Miyakogusa Predicted Gene
- Lj6g3v0001260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0001260.1 tr|B9MYZ7|B9MYZ7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595003 PE=4
SV=1,26.67,3e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; no desc,gene.g63668.t1.1
(566 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 346 3e-95
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 345 3e-95
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 345 4e-95
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 8e-95
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 340 2e-93
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 337 2e-92
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 334 1e-91
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 9e-90
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 9e-90
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 323 2e-88
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 322 3e-88
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 321 7e-88
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 3e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 9e-87
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 316 3e-86
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 4e-86
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 8e-86
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 314 1e-85
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 3e-85
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 9e-85
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 308 8e-84
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 5e-82
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 9e-82
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 1e-81
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 5e-81
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 287 1e-77
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 8e-77
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 6e-76
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 1e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 9e-74
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 273 2e-73
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 3e-73
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 271 8e-73
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 1e-72
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 270 2e-72
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 268 1e-71
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 266 2e-71
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 266 2e-71
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 4e-71
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 262 4e-70
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 4e-70
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 4e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 261 1e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 258 6e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 256 4e-68
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 248 1e-65
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 247 2e-65
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 242 6e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 7e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 240 2e-63
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 239 3e-63
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 5e-63
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 6e-63
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 6e-63
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 238 1e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 234 1e-61
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 233 4e-61
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 231 9e-61
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 5e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 6e-53
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 9e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 7e-49
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 5e-47
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 7e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 104 2e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 5e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 8e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 4e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 93 6e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 93 6e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 8e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 1e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 90 4e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 84 2e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 84 3e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 80 4e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 1e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 5e-14
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 76 8e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 74 3e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 72 1e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 6e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 1e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 64 3e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 4e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 7e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 4e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 4e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 49 7e-06
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 321/565 (56%), Gaps = 5/565 (0%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ ++ PN VT +L A + G +HG + G I + +LL MY KCG
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI-KNSLLSMYSKCG 288
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
A+ +F M+ T +WN +I+ Y+ +G E+ F +MI VLPD +T ++
Sbjct: 289 RFDDASKLFRMMSRADTV--TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ S ++ + L + K IH Y++R + D+ +AL+D Y K V+ A+ +F + + D
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V++ M++GYL N L ++++ +F ++K+ +SPN ++++ + L ++L R +HG+
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+++ + R I +I YAKCG + A +F R+ RD+VSW SMIT + A
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
I +FR + + D V++ + L A + L S K +H + ++ ++LI
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELT 418
YAKCG L A +F+ M E+ + SWN+++ A HG + L LF+ M + I+PD++T
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
F I+++C H G V+EG++ FRSM +Y I P + HY C++DL RAG+LTEAY VKSM
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
P + TLL ACRL+ + E+ E + +++ L+P NS YVLISN A W+ V
Sbjct: 707 PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVT 766
Query: 539 HIRAMTKDKELKSTPGYSLIELDKQ 563
+R++ K++E++ PGYS IE++K+
Sbjct: 767 KVRSLMKEREVQKIPGYSWIEINKR 791
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 263/509 (51%), Gaps = 12/509 (2%)
Query: 44 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 103
C+E ++L+ Y + G + + + +F ++ + WN ++ Y G + F
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI--WNVMLNGYAKCGALDSVIKGFS 228
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-- 161
M ++ P+ +T + CA + G +HG ++ GV+ + +L+ +YSK
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 162 -FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
FD A K+F + D V +N M++GY+++ L E++ F+EMI V P+ F +L
Sbjct: 289 RFD--DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
+ +VS ++ + IH Y++RH + + + +I Y KC + A+ +F++ S D+
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
V +T+MI+GY+H+G +++ +FR L + + + +TL+S+L + L L +E+H
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
+ ++ ++I YAKCG++N+A +F+++++R + SWN+M+ A N +
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 526
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
+ +F M + I D ++ ++ L+AC++ G I MI+ +++ + +ID
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLID 585
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK---LEPRN 517
+ ++ G L A N+ K+M + + ++++AC +G + + ++++ + P
Sbjct: 586 MYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 518 SSSYVLISNILAEGGRWDEVAHIRAMTKD 546
+ +IS+ G + V R+MT+D
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 228/475 (48%), Gaps = 11/475 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P R++L LL A + L++G+ +H + I D + +L MY CG
Sbjct: 35 PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISG-DSYTDERILGMYAMCGSFSDCGK 91
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F +++ +++ WN +I++++ NG +A + +M+ V PD+ T + +C L
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDL---YSKFDVTKARKMFERLRNKDAVIYNV 184
+ + +G++ + ++L+ Y K DV K+F+R+ KD VI+NV
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPS--KLFDRVLQKDCVIWNV 209
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M+ GY K I F M +SPN F ++S + I L +HG V+
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
I N ++ Y+KCG A +F M D V+W MI+GYV G ++E++ F
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ + D++T SLL ++S+ L K++HC R ++ + ++LI Y KC
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
++MA+ +F Q + + AM+ Y +G Y + L++F + I P+E+T SIL
Sbjct: 390 GVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILP 449
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC-IIDLLSRAGQLTEAYNLVKSM 478
++ G ++ +I++ + C +ID+ ++ G++ AY + + +
Sbjct: 450 VIGILLALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 300/551 (54%), Gaps = 5/551 (0%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T + + + L S+ G +HG+ ++ GFG + + +L+ Y K V A VF +
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDE 255
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
M T V SWN +I Y+ NG A + +F QM+ + DL T+ + CA+ +
Sbjct: 256 M--TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 190
G+++H ++ + C L+D+YSK D+ A+ +F + ++ V Y M+ GY
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+ L EA+ +F EM + +SP+V +++ + R + + +H ++ + +
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
++N ++ YAKCG +Q A LVF+ MR +D++SW ++I GY + + +EA+ LF LL E
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 311 -LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 369
D T+ +L A + L +E+H R + + V NSL+ YAKCG L +A
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 370 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
LF + + L SW M+ Y MHG E + LFN M+ I+ DE++F S+L ACSHS
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
GLV+EG + F M E I P HY CI+D+L+R G L +AY +++MP +
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673
Query: 490 LLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 549
LL CR++ D ++ E +A+++ +LEP N+ YVL++NI AE +W++V +R + L
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Query: 550 KSTPGYSLIEL 560
+ PG S IE+
Sbjct: 734 RKNPGCSWIEI 744
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 233/471 (49%), Gaps = 6/471 (1%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
TL S+L A SL++G+ + + GF V D + L MY CG +K A+ VF +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGF-VIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
+ WN L+ +G + LF++M+ V D T + S + L +
Sbjct: 155 VKIEKALF--WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL 190
G+ +HG++++ G +LV Y K V ARK+F+ + +D + +N ++ GY+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
N L + ++VF +M+ + ++A +++ + +D R I L R++H ++ +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
N ++ Y+KCG L A+ VF M R +VS+TSMI GY G EA+ LF ++ E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+ D T+ ++L ++ L K VH G ++ V+N+L+ YAKCG + A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN-HMKLGNIKPDELTFTSILTACSHS 429
+F +M + + SWN ++G Y+ + E L LFN ++ PDE T +L AC+
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
++G +I ++R V N ++D+ ++ G L A+ L + S
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVA-NSLVDMYAKCGALLLAHMLFDDIAS 562
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 187/360 (51%), Gaps = 2/360 (0%)
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMF 171
D TL + + CA+ L GK + ++ G D + L +Y+ D+ +A ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
+ ++ + A+ +N++M K+ +I +F +M+ V + F + + S LR +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 291
+HG++L+ + R + N ++ Y K + AR VF+ M RD++SW S+I GYV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 351
+G ++ + +F + + ID T++S+ + +S + VH + +A +E
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
N+L+ Y+KCG L+ A+ +F++M++R + S+ +M+ YA G E +KLF M+
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
I PD T T++L C+ L++EG ++ I+E + N ++D+ ++ G + EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
++++R P+ T+ +L A A L + +GR IHGY +R G+ D +L+DMY KCG
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRHVANSLVDMYAKCG 548
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ +A +F + S + SW +IA Y +G EA LF QM + D ++ +
Sbjct: 549 ALLLAHMLFDDI--ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR-NK 177
+ +C+ + G M +EP + +VD+ ++ D+ KA + E +
Sbjct: 607 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 666
Query: 178 DAVIYNVMMTG 188
DA I+ ++ G
Sbjct: 667 DATIWGALLCG 677
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 345 bits (886), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 324/577 (56%), Gaps = 22/577 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLG---SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYH 57
M D+ + P+ TLVS++ A + L L G+ +H Y +R+G + TL+ MY
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIINTLVAMYG 247
Query: 58 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
K G + + + G +WN ++++ N Q LEA E R+M+ V PD T+
Sbjct: 248 KLGKLASSKVLLGSFGGRDLV--TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKF-DVTKARKMFERLR 175
++ + +C+ L+ L GK +H Y ++ G ++ + +ALVD+Y V R++F+ +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLAR 234
++ ++N M+ GY +N+ EA+ +F M + + + N ++ A
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 294
+IHG+V++ + N ++ Y++ G + A +F +M RDLV+W +MITGYV
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSE 485
Query: 295 HIDEAIILFRLLQ-----------RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
H ++A++L +Q R +L+ +S+TL+++L + + L L+ KE+H +
Sbjct: 486 HHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK 545
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
+++V ++L+ YAKCG L M+R +F Q+ ++ + +WN ++ AY MHGN E + L
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDL 605
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
M + +KP+E+TF S+ ACSHSG+V+EGL+IF M +Y + P HY C++DLL
Sbjct: 606 LRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLG 665
Query: 464 RAGQLTEAYNLVKSMPSTHSSA-ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV 522
RAG++ EAY L+ MP + A A +LL A R++ + EIGE A+ +++LEP +S YV
Sbjct: 666 RAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYV 725
Query: 523 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
L++NI + G WD+ +R K++ ++ PG S IE
Sbjct: 726 LLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 234/492 (47%), Gaps = 21/492 (4%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ +LL A A L ++ G+ IH + + G+GV TL+++Y KCG
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +++ + SWN LI++ + A E FR M+ V P TL + + +C+ L
Sbjct: 155 VFDRISERNQV--SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 128 ---DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 183
+ L GK +H Y +R G E + LV +Y K + ++ + +D V +N
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
+++ +N+ +EA+ EM+ V P+ +++ A S L +R + +H Y L++
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 331
Query: 244 QYITRVE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ + + ++ Y C + R VF+ M R + W +MI GY + H EA++L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 303 F-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
F + + L +S T+ ++ A + G S + +H + ++ V N+L+ Y+
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-----------LG 410
+ GK+++A +F +M +R L +WN M+ Y ++ + L L + M+
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
++KP+ +T +IL +C+ + +G +I I+ V + ++D+ ++ G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG-SALVDMYAKCGCLQM 570
Query: 471 AYNLVKSMPSTH 482
+ + +P +
Sbjct: 571 SRKVFDQIPQKN 582
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 147/298 (49%), Gaps = 5/298 (1%)
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++ ++++L EA+ + +MI + + P+ F L+ AV+DL+D+ L + IH +V +
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 245 Y-ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 303
Y + V +AN +++ Y KCG VF+R+ R+ VSW S+I+ + A+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAV---KEVHCLTYRAFHGKELSVNNSLITTY 360
R + EN+ S TL+S++ A S L + K+VH R + N+L+ Y
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMY 246
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
K GKL ++ L R L +WN +L + + E L+ M L ++PDE T +
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
S+L ACSH ++ G ++ ++ ++ + ++D+ Q+ + M
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 22/430 (5%)
Query: 64 MAAAVFGKMN---ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+A+AV G + + S + W L+ + + + EA + MI + PD
Sbjct: 44 VASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVA-CTALVDLYSKF-DVTKARKMFERLRNKD 178
+ + A+L + GK IH ++ + G D V LV+LY K D K+F+R+ ++
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL---RDIRLARS 235
V +N +++ + A+ F M+ +V P+ +++++A S+L + + +
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ 223
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
+H Y LR + I N ++ Y K G L ++++ RDLV+W ++++ +
Sbjct: 224 VHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS-VNN 354
+ EA+ R + E + D T+ S+L A S L L KE+H + E S V +
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIK 413
+L+ Y C ++ R +F M +R + WNAM+ Y+ + + E L LF M + +
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 414 PDELTFTSILTACSHSGLVEE-----GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
+ T ++ AC SG G + R + R+ + N ++D+ SR G++
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV------QNTLMDMYSRLGKI 456
Query: 469 TEAYNLVKSM 478
A + M
Sbjct: 457 DIAMRIFGKM 466
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 304/564 (53%), Gaps = 4/564 (0%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + P LL L+ G+ IHG ++ GF + D T L +MY KC
Sbjct: 126 MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL-DLFAMTGLENMYAKCR 184
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A VF +M SWN ++A Y NG A A E+ + M + P +T+ +
Sbjct: 185 QVNEARKVFDRMPERDLV--SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSV 242
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ + + L + GK IHGY +R G + + TALVD+Y+K + AR++F+ + ++
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V +N M+ Y++N+ P EA+ +F +M+ V P + + A +DL D+ R IH
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+ V + N +I Y KC + A +F +++SR LVSW +MI G+ +G +A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ F ++ ++ D+ T +S++ A+++L K +H + R+ K + V +L+
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
YAKCG + +AR +F M+ER +T+WNAM+ Y HG L+LF M+ G IKP+ +TF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
S+++ACSHSGLVE GL+ F M Y+I HY ++DLL RAG+L EA++ + MP
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 539
+ +L AC+++ + E A+++ +L P + +VL++NI W++V
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 540 IRAMTKDKELKSTPGYSLIELDKQ 563
+R + L+ TPG S++E+ +
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNE 686
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 226/413 (54%), Gaps = 8/413 (1%)
Query: 18 HAAAKL----GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 73
H AA L SL+E R I + G + F+T L+ ++ + G V AA VF ++
Sbjct: 38 HPAALLLERCSSLKELRQILPLVFKNGL-YQEHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
+ + ++ ++ + +A + F +M + V P + + C + L G
Sbjct: 97 SKLNVL--YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
K IHG +++ G D+ A T L ++Y+K V +ARK+F+R+ +D V +N ++ GY +N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
+ A+ + M + ++ P+ ++++ AVS LR I + + IHGY +R + + V I+
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
++ YAKCG L+ AR +F+ M R++VSW SMI YV + + EA+++F+ + E ++
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
V+++ L A + LG L + +H L+ + +SV NSLI+ Y KC +++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
F ++ R L SWNAM+ +A +G + L F+ M+ +KPD T+ S++TA
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 156/284 (54%), Gaps = 1/284 (0%)
Query: 153 TALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 211
T LV L+ ++ V +A ++FE + +K V+Y+ M+ G+ K +A+ F M V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 212 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 271
P V F L+ D ++R+ + IHG +++ + + + + YAKC + AR V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 272 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL 331
F+RM RDLVSW +++ GY +G A+ + + + ENL+ +T++S+L A+S L +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 332 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAY 391
S KE+H R+ ++++ +L+ YAKCG L AR LF M ER + SWN+M+ AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 392 AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEG 435
+ N E + +F M +KP +++ L AC+ G +E G
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 23/272 (8%)
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 274
AL L S++ +LR I +G H + T+ ++ + + G + A VF
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTK------LVSLFCRYGSVDEAARVFEP 94
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
+ S+ V + +M+ G+ +D+A+ F ++ +++ LL+ L
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
KE+H L ++ +L L YAKC ++N AR +F +M ER L SWN ++ Y+ +
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 395 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI--------FRSMIREY 446
G L++ M N+KP +T S+L A S L+ G +I F S++
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
T ++D+ ++ G L A L M
Sbjct: 275 T---------ALVDMYAKCGSLETARQLFDGM 297
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 344 bits (883), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/554 (33%), Positives = 298/554 (53%), Gaps = 8/554 (1%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
+ + L A +L L G+ IH ++ D + T LLDMY KCG +K A V
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVLTGLLDMYAKCGEIKSAHKV 198
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F + T V W +IA Y+ N E LF +M VL + T I++C +L
Sbjct: 199 FNDI--TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 187
L GK HG +++ G+E T+L+D+Y K D++ AR++F + D V++ M+
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
GY N EA+++F +M + + PN +++S + ++ L RS+HG ++ I
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IW 375
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
+AN ++H YAKC + A+ VF +D+V+W S+I+G+ +G I EA+ LF +
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA--FHGKELSVNNSLITTYAKCGK 365
E++ + VT+ SL A + LG L+ +H + + + V +L+ YAKCG
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
AR +F + E+ +W+AM+G Y G+ L+LF M KP+E TFTSIL+A
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
C H+G+V EG + F SM ++Y P HY C++D+L+RAG+L +A ++++ MP
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 486 ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 545
L C ++ ++GE + K++L L P ++S YVL+SN+ A GRW++ +R + K
Sbjct: 616 CFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMK 675
Query: 546 DKELKSTPGYSLIE 559
+ L G+S +E
Sbjct: 676 QRGLSKIAGHSTME 689
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 262/532 (49%), Gaps = 14/532 (2%)
Query: 21 AKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFGKMNATSTTV 79
+K ++ R HG + G G+ +I T L+ +Y G K A VF ++ +
Sbjct: 52 SKCTNIDSLRQSHG--VLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 80 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 139
W ++ Y N +++E +L+ ++ D + + A+ +C EL L +GK IH
Sbjct: 110 --WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 140 MIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
++++ D V T L+D+Y+K ++ A K+F + ++ V + M+ GY+KNDL E
Sbjct: 168 LVKV-PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 258
+ +F+ M + +V N + LI A + L + + HG +++ + ++
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 259 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 318
Y KCG + AR VFN DLV WT+MI GY H+G ++EA+ LF+ ++ ++ + VT+
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
S+L + L + VH L+ + + +V N+L+ YAKC + A+Y+F+ +E
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKV-GIWDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ + +WN+++ ++ +G+ E L LF+ M ++ P+ +T S+ +AC+ G + G +
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 439 FRSMIREYTIVPGEVHYN-CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLY 497
++ + VH ++D ++ G A L+ ++ ++
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 498 GDTEIG--EAIAKQILKLEPRNSSSYVLISNILAEGGRWDE-VAHIRAMTKD 546
GDT IG E + + K + N S++ I + G +E + +M KD
Sbjct: 525 GDT-IGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKD 575
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 7/226 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + PN VT+ S+L + +L+ GR++HG +I+ G+ D L+ MY KC
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK--VGIWDTNVANALVHMYAKCY 391
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF +M + V +WN +I+ + NG EA LF +M V P+ +T+A+
Sbjct: 392 QNRDAKYVF-EMESEKDIV-AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449
Query: 121 ILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
+CA L L G S+H Y +++G + TAL+D Y+K D AR +F+ + K
Sbjct: 450 FSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK 509
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ + ++ M+ GY K + ++ +F EM+K PN + F +++SA
Sbjct: 510 NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 36/317 (11%)
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
+S +I R HG + + + + IA +++ Y GY + ARLVF+++ D W
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLW 110
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
M+ Y + E + L+ LL + R D + L+A ++L L K++HC +
Sbjct: 111 KVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK 170
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
+ V L+ YAKCG++ A +F +T R + W +M+ Y + E L L
Sbjct: 171 VPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 404 FNHMKLGNIKPDELTFTSILTACS-----------HSGLVEEGLQI-------------- 438
FN M+ N+ +E T+ +++ AC+ H LV+ G+++
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 439 ------FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH---SSAALCT 489
R + E++ V V + +I + G + EA +L + M + + +
Sbjct: 290 CGDISNARRVFNEHSHVD-LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 490 LLSACRLYGDTEIGEAI 506
+LS C L + E+G ++
Sbjct: 349 VLSGCGLIENLELGRSV 365
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKC 59
M + + PN VT+ SL A A LGSL G ++H Y+++ GF + T LLD Y KC
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKC 493
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A +F + +T +W+ +I Y G + + ELF +M+ ++ P+ T +
Sbjct: 494 GDPQSARLIFDTIEEKNTI--TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 120 AILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKF-DVTKARKMFERL 174
+ +C + GK M + P T +VD+ ++ ++ +A + E++
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 311/557 (55%), Gaps = 4/557 (0%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T+VS L A + G+ IH ++ + L+ MY +CG + A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+ +MN + V +WN LI Y+ N EA E F MI D +++ + I + L
Sbjct: 342 ILRQMN--NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRL 399
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDAVIYNVMM 186
L G +H Y+I+ G + ++ L+D+YSK ++T + F R+ +KD + + ++
Sbjct: 400 SNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY +ND VEA+ +F ++ K + + + +++ A S L+ + + + IH ++LR +
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
V I N+++ Y KC + YA VF ++ +D+VSWTSMI+ +G+ EA+ LFR +
Sbjct: 520 DTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
L DSV L+ +L A + L L+ +E+HC R E S+ +++ YA CG L
Sbjct: 579 VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDL 638
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
A+ +F ++ + L + +M+ AY MHG ++LF+ M+ N+ PD ++F ++L AC
Sbjct: 639 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 698
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
SH+GL++EG + M EY + P HY C++D+L RA + EA+ VK M + ++
Sbjct: 699 SHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEV 758
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
C LL+ACR + + EIGE A+++L+LEP+N + VL+SN+ AE GRW++V +RA K
Sbjct: 759 WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKA 818
Query: 547 KELKSTPGYSLIELDKQ 563
++ PG S IE+D +
Sbjct: 819 SGMEKHPGCSWIEMDGK 835
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 206/418 (49%), Gaps = 11/418 (2%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 75
+L K ++ +GR +H + + L+ MY KCG + A VF +M
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM--P 143
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
T +WN +I AY+ NG+ A L+ M V L + + +CA+L + G
Sbjct: 144 DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK-DAVIYNVMMTGYLKND 193
+H ++++G ALV +Y+K D++ AR++F+ + K DAV++N +++ Y +
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ-YITRVEIA 252
+E + +F EM +PN ++ ++A +L + IH VL+ + + + +
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVC 323
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
N +I Y +CG + A + +M + D+V+W S+I GYV + EA+ F + +
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
D V++ S++ A +L L A E+H + L V N+LI Y+KC N+ Y+
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC---NLTCYM 440
Query: 373 ---FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
F +M ++ L SW ++ YA + + E L+LF + ++ DE+ SIL A S
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 167/346 (48%), Gaps = 7/346 (2%)
Query: 124 CAELDYLCHGKSIHGYMIRM--GVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 180
C + + G+ +H + + E D +A LV +Y K + A K+F+ + ++ A
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLA-GKLVFMYGKCGSLDDAEKVFDEMPDRTAF 148
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N M+ Y+ N P A+ ++ M V ++ F L+ A + LRDIR +H +
Sbjct: 149 AWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLL 208
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA 299
++ Y + I N ++ YAK L AR +F+ + + D V W S+++ Y G E
Sbjct: 209 VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLIT 358
+ LFR + +S T++S L A KE+H + + H EL V N+LI
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
Y +CGK+ A + +QM + +WN+++ Y + Y E L+ F+ M K DE++
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 464
TSI+ A + G+++ +I+ +V N +ID+ S+
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG-NTLIDMYSK 433
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 5/277 (1%)
Query: 207 KMSVSPN---VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-IANQIIHTYAKC 262
++ VS N V F ++ R + R +H + + ++ +A +++ Y KC
Sbjct: 70 RLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC 129
Query: 263 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 322
G L A VF+ M R +W +MI YV +G A+ L+ ++ E + + + +LL
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 323 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC-L 381
+A ++L + + E+H L + + + N+L++ YAK L+ AR LF E+
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 382 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 441
WN++L +Y+ G E L+LF M + P+ T S LTAC + G +I S
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 442 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+++ T N +I + +R G++ +A +++ M
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 5/223 (2%)
Query: 4 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 63
+R+ + + L S+L A++ L S+ + IH + +R+ G+ D + + L+D+Y KC +
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK--GLLDTVIQNELVDVYGKCRNMG 538
Query: 64 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 123
A VF + V SW +I++ NG EA ELFR+M+ + D + L + +
Sbjct: 539 YATRVFESIKGKD--VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSA 596
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 182
A L L G+ IH Y++R G + A+VD+Y+ D+ A+ +F+R+ K + Y
Sbjct: 597 AASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
M+ Y + A+ +F +M +VSP+ FL L+ A S
Sbjct: 657 TSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 699
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + L + V L+ +L AAA L +L +GR IH Y +R+GF + I ++DMY CG
Sbjct: 578 MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI-AVAVVDMYACCG 636
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A AVF ++ + +I AY +G A ELF +M H V PD ++
Sbjct: 637 DLQSAKAVFDRIERKGLL--QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694
Query: 121 ILSCAELDYLCHGKSI 136
+ +C+ L G+
Sbjct: 695 LYACSHAGLLDEGRGF 710
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 316/564 (56%), Gaps = 9/564 (1%)
Query: 6 LYPN-RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 64
+ PN R LVS+L + G +G +H Y ++ G G+ + I L+DMY KC M
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGL-NLITSNYLIDMYCKCREPLM 59
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF M V SW+ L++ ++ NG + LF +M + + P+ T + + +C
Sbjct: 60 AYKVFDSM--PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC 117
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 183
L+ L G IHG+ +++G E + +LVD+YSK + +A K+F R+ ++ + +N
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWN 177
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVS--PNVALFLNLISAVSDLRDIRLARSIHGYVL 241
M+ G++ +A++ F M + ++ P+ +L+ A S I + IHG+++
Sbjct: 178 AMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 242 RHQY--ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
R + + I ++ Y KCGYL AR F++++ + ++SW+S+I GY G EA
Sbjct: 238 RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEA 297
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ LF+ LQ N +IDS L S++ + L K++ L + G E SV NS++
Sbjct: 298 MGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDM 357
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
Y KCG ++ A F +M + + SW ++ Y HG + +++F M NI+PDE+ +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
++L+ACSHSG+++EG ++F ++ + I P HY C++DLL RAG+L EA +L+ +MP
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 539
+ TLLS CR++GD E+G+ + K +L+++ +N ++YV++SN+ + G W+E +
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGN 537
Query: 540 IRAMTKDKELKSTPGYSLIELDKQ 563
R + K LK G S +E++++
Sbjct: 538 ARELGNIKGLKKEAGMSWVEIERE 561
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 204/404 (50%), Gaps = 12/404 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M Q +YPN T + L A L +L++G IHG+ ++ GF + E+ +L+DMY KCG
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV-GNSLVDMYSKCG 156
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--IHRKVLPDLLTLA 118
+ A VF ++ ++ SWN +IA ++H G +A + F M + K PD TL
Sbjct: 157 RINEAEKVFRRI--VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 214
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACT-ALVDLYSKFD-VTKARKMFERLR 175
+ + +C+ + GK IHG+++R G P T +LVDLY K + ARK F++++
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
K + ++ ++ GY + VEA+ +F + +++ + ++I +D +R +
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
+ ++ + N ++ Y KCG + A F M+ +D++SWT +ITGY HG
Sbjct: 335 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 394
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN- 354
+++ +F + R N+ D V +++L A S G + +E+ HG + V +
Sbjct: 395 GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET-HGIKPRVEHY 453
Query: 355 -SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
++ + G+L A++L M + + W +L +HG+
Sbjct: 454 ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 322/566 (56%), Gaps = 10/566 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D + P+ VT++S++ A+LG L+ R++HG R+ F + DE +LL MY KCG
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL-DETLCNSLLTMYSKCG 251
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ + +F K+ + SW +I++Y + +A F +MI + P+L+TL +
Sbjct: 252 DLLSSERIFEKIAKKNAV--SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT-ALVDLYSKF-DVTKARKMFERLRNKD 178
+ SC + + GKS+HG+ +R ++P+ + + ALV+LY++ ++ + + +++
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V +N +++ Y + ++A+ +F +M+ + P+ + ISA + + L + IHG
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG 429
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+V+R ++ + N +I Y+K G + A VFN+++ R +V+W SM+ G+ +G+ E
Sbjct: 430 HVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKELSVNNSLI 357
AI LF + L ++ VT ++++QA S +G L K VH L K+L + +LI
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDLFTDTALI 546
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
YAKCG LN A +F+ M+ R + SW++M+ AY MHG + FN M KP+E+
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
F ++L+AC HSG VEEG F ++++ + + P H+ C IDLLSR+G L EAY +K
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKE 665
Query: 478 MPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 537
MP ++ +L++ CR++ +I +AI + + ++ Y L+SNI AE G W+E
Sbjct: 666 MPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEF 725
Query: 538 AHIRAMTKDKELKSTPGYSLIELDKQ 563
+R+ K LK PGYS IE+D++
Sbjct: 726 RRLRSAMKSSNLKKVPGYSAIEIDQK 751
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 280/529 (52%), Gaps = 16/529 (3%)
Query: 9 NRVTLVSLLHAAAKLGS---LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
++ S+L A A GS L G +HG I+ G D + ET+LL MY + G + A
Sbjct: 99 SKFVFPSVLRACA--GSREHLSVGGKVHGRIIKGGVDD-DAVIETSLLCMYGQTGNLSDA 155
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
VF M +W+ L+++ L NG+ ++A +F+ M+ V PD +T+ + + CA
Sbjct: 156 EKVFDGMPVRDLV--AWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCA 213
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
EL L +S+HG + R + D C +L+ +YSK D+ + ++FE++ K+AV +
Sbjct: 214 ELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTA 273
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M++ Y + + +A+ F EMIK + PN+ +++S+ + IR +S+HG+ +R +
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 245 YITRVE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 303
E ++ ++ YA+CG L V + R++V+W S+I+ Y H G + +A+ LF
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
R + + ++ D+ TL S + A G + K++H R E V NSLI Y+K
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKS 452
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
G ++ A +F Q+ R + +WN+ML ++ +GN E + LF++M ++ +E+TF +++
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
ACS G +E+G + +I + + +ID+ ++ G L A + ++M S
Sbjct: 513 QACSSIGSLEKGKWVHHKLI--ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSI 570
Query: 484 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 532
+ ++++A ++G IG AI+ +E + V+ N+L+ G
Sbjct: 571 VSWS-SMINAYGMHG--RIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 189/358 (52%), Gaps = 8/358 (2%)
Query: 123 SCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 180
SC+ L + +H +++ G + D + T L++ Y+ +R +FE D+
Sbjct: 10 SCSSLRLVSQ---LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD-IRLARSIHGY 239
+Y V++ + L AI+++H ++ + + +F +++ A + R+ + + +HG
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+++ I ++ Y + G L A VF+ M RDLV+W+++++ + +G + +A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ +F+ + + + D+VT+IS+++ ++LGCL + VH R + ++ NSL+T
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE-VLKLFNHMKLGNIKPDELT 418
Y+KCG L + +F+++ ++ SW AM+ +Y G ++E L+ F+ M I+P+ +T
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN-RGEFSEKALRSFSEMIKSGIEPNLVT 305
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 476
S+L++C GL+ EG + +R E +++L + G+L++ +++
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/586 (32%), Positives = 316/586 (53%), Gaps = 45/586 (7%)
Query: 14 VSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKMAAAVF 69
+SLLH L SL R IH I+ G ++ E +L + + G+ A +VF
Sbjct: 37 LSLLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVF 91
Query: 70 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 129
+ + + WN + + + + A +L+ MI +LP+ T + SCA+
Sbjct: 92 KTIQEPNLLI--WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 130 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD---------------- 163
G+ IHG+++++G + D+ T+L+ +Y + FD
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 164 ------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 217
+ A+K+F+ + KD V +N M++GY + EA+ +F +M+K +V P+ +
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 218 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 277
+ ++SA + I L R +H ++ H + + ++I N +I Y+KCG L+ A +F R+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 278 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
+D++SW ++I GY H EA++LF+ + R + VT++S+L A + LG + + +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 338 HCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 395
H + G S+ SLI YAKCG + A +F + + L+SWNAM+ +AMHG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 455
LF+ M+ I+PD++TF +L+ACSHSG+++ G IFR+M ++Y + P HY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 456 NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP 515
C+IDLL +G EA ++ M C+LL AC+++G+ E+GE+ A+ ++K+EP
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569
Query: 516 RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
N SYVL+SNI A GRW+EVA RA+ DK +K PG S IE+D
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 125/239 (52%), Gaps = 6/239 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + P+ T+V+++ A A+ GS++ GR +H + GFG +I L+D+Y KCG
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV-NALIDLYSKCG 315
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A +F ++ V SWN LI Y H EA LF++M+ P+ +T+ +
Sbjct: 316 ELETACGLFERL--PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 121 ILSCAELDYLCHGKSIHGYMIR--MGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
+ +CA L + G+ IH Y+ + GV T+L+D+Y+K D+ A ++F + +K
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
+N M+ G+ + + ++F M K+ + P+ F+ L+SA S + L R I
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCD-EIFETTLLDMYHKCGGVKMAA 66
PN VT++S+L A A LG++ GR IH Y +R GV + T+L+DMY KCG ++ A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 424
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
VF + ++ SWN +I + +G+A +F+LF +M + PD +T + +C+
Sbjct: 425 QVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSH 482
Query: 127 LDYLCHGKSIHGYMIR-MGVEPDMVACTALVDL 158
L G+ I M + + P + ++DL
Sbjct: 483 SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/572 (33%), Positives = 314/572 (54%), Gaps = 19/572 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M L P+ T S+L A ++ +G IH A++ GF + D +L+ +Y +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGF-MWDVYVAASLIHLYSRYK 199
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL---FRQMIHRKVLPDLLTL 117
