RP L+ Y ++ LCE
Sbjct: 326 AKEMMSQMISWGMRPSFLS-YKKMVLGLCE 354
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 3/200 (1%)
Query: 102 SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
SFN I++ L L E H + K GV+ D IL+ G C ++ A +L D
Sbjct: 169 SFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEF 228
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
+ P+V +++ LI+G+C + +EA L E M + + P+ +T+ L GL + GR+
Sbjct: 229 PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRV 288
Query: 222 PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---EPNVQSYNIL 278
+ + L RM +G P T ++ L ++ +A ++ + +I P+ SY +
Sbjct: 289 EEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKM 348
Query: 279 ISGYCKNGRVDEAMSIYQNM 298
+ G C+ V E + + M
Sbjct: 349 VLGLCETKSVVEMDWVLRQM 368
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL 98
N +I GLC+ G + A +L E Q+ P+V+TFS LI GFC+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCN---------------- 249
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
+G EA + M K ++PD I++ IL+ G K +V++ L
Sbjct: 250 --------------KGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLL 295
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
+ M G P+ +Y ++ G +R EA + M++ + P+ ++YK + GLC
Sbjct: 296 ERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCET 355
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
+ + L +M G P L + ++
Sbjct: 356 KSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ GLC+S A+Q L E Q +PN++ ++ +I G C G +A KL M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQ-QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVC-----SFNIIMDALCKQGLLLEA 119
I PD +TF+ LI G + +E LL + C ++ ++ L + LEA
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ +MI G++P +SY ++ G C V + + M+ G VP + ++Q
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQC 386
Query: 180 YCKIERVDEAMNL 192
D NL
Sbjct: 387 VVSKNNDDSQANL 399
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 239 PDLTPYNIILETLCEQHL-DKANKIFNSLIPEPNVQ----SYNILISGYCKNGRVDEAMS 293
P +N IL L L D+ +KIF S P+ V+ NILI G C++G ++ A+
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVS-APKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLR 347
+ + + TF LI FC + + ++A L + D F IL+ GLR
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 348 KNGMEE 353
K G E
Sbjct: 284 KKGRVE 289
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 167/393 (42%), Gaps = 28/393 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTV---IHGLCKDGLVNKAQKLC 58
Y +++S L K + A + E+ P+LV T+ I C V KA
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFS---PSLVNSQTLLIMIRKYCAVHDVGKAINTF 220
Query: 59 SEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL----NENSLDVCSFNIIMDALCKQ- 113
+ + + F SL+ C + L+ ++ D SFNI+++ C
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 114 GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
G EA V EM GV+ DV+SY+ ++ Y ++K KLFD M + + PD Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 174 NILIQGYCKIERVDEAMNLCEDM-LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
N ++ K V EA NL + M K + PN VTY L LC+ + +A M
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 233 YRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP------EPNVQSYNILISGYCKNG 286
+G P + Y+ + L ++F L EP V++Y +LI C+
Sbjct: 401 EKGLFPT-IRTYHAFMRI-----LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD--LCPFKILMD 344
D + ++ M + + D ++ ++I+ + ++A YK +D + P + + D
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVED 514
Query: 345 GLRK--NGMEEVAQRVSQLYGACDPDVALVRNQ 375
++ +G + QR++ G + + +++
Sbjct: 515 MIQSWFSGKQYAEQRITDSKGEVNKGAIVKKSE 547
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 33/204 (16%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y ++ L K+ A ++ +E + ++PN+V YN++I LCK +A+++ E
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
M+++G+FP + T+ + + R+L E
Sbjct: 399 MLEKGLFPTIRTYHAFM------------RILRTGE---------------------EVF 425
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+ +M K G +P V +Y +L+ C D L+D M E + PD+ SY ++I G
Sbjct: 426 ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Query: 181 CKIERVDEAMNLCEDMLTKNLVPN 204
+++EA ++M K + PN
Sbjct: 486 FLNGKIEEAYGYYKEMKDKGMRPN 509
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 145/339 (42%), Gaps = 40/339 (11%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV---- 89
N+ N + LCK+ LV +A K ++ I PD +T+ ++I GFC E
Sbjct: 180 NVETMNRGVETLCKEKLVEEA-KFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 90 RLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMI-KRGVQPDVISYTILMDGYCL 147
L+++E +D+ + IM+ L K+ EA V Y M+ KRG D Y +++D C
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++D ARK+FD M E G+ D ++ LI G RV EA L E + P+
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISI 354
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET---LCEQHLDKANKIFN 264
Y L GL + R +A +M RG P I+ T L + HL + +
Sbjct: 355 YHGLIKGLVKIKRASEATEVFRKMIQRGCEP--------IMHTYLMLLQGHLGRRGR--- 403
Query: 265 SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
P+P V I + G K G+ E + R + R E R
Sbjct: 404 -KGPDPLVNFDTIFVGGMIKAGKRLETTKYIE----RTLKRGLE---------VPRFDYS 449
Query: 325 KAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYG 363
K + Y N + F+ + LR+ + ++A + Q YG
Sbjct: 450 KFLHYYSNEEGVVMFEEMAKKLREVSLFDLAD-IFQRYG 487
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVI----HGLCKDGLVNKAQK 56
+Y L+S + K + A+ E++ +P+ +YN +I H K + K +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKN-SGCRPDASVYNALITAHLHTRDKAKALEKVRG 193
Query: 57 LCSEMIQRGIF---PDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMD 108
+M +GI P+VVT++ L+ F + + +V L + S DV +FN +MD
Sbjct: 194 YLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 109 ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
A K G++ E AV M +PD+I++ +L+D Y K + +K + F ++ + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+ ++N +I Y K +D+A + + M N +P+ +TY+ +
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECM----------------- 354
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNV---QSYNILISGYCKN 285
I++ C + +A +IF + V + N ++ YC+N
Sbjct: 355 -----------------IMMYGYC-GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
G EA ++ N + D+ T+K L A+ K
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC--- 216
M + +PD Y+ LI K + AM L +M P+A Y L
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 217 -RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSL--IP-EPN 271
+ L +L +M P++ YNI+L + +D+ N +F L P P+
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
V ++N ++ Y KNG + E ++ M D TF +LI+++ K+++ +K +K
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 332 N 332
+
Sbjct: 303 S 303
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVI----HGLCKDGLVNKAQK 56
+Y L+S + K + A+ E++ +P+ +YN +I H K + K +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKN-SGCRPDASVYNALITAHLHTRDKAKALEKVRG 193
Query: 57 LCSEMIQRGIF---PDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSLDVCSFNIIMD 108
+M +GI P+VVT++ L+ F + + +V L + S DV +FN +MD
Sbjct: 194 YLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 109 ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
A K G++ E AV M +PD+I++ +L+D Y K + +K + F ++ + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+ ++N +I Y K +D+A + + M N +P+ +TY+ +
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECM----------------- 354
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNV---QSYNILISGYCKN 285
I++ C + +A +IF + V + N ++ YC+N
Sbjct: 355 -----------------IMMYGYC-GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
G EA ++ N + D+ T+K L A+ K
Sbjct: 397 GLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC--- 216
M + +PD Y+ LI K + AM L +M P+A Y L
Sbjct: 123 MQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTR 182
Query: 217 -RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSL--IP-EPN 271
+ L +L +M P++ YNI+L + +D+ N +F L P P+
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
V ++N ++ Y KNG + E ++ M D TF +LI+++ K+++ +K +K
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 332 N 332
+
Sbjct: 303 S 303
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ--PDVISYTILMDGYC---------- 146
DV ++N I++ALC+ G +A + +M G + PD +YTIL+ YC
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRK 258
Query: 147 -LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
++ ++ +A ++F M+ G VPDV +YN LI G CK R+ A+ L EDM TK VPN
Sbjct: 259 AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE 253
VTY + A + M GH P + Y ++ L E
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVE 366
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 17/240 (7%)
Query: 94 NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
+N + S +M L ++G + EA A Y M + +PDV +Y +++ C K
Sbjct: 159 GKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKK 218
Query: 154 ARKLFDMMIEAGL--VPDVWSYNILIQGYCKI-----------ERVDEAMNLCEDMLTKN 200
AR L D M G PD ++Y ILI YC+ R+ EA + +ML +
Sbjct: 219 ARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRG 278
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKAN 260
VP+ VTY L DG C+ R+ A M +G P +T + I ++ A
Sbjct: 279 FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAI 338
Query: 261 KIFNSLIP----EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++ ++ P +Y LI + R EA + M +V T+KL+ +A
Sbjct: 339 EMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIF--PDVVTFSSLIYGFCH------- 82
KP++ YNT+I+ LC+ G KA+ L +M G PD T++ LI +C
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 83 -----ADQWKEVRL----LLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQP 133
W+ R+ L DV ++N ++D CK + A + +M +G P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGL-VPDVWSYNILIQGYCKIERVDEAMNL 192
+ ++Y + Y + +++ A ++ M + G VP +Y LI + R EA +L
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFG 219
+M+ LVP TYK + D L G
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR-PPDLTPY 244
V EA+ M + P+ Y + + LCR G A L +M G R PPD Y
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 245 NIILETLCE------------QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVD 289
I++ + C + + +AN++F ++ P+V +YN LI G CK R+
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDL 336
A+ ++++M + V + T+ I + + + AI + + + L
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKL 347
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 24/318 (7%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
P++ YN V+ + + + A L EM QR + PD T+S+LI F +
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 93 LNENSLDVCSFNIIMDA--------LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
L + D S ++++ + LC +A ++ + + G+ PD+++Y +++
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYS---KAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 145 YCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPN 204
Y +AR L M EAG++P+ SY+ L+ Y + + EA+++ +M N +
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 205 AVTYKYLFDGLCRFGRLPDA----WNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKA 259
T + D + + +A W+ L +M P++ YN IL E L +A
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWS-LRKMDIE----PNVVSYNTILRVYGEAELFGEA 384
Query: 260 NKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+F + E NV +YN +I Y K ++A ++ Q M R I ++ T+ +I+
Sbjct: 385 IHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISI 444
Query: 317 FCKRKQCDKAIALYKNNR 334
+ K + D+A L++ R
Sbjct: 445 WGKAGKLDRAATLFQKLR 462
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 153/328 (46%), Gaps = 13/328 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ + ++K A E+ L P+ Y+T+I K+G+ + A +M
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALA-PDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 62 IQRGIFPDVVTFSSLI---YGFCHADQWKEV--RLLLNENSLDVCSFNIIMDALCKQGLL 116
Q + D+V +S+LI C + + RL + + D+ ++N +++ K L
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA + EM + GV P+ +SY+ L+ Y K +A +F M E D+ + NI+
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I Y +++ V EA L + ++ PN V+Y + +A + L R+ R
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH-LFRLMQRKD 395
Query: 237 RPPDLTPYNIILETLCE--QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEA 291
++ YN +++ + +H +KA + + EPN +Y+ +IS + K G++D A
Sbjct: 396 IEQNVVTYNTMIKIYGKTMEH-EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
Query: 292 MSIYQNMCLRNIVRDSETFKLLINAFCK 319
+++Q + + D ++ +I A+ +
Sbjct: 455 ATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 150/345 (43%), Gaps = 49/345 (14%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI------YGFCHA- 83
+ P+LV YN++I+ K L +A+ L EM + G+ P+ V++S+L+ + F A
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 84 ---DQWKEV--------------------------RLLLNENSLD----VCSFNIIMDAL 110
+ KEV RL + +D V S+N I+
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
+ L EA + M ++ ++ +V++Y ++ Y + +KA L M G+ P+
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
+Y+ +I + K ++D A L + + + + + V Y+ + R G + A L
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE 495
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNI---LISGYCKNG 286
+ + PD P + L + ++A +F V+ ++ +I+ Y +N
Sbjct: 496 L-----KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 550
Query: 287 RVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
R + +++ M DS +++NA+ K+++ +KA +Y+
Sbjct: 551 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYR 595
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
P V +Y +++ + D A LFD M + L PD ++Y+ LI + K D A++
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
+ M + + V Y L + R A + +R+ R PDL YN ++
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK-RSGITPDLVAYNSMINVYG 271
Query: 253 EQHLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
+ L + ++ + E PN SY+ L+S Y +N + EA+S++ M N D
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 309 TFKLLINAFCKRKQCDKAIALYKNNRDL 336
T ++I+ + + +A L+ + R +
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKM 359
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 149/342 (43%), Gaps = 12/342 (3%)
Query: 1 MYGTLMSGLCKSKG-SGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+Y + GL K KG + AI Q ++ KP YN +I+ K + KL
Sbjct: 230 VYNAYIEGLMKRKGNTEEAIDVFQRMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALCKQG 114
EM P++ T+++L+ F ++ +E+ L E+ L DV +N +M++ + G
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
A + M G +PD SY I++D Y A +F+ M G+ P + S+
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+L+ Y K V + + ++M + P+ + + R G+ L M
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME-N 467
Query: 235 GHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
G D++ YNI++ + L++ ++F L + P+V ++ I Y + +
Sbjct: 468 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 527
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+ +++ M D T K+L++A +Q ++ ++ +
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 569
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHAD---QWKE 88
KPN+ Y +++ ++GL KA+++ ++ + G+ PDV +++L+ + A E
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 89 VRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ L+ D S+NI++DA + GL +A AV EM + G+ P + S+ +L+ Y
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
V K + M E G+ PD + N ++ Y ++ + + + +M +
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
TY L + + G L + + RP +T + I ++ K ++F +
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNM 298
I P+ + +L+S +V++ S+ + M
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 15/289 (5%)
Query: 57 LCSEMIQRGIF-PDVVTFSSLIYGFCHADQWKE-----VRLLLNENSLDVCSFNIIMDAL 110
+C ++++ F PDV+ F+ LI + Q+KE V+LL + ++ +++ A
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTI---LMDGYC-LKCKVDKARKLFDMMIEAGL 166
C GL+ A V EM V P I T+ ++G K ++A +F M
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
P +YN++I Y K + + L +M + PN TY L + R G A
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP----EPNVQSYNILISGY 282
++ G PD+ YN ++E+ SL+ EP+ SYNI++ Y
Sbjct: 321 IFEQLQEDGLE-PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ G +A ++++ M I ++ LL++A+ K + K A+ K
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 138/350 (39%), Gaps = 47/350 (13%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD---VVTFSSLIYGFC-HADQWKE 88
P Y +I C GL+ +A+ + EM + P V +++ I G +E
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 89 VRLLLNENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
+ D C ++N++++ K + + EM +P++ +YT L++
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
+ + +KA ++F+ + E GL PDV+ YN L++ Y + A + M P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP---------------DLTPYNIIL 248
+ +Y + D R G DA M G P D+T I+
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 249 ETLCEQHLDKANKIFNSLIP-----------------------EPNVQSYNILISGYCKN 285
+ + E ++ + NS++ ++ +YNILI+ Y K
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 487
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
G ++ ++ + +N D T+ I A+ ++K K + +++ D
Sbjct: 488 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMID 537
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
DV FN+++DA ++ EA ++ ++++ P +Y +L+ YC+ +++A +
Sbjct: 154 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 213
Query: 159 DMMIEAGLVPD---VWSYNILIQGYCKIE-RVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
M + P V YN I+G K + +EA+++ + M P TY + +
Sbjct: 214 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 273
Query: 215 LCRFGRLPDAWNFLTRMHYRGHR-PPDLTPYNIILETLCEQHL-DKANKIFNSLIP---E 269
+ + +W M R H+ P++ Y ++ + L +KA +IF L E
Sbjct: 274 YGKASKSYMSWKLYCEM--RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P+V YN L+ Y + G A I+ M D ++ ++++A+ + A A+
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 330 YKNNRDL 336
++ + L
Sbjct: 392 FEEMKRL 398
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 54/260 (20%)
Query: 128 KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVD 187
K QPDVI + +L+D Y K + +A L+ ++E+ VP +Y +LI+ YC ++
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 188 EAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
A + +M ++ P + +T YN
Sbjct: 208 RAEVVLVEMQNHHVSPKTI---------------------------------GVTVYNAY 234
Query: 248 LETLCEQ--HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNM---- 298
+E L ++ + ++A +F + + P ++YN++I+ Y K + + +Y M
Sbjct: 235 IEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ 294
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGME 352
C NI T+ L+NAF + C+KA +++ D+ + LM+ + G
Sbjct: 295 CKPNIC----TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 353 EVAQRVSQL--YGACDPDVA 370
A + L + C+PD A
Sbjct: 351 YGAAEIFSLMQHMGCEPDRA 370
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 149/342 (43%), Gaps = 12/342 (3%)
Query: 1 MYGTLMSGLCKSKG-SGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+Y + GL K KG + AI Q ++ KP YN +I+ K + KL
Sbjct: 252 VYNAYIEGLMKRKGNTEEAIDVFQRMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYC 310
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALCKQG 114
EM P++ T+++L+ F ++ +E+ L E+ L DV +N +M++ + G
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
A + M G +PD SY I++D Y A +F+ M G+ P + S+
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+L+ Y K V + + ++M + P+ + + R G+ L M
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME-N 489
Query: 235 GHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDE 290
G D++ YNI++ + L++ ++F L + P+V ++ I Y + +
Sbjct: 490 GPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+ +++ M D T K+L++A +Q ++ ++ +
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 591
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHAD---QWKE 88
KPN+ Y +++ ++GL KA+++ ++ + G+ PDV +++L+ + A E
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 89 VRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ L+ D S+NI++DA + GL +A AV EM + G+ P + S+ +L+ Y
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
V K + M E G+ PD + N ++ Y ++ + + + +M +
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
TY L + + G L + + RP +T + I ++ K ++F +
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 267 IPE---PNVQSYNILISGYCKNGRVDEAMSIYQNM 298
I P+ + +L+S +V++ S+ + M
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 15/289 (5%)
Query: 57 LCSEMIQRGIF-PDVVTFSSLIYGFCHADQWKE-----VRLLLNENSLDVCSFNIIMDAL 110
+C ++++ F PDV+ F+ LI + Q+KE V+LL + ++ +++ A
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTI---LMDGYC-LKCKVDKARKLFDMMIEAGL 166
C GL+ A V EM V P I T+ ++G K ++A +F M
Sbjct: 223 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 167 VPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN 226
P +YN++I Y K + + L +M + PN TY L + R G A
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 227 FLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP----EPNVQSYNILISGY 282
++ G PD+ YN ++E+ SL+ EP+ SYNI++ Y
Sbjct: 343 IFEQLQEDGLE-PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ G +A ++++ M I ++ LL++A+ K + K A+ K
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 450
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 138/350 (39%), Gaps = 47/350 (13%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD---VVTFSSLIYGFC-HADQWKE 88
P Y +I C GL+ +A+ + EM + P V +++ I G +E
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 89 VRLLLNENSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
+ D C ++N++++ K + + EM +P++ +YT L++
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
+ + +KA ++F+ + E GL PDV+ YN L++ Y + A + M P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP---------------DLTPYNIIL 248
+ +Y + D R G DA M G P D+T I+
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
Query: 249 ETLCEQHLDKANKIFNSLIP-----------------------EPNVQSYNILISGYCKN 285
+ + E ++ + NS++ ++ +YNILI+ Y K
Sbjct: 450 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 509
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
G ++ ++ + +N D T+ I A+ ++K K + +++ D
Sbjct: 510 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMID 559
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
DV FN+++DA ++ EA ++ ++++ P +Y +L+ YC+ +++A +
Sbjct: 176 DVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVL 235
Query: 159 DMMIEAGLVPD---VWSYNILIQGYCKIE-RVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
M + P V YN I+G K + +EA+++ + M P TY + +
Sbjct: 236 VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINL 295
Query: 215 LCRFGRLPDAWNFLTRMHYRGHR-PPDLTPYNIILETLCEQHL-DKANKIFNSLIP---E 269
+ + +W M R H+ P++ Y ++ + L +KA +IF L E
Sbjct: 296 YGKASKSYMSWKLYCEM--RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P+V YN L+ Y + G A I+ M D ++ ++++A+ + A A+
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 330 YKNNRDL 336
++ + L
Sbjct: 414 FEEMKRL 420
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 54/260 (20%)
Query: 128 KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVD 187
K QPDVI + +L+D Y K + +A L+ ++E+ VP +Y +LI+ YC ++
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 188 EAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
A + +M ++ P + +T YN
Sbjct: 230 RAEVVLVEMQNHHVSPKTI---------------------------------GVTVYNAY 256
Query: 248 LETLCEQ--HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNM---- 298
+E L ++ + ++A +F + + P ++YN++I+ Y K + + +Y M
Sbjct: 257 IEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ 316
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGME 352
C NI T+ L+NAF + C+KA +++ D+ + LM+ + G
Sbjct: 317 CKPNIC----TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 353 EVAQRVSQL--YGACDPDVA 370
A + L + C+PD A
Sbjct: 373 YGAAEIFSLMQHMGCEPDRA 392
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 136/302 (45%), Gaps = 41/302 (13%)
Query: 41 VIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE----- 95
+I K G+ AQK+ EM R V++F++L+ + + ++ V L NE
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 96 -NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
D+ S+N ++ ALC++ L EA A+ E+ +G++PD++++ L+ LK + +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
+++ M+E + D+ +YN + G + E +NL ++ L P+ ++ + G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQS 274
G++ +A + + G+RP DKA +
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRP------------------DKA--------------T 322
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF---CKRKQCDKAIALYK 331
+ +L+ CK G + A+ +++ + + T + L++ KR++ ++ + + K
Sbjct: 323 FALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAK 382
Query: 332 NN 333
N
Sbjct: 383 TN 384
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 12/272 (4%)
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI-EA 164
I+ K G+ A V EM R + V+S+ L+ Y L K D +LF+ + +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 165 GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
+ PD+ SYN LI+ C+ + + EA+ L +++ K L P+ VT+ L G+
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 225 WNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA-NKIFNSLIP---EPNVQSYNILIS 280
+M + + D+ YN L L + K +F L +P+V S+N +I
Sbjct: 235 EEIWAKMVEK-NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK---NNRDL- 336
G G++DEA + Y+ + D TF LL+ A CK + AI L+K + R L
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 337 --CPFKILMDGLRKNGMEEVAQRVSQLYGACD 366
+ L+D L K E A+ + ++ D
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIVKIAKTND 385
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 113/228 (49%), Gaps = 5/228 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ L+S SK + EL +KP++V YNT+I LC+ + +A L E+
Sbjct: 147 FNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEI 206
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQW---KEV--RLLLNENSLDVCSFNIIMDALCKQGLL 116
+G+ PD+VTF++L+ Q+ +E+ +++ ++D+ ++N + L +
Sbjct: 207 ENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKS 266
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
E + E+ G++PDV S+ ++ G + K+D+A + +++ G PD ++ +L
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
+ CK + A+ L ++ +K + T + L D L + + +A