V A +F +M +GSWN +I+ Y +G A EA L R M D +T+
Sbjct: 200 AVGNARILFDEMPVRD--MGSWNAMISGYCQSGNAKEALTLSNGLRAM-------DSVTV 250
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 176
+ + +C E G +IH Y I+ G+E ++ L+DLY++F + +K+F+R+
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
+D + +N ++ Y N+ P+ AI++F EM + P+ ++L S +S L DIR RS+
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370
Query: 237 HGYVLRH-QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
G+ LR ++ + I N ++ YAK G + AR VFN + + D++SW ++I+GY +G
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430
Query: 296 IDEAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 354
EAI ++ +++ E + + T +S+L A SQ G L ++H + ++ V
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
SL Y KCG+L A LF Q+ WN ++ + HG+ + + LF M +KP
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D +TF ++L+ACSHSGLV+EG F M +Y I P HY C++D+ RAGQL A
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610
Query: 475 VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRW 534
+KSM ++ LLSACR++G+ ++G+ ++ + ++EP + +VL+SN+ A G+W
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670
Query: 535 DEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
+ V IR++ K L+ TPG+S +E+D + EV
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEV 702
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 13/352 (3%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
K +H ++ ++ LV+LY +V AR F+ ++N+D +N+M++GY +
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 193 DLPVEAINVFH-EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
E I F M+ ++P+ F +++ A + D IH L+ ++ V +
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYV 187
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
A +IH Y++ + AR++F+ M RD+ SW +MI+GY G+ EA+ L L+
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR---- 243
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMA 369
+DSVT++SLL A ++ G + +H +Y HG EL V+N LI YA+ G+L
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIH--SYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 370 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
+ +F +M R L SWN+++ AY ++ + LF M+L I+PD LT S+ + S
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 481
G + + +R+ + N ++ + ++ G + A + +P+T
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 13/253 (5%)
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
+++ A+ +H ++ + I V I+ ++++ Y G + AR F+ +++RD+ +W MI+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 289 GYVHHGHIDEAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAV--KEVHCLTYRAF 345
GY G+ E I F L L D T S+L+A C + + ++HCL +
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA-----CRTVIDGNKIHCLALKFG 180
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
++ V SLI Y++ + AR LF +M R + SWNAM+ Y GN E L L N
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
++ D +T S+L+AC+ +G G+ I I+ + + N +IDL +
Sbjct: 241 GLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEF 295
Query: 466 GQLTEAYNLVKSM 478
G+L + + M
Sbjct: 296 GRLRDCQKVFDRM 308
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 306/556 (55%), Gaps = 4/556 (0%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
L P+ TL SL+ A + G+L G+ +H Y + GF ++I E LL++Y KC ++ A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI-EGALLNLYAKCADIETA 443
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
F + + + WN ++ AY +F +FRQM +++P+ T + + +C
Sbjct: 444 LDYFLETEVENVVL--WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
L L G+ IH +I+ + + C+ L+D+Y+K + A + R KD V +
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M+ GY + + +A+ F +M+ + + N +SA + L+ ++ + IH
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+ + + N ++ Y++CG ++ + L F + + D ++W ++++G+ G+ +EA+ +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ RE + ++ T S ++A S+ + K+VH + + + E V N+LI+ YAKCG
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
++ A F +++ + SWNA++ AY+ HG +E L F+ M N++P+ +T +L+
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
ACSH GLV++G+ F SM EY + P HY C++D+L+RAG L+ A ++ MP +
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 485 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
TLLSAC ++ + EIGE A +L+LEP +S++YVL+SN+ A +WD R
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKM 921
Query: 545 KDKELKSTPGYSLIEL 560
K+K +K PG S IE+
Sbjct: 922 KEKGVKKEPGQSWIEV 937
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 233/481 (48%), Gaps = 13/481 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKL-GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC 59
++++ + PN TL LL K GSL EGR +H ++ G + L D Y
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLD-SNGCLSEKLFDFYLFK 133
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A VF +M T+ +WN +I E F LF +M+ V P+ T +
Sbjct: 134 GDLYGAFKVFDEM--PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 120 AILSC----AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 174
+ +C D + + IH ++ G+ V C L+DLYS+ V AR++F+ L
Sbjct: 192 VLEACRGGSVAFDVV---EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
R KD + M++G KN+ EAI +F +M + + P F +++SA + + +
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 294
+HG VL+ + + + N ++ Y G L A +F+ M RD V++ ++I G G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 295 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 354
+ ++A+ LF+ + + L DS TL SL+ A S G L +++H T + +
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
+L+ YAKC + A F + + WN ML AY + + ++F M++ I P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
++ T+ SIL C G +E G QI +I+ + V + +ID+ ++ G+L A+++
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV-CSVLIDMYAKLGKLDTAWDI 547
Query: 475 V 475
+
Sbjct: 548 L 548
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 231/510 (45%), Gaps = 21/510 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEG--RAIHGYAIRRGFG----VCDEIFETTLLD 54
M + + PN T +L A + GS+ IH + +G VC+ L+D
Sbjct: 177 MVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCN-----PLID 230
Query: 55 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 114
+Y + G V +A VF + + SW +I+ N EA LF M ++P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHS--SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 115 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 173
++ + +C +++ L G+ +HG ++++G D C ALV LY ++ A +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 174 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+ +DAV YN ++ G + +A+ +F M + P+ +L+ A S +
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
+ +H Y + + + +I +++ YAKC ++ A F ++V W M+ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
+ + +FR +Q E + + T S+L+ +LG L +++H + V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
+ LI YAK GKL+ A + + + + SW M+ Y + + L F M I+
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 414 PDELTFTSILTACSHSGLVEEGLQIF-RSMIREYTI-VPGEVHYNCIIDLLSRAGQLTEA 471
DE+ T+ ++AC+ ++EG QI ++ + ++ +P + N ++ L SR G++ E+
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ---NALVTLYSRCGKIEES 645
Query: 472 YNLVKSMPSTHSSAALCTLLSACRLYGDTE 501
Y L + A L+S + G+ E
Sbjct: 646 Y-LAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 4/226 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D+ + + V L + + A A L +L+EG+ IH A GF D F+ L+ +Y +CG
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS-SDLPFQNALVTLYSRCG 640
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ + F + A +WN L++ + +G EA +F +M + + T +A
Sbjct: 641 KIEESYLAFEQTEAGDNI--AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ + +E + GK +H + + G + + C AL+ +Y+K ++ A K F + K+
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
V +N ++ Y K+ EA++ F +MI +V PN + ++SA S
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 328 bits (840), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/570 (34%), Positives = 311/570 (54%), Gaps = 19/570 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + P + T +L A A L ++ +G+ IH + F D T L+D Y KCG
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFAT-DMYVCTALVDFYAKCG 152
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLAN 119
++MA VF +M +WN +I+ + + + LF M L P+L T+
Sbjct: 153 ELEMAIKVFDEMPKRDMV--AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD 178
+ L GK++HGY RMG D+V T ++D+Y+K + AR++F+ K+
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN-----LISAVSDLRDIRLA 233
V ++ M+ GY++N++ EA VF +M+ V+ NVA+ ++ + D+
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQML---VNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
R +H Y ++ +I + + N II YAK G L A F+ + +D++S+ S+ITG V +
Sbjct: 328 RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVN 387
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL--S 351
+E+ LF ++ +R D TL+ +L A S L L H Y HG + S
Sbjct: 388 CRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH--GYCVVHGYAVNTS 445
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
+ N+L+ Y KCGKL++A+ +F M +R + SWN ML + +HG E L LFN M+
Sbjct: 446 ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETG 505
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTE 470
+ PDE+T +IL+ACSHSGLV+EG Q+F SM R ++ ++P HYNC+ DLL+RAG L E
Sbjct: 506 VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDE 565
Query: 471 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAE 530
AY+ V MP L TLLSAC Y + E+G ++K++ L + S VL+SN +
Sbjct: 566 AYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSA 624
Query: 531 GGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
RW++ A IR + K + L TPGYS +++
Sbjct: 625 AERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 241/474 (50%), Gaps = 13/474 (2%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 72
+SLL + +L G+ IH + ++R + L +Y C V++A VF ++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 73 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 132
+W+ +I AY N A +A +L+ +M++ V P T + +CA L +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 191
GK IH ++ DM CTALVD Y+K ++ A K+F+ + +D V +N M++G+
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 192 NDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+ + I +F +M ++ +SPN++ + + A+ +R +++HGY R + +
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA-IILFRLLQRE 309
+ I+ YAK + YAR VF+ ++ V+W++MI GYV + I EA + F++L +
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 310 NLRIDSVTLISL-LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 368
N+ + + I L L ++ G LS + VHC +A +L+V N++I+ YAK G L
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCD 361
Query: 369 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
A F ++ + + S+N+++ ++ E +LF+ M+ I+PD T +LTACSH
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHY----NCIIDLLSRAGQLTEAYNLVKSM 478
+ G S Y +V G N ++D+ ++ G+L A + +M
Sbjct: 422 LAALGHG-----SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM 470
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 323/596 (54%), Gaps = 41/596 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + P++ T L A AK + G IHG ++ G+ D + +L+ Y +CG
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK-DLFVQNSLVHFYAECG 183
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLAN 119
+ A VF +M + V SW +I Y A +A +LF +M+ +V P+ +T+
Sbjct: 184 ELDSARKVFDEM--SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD 178
I +CA+L+ L G+ ++ ++ G+E + + +ALVD+Y K + + A+++F+ +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ N M + Y++ L EA+ VF+ M+ V P+ L+ IS+ S LR+I +S HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID- 297
YVLR+ + + I N +I Y KC A +F+RM ++ +V+W S++ GYV +G +D
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 298 ------------------------------EAIILFRLLQ-RENLRIDSVTLISLLQALS 326
EAI +F +Q +E + D VT++S+ A
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSV--NNSLITTYAKCGKLNMARYLFQQMTERCLTSW 384
LG L K ++ Y +G +L V +L+ +++CG A +F +T R +++W
Sbjct: 482 HLGALDLAKWIY--YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
A +GA AM GN ++LF+ M +KPD + F LTACSH GLV++G +IF SM++
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 504
+ + P +VHY C++DLL RAG L EA L++ MP + +LL+ACR+ G+ E+
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 505 AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
A++I L P + SYVL+SN+ A GRW+++A +R K+K L+ PG S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 182/363 (50%), Gaps = 6/363 (1%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N LI Y +G EA LF +M++ + PD T + +CA+ +G IHG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+MG D+ +LV Y++ ++ ARK+F+ + ++ V + M+ GY + D +A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 201 VFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 259
+F M++ V+PN + +ISA + L D+ ++ ++ + + ++ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
KC + A+ +F+ + +L +M + YV G EA+ +F L+ +R D ++++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
S + + SQL + K H R ++ N+LI Y KC + + A +F +M+ +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
+ +WN+++ Y +G + F M NI +++ +I++ L EE +++F
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVF 457
Query: 440 RSM 442
SM
Sbjct: 458 CSM 460
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 166/320 (51%), Gaps = 17/320 (5%)
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV----DLYSKFDVTKARKMFERL 174
+++ +C +D L K H + + G++ D+ T LV +L ++ ++ A+++FE
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 175 RN-KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+ +YN ++ GY + L EAI +F M+ +SP+ F +SA + R
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
IHG +++ Y + + N ++H YA+CG L AR VF+ M R++VSWTSMI GY
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 294 GHIDEAI-ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+A+ + FR+++ E + +SVT++ ++ A ++L L ++V Y + V
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV----YAFIRNSGIEV 269
Query: 353 NN----SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
N+ +L+ Y KC +++A+ LF + L NAM Y G E L +FN M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 409 LGNIKPDELTFTSILTACSH 428
++PD ++ S +++CS
Sbjct: 330 DSGVRPDRISMLSAISSCSQ 349
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 309/554 (55%), Gaps = 10/554 (1%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 75
++ + A + SL+EG+ IH I+ GF V D +L+ +Y K G A VF +M
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSLISLYMKLGCAWDAEKVFEEM--P 192
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
+ SWN +I+ YL G + LF++M+ PD + +A+ +C+ + GK
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 136 IHGYMIRMGVEP-DMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 193
IH + +R +E D++ T+++D+YSK+ +V+ A ++F + ++ V +NVM+ Y +N
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNG 312
Query: 194 LPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
+A F +M + + + P+V +NL+ A + L R+IHGY +R ++ + +
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLE 368
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
+I Y +CG L+ A ++F+RM ++++SW S+I YV +G A+ LF+ L +L
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
DS T+ S+L A ++ LS +E+H ++ + + NSL+ YA CG L AR
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 432
F + + + SWN+++ AYA+HG + LF+ M + P++ TF S+L ACS SG+V
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 433 EEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLS 492
+EG + F SM REY I PG HY C++DL+ R G + A ++ MP ++ +LL+
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLN 608
Query: 493 ACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKST 552
A R + D I E A+QI K+E N+ YVL+ N+ AE GRW++V I+ + + K + T
Sbjct: 609 ASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRT 668
Query: 553 PGYSLIELDKQREV 566
S +E + V
Sbjct: 669 SSRSTVEAKGKSHV 682
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 10/410 (2%)
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A +F +MN + WN +I + G +EA + + +M+ V D T I S
Sbjct: 83 ALQLFDEMNKADAFL--WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDAVIYN 183
A + L GK IH +I++G D+ C +L+ LY K A K+FE + +D V +N
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
M++GYL ++ +F EM+K P+ ++ + A S + ++ + IH + +R
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 244 QYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ T V + I+ Y+K G + YA +FN M R++V+W MI Y +G + +A +
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 303 FRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
F+ + +N L+ D +T I+LL A + L + +H R + + +LI Y
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYG 376
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
+CG+L A +F +M E+ + SWN+++ AY +G L+LF + ++ PD T S
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 422 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
IL A + S + EG +I +++ + N ++ + + G L +A
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDA 485
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 174/324 (53%), Gaps = 8/324 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+R + +S L A + + S + G+ IH +A+R D + T++LDMY K G V A
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAE 126
+F M + +WN +I Y NG+ +AF F++M + L PD++T N + + A
Sbjct: 289 IFNGM--IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI 346
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 185
L+ G++IHGY +R G P MV TAL+D+Y + K A +F+R+ K+ + +N +
Sbjct: 347 LE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSI 402
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ Y++N A+ +F E+ S+ P+ +++ A ++ + R IH Y+++ +Y
Sbjct: 403 IAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY 462
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
+ I N ++H YA CG L+ AR FN + +D+VSW S+I Y HG ++ LF
Sbjct: 463 WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSE 522
Query: 306 LQRENLRIDSVTLISLLQALSQLG 329
+ + + T SLL A S G
Sbjct: 523 MIASRVNPNKSTFASLLAACSISG 546
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 240 VLRHQYITRVEIAN----QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
VLR +Y ++ + + + +A ++ A +F+ M D W MI G+ G
Sbjct: 51 VLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGL 110
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 355
EA+ + + ++ D+ T ++++++ + L K++H + + ++ V NS
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNS 170
Query: 356 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
LI+ Y K G A +F++M ER + SWN+M+ Y G+ L LF M KPD
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 416 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNL 474
+ S L ACSH + G +I +R I G+V I+D+ S+ G+++ A +
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 475 VKSM 478
M
Sbjct: 290 FNGM 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ D L P+ T+ S+L A A+ SL EGR IH Y ++ + + I +L+ MY CG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW-SNTIILNSLVHMYAMCG 480
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A F + V SWN +I AY +G + LF +MI +V P+ T A+
Sbjct: 481 DLEDARKCFNHI--LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 121 ILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFDVTKARKMF 171
+ +C+ + G M R G++P + ++DL + A K F
Sbjct: 539 LAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 296/558 (53%), Gaps = 8/558 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T + AA +L S++ G +HG +R FG D+ + LL MY G V+MA
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR-DKYVQNALLAMYMNFGKVEMARD 173
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF M + V SWN +I+ Y NG +A +F M++ V D T+ + + C L
Sbjct: 174 VFDVMK--NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHL 231
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 186
L G+++H + + + ALV++Y K + +AR +F+R+ +D + + M+
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY ++ A+ + M V PN +L+S D + + +HG+ +R Q
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ + I +I YAKC + VF+ W+++I G V + + +A+ LF+ +
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
+RE++ + TL SLL A + L L +HC + L L+ Y+KCG L
Sbjct: 412 RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL 471
Query: 367 NMARYLFQQMTERCLTS----WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
A +F + E+ + W A++ Y MHG+ L++F M + P+E+TFTS
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
L ACSHSGLVEEGL +FR M+ Y + HY CI+DLL RAG+L EAYNL+ ++P
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 542
+S LL+AC + + ++GE A ++ +LEP N+ +YVL++NI A GRW ++ +R+
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 543 MTKDKELKSTPGYSLIEL 560
M ++ L+ PG+S IE+
Sbjct: 652 MMENVGLRKKPGHSTIEI 669
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 244/496 (49%), Gaps = 21/496 (4%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 74
SLL+ A S+ + +A+H + I G V I +TL Y CG + A +F +M
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGG-RVSGHIL-STLSVTYALCGHITYARKLFEEMPQ 77
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR--KVLPDLLTLANAILSCAELDYLCH 132
+S S+N +I Y+ G +A +F +M+ K +PD T + EL +
Sbjct: 78 SSLL--SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 191
G +HG ++R D AL+ +Y F V AR +F+ ++N+D + +N M++GY +
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
N +A+ +F M+ SV + A ++++ L+D+ + R++H V + ++E+
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
N +++ Y KCG + AR VF+RM RD+++WT MI GY G ++ A+ L RL+Q E +
Sbjct: 256 KNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV 315
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
R ++VT+ SL+ ++ K +H R ++ + SLI+ YAKC ++++
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFR 375
Query: 372 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 431
+F ++ W+A++ + ++ L LF M+ +++P+ T S+L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 432 VEEGLQIF-----RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
+ + + I + G VH + S+ G L A+ + + H S
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVH------VYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 487 LC---TLLSACRLYGD 499
+ L+S ++GD
Sbjct: 490 VVLWGALISGYGMHGD 505
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 129/248 (52%), Gaps = 8/248 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + + PN VT+ SL+ + +G+ +HG+A+R+ D I ET+L+ MY KC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV-YSDIIIETSLISMYAKCK 368
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V + VF A+ G W+ +IA + N +A LF++M V P++ TL +
Sbjct: 369 RVDLCFRVFS--GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSL 426
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF----ERLR 175
+ + A L L +IH Y+ + G + A T LV +YSK + A K+F E+ +
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
+KD V++ +++GY + A+ VF EM++ V+PN F + ++A S + +
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 236 IHGYVLRH 243
+ ++L H
Sbjct: 547 LFRFMLEH 554
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 10/294 (3%)
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
+V + +L++ + + I +++H +V+ ++ I + + TYA CG++ YAR +F
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLF 72
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI--DSVTLISLLQALSQLGC 330
M L+S+ +I YV G +AI +F + E ++ D T + +A +L
Sbjct: 73 EEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS 132
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
+ VH R++ G++ V N+L+ Y GK+ MAR +F M R + SWN M+
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
Y +G + L +F+ M ++ D T S+L C H +E G + + ++ E +
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGD 251
Query: 451 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 504
N ++++ + G++ EA + M + C + G TE G+
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRD------VITWTCMINGYTEDGD 299
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 305 LLQRENLRIDSVTLI-SLLQALSQLGCLSAVKEVHC--LTYRAFHGKELSVNNSLITTYA 361
+L+R N + SV SLL + +S K +HC +T G LS +L TYA
Sbjct: 4 VLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILS---TLSVTYA 60
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK--PDELTF 419
CG + AR LF++M + L S+N ++ Y G Y + + +F M +K PD T+
Sbjct: 61 LCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTY 120
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREY 446
+ A ++ GL + ++R +
Sbjct: 121 PFVAKAAGELKSMKLGLVVHGRILRSW 147
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/567 (32%), Positives = 301/567 (53%), Gaps = 8/567 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ + + P+ L ++L A + L L+ G+ IH + +R G + D L+D Y KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM-DASLMNVLIDSYVKCG 298
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A +F M + + SW L++ Y N EA ELF M + PD+ ++
Sbjct: 299 RVIAAHKLFNGM--PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ SCA L L G +H Y I+ + D +L+D+Y+K D +T ARK+F+ D
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 180 VIYNVMMTGY--LKNDLPV-EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
V++N M+ GY L + EA+N+F +M + P++ F++L+ A + L + L++ I
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
HG + ++ + + +I Y+ C L+ +RLVF+ M+ +DLV W SM GYV
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
+EA+ LF LQ R D T +++ A L + +E HC + + N+L
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNAL 596
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
+ YAKCG A F R + WN+++ +YA HG + L++ M I+P+
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 476
+TF +L+ACSH+GLVE+GL+ F M+R + I P HY C++ LL RAG+L +A L++
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 477 SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 536
MP+ ++ +LLS C G+ E+ E A+ + +P++S S+ ++SNI A G W E
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTE 775
Query: 537 VAHIRAMTKDKELKSTPGYSLIELDKQ 563
+R K + + PG S I ++K+
Sbjct: 776 AKKVRERMKVEGVVKEPGRSWIGINKE 802
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 213/425 (50%), Gaps = 14/425 (3%)
Query: 10 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 69
R LL A L +HG I G + D L+++Y + GG+ A VF
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLEL-DTYLSNILINLYSRAGGMVYARKVF 102
Query: 70 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLANAILSCAELD 128
KM + SW+ +++A H+G E+ +F + RK P+ L++ I +C+ LD
Sbjct: 103 EKM--PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD 160
Query: 129 YLCHGK----SIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYN 183
G+ + ++++ G + D+ T L+D Y K ++ AR +F+ L K V +
Sbjct: 161 --GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWT 218
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
M++G +K ++ +F+++++ +V P+ + ++SA S L + + IH ++LR+
Sbjct: 219 TMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY 278
Query: 244 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 303
+ N +I +Y KCG + A +FN M +++++SWT++++GY + EA+ LF
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
+ + L+ D S+L + + L L +VH T +A G + V NSLI YAKC
Sbjct: 339 TSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV---LKLFNHMKLGNIKPDELTFT 420
L AR +F + +NAM+ Y+ G E+ L +F M+ I+P LTF
Sbjct: 399 DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFV 458
Query: 421 SILTA 425
S+L A
Sbjct: 459 SLLRA 463
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 177/355 (49%), Gaps = 13/355 (3%)
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 183
A D L + +HG +I G+E D L++LYS+ + ARK+FE++ ++ V ++
Sbjct: 55 ASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWS 114
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKM-SVSPNVALFLNLISAVS--DLRDIRLARSIHGYV 240
M++ + + E++ VF E + SPN + + I A S D R + + ++
Sbjct: 115 TMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFL 174
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
++ + V + +I Y K G + YARLVF+ + + V+WT+MI+G V G ++
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
LF L +N+ D L ++L A S L L K++H R + S+ N LI +Y
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
KCG++ A LF M + + SW +L Y + + E ++LF M +KPD +
Sbjct: 295 VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVP--GEVHY--NCIIDLLSRAGQLTEA 471
SILT+C+ + G Q + YTI G Y N +ID+ ++ LT+A
Sbjct: 355 SILTSCASLHALGFGTQ-----VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 323/596 (54%), Gaps = 41/596 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + P++ T L A AK + G IHG ++ G+ D + +L+ Y +CG
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK-DLFVQNSLVHFYAECG 183
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLAN 119
+ A VF +M + V SW +I Y A +A +LF +M+ +V P+ +T+
Sbjct: 184 ELDSARKVFDEM--SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD 178
I +CA+L+ L G+ ++ ++ G+E + + +ALVD+Y K + + A+++F+ +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ N M + Y++ L EA+ VF+ M+ V P+ L+ IS+ S LR+I +S HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID- 297
YVLR+ + + I N +I Y KC A +F+RM ++ +V+W S++ GYV +G +D
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 298 ------------------------------EAIILFRLLQ-RENLRIDSVTLISLLQALS 326
EAI +F +Q +E + D VT++S+ A
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSV--NNSLITTYAKCGKLNMARYLFQQMTERCLTSW 384
LG L K ++ Y +G +L V +L+ +++CG A +F +T R +++W
Sbjct: 482 HLGALDLAKWIY--YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
A +GA AM GN ++LF+ M +KPD + F LTACSH GLV++G +IF SM++
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 504
+ + P +VHY C++DLL RAG L EA L++ MP + +LL+ACR+ G+ E+
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 505 AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
A++I L P + SYVL+SN+ A GRW+++A +R K+K L+ PG S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 182/363 (50%), Gaps = 6/363 (1%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N LI Y +G EA LF +M++ + PD T + +CA+ +G IHG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+MG D+ +LV Y++ ++ ARK+F+ + ++ V + M+ GY + D +A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 201 VFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 259
+F M++ V+PN + +ISA + L D+ ++ ++ + + ++ Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
KC + A+ +F+ + +L +M + YV G EA+ +F L+ +R D ++++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
S + + SQL + K H R ++ N+LI Y KC + + A +F +M+ +
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
+ +WN+++ Y +G + F M NI +++ +I++ L EE +++F
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVF 457
Query: 440 RSM 442
SM
Sbjct: 458 CSM 460
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 166/320 (51%), Gaps = 17/320 (5%)
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV----DLYSKFDVTKARKMFERL 174
+++ +C +D L K H + + G++ D+ T LV +L ++ ++ A+++FE
Sbjct: 37 SSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 175 RN-KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+ +YN ++ GY + L EAI +F M+ +SP+ F +SA + R
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
IHG +++ Y + + N ++H YA+CG L AR VF+ M R++VSWTSMI GY
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 294 GHIDEAI-ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+A+ + FR+++ E + +SVT++ ++ A ++L L ++V Y + V
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV----YAFIRNSGIEV 269
Query: 353 NN----SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
N+ +L+ Y KC +++A+ LF + L NAM Y G E L +FN M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 409 LGNIKPDELTFTSILTACSH 428
++PD ++ S +++CS
Sbjct: 330 DSGVRPDRISMLSAISSCSQ 349
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 305/554 (55%), Gaps = 7/554 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T +L + L G+ +H + +R G+ + ++ L+ MY KCG VK A
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV-NALITMYVKCGDVKSARL 252
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F +M + SWN +I+ Y NG E ELF M V PDL+TL + I +C L
Sbjct: 253 LFDRM--PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMM 186
G+ IH Y+I G D+ C +L +Y + +A K+F R+ KD V + M+
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
+GY N LP +AI+ + M + SV P+ ++SA + L D+ +H ++ + I
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ V +AN +I+ Y+KC + A +F+ + ++++SWTS+I G + EA+I R +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
+ L+ +++TL + L A +++G L KE+H R G + + N+L+ Y +CG++
Sbjct: 491 -KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
N A F ++ +TSWN +L Y+ G + V++LF+ M ++PDE+TF S+L C
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
S S +V +GL F M +Y + P HY C++DLL RAG+L EA+ ++ MP T A
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
LL+ACR++ ++GE A+ I +L+ ++ Y+L+ N+ A+ G+W EVA +R M K+
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 547 KELKSTPGYSLIEL 560
L G S +E+
Sbjct: 728 NGLTVDAGCSWVEV 741
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 252/486 (51%), Gaps = 7/486 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ+ R+ + V+L+ + +EG ++ A+ + E+ L M+ + G
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL-GNAFLAMFVRFG 143
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLAN 119
+ A VFGKM + + SWN L+ Y G EA L+ +M+ V PD+ T
Sbjct: 144 NLVDAWYVFGKM--SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
+ +C + L GK +H +++R G E D+ AL+ +Y K DV AR +F+R+ +D
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ +N M++GY +N + E + +F M +SV P++ ++ISA L D RL R IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
YV+ + + + N + Y G + A +F+RM +D+VSWT+MI+GY ++ D+
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
AI +R++ +++++ D +T+ ++L A + LG L E+H L +A + V N+LI
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
Y+KC ++ A +F + + + SW +++ ++ E L MK+ ++P+ +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAIT 500
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
T+ L AC+ G + G +I ++R + + N ++D+ R G++ A++ S
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ 559
Query: 479 PSTHSS 484
+S
Sbjct: 560 KKDVTS 565
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 164/372 (44%), Gaps = 49/372 (13%)
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
EA+ + + M ++ V+ + +F+ L+ R ++ L VE+ N +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDS 315
+ + G L A VF +M R+L SW ++ GY G+ DEA+ L+ R+L ++ D
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 316 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 375
T +L+ + L+ KEVH R + ++ V N+LIT Y KCG + AR LF +
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 376 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS-------- 427
M R + SWNAM+ Y +G E L+LF M+ ++ PD +T TS+++AC
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 428 ---------------------------HSGLVEEGLQIFRSMIRE----YTIVPGEVHYN 456
++G E ++F M R+ +T + YN
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 457 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR 516
+ D + + Y ++ + +LSAC GD + G + K +K
Sbjct: 377 FLPD------KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR-- 428
Query: 517 NSSSYVLISNIL 528
SYV+++N L
Sbjct: 429 -LISYVIVANNL 439
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 107/253 (42%), Gaps = 36/253 (14%)
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
G +G ++EA+ L +Q + +D ++L++ +V+ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM- 407
+ + N+ + + + G L A Y+F +M+ER L SWN ++G YA G + E + L++ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 467
+G +KPD TF +L C + G ++ ++R + +V N +I + + G
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDV-VNALITMYVKCGD 246
Query: 468 LTEAYNLVKSMP-----------STHSSAALC-----------------------TLLSA 493
+ A L MP S + +C +++SA
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 494 CRLYGDTEIGEAI 506
C L GD +G I
Sbjct: 307 CELLGDRRLGRDI 319
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 194/567 (34%), Positives = 300/567 (52%), Gaps = 13/567 (2%)
Query: 9 NRVTLVSLLHAAAKLGSLQE------GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
N V LVS A LG+ + GR IH ++ G D T+LL MY KCG V
Sbjct: 266 NSVKLVSTSFTGA-LGACSQSENSGFGRQIHCDVVKMGLHN-DPYVCTSLLSMYSKCGMV 323
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
A VF + + WN ++AAY N A +LF M + VLPD TL+N I
Sbjct: 324 GEAETVFSCVVDKRLEI--WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVI 181
C+ L +GKS+H + + ++ +AL+ LYSK A +F+ + KD V
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKM--SVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+ +++G KN EA+ VF +M S+ P+ + ++ +A + L +R +HG
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+++ + V + + +I Y+KCG + A VF M + ++V+W SMI+ Y + + +
Sbjct: 502 MIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELS 561
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
I LF L+ + + DSV++ S+L A+S L K +H T R + + N+LI
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDM 621
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
Y KCG A +F++M + L +WN M+ Y HG+ L LF+ MK PD++TF
Sbjct: 622 YVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTF 681
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
S+++AC+HSG VEEG IF M ++Y I P HY ++DLL RAG L EAY+ +K+MP
Sbjct: 682 LSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 539
S+ LLSA R + + E+G A+++L++EP S+YV + N+ E G +E A
Sbjct: 742 IEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAK 801
Query: 540 IRAMTKDKELKSTPGYSLIELDKQREV 566
+ + K+K L PG S IE+ + V
Sbjct: 802 LLGLMKEKGLHKQPGCSWIEVSDRTNV 828
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 250/498 (50%), Gaps = 14/498 (2%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
+ + T SLL A + L +L G+ IHG + G+ D T+L++MY KCG + A
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRY-DPFIATSLVNMYVKCGFLDYA 114
Query: 66 AAVFGKMNATSTTVGS-----WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
VF + + + V + WN +I Y + E FR+M+ V PD +L+
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174
Query: 121 I-LSCAELDYL-CHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNK 177
+ + C E ++ GK IHG+M+R ++ D TAL+D+Y KF ++ A ++F + +K
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 178 -DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
+ V++NVM+ G+ + + +++++ SV F + A S + R I
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H V++ + ++ Y+KCG + A VF+ + + L W +M+ Y + +
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
A+ LF ++++++ DS TL +++ S LG + K VH ++ ++ ++L
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESAL 414
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN--IKP 414
+T Y+KCG A +F+ M E+ + +W +++ +G + E LK+F MK + +KP
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 474
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D TS+ AC+ + GLQ+ SMI+ ++ V + +IDL S+ G A +
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG-SSLIDLYSKCGLPEMALKV 533
Query: 475 VKSMPSTHSSAALCTLLS 492
SM ST + A +++S
Sbjct: 534 FTSM-STENMVAWNSMIS 550
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 197/416 (47%), Gaps = 25/416 (6%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLP---DLLTLANAILSCAELDYLCHGKSIH 137
S N I A + G+ L+A L+ + H P + T + + +C+ L L +GK+IH
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 138 GYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN-------KDAVIYNVMMTGY 189
G ++ +G D T+LV++Y K + A ++F+ +D ++N M+ GY
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL--ARSIHGYVLRHQYIT 247
K E + F M+ V P+ ++S + + R + IHG++LR+ T
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ +I Y K G A VF + + ++V W MI G+ G + ++ L+ L
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
+ ++++ S + L A SQ +++HC + + V SL++ Y+KCG +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
A +F + ++ L WNAM+ AYA + L LF M+ ++ PD T +++++ C
Sbjct: 324 GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Query: 427 SHSGLVEEG----LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
S GL G ++F+ I+ + + + ++ L S+ G +AY + KSM
Sbjct: 384 SVLGLYNYGKSVHAELFKRPIQSTSTIE-----SALLTLYSKCGCDPDAYLVFKSM 434
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M Q ++P+ V++ S+L A + SL +G+++HGY +R G D + L+DMY KCG
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI-PSDTHLKNALIDMYVKCG 626
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
K A +F KM S +WN +I Y +G + A LF +M PD +T +
Sbjct: 627 FSKYAENIFKKMQHKSLI--TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSL 684
Query: 121 ILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
I +C ++ GK+I +M + G+EP+M +VDL +
Sbjct: 685 ISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGR 726
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/565 (31%), Positives = 310/565 (54%), Gaps = 8/565 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ Q + P VTL+ +L ++ LQ +H +A+ GF CD ++L++Y KC
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFD-CDIAVMNSMLNLYCKCD 193
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A +F +M SWN +I+ Y G E +L +M + PD T +
Sbjct: 194 HVGDAKDLFDQMEQRDMV--SWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKAR-KMFERLRNKDA 179
+ + L G+ +H +++ G + DM TAL+ +Y K +A ++ E + NKD
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V + VM++G ++ +A+ VF EM++ + +++++ + L L S+HGY
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
VLRH Y N +I YAKCG+L + ++F RM RDLVSW ++I+GY + + +A
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 300 IILFRLLQRENLR-IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
++LF ++ + ++ +DS T++SLLQA S G L K +HC+ R+F V+ +L+
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
Y+KCG L A+ F ++ + + SW ++ Y HG L++++ ++P+ +
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
F ++L++CSH+G+V++GL+IF SM+R++ + P H C++DLL RA ++ +A+ K
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
+ S L +L ACR G TE+ + I + +++L+P ++ YV + + A RWD+V+
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVS 671
Query: 539 HIRAMTKDKELKSTPGYSLIELDKQ 563
+ LK PG+S IE++ +
Sbjct: 672 ESWNQMRSLGLKKLPGWSKIEMNGK 696
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 250/521 (47%), Gaps = 12/521 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M +L P+ T SLL A A L L G +IH + GF D ++L+++Y K G
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFS-SDFYISSSLVNLYAKFG 95
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF +M V W +I Y G EA L +M + + P +TL
Sbjct: 96 LLAHARKVFEEMRERD--VVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEM 153
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ E+ L + +H + + G + D+ ++++LY K D V A+ +F+++ +D
Sbjct: 154 LSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V +N M++GY E + + + M + P+ F +S + D+ + R +H
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+++ + + + +I Y KCG + + V + ++D+V WT MI+G + G ++A
Sbjct: 271 IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKA 330
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+I+F + + + S + S++ + +QLG VH R + + NSLIT
Sbjct: 331 LIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM 390
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP-DELT 418
YAKCG L+ + +F++M ER L SWNA++ YA + + + L LF MK ++ D T
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
S+L ACS +G + G I +IR + I P + ++D+ S+ G L A S+
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK--LEPRN 517
S + L++ +G +I I + L +EP +
Sbjct: 510 -SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 189/390 (48%), Gaps = 9/390 (2%)
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
+G + F M+ K+LPD T + + +CA L L G SIH ++ G D
Sbjct: 24 HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYI 83