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 165/412 (40%), Gaps = 83/412 (20%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQE-LEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+Y +L+ L + + +A L+E Q + P+ + N ++ GL DG + AQKL
Sbjct: 119 VYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPD--VCNRLLAGLTSDGCYDYAQKLFV 176
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE------------------NSL--- 98
+M +G+ + + F I FC + + ++ L++E +SL
Sbjct: 177 KMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKC 236
Query: 99 --------------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQP----- 133
D ++ +I +A G L E V + K GV P
Sbjct: 237 SREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDY 296
Query: 134 -----DVISYTILMD------------------------GYCLKCKVDKARKLFDMMIEA 164
D+IS L + G D A + M+
Sbjct: 297 RAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVST 356
Query: 165 GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
G +P + + + L + C+ ++ D + E + +K +Y + LC+ GR+ ++
Sbjct: 357 GKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRES 416
Query: 225 WNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK-ANKIFNSLIPEP---NVQSYNILIS 280
+ L M G PD++ YN ++E C+ + + A K+++ + E N+ +YN+LI
Sbjct: 417 YTALQEMKKEG-LAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIR 475
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+ G +E++ ++ M R I D + LI CK + + A+ +++
Sbjct: 476 KLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 5/182 (2%)
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQW----KEVRLLLNENSL-DVCSFNIIMDALCKQGL 115
M+ G P + T S L C D+ K LL ++ ++ S+++++ LCK G
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNI 175
+ E++ EM K G+ PDV Y L++ C + A+KL+D M G ++ +YN+
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 176 LIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
LI+ + +E++ L + ML + + P+ Y L +GLC+ ++ A + R
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Query: 236 HR 237
H+
Sbjct: 533 HK 534
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
++ LCK +A L+EL + KP+ + Y + G + + Q + + +
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNID-CKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVR-----LLLNENSLDVCSFNIIMDALCKQGLLLEA 119
G+ P + + I A + E + ++ + +D N I+DAL ++
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMD----NDILDALIGSVSAVDP 343
Query: 120 HAVC---YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ M+ G P + + + L C K D K ++++ G ++ SY+++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I CK RV E+ ++M + L P+ Y L + C+ + A M G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 237 RPPDLTPYNIILETLCEQ-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAM 292
+ +LT YN+++ L E+ +++ ++F+ ++ EP+ Y LI G CK +++ AM
Sbjct: 464 KM-NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Query: 293 SIYQNMCLRNIVRDSET 309
+++ C+ RD +T
Sbjct: 523 EVFRK-CME---RDHKT 535
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP-DVVTFSSLIYGFCHADQWKEV 89
V P Y I L + +A+++ +E+I G FP D +LI D V
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPMDNDILDALIGSVSAVDPDSAV 347
Query: 90 RLLLNENSLD----VCSFNIIMDALC---KQGLLLEAHAVCYEMIK-RGVQPDVISYTIL 141
L+ S + + + + LC K L++A YE++ +G ++ SY+++
Sbjct: 348 EFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKA----YELLSSKGYFSELQSYSLM 403
Query: 142 MDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL 201
+ C +V ++ M + GL PDV YN LI+ CK E + A L ++M +
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKAN 260
N TY L L G ++ +M RG PD T Y ++E LC E ++ A
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIE-PDETIYMSLIEGLCKETKIEAAM 522
Query: 261 KIFNSLIPEPNVQSYNILISGY----CKNGRVDEA 291
++F + + ++S + C NG EA
Sbjct: 523 EVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEA 557
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 158/338 (46%), Gaps = 55/338 (16%)
Query: 26 EALQLVKP----NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC 81
EAL++ K + V YN +I G ++G A+KL EM +R D+V+++ +I G+
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYV 137
Query: 82 HADQWKEVRLLLN-ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG---------- 130
+ R L DVCS+N ++ + G + +A +V M ++
Sbjct: 138 RNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA 197
Query: 131 -VQPD----------------VISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
VQ ++S+ L+ G+ K K+ +AR+ FD M V DV S+
Sbjct: 198 YVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN----VRDVVSW 253
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
N +I GY + ++DEA L ++ + V + T+ + G + + +A +M
Sbjct: 254 NTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 234 RGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAM 292
R +N +L + + ++ A ++F+ ++P NV ++N +I+GY + G++ EA
Sbjct: 310 RNE-----VSWNAMLAGYVQGERMEMAKELFD-VMPCRNVSTWNTMITGYAQCGKISEAK 363
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+++ M R+ V ++ +I + + +A+ L+
Sbjct: 364 NLFDKMPKRDPV----SWAAMIAGYSQSGHSFEALRLF 397
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 155/323 (47%), Gaps = 30/323 (9%)
Query: 19 IQTLQELEALQLVKPN----LVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFS 74
+Q + EA L K LV +N ++ G K + +A++ M R DVV+++
Sbjct: 199 VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWN 254
Query: 75 SLIYGFCHADQWKEVRLLLNENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQP 133
++I G+ + + E R L +E+ + DV ++ ++ + ++ EA + +M +R
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---- 310
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLC 193
+ +S+ ++ GY +++ A++LFD+M +V ++N +I GY + ++ EA NL
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 194 EDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE 253
+ M ++ V++ + G + G +A +M G R + + ++ L T +
Sbjct: 367 DKMPKRD----PVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL-NRSSFSSALSTCAD 421
Query: 254 Q-HLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSET 309
L+ ++ L+ E N L+ YCK G ++EA +++ M ++IV +
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV----S 477
Query: 310 FKLLINAFCKRKQCDKAIALYKN 332
+ +I + + + A+ +++
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFES 500
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 25/292 (8%)
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKR 129
F SL Q + + LL D+ +N+ + + + G EA V KR
Sbjct: 34 AANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRV----FKR 89
Query: 130 GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
+ +SY ++ GY + + ARKLFD M E LV S+N++I+GY + + +A
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKA 145
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILE 249
L E M +++ ++ + G + G + DA + RM + +N +L
Sbjct: 146 RELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEKND-----VSWNALLS 196
Query: 250 TLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSE 308
+ +++A +F S V S+N L+ G+ K ++ EA + +M +R++V
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALV-SWNCLLGGFVKKKKIVEARQFFDSMNVRDVV---- 251
Query: 309 TFKLLINAFCKRKQCDKAIALYKNN--RDLCPFKILMDGLRKNGMEEVAQRV 358
++ +I + + + D+A L+ + +D+ + ++ G +N M E A+ +
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
++ + N V +N ++ G + + A++L M R +V T++++I G+ + E
Sbjct: 306 KMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISE 361
Query: 89 VRLLLNE-NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ L ++ D S+ ++ + G EA + +M + G + + S++ +
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
++ ++L +++ G + N L+ YCK ++EA +L ++M K++ V+
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI----VS 477
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
+ + G R G A F M G +P D T ++ +DK + F ++
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 268 PE----PNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+ PN Q Y ++ + G +++A ++ +NM
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 151/344 (43%), Gaps = 26/344 (7%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ----WK 87
+P + NTV+ + +L + Q GI P+++T++ + + + +
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALE 186
Query: 88 EVRLLLNENSLD--VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
+L ++ L+ + +F I++ L L +A + +M +G D + Y+ LM G
Sbjct: 187 HYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGC 246
Query: 146 CLKCKVDKARKLFDMMIE--AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN--L 201
D KL+ + E G V D Y L++GY E EAM E+ + +N +
Sbjct: 247 VKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKV 306
Query: 202 VPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP-----DLTPYNIILETLCEQ-H 255
+A+ Y Y+ + L G+ +A + + H PP +L +N+++ C
Sbjct: 307 RMSAMAYNYVLEALSENGKFDEALKLFDAVK-KEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 256 LDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKL 312
++A ++F + P+ S+N L++ C N + EA +Y M +N+ D T+ L
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 313 LINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNG 350
L++ K + D+ A YK +L + L D L K G
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 134/315 (42%), Gaps = 43/315 (13%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQE-LEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCS 59
+YG LM G + A++ +E + V+ + + YN V+ L ++G ++A KL
Sbjct: 275 VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFD 334
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEA 119
+ + P R L ++++ +FN++++ C G EA
Sbjct: 335 AVKKEHNPP---------------------RHL----AVNLGTFNVMVNGYCAGGKFEEA 369
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
V +M PD +S+ LM+ C + +A KL+ M E + PD ++Y +L+
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
K ++DE + M+ NL PN Y L D L + G+L DA +F M +
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM-- 487
Query: 240 DLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
D Y I+ L E LD+ KI + ++ + V RV E + +
Sbjct: 488 DDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV--------------RVSEELQEFVKE 533
Query: 299 CLRNIVRDSETFKLL 313
LR R+ + KL+
Sbjct: 534 ELRKGGREGDLEKLM 548
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 49 GLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE------NSLDVCS 102
G+ AQK+ EM +R ++F++L+ ++ ++ V + E DV S
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
+N ++ LC +G EA A+ E+ +G++PD I++ IL+ K K ++ +++ M+
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
E + D+ SYN + G + +E ++L + + L P+ T+ + G G+L
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGY 282
+A + + G RP +FNSL+P
Sbjct: 300 EAITWYKEIEKNGCRPLKF--------------------VFNSLLP------------AI 327
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA---IALYKNN 333
CK G ++ A + + + + ++ D + +++A K + D+A + L K N
Sbjct: 328 CKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTN 381
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 22 LQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC 81
+EL ++P++ YNT+I GLC G +A L E+ +G+ PD +TF+ L++
Sbjct: 164 FKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESY 223
Query: 82 HADQWKE-----VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVI 136
+++E R++ D+ S+N + L + E ++ ++ ++PDV
Sbjct: 224 TKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVF 283
Query: 137 SYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM 196
++T ++ G+ + K+D+A + + + G P + +N L+ CK ++ A LC+++
Sbjct: 284 TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Query: 197 LTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
K L+ + + + D L + + +A
Sbjct: 344 FAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPNAVTYKY 210
+ A+K+FD M E S+N L+ ++ D + +++ K ++ P+ +Y
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL-ETLCEQHLDKANKIFNSLIPE 269
L GLC G +A + + +G +P +T +NI+L E+ + ++ +I+ ++ +
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHIT-FNILLHESYTKGKFEEGEQIWARMVEK 241
Query: 270 ---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
+++SYN + G + +E +S++ + + D TF +I F + D+A
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 327 IALYKN-NRDLC-PFKILMDGL 346
I YK ++ C P K + + L
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSL 323
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 14/334 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+G ++ C++ A Q + L + ++ +++ ++ G + G KA L ++M
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVG-LMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 273
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
IQ G P++VT++SLI GF E +L++ + D+ N+++ + G
Sbjct: 274 IQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRF 333
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V + KR + PD ++ ++ CL K D ++ + G D+ + N+L
Sbjct: 334 EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLL 390
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+ KI A+ + M K+ + TY LCR G P A + ++ +
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR-GGAPRAAIKMYKIIIKEK 449
Query: 237 RPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAM 292
+ D ++ I+++L E + A +F I E +V SY + I G + R++EA
Sbjct: 450 KHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAY 509
Query: 293 SIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
S+ +M I + T++ +I+ CK K+ +K
Sbjct: 510 SLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI 162
F I+ C+ G + EA V MI G+ V +++L+ G+ + KA LF+ MI
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
+ G P++ +Y LI+G+ + VDEA + + ++ L P+ V + R GR
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPEPNVQSYNILISG 281
+A T + R PD + IL +LC D +I + + + ++ + N+L +
Sbjct: 335 EARKVFTSLEKR-KLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNC 393
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ K G A+ + M ++ D T+ + ++A C+ AI +YK
Sbjct: 394 FSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 154/372 (41%), Gaps = 52/372 (13%)
Query: 6 MSGLCKSKGSGNAIQTLQELEAL--QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
+S C G G+ + L+ + + PN + ++ C+ G V++A ++ MI
Sbjct: 181 LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC 240
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVC 123
GI V +S L+ GF + + ++ L N+
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNK---------------------------- 272
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
MI+ G P++++YT L+ G+ VD+A + + GL PD+ N++I Y ++
Sbjct: 273 --MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
R +EA + + + LVP+ T+ + LC G+ ++ + R+ + DL
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK----FDLVPRITHGIGTDFDLVT 386
Query: 244 YNIILETLCE----QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMC 299
N++ + + K I + + +Y + +S C+ G A+ +Y+ +
Sbjct: 387 GNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIII 446
Query: 300 LRNIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEE 353
D+ +I++ + + + A+ L+K D+ + + + GL +
Sbjct: 447 KEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR----- 501
Query: 354 VAQRVSQLYGAC 365
A+R+ + Y C
Sbjct: 502 -AKRIEEAYSLC 512
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLL 92
Y + LC+ G A K+ +I+ D S++I ++ R +
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 93 LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
L + LDV S+ + + L + + EA+++C +M + G+ P+ +Y ++ G C + + +
Sbjct: 482 LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETE 541
Query: 153 KARKLFDMMIEAGLVPD 169
K RK+ I+ G+ D
Sbjct: 542 KVRKILRECIQEGVELD 558
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 76/267 (28%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +L+ G A L ++++ L P++V+ N +IH + G +A+K+ + +
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSKVQSEGLA-PDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV----------------RLLLN----------- 94
+R + PD TF+S++ C + ++ V LL N
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYA 403
Query: 95 ----------ENSLDVCSFNIIMDALCKQGL----------------LLEAH---AVCYE 125
+ +LD ++ + + ALC+ G L+AH A+
Sbjct: 404 LKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS 463
Query: 126 MIKRG----------------VQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD 169
+I+ G DV+SYT+ + G ++++A L M E G+ P+
Sbjct: 464 LIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPN 523
Query: 170 VWSYNILIQGYCK---IERVDEAMNLC 193
+Y +I G CK E+V + + C
Sbjct: 524 RRTYRTIISGLCKEKETEKVRKILREC 550
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 10/175 (5%)
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLC 216
+F +M E+ + D YNI+I G CK + DEA N+ ++L L P+ TY +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 217 RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYN 276
RF L A M RG PD YN ++ LC+Q NK+ + + ++N
Sbjct: 57 RFSSLGRAEKLYAEMIRRG-LVPDTITYNSMIHGLCKQ-----NKLAQARKVSKSCSTFN 110
Query: 277 ILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
LI+GYCK RV + M+++ M R IV + T+ LI+ F + + A+ +++
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 43/222 (19%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
YN +IHGLCK G ++A + + ++ G+ P
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQP----------------------------- 47
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
DV ++N+++ + L A + EMI+RG+ PD I+Y ++ G C + K+ +ARK+
Sbjct: 48 -DVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV 102
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
++N LI GYCK RV + MNL +M + +V N +TY L G +
Sbjct: 103 ---------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQ 153
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKA 259
G A + M G +T +I+ + + L KA
Sbjct: 154 VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 134 DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLC 193
D Y I++ G C K D+A +F ++ +GL PDV +YN++I + + A L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 194 EDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE 253
+M+ + LVP+ +TY + GLC+ +L A + +N ++ C+
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV----------SKSCSTFNTLINGYCK 118
Query: 254 -QHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSET 309
+ +F + NV +Y LI G+ + G + A+ I+Q M + S T
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 310 FKLLINAFCKRKQCDKAIAL 329
F+ ++ C RK+ KA+A+
Sbjct: 179 FRDILPQLCSRKELRKAVAM 198
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 40/153 (26%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y +++ GLCK +L + V + +NT+I+G CK V L EM
Sbjct: 83 YNSMIHGLCKQ----------NKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+RGI +V+T+++LI+GF V FN +D
Sbjct: 133 YRRGIVANVITYTTLIHGF-----------------RQVGDFNTALD------------- 162
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
+ EM+ GV I++ ++ C + ++ KA
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKA 195
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 24/271 (8%)
Query: 44 GLCKD-----GLVNKAQKLCSEMIQRGIFPDV-----VTFSSLIYGFCHADQWKEVRLLL 93
G C D G+V+ K R F ++ V++++LI G+ + L
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 94 NE--NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
++ + DV +N +MD K G + A + EM + VI++T ++ GYC +
Sbjct: 168 DQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDI 223
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDM-LTKNLVPNAVTYKY 210
D ARKLFD M E LV S+N +I GYC+ ++ E + L ++M T +L P+ VT
Sbjct: 224 DAARKLFDAMPERNLV----SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 211 LFDGLCRFGRLP-DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE 269
+ + G L W + + + + + + C + ++KA +IF+ + PE
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE-IEKAKRIFDEM-PE 337
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCL 300
V S+N +I GY NG A+ ++ M +
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 142/339 (41%), Gaps = 72/339 (21%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y +M G KS +A + E+ ++ + T+IHG C ++ A+KL
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEM-----THKTVITWTTMIHGYCNIKDIDAARKLFDA 232
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE----NSLDVCSFNI--IMDALCKQG 114
M +R ++V+++++I G+C Q +E L E SLD I ++ A+ G
Sbjct: 233 MPER----NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 115 LL-LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
L L C+ + ++ + V T ++D Y +++KA+++FD M E V S+
Sbjct: 289 ALSLGEWCHCF-VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE----KQVASW 343
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT-------------------------- 207
N +I GY A++L M+ + P+ +T
Sbjct: 344 NAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE 402
Query: 208 ---------YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL---CEQH 255
Y + D L R G L +A + +T M + P IIL + C Q+
Sbjct: 403 MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFE--------PNGIILSSFLSACGQY 454
Query: 256 LD--KANKIFNSLIP-EP-NVQSYNILISGYCKNGRVDE 290
D +A +I + EP N +Y +L + Y + R D+
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDD 493
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
PD ++T L L V + +L + G D++ ++ Y K ++ A N
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC 252
++M ++ V++ L G R G L A +M + D+ YN +++
Sbjct: 136 FDEMPHRS----EVSWTALISGYIRCGELDLASKLFDQMPH----VKDVVIYNAMMDGFV 187
Query: 253 EQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFK 311
+ + A ++F+ + V ++ +I GYC +D A ++ M RN+V ++
Sbjct: 188 KSGDMTSARRLFDEMT-HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SWN 242
Query: 312 LLINAFCKRKQCDKAIALYK 331
+I +C+ KQ + I L++
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQ 262
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 73/130 (56%)
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
++D LCK GL+ EA + M +G P+V+ YT +++ +C K++ A+++F M G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
+ P+ +SY +L+QG +D+A+ C +ML PN T+ L D LCR + A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 226 NFLTRMHYRG 235
+ + ++ +G
Sbjct: 257 SAIDTLNQKG 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN V ++ GLCKDGLV +A KL M +G P+VV +++++ FC A + ++ + +
Sbjct: 132 PNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 93 L-----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
N + + S+ +++ L +L +A A C EM++ G P+V ++ L+D C
Sbjct: 189 FRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Query: 148 KCKVDKARKLFDMMIEAGLVPDV 170
V++A+ D + + G +V
Sbjct: 249 VKGVEQAQSAIDTLNQKGFAVNV 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
++ + +M + G+ P+ ++ ++DG C V +A KLF +M + G +P+V Y ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+ +CK ++++A + M + PNA +Y L GL L DA F + M GH
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 238 PPDLTPYNIILETLCE-QHLDKANKIFNSL 266
P++ + +++ LC + +++A ++L
Sbjct: 234 -PNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+++ + + M L+PNAV + DGLC+ G + +A M +G P ++ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIP-EVVIYTA 171
Query: 247 ILETLCEQH-LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
++E C+ H ++ A +IF + PN SY +L+ G +D+A++ M
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 303 IVRDSETFKLLINAFCKRKQCDKA 326
+ TF L++A C+ K ++A
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQA 255
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 73/130 (56%)
Query: 106 IMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
++D LCK GL+ EA + M +G P+V+ YT +++ +C K++ A+++F M G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
+ P+ +SY +L+QG +D+A+ C +ML PN T+ L D LCR + A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 226 NFLTRMHYRG 235
+ + ++ +G
Sbjct: 257 SAIDTLNQKG 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN V ++ GLCKDGLV +A KL M +G P+VV +++++ FC A + ++ + +
Sbjct: 132 PNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 93 L-----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
N + + S+ +++ L +L +A A C EM++ G P+V ++ L+D C
Sbjct: 189 FRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Query: 148 KCKVDKARKLFDMMIEAGLVPDV 170
V++A+ D + + G +V
Sbjct: 249 VKGVEQAQSAIDTLNQKGFAVNV 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
++ + +M + G+ P+ ++ ++DG C V +A KLF +M + G +P+V Y ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
+ +CK ++++A + M + PNA +Y L GL L DA F + M GH
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 238 PPDLTPYNIILETLCE-QHLDKANKIFNSL 266
P++ + +++ LC + +++A ++L
Sbjct: 234 -PNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 187 DEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNI 246
+++ + + M L+PNAV + DGLC+ G + +A M +G P ++ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIP-EVVIYTA 171
Query: 247 ILETLCEQH-LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
++E C+ H ++ A +IF + PN SY +L+ G +D+A++ M
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 303 IVRDSETFKLLINAFCKRKQCDKA 326
+ TF L++A C+ K ++A
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQA 255
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
+D SFNI + + C+ G+L A+ EM K G+ PDV++YT L+ + L
Sbjct: 175 IDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGL 234
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
+++M+ G P++ ++N+ IQ R +A +L M + P+++TY + G
Sbjct: 235 WNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF- 293
Query: 218 FGRLPD-AWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPE---PNV 272
R PD A T MH +G++ P+L Y ++ LC+ + D A + + + PN+
Sbjct: 294 LARFPDMAERVYTAMHGKGYK-PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNL 352
Query: 273 QSYNILISGYCKNGRVDEAMSIYQ 296
+ +L+ G K G++D+A SI +
Sbjct: 353 DTVEMLLKGLVKKGQLDQAKSIME 376
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQ-------WKE 88
V +N I C+ G+++ A EM + G+ PDVVT+++LI ++ W
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWN- 236
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
++L ++ +FN+ + L + +A+ + M K V+PD I+Y +++ G+ L
Sbjct: 237 -LMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
D A +++ M G P++ Y +I CK D A +C+D + K PN T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
+ L GL + G+L A + + +H R PP
Sbjct: 356 EMLLKGLVKKGQLDQAKSIMELVHRR--VPP 384
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 6/218 (2%)
Query: 128 KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVD 187
K G+ D +S+ I + +C +D A M ++GL PDV +Y LI K ER