Query: 152 CTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 210
++LV+LY+KF + ARK+FE +R +D V + M+ Y + + EA ++ +EM +
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGI 143
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
P L ++S V ++ + + +H + + + + + + N +++ Y KC ++ A+
Sbjct: 144 KPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 271 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 330
+F++M RD+VSW +MI+GY G++ E + L ++ + LR D T + L +
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
L + +HC + ++ + +LIT Y KCGK + + + + + + W M+
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE-YTI- 448
G + L +F+ M S++ +C+ G + G + ++R YT+
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
P N +I + ++ G L ++ + + M
Sbjct: 381 TPA---LNSLITMYAKCGHLDKSLVIFERM 407
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 170/352 (48%), Gaps = 42/352 (11%)
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
+ ++ F M+ + P+ F +L+ A + L+ + SIH VL + + + I++ ++
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
+ YAK G L +AR VF MR RD+V WT+MI Y G + EA L ++ + ++ V
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV 148
Query: 317 TLISLLQA---LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
TL+ +L ++QL CL ++ +++V NS++ Y KC + A+ LF
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDC------DIAVMNSMLNLYCKCDHVGDAKDLF 202
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL----TACS-- 427
QM +R + SWN M+ YA GN +E+LKL M+ ++PD+ TF + L T C
Sbjct: 203 DQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLE 262
Query: 428 -----HSGLVEEGLQIF-----------------RSMIREYTIVPGE--VHYNCIIDLLS 463
H +V+ G + + R +P + V + +I L
Sbjct: 263 MGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 464 RAGQLTEAYNLVKSM---PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 512
R G+ +A + M S SS A+ +++++C G ++G ++ +L+
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 307/555 (55%), Gaps = 11/555 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN TL A + LG+L+EGR +HG+A++ G + ++++ Y K G A
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL-ASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
F ++ + SW +IA+ +G E+F++F +M ++ + PD + ++ I ++
Sbjct: 287 SFRELG--DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKM 344
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLR---NKDAVIYN 183
+ GK+ HG++IR D C +L+ +Y KF++ + A K+F R+ NK+A +N
Sbjct: 345 MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA--WN 402
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
M+ GY K V+ I +F ++ + + + A ++IS+ S + + L +S+H YV++
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT 462
Query: 244 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 303
+ + N +I Y K G L A +F + ++++W +MI YVH ++AI LF
Sbjct: 463 SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQSEKAIALF 521
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
+ EN + S+TL++LL A G L + +H H LS++ +LI YAKC
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKC 581
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
G L +R LF ++ WN M+ Y MHG+ + LF+ M+ ++KP TF ++L
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
+AC+H+GLVE+G ++F M +Y + P HY+C++DLLSR+G L EA + V SMP +
Sbjct: 642 SACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPD 700
Query: 484 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 543
TLLS+C +G+ E+G +A++ + +P+N Y++++N+ + G+W+E R M
Sbjct: 701 GVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
Query: 544 TKDKELKSTPGYSLI 558
++ + G+S++
Sbjct: 761 MRESGVGKRAGHSVV 775
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 197/399 (49%), Gaps = 5/399 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ++ ++P+ V + L++ K+ + +G+A HG+ IR F + D +LL MY K
Sbjct: 322 MQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL-DSTVCNSLLSMYCKFE 380
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ +A +F +++ +WN ++ Y ++ ELFR++ + + D + +
Sbjct: 381 LLSVAEKLFCRISEEGNKE-AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSV 439
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
I SC+ + + GKS+H Y+++ ++ + +L+DLY K D+T A +MF + +
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNV 498
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+ +N M+ Y+ + +AI +F M+ + P+ + L+ A + + + IH Y
Sbjct: 499 ITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+ ++ + ++ +I YAKCG+L+ +R +F+ +D V W MI+GY HG ++ A
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESA 618
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
I LF ++ +++ T ++LL A + G + K++ ++ L + L+
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDL 678
Query: 360 YAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNY 397
++ G L A M W +L + HG +
Sbjct: 679 LSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEF 717
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 204/440 (46%), Gaps = 10/440 (2%)
Query: 42 GVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 100
G+ + IF + L+ Y G +++ VF + T + WN +I A+ NG +
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLV--TRRDIFLWNSIIKAHFSNGDYARSLC 111
Query: 101 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLY 159
F M+ PD T + +CAEL + G +HG +++ G + + + V Y
Sbjct: 112 FFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFY 171
Query: 160 SKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS---PNVA 215
SK + A +F+ + ++D V + +++G+++N + +M PN
Sbjct: 172 SKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 275
A S+L ++ R +HG+ +++ + + + + Y+K G A L F +
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 276 RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 335
D+ SWTS+I G ++E+ +F +Q + + D V + L+ L ++ + K
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Query: 336 EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMH 394
H R + +V NSL++ Y K L++A LF +++E +WN ML Y
Sbjct: 352 AFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM 411
Query: 395 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 454
+ + ++LF ++ I+ D + TS++++CSH G V G + +++ + V
Sbjct: 412 KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV- 470
Query: 455 YNCIIDLLSRAGQLTEAYNL 474
N +IDL + G LT A+ +
Sbjct: 471 VNSLIDLYGKMGDLTVAWRM 490
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 157/339 (46%), Gaps = 10/339 (2%)
Query: 140 MIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
+I G+ ++ + L+ Y+ + + ++F + +D ++N ++ + N +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR-VEIANQIIH 257
+ F M+ SP+ ++SA ++L + +HG VL+H R + ++
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV- 316
Y+KCG+LQ A LVF+ M RD+V+WT++I+G+V +G + + + +D
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 317 --TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 374
TL QA S LG L + +H + V +S+ + Y+K G + A F+
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFR 289
Query: 375 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE 434
++ + + SW +++ + A G+ E +F M+ + PD + + ++ LV +
Sbjct: 290 ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQ 349
Query: 435 GLQIFRSMIR-----EYTIVPGEVHYNCIIDLLSRAGQL 468
G +IR + T+ + C +LLS A +L
Sbjct: 350 GKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
V + LI++YA GK N++ +F +T R + WN+++ A+ +G+YA L F M L
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSG 120
Query: 412 IKPDELTFTSILTACS-----HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
PD T +++AC+ H G GL + T V Y S+ G
Sbjct: 121 QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY-----FYSKCG 175
Query: 467 QLTEAYNLVKSMP 479
L +A + MP
Sbjct: 176 FLQDACLVFDEMP 188
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 290/565 (51%), Gaps = 12/565 (2%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE--IFETTLLDMYHKCGGVK 63
L PN T + AA+ + GR IHG A+ G CD + + ++ MY K V+
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG---CDSELLLGSNIVKMYFKFWRVE 171
Query: 64 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAIL 122
A VF +M T + WN +I+ Y N +E+ ++FR +I+ D TL + +
Sbjct: 172 DARKVFDRMPEKDTIL--WNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVI 181
+ AEL L G IH + G T + LYSK K +F R D V
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
YN M+ GY N ++++F E++ + ++L+ L L +IHGY L
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCL 346
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
+ +++ ++ + Y+K ++ AR +F+ + L SW +MI+GY +G ++AI
Sbjct: 347 KSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
LFR +Q+ + VT+ +L A +QLG LS K VH L + V+ +LI YA
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
KCG + AR LF MT++ +WN M+ Y +HG E L +F M I P +TF
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLC 526
Query: 422 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 481
+L ACSH+GLV+EG +IF SMI Y P HY C++D+L RAG L A +++M
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE 586
Query: 482 HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 541
S+ TLL ACR++ DT + +++++ +L+P N +VL+SNI + + + A +R
Sbjct: 587 PGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVR 646
Query: 542 AMTKDKELKSTPGYSLIELDKQREV 566
K ++L PGY+LIE+ + V
Sbjct: 647 QTAKKRKLAKAPGYTLIEIGETPHV 671
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 151/306 (49%), Gaps = 3/306 (0%)
Query: 130 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTG 188
+ H H +I G D+ T L S + AR +F ++ D ++NV+M G
Sbjct: 33 ISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRG 92
Query: 189 YLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
+ N+ P +++VF + K + + PN + + ISA S RD R R IHG + +
Sbjct: 93 FSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
+ + + I+ Y K ++ AR VF+RM +D + W +MI+GY + E+I +FR L
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 308 REN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
E+ R+D+ TL+ +L A+++L L ++H L + V I+ Y+KCGK+
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
M LF++ + + ++NAM+ Y +G L LF + L + T S++
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 427 SHSGLV 432
H L+
Sbjct: 333 GHLMLI 338
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 39/238 (16%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ PN VT+ +L A A+LG+L G+ +H F + T L+ MY KCG
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV-STALIGMYAKCG 469
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A +F M T +WN +I+ Y +GQ EA +F +M++ + P +T
Sbjct: 470 SIAEARRLFDLM--TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCV 527
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDA 179
+ +C+ + G I MI R G EP + +VD+ +
Sbjct: 528 LYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGR------------------ 569
Query: 180 VIYNVMMTGYLKNDLP-VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
G+L+ L +EA MS+ P +++ L+ A +D LAR++
Sbjct: 570 -------AGHLQRALQFIEA---------MSIEPGSSVWETLLGACRIHKDTNLARTV 611
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 303/560 (54%), Gaps = 6/560 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ TL L A +L + G IHG+ + D ++L+ MY KCG + A
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLANAILSCAE 126
+F ++ + +W+ +++ + NG +A E FR+M+ V PD +TL + +C +
Sbjct: 118 MFDELEKPD--IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK 175
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 185
L G+ +HG++IR G D+ +L++ Y+K K A +F+ + KD + ++ +
Sbjct: 176 LSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ Y++N EA+ VF++M+ PNVA L ++ A + D+ R H +R
Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
T V+++ ++ Y KC + A VF+R+ +D+VSW ++I+G+ +G +I F +
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 306 LQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ EN R D++ ++ +L + S+LG L K H + + SL+ Y++CG
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSIL 423
L A +F + + W +++ Y +HG + L+ FNHM K +KP+E+TF SIL
Sbjct: 416 SLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSIL 475
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
+ACSH+GL+ EGL+IF+ M+ +Y + P HY ++DLL R G L A + K MP + +
Sbjct: 476 SACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT 535
Query: 484 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 543
L TLL ACR++ + E+ E +AK++ +LE ++ Y+L+SN+ G W+ V +R
Sbjct: 536 PQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNS 595
Query: 544 TKDKELKSTPGYSLIELDKQ 563
K + +K SLIE+ ++
Sbjct: 596 VKQRGIKKGLAESLIEIRRK 615
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 212/411 (51%), Gaps = 7/411 (1%)
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A +FG+M T ++ WN L+ + Q E F M + PD TL A+ +C
Sbjct: 13 ARQMFGEM--TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 125 AELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIY 182
EL + +G+ IHG++ + + + D+ ++L+ +Y K + +A +MF+ L D V +
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+ M++G+ KN P +A+ F M+ S V+P+ + L+SA + L + RL R +HG+V+
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
R + + + N +++ YAK + A +F + +D++SW+++I YV +G EA++
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
+F + + + T++ +LQA + L ++ H L R E+ V+ +L+ Y
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL-GNIKPDELTFT 420
KC A +F ++ + + SW A++ + ++G ++ F+ M L N +PD +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
+L +CS G +E+ + F S + +Y +++L SR G L A
Sbjct: 371 KVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 132/266 (49%), Gaps = 20/266 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D PN T++ +L A A L++GR H AIR+G ++ T L+DMY KC
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV-STALVDMYMKCF 313
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLAN 119
+ A AVF ++ V SW LI+ + NG A + E F M + PD + +
Sbjct: 314 SPEEAYAVFSRI--PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
+ SC+EL +L K H Y+I+ G + + +LV+LYS+ + A K+F + KD
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSD----------- 226
V++ ++TGY + +A+ F+ M+K S V PN FL+++SA S
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 227 ---LRDIRLARSIHGYVLRHQYITRV 249
+ D RLA ++ Y + + RV
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRV 517
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 36/219 (16%)
Query: 369 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
AR +F +MT+R L WN +L + + + EVL F+HM KPD T L AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 429 SGLVEEGLQIFRSMIREYTI-------------------------------VPGEVHYNC 457
V G I + ++ T+ P V ++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 458 IIDLLSRAGQLTEAYNLVKSM----PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 513
++ + G +A + M T L TL+SAC ++ +G + +++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 514 EPRNSSSYV-LISNILAEGGRWDEVAHIRAMTKDKELKS 551
N S V + N A+ + E ++ M +K++ S
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVIS 231
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 304/557 (54%), Gaps = 6/557 (1%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
++VT + +L A K+ SL G+ +H A++ G + + +L++MY K A V
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV-SNSLINMYCKLRKFGFARTV 372
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL- 127
F M + + SWN +IA NG +EA LF Q++ + PD T+ + + + + L
Sbjct: 373 FDNM--SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMM 186
+ L K +H + I++ D TAL+D YS+ K A +FER N D V +N MM
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMM 489
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY ++ + + +F M K + + L I + +H Y ++ Y
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ +++ I+ Y KCG + A+ F+ + D V+WT+MI+G + +G + A +F +
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
+ + D T+ +L +A S L L +++H + + V SL+ YAKCG +
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
+ A LF+++ +T+WNAML A HG E L+LF MK IKPD++TF +L+AC
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
SHSGLV E + RSM +Y I P HY+C+ D L RAG + +A NL++SM S++
Sbjct: 730 SHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
TLL+ACR+ GDTE G+ +A ++L+LEP +SS+YVL+SN+ A +WDE+ R M K
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 547 KELKSTPGYSLIELDKQ 563
++K PG+S IE+ +
Sbjct: 850 HKVKKDPGFSWIEVKNK 866
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 236/474 (49%), Gaps = 11/474 (2%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
N ++ YLH+GQ + F M+ V D +T + + ++D L G+ +H ++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 143 MGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
+G++ + +L+++Y K AR +F+ + +D + +N ++ G +N L VEA+ +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 202 FHEMIKMSVSPNVALFLNLISAVSDLRD-IRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
F ++++ + P+ +++ A S L + + L++ +H + ++ ++ ++ +I Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 261 KCGYLQYARLVFNRMRSRDLVSWTSMITGYV--HHGHIDEAIILFRLLQRENLRIDSVTL 318
+ ++ A ++F R + DLV+W +M+ GY H GH + + LF L+ ++ R D TL
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGH--KTLKLFALMHKQGERSDDFTL 520
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
++ + L ++ K+VH ++ + +L V++ ++ Y KCG ++ A++ F +
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+W M+ +G +F+ M+L + PDE T ++ A S +E+G QI
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
+ ++ ++D+ ++ G + +AY L K + + +A L+ + +G
Sbjct: 641 HANALK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ-HG 698
Query: 499 DTEIGEAIAKQI--LKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 550
+ + + KQ+ L ++P + ++S G + H+R+M D +K
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 189/399 (47%), Gaps = 43/399 (10%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQAL-----EAFELFRQ 104
L+ MY KCG + A VF KM + SWN ++AAY + + + +AF LFR
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKM--PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 105 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-D 163
+ V +TL+ + C Y+ +S HGY ++G++ D ALV++Y KF
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
V + + +FE + +D V++N+M+ YL+ EAI++ ++PN + L L++
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN-EITLRLLAR 254
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
+S D A + + + + EI +F R++ L
Sbjct: 255 ISG--DDSDAGQVKSFANGNDASSVSEI-------------------IF---RNKGL--- 287
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
+ Y+H G + F + ++ D VT I +L ++ L+ ++VHC+ +
Sbjct: 288 ----SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
L+V+NSLI Y K K AR +F M+ER L SWN+++ A +G E + L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
F + +KPD+ T TS+L A S + EGL + + +
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQV 439
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 214/497 (43%), Gaps = 38/497 (7%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
+Y +R+TL +L G + + HGYA + G DE L+++Y K G VK
Sbjct: 141 VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD-GDEFVAGALVNIYLKFGKVKEG 199
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M + WN ++ AYL G EA +L + P+ +TL
Sbjct: 200 KVLFEEMPYRDVVL--WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR------- 250
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVM 185
L + S G + D + + ++ RNK
Sbjct: 251 LLARISGDDSDAGQVKSFANGNDASSVSEII-----------------FRNKG------- 286
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
++ YL + + F +M++ V + F+ +++ + + L + +H L+
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
+ ++N +I+ Y K +AR VF+ M RDL+SW S+I G +G EA+ LF
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 306 LQRENLRIDSVTLISLLQALSQLG-CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
L R L+ D T+ S+L+A S L LS K+VH + + + V+ +LI Y++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
+ A LF++ L +WNAM+ Y + + LKLF M + D+ T ++
Sbjct: 467 CMKEAEILFERHNFD-LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
C + +G Q+ I+ + V + I+D+ + G ++ A S+P
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIP-VPDD 583
Query: 485 AALCTLLSACRLYGDTE 501
A T++S C G+ E
Sbjct: 584 VAWTTMISGCIENGEEE 600
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
D+ L + H +L + + N +I Y+KCG L YAR VF++M RDLVSW S++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 289 GYVHHG-----HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
Y +I +A +LFR+L+++ + +TL +L+ G + A + H +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 344 -AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
G E V +L+ Y K GK+ + LF++M R + WN ML AY G E +
Sbjct: 174 IGLDGDEF-VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 403 LFNHMKLGNIKPDELTF 419
L + + P+E+T
Sbjct: 233 LSSAFHSSGLNPNEITL 249
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T+ +L A++ L +L++GR IH A++ D T+L+DMY KCG + A
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLN-CTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F ++ + T +WN ++ +G+ E +LF+QM + PD +T + +C+
Sbjct: 675 LFKRIEMMNIT--AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Query: 128 DYLC----HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLR-NKDAVI 181
+ H +S+HG G++P++ + L D + + K A + E + A +
Sbjct: 733 GLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSV--SPNVALFLNLISAVSDLRDIRLARS-IHG 238
Y ++ V +++++ S L N+ +A S +++LAR+ + G
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 239 Y-VLRHQYITRVEIANQI 255
+ V + + +E+ N+I
Sbjct: 850 HKVKKDPGFSWIEVKNKI 867
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 139/320 (43%), Gaps = 56/320 (17%)
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR 175
L NAI S L GK H ++ P+ L+ +YSK +T AR++F+++
Sbjct: 46 LRNAITSSD----LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 176 NKDAVIYNVMMTGYLKN-DLPVEAIN-------VFHEMI----KMSVSPNVALFLNLISA 223
++D V +N ++ Y ++ + VE I + + + +M++SP + L L+ S
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLH--SG 159
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
+ + S HGY + +A +++ Y K G ++ +++F M RD+V W
Sbjct: 160 Y-----VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
M+ Y+ G +EAI L L + +TL LL +S G S +V
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL-RLLARIS--GDDSDAGQVKSFA-- 269
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
+G + S +++ +F+ N L Y G Y+ +LK
Sbjct: 270 --NGNDAS---------------SVSEIIFR----------NKGLSEYLHSGQYSALLKC 302
Query: 404 FNHMKLGNIKPDELTFTSIL 423
F M +++ D++TF +L
Sbjct: 303 FADMVESDVECDQVTFILML 322
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/562 (31%), Positives = 309/562 (54%), Gaps = 8/562 (1%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
+ T SLL A L+ G H I++ + L+DMY KCG ++ A +
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK-NLFVGNALVDMYAKCGALEDARQI 485
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F +M +WN +I +Y+ + EAF+LF++M ++ D LA+ + +C +
Sbjct: 486 FERMCDRDNV--TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMT 187
L GK +H ++ G++ D+ ++L+D+YSK + K ARK+F L V N ++
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
GY +N+L EA+ +F EM+ V+P+ F ++ A + L HG + + + +
Sbjct: 604 GYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS 662
Query: 248 RVE-IANQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEAIILFRL 305
E + ++ Y + A +F+ + S + +V WT M++G+ +G +EA+ ++
Sbjct: 663 EGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKE 722
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
++ + + D T +++L+ S L L + +H L + H + +N+LI YAKCG
Sbjct: 723 MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGD 782
Query: 366 LNMARYLFQQMTERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
+ + +F +M R + SWN+++ YA +G + LK+F+ M+ +I PDE+TF +LT
Sbjct: 783 MKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
ACSH+G V +G +IF MI +Y I H C++DLL R G L EA + +++ +
Sbjct: 843 ACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDA 902
Query: 485 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
+LL ACR++GD GE A+++++LEP+NSS+YVL+SNI A G W++ +R +
Sbjct: 903 RLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVM 962
Query: 545 KDKELKSTPGYSLIELDKQREV 566
+D+ +K PGYS I+++++ +
Sbjct: 963 RDRGVKKVPGYSWIDVEQRTHI 984
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 228/478 (47%), Gaps = 7/478 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG-VCDEIFETTLLDMYHKCGGVKMAA 66
PN V L K G +E A+ + R G D + T+++ Y + G +K A
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEE--AVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+FG+M +S V +WN +I+ + G A E F M V TL + + +
Sbjct: 282 LLFGEM--SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 185
+ L G +H I++G+ ++ ++LV +YSK + + A K+FE L K+ V +N M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ GY N + + +F +M + + F +L+S + D+ + H +++ +
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
+ + N ++ YAKCG L+ AR +F RM RD V+W ++I YV + EA LF+
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ + D L S L+A + + L K+VHCL+ + ++L +SLI Y+KCG
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
+ AR +F + E + S NA++ Y+ + N E + LF M + P E+TF +I+ A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
C + G Q + + GE ++ + + +TEA L + S S
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 220/455 (48%), Gaps = 41/455 (9%)
Query: 25 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 84
+L+ G+A+H ++ G + ++D+Y KC V A F + V +WN
Sbjct: 75 ALRIGKAVHSKSLILGID-SEGRLGNAIVDLYAKCAQVSYAEKQF---DFLEKDVTAWNS 130
Query: 85 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 144
+++ Y G+ + F + ++ P+ T + + +CA + G+ IH MI+MG
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 145 VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 203
+E + ALVD+Y+K D ++ AR++FE + + + V + + +GY+K LP EA+ VF
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
M P+ F+ +I+TY + G
Sbjct: 251 RMRDEGHRPDHLAFVT-----------------------------------VINTYIRLG 275
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 323
L+ ARL+F M S D+V+W MI+G+ G AI F +++ +++ TL S+L
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 324 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 383
A+ + L VH + + V +SL++ Y+KC K+ A +F+ + E+
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 443
WNAM+ YA +G +V++LF MK D+ TFTS+L+ C+ S +E G Q F S+I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSII 454
Query: 444 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ + N ++D+ ++ G L +A + + M
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 214/478 (44%), Gaps = 40/478 (8%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
+ +++PN+ T +L A+ +++ GR IH I+ G + L+DMY KC +
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER-NSYCGGALVDMYAKCDRI 211
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
A VF + +T W L + Y+ G EA +F +M PD L I
Sbjct: 212 SDARRVFEWIVDPNTVC--WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI- 268
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIY 182
IR+G D AR +F + + D V +
Sbjct: 269 ---------------NTYIRLGKLKD------------------ARLLFGEMSSPDVVAW 295
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
NVM++G+ K AI F M K SV + +++SA+ + ++ L +H ++
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ + + + ++ Y+KC ++ A VF + ++ V W +MI GY H+G + + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 362
F ++ ID T SLL + L + H + + K L V N+L+ YAK
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
CG L AR +F++M +R +WN ++G+Y N +E LF M L I D S
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAST 535
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNLVKSMP 479
L AC+H + +G Q+ ++ + ++H + +ID+ S+ G + +A + S+P
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVK--CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 159/328 (48%), Gaps = 8/328 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ +T +++ A K SL G HG +RGF E +LL MY G+ A A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F ++++ + V W +++ + NG EA + +++M H VLPD T + C+ L
Sbjct: 687 LFSELSSPKSIV-LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVL 745
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI-YNVM 185
L G++IH + + + D + L+D+Y+K D+ + ++F+ +R + V+ +N +
Sbjct: 746 SSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ GY KN +A+ +F M + + P+ FL +++A S + R I ++
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYG 865
Query: 246 I-TRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITG-YVHHGHIDEAIIL 302
I RV+ ++ + GYLQ A + + D W+S++ +H I I
Sbjct: 866 IEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISA 925
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGC 330
+L++ E + L+S + A SQ GC
Sbjct: 926 EKLIELEPQNSSAYVLLSNIYA-SQ-GC 951
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + P++ T V++L + L SL+EGRAIH + DE+ TL+DMY KCG
Sbjct: 723 MRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL-DELTSNTLIDMYAKCG 781
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+K ++ VF +M S V SWN LI Y NG A +A ++F M ++PD +T
Sbjct: 782 DMKGSSQVFDEMRRRSNVV-SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEP--DMVACTALVDLYSKFDVTKARKMFERLRN- 176
+ +C+ + G+ I MI + G+E D VAC +VDL ++ + F +N
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC--MVDLLGRWGYLQEADDFIEAQNL 898
Query: 177 -KDAVIYNVMM 186
DA +++ ++
Sbjct: 899 KPDARLWSSLL 909
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
+R+ +++H L + + N I+ YAKC + YA F+ + +D+ +W SM++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
Y G + + F L + + T +L ++ + +++HC + +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 350 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
+L+ YAKC +++ AR +F+ + + W + Y G E + +F M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 410 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 469
+PD L F +++ G +++ +F M P V +N +I + G T
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCET 309
Query: 470 EA----YNLVK-SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 513
A +N+ K S+ ST S+ L ++LSA + + ++G + + +KL
Sbjct: 310 VAIEYFFNMRKSSVKSTRST--LGSVLSAIGIVANLDLGLVVHAEAIKL 356
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 305/566 (53%), Gaps = 10/566 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ++ PN T + L A+ G G +H ++ G + +L+++Y KCG
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV-SNSLINLYLKCG 243
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V+ A +F K S V +WN +I+ Y NG LEA +F M V + A+
Sbjct: 244 NVRKARILFDKTEVKS--VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDA 179
I CA L L + +H +++ G D TAL+ YSK A ++F+ +
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 180 VI-YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V+ + M++G+L+ND EA+++F EM + V PN + +++A+ + +H
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHA 417
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
V++ Y + ++ Y K G ++ A VF+ + +D+V+W++M+ GY G +
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQL-GCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
AI +F L + ++ + T S+L + + K+ H ++ L V+++L+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
T YAK G + A +F++ E+ L SWN+M+ YA HG + L +F MK +K D +
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
TF + AC+H+GLVEEG + F M+R+ I P + H +C++DL SRAGQL +A ++++
Sbjct: 598 TFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN 657
Query: 478 MPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 537
MP+ S T+L+ACR++ TE+G A++I+ ++P +S++YVL+SN+ AE G W E
Sbjct: 658 MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQER 717
Query: 538 AHIRAMTKDKELKSTPGYSLIELDKQ 563
A +R + ++ +K PGYS IE+ +
Sbjct: 718 AKVRKLMNERNVKKEPGYSWIEVKNK 743
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 215/416 (51%), Gaps = 11/416 (2%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFGKMN 73
S+L +A L GR +H I+ FG D++ T+L+D Y K K VF +M
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIK--FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
V +W LI+ Y N E LF +M + P+ T A A+ AE G
Sbjct: 156 --ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
+H +++ G++ + +L++LY K +V KAR +F++ K V +N M++GY N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
L +EA+ +F+ M V + + F ++I ++L+++R +H V+++ ++ I
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
++ Y+KC + A +F + ++VSWT+MI+G++ + +EA+ LF ++R+ +
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
R + T +L AL + + EVH + + + +V +L+ Y K GK+ A
Sbjct: 394 RPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 372 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
+F + ++ + +W+AML YA G +K+F + G IKP+E TF+SIL C+
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 138/262 (52%)
Query: 167 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
A +F++ +D Y ++ G+ ++ EA +F + ++ + + ++F +++ +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 286
L D R +H ++ ++ V + ++ TY K + R VF+ M+ R++V+WT++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 287 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 346
I+GY + DE + LF +Q E + +S T + L L++ G +VH + +
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
K + V+NSLI Y KCG + AR LF + + + +WN+M+ YA +G E L +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 407 MKLGNIKPDELTFTSILTACSH 428
M+L ++ E +F S++ C++
Sbjct: 286 MRLNYVRLSESSFASVIKLCAN 307
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 252 ANQIIHTYAKC-GYLQYARL-----VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
AN + C G + +RL +F++ RD S+ S++ G+ G EA LF
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN 83
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ R + +D S+L+ + L +++HC + ++SV SL+ TY K
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSN 143
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
R +F +M ER + +W ++ YA + EVL LF M+ +P+ TF + L
Sbjct: 144 FKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGV 203
Query: 426 CSHSGLVEEGLQIFRSMIRE--YTIVPGEVHYNCIIDLLSRAGQLTEA 471
+ G+ GLQ+ +++ +P N +I+L + G + +A
Sbjct: 204 LAEEGVGGRGLQVHTVVVKNGLDKTIPVS---NSLINLYLKCGNVRKA 248
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 304/559 (54%), Gaps = 7/559 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T +++ A LG GR IH ++ G+ VCD + ++L+ MY K + +
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGY-VCDVVVASSLVGMYAKFNLFENSLQ 163
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M V SWN +I+ + +G+A +A ELF +M P+ ++L AI +C+ L
Sbjct: 164 VFDEM--PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRL 221
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMM 186
+L GK IH ++ G E D +ALVD+Y K D + AR++F+++ K V +N M+
Sbjct: 222 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY+ + + + MI P+ +++ A S R++ + IHGYV+R
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ + +I Y KCG A VF++ + SW MI+ Y+ G+ +A+ ++ +
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKELSVNNSLITTYAKCGK 365
++ D VT S+L A SQL L K++H ++ EL ++ +L+ Y+KCG
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS-ALLDMYSKCGN 460
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
A +F + ++ + SW M+ AY HG E L F+ M+ +KPD +T ++L+A
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
C H+GL++EGL+ F M +Y I P HY+C+ID+L RAG+L EAY +++ P T +A
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 580
Query: 486 A-LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
L TL SAC L+ + +G+ IA+ +++ P ++S+Y+++ N+ A G WD +R
Sbjct: 581 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 640
Query: 545 KDKELKSTPGYSLIELDKQ 563
K+ L+ PG S IE+ +
Sbjct: 641 KEMGLRKKPGCSWIEMSDK 659
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 221/437 (50%), Gaps = 4/437 (0%)
Query: 45 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
D + +L+++Y C A VF + S V WN L++ Y N + E+F++
Sbjct: 38 DVVLCKSLINVYFTCKDHCSARHVFENFDIRSD-VYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 105 MIHRKV-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 163
+++ + +PD T N I + L G+ IH +++ G D+V ++LV +Y+KF+
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 164 V-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
+ + ++F+ + +D +N +++ + ++ +A+ +F M PN IS
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
A S L + + IH ++ + + + ++ Y KC L+ AR VF +M + LV+
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
W SMI GYV G + + + E R TL S+L A S+ L K +H
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI 336
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
R+ ++ VN SLI Y KCG+ N+A +F + + SWN M+ +Y GN+ + ++
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVE 396
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
+++ M +KPD +TFTS+L ACS +E+G QI S I E + E+ + ++D+
Sbjct: 397 VYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMY 455
Query: 463 SRAGQLTEAYNLVKSMP 479
S+ G EA+ + S+P
Sbjct: 456 SKCGNEKEAFRIFNSIP 472
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 201/391 (51%), Gaps = 10/391 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ PN V+L + A ++L L+ G+ IH +++GF + DE + L+DMY KC
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL-DEYVNSALVDMYGKCD 257
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+++A VF KM S +WN +I Y+ G + E+ +MI P TL +
Sbjct: 258 CLEVAREVFQKMPRKSLV--AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSI 315
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+++C+ L HGK IHGY+IR V D+ +L+DLY K + A +F + + A
Sbjct: 316 LMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVA 375
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+NVM++ Y+ +A+ V+ +M+ + V P+V F +++ A S L + + IH
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+ + T + + ++ Y+KCG + A +FN + +D+VSWT MI+ Y HG EA
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREA 495
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLI 357
+ F +Q+ L+ D VTL+++L A G + + R+ +G E + + +I
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS-QMRSKYGIEPIIEHYSCMI 554
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAML 388
+ G+L A + QQ E TS NA L
Sbjct: 555 DILGRAGRLLEAYEIIQQTPE---TSDNAEL 582
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 184/558 (32%), Positives = 316/558 (56%), Gaps = 17/558 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN TLV ++HA L +G IHGY IR GF + + ++L MY + A
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSV-QNSILCMYADSDSLS-ARK 180
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAE 126
+F +M + V SW+ +I +Y+ + + + +LF++M+H K PD +T+ + + +C
Sbjct: 181 LFDEM--SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 127 LDYLCHGKSIHGYMIRMGVE-PDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNV 184
++ + G+S+HG+ IR G + D+ C +L+D+YSK FDV A ++F+ ++ V +N
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++ G++ N EA+ +FH M++ +V + ++L+ +SIHG ++R
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
Y + + +I Y C + A V + M +D+VS ++MI+G H G DEAI +F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLITTYAKC 363
++ +++T+ISLL A S L K H + R + ++SV S++ YAKC
Sbjct: 419 HMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 475
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
G + MAR F Q+TE+ + SW ++ AYA++G + L LF+ MK P+ +T+ + L
Sbjct: 476 GAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAAL 535
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS--T 481
+AC+H GLV++GL IF+SM+ E P HY+CI+D+LSRAG++ A L+K++P
Sbjct: 536 SACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVK 594
Query: 482 HSSAALCTLLSACR-LYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 540
++A +LS CR + I + ++L+LEP SS Y+L S+ A W++VA +
Sbjct: 595 AGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMM 654
Query: 541 RAMTKDKELKSTPGYSLI 558
R + K+++++ GYS++
Sbjct: 655 RRLVKERKVRVVAGYSMV 672
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 204/395 (51%), Gaps = 10/395 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ + + P+ VT+ S+L A + + GR++HG++IRRGF + D +L+DMY K
Sbjct: 217 VHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGF 276
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A VF + T + SWN ++A ++HN + EA E+F M+ V D +T+ +
Sbjct: 277 DVDSAFRVFDE--TTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL 334
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ C + KSIHG +IR G E + VA ++L+D Y+ V A + + + KD
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDV 394
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V + M++G EAI++F M +PN ++L++A S D+R ++ HG
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIF---CHMRDTPNAITVISLLNACSVSADLRTSKWAHGI 451
Query: 240 VLRHQY-ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+R I + + I+ YAKCG ++ AR F+++ ++++SWT +I+ Y +G D+
Sbjct: 452 AIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDK 511
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
A+ LF ++++ ++VT ++ L A + G + + H L + ++
Sbjct: 512 ALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVD 571
Query: 359 TYAKCGKLNMARYLFQQMTERC---LTSWNAMLGA 390
++ G+++ A L + + E ++W A+L
Sbjct: 572 MLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 201/474 (42%), Gaps = 71/474 (14%)
Query: 64 MAAAVFGKMNATSTTV------GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
M + + K+ A S+ + G W +++ Y +A F D
Sbjct: 1 MGSHLCSKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFN------------DPFVF 48
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNK 177
+CA+L +L G SI + ++ G D+ + F+ + ++
Sbjct: 49 PIVFKACAKLSWLFQGNSIADFYMKCG------------------DLCSGLREFDCMNSR 90
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
D+V +NV++ G L E + F ++ PN + + +I A L IH
Sbjct: 91 DSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIH 148
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 297
GYV+R + + N I+ YA L AR +F+ M RD++SW+ +I YV
Sbjct: 149 GYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPV 207
Query: 298 EAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY-RAFHGKELSVNNS 355
+ LF+ ++ D VT+ S+L+A + + + + VH + R F ++ V NS
Sbjct: 208 VGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNS 267
Query: 356 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
LI Y+K ++ A +F + T R + SWN++L + + Y E L++F+ M ++ D
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVD 327
Query: 416 ELTFTSILTACS-----------HSGLVEEGLQ----IFRSMIREYT------------- 447
E+T S+L C H ++ G + S+I YT
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD 387
Query: 448 --IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 499
V + +I L+ AG+ EA ++ M T ++ + +LL+AC + D
Sbjct: 388 SMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSAD 441
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 289/519 (55%), Gaps = 6/519 (1%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
T L+ G + A VF + + WN +I Y N +A ++ M +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDL--PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 110 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKAR 168
V PD T + + +C+ L +L G+ +H + R+G + D+ L+ LY+K + AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 169 KMFE--RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
+FE L + V + +++ Y +N P+EA+ +F +M KM V P+ +++++A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 286
L+D++ RSIH V++ ++ + YAKCG + A+++F++M+S +L+ W +M
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 287 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 346
I+GY +G+ EAI +F + +++R D++++ S + A +Q+G L + ++ R+ +
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
++ ++++LI +AKCG + AR +F + +R + W+AM+ Y +HG E + L+
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M+ G + P+++TF +L AC+HSG+V EG F M ++ I P + HY C+IDLL RAG
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAG 473
Query: 467 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 526
L +AY ++K MP LLSAC+ + E+GE A+Q+ ++P N+ YV +SN
Sbjct: 474 HLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSN 533
Query: 527 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQRE 565
+ A WD VA +R K+K L G S +E+ + E
Sbjct: 534 LYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 217/410 (52%), Gaps = 18/410 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ R+ P+ T LL A + L LQ GR +H R GF D + L+ +Y KC
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA-DVFVQNGLIALYAKCR 168
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF + T+ SW +++AY NG+ +EA E+F QM V PD + L +
Sbjct: 169 RLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSV 228
Query: 121 ILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
+ + L L G+SIH +++MG +EPD++ +L +Y+K V A+ +F+++++
Sbjct: 229 LNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL--ISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
+ +++N M++GY KN EAI++FHEMI V P+ + ISA + + + ARS++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 297
YV R Y V I++ +I +AKCG ++ ARLVF+R RD+V W++MI GY HG
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK---ELSVNN 354
EAI L+R ++R + + VT + LL A + G V+E R K +
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSG---MVREGWWFFNRMADHKINPQQQHYA 463
Query: 355 SLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMH-----GNYA 398
+I + G L+ A + + M + +T W A+L A H G YA
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 302/570 (52%), Gaps = 13/570 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ PN T + A A+L + +H + I+ F D T +DM+ KC
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFW-SDVFVGTATVDMFVKCN 101
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V AA VF +M T +WN +++ + +G +AF LFR+M ++ PD +T+
Sbjct: 102 SVDYAAKVFERMPERDAT--TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL 159
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD- 178
I S + L +++H IR+GV+ + + Y K D+ A+ +FE + D
Sbjct: 160 IQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDR 219
Query: 179 -AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
V +N M Y +A ++ M++ P+++ F+NL ++ + + R IH
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 297
+ + +E N I Y+K ARL+F+ M SR VSWT MI+GY G +D
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA-FHG---KELSVN 353
EA+ LF + + + D VTL+SL+ + G L K + RA +G + +
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA---RADIYGCKRDNVMIC 396
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
N+LI Y+KCG ++ AR +F E+ + +W M+ YA++G + E LKLF+ M + K
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 473
P+ +TF ++L AC+HSG +E+G + F M + Y I PG HY+C++DLL R G+L EA
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 474 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 533
L+++M + + LL+AC+++ + +I E A+ + LEP+ ++ YV ++NI A G
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGM 576
Query: 534 WDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
WD A IR++ K + +K PG S+I+++ +
Sbjct: 577 WDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 202/411 (49%), Gaps = 13/411 (3%)
Query: 77 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 136
++V +WN I ++ +E+ LFR+M P+ T +CA L + + +
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 137 HGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 195
H ++I+ D+ TA VD++ K + V A K+FER+ +DA +N M++G+ ++
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 196 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQI 255
+A ++F EM ++P+ + LI + S + ++L ++H +R +V +AN
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 256 IHTYAKCGYLQYARLVFNRMR--SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 313
I TY KCG L A+LVF + R +VSW SM Y G +A L+ L+ RE +
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
D T I+L + L+ + +H +++ N+ I+ Y+K AR LF
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
MT R SW M+ YA G+ E L LF+ M KPD +T S+++ C G +E
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 434 EGLQI-FRSMI----REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
G I R+ I R+ ++ N +ID+ S+ G + EA ++ + P
Sbjct: 375 TGKWIDARADIYGCKRDNVMI-----CNALIDMYSKCGSIHEARDIFDNTP 420
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 35/360 (9%)
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+N+ + + + PVE++ +F EM + PN F + A + L D+ +H +++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
+ + + V + + + KC + YA VF RM RD +W +M++G+ GH D+A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
LFR ++ + DSVT+++L+Q+ S L ++ +H + R +++V N+ I+TY
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 362 KCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
KCG L+ A+ +F+ + +R + SWN+M AY++ G + L+ M KPD TF
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 420 TSILTACSHSGLVEEG------------------LQIFRSMIRE----------YTIVPG 451
++ +C + + +G + F SM + + I+
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 452 E--VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL---SACRLYGDTEIGEAI 506
V + +I + G + EA L +M + L TLL S C +G E G+ I
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 176/553 (31%), Positives = 304/553 (54%), Gaps = 10/553 (1%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N T+ S++ A + + E +H + + GF + D L+ MY K G + ++ V
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYL-DSSVAAALISMYSKSGDIDLSEQV 408
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F ++ N +I ++ + + +A LF +M+ + D ++ + + + LD
Sbjct: 409 FEDLDDIQRQ-NIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLD 464
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 187
L GK +HGY ++ G+ D+ ++L LYSK + ++ K+F+ + KD + M++
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
G+ + EAI +F EM+ SP+ + +++ S + + IHGY LR
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
+++ + +++ Y+KCG L+ AR V++R+ D VS +S+I+GY HG I + +LFR +
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Query: 308 RENLRIDSVTLISLLQA--LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+DS + S+L+A LS L A +VH + E SV +SL+T Y+K G
Sbjct: 645 MSGFTMDSFAISSILKAAALSDESSLGA--QVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
++ F Q+ L +W A++ +YA HG E L+++N MK KPD++TF +L+A
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
CSH GLVEE SM+++Y I P HY C++D L R+G+L EA + + +M +
Sbjct: 763 CSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL 822
Query: 486 ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 545
TLL+AC+++G+ E+G+ AK+ ++LEP ++ +Y+ +SNILAE G WDEV R + K
Sbjct: 823 VWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMK 882
Query: 546 DKELKSTPGYSLI 558
++ PG+S +
Sbjct: 883 GTGVQKEPGWSSV 895
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 228/485 (47%), Gaps = 14/485 (2%)
Query: 18 HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST 77
+ ++L +L+ + + + +RR D +LL Y G + AA +F +
Sbjct: 56 QSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTI--PQP 113
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 137
V S N +I+ Y + E+ F +M + ++ + I +C+ L + +
Sbjct: 114 DVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVC 173
Query: 138 GYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 196
+ I+MG V +AL+D++SK A K+F + + +N ++ G L+N
Sbjct: 174 CHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG 233
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
++FHEM P+ + ++++A + L +R + + V++ V + I+
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIV 292
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
YAKCG++ A VF+R+ + +VSWT M++GY A+ +F+ ++ + I++
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352
Query: 317 TLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 376
T+ S++ A + + +VH +++ + SV +LI+ Y+K G ++++ +F+ +
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 377 TE-RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA--CSHSGLVE 433
+ + N M+ +++ + ++LF M ++ DE + S+L+ C + G
Sbjct: 413 DDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQV 472
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
G + ++ + T+ + + L S+ G L E+Y L + +P +A +++S
Sbjct: 473 HGYTLKSGLVLDLTVG------SSLFTLYSKCGSLEESYKLFQGIP-FKDNACWASMISG 525
Query: 494 CRLYG 498
YG
Sbjct: 526 FNEYG 530
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 161/354 (45%), Gaps = 35/354 (9%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D P+ TL ++L + SL G+ IHGY +R G ++ + L++MY KCG
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL-GSALVNMYSKCG 600
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+K+A V+ ++ S + LI+ Y +G + F LFR M+ D +++
Sbjct: 601 SLKLARQVYDRLPELDPV--SCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ + A D G +H Y+ ++G+ + ++L+ +YSKF + K F ++ D
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+ + ++ Y ++ EA+ V++ M + P+ F+ ++SA S HG
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-----------HGG 767
Query: 240 VLRHQYI--------TRVEIANQ----IIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSM 286
++ Y +E N+ ++ + G L+ A N M + D + W ++
Sbjct: 768 LVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL 827
Query: 287 ITGYVHHGHIDEAIILFRLLQRENLRI---DSVTLISLLQALSQLGCLSAVKEV 337
+ HG ++ L ++ ++ + + D+ ISL L+++G V+E
Sbjct: 828 LAACKIHGEVE----LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEET 877
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 297/562 (52%), Gaps = 11/562 (1%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC-GGVKM 64
L PN +++ A + + GR G+ ++ G D +L+DM+ K +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF KM + V +W +I + G EA F M+ D TL++ +C
Sbjct: 222 AYKVFDKM--SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD----VTKARKMFERLRNKDAV 180
AEL+ L GK +H + IR G+ D V C+ LVD+Y+K V RK+F+R+ + +
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDD-VECS-LVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 181 IYNVMMTGYLKN-DLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ ++TGY+KN +L EAIN+F EMI V PN F + A +L D R+ + + G
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+ + +AN +I + K ++ A+ F + ++LVS+ + + G + + ++
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
A L + L + + T SLL ++ +G + +++H + V N+LI+
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
Y+KCG ++ A +F M R + SW +M+ +A HG VL+ FN M +KP+E+T
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ +IL+ACSH GLV EG + F SM ++ I P HY C++DLL RAG LT+A+ + +M
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
P T L ACR++ +TE+G+ A++IL+L+P ++Y+ +SNI A G+W+E
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEEST 697
Query: 539 HIRAMTKDKELKSTPGYSLIEL 560
+R K++ L G S IE+
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEV 719
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/558 (23%), Positives = 266/558 (47%), Gaps = 26/558 (4%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV-CDEIFETTLLDMYHKCGGVKMAAA 67
+ VT SLL + + + G+ +H I F + D + +L+ +Y K G A
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIE--FDIEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 68 VFGKMNATST-TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
VF M V SW+ ++A Y +NG+ L+A ++F + + ++P+ I +C+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 127 LDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKFD--VTKARKMFERLRNKDAVIYN 183
D++ G+ G++++ G E D+ +L+D++ K + A K+F+++ + V +
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
+M+T ++ P EAI F +M+ + ++ SA ++L ++ L + +H + +R
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 244 QYITRVEIANQIIHTYAKC---GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI-DEA 299
+ VE + ++ YAKC G + R VF+RM ++SWT++ITGY+ + ++ EA
Sbjct: 299 GLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 300 IILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
I LF ++ + ++ + T S +A L K+V ++ SV NS+I+
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVIS 416
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
+ K ++ A+ F+ ++E+ L S+N L + N+ + KL + + + T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
F S+L+ ++ G + +G QI S + + + + N +I + S+ G + A + M
Sbjct: 477 FASLLSGVANVGSIRKGEQI-HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLI------SNILAEGG 532
+ + + + + + E + I + N +YV I +++EG
Sbjct: 536 ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
Query: 533 RWDEVAHIRAMTKDKELK 550
R H +M +D ++K
Sbjct: 596 R-----HFNSMYEDHKIK 608
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 214/485 (44%), Gaps = 47/485 (9%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCH 132
+ S + + LI +L+ G A M + P D +T ++ + SC
Sbjct: 21 SVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRL 80
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR---NKDAVIYNVMMTG 188
GK +H +I +EPD V +L+ LYSK D KA +FE +R +D V ++ MM
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR-HQYIT 247
Y N ++AI VF E +++ + PN + +I A S+ + + R G++++ + +
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 248 RVEIANQIIHTYAKC-GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
V + +I + K + A VF++M ++V+WT MIT + G EAI F +
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC--- 363
D TL S+ A ++L LS K++H R+ G V SL+ YAKC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS--GLVDDVECSLVDMYAKCSAD 318
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA-EVLKLFNHM-KLGNIKPDELTFTS 421
G ++ R +F +M + + SW A++ Y + N A E + LF+ M G+++P+ TF+S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 422 ILTACSHSGLVEEGLQI----FRSMIREYTIVPGE------------------------- 452
AC + G Q+ F+ + + V
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 453 -VHYNCIIDLLSRAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIGEAIAK 508
V YN +D R +A+ L+ + S+ +LLS G GE I
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 509 QILKL 513
Q++KL
Sbjct: 499 QVVKL 503
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 294/542 (54%), Gaps = 10/542 (1%)
Query: 26 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 85
L++GR +HG+ I G L++MY KCG + A VF M + SWN +
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV--SWNSM 386
Query: 86 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 145
I NG +EA E ++ M +LP TL +++ SCA L + G+ IHG +++G+
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 146 EPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND--LPVEAINVF 202
+ ++ AL+ LY++ + + RK+F + D V +N ++ +++ LP EA+ F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP-EAVVCF 505
Query: 203 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 262
+ N F +++SAVS L L + IHG L++ N +I Y KC
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKC 565
Query: 263 GYLQYARLVFNRM-RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 321
G + +F+RM RD V+W SMI+GY+H+ + +A+ L + + R+DS ++
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 322 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL 381
L A + + L EVH + RA ++ V ++L+ Y+KCG+L+ A F M R
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 382 TSWNAMLGAYAMHGNYAEVLKLFNHMKL-GNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
SWN+M+ YA HG E LKLF MKL G PD +TF +L+ACSH+GL+EEG + F
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA-CRLYG- 498
SM Y + P H++C+ D+L RAG+L + + ++ MP + T+L A CR G
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 805
Query: 499 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
E+G+ A+ + +LEP N+ +YVL+ N+ A GGRW+++ R KD ++K GYS +
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Query: 559 EL 560
+
Sbjct: 866 TM 867
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 242/506 (47%), Gaps = 18/506 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQ--EGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 58
M + ++ N+ VS+L A ++GS+ GR IHG + + V D + L+ MY K
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV-DAVVSNVLISMYWK 151
Query: 59 C-GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
C G V A FG + ++ SWN +I+ Y G AF +F M + P T
Sbjct: 152 CIGSVGYALCAFGDIEVKNSV--SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 118 ANAI---LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 173
+ + S E D + I + + G+ D+ + LV ++K ++ ARK+F +
Sbjct: 210 GSLVTTACSLTEPDVRLL-EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 174 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM-SVSP-NVALFLNLISAVSDLRDIR 231
+ ++AV N +M G ++ EA +F +M M VSP + + L+ S ++
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 232 L--ARSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
L R +HG+V+ + V I N +++ YAKCG + AR VF M +D VSW SMIT
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
G +G EA+ ++ ++R ++ S TLIS L + + L +++H + +
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA-MHGNYAEVLKLFNHM 407
+SV+N+L+T YA+ G LN R +F M E SWN+++GA A + E + F +
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 467
+ K + +TF+S+L+A S E G QI + + I N +I + G+
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGE 567
Query: 468 LTEAYNLVKSMPSTHSSAALCTLLSA 493
+ + M + +++S
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 205/459 (44%), Gaps = 23/459 (5%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
L++ Y + G A VF +M + SW +++ Y NG+ EA R M+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCV--SWACIVSGYSRNGEHKEALVFLRDMVKEG 97
Query: 110 VLPDLLTLANAILSCAELDY--LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF--DVT 165
+ + + + +C E+ + G+ IHG M ++ D V L+ +Y K V
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 166 KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
A F + K++V +N +++ Y + A +F M P F +L++
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Query: 226 DLR--DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
L D+RL I + + +T + + + ++ +AK G L YAR VFN+M +R+ V+
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
++ G V +EA LF + N ID V+ S + LS S +EV R
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDM---NSMID-VSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 344 AFHGKELS---------VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
HG ++ + N L+ YAKCG + AR +F MT++ SWN+M+ +
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 395 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 454
G + E ++ + M+ +I P T S L++C+ + G QI ++ + V
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
N ++ L + G L E + SMP H + +++ A
Sbjct: 454 -NALMTLYAETGYLNECRKIFSSMPE-HDQVSWNSIIGA 490
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 7/335 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + P TL+S L + A L + G+ IHG +++ G + + L+ +Y + G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV-SNALMTLYAETG 464
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQAL-EAFELFRQMIHRKVLPDLLTLAN 119
+ +F M SWN +I A + ++L EA F + +T ++
Sbjct: 465 YLNECRKIFSSMPEHDQV--SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL-RNK 177
+ + + L + GK IHG ++ + + AL+ Y K ++ K+F R+ +
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
D V +N M++GY+ N+L +A+++ M++ + ++ ++SA + + + +H
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 297
+R + V + + ++ Y+KCG L YA FN M R+ SW SMI+GY HG +
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 298 EAIILFRLLQRE-NLRIDSVTLISLLQALSQLGCL 331
EA+ LF ++ + D VT + +L A S G L
Sbjct: 703 EALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
AR H + +++ V + N +I+ Y + G AR VF+ M R+ VSW +++GY
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV--KEVHCLTYRAFHGKEL 350
+G EA++ R + +E + + +S+L+A ++G + + +++H L ++ + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 351 SVNNSLITTYAKC-GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
V+N LI+ Y KC G + A F + + SWN+++ Y+ G+ ++F+ M+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 410 GNIKPDELTFTSIL-TACSHSGLVEEGLQIFRSM---IREYTIVPGEVHYNCIIDLLSRA 465
+P E TF S++ TACS L E +++ + I++ ++ + ++ +++
Sbjct: 200 DGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 466 GQLTEAYNLVKSMPSTHS 483
G L+ A + M + ++
Sbjct: 257 GSLSYARKVFNQMETRNA 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 94/232 (40%), Gaps = 46/232 (19%)
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
+S +Q S +G A + H Y+ K++ + N+LI Y + G AR +F +M
Sbjct: 7 LSFVQ--SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE--EGL 436
R SW ++ Y+ +G + E L M I ++ F S+L AC G V G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 437 QIFRSMIR-EYTI------------------------------VPGEVHYNCIIDLLSRA 465
QI M + Y + V V +N II + S+A
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 466 GQLTEAYNLVKSM------PSTHSSAALCTLLSACRLYGDTEIGEAIAKQIL 511
G A+ + SM P+ ++ +L T +AC L TE + +QI+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVT--TACSL---TEPDVRLLEQIM 231
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 297/558 (53%), Gaps = 10/558 (1%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N T ++ L A+ G+ IHG+ +R+GF T+L++MY KCG ++ A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
FG + V +N LI+ ++ NG L+A E +R+M +LPD T ++L ++
Sbjct: 119 FG---GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFP-SLLKGSDAM 174
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD-AVIYNVMM 186
L K +HG ++G + D + LV YSKF V A+K+F+ L ++D +V++N ++
Sbjct: 175 ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY + +A+ VF +M + V + +++SA + DI RSIHG ++
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG 294
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ + ++N +I Y K +L+ A +F M RDL +W S++ + + G D + LF +
Sbjct: 295 SDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERM 354
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELS---VNNSLITTYAK 362
+R D VTL ++L +L L +E+H + ++ S ++NSL+ Y K
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
CG L AR +F M + SWN M+ Y + L +F+ M +KPDE+TF +
Sbjct: 415 CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGL 474
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
L ACSHSG + EG M Y I+P HY C+ID+L RA +L EAY L S P
Sbjct: 475 LQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICD 534
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 542
+ ++LS+CRL+G+ ++ K++ +LEP + YVL+SN+ E G+++EV +R
Sbjct: 535 NPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRD 594
Query: 543 MTKDKELKSTPGYSLIEL 560
+ + +K TPG S I L
Sbjct: 595 AMRQQNVKKTPGCSWIVL 612
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+++ + +R T+ S+L A G + GR+IHG A++ G G D + L+DMY K
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG-SDIVVSNALIDMYGKSK 311
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A ++F M+ + +WN ++ + + G LF +M+ + PD++TL
Sbjct: 312 WLEEANSIFEAMDERD--LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTV 369
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGV----EPDMVACTALVDLYSKF-DVTKARKMFERLR 175
+ +C L L G+ IHGYMI G+ + +L+D+Y K D+ AR +F+ +R
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
KD+ +N+M+ GY A+++F M + V P+ F+ L+ A S
Sbjct: 430 VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACS 479
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF---GVCDEIFETTLLDMYHKCGGVKM 64
P+ VTL ++L +L SL++GR IHGY I G +E +L+DMY KCG ++
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF M + SWN +I Y A ++F M V PD +T + +C
Sbjct: 421 ARMVFDSMRVKDSA--SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 478
Query: 125 AELDYLCHGKSIHGYM 140
+ +L G++ M
Sbjct: 479 SHSGFLNEGRNFLAQM 494
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 304/565 (53%), Gaps = 7/565 (1%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
D P+ TLV++L A+ + G+ +HG+A++ + + L+DMY KCG +
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK-ELVLNNALMDMYSKCGCI 343
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI--HRKVLPDLLTLANA 120
A +F KMN V SWN ++ + G F++ RQM+ V D +T+ NA
Sbjct: 344 TNAQMIF-KMNNNKNVV-SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ C +L K +H Y ++ + + A V Y+K ++ A+++F +R+K
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+N ++ G+ +++ P +++ +M + P+ +L+SA S L+ +RL + +HG+
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
++R+ + + ++ Y CG L + +F+ M + LVSW ++ITGY+ +G D A
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 581
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ +FR + +++ ++++ + A S L L +E H + + + SLI
Sbjct: 582 LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
YAK G + + +F + E+ SWNAM+ Y +HG E +KLF M+ PD+LTF
Sbjct: 642 YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
+LTAC+HSGL+ EGL+ M + + P HY C+ID+L RAGQL +A +V
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 480 STHSSAALC-TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
S + + +LLS+CR++ + E+GE +A ++ +LEP +YVL+SN+ A G+W++V
Sbjct: 762 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVR 821
Query: 539 HIRAMTKDKELKSTPGYSLIELDKQ 563
+R + L+ G S IEL+++
Sbjct: 822 KVRQRMNEMSLRKDAGCSWIELNRK 846
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 223/446 (50%), Gaps = 12/446 (2%)
Query: 10 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 69
R L LL A+ K ++ GR IH D++ T ++ MY CG + VF
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 70 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELD 128
+ S + WN +I++Y N E E F +MI +LPD T I +CA +
Sbjct: 144 DALR--SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMT 187
+ G ++HG +++ G+ D+ ALV Y VT A ++F+ + ++ V +N M+
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 188 GYLKNDLPVEAINVFHEMIKM----SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
+ N E+ + EM++ + P+VA + ++ + R+I L + +HG+ ++
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 244 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 303
+ + + N ++ Y+KCG + A+++F ++++VSW +M+ G+ G +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 304 R--LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLITTY 360
R L E+++ D VT+++ + L ++KE+HC + + F EL V N+ + +Y
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANAFVASY 440
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AKCG L+ A+ +F + + + SWNA++G +A + L MK+ + PD T
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 421 SILTACSHSGLVEEGLQIFRSMIREY 446
S+L+ACS + G ++ +IR +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNW 526
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ L P+ T+ SLL A +KL SL+ G+ +HG+ IR D ++L +Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER-DLFVYLSVLSLYIHCG 545
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A+F M S SWN +I YL NG A +FRQM+ + +++
Sbjct: 546 ELCTVQALFDAMEDKSLV--SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDA 179
+C+ L L G+ H Y ++ +E D +L+D+Y+K +T++ K+F L+ K
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+N M+ GY + L EAI +F EM + +P+ FL +++A
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/575 (30%), Positives = 308/575 (53%), Gaps = 43/575 (7%)
Query: 25 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDM--YHKCGGVKMAAAVFGKMNATSTTVGSW 82
SL++ + HG+ IR G D + L M ++ A VF ++ ++ +W
Sbjct: 42 SLRQLKQTHGHMIRTG-TFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF--AW 98
Query: 83 NPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
N LI AY + + F M+ + P+ T I + AE+ L G+S+HG +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 142 RMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+ V D+ +L+ Y S D+ A K+F ++ KD V +N M+ G+++ P +A+
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
+F +M V + + ++SA + +R++ R + Y+ ++ + +AN ++ Y
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 261 KCGYLQYARLVFNRMRSRDLVSWTSMITGYV----------------------------- 291
KCG ++ A+ +F+ M +D V+WT+M+ GY
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 292 --HHGHIDEAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
+G +EA+I+F LQ ++N++++ +TL+S L A +Q+G L + +H +Y HG
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH--SYIKKHGI 396
Query: 349 ELS--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
++ V ++LI Y+KCG L +R +F + +R + W+AM+G AMHG E + +F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M+ N+KP+ +TFT++ ACSH+GLV+E +F M Y IVP E HY CI+D+L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 467 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 526
L +A +++MP S++ LL AC+++ + + E ++L+LEPRN ++VL+SN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 527 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
I A+ G+W+ V+ +R + LK PG S IE+D
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 206/438 (47%), Gaps = 52/438 (11%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ + + YPN+ T L+ AAA++ SL G+++HG A++ G D +L+ Y CG
Sbjct: 122 VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG-SDVFVANSLIHCYFSCG 180
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF + V SWN +I ++ G +A ELF++M V +T+
Sbjct: 181 DLDSACKVFTTIK--EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGV 238
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FDVTK---- 166
+ +CA++ L G+ + Y+ V ++ A++D+Y+K FD +
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 167 ------------------ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM-IK 207
AR++ + KD V +N +++ Y +N P EA+ VFHE+ ++
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 208 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 267
++ N ++ +SA + + + L R IH Y+ +H + + +IH Y+KCG L+
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
+R VFN + RD+ W++MI G HG +EA+ +F +Q N++ + VT ++ A S
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVN--------NSLITTYAKCGKLNMARYLFQQMTER 379
G + + + FH E + ++ + G L A + M
Sbjct: 479 TGLVDEAESL-------FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 380 CLTS-WNAMLGAYAMHGN 396
TS W A+LGA +H N
Sbjct: 532 PSTSVWGALLGACKIHAN 549
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 316/606 (52%), Gaps = 71/606 (11%)
Query: 30 RAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATS-----------T 77
R +H I+ GF +EIF + L+D Y KCG ++ VF KM + T
Sbjct: 40 RYVHASVIKSGFS--NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 78 TVG------------------SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
+G +WN +++ + + + EA F M + + + A+
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
+ +C+ L+ + G +H + + D+ +ALVD+YSK +V A+++F+ + +++
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V +N ++T + +N VEA++VF M++ V P+ ++ISA + L I++ + +HG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 239 YVLRHQYI-TRVEIANQIIHTYAKC--------------------------GY-----LQ 266
V+++ + + ++N + YAKC GY +
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
ARL+F +M R++VSW ++I GY +G +EA+ LF LL+RE++ + ++L+A +
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 327 QLGCLSAVKEVHC------LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
L L + H +++ ++ V NSLI Y KCG + +F++M ER
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
SWNAM+ +A +G E L+LF M KPD +T +L+AC H+G VEEG F
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 500
SM R++ + P HY C++DLL RAG L EA ++++ MP S +LL+AC+++ +
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 501 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
+G+ +A+++L++EP NS YVL+SN+ AE G+W++V ++R + + + PG S I++
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 561 DKQREV 566
V
Sbjct: 638 QGHDHV 643
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 52/341 (15%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + R+ P+ VTL S++ A A L +++ G+ +HG ++ D I +DMY KC
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 61 GVKMAAAVFGKMN----------------ATST-------------TVGSWNPLIAAYLH 91
+K A +F M A ST V SWN LIA Y
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI------HGYMIRMGV 145
NG+ EA LF + V P + AN + +CA+L L G HG+ + G
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 146 EPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
E D+ +L+D+Y K V + +F ++ +D V +N M+ G+ +N EA+ +F E
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 205 MIKMSVSPNVALFLNLISAVSDLRDIR--------LARSIHGYVLRHQYITRVEIANQII 256
M++ P+ + ++SA + + R LR Y V++
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL----- 538
Query: 257 HTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHI 296
+ G+L+ A+ + M + D V W S++ H +I
Sbjct: 539 --LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 185/600 (30%), Positives = 320/600 (53%), Gaps = 44/600 (7%)
Query: 8 PNRVTLVSLLHAAAKLG---SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 64
PN T+ ++L A + + + GR IH Y ++R + +L+ Y + G ++
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE 281
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILS 123
AA++F +M S + SWN +IA Y N + +AF+LF ++H+ V PD +T+ + +
Sbjct: 282 AASLFTRMG--SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPV 339
Query: 124 CAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 181
CA+L L GK IH Y++R + D AL+ Y++F D + A F + KD +
Sbjct: 340 CAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS 399
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+N ++ + + + +N+ H ++ +++ + L+L+ +++ I + +HGY +
Sbjct: 400 WNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSV 459
Query: 242 RHQYITRVE---IANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID 297
+ + E + N ++ YAKCG ++YA +F + R LVS+ S+++GYV+ G D
Sbjct: 460 KAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 298 -------------------------------EAIILFRLLQRENLRIDSVTLISLLQALS 326
EAI +FR +Q +R ++VT+++LL +
Sbjct: 520 DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCA 579
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNA 386
QL L V++ H R G ++ + +L+ YAKCG L A +FQ R L + A
Sbjct: 580 QLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTA 638
Query: 387 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 446
M+ YA+HG E L +++HM NIKPD + T++LTAC H+GL+++GLQI+ S+ +
Sbjct: 639 MVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVH 698
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAI 506
+ P Y C +DL++R G+L +AY+ V MP ++ TLL AC Y ++G ++
Sbjct: 699 GMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSV 758
Query: 507 AKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
A +L+ E ++ ++VLISN+ A +W+ V +R + K KE+K G S +E+D QR V
Sbjct: 759 ANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNV 818
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 252/500 (50%), Gaps = 31/500 (6%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 72
+ ++ A A + L GRA+HG + G C E+ ++L+MY KC + +F +M
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEV-SKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 73 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLANAILSCAELDYLC 131
++ V WN ++ L E F+ M + P +T A + C L
Sbjct: 83 DSLDPVV--WNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV--TKARKMFERLRNKDAVIYNVMMTGY 189
+GKS+H Y+I+ G+E D + ALV +Y+KF A F+ + +KD V +N ++ G+
Sbjct: 140 NGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL-RDI--RLARSIHGYVLRHQYI 246
+N++ +A F M+K PN A N++ + + ++I R R IH YV++ ++
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 247 -TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-R 304
T V + N ++ Y + G ++ A +F RM S+DLVSW +I GY + +A LF
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLITTYAKC 363
L+ + ++ DSVT+IS+L +QL L++ KE+H R ++ ++ SV N+LI+ YA+
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
G + A + F M+ + + SWNA+L A+A + L L +H+ I D +T S+L
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 424 TACSHS---GLVEEGLQIFRSMIREYTIVPGEVHY-------NCIIDLLSRAGQLTEAYN 473
C + G V+E + Y++ G +H N ++D ++ G + A+
Sbjct: 440 KFCINVQGIGKVKE--------VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 474 LVKSMPSTHSSAALCTLLSA 493
+ + + + +LLS
Sbjct: 492 IFLGLSERRTLVSYNSLLSG 511
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/472 (28%), Positives = 232/472 (49%), Gaps = 21/472 (4%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ VT +L +LG G+++H Y I+ G D + L+ MY K G + A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEK-DTLVGNALVSMYAKFGFI-FPDA 177
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
V SWN +IA + N +AF F M+ P+ T+AN + CA +
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 128 D--YLCH-GKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIY 182
D C G+ IH Y++ R ++ + C +LV Y + + +A +F R+ +KD V +
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 183 NVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
NV++ GY N +A +FH ++ K VSP+ ++++ + L D+ + IH Y+L
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 242 RHQYITR-VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
RH Y+ + N +I YA+ G A F+ M ++D++SW +++ + + +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA--FHG-KELSVNNSLI 357
L L E + +DSVT++SLL+ + + VKEVH + +A H +E + N+L+
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALL 477
Query: 358 TTYAKCGKLNMARYLFQQMTE-RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
YAKCG + A +F ++E R L S+N++L Y G++ + LF M D
Sbjct: 478 DAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS----TTDL 533
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
T++ ++ + S E + +FR I+ + P V I++LL QL
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFRE-IQARGMRPNTV---TIMNLLPVCAQL 581
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 128/271 (47%), Gaps = 8/271 (2%)
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 275
+FL+++ A + + D+ R++HG V + +I E++ +++ YAKC + + +F +M
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 276 RSRDLVSWTSMITGY-VHHGHIDEAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSA 333
S D V W ++TG V G E + F+ + + + SVT +L +LG
Sbjct: 83 DSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN 140
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL-FQQMTERCLTSWNAMLGAYA 392
K +H +A K+ V N+L++ YAK G + Y F + ++ + SWNA++ ++
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG---LVEEGLQIFRSMIREYTIV 449
+ A+ + F M +P+ T ++L C+ G QI +++ +
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
N ++ R G++ EA +L M S
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+Q + + PN VT+++LL A+L SL R HGY IR G G D + TLLD+Y KCG
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG--DIRLKGTLLDVYAKCG 616
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+K A +VF + +A V + ++A Y +G+ EA ++ M + PD + +
Sbjct: 617 SLKHAYSVF-QSDARRDLV-MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 121 ILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK 161
+ +C + G I+ + + G++P M VDL ++
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIAR 716
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 121/299 (40%), Gaps = 45/299 (15%)
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
G + + + FRLL D + +++A + + L++ + +H ++ H V+
Sbjct: 2 GPLRQFVQNFRLLS--GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-I 412
S++ YAKC +++ + +F+QM WN +L ++ E ++ F M +
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEP 118
Query: 413 KPDELTFTSILTACS-----------HSGLVEEGLQ----IFRSMIREYT----IVPGE- 452
KP +TF +L C HS +++ GL+ + +++ Y I P
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 453 -----------VHYNCIIDLLSRAGQLTEAYN---LVKSMPSTHSSAALCTLLSACRLYG 498
V +N II S + +A+ L+ P+ + A + +L C
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM- 237
Query: 499 DTEIGEAIAKQILKLEPRNS--SSYVLISNILAEG----GRWDEVAHIRAMTKDKELKS 551
D I +QI + S ++V + N L GR +E A + K+L S
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 305/567 (53%), Gaps = 5/567 (0%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+++ + P+ T+ S+L A L +++G+ +HG+A++ G + L+ MY K
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS-VVVVNNGLVAMYLKFR 256
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
A VF +M+ + S+N +I YL E+ +F + + + PDLLT+++
Sbjct: 257 RPTDARRVFDEMDVRDSV--SYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSV 313
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ +C L L K I+ YM++ G + L+D+Y+K D+ AR +F + KD
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V +N +++GY+++ +EA+ +F M+ M + +L LIS + L D++ + +H
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
++ + ++N +I YAKCG + + +F+ M + D V+W ++I+ V G
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ + +++ + D T + L + L KE+HC R + EL + N+LI
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
Y+KCG L + +F++M+ R + +W M+ AY M+G + L+ F M+ I PD + F
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
+I+ ACSHSGLV+EGL F M Y I P HY C++DLLSR+ ++++A +++MP
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 539
++ ++L ACR GD E E ++++I++L P + +L SN A +WD+V+
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 540 IRAMTKDKELKSTPGYSLIELDKQREV 566
IR KDK + PGYS IE+ K V
Sbjct: 734 IRKSLKDKHITKNPGYSWIEVGKNVHV 760
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 262/505 (51%), Gaps = 13/505 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+++ ++ P++ T S++ A A L + G ++ + GF D L+DMY + G
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE-SDLFVGNALVDMYSRMG 155
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF +M SWN LI+ Y +G EA E++ ++ + ++PD T+++
Sbjct: 156 LLTRARQVFDEMPVRDLV--SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ + L + G+ +HG+ ++ GV +V LV +Y KF T AR++F+ + +D+
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V YN M+ GYLK ++ E++ +F E + P++ +++ A LRD+ LA+ I+ Y
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+L+ ++ + N +I YAKCG + AR VFN M +D VSW S+I+GY+ G + EA
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ LF+++ + D +T + L+ ++L L K +H ++ +LSV+N+LI
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
YAKCG++ + +F M +WN ++ A G++A L++ M+ + PD TF
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 420 TSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 476
L C+ G +I ++R E + G N +I++ S+ G L + + +
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG----NALIEMYSKCGCLENSSRVFE 568
Query: 477 SMPSTHSSAALCTLLSACRLYGDTE 501
M S ++ A +YG+ E
Sbjct: 569 RM-SRRDVVTWTGMIYAYGMYGEGE 592
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 255/507 (50%), Gaps = 6/507 (1%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
RV+ + A + +L E R IH I G D F L+D Y + +V
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSD-FFSGKLIDKYSHFREPASSLSV 61
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F ++ + + V WN +I A+ NG EA E + ++ KV PD T + I +CA L
Sbjct: 62 FRRV-SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMT 187
G ++ ++ MG E D+ ALVD+YS+ +T+AR++F+ + +D V +N +++
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
GY + EA+ ++HE+ + P+ +++ A +L ++ + +HG+ L+ +
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
V + N ++ Y K AR VF+ M RD VS+ +MI GY+ ++E++ +F L
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LEN 299
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
+ + D +T+ S+L+A L LS K ++ +A E +V N LI YAKCG +
Sbjct: 300 LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 368 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
AR +F M + SWN+++ Y G+ E +KLF M + + D +T+ +++ +
Sbjct: 360 TARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 428 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 487
++ G + + I+ + V N +ID+ ++ G++ ++ + SM T +
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVS-NALIDMYAKCGEVGDSLKIFSSM-GTGDTVTW 477
Query: 488 CTLLSACRLYGDTEIGEAIAKQILKLE 514
T++SAC +GD G + Q+ K E
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSE 504
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 281/533 (52%), Gaps = 4/533 (0%)