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 188 EAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
L M+ K PN T+ L R DA + L M + PD YN++
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMP-KLQVEPDSITYNMV 288
Query: 248 LET-LCEQHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
++ + D A +++ ++ +PN++ Y +I CK G D A ++ ++ +
Sbjct: 289 IKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
Query: 304 VRDSETFKLLINAFCKRKQCDKAIALYK-NNRDLCPFK 340
+ +T ++L+ K+ Q D+A ++ + +R + PF+
Sbjct: 349 YPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVPPFR 386
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 147/366 (40%), Gaps = 18/366 (4%)
Query: 7 SGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGI 66
+G+ N IQ L+ LE LVK ++ L K N +L E R
Sbjct: 19 TGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFK---ANATNRLVIE--NRFA 73
Query: 67 FPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEM 126
F D V+ + + E + L + + IIM K G+ +A + M
Sbjct: 74 FEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIM-LYGKAGMTKQALDTFFNM 132
Query: 127 IKRGVQPDVISYTILMDGYCLKCKVDKARK-LFDMMIEAGLVPDVWSYNILIQGYCKIER 185
G + V S+ + + + L D + G+ D S+NI I+ +C++
Sbjct: 133 DLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGI 192
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
+D A +M L P+ VTY L L + R M +G + P+LT +N
Sbjct: 193 LDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCK-PNLTTFN 251
Query: 246 IILETLCEQHLDKANKIFNSLIP----EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+ ++ L + L+P EP+ +YN++I G+ D A +Y M +
Sbjct: 252 VRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGK 311
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIALYKN------NRDLCPFKILMDGLRKNGMEEVA 355
+ + ++ +I+ CK D A + K+ +L ++L+ GL K G + A
Sbjct: 312 GYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA 371
Query: 356 QRVSQL 361
+ + +L
Sbjct: 372 KSIMEL 377
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 24/314 (7%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMI--QRGIFPD---VVTFSSLIYGFCHADQWK 87
PNL+ + ++ LCK ++ + ++ IF V F+ L+ FC + K
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193
Query: 88 EVRLLL----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
E R + + + DV + NI++ + G + +EM+KRG +P+ ++Y I +D
Sbjct: 194 EARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRID 253
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
G+C K +A +LF+ M V LI G +A L +++ + L P
Sbjct: 254 GFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTP 313
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL----------CE 253
+ Y L L + G + A + M +G P +T +++ + + CE
Sbjct: 314 DCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCE 373
Query: 254 QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLL 313
+ + SL+P+ + +L+ +C NG V+ + +++ M + +LL
Sbjct: 374 YYQKMKER---SLVPK--TPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELL 428
Query: 314 INAFCKRKQCDKAI 327
A C R++ + A
Sbjct: 429 TTALCARRRANDAF 442
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
KPN V Y I G CK +A +L +M + V ++LI+G A + R
Sbjct: 242 KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQ 301
Query: 92 LLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L +E S D ++N +M +L K G + A V EM ++G++PD +++ + G
Sbjct: 302 LFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG-M 360
Query: 147 LKCK---VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
+K K + + + M E LVP + +L++ +C V+ ++L + ML K P
Sbjct: 361 MKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCP 420
Query: 204 NAVTYKYLFDGLCRFGRLPDAWN 226
+ + L LC R DA+
Sbjct: 421 HGHALELLTTALCARRRANDAFE 443
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE 95
+Y+ + L G ++A+++ M G PD +T+S L++G C A + +E R +L++
Sbjct: 371 AVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 96 NSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK 150
D+ ++ I++ CK L +A A M+++G D +L+DG+ + K
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 151 VDKAR-KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+ A L +M+ A + P +Y +LI KI++ +EA++L + M+ K P Y
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQ-MMKKQNYP---AYA 546
Query: 210 YLFDG-LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ 254
FDG L +FG L DA FL + + P Y ++E +
Sbjct: 547 EAFDGYLAKFGTLEDAKKFLDVLSSKD--SPSFAAYFHVIEAFYRE 590
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 27/276 (9%)
Query: 96 NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
SL ++ I +L G EA + M G +PD I+Y+ L+ G C ++++AR
Sbjct: 366 KSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEAR 425
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
+ D M G PD+ ++ ILIQG+CK +D+A+ +ML K ++ L DG
Sbjct: 426 GVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFN--SLIPEPNVQ 273
+ A FL M + P + Y ++++ L + + K+ + + ++ + N
Sbjct: 486 VIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLK--IKKSEEALDLLQMMKKQNYP 543
Query: 274 SYNILISGY-CKNGRVDEAMSIYQNMCLRNIVRDSETFKL---LINAFCKRKQCDKAIAL 329
+Y GY K G +++A + +DS +F +I AF + + A
Sbjct: 544 AYAEAFDGYLAKFGTLEDAKKFLDVLS----SKDSPSFAAYFHVIEAFYREGRLTDA--- 596
Query: 330 YKNNRDLCPFKILMDGLRKNGMEEVAQRVSQLYGAC 365
KN +CP + ++S+L+GA
Sbjct: 597 -KNLLFICPHHF-----------KTHPKISELFGAA 620
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 40/239 (16%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y L+ GLCK+K A L ++EA Q P++ + +I G CK+ ++KA + M
Sbjct: 408 YSQLVFGLCKAKRLEEARGVLDQMEA-QGCFPDIKTWTILIQGHCKNNELDKALACFANM 466
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
+++G D LI GF ++++ + L
Sbjct: 467 LEKGFDIDSNLLDVLIDGFVIHNKFEGASIFL---------------------------- 498
Query: 122 VCYEMIKRG-VQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
EM+K V+P +Y +L+D K ++A L MM + +Y GY
Sbjct: 499 --MEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAEAFDGY 552
Query: 181 -CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWN--FLTRMHYRGH 236
K +++A D+L+ P+ Y ++ + R GRL DA N F+ H++ H
Sbjct: 553 LAKFGTLEDAKKFL-DVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTH 610
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 47/358 (13%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +++S K +AI L E+E L KP++V +N+++ G GL A + M
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGL-KPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVR-----LLLNENSLDVCSFNIIMDALCKQGLL 116
G+ P + SSL+ K + +L N+ DV ++D K G L
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
A V ++M+ +++++ L+ G C + A L M + G+ PD ++N L
Sbjct: 277 PYARMV-FDMMD---AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
GY + + ++A+++ M K + PN V++ +F G + G +A +M G
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 237 RPPDLTPYNI--------ILETLCEQH---------------------------LDKANK 261
P T + +L + E H L A +
Sbjct: 393 GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE 452
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
IF I ++ S+N ++ GY GR +E ++ + M + D+ TF ++ + CK
Sbjct: 453 IFWG-IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL-SVCK 508
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 141/341 (41%), Gaps = 41/341 (12%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC---HADQWKEVR 90
N+V +N+++ GL L+ A+ L M + GI PD +T++SL G+ ++ +V
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 91 LLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD----- 143
+ E + +V S+ I K G A V +M + GV P+ + + L+
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCL 409
Query: 144 ----------GYCLK----CKVDKARKLFDMMIEAG----LVPDVW--------SYNILI 177
G+CL+ C A L DM ++G + W S+N ++
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
GY R +E + ML + P+A+T+ + G + + W + M R
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 238 PPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQ 296
P + + +++ L +LD+A ++ +P+ + +S CK R E I
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSS-CKIHRDLELAEIAW 588
Query: 297 NMCLRNIVRDSETFKLLINAFC---KRKQCDKAIALYKNNR 334
+S + ++IN + + + ++ L +NNR
Sbjct: 589 KRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNR 629
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 54 AQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE------NSLDVCSFNIIM 107
A KL EM +R D + ++ ++ + W++ L E + D ++
Sbjct: 42 ANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 108 DALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV 167
K+G E + +++ G++ +V L+ Y K++ +RK+F+ M + L
Sbjct: 98 VCSNKEGFA-EGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS 156
Query: 168 PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNF 227
S+N ++ Y K+ VD+A+ L ++M L P+ VT+ L G G DA
Sbjct: 157 ----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 228 LTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEP---NVQSYNILISGYCK 284
L RM G +P + +++ HL I ++ +V LI Y K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 285 NGRVDEAMSIYQNMCLRNIV 304
G + A ++ M +NIV
Sbjct: 273 TGYLPYARMVFDMMDAKNIV 292
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 31/289 (10%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
+PNL+I+NT+ G A KL MI G+ P+ TF ++ + +KE +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 92 LLNEN-----SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
+ LD+ ++ + G L +AH V + DV+SYT L+ GY
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV----FDKSPHRDVVSYTALIKGYA 211
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ ++ A+KLFD + V DV S+N +I GY + EA+ L +DM+ N+ P+
Sbjct: 212 SRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 207 TYKYLF-----DGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKAN 260
T + G GR W H G +L N +++ + L+ A
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLW---IDDHGFG---SNLKIVNALIDLYSKCGELETAC 321
Query: 261 KIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSET 309
+F L P +V S+N LI GY EA+ ++Q M +R ET
Sbjct: 322 GLFERL-PYKDVISWNTLIGGYTHMNLYKEALLLFQEM-----LRSGET 364
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 139/321 (43%), Gaps = 47/321 (14%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
+L ++ ++I ++G + A K+ + R DVV++++LI G+ + + L
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLF 223
Query: 94 NENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+E + DV S+N ++ + G EA + +M+K V+PD + ++ ++
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 153 KARK-------------------LFDMMIEAGLVP------------DVWSYNILIQGYC 181
R+ L D+ + G + DV S+N LI GY
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP-DAWNFLTRMHYRGHRPPD 240
+ EA+ L ++ML PN VT + G + W + Y R
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV----YIDKRLKG 399
Query: 241 LTPYNIILETLCEQH-----LDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIY 295
+T + + +L + + ++ A+++FNS++ ++ S+N +I G+ +GR D + ++
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL-HKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 296 QNMCLRNIVRDSETFKLLINA 316
M I D TF L++A
Sbjct: 459 SRMRKIGIQPDDITFVGLLSA 479
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 90/186 (48%), Gaps = 7/186 (3%)
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
+P+++ + + G+ L A KL+ MI GL+P+ +++ +++ K + E
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
+ +L + + L + GRL DA + +R D+ Y +++
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR-----DVVSYTALIKGY 210
Query: 252 CEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+ +++ A K+F+ IP +V S+N +ISGY + G EA+ ++++M N+ D T
Sbjct: 211 ASRGYIENAQKLFDE-IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 311 KLLINA 316
+++A
Sbjct: 270 VTVVSA 275
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 12/294 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ LC + A++ +E+ + + L Y ++ + K V+ Q + +M
Sbjct: 262 YNIMIRSLCIAGRGDLALEFYKEMME-KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE----VRLLLN-ENSLDVCSFNIIMDALCKQGLL 116
++ + F L+ FC + + KE +R L N E LD F I++ LC+ +
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
++A + +++KR D Y I++ GY + V KA + F+++ ++G P V +Y +
Sbjct: 381 VDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
+Q K+++ ++ NL +M+ + P++V + G R+ +AW + M +G
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Query: 237 RPPDLTPYNIILETLC-EQHLDKANKIFNSLIPEPNV---QSYNILISGYCKNG 286
+P Y+I ++ LC D+ KIFN + V ++ +IS KNG
Sbjct: 500 KPT-WKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNG 552
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 40/320 (12%)
Query: 47 KDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNII 106
+ GL N A + EM G+ P TF LI C
Sbjct: 725 RTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCE------------------------ 760
Query: 107 MDALCKQGL-LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAG 165
K+G + EA EMI+ G PD + C A+ D + + G
Sbjct: 761 -----KKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG 815
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
P +Y+I I+ C+I +++EA++ + + + TY + GL + G L A
Sbjct: 816 F-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGY 282
+ + M G +P ++I+ E+ L+K + + E P+V +Y +I GY
Sbjct: 875 DKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGY 934
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NRDLCP-- 338
G+V+EA + ++NM R D +T+ IN C+ + + A+ L ++ + P
Sbjct: 935 MSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Query: 339 --FKILMDGLRKNGMEEVAQ 356
F+ + GL + G ++A+
Sbjct: 995 INFRTVFYGLNREGKHDLAR 1014
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNL--VIYNTVIHGLCKDGLVNKAQKLCS 59
Y + LC+ G + L EL + + + L Y +++HGL + G + KA +
Sbjct: 822 YSIYIRALCRI---GKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 60 EMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEA 119
M + G P V ++SLI F Q ++V LE
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKV---------------------------LE- 910
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
C +M +P V++YT ++ GY KV++A F M E G PD +Y+ I
Sbjct: 911 --TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGR 220
C+ + ++A+ L +ML K + P+ + ++ +F GL R G+
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 131/334 (39%), Gaps = 80/334 (23%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D+ ++ I++ K + + V +M K G + D +Y I++ C+ + D A + +
Sbjct: 223 DIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML--------------------- 197
M+E G+ + +Y +L+ K E+VD ++ +DM+
Sbjct: 283 KEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
Query: 198 --------------TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR--------- 234
K + +A ++ L GLCR R+ DA + M R
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYG 402
Query: 235 ------------------------GHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIP- 268
RPP ++ Y I++ L + + +K +FN +I
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
Query: 269 --EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
EP+ + +++G+ RV EA ++ +M + I +++ + + C+ + D+
Sbjct: 463 GIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEI 522
Query: 327 IALYKNN-------RDLCPFKILMDGLRKNGMEE 353
I ++ RD F ++ + KNG +E
Sbjct: 523 IKIFNQMHASKIVIRDDI-FSWVISSMEKNGEKE 555
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
EM K G D+ ++TIL+ Y K+ K +F+ M ++G D +YNI+I+ C
Sbjct: 214 EMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
R D A+ ++M+ K + TYK L D + + ++ D + R + +
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV-DVVQSIADDMVRICEISEHDAF 332
Query: 245 NIILETLC-EQHLDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCL 300
+L++ C + +A ++ L + + + + IL+ G C+ R+ +A+ I M
Sbjct: 333 GYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKR 392
Query: 301 RNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
R + DS + ++I+ + ++ KA+ ++
Sbjct: 393 RKL-DDSNVYGIIISGYLRQNDVSKALEQFE 422
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 9/244 (3%)
Query: 5 LMSGLCKSKGSG--NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
L++ LC+ KG A +T +E+ V P+ + + LC+ G A K C + +
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFV-PDRELVQDYLGCLCEVGNTKDA-KSCLDSL 811
Query: 63 QRGIFPDVVTFSSLIYGFCHADQWKEVRLLL----NENSL-DVCSFNIIMDALCKQGLLL 117
+ FP V +S I C + +E L E SL D ++ I+ L ++G L
Sbjct: 812 GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
+A M + G +P V YT L+ + + +++K + M P V +Y +I
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
GY + +V+EA N +M + P+ TY + LC+ + DA L+ M +G
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIA 991
Query: 238 PPDL 241
P +
Sbjct: 992 PSTI 995
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
+D +L M + G D+ ++ ILI Y K +++ + + + E M +A Y
Sbjct: 205 LDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPE 269
+ LC GR A F M +G L Y ++L+ + + + +D I + ++
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGI-TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRI 323
Query: 270 PNVQ---SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
+ ++ L+ +C +G++ EA+ + + + + + D++ F++L+ C+
Sbjct: 324 CEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCR 376
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG+++ GL + A+ + ++ + KP + +Y ++I K+ + K + C +M
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIG-TKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 62 IQRGIFPDVVTFSSLIYGFCH----ADQWKEVRLLLNE-NSLDVCSFNIIMDALCKQGLL 116
P VVT++++I G+ + W R + S D +++ ++ LC+
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
+A + EM+ +G+ P I++ + G + K D AR
Sbjct: 976 EDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 16/229 (6%)
Query: 155 RKLFDMMIEAG--LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
R LF M G + D W+ I+I Y + + A+ ++M L+P++ T+K L
Sbjct: 698 RSLFYEMRRQGCLITQDTWA--IMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLI 755
Query: 213 DGLC-RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSL--IP 268
LC + GR + R R PD L LCE + A +SL I
Sbjct: 756 TVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG 815
Query: 269 EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
P +Y+I I C+ G+++EA+S + + D T+ +++ +R KA+
Sbjct: 816 FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALD 875
Query: 329 LYKNNRDLCP-------FKILMDGLRKNGMEEVAQRVSQLYG-ACDPDV 369
+ +++ +++ ++ +E+V + ++ G +C+P V
Sbjct: 876 KVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 149/320 (46%), Gaps = 63/320 (19%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR---LLLN 94
+N+++ G +GL +A++L EM +R +VV+++ L+ G+ E R L+
Sbjct: 51 WNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFELMP 106
Query: 95 ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
E +V S+ ++ ++G++ EA ++ + M +R + +S+T++ G ++DKA
Sbjct: 107 ER--NVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
RKL+DMM V DV + +I G C+ RVDEA + ++M + N VT+ + G
Sbjct: 161 RKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITG 212
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQS 274
YR + +D A K+F ++PE S
Sbjct: 213 ------------------YRQN-----------------NRVDVARKLFE-VMPEKTEVS 236
Query: 275 YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--N 332
+ ++ GY +GR+++A ++ M ++ ++ +I F + + KA ++
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVI----ACNAMIVGFGEVGEISKARRVFDLME 292
Query: 333 NRDLCPFKILMDGLRKNGME 352
+RD ++ ++ + G E
Sbjct: 293 DRDNATWRGMIKAYERKGFE 312
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 29/250 (11%)
Query: 87 KEVRLLLNENSLDV----CSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
K ++L+L L CSF I L + G + EA + + + S+ ++
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEI--SRLSRIGKINEARKFFDSLQFKAIG----SWNSIV 55
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
GY +AR+LFD M E +V S+N L+ GY K + EA N+ E M +N+V
Sbjct: 56 SGYFSNGLPKEARQLFDEMSERNVV----SWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANK 261
++ + G + G + +A + RM R + ++ L + +DKA K
Sbjct: 112 ----SWTAMVKGYMQEGMVGEAESLFWRMPERNE-----VSWTVMFGGLIDDGRIDKARK 162
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
+++ ++P +V + +I G C+ GRVDEA I+ M RN+V T+ +I + +
Sbjct: 163 LYD-MMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNN 217
Query: 322 QCDKAIALYK 331
+ D A L++
Sbjct: 218 RVDVARKLFE 227
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 100 VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFD 159
+ S+N I+ GL EA + EM +R +V+S+ L+ GY + +AR +F+
Sbjct: 48 IGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNGLVSGYIKNRMIVEARNVFE 103
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
+M E +V S+ +++GY + V EA +L M +N V++ +F GL G
Sbjct: 104 LMPERNVV----SWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDG 155
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIPEPNVQSYNIL 278
R+ A M + D+ ++ LC E +D+A IF+ + E NV ++ +
Sbjct: 156 RIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEM-RERNVVTWTTM 209
Query: 279 ISGYCKNGRVDEAMSIYQNM 298
I+GY +N RVD A +++ M
Sbjct: 210 ITGYRQNNRVDVARKLFEVM 229
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 150/362 (41%), Gaps = 76/362 (20%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
N+V + ++ G ++G+V +A+ L M +R + V+++ + G + + R L
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 94 NENSL-DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+ + DV + ++ LC++G + EA + EM +R +V+++T ++ GY +VD
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVD 220
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP-NAV----- 206
ARKLF++M E V S+ ++ GY R+++A E M K ++ NA+
Sbjct: 221 VARKLFEVMPEKTEV----SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 207 ---------------------TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP--PDLTP 243
T++ + R G +A + +M +G RP P L
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 244 YNIILETLCE---------------------------------QHLDKANKIFNSLIPEP 270
+ TL L KA +F+
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF-SSK 395
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
++ +N +ISGY +G +EA+ I+ M + + T ++ A + ++ + ++
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 331 KN 332
++
Sbjct: 456 ES 457
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 155/391 (39%), Gaps = 68/391 (17%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
++ GLC+ A E+ + N+V + T+I G ++ V+ A+KL M ++
Sbjct: 178 MIGGLCREGRVDEARLIFDEMR-----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK 232
Query: 65 ---------------GIFPDVVTF------------SSLIYGFCHADQWKEVRLLLN-EN 96
G D F +++I GF + + R + +
Sbjct: 233 TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME 292
Query: 97 SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS---------------YTIL 141
D ++ ++ A ++G LEA + +M K+GV+P S Y
Sbjct: 293 DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Query: 142 MDGYCLKCKVDK----ARKLFDM------MIEAGLVPDVWS------YNILIQGYCKIER 185
+ + ++C+ D A L M +++A LV D +S +N +I GY
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 186 VDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYN 245
+EA+ + +M + +PN VT + G+L + M + P + Y+
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYS 472
Query: 246 IILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCK-NGRVDEAMSIYQNMCLRNI 303
++ L +DKA ++ S+ +P+ + L+ G CK + R+D A + N
Sbjct: 473 CTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL-GACKTHSRLDLA-EVAAKKLFENE 530
Query: 304 VRDSETFKLLINAFCKRKQCDKAIALYKNNR 334
++ T+ LL + R + + KN R
Sbjct: 531 PDNAGTYVLLSSINASRSKWGDVAVVRKNMR 561
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 12/261 (4%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKP-NLVIYNTVIHGLCKDGLVNKAQKLCS 59
Y TL+ ++ +A++T ++++ Q P + V +N +++ +K +L
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMD--QYGTPRSAVSFNALLNACLHSKNFDKVPQLFD 161
Query: 60 EMIQR--GIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSLDVCS--FNIIMDALCK 112
E+ QR I PD +++ LI +C + ++ E+ + ++V + F I+ +L K
Sbjct: 162 EIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYK 221
Query: 113 QGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWS 172
+G L A + EM+K+G + D +Y + + K ++ ++L + M GL PD S
Sbjct: 222 KGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTIS 280
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMH 232
YN L+ YC+ +DEA + E + N PNA T++ L LC + RL + + +
Sbjct: 281 YNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC-YSRLYEQGYAIFKKS 339
Query: 233 YRGHRPPDLTPYNIILETLCE 253
H+ PD ++ L E
Sbjct: 340 VYMHKIPDFNTLKHLVVGLVE 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 103 FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCK-VDKARKLFDMM 161
++ ++ + + + A +M + G +S+ L++ CL K DK +LFD +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNA-CLHSKNFDKVPQLFDEI 163
Query: 162 IEA--GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
+ ++PD SY ILI+ YC ++A+ + M K + + + + L + G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI---FNSLIPEPNVQSYN 276
L A N M +G D YN+ + + ++ ++ ++ +S+ +P+ SYN
Sbjct: 224 ELEVADNLWNEMVKKGCEL-DNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 277 ILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNN--- 333
L++ YC+ G +DEA +Y+ + N ++ TF+ LI C + ++ A++K +
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYM 342
Query: 334 ---RDLCPFKILMDGLRKNGMEEVAQ 356
D K L+ GL +N + A+
Sbjct: 343 HKIPDFNTLKHLVVGLVENKKRDDAK 368
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG L+ C S AI+ +++++ + ++ + + T++ L K G + A L +EM
Sbjct: 177 YGILIKSYCDSGTPEKAIEIMRQMQG-KGMEVTTIAFTTILSSLYKKGELEVADNLWNEM 235
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+++G D ++ I + + V+ L+ E S D S+N +M A C++G+L
Sbjct: 236 VKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGML 294
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V + P+ ++ L+ C ++ +F + +PD + L
Sbjct: 295 DEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHL 354
Query: 177 IQGYCKIERVDEAMNLCEDMLTK 199
+ G + ++ D+A L + K
Sbjct: 355 VVGLVENKKRDDAKGLIRTVKKK 377
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 153/319 (47%), Gaps = 32/319 (10%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-NS 97
N I L + G +++A+KL + I +++S++ G+ ++ R L +E
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSI----SSWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
++ S+N ++ K G + EA V M +R +V+S+T L+ GY KVD A L