Query: 32 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 91
IH + I G + L+ + G + A VF ++ +V +N +I Y
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV--YNSMIVVYSR 93
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
E L+ QMI K+ PD T I +C L G+++ + G + D+
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFV 153
Query: 152 CTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 210
C+++++LY K + +A +F ++ +D + + M+TG+ + ++A+ + EM
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGF 213
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
+ + L L+ A DL D ++ RS+HGY+ R V + ++ YAK G+++ A
Sbjct: 214 GRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASR 273
Query: 271 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 330
VF+RM + VSW S+I+G+ +G ++A +Q + D VTL+ +L A SQ+G
Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
L + VHC + H + +L+ Y+KCG L+ +R +F+ + + L WN M+
Sbjct: 334 LKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC 392
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
Y +HGN EV+ LF M NI+PD TF S+L+A SHSGLVE+G F MI +Y I P
Sbjct: 393 YGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 451 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 510
E HY C+IDLL+RAG++ EA +++ S ++ LLS C + + +G+ A +I
Sbjct: 453 SEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKI 512
Query: 511 LKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
L+L P + L+SN A +W EVA +R + ++ ++ PGYS IE++ +
Sbjct: 513 LQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGE 565
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 184/328 (56%), Gaps = 16/328 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ++ +RV ++ LL A+ LG + GR++HGY R G + + + ET+L+DMY K G
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM-NVVVETSLVDMYAKVG 266
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+++A+ VF +M T SW LI+ + NG A +AFE +M PDL+TL
Sbjct: 267 FIEVASRVFSRM--MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGV 324
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+++C+++ L G+ +H Y+++ V D V TAL+D+YSK ++ +R++FE + KD
Sbjct: 325 LVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDL 383
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V +N M++ Y + E +++F +M + ++ P+ A F +L+SA+S + + H +
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQ--HWF 441
Query: 240 -VLRHQYITRVEIANQ----IIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHH 293
V+ ++Y +++ + + +I A+ G ++ A + N + L W ++++G ++H
Sbjct: 442 SVMINKY--KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
Query: 294 GHIDEA-IILFRLLQRENLRIDSVTLIS 320
++ I ++LQ I TL+S
Sbjct: 500 RNLSVGDIAANKILQLNPDSIGIQTLVS 527
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 287/550 (52%), Gaps = 43/550 (7%)
Query: 32 IHGYAIRRGFGVCDEIFE----------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 81
I GY R G E+FE T+L Y + G V A +VF +M + S
Sbjct: 133 IKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV--S 190
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG--Y 139
WN L++AY+ N + EA LF+ + ++ +C ++ K + +
Sbjct: 191 WNALLSAYVQNSKMEEACMLFKSRENWALVS---------WNCLLGGFVKKKKIVEARQF 241
Query: 140 MIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
M V D+V+ ++ Y++ + +AR++F+ +D + M++GY++N + EA
Sbjct: 242 FDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 199 INVFHEMIKMSVSPNVALFLNLISA-----VSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
+F +M + + A+ + +L D+ R++ + N
Sbjct: 301 RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW-------------N 347
Query: 254 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 313
+I YA+CG + A+ +F++M RD VSW +MI GY GH EA+ LF ++RE R+
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
+ + S L + + L K++H + + V N+L+ Y KCG + A LF
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
++M + + SWN M+ Y+ HG L+ F MK +KPD+ T ++L+ACSH+GLV+
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
+G Q F +M ++Y ++P HY C++DLL RAG L +A+NL+K+MP +A TLL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 494 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 553
R++G+TE+ E A +I +EP NS YVL+SN+ A GRW +V +R +DK +K P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 554 GYSLIELDKQ 563
GYS IE+ +
Sbjct: 648 GYSWIEIQNK 657
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 231/483 (47%), Gaps = 58/483 (12%)
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA-NAILSCAELDYLCHGK 134
+ + WN I++Y+ G+ EA +F++M P +++ N ++S YL +G+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMIS----GYLRNGE 110
Query: 135 -SIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
+ + E D+V+ ++ Y + ++ KAR++FE + +D +N M++GY +N
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 193 DLPVEAINVFHEMI-KMSVSPNV---ALFLN--------LISAVSDLRDIRLARSIHGYV 240
+A +VF M K VS N A N L + + + + G+V
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 241 LR------HQYITRVEIA-----NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
+ Q+ + + N II YA+ G + AR +F+ +D+ +WT+M++G
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
Y+ + ++EA LF + N V+ ++L Q + KE+ + +
Sbjct: 291 YIQNRMVEEARELFDKMPERN----EVSWNAMLAGYVQGERMEMAKEL----FDVMPCRN 342
Query: 350 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
+S N++IT YA+CGK++ A+ LF +M +R SW AM+ Y+ G+ E L+LF M+
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 410 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVHYNCIIDLLSRAG 466
+ + +F+S L+ C+ +E G Q+ +++ E G N ++ + + G
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG----NALLLMYCKCG 458
Query: 467 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIG----EAIAKQILKLEPRNSSSYV 522
+ EA +L K M + + T+++ +G E+ E++ ++ LK P +++
Sbjct: 459 SIEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK--PDDATMVA 515
Query: 523 LIS 525
++S
Sbjct: 516 VLS 518
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 301 bits (770), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 297/579 (51%), Gaps = 62/579 (10%)
Query: 32 IHGYAIRRGFGVCDEIFE----------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS 81
+H YA+ + +F+ LL Y K G + + F K+ +
Sbjct: 48 VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV--T 105
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL--LTLANAILSCAELDYLCHGKSIHGY 139
WN LI Y +G A + + M+ R +L +TL + + ++ GK IHG
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 140 MIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL-------- 190
+I++G E ++ + L+ +Y+ ++ A+K+F L +++ V+YN +M G L
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 191 ----------------------KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
+N L EAI F EM + + F +++ A L
Sbjct: 225 LQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
I + IH ++R + + + + +I Y KC L YA+ VF+RM+ +++VSWT+M+
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
GY G +EA+ +F +QR + D TL QA+S +S+++E FHGK
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTL---GQAISACANVSSLEEG-----SQFHGK 396
Query: 349 ELS--------VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
++ V+NSL+T Y KCG ++ + LF +M R SW AM+ AYA G E
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
++LF+ M +KPD +T T +++ACS +GLVE+G + F+ M EY IVP HY+C+ID
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
L SR+G+L EA + MP + TLLSACR G+ EIG+ A+ +++L+P + +
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 521 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
Y L+S+I A G+WD VA +R ++K +K PG S I+
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 205/480 (42%), Gaps = 77/480 (16%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF------------------- 41
M+D RVTL+++L ++ G + G+ IHG I+ GF
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 42 ---------GVCDE--IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 90
G+ D + +L+ CG ++ A +F M S SW +I
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV---SWAAMIKGLA 246
Query: 91 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 150
NG A EA E FR+M + + D + + +C L + GK IH +IR + +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 151 ACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
+AL+D+Y K A+ +F+R++ K+ V + M+ GY + EA+ +F +M +
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
+ P+ ISA +++ + HG + I V ++N ++ Y KCG + +
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
+FN M RD VSWT+M++ Y G E I LF + + L+ D VTL ++ A S+ G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER-----CLTSW 384
+ + RY F+ MT + +
Sbjct: 487 LVEKGQ----------------------------------RY-FKLMTSEYGIVPSIGHY 511
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
+ M+ ++ G E ++ N M PD + +T++L+AC + G +E G S+I
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPF---PPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 64/277 (23%)
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR---------------- 274
R + IHG ++R + N I+H YA YAR VF+R
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 275 ---------------MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE-NLRIDSVTL 318
+ RD V+W +I GY G + A+ + + R+ + + VTL
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 319 ISLLQALSQLGCLSAVKEVH--------------------------CLT--YRAFHG--- 347
+++L+ S G +S K++H C++ + F+G
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 407
+ + NSL+ CG + A LF+ M E+ SW AM+ A +G E ++ F M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
K+ +K D+ F S+L AC G + EG QI +IR
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 254/444 (57%), Gaps = 11/444 (2%)
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 181
+C + L G+ +H +MI+ P T L+ Y K D + ARK+ + + K+ V
Sbjct: 61 ACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVS 120
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+ M++ Y + EA+ VF EM++ PN F ++++ + L + IHG ++
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
+ Y + + + + ++ YAK G ++ AR +F + RD+VS T++I GY G +EA+
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS----VNNSLI 357
+F L E + + VT SLL ALS L L K+ HC R +EL + NSLI
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR----RELPFYAVLQNSLI 296
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDE 416
Y+KCG L+ AR LF M ER SWNAML Y+ HG EVL+LF M+ +KPD
Sbjct: 297 DMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 356
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 475
+T ++L+ CSH + + GL IF M+ EY PG HY CI+D+L RAG++ EA+ +
Sbjct: 357 VTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
Query: 476 KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWD 535
K MPS ++ L +LL ACR++ +IGE++ ++++++EP N+ +YV++SN+ A GRW
Sbjct: 417 KRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476
Query: 536 EVAHIRAMTKDKELKSTPGYSLIE 559
+V ++RAM K + PG S I+
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 168/315 (53%), Gaps = 5/315 (1%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 74
+LL+A +L++G+ +H + I+ + + T LL Y KC ++ A V +M
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRY-LPATYLRTRLLIFYGKCDCLEDARKVLDEM-- 113
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
V SW +I+ Y G + EA +F +M+ P+ T A + SC L GK
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 193
IHG +++ + + ++L+D+Y+K + +AR++FE L +D V ++ GY +
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
L EA+ +FH + +SPN + +L++A+S L + + H +VLR + + N
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 254 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LR 312
+I Y+KCG L YAR +F+ M R +SW +M+ GY HG E + LFRL++ E ++
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 313 IDSVTLISLLQALSQ 327
D+VTL+++L S
Sbjct: 354 PDAVTLLAVLSGCSH 368
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 143/264 (54%), Gaps = 9/264 (3%)
Query: 220 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 279
L++A D R +R + +H ++++ +Y+ + +++ Y KC L+ AR V + M ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 280 LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 339
+VSWT+MI+ Y GH EA+ +F + R + + + T ++L + + L K++H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 340 LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE 399
L + + + V +SL+ YAK G++ AR +F+ + ER + S A++ YA G E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 400 VLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ----IFRSMIREYTIVPGEVHY 455
L++F+ + + P+ +T+ S+LTA S L++ G Q + R + Y ++
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ----- 292
Query: 456 NCIIDLLSRAGQLTEAYNLVKSMP 479
N +ID+ S+ G L+ A L +MP
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMP 316
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 9/276 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAA 66
PN T ++L + + L G+ IHG ++ + IF ++LLDMY K G +K A
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD--SHIFVGSSLLDMYAKAGQIKEAR 208
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+F + V S +IA Y G EA E+F ++ + P+ +T A+ + + +
Sbjct: 209 EIFECL--PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG 266
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 185
L L HGK H +++R + V +L+D+YSK +++ AR++F+ + + A+ +N M
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAM 326
Query: 186 MTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
+ GY K+ L E + +F M + V P+ L ++S S R +I ++ +
Sbjct: 327 LVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 245 YITR--VEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
Y T+ E I+ + G + A RM S+
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ + + PN VT SLL A + L L G+ H + +RR + + +L+DMY KCG
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCG 303
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLAN 119
+ A +F M T SWN ++ Y +G E ELFR M ++V PD +TL
Sbjct: 304 NLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 120 AILSCAELDYLCHGKSIHGYMI--RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 176
+ C+ G +I M+ G +P +VD+ + + +A + +R+ +
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 421
Query: 177 K 177
K
Sbjct: 422 K 422
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 301/555 (54%), Gaps = 14/555 (2%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFGK 71
L+++L A L Q+ +H I GF DE+ ++L + Y + + A + F +
Sbjct: 10 LLTILSQAKTLNHTQQ---VHAKVIIHGFE--DEVVLGSSLTNAYIQSNRLDFATSSFNR 64
Query: 72 MNATSTTVGSWNPLIAAYLHNGQAL--EAFELFRQMIHRKVLPDLLTLANAILSCAELDY 129
+ SWN +++ Y + + L+ +M D L AI +C L
Sbjct: 65 IPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 130 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTG 188
L +G IHG ++ G++ D +LV++Y++ + A+K+F+ + +++V++ V+M G
Sbjct: 125 LENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKG 184
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
YLK E +F M ++ + + L+ A ++ ++ + +HG +R +I +
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 249 VE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
+ + II Y KC L AR +F R++V WT++I+G+ EA LFR +
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SLITTYAKCGK 365
RE++ + TL ++L + S LG L K VH Y +G E+ N S I YA+CG
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVH--GYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
+ MAR +F M ER + SW++M+ A+ ++G + E L F+ MK N+ P+ +TF S+L+A
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
CSHSG V+EG + F SM R+Y +VP E HY C++DLL RAG++ EA + + +MP ++
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 486 ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 545
A LLSACR++ + ++ IA+++L +EP SS YVL+SNI A+ G W+ V +R
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 546 DKELKSTPGYSLIEL 560
K + G S E+
Sbjct: 543 IKGYRKHVGQSATEV 557
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 163/302 (53%), Gaps = 5/302 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+D L + +TL+ L+ A + + + G+ +HG +IRR F + + +++DMY KC
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A +F + V W LI+ + +A+EAF+LFRQM+ +LP+ TLA
Sbjct: 261 LLDNARKLF--ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAI 318
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
++SC+ L L HGKS+HGYMIR G+E D V T+ +D+Y++ ++ AR +F+ + ++
Sbjct: 319 LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHG 238
+ ++ M+ + N L EA++ FH+M +V PN F++L+SA S +++ +
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES 438
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHID 297
+ + E ++ + G + A+ + M + + S W ++++ H +D
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Query: 298 EA 299
A
Sbjct: 499 LA 500
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 283/527 (53%), Gaps = 33/527 (6%)
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF + + ++ +NP + + + ++++ H D + + +
Sbjct: 63 ALNVFSSIPSPPESI-VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYN 183
+++ L G +HG ++ D T +D+Y+ + AR +F+ + ++D V +N
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
M+ Y + L EA +F EM +V P+ + N++SA ++R R+I+ +++ +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 244 --------------------------QYITRVEIANQIIHT-----YAKCGYLQYARLVF 272
++ ++ + N + T Y+KCG L A+++F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 332
++ +DLV WT+MI+ YV + EA+ +F + ++ D V++ S++ A + LG L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 333 AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 392
K VH + ELS+NN+LI YAKCG L+ R +F++M R + SW++M+ A +
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 452
MHG ++ L LF MK N++P+E+TF +L CSHSGLVEEG +IF SM EY I P
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKL 481
Query: 453 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 512
HY C++DL RA L EA +++SMP + +L+SACR++G+ E+G+ AK+IL+
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Query: 513 LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
LEP + + VL+SNI A RW++V +IR + ++K + G S I+
Sbjct: 542 LEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 150/331 (45%), Gaps = 37/331 (11%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+D + P+ + L +++ A + G+++ RAI+ + I + D T L+ MY G
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM-DTHLLTALVTMYAGAG 261
Query: 61 GVKMAAAVFGKMNATSTTVGS-----------------------------WNPLIAAYLH 91
+ MA F KM+ + V + W +I+AY+
Sbjct: 262 CMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVE 321
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
+ EA +F +M + PD++++ + I +CA L L K +H + G+E ++
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 152 CTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
AL+++Y+K D T R +FE++ ++ V ++ M+ + +A+++F M +
Sbjct: 382 NNALINMYAKCGGLDAT--RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQY 267
+V PN F+ ++ S + + I + IT ++E ++ + + L+
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLRE 499
Query: 268 ARLVFNRMR-SRDLVSWTSMITGYVHHGHID 297
A V M + ++V W S+++ HG ++
Sbjct: 500 ALEVIESMPVASNVVIWGSLMSACRIHGELE 530
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 302/562 (53%), Gaps = 18/562 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M++ + N+V S L AAA +G L +G AIH YA+++G + D T+L+ MY KCG
Sbjct: 291 MRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGL-IGDVSVATSLMSMYSKCG 349
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+++A +F +N V SW+ +IA+Y GQ EA LFR M+ + P+ +TL +
Sbjct: 350 ELEIAEQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ CA + GKSIH Y I+ +E ++ TA++ +Y+K + A K FERL KDA
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDA 467
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V +N + GY + +A +V+ M V P+ + ++ + D ++G
Sbjct: 468 VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDE 298
+++H + + +A+ +I+ + KC L A ++F++ + VSW M+ GY+ HG +E
Sbjct: 528 IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEE 587
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
A+ FR ++ E + ++VT +++++A ++L L VH + + V NSL+
Sbjct: 588 AVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVD 647
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
YAKCG + + F +++ + + SWN ML AYA HG + + LF M+ +KPD ++
Sbjct: 648 MYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVS 707
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
F S+L+AC H+GLVEEG +IF M + I HY C++DLL +AG EA +++ M
Sbjct: 708 FLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRM 767
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
S LL++ R++ + + A Q++KLEP N S Y ++ R EV
Sbjct: 768 RVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY-------SQDRRLGEVN 820
Query: 539 HIRAMTKDKELKSTPGYSLIEL 560
++ +K P S IE+
Sbjct: 821 NV------SRIKKVPACSWIEV 836
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 249/533 (46%), Gaps = 12/533 (2%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
+++ + P++ + L A A ++G IH G D T L++MY K
Sbjct: 92 EEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES-DVYIGTALVEMYCKARD 150
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
+ A VF KM+ V +WN +++ NG + A LF M V D ++L N I
Sbjct: 151 LVSARQVFDKMHVKD--VVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 122 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 180
+ ++L+ + +HG +I+ G + L+D+Y D+ A +FE + KD
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+ MM Y N E + +F M V N + + A + + D+ +IH Y
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
++ I V +A ++ Y+KCG L+ A +F + RD+VSW++MI Y G DEAI
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
LFR + R +++ ++VTL S+LQ + + K +HC +A EL ++I+ Y
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMY 446
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AKCG+ + A F+++ + ++NA+ Y G+ + ++ +MKL + PD T
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMV 506
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNLVKSMP 479
+L C+ G ++ +I+ E H + +I++ ++ L A L
Sbjct: 507 GMLQTCAFCSDYARGSCVYGQIIKHG--FDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQ--ILKLEPRNSSSYVLISNILAE 530
S+ + +++ L+G E A +Q + K +P N+ ++V I AE
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP-NAVTFVNIVRAAAE 616
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 210/436 (48%), Gaps = 44/436 (10%)
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDL 194
+HG +I G++P L++ YS F +R +F+ +R+ V++N M+ GY + L
Sbjct: 24 VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 195 PVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
EA+ F M + + P+ F + A + D + IH + + V I
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 254 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 313
++ Y K L AR VF++M +D+V+W +M++G +G A++LF ++ + I
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
D V+L +L+ A+S+L + +H L + G + ++ LI Y C L A +F
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHGLVIK--KGFIFAFSSGLIDMYCNCADLYAAESVF 257
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
+++ + +SW M+ AYA +G + EVL+LF+ M+ +++ +++ S L A ++ G +
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLV 317
Query: 434 EGLQIF-----RSMIREYTIVP---------GE----------------VHYNCIIDLLS 463
+G+ I + +I + ++ GE V ++ +I
Sbjct: 318 KGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYE 377
Query: 464 RAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIGEAIAKQILK--LEPRNS 518
+AGQ EA +L + M H ++ L ++L C + +G++I +K +E
Sbjct: 378 QAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 519 SSYVLISNILAEGGRW 534
++ +IS + A+ GR+
Sbjct: 438 TATAVIS-MYAKCGRF 452
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
+ NL+ + + ++ R +HG ++ ++ ++ NQ+I+ Y+ +R++F+ +R
Sbjct: 5 YTNLLLMLRECKNFRCLLQVHGSLI----VSGLKPHNQLINAYSLFQRQDLSRVIFDSVR 60
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE-NLRIDSVTLISLLQALSQLGCLSAVK 335
+V W SMI GY G EA+ F + E + D + L+A +
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 336 EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 395
+H L ++ + +L+ Y K L AR +F +M + + +WN M+ A +G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
+ L LF+ M+ + D ++ +++ A S
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 301/560 (53%), Gaps = 21/560 (3%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 75
LL A + G +HG I+ G+ C+ ++L+DMY KC V+ A F +++
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYE-CNVYVGSSLVDMYAKCERVEDAFEAFKEISEP 165
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQM-------IHRKVLPDLLTLANAILSCAELD 128
++ SWN LIA ++ AF L M + LLTL + + C L
Sbjct: 166 NSV--SWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLL- 222
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR-NKDAVIYNVMM 186
K +H ++++G++ ++ C A++ Y+ V+ A+++F+ L +KD + +N M+
Sbjct: 223 -----KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
G+ K++L A +F +M + V ++ + L+SA S +S+HG V++
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 247 TRVEIANQIIHTYAK--CGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
N +I Y + G ++ A +F ++S+DL+SW S+ITG+ G ++A+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
L+ +++D +LL++ S L L +++H L ++ V +SLI Y+KCG
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Query: 365 KLNMARYLFQQMTERCLT-SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
+ AR FQQ++ + T +WNAM+ YA HG L LF+ M N+K D +TFT+IL
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
TACSH+GL++EGL++ M Y I P HY +DLL RAG + +A L++SMP
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPD 577
Query: 484 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 543
L T L CR G+ E+ +A +L++EP + +YV +S++ ++ +W+E A ++ M
Sbjct: 578 PMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637
Query: 544 TKDKELKSTPGYSLIELDKQ 563
K++ +K PG+S IE+ Q
Sbjct: 638 MKERGVKKVPGWSWIEIRNQ 657
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 183/408 (44%), Gaps = 38/408 (9%)
Query: 137 HGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 195
H Y I+ G D+ ++D Y KF + A +F+ + +D+V +N M++GY
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 196 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQI 255
+A +F M + + F L+ ++ ++ L +HG V++ Y V + + +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 256 IHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ-RENLRID 314
+ YAKC ++ A F + + VSW ++I G+V I A L L++ + + +D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 315 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 374
+ T LL L + +K+VH + E+++ N++I++YA CG ++ A+ +F
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 375 QM-TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS------ 427
+ + L SWN+M+ ++ H +LF M+ ++ D T+T +L+ACS
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 428 -----HSGLVEEGLQIFRS----MIREYTIVPGE-----------------VHYNCIIDL 461
H ++++GL+ S +I Y P + +N II
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 462 LSRAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIGEAI 506
++ G +A + S+ A LL +C ++G+ I
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 74
+LL + + L +LQ G+ IH A + GF V +E ++L+ MY KCG ++ A F ++++
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGF-VSNEFVISSLIVMYSKCGIIESARKCFQQISS 471
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
+TV +WN +I Y +G + +LF QM ++ V D +T + +C+ + G
Sbjct: 472 KHSTV-AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 135 SIHGYMIRM-GVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAVIYNVMM 186
+ M + ++P M A VDL + V KA+++ E + N D ++ +
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 585
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 300/563 (53%), Gaps = 17/563 (3%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKM 64
N T+ +LL + + GR IHG ++ GF VC+ TLL MY G
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN-----TLLRMYAGAGRSVE 314
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF +M + + SWN L+A+++++G++L+A L MI + +T +A+ +C
Sbjct: 315 ANLVFKQM--PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 183
D+ G+ +HG ++ G+ + + ALV +Y K +++++R++ ++ +D V +N
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV---SDLRDIRLARSIHGYV 240
++ GY +++ P +A+ F M VS N ++++SA DL + + +H Y+
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYI 490
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
+ + + + N +I YAKCG L ++ +FN + +R++++W +M+ HHGH +E +
Sbjct: 491 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 550
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
L ++ + +D + L A ++L L +++H L + + + N+ Y
Sbjct: 551 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 610
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
+KCG++ + R L SWN ++ A HG + EV F+ M IKP +TF
Sbjct: 611 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 670
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
S+LTACSH GLV++GL + + R++ + P H C+IDLL R+G+L EA + MP
Sbjct: 671 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 730
Query: 481 THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 540
+ +LL++C+++G+ + G A+ + KLEP + S YVL SN+ A GRW++V ++
Sbjct: 731 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENV 790
Query: 541 RAMTKDKELKSTPGYSLIELDKQ 563
R K +K S ++L +
Sbjct: 791 RKQMGFKNIKKKQACSWVKLKDK 813
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 212/427 (49%), Gaps = 5/427 (1%)
Query: 55 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 114
MY K G VK A +F M + SWN +++ + G LE E FR+M + P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEV--SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 115 LTLANAILSCAELDYLC-HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFE 172
+A+ + +C + G +HG++ + G+ D+ TA++ LY + V+ +RK+FE
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 173 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
+ +++ V + +M GY P E I+++ M V N +IS+ L+D L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
R I G V++ +++ + N +I G + YA +F++M RD +SW S+ Y
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+GHI+E+ +F L++R + ++S T+ +LL L + + +H L + + V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
N+L+ YA G+ A +F+QM + L SWN+++ ++ G + L L M
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
+ +TFTS L AC E+G +I ++ + ++ N ++ + + G+++E+
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 473 NLVKSMP 479
++ MP
Sbjct: 418 RVLLQMP 424
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/601 (29%), Positives = 295/601 (49%), Gaps = 52/601 (8%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T + A ++ S++ G + H ++ GF + + L+ MY +C + A
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLSDARK 183
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAE 126
VF +M+ V SWN +I +Y G+ A E+F +M + PD +TL N + CA
Sbjct: 184 VFDEMSVWD--VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVM 185
L GK +H + + + +M LVD+Y+K + +A +F + KD V +N M
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 186 -----------------------------------MTGYLKNDLPVEAINVFHEMIKMSV 210
++GY + L EA+ V +M+ +
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-------IANQIIHTYAKCG 263
PN ++++S + + + + IH Y +++ R + NQ+I YAKC
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 264 YLQYARLVFNRM--RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL--RIDSVTLI 319
+ AR +F+ + + RD+V+WT MI GY HG ++A+ L + E+ R ++ T+
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
L A + L L K++H R L V+N LI YAKCG ++ AR +F M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ +W +++ Y MHG E L +F+ M+ K D +T +L ACSHSG++++G++
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
F M + + PG HY C++DLL RAG+L A L++ MP LS CR++G
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 499 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
E+GE A++I +L + SY L+SN+ A GRW +V IR++ + K +K PG S +
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 559 E 559
E
Sbjct: 722 E 722
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 50/480 (10%)
Query: 41 FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFE 100
FG+ + L+ Y G + A ++ + + V WN LI +Y NG A +
Sbjct: 54 FGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLY 113
Query: 101 LFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 160
LF M PD T +C E+ + G+S H + G ++ ALV +YS
Sbjct: 114 LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYS 173
Query: 161 KF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFL 218
+ ++ ARK+F+ + D V +N ++ Y K P A+ +F M + P+ +
Sbjct: 174 RCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
N++ + L L + +H + + + I + + N ++ YAKCG + A VF+ M +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 279 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID------------------------ 314
D+VSW +M+ GY G ++A+ LF +Q E +++D
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 315 -----------SVTLISLLQALSQLGCLSAVKEVHCLTY-------RAFHGKELSVNNSL 356
VTLIS+L + +G L KE+HC + HG E V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 357 ITTYAKCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGNYAEVLKLFNHM--KLGNI 412
I YAKC K++ AR +F ++ ER + +W M+G Y+ HG+ + L+L + M +
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEA 471
+P+ T + L AC+ + G QI +R + VP V NC+ID+ ++ G +++A
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDA 532
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 12/236 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-----RGFGVCDE-IFETTLLD 54
M + PN VTL+S+L A +G+L G+ IH YAI+ R G DE + L+D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 55 MYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR--KVLP 112
MY KC V A A+F ++ V +W +I Y +G A +A EL +M + P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIR--MGVEPDMVACTALVDLYSKF-DVTKARK 169
+ T++ A+++CA L L GK IH Y +R P V+ L+D+Y+K ++ AR
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARL 534
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
+F+ + K+ V + +MTGY + EA+ +F EM ++ + L ++ A S
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 132/280 (47%), Gaps = 8/280 (2%)
Query: 203 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 262
H+ IK+S+ A + + + I + IH +L +T + + + +I TY
Sbjct: 15 HQYIKVSLFSTSAPEIT-PPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISV 72
Query: 263 GYLQYARLVFNRMRSRD--LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 320
G L +A + R D + W S+I Y +G ++ + LF L+ + D+ T
Sbjct: 73 GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPF 132
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
+ +A ++ + + H L+ + V N+L+ Y++C L+ AR +F +M+
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ SWN+++ +YA G L++F+ M + G +PD +T ++L C+ G G Q+
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFG-CRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ I V NC++D+ ++ G + EA + +M
Sbjct: 252 HCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNM 290
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 9/164 (5%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
+D + PN T+ L A A L +L+ G+ IH YA+R L+DMY KCG
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
+ A VF M A + +W L+ Y +G EA +F +M D +TL +
Sbjct: 529 ISDARLVFDNMMAKNEV--TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL 586
Query: 122 LSCAELDYLCHGKSIHGYMIRM----GVEPDMVACTALVDLYSK 161
+C+ + G Y RM GV P LVDL +
Sbjct: 587 YACSHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGR 627
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 300/563 (53%), Gaps = 17/563 (3%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKM 64
N T+ +LL + + GR IHG ++ GF VC+ TLL MY G
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN-----TLLRMYAGAGRSVE 297
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF +M + + SWN L+A+++++G++L+A L MI + +T +A+ +C
Sbjct: 298 ANLVFKQM--PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 183
D+ G+ +HG ++ G+ + + ALV +Y K +++++R++ ++ +D V +N
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV---SDLRDIRLARSIHGYV 240
++ GY +++ P +A+ F M VS N ++++SA DL + + +H Y+
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYI 473
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
+ + + + N +I YAKCG L ++ +FN + +R++++W +M+ HHGH +E +
Sbjct: 474 VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVL 533
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
L ++ + +D + L A ++L L +++H L + + + N+ Y
Sbjct: 534 KLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMY 593
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
+KCG++ + R L SWN ++ A HG + EV F+ M IKP +TF
Sbjct: 594 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFV 653
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
S+LTACSH GLV++GL + + R++ + P H C+IDLL R+G+L EA + MP
Sbjct: 654 SLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 713
Query: 481 THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 540
+ +LL++C+++G+ + G A+ + KLEP + S YVL SN+ A GRW++V ++
Sbjct: 714 KPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENV 773
Query: 541 RAMTKDKELKSTPGYSLIELDKQ 563
R K +K S ++L +
Sbjct: 774 RKQMGFKNIKKKQACSWVKLKDK 796
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 201/401 (50%), Gaps = 3/401 (0%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC-HGKSIHGY 139
SWN +++ + G LE E FR+M + P +A+ + +C + G +HG+
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 67
Query: 140 MIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
+ + G+ D+ TA++ LY + V+ +RK+FE + +++ V + +M GY P E
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 258
I+++ M V N +IS+ L+D L R I G V++ +++ + N +I
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 259 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 318
G + YA +F++M RD +SW S+ Y +GHI+E+ +F L++R + ++S T+
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 247
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
+LL L + + +H L + + V N+L+ YA G+ A +F+QM
Sbjct: 248 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ L SWN+++ ++ G + L L M + +TFTS L AC E+G +I
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RI 366
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
++ + ++ N ++ + + G+++E+ ++ MP
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 159/309 (51%), Gaps = 10/309 (3%)
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI-RLARS 235
++ V +N MM+G ++ L +E + F +M + + P+ + +L++A + R
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
+HG+V + ++ V ++ I+H Y G + +R VF M R++VSWTS++ GY G
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 355
+E I +++ ++ E + + ++ ++ + L S +++ ++ +L+V NS
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 356 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
LI+ G ++ A Y+F QM+ER SWN++ AYA +G+ E ++F+ M+ + D
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH---D 240
Query: 416 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR----AGQLTEA 471
E+ T++ T S G V+ Q + I + G C+ + L R AG+ EA
Sbjct: 241 EVNSTTVSTLLSVLGHVDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 472 YNLVKSMPS 480
+ K MP+
Sbjct: 299 NLVFKQMPT 307
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL-SA 333
M R+ VSW +M++G V G E + FR + ++ S + SL+ A + G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
+VH ++ ++ V+ +++ Y G ++ +R +F++M +R + SW +++ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE---GLQIFRSMIR 444
G EV+ ++ M+ + +E + + ++++C GL+++ G QI +++
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVK 171
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 261/492 (53%), Gaps = 5/492 (1%)
Query: 73 NATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 130
N+ V S WN + + E+ L+R M+ PD + + SCA L
Sbjct: 10 NSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 69
Query: 131 CHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFER--LRNKDAVIYNVMMT 187
G+ +H ++ + G E + TAL+ +Y K V ARK+FE ++ +V YN +++
Sbjct: 70 VSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALIS 129
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
GY N +A +F M + VS + L L+ + + L RS+HG ++ +
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS 189
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
V + N I Y KCG ++ R +F+ M + L++W ++I+GY +G + + L+ ++
Sbjct: 190 EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMK 249
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
+ D TL+S+L + + LG EV L + V+N+ I+ YA+CG L
Sbjct: 250 SSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 368 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
AR +F M + L SW AM+G Y MHG L LF+ M I+PD F +L+ACS
Sbjct: 310 KARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 428 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 487
HSGL ++GL++FR+M REY + PG HY+C++DLL RAG+L EA ++SMP A
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 488 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 547
LL AC+++ + ++ E ++++ EP N YVL+SNI ++ + + IR M +++
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489
Query: 548 ELKSTPGYSLIE 559
+ PGYS +E
Sbjct: 490 AFRKKPGYSYVE 501
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 209/441 (47%), Gaps = 6/441 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ + +L + A L G+ +H + + G + T L+ MY KCG V A
Sbjct: 51 PDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCET-EPFVLTALISMYCKCGLVADARK 109
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + +S +N LI+ Y N + +A +FR+M V D +T+ + C
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVP 169
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
+YL G+S+HG ++ G++ ++ + + +Y K V R++F+ + K + +N ++
Sbjct: 170 EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
+GY +N L + + ++ +M V P+ ++++S+ + L ++ + V + ++
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
V ++N I YA+CG L AR VF+ M + LVSWT+MI Y HG + ++LF +
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS-LITTYAKCGK 365
+ +R D + +L A S G E+ R + + + S L+ + G+
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 366 LNMARYLFQQM-TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
L+ A + M E W A+LGA +H N F K+ +P+ + + +++
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF--AKVIEFEPNNIGYYVLMS 467
Query: 425 ACSHSGLVEEGLQIFRSMIRE 445
+EG+ R M+RE
Sbjct: 468 NIYSDSKNQEGIWRIRVMMRE 488
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M++ + + VT++ L+ L GR++HG ++ G + + + MY KCG
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL-NSFITMYMKCG 205
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V+ +F +M +WN +I+ Y NG A + EL+ QM V PD TL +
Sbjct: 206 SVEAGRRLFDEMPVKGLI--TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSV 263
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ SCA L G + + G P++ A + +Y++ ++ KAR +F+ + K
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSL 323
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
V + M+ Y + + + +F +MIK + P+ A+F+ ++SA S
Sbjct: 324 VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + P+ TLVS+L + A LG+ + G + GF V + + MY +CG
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF-VPNVFVSNASISMYARCG 306
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A AVF M S SW +I Y +G LF MI R + PD
Sbjct: 307 NLAKARAVFDIMPVKSLV--SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 121 ILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
+ +C+ G + M R +EP + LVDL +
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 314/568 (55%), Gaps = 11/568 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M + P+ V+ V++ A + S+++ +G ++ G ++F ++ + MY +
Sbjct: 205 MMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAEL 264
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLA 118
G ++ + VF + + WN +I Y+ N +E+ ELF + I ++++ D +T