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESL 132
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA--VTYKYLFDGL 215
F M E V S+ +++ G+ + R+D+A L E ++P+ + + GL
Sbjct: 133 FWKMPEKNKV----SWTVMLIGFLQDGRIDDACKLYE------MIPDKDNIARTSMIHGL 182
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSY 275
C+ GR+ +A M R +T ++ +D A KIF+ ++PE S+
Sbjct: 183 CKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFD-VMPEKTEVSW 237
Query: 276 NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--N 333
++ GY +NGR+++A +++ M ++ ++ +I+ ++ + KA ++ +
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPVI----ACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 334 RDLCPFKILMDGLRKNGME 352
R+ ++ ++ +NG E
Sbjct: 294 RNDASWQTVIKIHERNGFE 312
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 142/284 (50%), Gaps = 27/284 (9%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVR-LL 92
N++ +N ++ G K+G +++A+K+ M +R +VV++++L+ G+ H + L
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLF 133
Query: 93 LNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+ S+ +++ + G + +A + YEMI D I+ T ++ G C + +VD
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKL-YEMIP---DKDNIARTSMIHGLCKEGRVD 189
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
+AR++FD M E ++ ++ ++ GY + RVD+A + + M K V++ +
Sbjct: 190 EAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML 241
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPN 271
G + GR+ DA M + + N ++ L ++ + KA ++F+S+ E N
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVK-----PVIACNAMISGLGQKGEIAKARRVFDSM-KERN 295
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
S+ +I + +NG EA+ ++ M + + TF LI+
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGV---RPTFPTLIS 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 63/281 (22%)
Query: 88 EVRLLLNE-NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
E R L + +S + S+N ++ + +A + EM R ++IS+ L+ GY
Sbjct: 35 EARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR----NIISWNGLVSGYM 90
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
++D+ARK+FD+M E +V S+ L++GY +VD A +L M KN V
Sbjct: 91 KNGEIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDVAESLFWKMPEKN----KV 142
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
++ + G + GR+ DA C+ + +
Sbjct: 143 SWTVMLIGFLQDGRIDDA---------------------------CKLY---------EM 166
Query: 267 IPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
IP+ + + +I G CK GRVDEA I+ M R+++ T+ ++ + + + D A
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDA 222
Query: 327 IALYKNNRDLCPFKI------LMDGLRKNGMEEVAQRVSQL 361
++ D+ P K ++ G +NG E A+ + ++
Sbjct: 223 RKIF----DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 50/211 (23%)
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
K+ +ARKLFD + S+N ++ GY +A L ++M +N++
Sbjct: 32 KIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEMPDRNII------- 80
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE 269
+WN L + + +D+A K+F+ L+PE
Sbjct: 81 --------------SWNGLVSGYMKN------------------GEIDEARKVFD-LMPE 107
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
NV S+ L+ GY NG+VD A S++ M +N V ++ +++ F + + D A L
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV----SWTVMLIGFLQDGRIDDACKL 163
Query: 330 YK--NNRDLCPFKILMDGLRKNGMEEVAQRV 358
Y+ ++D ++ GL K G + A+ +
Sbjct: 164 YEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 48/306 (15%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
L L KSK + + +E PN Y + LCK ++ A +C +M++
Sbjct: 239 ALFGKLGKSKAAFDVFSKTEEFG----FTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLL-----LNENSL-------------------- 98
G+ + ++I FC + +E + E SL
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 99 ----------------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ F+ ++ +LC+ + +A A+ +MI +G P + +++
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
+D+A+++ +M GL PDV++Y ++I GY K +DEA + + K+
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLD--KAN 260
+ VTY L G C+ +A L M G + P+ YN ++++ C + LD KA
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ-PNADEYNKLIQSFCLKALDWEKAE 533
Query: 261 KIFNSL 266
+F +
Sbjct: 534 VLFEEM 539
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 6/211 (2%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI 62
TL++ LCK+ G+ Q + + + + + ++ VIH LC+ V A+ L +MI
Sbjct: 340 ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMI 399
Query: 63 QRGIFPDVVTFSSLIYGFCHA---DQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLL 117
+G P F+ +++ D+ KEV L+ L DV ++ +I+ K G++
Sbjct: 400 SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EA + E K+ + ++Y L+ GYC + D+A KL + M G+ P+ YN LI
Sbjct: 460 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 178 QGYC-KIERVDEAMNLCEDMLTKNLVPNAVT 207
Q +C K ++A L E+M K L NA++
Sbjct: 520 QSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 105/239 (43%), Gaps = 17/239 (7%)
Query: 135 VISYTILMDGYCLKCKVDKARKLFDMMI---EAGLVPDVWSYNILIQGYCKIERVDEAMN 191
V++ IL + L K+ K++ FD+ E G P+ +Y + ++ CK +D A +
Sbjct: 228 VLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACS 287
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR-PPDLTPYNIILET 250
+CE ML ++ + C+ G+ +A++ + PP ++
Sbjct: 288 VCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITA 345
Query: 251 LCEQH--LDKANKIFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR 305
LC+ + A ++ L E ++ ++ +I C+ V +A ++ +M +
Sbjct: 346 LCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAP 405
Query: 306 DSETFKLLINAFCKRKQCDKAIALYK--NNRDLCP----FKILMDGLRKNGMEEVAQRV 358
+ F L+++A K D+A + K +R L P + +++ G K GM + AQ +
Sbjct: 406 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 156/381 (40%), Gaps = 55/381 (14%)
Query: 6 MSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRG 65
+S L K A++ L +P Y ++ L K G N+AQKL EM++ G
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 66 IFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL------DVCSFNIIMDALCKQGLLLEA 119
+ P V +++L+ + ++ + +L++ DV +++ ++ A
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARK-LFDMMIEAGLVPDVWSYNILIQ 178
++ EM +R + P+ ++ I++ GY + D+ K L DM++ PDVW+ NI++
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR---FGRLPDAWNFLTRMHYRG 235
+ + ++D + E + P T+ L + + ++ ++ ++ +
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF-- 332
Query: 236 HRPPDLTPYNIILETLC--------EQHLDKA-------------------------NKI 262
P + YN I+E E D+ +K+
Sbjct: 333 --PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 390
Query: 263 FNSL-------IPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
+S+ IPE N YN +IS K + E +Y M R V DS TF++++
Sbjct: 391 ISSVQLAAKFEIPE-NTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVE 449
Query: 316 AFCKRKQCDKAIALYKNNRDL 336
A+ K DK L + + L
Sbjct: 450 AYEKEGMNDKIYYLEQERQKL 470
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 20/347 (5%)
Query: 11 KSKGSGNAIQTLQELEALQLVKPNL----VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGI 66
KS G Q ++E+ AL++VK + + Y+T+I + L NKA + M + G+
Sbjct: 194 KSLRFGRQFQLIEEM-ALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGL 252
Query: 67 FPDVVTFSSLIYGFCHADQWKEVRLLLNENSL------DVCSFNIIMDALCKQGLLLEAH 120
PD VT+S+++ + + + +EV L L E ++ D +F+++ + G
Sbjct: 253 MPDEVTYSAILDVYSKSGKVEEV-LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIR 311
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
V EM V+P+V+ Y L++ K AR LF+ M+EAGL P+ + L++ Y
Sbjct: 312 YVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY 371
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
K +A+ L E+M K + + Y L + G +A M PD
Sbjct: 372 GKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPD 431
Query: 241 LTPYNIILETLCE-QHLDKANKIFNSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
Y +L +KA ++F ++ + NV L+ K R+D+ + ++
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491
Query: 297 NMCLRNIVRDSETFKLLIN--AFCKRKQ-CDKAIA-LYKNNRDLCPF 339
R + D L++ A C+ + +K +A L + N+ L F
Sbjct: 492 LSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 538
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 13/345 (3%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y + L K+ N LQ++ L+ + + YN+++ L K+ ++ + +EM
Sbjct: 324 YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEM 383
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+ RG+ P+ T ++ + FC A E L S S+N ++ LC +
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESV 443
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A+ V I RG +++ L + C K K D AR+L E L+P + +
Sbjct: 444 EQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I C + +V++A+ + E + + + L G R A + RM +G+
Sbjct: 504 ISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGY 563
Query: 237 RPPDLTPYNIILETLCEQHLDKANKIFNSLIP------EPNVQSYNILISGYCKNGRVDE 290
P + Y +++ +CE + N F +L+ E VQ+YN+ I G G+
Sbjct: 564 TPTR-SLYRNVIQCVCEMESGEKN-FFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKL 621
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
A +Y M I + L++ ++ K ++ A+ + + R+
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLRE 666
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 147/359 (40%), Gaps = 23/359 (6%)
Query: 26 EALQLVK--------PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI 77
EAL+L + P + YN +IH LC + V +A + I RG F TFS+L
Sbjct: 410 EALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLT 469
Query: 78 YGFCHADQWKEVR-LLLNENSLDVCSFNI----IMDALCKQGLLLEAHAVCYEMIKRGVQ 132
C + R L++ D+ I I+ ALC G + +A + K GV
Sbjct: 470 NALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVD 529
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
+T L+ G + D A KL M E G P Y +IQ C++E ++
Sbjct: 530 TSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFT 589
Query: 193 CEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET-L 251
+L + V LF F P + M R P + ++L++ L
Sbjct: 590 TLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYL 649
Query: 252 CEQHLDKANKIFNSLIPEPNVQS--YNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSET 309
+ + A F+ L + + Y ++I G CK ++D+AM + M + E
Sbjct: 650 KNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIEC 709
Query: 310 FKLLINAFCKRKQCDKAIALY----KNNRDLCPF---KILMDGLRKNGMEEVAQRVSQL 361
+++ I C ++ D+A+ L K+ R + F +L + ++ G+ E R+ +
Sbjct: 710 YEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNI 768
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 15/249 (6%)
Query: 129 RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDE 188
RG+ D Y +L++ + D +FD + G V V +++IL++ +CK ++DE
Sbjct: 211 RGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSILVKKFCKQGKLDE 269
Query: 189 AMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL 248
A + +L + L D LC + +A L + G D YNI +
Sbjct: 270 AEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMD-RAYNIWI 328
Query: 249 ETLCEQ-HLDKANKIFNSLIP----EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
L + L+ + P E V YN ++ K +D I M +R +
Sbjct: 329 RALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGV 388
Query: 304 VRDSETFKLLINAFCKRKQCDKAIALYKNNRDL------CPFKILMDGLRKNGMEEVAQR 357
+ +T + FCK D+A+ LY++ ++ + L+ L N E V Q
Sbjct: 389 SPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCAN--ESVEQA 446
Query: 358 VSQLYGACD 366
L GA D
Sbjct: 447 YDVLKGAID 455
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 11/269 (4%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE 95
V ++ ++ CK G +++A+ ++ L+ C +++E LL+E
Sbjct: 252 VTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDE 311
Query: 96 NSLDVC-----SFNIIMDALCKQGLLLEAHAVCYEMIK-RGVQPDVISYTILMDGYCLKC 149
L ++NI + AL K G L ++ G + +V Y ++ +
Sbjct: 312 IKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKEN 371
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+D + M+ G+ P+ + N + +CK VDEA+ L P A++Y
Sbjct: 372 NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYN 431
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE 269
YL LC + A++ L RGH T ++ + LC + + E
Sbjct: 432 YLIHTLCANESVEQAYDVLKGAIDRGHFLGGKT-FSTLTNALCWKGKPDMARELVIAAAE 490
Query: 270 PNVQSYNI----LISGYCKNGRVDEAMSI 294
++ I +IS C G+V++A+ I
Sbjct: 491 RDLLPKRIAGCKIISALCDVGKVEDALMI 519
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 174/397 (43%), Gaps = 54/397 (13%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK- 87
++ + ++V +N +I G + GLV A +C M + D VT ++L+ + K
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 88 --EVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
EV+ +S D+ + +MD K G +++A V V+ D+I + L+
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV----FDSTVEKDLILWNTLLA 449
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
Y +A +LF M G+ P+V ++N++I + +VDEA ++ M + ++P
Sbjct: 450 AYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIP 509
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL-------------------TPY 244
N +++ + +G+ + G +A FL +M G RP T +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIH 569
Query: 245 NIILETLCEQHL-----------------DKANKIFNSLIPEPNVQSYNILISGYCKNGR 287
I+ L L +KA K+F S + + N +IS Y G
Sbjct: 570 GYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKL-YSELPLSNAMISAYALYGN 628
Query: 288 VDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN---NRDLCP----FK 340
+ EA+++Y+++ + D+ T +++A ++AI ++ + R + P +
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 341 ILMDGLRKNGMEEVAQRVSQLYGACDPDVALVRNQLA 377
+++D L G E A R+ + PD ++++ +A
Sbjct: 689 LMVDLLASAGETEKALRLIEEM-PFKPDARMIQSLVA 724
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 148/336 (44%), Gaps = 13/336 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
++ TL++ +S SG A++ ++ L+ V PN++ +N +I L ++G V++A+ + +
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQ-LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL---NENSLDVCSFNIIMD-ALCKQGLL 116
M GI P+++++++++ G +E L L E+ L +F+I + + C
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 117 LEAHAVCYEMIKRGVQPD--VISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
L + I R +Q V T L+D Y ++KA K+F + L ++ N
Sbjct: 562 LHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG----SKLYSELPLSN 617
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYR 234
+I Y + EA+ L + L P+ +T + G + A T + +
Sbjct: 618 AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 235 GHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMS 293
P L Y ++++ L +KA ++ + +P+ + L++ C R E +
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVAS-CNKQRKTELVD 736
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
L + +S + + NA+ D+ + +
Sbjct: 737 YLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKM 772
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 144/356 (40%), Gaps = 86/356 (24%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
N V +N ++ G ++G +A +L S+M ++G+ P VT S+ + + +E +
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK--- 294
Query: 94 NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
++HA+ I G++ D I T L++ YC ++
Sbjct: 295 ------------------------QSHAIA---IVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A +FD M E DV ++N++I GY + V++A+ +C+ M + L + VT L
Sbjct: 328 AEMVFDRMFE----KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 214 GLCRF-----------------------------------GRLPDAWNFLTRMHYRGHRP 238
R G + DA + +
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA-----KKVFDSTVE 438
Query: 239 PDLTPYNIILETLCEQHLD-KANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSI 294
DL +N +L E L +A ++F + E PNV ++N++I +NG+VDEA +
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDM 498
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNG 350
+ M I+ + ++ ++N + ++AI + K+ GLR N
Sbjct: 499 FLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLR--------KMQESGLRPNA 546
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 26/279 (9%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFC-HADQ----------- 85
+ +I LC+ G V+ A +L M Q + D +S L+ C H D
Sbjct: 182 FGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLED 241
Query: 86 WKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
++ R S + + ++M L + G E +V +M V+PD++ YTI++ G
Sbjct: 242 LRKTRF-----SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV 296
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
KA KLFD ++ GL PDV++YN+ I G CK ++ A+ + M PN
Sbjct: 297 IADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 356
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRG-HRPPD-----LTPYNIILETLCEQHLDKA 259
VTY L L + G L A M G +R ++ Y + E +C L +
Sbjct: 357 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Query: 260 NKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
N + ++ +IS C+ G +D+A+ + ++
Sbjct: 417 AFNMNVFVKSSRIEE---VISRLCEKGLMDQAVELLAHL 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 163/387 (42%), Gaps = 28/387 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ L KS N L LE + I+ VI G + +A ++ ++
Sbjct: 75 YRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKI 134
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKE------VRLLLNENSLDVCSFNIIMDALCKQGL 115
P T ++L+ Q E V+ L+ +F I++DALC+ G
Sbjct: 135 PNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGE 194
Query: 116 LLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDM------MIEAGLVPD 169
+ A + M + V D Y+ L+ C K FD+ + + P
Sbjct: 195 VDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH----KDSSCFDVIGYLEDLRKTRFSPG 250
Query: 170 VWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT 229
+ Y ++++ + R E +++ M + P+ V Y + G+ P A
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310
Query: 230 RMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIF---NSLIPEPNVQSYNILISGYCKN 285
+ G PD+ YN+ + LC+Q+ ++ A K+ N L EPNV +YNILI K
Sbjct: 311 ELLLLGL-APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKA 369
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDG 345
G + A ++++ M + R+S TF ++I+A+ + + A L + ++ F
Sbjct: 370 GDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF------ 423
Query: 346 LRKNGMEEVAQRVSQLYGACDPDVALV 372
++ + +EEV R+ + G D V L+
Sbjct: 424 VKSSRIEEVISRLCE-KGLMDQAVELL 449
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 23/252 (9%)
Query: 84 DQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG---VQPDVISYTI 140
+Q VR + NEN +N I+ K G L+ A + M+ +P + +Y I
Sbjct: 196 NQVLSVRHIGNENL-----YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHI 250
Query: 141 LM--------DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
L + Y ++ R LF M+++G+ PDV++ N L++GY V++A+ +
Sbjct: 251 LFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRI 310
Query: 193 CEDM-LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
M + + PN+ TY YL GLC GR +A L+ M +G P+ YN ++
Sbjct: 311 FHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGF-VPNGKSYNSLVNAF 369
Query: 252 C-EQHLDKANKIFNSLIPEPNVQ---SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDS 307
+D A K +I V SY L+ C+ G+ DEA + + + + +V D
Sbjct: 370 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DR 428
Query: 308 ETFKLLINAFCK 319
+++ L+N K
Sbjct: 429 DSYDKLVNVLHK 440
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 32 KPNLVIYNTVIHGLCKDG--------LVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA 83
+P + Y+ + L G + + L +M+ GI PDV + L+ G+ +
Sbjct: 242 RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLS 301
Query: 84 DQWKEVRLLLNENSL------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS 137
+ + ++ S+ + +++ ++ LC QG + A + EM +G P+ S
Sbjct: 302 LHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKS 361
Query: 138 YTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDML 197
Y L++ + L ++D A K MIE G V D SY L+ C+ + DEA L E +
Sbjct: 362 YNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 421
Query: 198 TKNLV 202
K LV
Sbjct: 422 EKQLV 426
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 31/173 (17%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+ G S +A++ ++ + +PN Y+ +IHGLC G A++L SEM +
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCY 124
G P+ +++SL+ +A G + +A +
Sbjct: 354 GFVPNGKSYNSLV------------------------------NAFALSGEIDDAVKCLW 383
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
EMI+ G D ISY L+D C K K D+A +L +M+ E LV D SY+ L+
Sbjct: 384 EMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLV 435
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLT-KNL--VPNAVTYKYLFDGLCRFGRLPDAW---- 225
YN +I + K ++ A+N+ M+T KNL P TY LF L GR +++
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKAL--LGRGNNSYINHV 267
Query: 226 -----NFLTRMHYRGHRPPDLTPYNIILET-LCEQHLDKANKIFNSLIP----EPNVQSY 275
L R PD+ N +++ + H++ A +IF+ + EPN +Y
Sbjct: 268 YMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTY 327
Query: 276 NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA----LYK 331
+ LI G C GR A + M + V + +++ L+NAF + D A+ + +
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 332 NNR--DLCPFKILMDGLRKNGMEEVAQRVSQL 361
N R D ++ L+D + G + A R+ ++
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLEM 419
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 161/381 (42%), Gaps = 59/381 (15%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y ++ L + + A ++EL + + ++NTVI+ K G V A K M
Sbjct: 177 YSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMM 236
Query: 62 IQRGIFPDVVTFSSLI-------------YGFCHA------------------------D 84
++ G+ P+V T L+ + F H D
Sbjct: 237 LEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYD 296
Query: 85 QWKEVRLLLNENS--LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ +EV L+ ++ L + ++ ++++A +QG + A ++ M G P++I+Y L+
Sbjct: 297 KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLI 356
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
GY K++ A+ LF + GL PD SY +I+G+ + + +EA + +++
Sbjct: 357 TGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYK 416
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
PN+ L + ++G A + M G Y+ IL + Q +K KI
Sbjct: 417 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG------CQYSSILGIIL-QAYEKVGKI 469
Query: 263 FNSLIP-----------EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFK 311
++P N S++ L+ Y K+G VD+ + + + R+ +S +
Sbjct: 470 --DVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYH 527
Query: 312 LLINAFCKRKQCDKAIALYKN 332
LLI + + Q A+ +Y +
Sbjct: 528 LLICSCKESGQLTDAVKIYNH 548
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 11/274 (4%)
Query: 63 QRGIFPDVVTFSSL--IYGFCH-ADQWKEVRLLLNENSLDVCS--FNIIMDALCKQGLLL 117
Q+ I PDV F + IY C D+ + + + ++ + +N +++ + L
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 118 EAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILI 177
E EMI+ G P+ +++ +L+D Y K +LF + G+V DV SYN +I
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTII 740
Query: 178 QGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHR 237
Y K + + ++M + Y L D + ++ + L RM +
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK-KSTS 799
Query: 238 PPDLTPYNIILETLCEQH-LDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMS 293
PD YNI++ EQ +D+ + L P++ SYN LI Y G V+EA+
Sbjct: 800 GPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVG 859
Query: 294 IYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
+ + M RNI+ D T+ L+ A + + +AI
Sbjct: 860 LVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAI 893
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN V +N ++ K L K +L + G+ DV++++++I + + +
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSA 755
Query: 93 LNENSLDVCS-----FNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ D S +N ++DA K + + ++ M K PD +Y I+++ Y
Sbjct: 756 IKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGE 815
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ +D+ + + E+GL PD+ SYN LI+ Y V+EA+ L ++M +N++P+ VT
Sbjct: 816 QGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 208 YKYLFDGLCR 217
Y L L R
Sbjct: 876 YTNLVTALRR 885
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 4/218 (1%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
N +YN VI+ + +++ EMI+ G P+ VTF+ L+ + A +K+V L
Sbjct: 663 NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 722
Query: 94 ----NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
+DV S+N I+ A K + M G + +Y L+D Y
Sbjct: 723 LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 150 KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYK 209
+++K R + M ++ PD ++YNI+I Y + +DE ++ +++ L P+ +Y
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
L G + +A + M R P +T N++
Sbjct: 843 TLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 152/341 (44%), Gaps = 36/341 (10%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE---VR 90
NL I +T+I G ++A+KL + G+ D + FS ++ + A +E V
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 91 LLLNENS---LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+++E DV F ++ K L + + Y + K G+ + Y +++
Sbjct: 617 EIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCAR 676
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK---IERVDEAMNLCEDMLTKNLVPN 204
+D+ F+ MI G P+ ++N+L+ Y K ++V+E L + ++ V +
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK----RHGVVD 732
Query: 205 AVTYKYLFDGLCRFGRLPDAWNF---LTRMHYRGHRPPDLTPYNIILETLCEQHLDKANK 261
++Y + + +G+ D N + M + G L YN +L+ + DK +
Sbjct: 733 VISYNTI---IAAYGKNKDYTNMSSAIKNMQFDGF-SVSLEAYNTLLDAYGK---DKQME 785
Query: 262 IFNSLIPE-------PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
F S++ P+ +YNI+I+ Y + G +DE + + + + D ++ LI
Sbjct: 786 KFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLI 845
Query: 315 NAFCKRKQCDKAIALYKN--NRDLCPFKI----LMDGLRKN 349
A+ ++A+ L K R++ P K+ L+ LR+N
Sbjct: 846 KAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRN 886
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 147/347 (42%), Gaps = 62/347 (17%)
Query: 71 VTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDAL----CKQ-GLLLEAHAVCYE 125
+FSSL+ + + LL E +F + L CK+ G L +A +
Sbjct: 489 TSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNH 548
Query: 126 MIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIER 185
++ + ++ + ++D Y + + +A KL+ + +G+V D ++I+++ Y K
Sbjct: 549 KMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGS 608