Sbjct: 265 GDIESSRRVFD--SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
A + + L + G+ HG++ + E +V +L+ +YS+ V K+ +F +R +
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
D V +N M++ +++N L E + + +EM K + L+SA S+LR+ + + H
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF--NRMRSRDLVSWTSMITGYVHHGH 295
+++R Q I + + +I Y+K G ++ ++ +F + RD +W SMI+GY +GH
Sbjct: 443 AFLIR-QGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 355
++ ++FR + +N+R ++VT+ S+L A SQ+G + K++H + R + + + V ++
Sbjct: 502 TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASA 561
Query: 356 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
L+ Y+K G + A +F Q ER ++ M+ Y HG + LF M+ IKPD
Sbjct: 562 LVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPD 621
Query: 416 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 475
+TF ++L+ACS+SGL++EGL+IF M Y I P HY CI D+L R G++ EAY V
Sbjct: 622 AITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV 681
Query: 476 KSMPSTHSSAALC-TLLSACRLYGDTEIGEAIAKQILKLEP-RNSSSY-VLISNILAEGG 532
K + + A L +LL +C+L+G+ E+ E +++++ K + +N S Y VL+SN+ AE
Sbjct: 682 KGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQ 741
Query: 533 RWDEVAHIRAMTKDKELKSTPGYSLIEL 560
+W V +R ++K LK G S IE+
Sbjct: 742 KWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 240/484 (49%), Gaps = 23/484 (4%)
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP----DLL 115
G ++A +F + +T + WN +I ++ N EA + +M +K P D
Sbjct: 53 GNPQLARQLFDAIPKPTTVL--WNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAY 108
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-------FDVTKAR 168
T ++ + +CAE L GK++H ++IR V +L+++Y F+ R
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 169 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
K+F+ +R K+ V +N +++ Y+K EA F M++M V P+ F+N+ AVS R
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 229 DIRLARSIHGYVLR--HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 286
I+ A +G +L+ +Y+ + + + I YA+ G ++ +R VF+ R++ W +M
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 287 ITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
I YV + + E+I LF + + + D VT + A+S L + ++ H + F
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
+ + NSL+ Y++CG ++ + +F M ER + SWN M+ A+ +G E L L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
M+ K D +T T++L+A S+ E G Q +IR+ G Y +ID+ S++
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKS 466
Query: 466 GQLTEAYNLVK-SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLI 524
G + + L + S + A +++S G TE + +++L+ R ++ V +
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA--VTV 524
Query: 525 SNIL 528
++IL
Sbjct: 525 ASIL 528
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/574 (32%), Positives = 305/574 (53%), Gaps = 16/574 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-RGFGVCDEIFETTLLDMYHKC 59
M+ Q + PN TL + A + L S GR H ++ FG D +T+L+ MY K
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG--DIYVDTSLVGMYCKA 166
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLA 118
G V+ VF M +T +W+ +++ Y G+ EA ++F + K D +
Sbjct: 167 GLVEDGLKVFAYMPERNTY--TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVF 224
Query: 119 NAILSC-AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 176
A+LS A Y+ G+ IH I+ G+ + ALV +YSK + + +A KMF+ +
Sbjct: 225 TAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD 284
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
++++ ++ M+TGY +N +EA+ +F M + P+ + +++A SD+ + + +
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H ++L+ + + ++ YAK G L AR F+ ++ RD+ WTS+I+GYV +
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
+EA+IL+R ++ + + T+ S+L+A S L L K+VH T + G E+ + ++L
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSAL 464
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
T Y+KCG L +F++ + + SWNAM+ + +G E L+LF M ++PD+
Sbjct: 465 STMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 476
+TF +I++ACSH G VE G F M + + P HY C++DLLSRAGQL EA ++
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Query: 477 SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 536
S H LLSAC+ +G E+G ++++ L R SS+YV +S I GR +
Sbjct: 585 SANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRD 644
Query: 537 V----AHIRAMTKDKELKSTPGYSLIELDKQREV 566
V H+RA KE+ G S IEL Q V
Sbjct: 645 VERVWKHMRANGVSKEV----GCSWIELKNQYHV 674
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 152/575 (26%), Positives = 262/575 (45%), Gaps = 48/575 (8%)
Query: 5 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 64
L P+ TL+ L ++ +L GRA+HG IR G C + L++ Y KCG +
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQ-HANVLVNFYAKCGKLAK 67
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAF---ELFRQMIHRKVLPDLLTLANAI 121
A ++F + V SWN LI Y NG ++ +LFR+M + +LP+ TLA
Sbjct: 68 AHSIFNAI--ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 122 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAV 180
+ + L G+ H +++M D+ T+LV +Y K V K+F + ++
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
++ M++GY EAI VF+ + K S + +F ++S+++ + L R IH
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+++ + V ++N ++ Y+KC L A +F+ R+ ++W++M+TGY +G E
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
A+ LF + ++ T++ +L A S + L K++H + + L +L+
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
YAK G L AR F + ER + W +++ Y + + E L L+ MK I P++ T
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIRE----------------------------YTIVP 450
S+L ACS +E G Q+ I+ + P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 451 GE--VHYNCIIDLLSRAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIG-- 503
+ V +N +I LS GQ EA L + M + ++SAC G E G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWF 545
Query: 504 --EAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 536
++ QI L+P+ Y + ++L+ G+ E
Sbjct: 546 YFNMMSDQI-GLDPK-VDHYACMVDLLSRAGQLKE 578
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 302/572 (52%), Gaps = 44/572 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ Q + P RVT+ + L A+A +G ++EG+ H AI G + D I T+LL+ Y K G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL-DNILGTSLLNFYCKVG 323
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF +M V +WN +I+ Y+ G +A + + M K+ D +TLA
Sbjct: 324 LIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ + A + L GK + Y IR E D+V + ++D+Y+K + A+K+F+ KD
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+++N ++ Y ++ L EA+ +F+ M V PNV +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW---------------------- 479
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGH 295
N II + + G + A+ +F +M+S +L+SWT+M+ G V +G
Sbjct: 480 -------------NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF-HGKELSVNN 354
+EAI+ R +Q LR ++ ++ L A + L L + +H R H +S+
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
SL+ YAKCG +N A +F L NAM+ AYA++GN E + L+ ++ +KP
Sbjct: 587 SLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP 646
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D +T T++L+AC+H+G + + ++IF ++ + ++ P HY ++DLL+ AG+ +A L
Sbjct: 647 DNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706
Query: 475 VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRW 534
++ MP + + +L+++C TE+ + +++++L+ EP NS +YV ISN A G W
Sbjct: 707 IEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSW 766
Query: 535 DEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
DEV +R M K K LK PG S I++ + V
Sbjct: 767 DEVVKMREMMKAKGLKKKPGCSWIQITGEEGV 798
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 254/492 (51%), Gaps = 8/492 (1%)
Query: 26 LQEGRAIHGYAIRRG-FGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNP 84
L G+ IH ++ G F +E ET L+ Y KC +++A +F K+ + V SW
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRN--VFSWAA 143
Query: 85 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 144
+I G A F +M+ ++ PD + N +C L + G+ +HGY+++ G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 145 VEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 203
+E + ++L D+Y K V A K+F+ + +++AV +N +M GY++N EAI +F
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
+M K V P +SA +++ + + H + + + +++ Y K G
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 323
++YA +VF+RM +D+V+W +I+GYV G +++AI + +L++ E L+ D VTL +L+
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 324 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 383
A ++ L KEV C R ++ + ++++ YAKCG + A+ +F E+ L
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 443
WN +L AYA G E L+LF M+L + P+ +T+ I+ + +G V+E +F M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM- 502
Query: 444 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDT 500
+ I+P + + +++ + + G EA ++ M + ++ ++ LSAC
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 501 EIGEAIAKQILK 512
IG I I++
Sbjct: 563 HIGRTIHGYIIR 574
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 195/410 (47%), Gaps = 21/410 (5%)
Query: 83 NPLIAAYLH-------NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
+P +Y H NG+ EA L +M R + + C L GK
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 136 IHGYMIRMGVEPDMVA-----CTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGY 189
IH +++ G D A T LV Y+K D + A +F +LR ++ + ++
Sbjct: 92 IHARILKNG---DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 249
+ L A+ F EM++ + P+ + N+ A L+ R R +HGYV++ V
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 250 EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 309
+A+ + Y KCG L A VF+ + R+ V+W +++ GYV +G +EAI LF ++++
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 310 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLN 367
+ VT+ + L A + +G + K+ H + +G EL + SL+ Y K G +
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI--VNGMELDNILGTSLLNFYCKVGLIE 326
Query: 368 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
A +F +M E+ + +WN ++ Y G + + + M+L +K D +T ++++A +
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 428 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
+ ++ G ++ IR ++ V + ++D+ ++ G + +A + S
Sbjct: 387 RTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 303/590 (51%), Gaps = 47/590 (7%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN+ T LL + AKLG + +GR +H ++ GF V D T L+ MY K V A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFV-DVFTATALVSMYMKVKQVTDALK 87
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
V +M + S N ++ L NG +AF +F + +T+A+ + C ++
Sbjct: 88 VLDEM--PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI 145
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
+ G +H ++ G E ++ T+LV +YS+ + A +MFE++ +K V YN +
Sbjct: 146 E---GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+G ++N + +VF+ M K S PN F+N I+A + L +++ R +HG V++ ++
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEAIILFR 304
+ +I Y+KC + A +VF ++ +R+L+SW S+I+G + +G + A+ LF
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 305 LLQRENLRIDSVTLISLLQALSQLG----------------------CLSAV-------- 334
L E L+ DS T SL+ SQLG CL+++
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 335 -----KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS--WNAM 387
KE+H +A +++ V SLI Y KCG + AR +F + + WN M
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM 442
Query: 388 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 447
+ Y HG +++F ++ ++P TFT++L+ACSH G VE+G QIFR M EY
Sbjct: 443 ISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYG 502
Query: 448 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 507
P H C+IDLL R+G+L EA ++ M SS +LL +CR + D +GE A
Sbjct: 503 YKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEEAA 561
Query: 508 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSL 557
++ +LEP N + +V++S+I A RW++V IR + K+L PG SL
Sbjct: 562 MKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 158/326 (48%), Gaps = 13/326 (3%)
Query: 208 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 267
+S SPN F L+ + + L D+ R +H V++ + V A ++ Y K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
A V + M R + S + ++G + +G +A +F + ++SVT+ S+L
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC-- 142
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 387
G + ++HCL ++ E+ V SL++ Y++CG+ +A +F+++ + + ++NA
Sbjct: 143 -GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 388 LGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR-- 444
+ +G V +FN M K + +P+++TF + +TAC+ ++ G Q+ +++
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 445 -EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIG 503
++ + G +ID+ S+ AY + + T + + +++S + G E
Sbjct: 262 FQFETMVG----TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 504 EAIAKQILK--LEPRNSSSYVLISNI 527
+ +++ L+P +++ LIS
Sbjct: 318 VELFEKLDSEGLKPDSATWNSLISGF 343
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
+ P+ L SLL A + + +L+ G+ IHG+ I+ D T+L+DMY KCG A
Sbjct: 364 MVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAA-AERDIFVLTSLIDMYMKCGLSSWA 422
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F + WN +I+ Y +G+ A E+F + KV P L T + +C+
Sbjct: 423 RRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Query: 126 ELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 161
+ G I M G +P ++DL +
Sbjct: 483 HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGR 519
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 298/536 (55%), Gaps = 8/536 (1%)
Query: 30 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 89
+ I + ++ GF EI + L+D KCG + A VF M + + +WN LIA
Sbjct: 85 KTIQAHMLKSGFPA--EISGSKLVDASLKCGDIDYARQVFDGM--SERHIVTWNSLIAYL 140
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PD 148
+ + ++ EA E++R MI VLPD TL++ + ++L + HG + +G+E +
Sbjct: 141 IKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSN 200
Query: 149 MVACTALVDLYSKFDVTKARKM-FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 207
+ +ALVD+Y KF T+ K+ +R+ KD V+ ++ GY + EA+ F M+
Sbjct: 201 VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLV 260
Query: 208 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 267
V PN + +++ + +L+DI + IHG +++ + + + ++ Y +C +
Sbjct: 261 EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDD 320
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
+ VF + + VSWTS+I+G V +G + A+I FR + R++++ +S TL S L+ S
Sbjct: 321 SLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSN 380
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 387
L +++H + + ++ + LI Y KCG +MAR +F ++E + S N M
Sbjct: 381 LAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTM 440
Query: 388 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 447
+ +YA +G E L LF M ++P+++T S+L AC++S LVEEG ++F S ++
Sbjct: 441 IYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKI 500
Query: 448 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 507
++ + HY C++DLL RAG+L EA L + + TLLSAC+++ E+ E I
Sbjct: 501 MLTND-HYACMVDLLGRAGRLEEAEMLTTEVINP-DLVLWRTLLSACKVHRKVEMAERIT 558
Query: 508 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
++IL++EP + + +L+SN+ A G+W+ V +++ KD +LK P S +E++K+
Sbjct: 559 RKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKE 614
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 190/392 (48%), Gaps = 11/392 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ TL S+ A + L +E + HG A+ G V + + L+DMY K G + A
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
V ++ + + LI Y G+ EA + F+ M+ KV P+ T A+ ++SC L
Sbjct: 223 VLDRVEEKDVVLIT--ALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNL 280
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 186
+ +GK IHG M++ G E + + T+L+ +Y + V + ++F+ + + V + ++
Sbjct: 281 KDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLI 340
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
+G ++N A+ F +M++ S+ PN + + S+L R IHG V ++ +
Sbjct: 341 SGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD 400
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ +I Y KCG ARLVF+ + D++S +MI Y +G EA+ LF +
Sbjct: 401 RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS----LITTYAK 362
L+ + VT++S+L A + S + E C + +F ++ + N ++ +
Sbjct: 461 INLGLQPNDVTVLSVLLACNN----SRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGR 516
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
G+L A L ++ L W +L A +H
Sbjct: 517 AGRLEEAEMLTTEVINPDLVLWRTLLSACKVH 548
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 278/500 (55%), Gaps = 10/500 (2%)
Query: 77 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 136
T V SWN +IA +G + EA F M + P + AI +C+ L + GK
Sbjct: 39 TDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 137 HGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 195
H G + D+ +AL+ +YS + ARK+F+ + ++ V + M+ GY N
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 196 VEAINVFHEMIKMSVSPNVALFLN------LISAVSDLRDIRLARSIHGYVLRHQYITRV 249
++A+++F +++ + A+FL+ +ISA S + L SIH +V++ + V
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 250 EIANQIIHTYAKCGY--LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR-LL 306
+ N ++ YAK G + AR +F+++ +D VS+ S+++ Y G +EA +FR L+
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
+ + + +++TL ++L A+S G L K +H R ++ V S+I Y KCG++
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
AR F +M + + SW AM+ Y MHG+ A+ L+LF M ++P+ +TF S+L AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
SH+GL EG + F +M + + PG HY C++DLL RAG L +AY+L++ M S
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
+LL+ACR++ + E+ E ++ +L+ N Y+L+S+I A+ GRW +V +R + K+
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 547 KELKSTPGYSLIELDKQREV 566
+ L PG+SL+EL+ + V
Sbjct: 519 RGLVKPPGFSLLELNGEVHV 538
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 209/437 (47%), Gaps = 48/437 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKC 59
M+ LYP R + + A + L + G+ H A FG +IF + L+ MY C
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV--FGYQSDIFVSSALIVMYSTC 124
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI------HRKVLPD 113
G ++ A VF ++ + SW +I Y NG AL+A LF+ ++ + D
Sbjct: 125 GKLEDARKVFDEI--PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 114 LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKM 170
+ L + I +C+ + +SIH ++I+ G + + L+D Y+K V ARK+
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 171 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN-LISAVSDLRD 229
F+++ +KD V YN +M+ Y ++ + EA VF ++K V A+ L+ ++ AVS
Sbjct: 243 FDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGA 302
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
+R+ + IH V+R V + II Y KCG ++ AR F+RM+++++ SWT+MI G
Sbjct: 303 LRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAG 362
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
Y HGH +A+ LF + +R + +T +S+L A S G +H +R F+
Sbjct: 363 YGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG-------LHVEGWRWFN--- 412
Query: 350 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
A G+ + E L + M+ G + L MK+
Sbjct: 413 -----------AMKGRFGV---------EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 410 GNIKPDELTFTSILTAC 426
KPD + ++S+L AC
Sbjct: 453 ---KPDSIIWSSLLAAC 466
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 170/318 (53%), Gaps = 20/318 (6%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF--GVCDEIFETTLLDMYHKC 59
D ++ + + LVS++ A +++ + +IH + I+RGF GV TLLD Y K
Sbjct: 175 DDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS---VGNTLLDAYAKG 231
Query: 60 --GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLT 116
GGV +A +F ++ S+N +++ Y +G + EAFE+FR+++ KV+ + +T
Sbjct: 232 GEGGVAVARKIFDQIVDKDRV--SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR 175
L+ +L+ + L GK IH +IRMG+E D++ T+++D+Y K V ARK F+R++
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS----DLRDIR 231
NK+ + M+ GY + +A+ +F MI V PN F+++++A S + R
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGY 290
++ G R +E ++ + G+LQ A + RM+ + D + W+S++
Sbjct: 410 WFNAMKG---RFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAAC 466
Query: 291 VHHGHIDEA-IILFRLLQ 307
H +++ A I + RL +
Sbjct: 467 RIHKNVELAEISVARLFE 484
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 290/566 (51%), Gaps = 6/566 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + L P++ S++ A A + G+ +H I+ I + L+ MY +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQNALIAMYVRFN 217
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLAN 119
+ A+ VF + SW+ +IA + G EA ++M+ V P+ +
Sbjct: 218 QMSDASRVFYGIPMKDLI--SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKD 178
++ +C+ L +G IHG I+ + + +A +L D+Y++ + AR++F+++ D
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+NV++ G N EA++VF +M P+ +L+ A + + IH
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID 297
Y+++ ++ + + N ++ Y C L +F R+ D VSW +++T + H
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
E + LF+L+ D +T+ +LL+ ++ L +VHC + + E + N LI
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
YAKCG L AR +F M R + SW+ ++ YA G E L LF MK I+P+ +
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
TF +LTACSH GLVEEGL+++ +M E+ I P + H +C++DLL+RAG+L EA +
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 478 MPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 537
M TLLSAC+ G+ + + A+ ILK++P NS+++VL+ ++ A G W+
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 538 AHIRAMTKDKELKSTPGYSLIELDKQ 563
A +R+ K ++K PG S IE++ +
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWIEIEDK 721
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 230/470 (48%), Gaps = 7/470 (1%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T +SL+ A + SL +GR IH + + D I +L MY KCG ++ A VF
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKY-DTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
M + S+ +I Y NGQ EA L+ +M+ ++PD + I +CA +
Sbjct: 128 M--PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVG 185
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL 190
GK +H +I++ ++A AL+ +Y +F+ ++ A ++F + KD + ++ ++ G+
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 191 KNDLPVEAINVFHEMIKMSV-SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 249
+ EA++ EM+ V PN +F + + A S L IHG ++ +
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 250 EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 309
+ YA+CG+L AR VF+++ D SW +I G ++G+ DEA+ +F ++
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 310 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 369
D+++L SLL A ++ LS ++H + +L+V NSL+T Y C L
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 370 RYLFQQMTERCLT-SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
LF+ + SWN +L A H E+L+LF M + +PD +T ++L C
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVE 485
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
++ G Q+ ++ + P + N +ID+ ++ G L +A + SM
Sbjct: 486 ISSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 194/403 (48%), Gaps = 5/403 (1%)
Query: 94 QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT 153
+ALEAF+ ++ K+ L T + I +C+ L G+ IH +++ + D +
Sbjct: 49 EALEAFDFAQKNSSFKI--RLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 154 ALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
++ +Y K + AR++F+ + ++ V Y ++TGY +N EAI ++ +M++ + P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
+ F ++I A + D+ L + +H V++ + + + N +I Y + + A VF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAII-LFRLLQRENLRIDSVTLISLLQALSQLGCL 331
+ +DL+SW+S+I G+ G EA+ L +L + S L+A S L
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 332 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAY 391
++H L ++ SL YA+CG LN AR +F Q+ SWN ++
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 392 AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPG 451
A +G E + +F+ M+ PD ++ S+L A + + +G+QI S I ++ +
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI-HSYIIKWGFLAD 405
Query: 452 EVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 494
N ++ + + L +NL + + S + T+L+AC
Sbjct: 406 LTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 302/574 (52%), Gaps = 18/574 (3%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCG 60
++ L ++ T L + L G +HG + G ++F L+DMY KCG
Sbjct: 140 REANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLS--QQVFLINVLIDMYSKCG 197
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA-N 119
+ A ++F + + SWN LI+ Y+ G A E L +M HR L +L T A
Sbjct: 198 KLDQAMSLFDRCDERDQV--SWNSLISGYVRVGAAEEPLNLLAKM-HRDGL-NLTTYALG 253
Query: 120 AILS--CAELD--YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERL 174
++L C L+ ++ G +IH Y ++G+E D+V TAL+D+Y+K + +A K+F +
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM 313
Query: 175 RNKDAVIYNVMMTGYLKND-----LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
+K+ V YN M++G+L+ D EA +F +M + + P+ + F ++ A S +
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT 373
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
+ R IH + ++ + + I + +I YA G + F +D+ SWTSMI
Sbjct: 374 LEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDC 433
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
+V + ++ A LFR L ++R + T+ ++ A + LS+ +++ ++
Sbjct: 434 HVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAF 493
Query: 350 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
SV S I+ YAK G + +A +F ++ + +++AM+ + A HG+ E L +F MK
Sbjct: 494 TSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKT 553
Query: 410 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 469
IKP++ F +L AC H GLV +GL+ F+ M +Y I P E H+ C++DLL R G+L+
Sbjct: 554 HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLS 613
Query: 470 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 529
+A NL+ S LLS+CR+Y D+ IG+ +A+++++LEP S SYVL+ NI
Sbjct: 614 DAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYN 673
Query: 530 EGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
+ G +R + +D+ +K P S I + Q
Sbjct: 674 DSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQ 707
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 232/522 (44%), Gaps = 46/522 (8%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 75
L AAK GS+ G+ HG+ I+ LL+MY KC + A +F +M
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNP-CLYLLNNLLNMYCKCRELGFARQLFDRM--P 109
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
+ S+N LI+ Y G +A ELF + + D T A A+ C E L G+
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 194
+HG ++ G+ + L+D+YSK + +A +F+R +D V +N +++GY++
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 195 PVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRD--IRLARSIHGYVLRHQYITRVEI 251
E +N+ +M + ++ AL L + +L + I +IH Y + + +
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI-----DEAIILFRLL 306
++ YAK G L+ A +F+ M S+++V++ +MI+G++ I EA LF +
Sbjct: 290 RTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDM 349
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
QR L T +L+A S L +++H L + + + ++LI YA G
Sbjct: 350 QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 409
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
F +++ + SW +M+ + + LF + +I+P+E T + +++AC
Sbjct: 410 EDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC 469
Query: 427 SHSGLVEEGLQI----FRSMIREYTIV--------------------------PGEVHYN 456
+ + G QI +S I +T V P Y+
Sbjct: 470 ADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYS 529
Query: 457 CIIDLLSRAGQLTEAYNLVKSMPS----THSSAALCTLLSAC 494
+I L++ G EA N+ +SM + + A L L++ C
Sbjct: 530 AMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 197/422 (46%), Gaps = 42/422 (9%)
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 191
GK HG+MI+ + P + L+++Y K ++ AR++F+R+ ++ + +N +++GY +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
+A+ +F E + ++ + + + + D+ L +HG V+ + +V +
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
N +I Y+KCG L A +F+R RD VSW S+I+GYV G +E + L + R+ L
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 312 RIDSVTLISLLQALS---QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 368
+ + L S+L+A G + +HC T + ++ V +L+ YAK G L
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 369 ARYLFQQMTERCLTSWNAMLGAYAMHGNY-----AEVLKLFNHMKLGNIKPDELTFTSIL 423
A LF M + + ++NAM+ + +E KLF M+ ++P TF+ +L
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 424 TACSHSGLVEEGLQI--------FRS-------MIREYTIVPGE---------------V 453
ACS + +E G QI F+S +I Y ++
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIA 425
Query: 454 HYNCIIDLLSRAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIGEAIAKQI 510
+ +ID + QL A++L + + S+H + ++SAC + GE I
Sbjct: 426 SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYA 485
Query: 511 LK 512
+K
Sbjct: 486 IK 487
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 269/525 (51%), Gaps = 37/525 (7%)
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
S V +W +I + +A F +M PD + + SC + L G+S
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSK---------------------------------- 161
+HG+++R+G++ D+ AL+++Y+K
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 162 ---FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 218
F + R++FE + KD V YN ++ GY ++ + +A+ + EM + P+
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
+++ S+ D+ + IHGYV+R + V I + ++ YAK ++ + VF+R+ R
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 279 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 338
D +SW S++ GYV +G +EA+ LFR + ++ +V S++ A + L L K++H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 339 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 398
R G + + ++L+ Y+KCG + AR +F +M SW A++ +A+HG+
Sbjct: 367 GYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGH 426
Query: 399 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 458
E + LF MK +KP+++ F ++LTACSH GLV+E F SM + Y + HY +
Sbjct: 427 EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486
Query: 459 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 518
DLL RAG+L EAYN + M + + TLLS+C ++ + E+ E +A++I ++ N
Sbjct: 487 ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM 546
Query: 519 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
+YVL+ N+ A GRW E+A +R + K L+ P S IE+ +
Sbjct: 547 GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNK 591
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 161/308 (52%), Gaps = 18/308 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M L P+ TL S+L ++ + +G+ IHGY IR+G D ++L+DMY K
Sbjct: 233 MGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SDVYIGSSLVDMYAKSA 291
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ + VF ++ SWN L+A Y+ NG+ EA LFRQM+ KV P + ++
Sbjct: 292 RIEDSERVFSRLYCRDGI--SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
I +CA L L GK +HGY++R G ++ +ALVD+YSK ++ ARK+F+R+ D
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V + ++ G+ + EA+++F EM + V PN F+ +++A S + L GY
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS---HVGLVDEAWGY 466
Query: 240 VLRHQYITRVEIANQIIHTYA-------KCGYLQYARLVFNRMRSRDLVS-WTSMITGYV 291
+T+V NQ + YA + G L+ A ++M S W+++++
Sbjct: 467 F---NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 292 HHGHIDEA 299
H +++ A
Sbjct: 524 VHKNLELA 531
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 128/299 (42%), Gaps = 40/299 (13%)
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
+S + AL LI + ++ A+ +H +R Q ++ A+ +I Y L A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEAL 59
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
L+F ++S +++W S+I + +A+ F ++ D S+L++ + +
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK---------CGK--------------- 365
L + VH R +L N+L+ YAK G
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 366 ------------LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
++ R +F+ M + + S+N ++ YA G Y + L++ M ++K
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEA 471
PD T +S+L S V +G +I +IR+ + +V+ + ++D+ +++ ++ ++
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDS 296
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 284/560 (50%), Gaps = 6/560 (1%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
D + P+ L +L A + ++ G ++H YA++ + ++LLDMY + G +
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKI 159
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
+ VF +M + +W +I +H G+ E F +M + L D T A A+
Sbjct: 160 DKSCRVFSEMPFRNAV--TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 181
+CA L + +GK+IH ++I G + +L +Y++ ++ +FE + +D V
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+ ++ Y + V+A+ F +M V PN F ++ SA + L + +H VL
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
+ ++N ++ Y+ CG L A ++F MR RD++SW+++I GY G +E
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
F +++ + L SLL + + ++VH L + +V +SLI Y+
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYS 457
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH-MKLGNIKPDELTFT 420
KCG + A +F + + S AM+ YA HG E + LF +K+G +PD +TF
Sbjct: 458 KCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FRPDSVTFI 516
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
S+LTAC+HSG ++ G F M Y + P + HY C++DLL RAG+L++A ++ M
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSW 576
Query: 481 THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHI 540
TLL AC+ GD E G A++IL+L+P +++ V ++NI + G +E A++
Sbjct: 577 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANV 636
Query: 541 RAMTKDKELKSTPGYSLIEL 560
R K K + PG+S I++
Sbjct: 637 RKNMKAKGVIKEPGWSSIKI 656
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 202/415 (48%), Gaps = 6/415 (1%)
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--IHRKVLPDLLTL 117
G ++ A VF KM + SW +I Y+ + EA LF M + V PD L
Sbjct: 54 GNLRAARQVFDKM--PHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRN 176
+ + +C + + +G+S+H Y ++ + + ++L+D+Y + + K+ ++F +
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
++AV + ++TG + E + F EM + + F + A + LR ++ ++I
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H +V+ ++T + +AN + Y +CG +Q +F M RD+VSWTS+I Y G
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
+A+ F ++ + + T S+ A + L L +++HC LSV+NS+
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
+ Y+ CG L A LFQ M R + SW+ ++G Y G E K F+ M+ KP +
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
S+L+ + ++E G Q+ ++ + + + +I++ S+ G + EA
Sbjct: 412 FALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 22/313 (7%)
Query: 249 VEIANQI---------IHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
V I+NQ+ + + G L+ AR VF++M D+VSWTS+I YV + DEA
Sbjct: 31 VRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEA 90
Query: 300 IILFRLLQREN--LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
+ILF ++ + + D+ L +L+A Q ++ + +H + + V +SL+
Sbjct: 91 LILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLL 150
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
Y + GK++ + +F +M R +W A++ G Y E L F+ M D
Sbjct: 151 DMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTY 210
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL----SRAGQLTEAYN 473
TF L AC+ V+ G I + IV G V C+ + L + G++ +
Sbjct: 211 TFAIALKACAGLRQVKYG-----KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLC 265
Query: 474 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 533
L ++M + +++ R+ + + E K P N ++ + + A R
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 534 --WDEVAHIRAMT 544
W E H ++
Sbjct: 326 LVWGEQLHCNVLS 338
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ P L SLL + + ++ GR +H A+ G + ++L++MY KCG
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ-NSTVRSSLINMYSKCG 460
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+K A+ +FG+ + + S +I Y +G++ EA +LF + + PD +T +
Sbjct: 461 SIKEASMIFGETDRDD--IVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 121 ILSC---AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR- 175
+ +C +LD H ++ M + C +VDL + ++ A KM +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGC--MVDLLCRAGRLSDAEKMINEMSW 576
Query: 176 NKDAVIYNVMM 186
KD V++ ++
Sbjct: 577 KKDDVVWTTLL 587
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 278/552 (50%), Gaps = 7/552 (1%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 75
LL A S++ GR +H ++ L++MY K + A V A
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
+ V SW LI+ NG A F +M V+P+ T A + A L GK
Sbjct: 72 N--VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 136 IHGYMIRMGVEPDM-VACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKND 193
IH ++ G D+ V C+A D+Y K + ARK+F+ + ++ +N ++ + +
Sbjct: 130 IHALAVKCGRILDVFVGCSAF-DMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
P EAI F E ++ PN F ++A SD + L +HG VLR + T V + N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 254 QIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 313
+I Y KC ++ + ++F M +++ VSW S++ YV + ++A +L+ +++ +
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
+ S+L A + + L + +H +A + + V ++L+ Y KCG + + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGL 431
+M E+ L + N+++G YA G L LF M + P+ +TF S+L+ACS +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 491
VE G++IF SM Y I PG HY+CI+D+L RAG + AY +K MP + + L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 492 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 551
+ACR++G ++G A+ + KL+P++S ++VL+SN A GRW E +R K +K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 552 TPGYSLIELDKQ 563
GYS I + Q
Sbjct: 549 GAGYSWITVKNQ 560
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 188/401 (46%), Gaps = 10/401 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + PN T A A L G+ IH A++ G + D + DMY K
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG-RILDVFVGCSAFDMYCKTR 157
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
A +F ++ + +WN I+ + +G+ EA E F + P+ +T
Sbjct: 158 LRDDARKLFDEI--PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAF 215
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARK-MFERLRNKDA 179
+ +C++ +L G +HG ++R G + D+ C L+D Y K ++ + +F + K+A
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V + ++ Y++N +A ++ K V + + +++SA + + + L RSIH +
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
++ + + + ++ Y KCG ++ + F+ M ++LV+ S+I GY H G +D A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 300 IILFRLLQRENL--RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NS 355
+ LF + + +T +SLL A S+ G + ++ + R+ +G E +
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSC 454
Query: 356 LITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHG 395
++ + G + A ++M + ++ W A+ A MHG
Sbjct: 455 IVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 250/435 (57%), Gaps = 8/435 (1%)
Query: 134 KSIHGYMIRMGVEPDMVACTA-----LVDLYSKFDVTKARKMFERLRNK-DAVIYNVMMT 187
+ IH + IR GV LV L S ++ A K+F ++ + I+N ++
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 188 GYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY + + A +++ EM + V P+ + LI AV+ + D+RL +IH V+R +
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ + + N ++H YA CG + A VF++M +DLV+W S+I G+ +G +EA+ L+ +
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
+ ++ D T++SLL A +++G L+ K VH + + L +N L+ YA+CG++
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTA 425
A+ LF +M ++ SW +++ A++G E ++LF +M+ + P E+TF IL A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
CSH G+V+EG + FR M EY I P H+ C++DLL+RAGQ+ +AY +KSMP +
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 486 ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 545
TLL AC ++GD+++ E QIL+LEP +S YVL+SN+ A RW +V IR
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 546 DKELKSTPGYSLIEL 560
+K PG+SL+E+
Sbjct: 454 RDGVKKVPGHSLVEV 468
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 201/407 (49%), Gaps = 23/407 (5%)
Query: 23 LGSLQEGRAIHGYAIRRGFGVCD-EIFETTLLDMYHKCGGVKMAAA--VFGKMNATSTTV 79
+ S+ + R IH ++IR G + D E+ + + + M+ A VF K+ V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE-KPINV 85
Query: 80 GSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 138
WN LI Y G ++ AF L+R+M + V PD T I + + + G++IH
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 139 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 197
+IR G + +L+ LY+ DV A K+F+++ KD V +N ++ G+ +N P E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 198 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
A+ ++ EM + P+ ++L+SA + + + L + +H Y+++ + +N ++
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR-ENLRIDSV 316
YA+CG ++ A+ +F+ M ++ VSWTS+I G +G EAI LF+ ++ E L +
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 317 TLISLLQALSQLGCLSA-------VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 369
T + +L A S G + ++E + + R H ++ A+ G++ A
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH------FGCMVDLLARAGQVKKA 379
Query: 370 -RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
Y+ + + W +LGA +HG+ L F +++ ++P+
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 10/326 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T L+ A + ++ G IH IR GFG + + +LL +Y CG V A
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYV-QNSLLHLYANCGDVASAYK 177
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF KM +WN +I + NG+ EA L+ +M + + PD T+ + + +CA++
Sbjct: 178 VFDKMPEKDLV--AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKI 235
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 186
L GK +H YMI++G+ ++ + L+DLY++ V +A+ +F+ + +K++V + ++
Sbjct: 236 GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 187 TGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
G N EAI +F M + P F+ ++ A S ++ + +R +Y
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEY 354
Query: 246 I--TRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA-II 301
R+E ++ A+ G ++ A M + ++V W +++ HG D A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQ 327
++LQ E L+S + A Q
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQ 440
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + P+ T+VSLL A AK+G+L G+ +H Y I+ G + LLD+Y +CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL-TRNLHSSNVLLDLYARCG 271
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLAN 119
V+ A +F +M ++ SW LI NG EA ELF+ M + +LP +T
Sbjct: 272 RVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 329
Query: 120 AILSCAELDYLCHGKSIHGYMIRM----GVEPDMVACTALVDLYSKFDVTKARKMFERLR 175
+ +C+ + G Y RM +EP + +VDL ++ + +K +E ++
Sbjct: 330 ILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFGCMVDLLAR--AGQVKKAYEYIK 384
Query: 176 N----KDAVIYNVMM 186
+ + VI+ ++
Sbjct: 385 SMPMQPNVVIWRTLL 399
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 296/574 (51%), Gaps = 26/574 (4%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 74
S+L + A L L+ G +H +A++ F D I T LDMY KC ++ A +F N+
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAA-DGIVRTATLDMYAKCDNMQDAQILFD--NS 342
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
+ S+N +I Y +A LF +++ + D ++L+ +CA + L G
Sbjct: 343 ENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND 193
I+G I+ + D+ A +D+Y K + +A ++F+ +R +DAV +N ++ + +N
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
E + +F M++ + P+ F +++ A + + IH +++ + +
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 254 QIIHTYAKCGYLQYARLVFNRMRSRD--------------------LVSWTSMITGYVHH 293
+I Y+KCG ++ A + +R R VSW S+I+GYV
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
++A +LF + + D T ++L + L K++H + ++ +
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