Query: 186 VDEAMNLCEDM-LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP------ 238
++EA ++ E M K++VP+ YLF + R + D + L ++YR +
Sbjct: 609 LEEACSVLEIMDEQKDIVPDV----YLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQ 664
Query: 239 --------------------------------PDLTPYNIILETLCEQHL-DKANKIFNS 265
P+ +N++L+ + L K N++F
Sbjct: 665 EMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF-- 722
Query: 266 LIPEP----NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRK 321
L+ + +V SYN +I+ Y KN S +NM E + L++A+ K K
Sbjct: 723 LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 322 QCDKAIALYKNNR------DLCPFKILMDGLRKNG-MEEVAQRVSQL 361
Q +K ++ K + D + I+++ + G ++EVA + +L
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 40/322 (12%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
Q+ PNL ++N +I +KA ++M++ I+PD +TF LI A E
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI----KASSEME 131
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQ---------GLLLEAHAVCYEMIKRGVQPDVISYT 139
L+ + + F D + G + A + +M R DV+S+T
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR----DVVSWT 187
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
++ GYC V+ AR++FD M L ++++I+I GY K ++A++L E M +
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 200 NLVPNAVTYKYLFDGLCRFGRL---PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-- 254
+V N + G L A+ ++ + H N+IL T
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH---------MTVNLILGTALVDMF 294
Query: 255 ----HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
++KA +F L PE + S++ +I G +G +AM + M + TF
Sbjct: 295 WRCGDIEKAIHVFEGL-PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 353
Query: 311 KLLINAFCKRKQCDKAIALYKN 332
+++A +K + +Y+N
Sbjct: 354 TAVLSACSHGGLVEKGLEIYEN 375
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 17/321 (5%)
Query: 30 LVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
+V PN V + + G K GL +A + M G PD + F ++I + + K+
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 90 RLLLNE-NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
RLL E +S DV ++N+++ K+G A + M K V+ + ++ +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+D + I+ GL +++ + L+ Y K E+++ A + E + KN V +
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN----DVFW 396
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP 268
+ G G M G+ D T + +L T H + F+S+I
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT-FTSLLSTCAASHDLEMGSQFHSIII 455
Query: 269 EP----NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCD 324
+ N+ N L+ Y K G +++A I++ MC RD+ T+ +I ++ + +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC----DRDNVTWNTIIGSYVQDENES 511
Query: 325 KAIALYKNNRDLCPFKILMDG 345
+A L+K +LC I+ DG
Sbjct: 512 EAFDLFK-RMNLCG--IVSDG 529
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 11/221 (4%)
Query: 99 DVCSFNIIMD---ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKAR 155
DV ++N ++ ++ K G +L + +E + P+ +++I++ + V+ R
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFE---NQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
++ MI+ GL + + L+ Y K +R+ +A + E ++ PN V + LF G
Sbjct: 181 QIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGY 236
Query: 216 CRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSY 275
+ G +A RM GHRP L +I + L A +F + P+V ++
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-SSPDVVAW 295
Query: 276 NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
N++ISG+ K G A+ + NM ++ T +++A
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 27/289 (9%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
NL + N ++ K G + A+++ M R D VT++++I + + E L
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESEAFDLF 517
Query: 94 NENSLDVCSFNIIMDALC----------KQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
+++C I+ D C GL C +K G+ D+ + + L+D
Sbjct: 518 KR--MNLC--GIVSDGACLASTLKACTHVHGLYQGKQVHCLS-VKCGLDRDLHTGSSLID 572
Query: 144 GYCLKCKVDK-ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
Y KC + K ARK+F + E +V S N LI GY + ++EA+ L ++MLT+ +
Sbjct: 573 MYS-KCGIIKDARKVFSSLPEWSVV----SMNALIAGYSQ-NNLEEAVVLFQEMLTRGVN 626
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP-DLTPYNIILETLCEQHLDKANK 261
P+ +T+ + + + L F ++ RG + +++ + + + +A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 262 IFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+F+ L ++ + ++SG+ +NG +EA+ Y+ M ++ D TF
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 125/289 (43%), Gaps = 35/289 (12%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
L + ++V N +I G ++ L +A L EM+ RG+ P +TF++++ CH +
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA-CHKPE--- 643
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
SL + + + H ++ KRG + I + G +
Sbjct: 644 --------SLTLGT---------------QFHG---QITKRGFSSEGEYLGISLLGMYMN 677
Query: 149 CK-VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ + +A LF E + + ++ G+ + +EA+ ++M ++P+ T
Sbjct: 678 SRGMTEACALFS---ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
+ + L + + + + H +LT +I + ++++F+ +
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 268 PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
NV S+N LI+GY KNG ++A+ I+ +M +I+ D TF ++ A
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTA 843
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 139/333 (41%), Gaps = 39/333 (11%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ 63
+L+ S+G A EL + ++V++ ++ G ++G +A K EM
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSS----PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 64 RGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVC 123
G+ PD TF ++ L VCS ++ +L ++G + H++
Sbjct: 726 DGVLPDQATFVTV---------------------LRVCS---VLSSL-REGRAI--HSLI 758
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
+ + D ++ L+D Y + + ++FD M +V S+N LI GY K
Sbjct: 759 FHLAH---DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKN 812
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
++A+ + + M +++P+ +T+ + G++ D M + +
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 244 YNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+++ L +L +A+ + +P+ + ++ L+ G C+ D I +
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL-GACRIHGDDIRGEISAEKLIEL 931
Query: 303 IVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
++S + LL N + + +KA AL K RD
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 8/305 (2%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
++ +Y T + CK+G+V +AQ L +M + D +L ++ + +L
Sbjct: 536 DIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL 595
Query: 94 NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
N + LDV + ++++ K+G L E A+ M K + ++ I + + V K
Sbjct: 596 NVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVI--SSFVREGDVSK 653
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A + D++I GL + + LI Y + ++ EA L ++ P + + D
Sbjct: 654 AEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYL-AAGESKTPGKSVIRSMID 712
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQ 273
R G L DA+ +G P +T +I++ L + + + + E N++
Sbjct: 713 AYVRCGWLEDAYGLFMESAEKGCDPGAVT-ISILVNALTNRGKHREAEHISRTCLEKNIE 771
Query: 274 ----SYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
YN LI + G++ A IY+ M + +T+ +I+ + + Q DKAI +
Sbjct: 772 LDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEI 831
Query: 330 YKNNR 334
+ N R
Sbjct: 832 FSNAR 836
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 12/318 (3%)
Query: 25 LEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHAD 84
L A + P + ++I + G + A L E ++G P VT S L+ +
Sbjct: 694 LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRG 753
Query: 85 QWKEV----RLLLNEN-SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYT 139
+ +E R L +N LD +N ++ A+ + G L A + M GV + +Y
Sbjct: 754 KHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 140 ILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
++ Y ++DKA ++F +GL D Y +I Y K ++ EA++L +M K
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK 873
Query: 200 NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDK 258
+ P +Y + +C RL + L + R R DL+ Y +++ E +
Sbjct: 874 GIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE 932
Query: 259 ANKIFNSLIPEPNV----QSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
A K +L+ E + ++ L+S K G ++EA Y M I DS + ++
Sbjct: 933 AEKTI-TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTIL 991
Query: 315 NAFCKRKQCDKAIALYKN 332
+ +K I Y+
Sbjct: 992 KGYMTCGDAEKGILFYEK 1009
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 138/313 (44%), Gaps = 32/313 (10%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQW----- 86
+P++V+Y V+ + G + A++ EM++ G PD V +++ C +W
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTML---CTYARWGRHSA 241
Query: 87 --------KEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISY 138
+E R+LL+ +N ++ +L K+ + + EM++ GV P+ +Y
Sbjct: 242 MLTFYKAVQERRILLS-----TSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTY 296
Query: 139 TILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLT 198
T+++ Y + ++A K F M G VP+ +Y+ +I K ++A+ L EDM +
Sbjct: 297 TLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRS 356
Query: 199 KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE----- 253
+ +VP+ T + + P A + M R P D +I+ +
Sbjct: 357 QGIVPSNYTCATMLSLYYKTENYPKALSLFADME-RNKIPADEVIRGLIIRIYGKLGLFH 415
Query: 254 --QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFK 311
Q + + + N L E ++Y + + +G V +A+ + + M R+I +
Sbjct: 416 DAQSMFEETERLNLLADE---KTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYI 472
Query: 312 LLINAFCKRKQCD 324
+++ + K + D
Sbjct: 473 VMLQCYAKIQNVD 485
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 132 QPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMN 191
+P V+ YTI++ Y K+ A + F M+E G PD + ++ Y + R +
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCR---FGRLPDAWNFLTRMHYRGHRPPDLTPYNIIL 248
+ + + ++ + Y ++ L + G++ D W M G PP+ Y +++
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLW---LEMVEEG-VPPNEFTYTLVV 300
Query: 249 ETLCEQHL-DKANKIFN---SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIV 304
+ +Q ++A K F SL P +Y+ +IS K G ++A+ +Y++M + IV
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 305 RDSETFKLLINAFCKRKQCDKAIALYKN-NRDLCPFKILMDGL 346
+ T +++ + K + KA++L+ + R+ P ++ GL
Sbjct: 361 PSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 142/373 (38%), Gaps = 44/373 (11%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y ++S L K G I E+ + V PN Y V+ K G +A K E
Sbjct: 260 VYNFMLSSLQKKSFHGKVIDLWLEM-VEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGE 318
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
M G P+ VT+SS+I A W+ +A
Sbjct: 319 MKSLGFVPEEVTYSSVISLSVKAGDWE------------------------------KAI 348
Query: 121 AVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+ +M +G+ P + ++ Y KA LF M + D ++I+ Y
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
K+ +A ++ E+ NL+ + TY + G + A + + M R P
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTR-DIPLS 467
Query: 241 LTPYNIILETLCE-QHLDKANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMSIYQN 297
Y ++L+ + Q++D A + F +L P+ S N +++ Y + ++A +
Sbjct: 468 RFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQ 527
Query: 298 MCLRNIVRDSETFKLLINAFCKRKQCDKAI---------ALYKNNRDLCPFKILMDGLRK 348
+ + + D E +K + +CK +A A K+NR + M + K
Sbjct: 528 IMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNK 587
Query: 349 NGMEEVAQRVSQL 361
+ E VSQL
Sbjct: 588 HDKHEAVLNVSQL 600
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 153 KARKLFDMM-IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
+ R F M ++ P V Y I+++ Y ++ ++ A +ML P+AV +
Sbjct: 170 QVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTM 229
Query: 212 FDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLD-KANKIFNSLIPE- 269
R+GR F + R + YN +L +L ++ K ++ ++ E
Sbjct: 230 LCTYARWGRHSAMLTFYKAVQER-RILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 270 --PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAI 327
PN +Y +++S Y K G +EA+ + M V + T+ +I+ K +KAI
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 328 ALYKNNRD 335
LY++ R
Sbjct: 349 GLYEDMRS 356
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 56 KLCSEMIQRGIFPDVVTFSSLIYGFCHA---DQWKEV--RLLLNENSLDVCSFNIIMDAL 110
+L EM QRG+ + VT+++LI G A D +E+ ++ + D+ ++NI++D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 111 CKQGLLLEAHAVCY---------EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM 161
CK G L +A + +GV+P+V++YT ++ G+C K ++A LF M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 162 IEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRL 221
E G +PD +YN LI+ + + + L ++M + +A TY + D + GRL
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 222 PDAW 225
+
Sbjct: 181 DKGF 184
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK-- 182
EM +RG+ + ++YT L+ G D A+++F M+ G+ PD+ +YNIL+ G CK
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 183 -------IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+V++ +L + K + PN VTY + G C+ G +A+ +M G
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 236 HRPPDLTPYNIILETLCEQHLDKANKIFNS-LIPE-------PNVQSYNILISGYCKNGR 287
PD YN TL HL +K ++ LI E + +Y L++ +GR
Sbjct: 126 PL-PDSGTYN----TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGR 179
Query: 288 VDEA 291
+D+
Sbjct: 180 LDKG 183
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 42/193 (21%)
Query: 156 KLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGL 215
+LF M + GLV + +Y LIQG + D A + ++M++ + P+ +TY L DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 216 CRFGRL---------PDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
C+ G+L D W+ + +G +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVK----------------------------- 92
Query: 267 IPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
PNV +Y +ISG+CK G +EA ++++ M + DS T+ LI A + +
Sbjct: 93 ---PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 149
Query: 327 IALYKNNRDLCPF 339
L K R C F
Sbjct: 150 AELIKEMRS-CRF 161
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKA------- 54
Y TL+ GL ++ A + +E+ + V P+++ YN ++ GLCK+G + KA
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVS-DGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 55 ---QKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV----RLLLNENSL-DVCSFNII 106
CS + +G+ P+VVT++++I GFC +E R + + L D ++N +
Sbjct: 78 DGWDLFCS-LSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMD 143
+ A + G + + EM D +Y ++ D
Sbjct: 137 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 138/337 (40%), Gaps = 55/337 (16%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLI-----YGFCHADQWK 87
PN+ + N++ K + N +L + + GI PD +F +I +G +
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVE 128
Query: 88 EVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG----------------- 130
++ D N+IMD K + A V ++ +R
Sbjct: 129 KLGFFK-----DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 131 ----------VQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
+ DV+S+T+++ G+ ++ ARK FD M E +V S+N ++ GY
Sbjct: 184 EEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV----SWNAMLSGY 239
Query: 181 CKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPD 240
+ ++A+ L DML + PN T+ + C F P LTR +
Sbjct: 240 AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA-CSFRADPS----LTRSLVKLIDEKR 294
Query: 241 LTPYNIILETLCEQH-----LDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIY 295
+ + L + H + A +IFN L + N+ ++N +ISGY + G + A ++
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
M RN+V ++ LI + Q AI +++
Sbjct: 355 DTMPKRNVV----SWNSLIAGYAHNGQAALAIEFFED 387
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 160 MMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
++ ++ P+V+ N + + + K++ ++ + L E ++P+A ++ + RFG
Sbjct: 61 LIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFG 120
Query: 220 RLPDAWNFLTRMHYRGHRPPDLTPY--NIILETLCE-QHLDKANKIFNSLIPEPNVQSYN 276
L A + ++ + PY N+I++ + + ++ A K+F+ I + +N
Sbjct: 121 ILFQA--LVEKLGFFKD------PYVRNVIMDMYVKHESVESARKVFDQ-ISQRKGSDWN 171
Query: 277 ILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKN--NR 334
++ISGY K G +EA ++ M ++V ++ ++I F K K + A + +
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMPENDVV----SWTVMITGFAKVKDLENARKYFDRMPEK 227
Query: 335 DLCPFKILMDGLRKNGMEEVAQRV 358
+ + ++ G +NG E A R+
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRL 251
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH------ADQWK 87
NLV +N +I G + G ++ A++L M +R +VV+++SLI G+ H A ++
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 88 EVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG-VQPDVISYTILMDGYC 146
E + ++ D + ++ A C LE + I++ ++ + Y L+ Y
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSA-CGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+ +A+++FD M E DV SYN L + E +NL M + + P+ V
Sbjct: 445 RGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV 500
Query: 207 TYKYLFDGLCRFGRLPDA 224
TY + R G L +
Sbjct: 501 TYTSVLTACNRAGLLKEG 518
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 13/231 (5%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG--VQPDVISYTILMDGYCLK------C 149
+ V +N I+ C + L Y + R +PD+ +YT+L+ + C
Sbjct: 141 MSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVC 200
Query: 150 KV--DKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
V R L M G++PD + N++I+ Y K VDEA+ + ++M PNA T
Sbjct: 201 YVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYT 260
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLI 267
Y YL G+C GR+ F M +G P +I E+ LD+A ++ ++
Sbjct: 261 YSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML 320
Query: 268 P---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLIN 315
P++ +YN +++ C+ GR EA+ + + R+ V ++ L++
Sbjct: 321 ANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 17 NAIQTLQELEALQLVKPNLVIYNTVIHGLC-KDGLVNKAQKLCSEMIQRG-IFPDVVTFS 74
N ++TL E + ++ +YN +I C + L N+A + ++M++ PD+ T++
Sbjct: 125 NFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYT 184
Query: 75 -------------SLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
++ Y + HA + ++ N D N+I+ A K + EA
Sbjct: 185 LLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIR 244
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
V EM G +P+ +Y+ L+ G C K +V + + M G+VP+ Y +LI
Sbjct: 245 VFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLS 304
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
R+DEA+ + DML +L P+ +TY + LCR GR +A
Sbjct: 305 MERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEA 347
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 239 PDLTPYNIILETLCE-QHLDKANKIFNSLI---PEPNVQSYNILISGYCKNGRVDEAMSI 294
PD N+I++ + +D+A ++F + EPN +Y+ L+ G C+ GRV + +
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 295 YQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
Y+ M ++ +V + + +LI + ++ D+A+ +
Sbjct: 281 YKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEV 315
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 152/339 (44%), Gaps = 23/339 (6%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+S L ++ A+Q ++ + + P++ Y+ + L + GL+ + K+
Sbjct: 257 VYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIER 316
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAH 120
M Q+ P +T + W V D+ +N I++A C L +A
Sbjct: 317 MRQK---PTKLTKN------LRQKNWDPVL------EPDLVVYNAILNA-CVPTLQWKAV 360
Query: 121 AVCY-EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ + E+ K G++P+ +Y + M+ K D+ F M +G P +Y +L++
Sbjct: 361 SWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRA 420
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH-RP 238
+ +++EA+ DM K ++ Y L LC GR DA + RM + RP
Sbjct: 421 LWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRP 480
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIP--EPNVQSYNILISGYCKNGRVDEAMSIYQ 296
++T +I +L H+D IF + +PN+ + N+++ Y +N EA +++
Sbjct: 481 LEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFE 540
Query: 297 NMCLR---NIVRDSETFKLLINAFCKRKQCDKAIALYKN 332
+ R ++V + T+ ++ A + Q + +Y+
Sbjct: 541 EIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQT 579
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 52/264 (19%)
Query: 35 LVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN 94
+V + +++ K G +++A+ L M +R ++VT ++++ G+ + E L
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 95 ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
E +V S+ +++ ALC G +A + EM +R +V+S+ L+ G ++KA
Sbjct: 133 EMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKA 188
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
+++FD M DV S+N +I+GY + + ++EA L DM KN+ VT+ + G
Sbjct: 189 KQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYG 240
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQS 274
CR+G + +A+ CE +PE N+ S
Sbjct: 241 YCRYGDVREAYRL-----------------------FCE-------------MPERNIVS 264
Query: 275 YNILISGYCKNGRVDEAMSIYQNM 298
+ +ISG+ N EA+ ++ M
Sbjct: 265 WTAMISGFAWNELYREALMLFLEM 288
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 126/304 (41%), Gaps = 54/304 (17%)
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
+G L+ A + ++ +RG V+ +T L+ Y +D+AR LF++M E +V
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV---- 109
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA------- 224
+ N ++ GY K R++EA L +M N V++ + LC GR DA
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 225 -------WNFL------------TRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
WN L + + D+ +N +++ E + K+
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 266 LIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+ E NV ++ ++ GYC+ G V EA ++ M RNIV ++ +I+ F + +
Sbjct: 225 DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV----SWTAMISGFAWNELYRE 280
Query: 326 AIALY-----------KNNRDLCPFKILMDGL----RKNGMEEVAQRVSQLYGACDPDVA 370
A+ L+ N L GL R+ G + AQ +S + D D
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGR 340
Query: 371 LVRN 374
L ++
Sbjct: 341 LAKS 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 168/379 (44%), Gaps = 81/379 (21%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +++ LC S +A++ E+ + N+V +NT++ GL ++G + KA+++ M
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMP-----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHA 121
R DVV+++++I G+ D +E +LL + S
Sbjct: 196 PSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS------------------------ 227
Query: 122 VCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
+ +V+++T ++ GYC V +A +LF M E +V S+ +I G+
Sbjct: 228 ----------EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV----SWTAMISGFA 273
Query: 182 KIERVDEAMNLCEDML--TKNLVPNA---VTYKYLFDGL-CRFGRLPDAW------NFLT 229
E EA+ L +M + PN ++ Y GL F RL + N
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 230 RMHYRGHRPPDLTPYNIILETLCEQHLDKANKIF---NSLIPEP-NVQSYNILISGYCKN 285
+ + G L H+ ++ + SL+ E ++QS NI+I+ Y KN
Sbjct: 334 TVDHDGRLAKSLV------------HMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCPFKILM 343
G ++ A ++++ + + D ++ +I+ + + +A L++ +++D + +++
Sbjct: 382 GDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 344 DGLRKNGM-EEVAQRVSQL 361
GL +N + E A +S +
Sbjct: 439 SGLVQNELFAEAASLLSDM 457
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 30 LVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
+ + N+V + ++++G C+ G V +A +L EM +R ++V+++++I GF + ++E
Sbjct: 226 MSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREA 281
Query: 90 RLLLNENSLDVCSFN-----IIMDALCKQGLLLE----AHAVCYEMIKRGVQP------- 133
+L E DV + + +I A GL +E + ++I G +
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 134 -------------------------DVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
D+ S I+++ Y +++A LF+ + +
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS---LH 398
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
D S+ +I GY + V A L + + K + VT+ + GL + +A + L
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLL 454
Query: 229 TRMHYRGHRPPDLTPYNIILETL-CEQHLDKANKIF-----NSLIPEPNVQSYNILISGY 282
+ M G +P + T Y+++L + +LD+ I + +P++ N L+S Y
Sbjct: 455 SDMVRCGLKPLNST-YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRD 335
K G +++A I+ M + +D+ ++ +I DKA+ L+K D
Sbjct: 514 AKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 22/287 (7%)
Query: 54 AQKLCSEMIQRG---IFPDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDAL 110
++L +++I G + D SL++ + + + LLNE S D+ S NII++
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE-SFDLQSCNIIINRY 378
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
K G L A + +E +K D +S+T ++DGY V +A LF + + D
Sbjct: 379 LKNGDLERAETL-FERVKS--LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD----KDG 431
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL-- 228
++ ++I G + E EA +L DM+ L P TY L L +
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 229 ---TRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCK 284
T Y PDL N ++ + ++ A +IF ++ + V S+N +I G
Sbjct: 492 IAKTTACY----DPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTV-SWNSMIMGLSH 546
Query: 285 NGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+G D+A+++++ M +S TF +++A + + L+K
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK 593
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 135/337 (40%), Gaps = 47/337 (13%)
Query: 3 GTLMSGLCKSKGSGNAIQTLQEL--EALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
G L L S I + Q L E+ L N++I + K+G + +A+ L
Sbjct: 339 GRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYL-----KNGDLERAETLFER 393
Query: 61 MIQRGIFPDVVTFSSLIYGFCHA-DQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEA 119
+ D V+++S+I G+ A D + L + D ++ +++ L + L EA
Sbjct: 394 VKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEA 450
Query: 120 HAVCYEMIKRGVQPDVISYTILMD----------GYCLKCKVDKARKLFD---------- 159
++ +M++ G++P +Y++L+ G + C + K +D
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 160 -MMIEAGLVPDVW------------SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
M + G + D + S+N +I G D+A+NL ++ML PN+V
Sbjct: 511 SMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSV 570
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
T+ + G + M P + Y +++ L L +A + ++
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISA 630
Query: 266 LIPEPNVQSYNILISGYCK-NGRVDEAMSIYQNMCLR 301
L P+ Y L+ G C N R +A I + +R
Sbjct: 631 LPFTPDHTVYGALL-GLCGLNWRDKDAEGIAERAAMR 666
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 21/269 (7%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE--- 95
+T+I + + + A K+ EM + G VV+F++L+ H+D ++ V L +E
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 96 --NSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKV 151
N++ D S+ +++ + C G +A + +M +GV+ +I++T ++ V
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 152 DKARKLFDMMIEAGLVPDVWSYNILIQGYCK--IERVDEAMNLCEDMLTKNLVPNAVTYK 209
D+A L+ M+ G D YN+ + K ERV E L E+M + L P+ V+Y
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKE---LMEEMSSVGLKPDTVSYN 282
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIF--NSL 266
YL C G + +A + Y G P+ + ++ LC L D+ +F +++
Sbjct: 283 YLMTAYCVKGMMSEA-----KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAI 337
Query: 267 IPE-PNVQSYNILISGYCKNGRVDEAMSI 294
+ + P+ ++ L G KN R+++A +
Sbjct: 338 VHKIPDFKTCKHLTEGLVKNNRMEDARGV 366
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG L+ C S A++ ++++E ++ V+ ++ + T++ L K+GLV++A+ L EM
Sbjct: 177 YGMLIKSYCDSGKPEKAMEIMRDME-VKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEM 235
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL-----DVCSFNIIMDALCKQGLL 116
+ +G D ++ + + + V+ L+ E S D S+N +M A C +G++
Sbjct: 236 VNKGCDLDNTVYNVRLMN-AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMM 294
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
EA V YE ++ QP+ ++ L+ C+ D+ +F +PD + L
Sbjct: 295 SEAKKV-YEGLE---QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHL 350
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+G K R+++A + ++ K P VT
Sbjct: 351 TEGLVKNNRMEDARGVAR-IVKKKFPPRLVT 380
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 31/195 (15%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEM-IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
V+ LC +G + +A++L EM + +G+ ++VTF S+I C +W
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIG--CCVKRW----------- 260
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
D ++++ + K+ ++L D+ SY +L+DG+ KV++A +L
Sbjct: 261 -DFEELDLVLKLMEKESVML----------------DLDSYKVLIDGFTSYGKVEEAERL 303
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
MM + L + + YN+++ GY + V++ + L +M ++ + PN TY L +GLC+
Sbjct: 304 VLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCK 363
Query: 218 FGRLPDAWNFLTRMH 232
G++ +A +FL +
Sbjct: 364 AGKVCEAMSFLNELR 378
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 38/243 (15%)
Query: 92 LLNENSLDVC---SFNIIMDALCKQGLLLEAHAVCYEM-IKRGVQPDVISYTILMDGYCL 147
L+ E+ +DV S +++ LC G + A + EM + +GV+ +++++ ++ G C+
Sbjct: 199 LMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCV 257
Query: 148 K-CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
K ++ + +M + ++ D+ SY +LI G+ +V+EA L M K L +
Sbjct: 258 KRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESY 317
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL 266
Y + +G RFG + + M RG
Sbjct: 318 LYNLIMNGYSRFGLVEKVIELYSEMSSRG------------------------------- 346
Query: 267 IPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKA 326
PN +Y +L++G CK G+V EAMS + + D E + L + DK+
Sbjct: 347 -VTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKS 405
Query: 327 IAL 329
+ +
Sbjct: 406 LEV 408
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+++ LC + A + ++E+ ++ VK N+V + ++I K + + M +
Sbjct: 216 VVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKE 275
Query: 65 GIFPDVVTFSSLIYGFCHADQWKEVR---LLLNENSLDVCSF--NIIMDALCKQGLLLEA 119
+ D+ ++ LI GF + +E L++++ L V S+ N+IM+ + GL+ +
Sbjct: 276 SVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKV 335
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
+ EM RGV P+ +Y +LM+G C KV +A + + D Y+ L +
Sbjct: 336 IELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEE 395
Query: 180 YCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPP 239
++ +D+++ + +M+ +P A + L D L R +A +T + G +P
Sbjct: 396 CYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLITIVVKCGIKPK 454
Query: 240 DLTPYNI 246
+ Y +
Sbjct: 455 SCSQYGL 461
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 150 KVDKARKLFDMMIEAGL-VPDVWSYNILIQGYCKIERVDEAMNLCEDM-LTKNLVPNAVT 207
+++ AR F +M+E+G+ V V+S +++ C + A L E+M L K + N VT
Sbjct: 189 QMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVT 248
Query: 208 YKYLFDGLCRFGRLPDAWNF-----LTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANK 261
+K + G C W+F + ++ + DL Y ++++ +++A +
Sbjct: 249 FKSMI-GCC-----VKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAER 302
Query: 262 IFNSLIPEP-NVQSY--NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+ + + V+SY N++++GY + G V++ + +Y M R + + +T+ +L+N C
Sbjct: 303 LVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLC 362
Query: 319 KRKQCDKAIALYKNNR 334
K + +A++ R
Sbjct: 363 KAGKVCEAMSFLNELR 378
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 42/299 (14%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
Y +I L K G ++ A KL +M +R + P FSSL+
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV-------------------- 355
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
D++ K G L + V EM G +P + L+D Y K+D A +L
Sbjct: 356 ----------DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
+D M ++G P+ Y ++I+ + K +++ AM + +DM +P TY L +
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIFNSLIPEPNVQSYN 276
G++ A M G R P L+ Y +L L + L D A KI + E Y+
Sbjct: 466 SGQVDSAMKIYNSMTNAGLR-PGLSSYISLLTLLANKRLVDVAGKI----LLEMKAMGYS 520
Query: 277 I------LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ ++ Y K+ VD A+ + M I ++ + L + K D A L
Sbjct: 521 VDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPL 579
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 5/250 (2%)
Query: 94 NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDK 153
+ L ++N ++ L K L A + + G + D +Y LM + K K
Sbjct: 237 SHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYK 296
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A ++++ M + + D +Y ++I K R+D A L + M + L P+ + L D
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE---P 270
+ + GRL + M GHRP ++I LD A ++++ + P
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRP 416
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
N Y ++I + K+G+++ AM+++++M + T+ L+ Q D A+ +Y
Sbjct: 417 NFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Query: 331 KN--NRDLCP 338
+ N L P
Sbjct: 477 NSMTNAGLRP 486
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 98 LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKL 157
LD ++ +I+ +L K G L A + +M +R ++P ++ L+D ++D + K+
Sbjct: 311 LDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 370
Query: 158 FDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCR 217
+ M G P + LI Y K ++D A+ L ++M PN Y + + +
Sbjct: 371 YMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 218 FGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIFNSLIP---EPNVQ 273
G+L A M G P T Y+ +LE +D A KI+NS+ P +
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPST-YSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLS 489
Query: 274 SYNILISGYCKNGRVDEAMSIYQNM 298
SY L++ VD A I M
Sbjct: 490 SYISLLTLLANKRLVDVAGKILLEM 514
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 67/351 (19%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGF--CHADQW 86
+L N V +NT+I G K +N+A+KL M +R DVVT++++I G+ C ++
Sbjct: 65 KLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISGYVSCGGIRF 120
Query: 87 -KEVRLLLNE-NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDG 144
+E R L +E S D S+N ++ K + EA + +M +R + +S++ ++ G
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITG 176
Query: 145 YCLKCKVDKARKLFDMM----------IEAGLVPD-----------------------VW 171
+C +VD A LF M + AGL+ + V+
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 172 SYNILIQGYCKIERVDEAM-------NLCED----MLTKNLVPNAVTYKYLFDGLCRFGR 220
+YN LI GY + +V+ A +LC D + N V++ + + G
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 221 LPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILI 279
+ A R+ + + D +N +++ ++ A +F S +P + S+N+++
Sbjct: 297 VVSA-----RLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF-SEMPNRDAHSWNMMV 350
Query: 280 SGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
SGY G V+ A ++ ++ V ++ +I A+ K K +A+ L+
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTV----SWNSIIAAYEKNKDYKEAVDLF 397
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 153/348 (43%), Gaps = 38/348 (10%)
Query: 4 TLMSGLCKSKGSGNAIQTLQELEALQLVKPNLV-IYNTVIHGLCKDGLVNKAQKLCSEMI 62
L++GL K++ A L + +L + +LV YNT+I G + G V A+ L ++
Sbjct: 203 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP 262
Query: 63 ------QRGIF-----PDVVTFSSLIYGFCHADQWKEVRLLLNE-NSLDVCSFNIIMDAL 110
G F +VV+++S+I + RLL ++ D S+N ++D
Sbjct: 263 DLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGY 322
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
+ +A A+ EM R D S+ +++ GY V+ AR F+ E V
Sbjct: 323 VHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV--- 375
Query: 171 WSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
S+N +I Y K + EA++L M + P+ T L L R
Sbjct: 376 -SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL--------R 426
Query: 231 MHYRGHRP------PDLTPYN--IILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGY 282
+ + H+ PD+ +N I + + C + ++ + +IF+ + + V ++N +I GY
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIME-SRRIFDEMKLKREVITWNAMIGGY 485
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+G EA++++ +M I TF ++NA D+A A +
Sbjct: 486 AFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQF 533
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 137/331 (41%), Gaps = 95/331 (28%)
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL 166
++ + + G + EA + ++ R + +++ ++ GY + ++++ARKLFD+M + +
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 167 VP------------------------------DVWSYNILIQGYCKIERVDEAMNLCEDM 196
V D +S+N +I GY K R+ EA+ L E M
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM 162
Query: 197 LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QH 255
+ NAV++ + G C+ G + A +M + D +P ++ L + +
Sbjct: 163 PER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVK-----DSSPLCALVAGLIKNER 213
Query: 256 LDKANKI---FNSLIP--EPNVQSYNILISGYCKNGRVDEAMSIY--------------- 295
L +A + + SL+ E V +YN LI GY + G+V+ A ++
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 296 -QNMCLRNIV---------------------------RDSETFKLLINAFCKRKQCDKAI 327
+ C +N+V RD+ ++ +I+ + + + A
Sbjct: 274 RERFC-KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAF 332
Query: 328 ALYKN--NRDLCPFKILMDGLRKNGMEEVAQ 356
AL+ NRD + +++ G G E+A+
Sbjct: 333 ALFSEMPNRDAHSWNMMVSGYASVGNVELAR 363
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 44/301 (14%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
N+V +N++I K G V A+ L +M R D ++++++I G+ H + ++ L
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALF 335
Query: 94 NE-NSLDVCSFNIIMDALCKQGLLL----------EAHAVCYEMIK-------------- 128
+E + D S+N+++ G + E H V + I
Sbjct: 336 SEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 129 -------RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYC 181
G +PD + T L+ + ++ ++++ ++PDV +N LI Y
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYS 454
Query: 182 KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDL 241
+ + E+ + ++M K V +T+ + G G +A N M G P +
Sbjct: 455 RCGEIMESRRIFDEMKLKREV---ITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 242 TPYNIILETLCEQHLDKANKIFNSLIP----EPNVQSYNILISGYCKNGRVDEAMSIYQN 297
T +++ +D+A F S++ EP ++ Y+ L++ G+ +EAM I +
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITS 571
Query: 298 M 298
M
Sbjct: 572 M 572
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 27/289 (9%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
++ KP++ I N V+ G + K L +EM +RG+ PD TF + + C +W+
Sbjct: 71 EIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTF-TFVLKACSKLEWRS 129
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVC------YEMIKRGVQPDVISYTILM 142
+ V +++ K L+L HA C E+ + ++++ +
Sbjct: 130 NGFAFHGK---VVRHGFVLNEYVKNALIL-FHANCGDLGIASELFDDSAKAHKVAWSSMT 185
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
GY + K+D+A +LFD M D ++N++I G K + +D A L + K++
Sbjct: 186 SGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDV- 240
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
VT+ + G G +A M G P +T +++ L+ ++
Sbjct: 241 ---VTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 263 FNSLIPEPNVQS--------YNILISGYCKNGRVDEAMSIYQNMCLRNI 303
++ +V S +N LI Y K G +D A+ +++ + R++
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 32/326 (9%)
Query: 16 GNAIQTLQELEALQL---VKPN--LVIYNTVIHGLCKDGLVNKAQKLCSEMI-QRGIFPD 69
GN + LQ +E LQ K N +IY T ++ L K +A + M+ Q +PD
Sbjct: 483 GNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPD 542
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNE-----------NSL---------DVCSFNIIMDA 109
+V + S+ A KE+ +++ +L DV +N +++A
Sbjct: 543 MVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNA 602
Query: 110 LCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC-KVDKARKLFDMMIEAGLVP 168
++ A V ++ +RG +P ++Y ++M+ L C K + + F M ++ +P
Sbjct: 603 CVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME-VMLACEKYNLVHEFFRKMQKSS-IP 660
Query: 169 DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL 228
+ +Y +L+ K + DEA++ EDM ++ +V +A Y L LC GR + N L
Sbjct: 661 NALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNML 720
Query: 229 TRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSL--IPEPNVQSYNILISGYCKNG 286
++ ++P +T +I + ++ A IF+ + + PN+ + NI++ Y + G
Sbjct: 721 KKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGG 780
Query: 287 RVDEAMSIYQNMCLR-NIVRDSETFK 311
+EA ++Q M N +++S F+
Sbjct: 781 LFEEARELFQKMSEDGNHIKNSSDFE 806
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 33 PNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLL 92
PN + Y +++ L K+G ++A +M RGI + L C A + E +
Sbjct: 660 PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNM 719
Query: 93 LNE-----NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
L + N V ++ ++ A G + A A ++ +K+ P++++ I++ Y
Sbjct: 720 LKKICRVANKPLVVTYTGLIQACVDSGNIKNA-AYIFDQMKKVCSPNLVTCNIMLKAYLQ 778
Query: 148 KCKVDKARKLFDMMIEAG------------LVPDVWSYNILIQGYCKIERVDEAMNLCED 195
++AR+LF M E G ++PD +++N ++ + E+ D+ +
Sbjct: 779 GGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYRE 838
Query: 196 MLTKNLVPNAVTYKYLFDGLCRFGR---LPDAWNFLTR 230
ML NA + + R G+ + W + R
Sbjct: 839 MLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRR 876
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 201 LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL--CEQHLDK 258
L P+ V Y + + + + A+ L ++ RG +P +T Y +I+E + CE++ +
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVT-YGLIMEVMLACEKY-NL 646
Query: 259 ANKIFNSLIPE--PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
++ F + PN +Y +L++ K G+ DEA+ ++M R IV + + L
Sbjct: 647 VHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARC 706
Query: 317 FCKRKQCDKAIALYK 331
C +C++ + + K
Sbjct: 707 LCSAGRCNEGLNMLK 721
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 157/369 (42%), Gaps = 31/369 (8%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
YG ++SG A+ E+E++ L +N +I GL ++ + EM
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMESI-----GLSTWNAMISGLMQNNHHEEVINSFREM 357
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWK---EVRLLLNENSLD--VCSFNIIMDALCKQGLL 116
I+ G P+ VT SSL+ ++ K E+ N D + I+D K G L
Sbjct: 358 IRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFL 417
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
L A V R +I++T ++ Y + D A LFD M G PD + +
Sbjct: 418 LGAQRVFDNCKDR----SLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 177 IQGYCKIERVDEAMNLCEDMLTK-NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+ + D A ++ + MLTK ++ P Y + L R G+L DA F+++M
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPI-- 531
Query: 236 HRPPDLTPYNIIL---ETLCEQHLDK--ANKIFNSLIPEPNVQSYNILISGYCKNGRVDE 290
P + +L L + + + +++F + PE N +Y I+ + Y + GR +E
Sbjct: 532 --DPIAKVWGALLNGASVLGDLEIARFACDRLFE-MEPE-NTGNYTIMANLYTQAGRWEE 587
Query: 291 AMSIYQNM---CLRNIVRDS--ETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDG 345
A + M L+ I S ET K L + K C+++ +Y+ L +
Sbjct: 588 AEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Query: 346 LRKNGMEEV 354
+RK ++E
Sbjct: 648 IRKQELDEA 656
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 126 MIKRGVQPDVISYTILMDGYCLKC-KVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
+I+ G DV ++ Y KC ++ ARK+FD M E DV S+N +I GY +
Sbjct: 158 VIRGGFDSDVFVGNGMIT-YYTKCDNIESARKVFDEMSE----RDVVSWNSMISGYSQSG 212
Query: 185 RVDEAMNLCEDMLT-KNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
++ + + ML + PN VT +F + L +M H DL+
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM-IENHIQMDLSL 271
Query: 244 YNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
N ++ + LD A +F+ + E + +Y +ISGY +G V EAM+++ M
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEM-SEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 144/341 (42%), Gaps = 42/341 (12%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
Y +I + L +L + ++ I PD S LI + D++++ + +E +
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT 84
Query: 98 L-DVCSFNIIMDALCKQGLLLEAHAV--------CYEMIKRGVQPDVISYTILM------ 142
+ + S+N ++ A + + +A ++ CY +PD IS + ++
Sbjct: 85 VRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYS--SDAARPDSISISCVLKALSGC 142
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
D + L AR++ +I G DV+ N +I Y K + ++ A + ++M +++
Sbjct: 143 DDFWLGSL---ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV- 198
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
V++ + G + G D +M+ D P + + ++ + ++ I
Sbjct: 199 ---VSWNSMISGYSQSGSFEDC----KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI 251
Query: 263 FNSLIPEPNVQSY--------NILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLI 314
F + + ++++ N +I Y K G +D A +++ M +DS T+ +I
Sbjct: 252 FGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS----EKDSVTYGAII 307
Query: 315 NAFCKRKQCDKAIALYKNNRD--LCPFKILMDGLRKNGMEE 353
+ + +A+AL+ L + ++ GL +N E
Sbjct: 308 SGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
L A M + G+ P V+ YT L+DGY + ++DKA+++F M G +P+V++YN +
Sbjct: 706 LAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 765
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
I+G C EA L ++M ++ PN V Y L L + G+L +A + M +GH
Sbjct: 766 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGH 825
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 10/126 (7%)
Query: 14 GSGN----AIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD 69
G GN A+ TL ++ + + P+++ Y T+I G G ++KA+++ EM +G P+
Sbjct: 700 GKGNKPLAALTTLNHMKEVG-IDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPN 758
Query: 70 VVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDA-----LCKQGLLLEAHAVCY 124
V T++S+I G C A +++E LL E C+ N ++ + L K G L EA V
Sbjct: 759 VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIK 818
Query: 125 EMIKRG 130
EM+K+G
Sbjct: 819 EMVKKG 824
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 154 ARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFD 213
A + M E G+ P V Y LI GY +D+A + +M K +PN TY +
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 214 GLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI 262
GLC G +A L M RG P N ++ + +L KA K+
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNP------NFVVYSTLVGYLRKAGKL 810
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 146/311 (46%), Gaps = 21/311 (6%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ +++ GL K+ +A + E+ + +L+ +NT++ G + ++KA +L +M
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMP-----QRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENSL---DVCSFNIIMDALCKQGLLLE 118
+R + V++S+++ G+ A + R++ ++ L +V ++ II+ ++GLL E
Sbjct: 243 PER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKE 298
Query: 119 AHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
A + +M+ G++ D + ++ + ++ ++ + L + + N L+
Sbjct: 299 ADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
Y K + +A ++ D+ K+LV ++ + GL G +A +RM G RP
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGLGVHGHGKEAIELFSRMRREGIRP 414
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSI 294
+T ++ +D+ F S+ P V+ Y L+ + GR+ EA+ +
Sbjct: 415 DKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKV 474
Query: 295 YQNMCLR-NIV 304
Q M + N+V
Sbjct: 475 VQTMPMEPNVV 485
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 24/267 (8%)
Query: 51 VNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-NSLDVCSFNIIMD- 108
V A KL +M +R D V+++S++ G A + ++ R L +E D+ S+N ++D
Sbjct: 170 VRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDG 225
Query: 109 -ALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLV 167
A C++ + +E+ ++ + + +S++ ++ GY ++ AR +FD M
Sbjct: 226 YARCRE------MSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA-- 277
Query: 168 PDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNF 227
+V ++ I+I GY + + EA L + M+ L +A + G L +
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLL----SL 333
Query: 228 LTRMHY---RGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYC 283
R+H R + + N +L+ + +L KA +FN IP+ ++ S+N ++ G
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND-IPKKDLVSWNTMLHGLG 392
Query: 284 KNGRVDEAMSIYQNMCLRNIVRDSETF 310
+G EA+ ++ M I D TF
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 152/334 (45%), Gaps = 26/334 (7%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
Q+ +PN+ + N++I ++ +A + SEM + G+F D T+ L+ C W
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA-CSGQSWLP 134
Query: 89 VRLLLNEN------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
V +++ + S D+ N ++D + G L A+ ++ ++ + D +S+ ++
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAM--KLFEKMSERDTVSWNSML 192
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
G ++ AR+LFD M + L+ S+N ++ GY + + +A L E M +
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLI----SWNTMLDGYARCREMSKAFELFEKMPER--- 245
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK-ANK 261
N V++ + G + G + A +M ++ + II+ E+ L K A++
Sbjct: 246 -NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK---NVVTWTIIIAGYAEKGLLKEADR 301
Query: 262 IFNSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFC 318
+ + ++ + + +++ ++G + M I+ + N+ ++ L++ +
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYA 361
Query: 319 KRKQCDKAIALYKN--NRDLCPFKILMDGLRKNG 350
K KA ++ + +DL + ++ GL +G
Sbjct: 362 KCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T++ G K+ G+ + + L N+V + +I G + GL+ +A +L +M
Sbjct: 250 WSTMVMGYSKA---GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWK---EVRLLLNENSLDVCSF--NIIMDALCKQGLL 116
+ G+ D S++ + + +L ++L ++ N ++D K G L
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+A V ++ K+ D++S+ ++ G + +A +LF M G+ PD ++ +
Sbjct: 367 KKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 177 IQGYCKIERVDEAMNLCEDM-LTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRG 235
+ +DE ++ M +LVP Y L D L R GRL +A + M
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME- 481
Query: 236 HRPPDLTPYNIILETLCEQH--LDKANKIFNSLI 267
P++ + +L C H +D A ++ ++L+
Sbjct: 482 ---PNVVIWGALLGA-CRMHNEVDIAKEVLDNLV 511
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV-- 89
K +LV +NT++HGL G +A +L S M + GI PD VTF +++ HA E
Sbjct: 378 KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGID 437
Query: 90 RLLLNENSLD----VCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
E D V + ++D L + G L EA V M ++P+V+ + L+
Sbjct: 438 YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGAC 494
Query: 146 CLKCKVDKARKLFDMMIEAGLVP-DVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL-VP 203
+ +VD A+++ D +++ L P D +Y++L Y E + ++ M + + P
Sbjct: 495 RMHNEVDIAKEVLDNLVK--LDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKP 552
Query: 204 NAVTYKYLFDGLCRF 218
+ + L DG+ F
Sbjct: 553 SGASSVELEDGIHEF 567
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 148/338 (43%), Gaps = 62/338 (18%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL----------IYGF-CH 82
++V +N +I L + G KA + M+ G P T +S+ ++G CH
Sbjct: 102 DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCH 161
Query: 83 ADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
V+ L++N + N ++ K G +++ +E + QP+ +SYT ++
Sbjct: 162 G---VAVKTGLDKN---IFVGNALLSMYAKCGFIVDYGVRVFESLS---QPNEVSYTAVI 212
Query: 143 DGYCLKCKVDKARKLFDMMIEAGL----------------------VPDVWSYNILIQGY 180
G + KV +A ++F +M E G+ + +++ + Q +
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 181 C------------------KIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLP 222
C +I ++ MN E + + N V++ + G + R
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 223 DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISGY 282
+ FLTRM G +P ++T +++ ++ +IF+S IP+P+V ++N ++SGY
Sbjct: 333 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS-IPQPSVSAWNAMLSGY 391
Query: 283 CKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+EA+S ++ M +N+ D T +++++ C R
Sbjct: 392 SNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS-CAR 428
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 12/268 (4%)
Query: 69 DVVTFSSLIYGFCHADQWKEVRLLLN--ENSLDVC----SFNIIMDALCKQGLLLEAHAV 122
D+ ++S+I GF H + +L + +C SF ++ + + LL
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 123 CYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCK 182
++K G D T L D YC ++D AR+ FD ++ V +W N +I GY
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV--IW--NEMIHGYGH 597
Query: 183 IERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLT 242