++L+ Y+KCG L+ +R +F++ R +WNAM+ YA HG E ++LF M L NIK
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 473
P+ +TF SIL AC+H GL+++GL+ F M R+Y + P HY+ ++D+L ++G++ A
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALE 761
Query: 474 LVKSMPSTHSSAALCTLLSACRLY-GDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 532
L++ MP TLL C ++ + E+ E +L+L+P++SS+Y L+SN+ A+ G
Sbjct: 762 LIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 821
Query: 533 RWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
W++V+ +R + +LK PG S +EL + V
Sbjct: 822 MWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHV 855
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 251/501 (50%), Gaps = 39/501 (7%)
Query: 7 YPNRVTLVS------LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ N+V VS + AK G+L+ G+ H + I GF + LL +Y
Sbjct: 39 FLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL-NCLLQVYTNSR 97
Query: 61 GVKMAAAVFGKM------------NATSTT-----------------VGSWNPLIAAYLH 91
A+ VF KM N S + V SWN +++ YL
Sbjct: 98 DFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQ 157
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
NG++L++ E+F M + D T A + C+ L+ G IHG ++R+G + D+VA
Sbjct: 158 NGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVA 217
Query: 152 CTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 210
+AL+D+Y+K ++ ++F+ + K++V ++ ++ G ++N+L A+ F EM K++
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
+ +++ +++ + + L ++RL +H + L+ + + + YAKC +Q A++
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 337
Query: 271 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 330
+F+ + + S+ +MITGY H +A++LF L L D ++L + +A + +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
LS +++ L ++ ++ V N+ I Y KC L A +F +M R SWNA++ A
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
+ +G E L LF M I+PDE TF SIL AC+ G + G++I S+++
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASN 516
Query: 451 GEVHYNCIIDLLSRAGQLTEA 471
V + +ID+ S+ G + EA
Sbjct: 517 SSVGCS-LIDMYSKCGMIEEA 536
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 220/457 (48%), Gaps = 27/457 (5%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
+ ++L + A A + L EG I+G AI+ + D +DMY KC + A V
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL-DVCVANAAIDMYGKCQALAEAFRV 439
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F +M SWN +IAA+ NG+ E LF M+ ++ PD T + + +C
Sbjct: 440 FDEMRRRDAV--SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-G 496
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-----------------FDVTKARKMF 171
L +G IH +++ G+ + +L+D+YSK +V+ +
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 172 ERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL 227
E++ NK V +N +++GY+ + +A +F M++M ++P+ + ++ ++L
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 228 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 287
L + IH V++ + + V I + ++ Y+KCG L +RL+F + RD V+W +MI
Sbjct: 617 ASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMI 676
Query: 288 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH- 346
GY HHG +EAI LF + EN++ + VT IS+L+A + +G + E + R +
Sbjct: 677 CGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGL 736
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
+L ++++ K GK+ A L ++M E W +LG +H N EV +
Sbjct: 737 DPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEAT 796
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
L D +T + + +G+ E+ + R+M
Sbjct: 797 AALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 183/418 (43%), Gaps = 42/418 (10%)
Query: 102 FRQMIHRKVLPDLLTLANAILS---------CAELDYLCHGKSIHGYMIRMGVEP----- 147
+R++ D L N++ + CA+ L GK H +MI G P
Sbjct: 27 YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVL 86
Query: 148 --------------------------DMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 180
D+V+ +++ YSK D+ KA F + +D V
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N M++GYL+N +++I VF +M + + + F ++ S L D L IHG V
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
+R T V A+ ++ YAK + VF + ++ VSW+++I G V + + A+
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
F+ +Q+ N + S+L++ + L L ++H ++ + V + + Y
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AKC + A+ LF S+NAM+ Y+ + + L LF+ + + DE++ +
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ AC+ + EGLQI+ I+ + V N ID+ + L EA+ + M
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA-NAAIDMYGKCQALAEAFRVFDEM 443
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 299/550 (54%), Gaps = 13/550 (2%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG-GVKMAAAVF-GKM 72
SLL K+ S G H + ++ G D +LL +Y K G G++ VF G+
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLET-DRNVGNSLLSLYFKLGPGMRETRRVFDGRF 124
Query: 73 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH 132
+ SW +++ Y+ + ++A E+F +M+ + + TL++A+ +C+EL +
Sbjct: 125 VKDAI---SWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYS-KFDVTKARKMFERLRNKDAVIYNVMMTGYLK 191
G+ HG +I G E + + L LY + AR++F+ + D + + +++ + K
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 192 NDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
NDL EA+ +F+ M + + P+ + F +++A +LR ++ + IHG ++ + + V
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+ + ++ Y KCG ++ AR VFN M ++ VSW++++ GY +G ++AI +FR ++ ++
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
L ++L+A + L + KE+H R + V ++LI Y K G ++ A
Sbjct: 362 L----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
++ +M+ R + +WNAML A A +G E + FN M IKPD ++F +ILTAC H+G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
+V+EG F M + Y I PG HY+C+IDLL RAG EA NL++ + ++ L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 491 LSACRLYGD-TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 549
L C D + + E IAK++++LEP+ SYVL+SN+ GR + +IR + + +
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 550 KSTPGYSLIE 559
T G S I+
Sbjct: 598 AKTVGQSWID 607
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 190/390 (48%), Gaps = 10/390 (2%)
Query: 93 GQALEAFELFRQMIHRKVLPDLLTLANAIL-SCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
GQ EA + H +P L ++L +C ++ HG H ++++ G+E D
Sbjct: 40 GQLTEAIRILNS-THSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNV 98
Query: 152 CTALVDLYSKF--DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
+L+ LY K + + R++F+ KDA+ + MM+GY+ V+A+ VF EM+
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
+ N + + A S+L ++RL R HG V+ H + I++ + + Y AR
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR-ENLRIDSVTLISLLQALSQL 328
VF+ M D++ WT++++ + + +EA+ LF + R + L D T ++L A L
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 329 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAML 388
L KE+H G + V +SL+ Y KCG + AR +F M+++ SW+A+L
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 389 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 448
G Y +G + + +++F M+ + D F ++L AC+ V G +I +R
Sbjct: 339 GGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR-GC 393
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ + +IDL ++G + A + M
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 196/400 (49%), Gaps = 13/400 (3%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
L N TL S + A ++LG ++ GR HG I GF + +TL +Y A
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF-EWNHFISSTLAYLYGVNREPVDA 217
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR--KVLPDLLTLANAILS 123
VF +M V W +++A+ N EA LF M HR ++PD T + +
Sbjct: 218 RRVFDEM--PEPDVICWTAVLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGTVLTA 274
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 182
C L L GK IHG +I G+ ++V ++L+D+Y K V +AR++F + K++V +
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
+ ++ GY +N +AI +F EM + ++ F ++ A + L +RL + IHG +R
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVR 390
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
V + + +I Y K G + A V+++M R++++W +M++ +G +EA+
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSF 450
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS-LITTYA 361
F + ++ ++ D ++ I++L A G + + L +++ K + + S +I
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510
Query: 362 KCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGNYAEV 400
+ G A L ++ R S W +LG A + + + V
Sbjct: 511 RAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRV 550
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 262/474 (55%), Gaps = 17/474 (3%)
Query: 98 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 157
A L+R+M + PD T ++CA+L+ + G+S+H + ++G+E D+ +L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 158 LYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
+Y+K V ARK+F+ + +D V +N M++GY + +A+++F +M + P+
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
++++ A S L D+R R + + + + +++I Y KCG L AR VFN+M
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
+D V+WT+MIT Y +G EA LF +++ + D+ TL ++L A +G L K+
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 337 VHCLTYRAFHGKELS------VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
+ H ELS V L+ Y KCG++ A +F+ M + +WNAM+ A
Sbjct: 356 IET------HASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
YA G+ E L LF+ M ++ P ++TF +L+AC H+GLV +G + F M + +VP
Sbjct: 410 YAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 466
Query: 451 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 510
HY IIDLLSRAG L EA+ ++ P L +L AC D I E + +
Sbjct: 467 KIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRML 526
Query: 511 LKL-EPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
+++ E +N+ +YV+ SN+LA+ WDE A +RA+ +D+ + TPG S IE++ +
Sbjct: 527 MEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGE 580
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 158/330 (47%), Gaps = 7/330 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ L P++ T + A AKL + GR++H + G D +L+ MY KCG
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLER-DVHINHSLIMMYAKCG 181
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A +F ++ T SWN +I+ Y G A +A +LFR+M PD TL +
Sbjct: 182 QVGYARKLFDEITERDTV--SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSM 239
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ +C+ L L G+ + I + + L+ +Y K D+ AR++F ++ KD
Sbjct: 240 LGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDR 299
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V + M+T Y +N EA +F EM K VSP+ ++SA + + L + I +
Sbjct: 300 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+ +A ++ Y KCG ++ A VF M ++ +W +MIT Y H GH EA
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEA 419
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLG 329
++LF R ++ +T I +L A G
Sbjct: 420 LLLF---DRMSVPPSDITFIGVLSACVHAG 446
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 152/339 (44%), Gaps = 44/339 (12%)
Query: 202 FHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK 261
F E + + + L +V+ LR I+ +H VE N +I +
Sbjct: 28 FEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHS----------VEKPNFLIPKAVE 77
Query: 262 CGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII-LFRLLQRENLRIDSVTLIS 320
G Y+ +F+ + S+ MI G + + EA + L+R ++ L+ D T
Sbjct: 78 LGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNF 137
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
+ A ++L + + VH ++ +++ +N+SLI YAKCG++ AR LF ++TER
Sbjct: 138 VFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERD 197
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG------LVEE 434
SWN+M+ Y+ G + + LF M+ +PDE T S+L ACSH G L+EE
Sbjct: 198 TVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE 257
Query: 435 -------GLQIF--RSMIREY---------------TIVPGEVHYNCIIDLLSRAGQLTE 470
GL F +I Y I V + +I + S+ G+ +E
Sbjct: 258 MAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE 317
Query: 471 AYNLVKSMPSTHSS---AALCTLLSACRLYGDTEIGEAI 506
A+ L M T S L T+LSAC G E+G+ I
Sbjct: 318 AFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQI 356
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 8/294 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+++ P+ TLVS+L A + LG L+ GR + AI + G+ + L+ MY KCG
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST-FLGSKLISMYGKCG 282
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF +M +W +I Y NG++ EAF+LF +M V PD TL+
Sbjct: 283 DLDSARRVFNQMIKKDRV--AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTV 340
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ +C + L GK I + + ++ ++ T LVD+Y K V +A ++FE + K+
Sbjct: 341 LSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE 400
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHG 238
+N M+T Y EA+ +F +MSV P+ F+ ++SA + R H
Sbjct: 401 ATWNAMITAYAHQGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHE 457
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
+ ++E II ++ G L A R + + I G H
Sbjct: 458 MSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH 511
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 301/555 (54%), Gaps = 15/555 (2%)
Query: 15 SLLHAAAKLGSLQEGRA----IHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVF 69
SL A KL S Q + IHG +I GF C + + L+D+Y K G VK A +F
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGF--CSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 70 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 129
++ + V SW +I+ + G +A LF++M V + T + + SC +L
Sbjct: 71 DRI--SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC 128
Query: 130 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTG 188
L G IHG + + +++ +AL+ LY++ + +AR F+ ++ +D V +N M+ G
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
Y N + ++F M+ P+ F +L+ A ++ + + +HG ++ +
Sbjct: 189 YTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH-IDEAIILFRLLQ 307
+ +++ Y KCG L A + + RDL+S T++ITG+ + +A +F+ +
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLITTYAKCGKL 366
R ++D V + S+L+ + + ++ +++H ++ + ++++ NSLI YAK G++
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
A F++M E+ + SW +++ Y HGN+ + + L+N M+ IKP+++TF S+L+AC
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS--THSS 484
SH+G E G +I+ +MI ++ I E H +CIID+L+R+G L EAY L++S + SS
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 488
Query: 485 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
+ L ACR +G+ ++ + A Q+L +EPR +Y+ ++++ A G WD + R +
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLM 548
Query: 545 KDK-ELKSTPGYSLI 558
K+ PGYSL+
Sbjct: 549 KESGSCNKAPGYSLV 563
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 198/409 (48%), Gaps = 22/409 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + N+ T S+L + LG L+EG IHG ++ +G + I + LL +Y +CG
Sbjct: 104 MHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG-SVEKGNCAGNLIVRSALLSLYARCG 162
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL--- 117
++ A F M SWN +I Y N A +F LF+ M+ PD T
Sbjct: 163 KMEEARLQFDSMKERDLV--SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSL 220
Query: 118 --ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 174
A+ ++ C E+ +HG I++G +LV+ Y K + A K+ E
Sbjct: 221 LRASIVVKCLEI-----VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGT 275
Query: 175 RNKDAVIYNVMMTGY-LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+ +D + ++TG+ +N+ +A ++F +MI+M + + +++ + + + +
Sbjct: 276 KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIG 335
Query: 234 RSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
R IHG+ L+ I V + N +I YAK G ++ A L F M+ +D+ SWTS+I GY
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
HG+ ++AI L+ ++ E ++ + VT +SLL A S G +++ T HG E
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIY-DTMINKHGIEARE 454
Query: 353 N--NSLITTYAKCGKLNMARYLFQQ---MTERCLTSWNAMLGAYAMHGN 396
+ +I A+ G L A L + + ++W A L A HGN
Sbjct: 455 EHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGN 503
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 16/299 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T SLL A+ + L+ +HG AI+ GFG + +L++ Y KCG + A
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIR-SLVNAYVKCGSLANAWK 270
Query: 68 VFGKMNATSTTVGSWNPLIAAY-LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+ + S LI + N +AF++F+ MI K D + +++ + C
Sbjct: 271 L--HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTT 328
Query: 127 LDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
+ + G+ IHG+ ++ + D+ +L+D+Y+K ++ A FE ++ KD +
Sbjct: 329 IASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTS 388
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL-RH 243
++ GY ++ +AI++++ M + PN FL+L+SA S L I+ ++ +H
Sbjct: 389 LIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKH 448
Query: 244 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV------SWTSMITGYVHHGHI 296
R E + II A+ GYL+ A + +RS++ + +W + + HG++
Sbjct: 449 GIEAREEHLSCIIDMLARSGYLEEA---YALIRSKEGIVSLSSSTWGAFLDACRRHGNV 504
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 292/568 (51%), Gaps = 40/568 (7%)
Query: 30 RAIHGYAIRRGFGVCDEIFETTLLDMY-HKCGG-VKMAAAVFGKMNATSTTVGSWNPLIA 87
+ +H +I RG + F+ L + + GG V A +F K+ V WN +I
Sbjct: 51 KQLHSQSITRGVAP-NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVV--WNNMIK 107
Query: 88 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD--YLCHGKSIHGYMIRMGV 145
+ E L+ M+ V PD T +L+ + D L GK +H ++++ G+
Sbjct: 108 GWSKVDCDGEGVRLYLNMLKEGVTPDSHTFP-FLLNGLKRDGGALACGKKLHCHVVKFGL 166
Query: 146 EPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
++ ALV +YS + AR +F+R +D +N+M++GY + E+I + E
Sbjct: 167 GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVE 226
Query: 205 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 264
M + VSP L ++SA S ++D L + +H YV + + + N +++ YA CG
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 265 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHI---------------------------- 296
+ A +F M++RD++SWTS++ GYV G++
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRA 346
Query: 297 ---DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
+E++ +FR +Q + D T++S+L A + LG L + + + ++ V
Sbjct: 347 GCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
N+LI Y KCG A+ +F M +R +W AM+ A +G E +K+F M+ +I+
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 473
PD++T+ +L+AC+HSG+V++ + F M ++ I P VHY C++D+L RAG + EAY
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 474 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 533
+++ MP +S LL A RL+ D + E AK+IL+LEP N + Y L+ NI A R
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 534 WDEVAHIRAMTKDKELKSTPGYSLIELD 561
W ++ +R D +K TPG+SLIE++
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVN 614
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 33/254 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY--------------AIRRGFGVCDE 46
M+ + P VTL+ +L A +K+ + +H Y A+ + C E
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 47 ------IFE----------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYL 90
IF T+++ Y + G +K+A F +M SW +I YL
Sbjct: 287 MDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI--SWTIMIDGYL 344
Query: 91 HNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV 150
G E+ E+FR+M ++PD T+ + + +CA L L G+ I Y+ + ++ D+V
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 151 ACTALVDLYSKFDVT-KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
AL+D+Y K + KA+K+F + +D + M+ G N EAI VF +M MS
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 210 VSPNVALFLNLISA 223
+ P+ +L ++SA
Sbjct: 465 IQPDDITYLGVLSA 478
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 14/242 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + P+ T+VS+L A A LGSL+ G I Y I + D + L+DMY KCG
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY-IDKNKIKNDVVVGNALIDMYFKCG 417
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF M+ +W ++ +NGQ EA ++F QM + PD +T
Sbjct: 418 CSEKAQKVFHDMDQRDKF--TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGV 475
Query: 121 ILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKFDVTKARKMFERLR---- 175
+ +C + + M +EP +V +VD+ + + K + +E LR
Sbjct: 476 LSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK--EAYEILRKMPM 533
Query: 176 NKDAVIYNVMM-TGYLKNDLPVEAINVFHEMIKMSVSPNV--ALFLNLISAVSDLRDIRL 232
N +++++ ++ L ND P+ + +++++ AL N+ + +D+R
Sbjct: 534 NPNSIVWGALLGASRLHNDEPMAELAA-KKILELEPDNGAVYALLCNIYAGCKRWKDLRE 592
Query: 233 AR 234
R
Sbjct: 593 VR 594
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 257/441 (58%), Gaps = 1/441 (0%)
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIY 182
CA + K+ HG +IR+ +E D+ L++ YSK V AR++F+ + + V +
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
N M+ Y +N + EA+++F EM + +++SA D + +H ++
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVK 190
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ + ++ YAKCG ++ A VF M+ + V+W+SM+ GYV + + +EA++L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLL 250
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 362
+R QR +L + TL S++ A S L L K++H + ++ G + V +S + YAK
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
CG L + +F ++ E+ L WN ++ +A H EV+ LF M+ + P+E+TF+S+
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
L+ C H+GLVEEG + F+ M Y + P VHY+C++D+L RAG L+EAY L+KS+P
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 542
+++ +LL++CR+Y + E+ E A+++ +LEP N+ ++VL+SNI A +W+E+A R
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490
Query: 543 MTKDKELKSTPGYSLIELDKQ 563
+ +D ++K G S I++ +
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDK 511
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 212/425 (49%), Gaps = 26/425 (6%)
Query: 7 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 66
+ NR + +L A+ G++ E +A HG IR D L++ Y KCG V++A
Sbjct: 58 FSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEG-DVTLLNVLINAYSKCGFVELAR 116
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA- 125
VF M S SWN +I Y N EA ++F +M + T+++ + +C
Sbjct: 117 QVFDGMLERSLV--SWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNV 184
D L K +H ++ ++ ++ TAL+DLY+K + K A ++FE +++K +V ++
Sbjct: 175 NCDAL-ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M+ GY++N EA+ ++ +MS+ N ++I A S+L + + +H + +
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+ + V +A+ + YAKCG L+ + ++F+ ++ ++L W ++I+G+ H E +ILF
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----NSLITTY 360
+Q++ + + VT SLL G + + L R +G LS N + ++
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM-RTTYG--LSPNVVHYSCMVDIL 410
Query: 361 AKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN--YAEVL--KLF--------NHM 407
+ G L+ A L + + + + W ++L + ++ N AEV KLF NH+
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHV 470
Query: 408 KLGNI 412
L NI
Sbjct: 471 LLSNI 475
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
+LQ ++ G + K H R ++++ N LI Y+KCG + +AR +F M ER
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
L SWN M+G Y + +E L +F M+ K E T +S+L+AC G+ + L+ +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKK 183
Query: 441 -SMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
+ T + ++ ++DL ++ G + +A + +SM S
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSS 228
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
Q L N+ TL S++ A + L +L EG+ +H + GFG + ++ +DMY KCG
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS-NVFVASSAVDMYAKCGS 313
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
++ + +F ++ + + WN +I+ + + + E LF +M + P+ +T ++ +
Sbjct: 314 LRESYIIFSEVQEKNLEL--WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 371
Query: 122 LSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK 161
C + G+ M G+ P++V + +VD+ +
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 278/524 (53%), Gaps = 14/524 (2%)
Query: 24 GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 83
GSL G+ +H I+ GF + + L+ MY C V A VF + + ++N
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVV-NALITMYFNCQVVVDACLVFEETDVAVRDQVTFN 261
Query: 84 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 143
+I L + E+ +FR+M+ + P LT + + SC+ G +HG I+
Sbjct: 262 VVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKT 317
Query: 144 GVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 202
G E + A + +YS F D A K+FE L KD V +N M++ Y + L A++V+
Sbjct: 318 GYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 203 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 262
M + V P+ F +L++ DL + + + +++ +++EI+N +I Y+K
Sbjct: 378 KRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKN 434
Query: 263 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI--DSVTLIS 320
G ++ A L+F R ++L+SW ++I+G+ H+G E + F L +RI D+ TL +
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
LL L + H R KE + N+LI Y++CG + + +F QM+E+
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
+ SWN+++ AY+ HG + + M+ G + PD TF+++L+ACSH+GLVEEGL+IF
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 440 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS--AALCTLLSACRLY 497
SM+ + ++ H++C++DLL RAG L EA +LVK T S L SAC +
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Query: 498 GDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 541
GD ++G+ +AK +++ E + S YV +SNI A G W E R
Sbjct: 675 GDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETR 718
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 150/610 (24%), Positives = 250/610 (40%), Gaps = 96/610 (15%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC--------------------- 44
L P++ ++ + A L G +H YAIR G +C
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGL-LCHSHVSNTLLSLYERLGNLASL 111
Query: 45 ----DEIFE------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ 94
DEI E TTLL K G ++ A VF KM V WN +I +G
Sbjct: 112 KKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKM-PERDDVAIWNAMITGCKESGY 170
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 154
+ ELFR+M V D A ILS + L GK +H +I+ G A
Sbjct: 171 HETSVELFREMHKLGVRHDKFGFAT-ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNA 229
Query: 155 LVDLYSKFD-VTKARKMFER--LRNKDAVIYNVMMTGY--LKNDLPVEAINVFHEMIKMS 209
L+ +Y V A +FE + +D V +NV++ G K D E++ VF +M++ S
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD---ESLLVFRKMLEAS 286
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
+ P F++++ + S + +HG ++ Y ++N + Y+ A
Sbjct: 287 LRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAH 343
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
VF + +DLV+W +MI+ Y A+ +++ + ++ D T SLL L
Sbjct: 344 KVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
L V+ C+ K + ++N+LI+ Y+K G++ A LF++ + L SWNA++
Sbjct: 404 VLEMVQA--CIIKFGLSSK-IEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIIS 460
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIK--PDELTFTSILTAC--------------------- 426
+ +G E L+ F+ + ++ PD T +++L+ C
Sbjct: 461 GFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ 520
Query: 427 --------------SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
S G ++ L++F M + V +N +I SR G+ A
Sbjct: 521 FKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV-----VSWNSLISAYSRHGEGENAV 575
Query: 473 NLVKSMPSTH----SSAALCTLLSACRLYGDTEIGEAIAKQILKLEP--RNSSSYVLISN 526
N K+M +A +LSAC G E G I +++ RN + + +
Sbjct: 576 NTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVD 635
Query: 527 ILAEGGRWDE 536
+L G DE
Sbjct: 636 LLGRAGHLDE 645
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 40/305 (13%)
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
N +TG ++ A+ +F ++ + ++ P+ I+ LRD +H Y +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS---------------- 285
R + ++N ++ Y + G L + F+ + D+ SWT+
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 286 ----------------MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
MITG G+ + ++ LFR + + +R D ++L ++ G
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYG 203
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ--MTERCLTSWNAM 387
L K+VH L +A SV N+LIT Y C + A +F++ + R ++N +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 388 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE--GLQIFRSMIRE 445
+ A E L +F M +++P +LTF S++ +CS + + + GL I ++ +
Sbjct: 264 IDGLAGF-KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAI-KTGYEK 321
Query: 446 YTIVP 450
YT+V
Sbjct: 322 YTLVS 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 5 RLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 64
R+ P+ TL +LL SL G H Y +R G + + L++MY +CG ++
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG-QFKETLIGNALINMYSQCGTIQN 542
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILS 123
+ VF +M + V SWN LI+AY +G+ A ++ M KV+PD T + + +
Sbjct: 543 SLEVFNQM--SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSA 600
Query: 124 CAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK 161
C+ + G I M+ GV ++ + LVDL +
Sbjct: 601 CSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGR 639
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 288/561 (51%), Gaps = 13/561 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M Q P+ TLV+LL + G + +GR++HG A + G + D + L+ Y KC
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL-DSQVKNALISFYSKCA 200
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A +F +M ST SWN +I AY +G EA +F+ M + V +T+ N
Sbjct: 201 ELGSAEVLFREMKDKSTV--SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL 258
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ + ++ H + +H +++ G+ D+ T+LV YS+ + A +++ +
Sbjct: 259 LSA-----HVSH-EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSI 312
Query: 180 VIYNVMMTGYL-KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V +++ Y K D+ + A+ F + ++ + + + ++ I + S+HG
Sbjct: 313 VGLTSIVSCYAEKGDMDI-AVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHG 371
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
Y ++ T+ + N +I Y+K ++ +F +++ L+SW S+I+G V G
Sbjct: 372 YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAST 431
Query: 299 AIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
A +F +++ L D++T+ SLL SQL CL+ KE+H T R E V +LI
Sbjct: 432 AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALI 491
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
YAKCG A +F+ + C +WN+M+ Y++ G L + M+ +KPDE+
Sbjct: 492 DMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEI 551
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
TF +L+AC+H G V+EG FR+MI+E+ I P HY ++ LL RA TEA L+
Sbjct: 552 TFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWK 611
Query: 478 MPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 537
M SA LLSAC ++ + E+GE +A+++ L+ +N YVL+SN+ A WD+V
Sbjct: 612 MDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDV 671
Query: 538 AHIRAMTKDKELKSTPGYSLI 558
+R M KD G S I
Sbjct: 672 VRVRNMMKDNGYDGYLGVSQI 692
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 175/361 (48%), Gaps = 11/361 (3%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL--DYLCHGKSIHGY 139
++ L+ + +H + +FR ++ + P+ T++ + + + + + +
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 140 MIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
+ + G++ + T+L++LY K VT A+ +F+ + +D V++N ++ GY +N +A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 258
+F M++ SP+ +NL+ + RS+HG + ++ N +I
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 259 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 318
Y+KC L A ++F M+ + VSW +MI Y G +EAI +F+ + +N+ I VT+
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 319 ISLLQA-LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT 377
I+LL A +S + +HCL + ++SV SL+ Y++CG L A L+
Sbjct: 256 INLLSAHVSH-------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAK 308
Query: 378 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 437
+ + +++ YA G+ + F+ + +K D + IL C S ++ G+
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS 368
Query: 438 I 438
+
Sbjct: 369 L 369
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 164/331 (49%), Gaps = 16/331 (4%)
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN---VALFLNLISAVSDLRDIRL- 232
+D ++ ++ + ++ I +F ++++ S++PN +++FL + + +L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQ--ATTTSFNSFKLQ 68
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
+ ++ + V + +++ Y K G + A+++F+ M RD V W ++I GY
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+G+ +A LF ++ ++ + TL++LL Q G +S + VH + ++ + V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
N+LI+ Y+KC +L A LF++M ++ SWN M+GAY+ G E + +F +M N+
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 413 KPDELTFTSILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
+ +T ++L+A SH L L + M+ + ++V ++ SR G L A
Sbjct: 249 EISPVTIINLLSAHVSHEPL--HCLVVKCGMVNDISVVTS------LVCAYSRCGCLVSA 300
Query: 472 YNLVKSMPSTHSSAALCTLLSACRLYGDTEI 502
L S S L +++S GD +I
Sbjct: 301 ERLYAS-AKQDSIVGLTSIVSCYAEKGDMDI 330
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 282/559 (50%), Gaps = 5/559 (0%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAA 66
P+ VT +LL +H +A++ GF + LL Y + + +A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+F ++ + ++N LI Y +G E+ LF +M P T + + +
Sbjct: 205 VLFEEIPEKDSV--TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 185
L G+ +H + G D ++D YSK D V + R +F+ + D V YNV+
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
++ Y + D +++ F EM M F ++S ++L +++ R +H L
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
+ + + N ++ YAKC + A L+F + R VSWT++I+GYV G + LF
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
++ NLR D T ++L+A + L K++H R+ + + + + L+ YAKCG
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
+ A +F++M +R SWNA++ A+A +G+ + F M ++PD ++ +LTA
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTA 562
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
CSH G VE+G + F++M Y I P + HY C++DLL R G+ EA L+ MP
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 486 ALCTLLSACRLYGDTEIGEAIAKQILKLEP-RNSSSYVLISNILAEGGRWDEVAHIRAMT 544
++L+ACR++ + + E A+++ +E R++++YV +SNI A G W++V ++
Sbjct: 623 MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAM 682
Query: 545 KDKELKSTPGYSLIELDKQ 563
+++ +K P YS +E++ +
Sbjct: 683 RERGIKKVPAYSWVEVNHK 701
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 225/477 (47%), Gaps = 13/477 (2%)
Query: 51 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK- 109
T++ + K G V A +F M TV +W L+ Y N EAF+LFRQM
Sbjct: 84 TMISGHVKTGDVSSARDLFDAM--PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 110 -VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-- 166
LPD +T + C + +H + +++G + + + V L S +V +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 167 -ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
A +FE + KD+V +N ++TGY K+ L E+I++F +M + P+ F ++ AV
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 226 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 285
L D L + +H + + + NQI+ Y+K + R++F+ M D VS+
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
+I+ Y + ++ FR +Q + ++L + L L +++HC A
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
L V NSL+ YAKC A +F+ + +R SW A++ Y G + LKLF
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
M+ N++ D+ TF ++L A + + G Q+ +IR + + ++D+ ++
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL-ENVFSGSGLVDMYAKC 500
Query: 466 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE--IGEAIAKQILK-LEPRNSS 519
G + +A + + MP ++ + L+SA GD E IG A AK I L+P + S
Sbjct: 501 GSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIG-AFAKMIESGLQPDSVS 555
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 15/236 (6%)
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-- 310
N +I + K G + AR +F+ M R +V+WT ++ Y + H DEA LFR + R +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKE-LSVNNSLITTYAKCGKLNM 368
D VT +LL + +AV +VH + F L+V+N L+ +Y + +L++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 369 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS- 427
A LF+++ E+ ++N ++ Y G Y E + LF M+ +P + TF+ +L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 428 -HS---GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
H G L + R+ ++ N I+D S+ ++ E L MP
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASV------GNQILDFYSKHDRVLETRMLFDEMP 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
+++ L + G +SA ++V Y K N++I+ + K G ++ AR LF M +R
Sbjct: 54 IVEDLLRRGQVSAARKV----YDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRT 109
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN--IKPDELTFTSILTACSHS 429
+ +W ++G YA + ++ E KLF M + PD +TFT++L C+ +
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 262/486 (53%), Gaps = 11/486 (2%)
Query: 82 WNPLIAAYLHNGQALE---AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 138
W+ LI + G L +F +R M V+P T + + +L + H
Sbjct: 70 WDSLIG-HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHA 127
Query: 139 YMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 195
++++ G++ D +L+ YS FD A ++F+ +KD V + M+ G+++N
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDF--ASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 196 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQ 254
EA+ F EM K V+ N ++++ A + D+R RS+HG L + V I +
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 255 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 314
++ Y KC A+ VF+ M SR++V+WT++I GYV D+ +++F + + ++ +
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN 305
Query: 315 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 374
TL S+L A + +G L + VHC + + +LI Y KCG L A +F+
Sbjct: 306 EKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE 365
Query: 375 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEE 434
++ E+ + +W AM+ +A HG + LF M ++ P+E+TF ++L+AC+H GLVEE
Sbjct: 366 RLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEE 425
Query: 435 GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 494
G ++F SM + + P HY C++DL R G L EA L++ MP ++ L +C
Sbjct: 426 GRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSC 485
Query: 495 RLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPG 554
L+ D E+G+ A +++KL+P +S Y L++N+ +E WDEVA +R KD+++ +PG
Sbjct: 486 LLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPG 545
Query: 555 YSLIEL 560
+S IE+
Sbjct: 546 FSWIEV 551
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 199/402 (49%), Gaps = 10/402 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + P+R T LL A KL + H + ++ G D +L+ Y G
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLD-SDPFVRNSLISGYSSSG 152
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
A+ +F A V +W +I ++ NG A EA F +M V + +T+ +
Sbjct: 153 LFDFASRLFD--GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 121 ILSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKFDV-TKARKMFERLRNKD 178
+ + +++ + G+S+HG + G V+ D+ ++LVD+Y K A+K+F+ + +++
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V + ++ GY+++ + + VF EM+K V+PN +++SA + + + R +H
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
Y++++ +I Y KCG L+ A LVF R+ +++ +WT+MI G+ HG+ +
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SL 356
A LF + ++ + VT +++L A + G + + + L+ + E ++ +
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACM 449
Query: 357 ITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNY 397
+ + + G L A+ L ++M E W A+ G+ +H +Y
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDY 491
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 250/439 (56%), Gaps = 2/439 (0%)
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIY 182
C L G+ +H ++++ D+V L+++Y+K + +ARK+FE++ +D V +
Sbjct: 70 CTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW 129
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
+++GY ++D P +A+ F++M++ SPN ++I A + R +HG+ ++
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ + V + + ++ Y + G + A+LVF+ + SR+ VSW ++I G+ ++A+ L
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 362
F+ + R+ R + SL A S G L K VH ++ N+L+ YAK
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
G ++ AR +F ++ +R + SWN++L AYA HG E + F M+ I+P+E++F S+
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
LTACSHSGL++EG + M ++ IVP HY ++DLL RAG L A ++ MP
Sbjct: 370 LTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 542
++A LL+ACR++ +TE+G A+ + +L+P + +V++ NI A GGRW++ A +R
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 543 MTKDKELKSTPGYSLIELD 561
K+ +K P S +E++
Sbjct: 489 KMKESGVKKEPACSWVEIE 507
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 194/396 (48%), Gaps = 11/396 (2%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
D+R Y +LL L +GR +H + ++ F D + TLL+MY KCG +
Sbjct: 59 DRRFYN------TLLKKCTVFKLLIQGRIVHAHILQSIF-RHDIVMGNTLLNMYAKCGSL 111
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
+ A VF KM +W LI+ Y + + +A F QM+ P+ TL++ I
Sbjct: 112 EEARKVFEKMPQRDFV--TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVI 181
+ A C G +HG+ ++ G + ++ +AL+DLY+++ + A+ +F+ L +++ V
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+N ++ G+ + +A+ +F M++ P+ + +L A S + + +H Y++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
+ N ++ YAK G + AR +F+R+ RD+VSW S++T Y HG EA+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
F ++R +R + ++ +S+L A S G L + L + E +++
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 362 KCGKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHGN 396
+ G LN A R++ + E W A+L A MH N
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
+LL+ + L + VH ++ ++ + N+L+ YAKCG L AR +F++M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
+W ++ Y+ H + L FN M P+E T +S++ A +
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 180/589 (30%), Positives = 291/589 (49%), Gaps = 72/589 (12%)
Query: 45 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
D+I TT++ Y G + +A VF K +N +I + HN A LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 105 MIHRKVLPDLLTLANAILSCAEL-DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 163
M H PD T A+ + A + D H ++ G ALV +YSK
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 164 VT-----KARKMFERLRNKDAVIYNVMMTGYLKN---DLPVEAINVFH------------ 203
+ ARK+F+ + KD + MMTGY+KN DL E +
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 204 -------------EMIKMSVSPNVAL----FLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
EM++ VS + L + ++I A + ++L + +H YVLR +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+ N ++ Y KCG AR +F +M ++DLVSW ++++GYV GHI EA ++F+ +
Sbjct: 319 S-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 307 QRENLRIDSVTLISLL-------QALSQLGCL-------------SAVKEVHCL----TY 342
+ +N+ + + +IS L + L C+ A+K L
Sbjct: 378 KEKNI-LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 343 RAFHGK--------ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
+ +H + LS N+LIT YAKCG + AR +F+ M SWNA++ A H
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 395 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 454
G+ AE + ++ M I+PD +T ++LTACSH+GLV++G + F SM Y I PG H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 514
Y +IDLL R+G+ ++A ++++S+P ++ LLS CR++G+ E+G A ++ L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 515 PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
P + +Y+L+SN+ A G+W+EVA +R + +D+ +K S IE++ Q
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 167/383 (43%), Gaps = 88/383 (22%)
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS------------ 277
++LAR++HG ++ + R I N++I Y K L YAR +F+ +