R DEA+ L M++ P+ +T+ + G + L+ M P+L
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELD 657
Query: 243 PYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
Y I++ L L+ A K+ + + + + IL+S +G V A + + + +R
Sbjct: 658 HYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL-MR 716
Query: 302 NIVRDSETFKLLINAFCKRKQCDKAIAL 329
+ S + LL N + +Q D + AL
Sbjct: 717 LDPQSSAAYVLLSNTYSSLRQWDDSAAL 744
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 139/343 (40%), Gaps = 61/343 (17%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL------------ 76
L +PN V Y VI GL ++ V +A ++ M ++G+ D V S++
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 77 ---IYGFCHADQWKEVRLLLN-------ENSL-----------------------DVCSF 103
IYG Q + L L NSL +V S+
Sbjct: 259 LSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 104 NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC-KVDKARKLFDMMI 162
NI++ ++ ++ M G QP+ ++ I + G C + V+ R++F +
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT-CISVLGACFRSGDVETGRRIFSSIP 377
Query: 163 EAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF---- 218
+ P V ++N ++ GY E +EA++ M +NL P+ T + R
Sbjct: 378 Q----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLE 433
Query: 219 -GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNI 277
G+ T + H L I + + CE+ ++ + IF+ I E ++ +N
Sbjct: 434 GGKQIHGVVIRTEISKNSHIVSGL----IAVYSECEK-MEISECIFDDCINELDIACWNS 488
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+ISG+ N +A+ +++ M ++ +ET + + C R
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 119/255 (46%), Gaps = 14/255 (5%)
Query: 50 LVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV----RLLLNENSL-DVCSFN 104
L++ A+KL + R +VV +++LI GF ++ E R +L E+ L + C+
Sbjct: 261 LLDNARKLFETSVDR----NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLA 316
Query: 105 IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEA 164
I+ + G L +V MI+ G++ D +++T +D Y + AR +FDMM E
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 165 GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDA 224
++ S++ +I + +EA++ M ++N+VPN+VT+ L G + +
Sbjct: 377 NVI----SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Query: 225 WNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYC 283
W M P+ Y +++ L + +A +++ +P ++ L+S
Sbjct: 433 WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACR 492
Query: 284 KNGRVDEAMSIYQNM 298
+ VD A I + +
Sbjct: 493 IHKEVDLAGEIAEKL 507
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 105 IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEA 164
I+M CKQ +AH + EMI G + YT L+ Y + D A L + M +
Sbjct: 157 IVMLGKCKQPE--KAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSS 214
Query: 165 -GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPD 223
PDV +Y+ILI+ + ++ D+ +L DM + + PN +TY L D + +
Sbjct: 215 HNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVE 274
Query: 224 AWNFLTRMHYRGHRPPDLTPYNIILETLCE----QHLDKANKIFNSLIPEPNVQSYNILI 279
+ L +M PD N L + ++ + F S EPN++++NIL+
Sbjct: 275 MESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILL 334
Query: 280 SGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCK 319
Y K+G + ++ + M + T+ ++I+AF +
Sbjct: 335 DSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 157/370 (42%), Gaps = 27/370 (7%)
Query: 17 NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSL 76
+AIQ + L KPN+ IY +I L K KA +L EMI G + +++L
Sbjct: 132 SAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTAL 191
Query: 77 IYGFCHADQWKEVRLLLNENSL------DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG 130
+ + + ++ LL DV +++I++ + + + + +M ++G
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251
Query: 131 VQPDVISYTILMDGYC-LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEA 189
++P+ I+Y L+D Y K V+ L M+ E PD W+ N ++ + +++
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 190 MNLCEDMLTKNLVPNAVTYKYLFDGLCRFG---RLPDAWNFLTRMHYRGHRPPDLTPYNI 246
N E + + PN T+ L D + G ++ ++ + HY + YN+
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSW----TIVTYNV 367
Query: 247 ILETLCEQ-HLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN 302
+++ L + +F + E P+ + L+ Y + + D+ + + + +
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 303 IVRDSETFKLLINAFCKRKQCD--KAIALYKNNRDLCPFKI----LMDGLRKNGMEEVAQ 356
I D F L++A+ + ++ K + + P KI ++ R +GM
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM---TT 484
Query: 357 RVSQLYGACD 366
V +L+G +
Sbjct: 485 HVKELHGVVE 494
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y L+S +S A L+ +++ +P++ Y+ +I + +K Q L S+
Sbjct: 187 VYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD 246
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVR----LLLNEN--SLDVCSFNIIMDALCKQG 114
M ++GI P+ +T+++LI + A + E+ +L E+ D + N + A G
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNG 306
Query: 115 LLLEAHAVCYEMIK-RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSY 173
+E CYE + G++P++ ++ IL+D Y K + + M + + +Y
Sbjct: 307 -QIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY 365
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
N++I + + + + L M ++ + P+ VT
Sbjct: 366 NVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVT 399
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 93/215 (43%), Gaps = 5/215 (2%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y TL+ K+K TL ++ KP+ N+ + +G + + +
Sbjct: 259 YNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF 318
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLN-----ENSLDVCSFNIIMDALCKQGLL 116
GI P++ TF+ L+ + + +K++ ++ S + ++N+++DA + G L
Sbjct: 319 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 378
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
+ + M + P ++ L+ Y K DK + + + + D+ +N L
Sbjct: 379 KQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL 438
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYL 211
+ Y ++E+ E + E M K P+ +TY+ +
Sbjct: 439 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTM 473
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
+V YN VI + G + + + L M IFP VT SL+ + A + ++ +L
Sbjct: 361 TIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVL 420
Query: 94 N--ENS---LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
ENS LD+ FN ++DA + E V M K+G +PD I+Y ++ Y +
Sbjct: 421 RFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRIS 480
Query: 149 CKVDKARKLFDMMIEAG 165
++L ++ G
Sbjct: 481 GMTTHVKELHGVVESVG 497
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 152 DKARKLFDMMIEA-GLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKY 210
+ A ++F+++ E P+V Y LI K ++ ++A L ++M+ + V N Y
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 211 LFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-LDKANKIFNSLIPE 269
L R GR A+ L RM + PD+ Y+I++++ + DK + + + +
Sbjct: 191 LVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQ 250
Query: 270 ---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVR-DSETFKLLINAFCKRKQCDK 325
PN +YN LI Y K E S M + + DS T + AF Q +
Sbjct: 251 GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEM 310
Query: 326 AIALYKNNR------DLCPFKILMDGLRKNG 350
Y+ + ++ F IL+D K+G
Sbjct: 311 MENCYEKFQSSGIEPNIRTFNILLDSYGKSG 341
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVIS------YTILMDGYCLKCKVD 152
D + I+ ALC +G + A V + DVIS Y L+ G+ ++ V
Sbjct: 172 DGFTVTAIISALCSRGHVKRALGVMHH------HKDVISGNELSVYRSLLFGWSVQRNVK 225
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCK--IER-----VDEAMNLCEDMLTKNLVPNA 205
+AR++ M AG+ PD++ +N L+ C+ + R V EA+N+ +M + + P +
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTS 285
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNS 265
++Y L L R R+ ++ L +M G P + Y ++ K N+I +
Sbjct: 286 MSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDE 345
Query: 266 LIPE---PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQ 322
+I P + Y LI C RV+ A+ +++ M ++ + + LLI CK
Sbjct: 346 MIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGN 405
Query: 323 CDKAIALYK 331
+K L++
Sbjct: 406 FEKGRELWE 414
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 35 LVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE------ 88
L +Y +++ G V +A+++ +M GI PD+ F+SL+ C + +
Sbjct: 208 LSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVP 267
Query: 89 --VRLLLNENSLDV----CSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ ++L S + S+NI++ L + + E+ + +M + G PD SY ++
Sbjct: 268 EALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVV 327
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
L + K ++ D MIE G P+ Y LI C +ERV+ A+ L E M ++
Sbjct: 328 RVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVG 387
Query: 203 PNAVTYKYLFDGLCRFG 219
Y L LC+ G
Sbjct: 388 GYGQVYDLLIPKLCKGG 404
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 163/363 (44%), Gaps = 33/363 (9%)
Query: 10 CKSKGSGNAIQTLQELEALQL-VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFP 68
C++ GN I L AL+ ++ + ++IH + V A+ L EM R
Sbjct: 163 CRTVIDGNKIHCL----ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR---- 214
Query: 69 DVVTFSSLIYGFCHADQWKEVRLLLNE-NSLDVCSFNIIMDALCKQGLLLEAHAVCYEMI 127
D+ +++++I G+C + KE L N ++D + ++ A + G + I
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 128 KRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVD 187
K G++ ++ L+D Y ++ +K+FD M V D+ S+N +I+ Y E+
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQPL 330
Query: 188 EAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNII 247
A++L ++M + P+ +T L L + G + + +G D+T N +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 248 LETLCEQHL-DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRN-IVR 305
+ + L D A +FN L P +V S+N +ISGY +NG EA+ +Y M I
Sbjct: 391 VVMYAKLGLVDSARAVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 306 DSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKILMDGLRKNGME---EVAQRVSQLY 362
+ T+ ++ A C +A AL + + L L KNG+ V ++ +Y
Sbjct: 450 NQGTWVSVLPA------CSQAGALRQGMK-------LHGRLLKNGLYLDVFVVTSLADMY 496
Query: 363 GAC 365
G C
Sbjct: 497 GKC 499
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 45/307 (14%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
+ T++SG ++ + AI+ +E + N + +V+ + G + + KL +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 62 IQRGIFPDVVTFSSL--IYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEA 119
++ G++ DV +SL +YG C + + L ++ +N ++ G +A
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLE-DALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 120 HAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMM-IEAGLVPDVWSYNILIQ 178
+ EM+ GV+PD I++ L+ VD+ + F+MM + G+ P + Y ++
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 596
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
Y + +++ A+ + M +L P+A + L CR
Sbjct: 597 MYGRAGQLETALKFIKSM---SLQPDASIWGALLSA-CR--------------------- 631
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILISG-YCKNGR---VDEAMSI 294
N+ L + +HL + EP Y++L+S Y G+ VDE SI
Sbjct: 632 ---VHGNVDLGKIASEHLFEV---------EPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 295 YQNMCLR 301
LR
Sbjct: 680 AHGKGLR 686
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 20/280 (7%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR-GIFPDVVTFSSLI-----YGFCHADQWK 87
++V +N++I K G A ++ S M G PD +T +++ G +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 88 EVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ +E ++ N ++D K G++ EA+ V M + DV+S+ ++ GY
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQ 307
Query: 148 KCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVT 207
+ + A +LF+ M E + DV +++ I GY + EA+ +C ML+ + PN VT
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 208 YKYLFDGLCRFGRLPD-------AWNFLTRMHYRGHRPPDLTPYNII-LETLCEQHLDKA 259
+ G G L A + + GH ++ +I + C++ +D A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK-VDTA 426
Query: 260 NKIFNSLIP-EPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+F+SL P E +V ++ ++I GY ++G ++A+ + M
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 151/374 (40%), Gaps = 63/374 (16%)
Query: 10 CKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPD 69
C S G+ + + L + N+ + N ++ K G++++A + S M + D
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK----D 294
Query: 70 VVTFSSLIYGFCHADQWKE-VRLL--LNENS--LDVCSFNIIMDALCKQGLLLEAHAVCY 124
VV++++++ G+ ++++ VRL + E +DV +++ + ++GL EA VC
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 125 EMIKRGVQPDVI----------SYTILMDGYCLKC------------------------- 149
+M+ G++P+ + S LM G + C
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 150 -------KVDKARKLFDMMIEAGLVP---DVWSYNILIQGYCKIERVDEAMNLCEDMLTK 199
KVD AR +FD L P DV ++ ++I GY + ++A+ L +M +
Sbjct: 415 DMYAKCKKVDTARAMFD-----SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 200 N--LVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHL 256
+ PNA T L L N +++ + +
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Query: 257 DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
A +F++++ + V ++ L++GY +G +EA+ I+ M D T +++ A
Sbjct: 530 SDARLVFDNMMAKNEV-TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 317 FCKRKQCDKAIALY 330
D+ + +
Sbjct: 589 CSHSGMIDQGMEYF 602
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 104 NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
N +++ K LL +A +V + + D S+ I++DGY ++ A KLFD+M E
Sbjct: 80 NSVLNMYAKCRLLADAESV----FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPE 135
Query: 164 AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPD 223
V SY LI+GY + + EAM L +M ++ N VT + G + D
Sbjct: 136 RSCV----SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWD 191
Query: 224 A---WNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPNVQSYNILIS 280
+ ++ G ++ LC L A K+F+ + PE N+ ++N++++
Sbjct: 192 CRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC---LKDARKLFDEM-PERNLVTWNVMLN 247
Query: 281 GYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
GY K G +++A ++ + ++IV ++ +I+ ++ Q D+A+ Y
Sbjct: 248 GYSKAGLIEQAEELFDQITEKDIV----SWGTMIDGCLRKNQLDEALVYY 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 142/333 (42%), Gaps = 55/333 (16%)
Query: 38 YNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS 97
+N ++ G + + A KL M +R V++++LI G+ +QW E L E
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERS----CVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 98 -----LDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
L+ + ++ A G + + + IK ++ V T L+ YCL +
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
ARKLFD M E LV ++N+++ GY K +++A L + + K++V ++ +
Sbjct: 226 DARKLFDEMPERNLV----TWNVMLNGYSKAGLIEQAEELFDQITEKDIV----SWGTMI 277
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP---- 268
DG R +L +A + T M G +P ++ +++ + K ++ +++
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 269 ------------------------------EPNVQSYNILISGYCKNGRVDEAMSIYQNM 298
+ ++ S N LI+G+ KNG V++A ++
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 299 CLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
++I ++ +I+ + + A+ L++
Sbjct: 398 HDKDIF----SWNAMISGYAQSLSPQLALHLFR 426
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 169/381 (44%), Gaps = 57/381 (14%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
++ + NLV +N +++G K GL+ +A++L ++ ++ D+V++ ++I G +Q E
Sbjct: 233 EMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDE 288
Query: 89 VRL-------------------LLNENSLDVCSFNIIM--DALCKQGL----LLEAHAVC 123
+ LL+ ++ V S + + K+G L+A +
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIH 348
Query: 124 Y-----------EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWS 172
+ + + V+ + S L+ G+ V++AR++FD + D++S
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD----KDIFS 404
Query: 173 YNILIQGYCKIERVDEAMNLCEDMLTKNLV-PNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
+N +I GY + A++L +M++ + V P+A+T +F + G L + +
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 232 HYRGHRPPD-LTPYNIILETLCEQHLDKANKIFNSL--IPEPNVQSYNILISGYCKNGRV 288
++ P D LT I + C ++ A IF+ I + +N +I G +G
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGS-IETALNIFHQTKNISSSTISPWNAIICGSATHGHA 523
Query: 289 DEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNR-------DLCPFKI 341
A+ +Y ++ I +S TF +++A C + +++ + D+ +
Sbjct: 524 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGC 583
Query: 342 LMDGLRKNG-MEEVAQRVSQL 361
++D L K G +EE + + ++
Sbjct: 584 MVDLLGKAGRLEEAKEMIKKM 604
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 144/366 (39%), Gaps = 55/366 (15%)
Query: 10 CKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMI-QRGIFP 68
C S A++ +E + +N VI L K + L + MI P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 69 DVVTFSSLIYGFCHADQWKEV----RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCY 124
+ VTF + + A +E L + N D SF ++DALC+ ++EA +C+
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCF 175
Query: 125 --------------------------------------EMIKRGVQPDVISYTILMDGYC 146
+M GV D+ SY+I MD C
Sbjct: 176 GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
K KA KL+ M + DV +YN +I+ + V+ + + +M + PN
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKI---F 263
T+ + LC GR+ DA+ L M RG +P +T + L+K ++I F
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF------SRLEKPSEILSLF 349
Query: 264 NSLIP---EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
+I P + +Y +L+ + + G + + +++ M DS + +I+A ++
Sbjct: 350 GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 321 KQCDKA 326
D A
Sbjct: 410 GMLDMA 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 132/302 (43%), Gaps = 24/302 (7%)
Query: 17 NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLC--SEMIQRGIFPDVVTFS 74
AI +L+ L + YN ++ LC+ V +A++LC +I G
Sbjct: 135 EAIDAYDKLDDFNL-RDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIH 192
Query: 75 SLI-YGFCHADQW---KEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIK 128
+LI G+ W KE ++ + D+ S++I MD +CK G +A + EM
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 129 RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDE 188
R ++ DV++Y ++ V+ ++F M E G P+V ++N +I+ C+ R+ +
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 189 AMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLT---RMHYRGHRPPDLTPYN 245
A + ++M + P+++TY +C F RL L+ RM G RP + Y
Sbjct: 313 AYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPK-MDTYV 365
Query: 246 IILETLCE----QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR 301
+++ Q + K P+ +YN +I + G +D A + M R
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
Query: 302 NI 303
+
Sbjct: 426 GL 427
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y T++ + S+G I+ +E+ + +PN+ +NT+I LC+DG + A ++ EM
Sbjct: 262 YNTVIRAIGASQGVEFGIRVFREMRE-RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEV-----RLLLNENSLDVCSFNIIMDALCKQGLL 116
+RG PD +T+ L F ++ E+ R++ + + ++ ++M + G L
Sbjct: 321 PKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFL 377
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVP 168
V M + G PD +Y ++D K +D AR+ + MIE GL P
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 2 YGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEM 61
Y M +CKS A++ +E+++ ++ K ++V YNTVI + V ++ EM
Sbjct: 227 YSIYMDIMCKSGKPWKAVKLYKEMKSRRM-KLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 62 IQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNEN-----SLDVCSFNIIMDALCKQGLL 116
+RG P+V T +++I C + ++ +L+E D ++ + L K +
Sbjct: 286 RERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI 345
Query: 117 LEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNIL 176
L ++ MI+ GV+P + +Y +LM + + ++ M E+G PD +YN +
Sbjct: 346 L---SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAV 402
Query: 177 IQGYCKIERVDEAMNLCEDMLTKNLVP 203
I + +D A E+M+ + L P
Sbjct: 403 IDALIQKGMLDMAREYEEEMIERGLSP 429
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 24/273 (8%)
Query: 45 LCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGF-CHADQWKEVRLLLNENSLDVCSF 103
LC G++ A K+ EM+++ +VV ++S+I G+ + D R D+ +
Sbjct: 38 LCLMGVIASANKVFCEMVEK----NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 104 NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE 163
N ++ + G +LEA ++ +M R DV+S+ +++GY ++ ++FD M E
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCR----DVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 164 AGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPNAVTYKYLFDGLCRFGRLP 222
+V+S+N LI+GY + RV E + + M+ + ++VPN T + + G
Sbjct: 150 ----RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG--- 202
Query: 223 DAWNFLTRMH----YRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNI 277
A++F +H G+ D+ N +++ + ++ A ++F I ++ S+N
Sbjct: 203 -AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG-IKRRDLISWNT 260
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
+I+G +G EA++++ M I D TF
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTF 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 121/282 (42%), Gaps = 60/282 (21%)
Query: 88 EVRLLLNENSLDVCSFN--IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGY 145
E R L+ S N + LC G++ A+ V EM+++ +V+ +T +++GY
Sbjct: 14 ESRELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEK----NVVLWTSMINGY 69
Query: 146 CLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNA 205
L + AR+ FD+ E D+ +N +I GY ++ + EA +L + M P
Sbjct: 70 LLNKDLVSARRYFDLSPE----RDIVLWNTMISGYIEMGNMLEARSLFDQM------P-- 117
Query: 206 VTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFN 264
CR D+ +N +LE ++ ++F+
Sbjct: 118 ----------CR----------------------DVMSWNTVLEGYANIGDMEACERVFD 145
Query: 265 SLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLR-NIVRDSETFKLLINAFCKRKQC 323
+ PE NV S+N LI GY +NGRV E + ++ M ++V + T L+++A K
Sbjct: 146 DM-PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 324 DKAIALYK-------NNRDLCPFKILMDGLRKNGMEEVAQRV 358
D ++K N D+ L+D K G E+A V
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 145/314 (46%), Gaps = 37/314 (11%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL 93
+L +N +++G + GL+ +A+KL EM ++ D ++++++ G+ DQ +E +L
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 94 N------ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCL 147
+ + ++ + +I + A + + +++ G+ D + ++ LMD Y
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG- 264
Query: 148 KCK-VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
KC +D+AR +FD ++E DV S+ +I Y K R E +L +++ PN
Sbjct: 265 KCGCIDEARNIFDKIVEK----DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 207 TYKYLFDGLC-----RFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-----L 256
T+ + + G+ ++TR+ + PY+ +L + + +
Sbjct: 321 TFAGVLNACADLTTEELGK--QVHGYMTRVGF--------DPYSFASSSLVDMYTKCGNI 370
Query: 257 DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+ A + + P+P++ S+ LI G +NG+ DEA+ + + D TF +++A
Sbjct: 371 ESAKHVVDG-CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 317 FCKRKQCDKAIALY 330
+K + +
Sbjct: 430 CTHAGLVEKGLEFF 443
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 99 DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLF 158
D S+N ++ L ++ + EA YE+ ++ D++S+T ++ G+ K ++ K +LF
Sbjct: 340 DSVSWNSLITGLVQRKQISEA----YELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
MM E D ++ +I + +EA+ ML K + PN+ T+ +
Sbjct: 396 GMMPE----KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNI 277
L + R+ + + DL+ N ++ C+ + + A KIF S I EPN+ SYN
Sbjct: 452 ADLIEGLQIHGRV-VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF-SCISEPNIVSYNT 509
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+ISGY NG +A+ ++ + + TF L++A
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 111 CKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDV 170
+ G L EA A+ +M R ++S+ ++ Y K+ KA ++FD M V
Sbjct: 61 ARNGNLQEAEAIFRQMSNR----SIVSWIAMISAYAENGKMSKAWQVFDEMP----VRVT 112
Query: 171 WSYNILIQGYCKIE-RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFL- 228
SYN +I K + + +A L D+ KN AV+Y + G R GR +A FL
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIPEKN----AVSYATMITGFVRAGRFDEA-EFLY 167
Query: 229 --TRMHYRGHRPPDLTPYNIILET-LCEQHLDKANKIFNSLIPEPNVQSYNILISGYCKN 285
T + +R D N++L L ++A ++F + + V S + ++ GYCK
Sbjct: 168 AETPVKFR-----DSVASNVLLSGYLRAGKWNEAVRVFQGMAVK-EVVSCSSMVHGYCKM 221
Query: 286 GRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPFKI 341
GR+ +A S++ M RN++ T+ +I+ + K + L+ R K+
Sbjct: 222 GRIVDARSLFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/365 (19%), Positives = 159/365 (43%), Gaps = 32/365 (8%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
L+SG ++ A++ Q + ++V + +++HG CK G + A+ L M +R
Sbjct: 183 LLSGYLRAGKWNEAVRVFQGMAVKEVVSCS-----SMVHGYCKMGRIVDARSLFDRMTER 237
Query: 65 GIFPDVVTFSSLIYGFCHA----DQWKEVRLLLNENSLDVCSFNI-IMDALCKQGLLLEA 119
+V+T++++I G+ A D + + E + V S + +M C+ +
Sbjct: 238 ----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 120 HAVCYEMIKR-GVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQ 178
+ + ++ R ++ D+ LM Y + +A+ +F +M D S+N LI
Sbjct: 294 GSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSLIT 349
Query: 179 GYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRP 238
G + +++ EA L E M K++V ++ + G G + M +
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMV----SWTDMIKGFSGKGEISKCVELFGMMPEK---- 401
Query: 239 PDLTPYNIILETLCEQHLDKANKIFNSLIPE---PNVQSYNILISGYCKNGRVDEAMSIY 295
++T +I + + ++A F+ ++ + PN +++ ++S + E + I+
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 296 QNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK--NNRDLCPFKILMDGLRKNGMEE 353
+ NIV D L++ +CK + A ++ + ++ + ++ G NG +
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGK 521
Query: 354 VAQRV 358
A ++
Sbjct: 522 KALKL 526
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCH-ADQWKEVRLLLN 94
+ + +I +G +A +M+Q+ + P+ TFSS++ AD + +++
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI--- 460
Query: 95 ENSLDVCSFNIIMDALCKQGLLLEAHAVC------YEMIKRGVQPDVISYTILMDGYCLK 148
V NI+ D L Q L+ + C Y++ +P+++SY ++ GY
Sbjct: 461 --HGRVVKMNIVND-LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPNAVT 207
KA KLF M+ +G P+ ++ L+ + VD + M + N+ P
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577
Query: 208 YKYLFDGLCRFGRLPDAWNFLTRMHYRGH 236
Y + D L R G L DA N ++ M + H
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPH 606
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 117/268 (43%), Gaps = 13/268 (4%)
Query: 36 VIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE-VRLLLN 94
V +N++I GL + +++A +L +M + D+V+++ +I GF + + V L
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 95 ENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKA 154
D ++ ++ A G EA ++M+++ V P+ +++ ++ + +
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 155 RKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDG 214
++ +++ +V D+ N L+ YCK ++A + + PN V+Y + G
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISG 513
Query: 215 LCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP----EP 270
G A + + G P +T ++ + ++D K F S+ EP
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP 573
Query: 271 NVQSYNILISGYCKNGRVDEAMSIYQNM 298
Y ++ ++G +D+A ++ M
Sbjct: 574 GPDHYACMVDLLGRSGLLDDASNLISTM 601
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 31/294 (10%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
L + NLV YNT + G C++ +A KL SE+ +R + TF+SL+ G + ++
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 89 --------VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTI 140
V+L L+ N VC N ++ K G + A V M R +VIS+T
Sbjct: 493 GEQIHSQVVKLGLSCNQ-PVC--NALISMYSKCGSIDTASRVFNFMENR----NVISWTS 545
Query: 141 LMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKN 200
++ G+ + + F+ MIE G+ P+ +Y ++ + V E M +
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 201 LV-PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDK- 258
+ P Y + D LCR G L DA+ F+ M ++ D+ + L C H +
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA----DVLVWRTFLGA-CRVHSNTE 660
Query: 259 -----ANKIFNSLIPEPNVQSYNILISG-YCKNGRVDEAMSIYQNMCLRNIVRD 306
A KI L +PN + I +S Y G+ +E+ + + M RN+V++
Sbjct: 661 LGKLAARKI---LELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKE 711
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 133/345 (38%), Gaps = 55/345 (15%)
Query: 17 NAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIF-PDVVTFSS 75
+AI+ E L LV PN Y VI V + +++ G F DV S
Sbjct: 149 DAIKVFVEFLELGLV-PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCS 207
Query: 76 LIYGFCHADQWKE--VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQP 133
LI F + E ++ + L+V ++ +++ + G EA +M+ G +
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 134 DVI----------------------SYTI-----------LMDGYCLKCK----VDKARK 156
D S+ I L+D Y KC VD RK
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYA-KCSADGSVDDCRK 326
Query: 157 LFDMMIEAGLVPDVWSYNILIQGYCK-IERVDEAMNLCEDMLTKNLV-PNAVTYKYLFDG 214
+FD M + V S+ LI GY K EA+NL +M+T+ V PN T+ F
Sbjct: 327 VFDRMED----HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 215 LCRFGRLPD---AWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPEPN 271
G L D L + RG ++I + ++ A + F SL E N
Sbjct: 383 C---GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL-SEKN 438
Query: 272 VQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+ SYN + G C+N ++A + + R + + TF L++
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 128/298 (42%), Gaps = 36/298 (12%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
+L +++ ++ +I G K G + A L E+I+ G+ ADQ+
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGL---------------DADQF-- 444
Query: 89 VRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
+ N L VCS +L G + H +C IK+G + + ++ T L+D Y
Sbjct: 445 ----IVSNILKVCS------SLASLGWGKQIHGLC---IKKGYESEPVTATALVDMYVKC 491
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
++D LFD M+E DV S+ +I G+ + RV+EA M+ + PN VT+
Sbjct: 492 GEIDNGVVLFDGMLE----RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHL-DKANKIFNSLI 267
L G L +A + L M P L Y +++ L + L +AN++ N +
Sbjct: 548 LGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Query: 268 PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
EP+ + L++ C + +++ L+ D + L NA+ D+
Sbjct: 608 LEPDKTIWTSLLTA-CGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 112 KQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVW 171
K+G ++AH +IK+G+ +V ++ Y + A K+FD M E +V
Sbjct: 22 KRGESIQAH-----VIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIV---- 72
Query: 172 SYNILIQGYCKIERVDEAMNLCEDML-TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTR 230
++ ++ GY + ++A+ L ML ++ N Y + G + R
Sbjct: 73 TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYER 132
Query: 231 MHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVD 289
+ R D+ N +++ + L +AN F ++ P+ S+N LISGYCK G +D
Sbjct: 133 IGKENLRG-DVVLMNSVVDMYVKNGRLIEANSSFKEIL-RPSSTSWNTLISGYCKAGLMD 190
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
EA++++ M N+V ++ LI+ F +
Sbjct: 191 EAVTLFHRMPQPNVV----SWNCLISGFVDK 217
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGL-VPDVWSY 173
LL +AH V EM +R +++++T ++ GY K +KA +L+ M+++ + + Y
Sbjct: 55 LLSDAHKVFDEMSER----NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMY 110
Query: 174 NILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHY 233
+ +++ + + + + E + +NL + V + D + GRL +A +
Sbjct: 111 SAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEA-----NSSF 165
Query: 234 RGHRPPDLTPYNIILETLCEQHL-DKANKIFNSLIPEPNVQSYNILISGYCKNG 286
+ P T +N ++ C+ L D+A +F+ + P+PNV S+N LISG+ G
Sbjct: 166 KEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM-PQPNVVSWNCLISGFVDKG 218
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
++ + N+V + T++ G DG NKA +L M+ S + C +
Sbjct: 65 EMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124
Query: 89 VRLLLNEN------SLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ +L+ E DV N ++D K G L+EA++ E+++ P S+ L+
Sbjct: 125 LGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR----PSSTSWNTLI 180
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGY 180
GYC +D+A LF M + P+V S+N LI G+
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQ----PNVVSWNCLISGF 214
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 27/291 (9%)
Query: 39 NTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLL----- 93
N +IH C G ++ A+K+ EM Q D VTFS+L+ G+ + K + L L
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQS---VDAVTFSTLMNGYLQVSK-KALALDLFRIMR 219
Query: 94 -NENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVD 152
+E ++V + + A+ G L A + IK G+ D+ T L+ Y +
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGIS 279
Query: 153 KARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLF 212
AR++FD I DV ++N +I Y K ++E + L M + + PN+ T+ L
Sbjct: 280 SARRIFDCAIR----KDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLL 335
Query: 213 DGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-----LDKANKIFNSLI 267
C + F+ R + I+ L + + L+KA +IFN +
Sbjct: 336 SS-CAYSEAA----FVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM- 389
Query: 268 PEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI-VRDSE-TFKLLINA 316
+ +V+S+ +ISGY +G EA++++ M N VR +E TF +++NA
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 14/264 (5%)
Query: 32 KPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRL 91
K + V+YN ++ + GL + A+K+ M +R +VVT++SLI + E+
Sbjct: 268 KVDQVVYNVLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFN 323
Query: 92 LLNENSLDVCSFN-----IIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYC 146
L + ++ F+ I+ A + LL + +++K +PDV LMD Y
Sbjct: 324 LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYG 383
Query: 147 LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAV 206
+V+ +R++FD+M L D+ S+NI++ Y ++E +NL E M+ + P+ +
Sbjct: 384 KCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANKIFNS 265
T+ L G G + RM P L Y +++ L + +A K+ +
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 266 LIPEPNVQSYNILISGYCKNGRVD 289
+ +P+ + L++ +G V
Sbjct: 500 MPFKPSASIWGSLLNSCRLHGNVS 523
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 98/208 (47%), Gaps = 7/208 (3%)
Query: 125 EMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIE 184
+++KR + D + Y +L+ Y D ARK+FD M E +V ++N LI K
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV----TWNSLISVLSKKV 316
Query: 185 RVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPY 244
RV E NL M + + + T + R L ++ + PD+
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI-LKSKEKPDVPLL 375
Query: 245 NIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNI 303
N +++ + ++ + ++F+ ++ + ++ S+NI+++ Y NG ++E +++++ M +
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 304 VRDSETFKLLINAFCKRKQCDKAIALYK 331
D TF L++ + ++L++
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFE 462
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPD-VWSYNILIQGYCKIERVDEAMN 191
P ++S I + C + +D ARK+FD + ++ L+ + VW+ + GY + +A+
Sbjct: 167 PKLLSKLITLFSVCRR--LDLARKIFDDVTDSSLLTEKVWA--AMAIGYSRNGSPRDALI 222
Query: 192 LCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
+ DML + P + L ++ R + D YN++L+
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEK-VDQVVYNVLLKLY 281
Query: 252 CEQHL-DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETF 310
E L D A K+F+ + E NV ++N LIS K RV E ++++ M I T
Sbjct: 282 MESGLFDDARKVFDGM-SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATL 340
Query: 311 KLLINAFCKR-------KQCDKAIALYKNNRDLCPFKILMDGLRKNGMEEVAQRV 358
++ A C R K+ I K D+ LMD K G E ++RV
Sbjct: 341 TTILPA-CSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRV 394
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 27/300 (9%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGI-FPDVVTFSSLI-----YGFCH 82
Q+ PN+ +YN++I + L ++ +++++ PD TF + G C+
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 83 ADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ L V + N ++D K L++AH V EM +R DVIS+ L+
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER----DVISWNSLL 182
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
GY ++ KA+ LF +M++ +V S+ +I GY I EAM+ +M +
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIV----SWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 203 PNAVTYKYLFDGLCRFGRLP-DAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-----L 256
P+ ++ + + G L W +H R L + L E + +
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKW-----IHLYAERRGFLKQTG-VCNALIEMYSKCGVI 292
Query: 257 DKANKIFNSLIPEPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINA 316
+A ++F + +V S++ +ISGY +G A+ + M + + TF L++A
Sbjct: 293 SQAIQLFGQM-EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSA 351
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 133/320 (41%), Gaps = 51/320 (15%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYG---FCHADQWKEVR 90
+LV +N +I+G K G KA + M G+ PD VT L+ ++ KE
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 91 LLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
+ EN L + N +MD K G + EA + + KR ++S+T ++ GY
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYARC 336
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTY 208
+D +RKLFD M E DV +N +I G + +R +A+ L ++M T N P+ +T
Sbjct: 337 GLLDVSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 209 KYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIP 268
+ + G L D ++ R + Y++ L
Sbjct: 393 IHCLSACSQLGAL-DVGIWIHRY---------IEKYSLSL-------------------- 422
Query: 269 EPNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIA 328
NV L+ Y K G + EA+S++ + RN S T+ +I AI+
Sbjct: 423 --NVALGTSLVDMYAKCGNISEALSVFHGIQTRN----SLTYTAIIGGLALHGDASTAIS 476
Query: 329 LYKNNRD--LCPFKILMDGL 346
+ D + P +I GL
Sbjct: 477 YFNEMIDAGIAPDEITFIGL 496
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 151/341 (44%), Gaps = 54/341 (15%)
Query: 34 NLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWK----EV 89
+ V++N ++ L K L+ +++ ++MI G+ D S LI FC + + V
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSV 107
Query: 90 RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRG---VQPDVISYTILMD--- 143
++L + ++ S+N+ + + E+ + +M++ G +PD +Y +L
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 144 ------------GYCLKCKVD--------------------KARKLFDMMIEAGLVPDVW 171
G+ LK +++ ARK+FD V D+
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD----ESPVRDLV 223
Query: 172 SYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRM 231
S+N LI GY KI ++A+ + + M ++ + P+ VT L G L F +
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 232 HYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISGYCKNGRVDE 290
G R + N +++ + + +A +IF++L + + S+ +ISGY + G +D
Sbjct: 284 KENGLRMT-IPLVNALMDMFSKCGDIHEARRIFDNL-EKRTIVSWTTMISGYARCGLLDV 341
Query: 291 AMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+ ++ +M +++V + +I + K+ A+AL++
Sbjct: 342 SRKLFDDMEEKDVV----LWNAMIGGSVQAKRGQDALALFQ 378
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 30 LVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEV 89
L K +V + T+I G + GL++ ++KL +M ++ DVV ++++I G A + ++
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDA 373
Query: 90 RLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKC 149
L E + + N D + ++ + C ++ V + Y ++ Y L
Sbjct: 374 LALFQE----MQTSNTKPDEIT----MIHCLSACSQLGALDVGIWIHRY---IEKYSLSL 422
Query: 150 KVDKARKLFDMMIEAGLVPDVWS------------YNILIQGYCKIERVDEAMNLCEDML 197
V L DM + G + + S Y +I G A++ +M+
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 198 TKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQH-L 256
+ P+ +T+ L C G + ++ ++M R + P L Y+I+++ L L
Sbjct: 483 DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLL 542
Query: 257 DKANKIFNSLIPEPNVQSYNILISGYCKNGRVD 289
++A+++ S+ E + + L+ G +G V+
Sbjct: 543 EEADRLMESMPMEADAAVWGALLFGCRMHGNVE 575
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 16 GNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSS 75
GN + L +Q N + Y +I GL G + A +EMI GI PD +TF
Sbjct: 438 GNISEALSVFHGIQ--TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 495
Query: 76 LIYGFCHA-------DQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVCYEMIK 128
L+ CH D + +++ N N + ++I++D L + GLL EA + M
Sbjct: 496 LLSACCHGGMIQTGRDYFSQMKSRFNLNP-QLKHYSIMVDLLGRAGLLEEADRLMESM-- 552
Query: 129 RGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQG 179
++ D + L+ G + V+ K ++E L P +L+ G
Sbjct: 553 -PMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE--LDPSDSGIYVLLDG 600
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 41 VIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNENS--- 97
V+ LC+ G + A+K+ IFPD LI G+C A++ E L E S
Sbjct: 217 VVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGG 275
Query: 98 --LDVCSFNIIMDALCKQ-------GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLK 148
+ ++N+++D +CK L E V EM RGV + ++ +L++ C
Sbjct: 276 FEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKI 335
Query: 149 CKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNL--VPNAV 206
+ ++A LF M E G PD +Y +LI+ + R+ E + + M + + N
Sbjct: 336 RRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKK 395
Query: 207 TYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLC-EQHLDKANKIF 263
Y LC RL A + M G + P + Y++++ +C L +AN ++
Sbjct: 396 EYYGFLKILCGIERLEHAMSVFKSMKANGCK-PGIKTYDLLMGKMCANNQLTRANGLY 452
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 10/312 (3%)
Query: 31 VKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQ-RGIFPDVVTFSSLIYGFCHADQWKEV 89
+KP + +Y ++I K L++KA M PDV TF+ LI C ++ V
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 90 RLLLNENSL-----DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ-PDVISYTILMD 143
+ ++ E S ++N I+D K G+ E +V +MI+ G PDV + ++
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG 294
Query: 144 GYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVP 203
Y + K + G+ PD+ ++NILI + K + ++ + M +
Sbjct: 295 SYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 204 NAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIF 263
VTY + + + GR+ + +M Y+G +P +T +++ + K + +
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVL 414
Query: 264 NSLIPEP---NVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKR 320
++ + +N +I+ Y + G + +Y M R D TF +I +
Sbjct: 415 RQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAH 474
Query: 321 KQCDKAIALYKN 332
D L K
Sbjct: 475 GIFDAVQELEKQ 486
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
+Y +L+S KS+ A TL+ ++++ KP++ + +I CK G + + + E
Sbjct: 181 VYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 61 MIQRGIFPDVVTFSSLIYGFCHADQWKEVRLLLNE-----NSL-DVCSFNIIMDALCKQG 114
M G+ VT++++I G+ A ++E+ +L + +SL DVC+ N I+ +
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGR 300
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYN 174
+ + + GVQPD+ ++ IL+ + K + D M + +YN
Sbjct: 301 NMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYN 360
Query: 175 ILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFG 219
I+I+ + K R+++ ++ M + + PN++TY L + + G
Sbjct: 361 IVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 111 CKQ----GLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIE-AG 165
CKQ LL E M+ G++P + YT L+ Y +DKA + M +
Sbjct: 157 CKQPDQASLLFEV------MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD 210
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
PDV+++ +LI CK+ R D ++ +M + + VTY + DG + G +
Sbjct: 211 CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 270
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCE----QHLDKANKIFNSLIPEPNVQSYNILISG 281
+ L M G PD+ N I+ + + ++ F + +P++ ++NILI
Sbjct: 271 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 330
Query: 282 YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDK 325
+ K G + S+ M R + T+ ++I F K + +K
Sbjct: 331 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEK 374
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 138/340 (40%), Gaps = 47/340 (13%)
Query: 5 LMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQR 64
+++ + ++K +I Q + PN+V YN +I+ C +G V++A ++ ++
Sbjct: 186 IIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILAN 245
Query: 65 GIF-PDVVTFSSLIYGFCHADQWKEVRLLLNENSLDVCSFNIIMDALCKQGLLLEAHAVC 123
F P VT+ L G A G + +A ++
Sbjct: 246 APFAPSSVTYRHLTKGLVQA------------------------------GRIGDAASLL 275
Query: 124 YEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKI 183
EM+ +G D Y L+ GY DKA + FD + V D ++ + +
Sbjct: 276 REMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEK 335
Query: 184 ERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTP 243
EAM +L K + T L + +FG+ +AW M H PP++
Sbjct: 336 GNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEM-LDNHAPPNILS 394
Query: 244 YNI----ILETLC------EQHLDKANKIFNSLIPEPNVQSY----NILISGYCKNGRVD 289
N I+ C + ++ K+ + + +P V Y NI ++ +C+ G +
Sbjct: 395 VNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNI-VTRFCEQGMLT 453
Query: 290 EAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
EA + R++ D+ + + +I+A+ K ++ D A+ +
Sbjct: 454 EAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKM 493
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 11/232 (4%)
Query: 107 MDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILMDGYCLKCKVDKARKLFDMMI-EAG 165
+ +L + L A + + + +P V + ++ + ++ LF ++
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPNAVTYKYLFDGLCRFGRLPDA 224
+VP+V SYN +I +C VDEA+ + +L P++VTY++L GL + GR+ DA
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 225 WNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNILISG-- 281
+ L M +G D T YN ++ + DKA + F+ L + V Y+ +++
Sbjct: 272 ASLLREMLSKGQA-ADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTV--YDGIVNATF 328
Query: 282 ---YCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALY 330
+ + G EAM Y+++ + T +L+ F K + D+A AL+
Sbjct: 329 MEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALF 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 161/396 (40%), Gaps = 67/396 (16%)
Query: 1 MYGTLMSGLCKSKGSGNAIQTLQELEALQLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSE 60
Y L GL ++ G+A L+E+ + + +YN +I G G +KA + E
Sbjct: 254 TYRHLTKGLVQAGRIGDAASLLREMLSKGQAA-DSTVYNNLIRGYLDLGDFDKAVEFFDE 312
Query: 61 MIQR-GIFPDVVTFSSLIYGFCHADQWKEV----RLLLNEN-SLDVCSFNIIMDALCKQG 114
+ + ++ +V + + Y F + KE R LL++ + + N++++ K G
Sbjct: 313 LKSKCTVYDGIVNATFMEYWFEKGND-KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFG 371
Query: 115 LLLEAHAVCYEMIKRGVQPDVISYT----------------------------------- 139
EA A+ EM+ P+++S
Sbjct: 372 KKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKP 431
Query: 140 ILMD--GYC-------LKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAM 190
+MD GYC + + +A + F + L D S+ +I Y K ER+D+A+
Sbjct: 432 FVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAV 491
Query: 191 NLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILET 250
+ + M+ NL A +F L + G+L ++ LT+M R + PD + Y++++
Sbjct: 492 KMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPK-PDPSIYDVVVRG 550
Query: 251 LCE-QHLDKANKIFNSLIPEPNVQSYNIL----ISGYCKNGRVDEAMSIYQNMC--LRNI 303
LC+ LD+A I +I NV +L I + K GR +E I ++ +RN
Sbjct: 551 LCDGDALDQAKDIVGEMIRH-NVGVTTVLREFIIEVFEKAGRREEIEKILNSVARPVRNA 609
Query: 304 VRDSETFKLLINAFCKRKQCDKAIALYKNNRDLCPF 339
+ T + F A + RD P+
Sbjct: 610 GQSGNTPPRVPAVFG------TTPAAPQQPRDRAPW 639
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 35/197 (17%)
Query: 151 VDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTK-NLVPNAVTYK 209
+D A KL + + P V++ N +I + +R E+++L + + N+VPN V+Y
Sbjct: 161 LDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYN 220
Query: 210 YLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE 269
+ + C G + +A L Y IL AN F
Sbjct: 221 QIINAHCDEGNVDEA----------------LEVYRHIL----------ANAPF-----A 249
Query: 270 PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIAL 329
P+ +Y L G + GR+ +A S+ + M + DS + LI + DKA+
Sbjct: 250 PSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEF 309
Query: 330 YKNNRDLCPFKILMDGL 346
+ + C + DG+
Sbjct: 310 FDELKSKC---TVYDGI 323
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 57/317 (17%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHA----- 83
++ ++V Y ++I G ++GL +A KL EM + GI PDV T ++++ C A
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN--CCARYRLL 413
Query: 84 DQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTIL 141
D+ K V + EN L D+ N +MD K G + EA V EM + D+IS+ +
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTI 469
Query: 142 MDGYCLKCKVDKARKLFDMMIEA------------------------------------G 165
+ GY C ++A LF++++E G
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 166 LVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRFGRLPDAW 225
D N L+ Y K + A L +D+ +K+LV ++ + G G +A
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV----SWTVMIAGYGMHGFGKEAI 585
Query: 226 NFLTRMHYRGHRPPDLTPYNIILETLCEQHLDKANKIFNSLIPE----PNVQSYNILISG 281
+M G +++ +++ +D+ + FN + E P V+ Y ++
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 282 YCKNGRVDEAMSIYQNM 298
+ G + +A +NM
Sbjct: 646 LARTGDLIKAYRFIENM 662
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 147/340 (43%), Gaps = 23/340 (6%)
Query: 29 QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIFPDVVTFSSLIYGFCHADQWKE 88
++ + +++ +N++I+G +GL K + +M+ GI D+ T S+ G C +
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG-CADSRLIS 313
Query: 89 VRLLLNENSLDVCSF------NIIMDALCKQGLLLEAHAVCYEMIKRGVQPDVISYTILM 142
+ ++ + C N ++D K G L A AV EM R V+SYT ++
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMI 369
Query: 143 DGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLV 202
GY + +A KLF+ M E G+ PDV++ ++ + +DE + E + +L
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 203 PNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCEQ-HLDKANK 261
+ L D + G + +A + M R D+ +N I+ + + ++A
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEM-----RVKDIISWNTIIGGYSKNCYANEALS 484
Query: 262 IFNSLIPE----PNVQSYNILISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAF 317
+FN L+ E P+ ++ ++ D+ I+ + D L++ +
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Query: 318 CKRKQCDKAIALYKN--NRDLCPFKILMDGLRKNGMEEVA 355
K A L+ + ++DL + +++ G +G + A
Sbjct: 545 AKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 584
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 21/272 (7%)
Query: 21 TLQELEAL--QLVKPNLVIYNTVIHGLCKDGLVNKAQKLCSEMIQRGIF-PDVVTFSSLI 77
++QE E + ++ +++ +NT+I G K+ N+A L + +++ F PD T + ++
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 78 ---YGFCHADQWKEVRLLLNENSL--DVCSFNIIMDALCKQGLLLEAHAVCYEMIKRGVQ 132
D+ +E+ + N D N ++D K G LL AH + ++ +
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK--- 563
Query: 133 PDVISYTILMDGYCLKCKVDKARKLFDMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNL 192
D++S+T+++ GY + +A LF+ M +AG+ D S+ L+ VDE
Sbjct: 564 -DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 193 CEDMLTK-NLVPNAVTYKYLFDGLCRFGRLPDAWNFLTRMHYRGHRPPDLTPYNIILETL 251
M + + P Y + D L R G L A+ F+ M PPD T + +L
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI----PPDATIWGALL-CG 677
Query: 252 CEQHLDK--ANKIFNSLIP-EPNVQSYNILIS 280
C H D A K+ + EP Y +L++
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMA 709
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 45/294 (15%)
Query: 75 SLIYGFCHADQWKEVRLLLNENSLDVCSF-NIIMDALCKQGLLLEAHAVCYEMIKRGVQP 133
SL+Y C KE + +E ++ F NI+M+ L K G + + +M+ GV+
Sbjct: 136 SLMYTNC--GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEM 193
Query: 134 DVISYTIL---------------MDGYCLKC--------------------KVDKARKLF 158
D +++ + + G+ LK +VD ARK+F
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 159 DMMIEAGLVPDVWSYNILIQGYCKIERVDEAMNLCEDMLTKNLVPNAVTYKYLFDGLCRF 218
D M E DV S+N +I GY ++ +++ ML + + T +F G C
Sbjct: 254 DEMTE----RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG-CAD 308
Query: 219 GRLPDAWNFLTRMHYRGHRPPDLTPYNIILETLCE-QHLDKANKIFNSLIPEPNVQSYNI 277
RL + + + + N +L+ + LD A +F + + +V SY
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM-SDRSVVSYTS 367
Query: 278 LISGYCKNGRVDEAMSIYQNMCLRNIVRDSETFKLLINAFCKRKQCDKAIALYK 331
+I+GY + G EA+ +++ M I D T ++N + + D+ +++
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421