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 278 ---------------------RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
RD V + +MITG+ H+ AI LF ++ E + D+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 317 TLISLLQALSQLGCLSAVKEVHCLTYRAF-----HGKELSVNNSLITTYAKCGK----LN 367
T S+L L+ L A E C+ + A G SV+N+L++ Y+KC L+
Sbjct: 150 TFASVLAGLA----LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 368 MARYLFQQMTERCLTSW--------------------------------NAMLGAYAMHG 395
AR +F ++ E+ SW NAM+ Y G
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 455
Y E L++ M I+ DE T+ S++ AC+ +GL++ G Q+ ++R H+
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF---SFHF 322
Query: 456 -NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK-L 513
N ++ L + G+ EA + + MP+ + LLS G IGE AK I K +
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSG--HIGE--AKLIFKEM 377
Query: 514 EPRNSSSYVLISNILAEGGRWDE 536
+ +N S++++ + LAE G +E
Sbjct: 378 KEKNILSWMIMISGLAENGFGEE 400
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 46/331 (13%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR-GFGVCDEIFETTLLDMYHKCGGVKMAAA 67
+ T S++ A A G LQ G+ +H Y +RR F F+ +L+ +Y+KCG A A
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF---HFDNSLVSLYYKCGKFDEARA 341
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL---------------- 111
+F KM A SWN L++ Y+ +G EA +F++M + +L
Sbjct: 342 IFEKMPAKDLV--SWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 112 ---------------PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
P + AI SCA L C+G+ H ++++G + + A AL+
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 157 DLYSKFDVT-KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 215
+Y+K V +AR++F + D+V +N ++ ++ EA++V+ EM+K + P+
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA----NQIIHTYAKCGYLQYARLV 271
L +++A S + R Y + + R+ ++I + G A V
Sbjct: 520 TLLTVLTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESV 576
Query: 272 FNRMRSRDLVS-WTSMITGYVHHGHIDEAII 301
+ + W ++++G HG+++ II
Sbjct: 577 IESLPFKPTAEIWEALLSGCRVHGNMELGII 607
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 255/484 (52%), Gaps = 9/484 (1%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
S+N L+++Y + ++ + PD+ T +C + + GK IHG +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 141 IRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAI 199
+MG D+ +LV Y ++ A K+F + +D V + ++TG+ + L EA+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 200 NVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 259
+ F KM V PN+A ++ ++ + + + L + IHG +L+ + +E N +I Y
Sbjct: 193 DTFS---KMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTL 318
KC L A VF + +D VSW SMI+G VH EAI LF L+Q + ++ D L
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
S+L A + LG + + VH A + + +++ YAKCG + A +F +
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQ 437
+ + +WNA+LG A+HG+ E L+ F M KLG KP+ +TF + L AC H+GLV+EG +
Sbjct: 370 KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-FKPNLVTFLAALNACCHTGLVDEGRR 428
Query: 438 IFRSM-IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRL 496
F M REY + P HY C+IDLL RAG L EA LVK+MP +LSAC+
Sbjct: 429 YFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKN 488
Query: 497 YGD-TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 555
G E+ + I L +E +S YVL+SNI A RWD+VA IR + K K + PG
Sbjct: 489 RGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGS 548
Query: 556 SLIE 559
S IE
Sbjct: 549 SYIE 552
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 199/431 (46%), Gaps = 44/431 (10%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAA 66
P+ T + A K ++EG+ IHG + GF D+I+ + +L+ Y CG + A
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGF--YDDIYVQNSLVHFYGVCGESRNAC 161
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
VFG+M V SW +I + G EA + F +M V P+L T ++S
Sbjct: 162 KVFGEMPVRD--VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGR 216
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 185
+ L GK IHG +++ + AL+D+Y K + ++ A ++F L KD V +N M
Sbjct: 217 VGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSM 276
Query: 186 MTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++G + + EAI++F M S + P+ + +++SA + L + R +H Y+L
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
I I+ YAKCGY++ A +FN +RS+++ +W +++ G HGH E++ F
Sbjct: 337 IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFE 396
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ + + + VT ++ L A G + + R FH
Sbjct: 397 EMVKLGFKPNLVTFLAALNACCHTGLVDEGR-------RYFH------------------ 431
Query: 365 KLNMARY-LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
K+ Y LF + L + M+ G E L+L M +KPD +IL
Sbjct: 432 KMKSREYNLFPK-----LEHYGCMIDLLCRAGLLDEALELVKAMP---VKPDVRICGAIL 483
Query: 424 TACSHSGLVEE 434
+AC + G + E
Sbjct: 484 SACKNRGTLME 494
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/517 (31%), Positives = 271/517 (52%), Gaps = 37/517 (7%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
WN LIA+Y N E +++M+ + + PD T + + +C E + G+ +HG +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+ + C AL+ +Y +F ++ AR++F+R+ +DAV +N ++ Y + EA
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 201 VFHEM----IKMSV------------SPNVALFLNLIS-------------------AVS 225
+F +M +++SV + N L LIS A S
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 226 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 285
+ IRL + IHG + Y + N +I Y+KC L++A +VF + L +W S
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
+I+GY +EA L R + + +S+TL S+L +++ L KE HC R
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 346 HGKELS-VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 404
K+ + + NSL+ YAK GK+ A+ + M++R ++ +++ Y G L LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 405 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 464
M IKPD +T ++L+ACSHS LV EG ++F M EY I P H++C++DL R
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 465 AGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLI 524
AG L +A +++ +MP S A TLL+AC ++G+T+IG+ A+++L+++P N YVLI
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLI 591
Query: 525 SNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+N+ A G W ++A +R + +D +K PG + I+ D
Sbjct: 592 ANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 208/470 (44%), Gaps = 49/470 (10%)
Query: 86 IAAYLHNGQALEAFELFRQMIHRKVLPDLL--TLANAILSCAELDYLCHGKSIHGYMIRM 143
+A++ H A + F L R V DL+ + A+ + +C ++ G +H + I
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 144 GVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 202
GVE V LV YS F++ +A+ + E + +NV++ Y KN+L E I +
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 203 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 262
M+ + P+ + +++ A + D+ R +HG + Y + + + N +I Y +
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 263 GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR------------------ 304
+ AR +F+RM RD VSW ++I Y G EA LF
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIIS 252
Query: 305 --LLQREN---------------LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 347
LQ N +D V +I L+A S +G + KE+H L + +
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYD 312
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 407
+V N+LIT Y+KC L A +F+Q E L +WN+++ YA E L M
Sbjct: 313 GIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM 372
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIF-----RSMIREYTIVPGEVHYNCIIDLL 462
+ +P+ +T SIL C+ ++ G + R ++YT++ +N ++D+
Sbjct: 373 LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-----WNSLVDVY 427
Query: 463 SRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 512
+++G++ A V + S +L+ G+ + A+ K++ +
Sbjct: 428 AKSGKIVAAKQ-VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTR 476
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/511 (22%), Positives = 209/511 (40%), Gaps = 83/511 (16%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGY----AIRRGFGVCDEIFETTLLDMY 56
M + + P+ T S+L A + + GR +HG + + VC+ L+ MY
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN-----ALISMY 189
Query: 57 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV------ 110
+ + +A +F +M SWN +I Y G EAFELF +M V
Sbjct: 190 KRFRNMGIARRLFDRMFERDAV--SWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 111 --------------------------LP---DLLTLANAILSCAELDYLCHGKSIHGYMI 141
P D + + + +C+ + + GK IHG I
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+ L+ +YSK D+ A +F + +N +++GY + + EA +
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ-YITRVEIANQIIHTY 259
+ EM+ PN +++ + + +++ + H Y+LR + + + N ++ Y
Sbjct: 368 LLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
AK G + A+ V + M RD V++TS+I GY + G A+ LF+ + R ++ D VT++
Sbjct: 428 AKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVV 487
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
++L A S K VH G+ L + +C +
Sbjct: 488 AVLSACSH------SKLVH-------EGERLFMK-------MQC----------EYGIRP 517
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
CL ++ M+ Y G A+ + ++M KP T+ ++L AC G + G
Sbjct: 518 CLQHFSCMVDLYGRAGFLAKAKDIIHNMPY---KPSGATWATLLNACHIHGNTQIGKWAA 574
Query: 440 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
++ PG +Y I ++ + AG ++
Sbjct: 575 EKLLEMKPENPG--YYVLIANMYAAAGSWSK 603
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 270/511 (52%), Gaps = 3/511 (0%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
L++ Y CG V A VF + V W +++ Y+ NG ++ +L M
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVV--WAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 110 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKAR 168
+P+ T A+ + L K +HG +++ D L+ LY++ D++ A
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 169 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
K+F + D V ++ M+ + +N EA+++F M + V PN ++++ + +
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
L +HG V++ + + ++N +I YAKC + A +F + S++ VSW ++I
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
GY + G +A +FR R + + VT S L A + L + +VH L + + K
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
+++V+NSLI YAKCG + A+ +F +M + SWNA++ Y+ HG + L++ + MK
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
+ KP+ LTF +L+ CS++GL+++G + F SMIR++ I P HY C++ LL R+GQL
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQL 602
Query: 469 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 528
+A L++ +P S +LSA + E A++ILK+ P++ ++YVL+SN+
Sbjct: 603 DKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMY 662
Query: 529 AEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
A +W VA IR K+ +K PG S IE
Sbjct: 663 AGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 208/417 (49%), Gaps = 9/417 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T + L A+ LG+ + +HG ++ + V D LL +Y + G + A
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY-VLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M V W+ +IA + NG EA +LF +M V+P+ TL++ + CA
Sbjct: 304 VFNEM--PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 186
G+ +HG ++++G + D+ AL+D+Y+K + + A K+F L +K+ V +N ++
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI 421
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY +A ++F E ++ VS F + + A + L + L +HG ++
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNA 481
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+V ++N +I YAKCG +++A+ VFN M + D+ SW ++I+GY HG +A+ + ++
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SLITTYAKCG 364
+ + + + +T + +L S G + +E R HG E + + ++ + G
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRD-HGIEPCLEHYTCMVRLLGRSG 600
Query: 365 KLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
+L+ A L + + E + W AML A +M+ N E + L DE T+
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSA-SMNQNNEEFARRSAEEILKINPKDEATYV 656
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 145/315 (46%), Gaps = 8/315 (2%)
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIY 182
C + + K+IH +++ G D+ A L++ Y K K A +F+ + ++ V +
Sbjct: 59 CIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSF 118
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
+ GY D I ++ + + N +F + + L + +H +++
Sbjct: 119 VTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVK 174
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
Y + + +I+ Y+ CG + AR VF + +D+V W +++ YV +G+ ++++ L
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL 234
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 362
++ ++ T + L+A LG K VH + + + V L+ Y +
Sbjct: 235 LSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQ 294
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
G ++ A +F +M + + W+ M+ + +G E + LF M+ + P+E T +SI
Sbjct: 295 LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 423 LTACS---HSGLVEE 434
L C+ SGL E+
Sbjct: 355 LNGCAIGKCSGLGEQ 369
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 270/494 (54%), Gaps = 13/494 (2%)
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAE 126
VF ++ + T + WN LI Y + E + +M+ + PD T + C+
Sbjct: 65 VFERVPSPGTYL--WNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN 122
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 185
+ G S+HG ++R+G + D+V T+ VD Y K D+ ARK+F + ++AV + +
Sbjct: 123 NGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ Y+K+ EA ++F M + ++ AL L+ + D+ A+ + + +
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS----GDLVNAKKLFDEMPKRDI 238
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
I+ +I YAK G + AR +F R D+ +W+++I GY +G +EA +F
Sbjct: 239 ISYT----SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITTYAKCG 364
+ +N++ D ++ L+ A SQ+GC ++V L R V +LI AKCG
Sbjct: 295 MCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCG 354
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
++ A LF++M +R L S+ +M+ A+HG +E ++LF M I PDE+ FT IL
Sbjct: 355 HMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
C S LVEEGL+ F M ++Y+I+ HY+CI++LLSR G+L EAY L+KSMP +
Sbjct: 415 VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 485 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
+A +LL C L+G+TEI E +A+ + +LEP+++ SYVL+SNI A RW +VAH+R
Sbjct: 475 SAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKM 534
Query: 545 KDKELKSTPGYSLI 558
+ + G S I
Sbjct: 535 NENGITKICGRSWI 548
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 29/400 (7%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T ++ + G ++ G ++HG +R GF D + T+ +D Y KC + A
Sbjct: 108 PDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDK-DVVVGTSFVDFYGKCKDLFSARK 166
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VFG+M + SW L+ AY+ +G+ EA +F M R L L + ++ +
Sbjct: 167 VFGEMPERNAV--SWTALVVAYVKSGELEEAKSMFDLMPERN-LGSWNALVDGLVKSGD- 222
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMM 186
L + K + M + D+++ T+++D Y+K D+ AR +FE R D ++ ++
Sbjct: 223 --LVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALI 276
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
GY +N P EA VF EM +V P+ + + L+SA S + L + Y+ HQ +
Sbjct: 277 LGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL--HQRM 334
Query: 247 TRVE---IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF 303
+ + +I AKCG++ A +F M RDLVS+ SM+ G HG EAI LF
Sbjct: 335 NKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLF 394
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS------LI 357
+ E + D V +L+ Q S + E L Y K+ S+ S ++
Sbjct: 395 EKMVDEGIVPDEVAFTVILKVCGQ----SRLVE-EGLRYFELMRKKYSILASPDHYSCIV 449
Query: 358 TTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
++ GKL A L + M E ++W ++LG ++HGN
Sbjct: 450 NLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGN 489
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 189/398 (47%), Gaps = 17/398 (4%)
Query: 105 MIHRKVLPDLLTLANAILSC-AELDYLCHGKSIHGYMIRMGVEPD--MVACTALVDLYSK 161
MI R P LL+L C +E+ H IH +IR G+E D +++ S
Sbjct: 1 MIQRLSHPSLLSLETLFKLCKSEI----HLNQIHARIIRKGLEQDQNLISIFISSSSSSS 56
Query: 162 FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNL 220
++ + +FER+ + ++N ++ GY L E +++ M++ ++ P+ F +
Sbjct: 57 SSLSYSSSVFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLV 116
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
+ S+ +R+ S+HG VLR + V + + Y KC L AR VF M R+
Sbjct: 117 MKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNA 176
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
VSWT+++ YV G ++EA +F L+ NL + +L+ L + G L K++
Sbjct: 177 VSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKL--- 229
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
+ +++ S+I YAK G + AR LF++ + +W+A++ YA +G E
Sbjct: 230 -FDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
K+F+ M N+KPDE +++ACS G E ++ + + +ID
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
+ ++ G + A L + MP + C+++ ++G
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQ-RDLVSYCSMMEGMAIHG 385
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 289/559 (51%), Gaps = 7/559 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T SL+ A L + G +++ I+ G+ + + +T++L MY CG ++ A
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD-NVVVQTSVLGMYSSCGDLESARR 255
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F +N +WN +I L N + + FR M+ V P T + + C++L
Sbjct: 256 IFDCVNNRDAV--AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMM 186
GK IH +I D+ AL+D+Y S D+ +A +F R+ N + V +N ++
Sbjct: 314 GSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSII 373
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+G +N +A+ ++ +++MS P+ F ISA ++ + +HG V + Y
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGY 433
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
V + ++ Y K + A+ VF+ M+ RD+V WT MI G+ G+ + A+ F
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ RE R D +L S++ A S + L + HCL R +SV +L+ Y K GK
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
A +F + L WN+MLGAY+ HG + L F + PD +T+ S+L A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
CSH G +G ++ M +E I G HY+C+++L+S+AG + EA L++ P ++ A
Sbjct: 614 CSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQA 672
Query: 486 ALC-TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
L TLLSAC + +IG A+QILKL+P ++++++L+SN+ A GRW++VA +R
Sbjct: 673 ELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 545 KDKELKSTPGYSLIELDKQ 563
+ PG S IE++
Sbjct: 733 RGLASSKDPGLSWIEVNNN 751
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 186/392 (47%), Gaps = 16/392 (4%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEA-------FELF 102
L+ MY +C ++ A VF KM + + Y+ G +L + F++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 103 RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV---EPDMVACTALVDLY 159
M ++ ++ L C + L + IH ++ G A L+ +Y
Sbjct: 86 FFMPLNEIASSVVELTR---KCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 160 SKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN-DLPVEAINVFHEMIKMSVSPNVALF 217
+ + +ARK+F+++ +++ V YN + + Y +N D A + M V PN + F
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 218 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 277
+L+ + L D+ + S++ +++ Y V + ++ Y+ CG L+ AR +F+ + +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 278 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
RD V+W +MI G + + I++ ++ FR + + T +L S+LG S K +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 338 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 397
H + +L ++N+L+ Y CG + A Y+F ++ L SWN+++ + +G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 398 AEVLKLFNH-MKLGNIKPDELTFTSILTACSH 428
+ + ++ +++ +PDE TF++ ++A +
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 280/521 (53%), Gaps = 7/521 (1%)
Query: 47 IFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 106
I T L+ Y + G V+ A ++F +M V +W +I Y + A+E F +M+
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEM--PDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 107 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT- 165
+ P+ TL++ + SC + L +G +HG ++++G+E + A++++Y+ VT
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 166 -KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 224
A +F ++ K+ V + ++TG+ + + ++ +M+ + + A
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 225 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 284
+ + + + IH V++ + + + + N I+ Y +CGYL A+ F+ M +DL++W
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWN 283
Query: 285 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 344
++I+ + EA+++F+ + + + T SL+ A + + L+ +++H +R
Sbjct: 284 TLIS-ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR 342
Query: 345 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER-CLTSWNAMLGAYAMHGNYAEVLKL 403
K + + N+LI YAKCG + ++ +F ++ +R L SW +M+ Y HG AE ++L
Sbjct: 343 GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F+ M I+PD + F ++L+AC H+GLVE+GL+ F M EY I P YNC++DLL
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 464 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG-DTEIGEAIAKQILKLEPRNSSSYV 522
RAG++ EAY LV+ MP + +L AC+ + + I A+++++L+P+ +YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 523 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
++S I A G+W + A +R M + K G S I ++ Q
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 202/401 (50%), Gaps = 13/401 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKC 59
M Q PN TL S+L + + L G +HG ++ G+ ++ + +++MY C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK--LGMEGSLYVDNAMMNMYATC 159
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI--HRKVLPDLLTL 117
V M AA + +W LI + H G + ++++QM+ + +V P +T+
Sbjct: 160 -SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI 218
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 176
A+ + A +D + GK IH +I+ G + ++ +++DLY + +++A+ F + +
Sbjct: 219 --AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED 276
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
KD + +N +++ ++D EA+ +F PN F +L++A +++ + + +
Sbjct: 277 KDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL 335
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRDLVSWTSMITGYVHHGH 295
HG + R + VE+AN +I YAKCG + ++ VF + R+LVSWTSM+ GY HG+
Sbjct: 336 HGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGY 395
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNN 354
EA+ LF + +R D + +++L A G + +K + + + + N
Sbjct: 396 GAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 355 SLITTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMH 394
++ + GK+ A L ++M + ++W A+LGA H
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/482 (33%), Positives = 257/482 (53%), Gaps = 12/482 (2%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAELDYLCHGKSIHGYMI 141
N +I AYL Q ++F L+R + PD T SC+ + G +H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
R G DM T +VD+Y+KF + AR F+ + ++ V + +++GY++ A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
+F +M + +V ++ ++ D+ AR + + IT +IH Y
Sbjct: 166 LFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWT----TMIHGYC 218
Query: 261 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ-RENLRIDSVTLI 319
+ AR +F+ M R+LVSW +MI GY + E I LF+ +Q +L D VT++
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
S+L A+S G LS + HC R K++ V +++ Y+KCG++ A+ +F +M E+
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
+ SWNAM+ YA++GN L LF M + KPDE+T +++TAC+H GLVEEG + F
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWF 397
Query: 440 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 499
M RE + HY C++DLL RAG L EA +L+ +MP + L + LSAC Y D
Sbjct: 398 HVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKD 456
Query: 500 TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
E E I K+ ++LEP+N +YVL+ N+ A RWD+ ++ + + + K G SLIE
Sbjct: 457 IERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Query: 560 LD 561
++
Sbjct: 517 IN 518
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 195/443 (44%), Gaps = 57/443 (12%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT-LLDMYHKCGGVKMAA 66
P+ T +L + + + +G +H R FG C +++ +T ++DMY K G + A
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR--FGFCADMYVSTGVVDMYAKFGKMGCAR 133
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
F +M S SW LI+ Y+ G+ A +LF QM H K + + + + +
Sbjct: 134 NAFDEMPHRSEV--SWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGD 191
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 185
+ + + M V + T ++ Y D+ ARK+F+ + ++ V +N M
Sbjct: 192 ---MTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTM 244
Query: 186 MTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
+ GY +N P E I +F EM S+ P+ L+++ A+SD + L H +V R +
Sbjct: 245 IGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK 304
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+V++ I+ Y+KCG ++ A+ +F+ M + + SW +MI GY +G+ A+ LF
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ E + D +T+++++ A + HG G
Sbjct: 365 TMMIEE-KPDEITMLAVITACN-------------------HG----------------G 388
Query: 365 KLNMARYLFQQMTERCLTS----WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
+ R F M E L + + M+ G+ E L +M +P+ + +
Sbjct: 389 LVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF---EPNGIILS 445
Query: 421 SILTACSHSGLVEEGLQIFRSMI 443
S L+AC +E +I + +
Sbjct: 446 SFLSACGQYKDIERAERILKKAV 468
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 8/236 (3%)
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD--LVSWTSMITGYVHHGHID 297
+LRH T V+I + + A + YAR +F++ RD +S SMI Y+
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYP 59
Query: 298 EAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
++ L+R L++E D+ T +L ++ S C+ ++H +R ++ V+ +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
+ YAK GK+ AR F +M R SW A++ Y G KLF+ M ++K D
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP--HVK-DV 176
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIV-PGEVHYNCIIDLLSRAGQLTEA 471
+ + +++ SG + ++F M + I +H C I + A +L +A
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA 232
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGG 61
L P+ VT++S+L A + G+L G H + R+ VC T +LDMY KCG
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC-----TAILDMYSKCGE 324
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELF-RQMIHRKVLPDLLTLANA 120
++ A +F +M V SWN +I Y NG A A +LF MI K PD +T+
Sbjct: 325 IEKAKRIFDEM--PEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK--PDEITMLAV 380
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
I +C + G+ M MG+ + +VDL +
Sbjct: 381 ITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGR 421
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/483 (31%), Positives = 254/483 (52%), Gaps = 1/483 (0%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N LI +++N E +LF + + T + +C G +H ++
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 142 RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+ G D+ A T+L+ +YS + A K+F+ + ++ V + + +GY + EAI+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
+F +M++M V P+ + ++SA + D+ I Y+ + + +++ YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 261 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 320
KCG ++ AR VF+ M +D+V+W++MI GY + E I LF + +ENL+ D +++
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
L + + LG L + L R L + N+LI YAKCG + +F++M E+
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
+ NA + A +G+ +F + I PD TF +L C H+GL+++GL+ F
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 500
++ Y + HY C++DL RAG L +AY L+ MP ++ LLS CRL DT
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498
Query: 501 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
++ E + K+++ LEP N+ +YV +SNI + GGRWDE A +R M K +K PGYS IEL
Sbjct: 499 QLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIEL 558
Query: 561 DKQ 563
+ +
Sbjct: 559 EGK 561
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 165/329 (50%), Gaps = 9/329 (2%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
LY + T +L A + S + G +H ++ GF D T+LL +Y G + A
Sbjct: 107 LYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFN-HDVAAMTSLLSIYSGSGRLNDA 165
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F ++ S V +W L + Y +G+ EA +LF++M+ V PD + + +C
Sbjct: 166 HKLFDEIPDRS--VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
+ L G+ I YM M ++ + T LV+LY+K + KAR +F+ + KD V ++
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWST 283
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M+ GY N P E I +F +M++ ++ P+ + +S+ + L + L + RH+
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
++T + +AN +I YAKCG + VF M+ +D+V + I+G +GH+ + +F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSA 333
++ + D T + LL GC+ A
Sbjct: 404 QTEKLGISPDGSTFLGLL-----CGCVHA 427
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 165/348 (47%), Gaps = 2/348 (0%)
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYL 190
H K IH +I + D L+ F TK + +F + + +YN ++ G++
Sbjct: 28 HLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFV 87
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
N L E +++F + K + + F ++ A + +L +H V++ + V
Sbjct: 88 NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
++ Y+ G L A +F+ + R +V+WT++ +GY G EAI LF+ +
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
++ DS ++ +L A +G L + + + K V +L+ YAKCGK+ AR
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
+F M E+ + +W+ M+ YA + E ++LF M N+KPD+ + L++C+ G
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
++ G + S+I + + N +ID+ ++ G + + + K M
Sbjct: 328 ALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/560 (29%), Positives = 274/560 (48%), Gaps = 44/560 (7%)
Query: 45 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
D + L+ Y + + A VF ++ T S+N L+ AY +AF LF
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEI--TVRNAFSYNALLIAYTSREMYFDAFSLFLS 113
Query: 105 MIHRKVL------PDLLTLA---NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 155
I PD ++++ A+ C + + +HG++IR G + D+ +
Sbjct: 114 WIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGM 173
Query: 156 VDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPN 213
+ Y+K D + ARK+F+ + +D V +N M++GY ++ + ++ M+ S PN
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 214 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 273
+++ A D+ +H ++ + + + N +I YAKCG L YAR +F+
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 274 RMRSRDLVSWTSMITGYVHHGHIDEAIIL------------------------------- 302
M +D V++ ++I+GY+ HG + EA+ L
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAK 362
FR + R R ++VTL SLL +L+ L KE+H R + V S+I YAK
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 363 CGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
G L A+ +F +R L +W A++ AYA+HG+ LF+ M+ KPD++T T++
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
L+A +HSG + IF SM+ +Y I PG HY C++ +LSRAG+L++A + MP
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRA 542
+ LL+ + GD EI ++ ++EP N+ +Y +++N+ + GRW+E +R
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 543 MTKDKELKSTPGYSLIELDK 562
K LK PG S IE +K
Sbjct: 594 KMKRIGLKKIPGTSWIETEK 613
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 219/480 (45%), Gaps = 52/480 (10%)
Query: 8 PNRVTLVSLLHAAAK-----LGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
P+ +++ +L A + LGSL R +HG+ IR GF D ++ Y KC +
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIRGGFD-SDVFVGNGMITYYTKCDNI 183
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH-RKVLPDLLTLANAI 121
+ A VF +M + V SWN +I+ Y +G + ++++ M+ P+ +T+ +
Sbjct: 184 ESARKVFDEM--SERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 122 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAV 180
+C + L G +H MI ++ D+ C A++ Y+K + AR +F+ + KD+V
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 181 IY-------------------------------NVMMTGYLKNDLPVEAINVFHEMIKMS 209
Y N M++G ++N+ E IN F EMI+
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
PN +L+ +++ +++ + IH + +R+ + + II YAK G+L A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
VF+ + R L++WT++IT Y HG D A LF +Q + D VTL ++L A + G
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 330 CLSAVKEVH---CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWN 385
+ + Y G E +++ ++ GKL+ A +M + W
Sbjct: 482 DSDMAQHIFDSMLTKYDIEPGVEHYA--CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWG 539
Query: 386 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL-TFTSILTACSHSGLVEEGLQIFRSMIR 444
A+L ++ G+ E+ + F +L ++P+ +T + + +G EE + M R
Sbjct: 540 ALLNGASVLGDL-EIAR-FACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKR 597
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 15/324 (4%)
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYL 190
H +H ++ ++PD + L+ Y++ D +A +F+ + ++A YN ++ Y
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 191 KNDLPVEAINVFHEMIKMSV---------SPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
++ +A ++F I S S +++ L +S D LAR +HG+V+
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
R + + V + N +I Y KC ++ AR VF+ M RD+VSW SMI+GY G ++
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 302 LFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
+++ +L + + + VT+IS+ QA Q L EVH +LS+ N++I Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AKCG L+ AR LF +M+E+ ++ A++ Y HG E + LF+ M+ + T+
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWN 335
Query: 421 SILTACSHSGLVEEGLQIFRSMIR 444
++++ + EE + FR MIR
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIR 359
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Query: 162 FDVTKARKMFERLRNKDAV---IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 218
F++ +A + L NK AV Y ++ + ++ LP+ + + ++ S+ P+ L
Sbjct: 5 FEIQRA---LQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLAS 61
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
LIS + TR + Q +H VF+ + R
Sbjct: 62 KLIS----------------------FYTRQDRFRQALH-------------VFDEITVR 86
Query: 279 DLVSWTSMITGYVHHGHIDEAIILF------RLLQRENLRIDSVTLISLLQALSQLGCL- 331
+ S+ +++ Y +A LF + R DS+++ +L+ALS GC
Sbjct: 87 NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALS--GCDD 144
Query: 332 ----SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 387
S ++VH R ++ V N +IT Y KC + AR +F +M+ER + SWN+M
Sbjct: 145 FWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSM 204
Query: 388 LGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 446
+ Y+ G++ + K++ M + KP+ +T S+ AC S + GL++ + MI +
Sbjct: 205 ISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH 264
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
+ + N +I ++ G L A L M S
Sbjct: 265 IQMDLSL-CNAVIGFYAKCGSLDYARALFDEMSEKDS 300
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 261/482 (54%), Gaps = 43/482 (8%)
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERL 174
TL + + SC + H SIH +IR + D L+ + S D V A +F +
Sbjct: 31 TLISVLRSCKNI---AHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
N + +Y M+ G++ + + ++++H MI SV P+ + +++ A D+++ R
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCR 143
Query: 235 SIHGYVLRHQY-------ITRVEI------------------------ANQIIHTYAKCG 263
IH VL+ + + +EI A +I+ Y++CG
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 323
+++ A +F ++ +D V WT+MI G V + +++A+ LFR +Q EN+ + T + +L
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 324 ALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLNMARYLFQQMTERCL 381
A S LG L + VH ++ ELS V N+LI Y++CG +N AR +F+ M ++ +
Sbjct: 264 ACSDLGALELGRWVH--SFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 382 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 441
S+N M+ AMHG E + F M +P+++T ++L ACSH GL++ GL++F S
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 442 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 501
M R + + P HY CI+DLL R G+L EAY ++++P L TLLSAC+++G+ E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 502 IGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+GE IAK++ + E +S +YVL+SN+ A G+W E IR +D ++ PG S IE+D
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 562 KQ 563
Q
Sbjct: 502 NQ 503
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 211/467 (45%), Gaps = 45/467 (9%)
Query: 10 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVF 69
R TL+S+L + + + +IH IR F D L+ + V A VF
Sbjct: 29 RKTLISVLRSCKNIAHVP---SIHAKIIRT-FHDQDAFVVFELIRVCSTLDSVDYAYDVF 84
Query: 70 GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDY 129
+ ++ V + +I ++ +G++ + L+ +MIH VLPD + + + +C
Sbjct: 85 SYV--SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD---- 138
Query: 130 LCHGKSIHGYMIRMGV-------------------------------EPDMVACTALVDL 158
L + IH ++++G + D VA T +++
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 159 YSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 217
YS+ K A ++F+ ++ KD V + M+ G ++N +A+ +F EM +VS N
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 218 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS 277
+ ++SA SDL + L R +H +V + + N +I+ Y++CG + AR VF MR
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 278 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
+D++S+ +MI+G HG EAI FR + R + VTL++LL A S G L EV
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 338 HCLTYRAFHGK-ELSVNNSLITTYAKCGKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHG 395
R F+ + ++ ++ + G+L A R++ E +L A +HG
Sbjct: 379 FNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG 438
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
N K+ + + PD T+ + + SG +E +I SM
Sbjct: 439 NMELGEKIAKRL-FESENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + + N T V +L A + LG+L+ GR +H + + + + L++MY +CG
Sbjct: 246 MQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN-FVGNALINMYSRCG 304
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF M V S+N +I+ +G ++EA FR M++R P+ +TL
Sbjct: 305 DINEARRVFRVMR--DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL 362
Query: 121 ILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK 161
+ +C+ L G + M R+ VEP + +VDL +
Sbjct: 363 LNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGR 404
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 289/552 (52%), Gaps = 20/552 (3%)
Query: 17 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS 76
L K +L + + +H IRR D L+ C +A VF ++ +
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHE-DLHIAPKLISALSLCRQTNLAVRVFNQVQEPN 81
Query: 77 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI 136
+ N LI A+ N Q +AF +F +M + D T + +C+ +L K +
Sbjct: 82 VHLC--NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 137 HGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMTGYLKND 193
H ++ ++G+ D+ AL+D YS+ V A K+FE++ +D V +N M+ G +K
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAG 199
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI-HGYVLRHQYITRVEIA 252
+A +F EM + +LIS + L R + + L + R ++
Sbjct: 200 ELRDARRLFDEMPQR----------DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
Query: 253 -NQIIHTYAKCGYLQYARLVFNRMR--SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 309
+ ++ Y+K G ++ AR++F++M ++++V+WT +I GY G + EA L +
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 310 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 369
L+ D+ +IS+L A ++ G LS +H + R+ G V N+L+ YAKCG L A
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 370 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
+F + ++ L SWN ML +HG+ E ++LF+ M+ I+PD++TF ++L +C+H+
Sbjct: 370 FDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHA 429
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
GL++EG+ F SM + Y +VP HY C++DLL R G+L EA +V++MP +
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 490 LLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 549
LL ACR++ + +I + + ++KL+P + +Y L+SNI A W+ VA IR+ K +
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGV 549
Query: 550 KSTPGYSLIELD 561
+ G S +EL+
Sbjct: 550 EKPSGASSVELE 561
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 288/577 (49%), Gaps = 69/577 (11%)
Query: 51 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 110
T+L Y K G + F ++ + SW +I Y + GQ +A + M+ +
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSV--SWTTMIVGYKNIGQYHKAIRVMGDMVKEGI 142
Query: 111 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK--------- 161
P TL N + S A + GK +H +++++G+ ++ +L+++Y+K
Sbjct: 143 EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 162 -FDVTKARKM----------------------FERLRNKDAVIYNVMMTGYLKNDLPVEA 198
FD R + FE++ +D V +N M++G+ + + A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 199 INVFHEMIKMSV-SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
+++F +M++ S+ SP+ +++SA ++L + + + IH +++ + + N +I
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 258 TYAKCGYLQYARL---------------------------------VFNRMRSRDLVSWT 284
Y++CG ++ AR +F ++ RD+V+WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 285 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 344
+MI GY HG EAI LFR + R +S TL ++L S L LS K++H ++
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 345 FHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMHGNYAEVLKL 403
+SV+N+LIT YAK G + A F + ER SW +M+ A A HG+ E L+L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F M + ++PD +T+ + +AC+H+GLV +G Q F M I+P HY C++DL
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 464 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 523
RAG L EA ++ MP +LLSACR++ + ++G+ A+++L LEP NS +Y
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 524 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
++N+ + G+W+E A IR KD +K G+S IE+
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 206 IKMSVSPNVALFLNLISAVSDLRDIRL-ARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 264
+ +S+S + L NL+ + + R A+ +H V++ + V + N +++ Y+K GY
Sbjct: 5 VPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGY 64
Query: 265 LQYARLVFNRMR-------------------------------SRDLVSWTSMITGYVHH 293
+AR +F+ M RD VSWT+MI GY +
Sbjct: 65 ALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
G +AI + + +E + TL ++L +++ C+ K+VH + +SV+
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
NSL+ YAKCG MA+++F +M R ++SWNAM+ + G + F M +
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA----E 240
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
D +T+ S+++ + G L IF M+R+ + P
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 292/559 (52%), Gaps = 8/559 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T V LL A++ LG L+ G+ IH I RG + + + +T+L+D Y + KM A
Sbjct: 223 PNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPL-NVVLKTSLVDFYSQFS--KMEDA 278
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS-CAE 126
V ++ V W +++ ++ N +A EA F +M + P+ T + AILS C+
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYS-AILSLCSA 337
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK--ARKMFERLRNKDAVIYNV 184
+ L GK IH I++G E ALVD+Y K ++ A ++F + + + V +
Sbjct: 338 VRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT 397
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++ G + + + + EM+K V PNV ++ A S LR +R IH Y+LR
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+ + N ++ YA + YA V M+ RD +++TS++T + G + A+ +
Sbjct: 458 VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVIN 517
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ + +R+D ++L + A + LG L K +HC + ++ SV NSL+ Y+KCG
Sbjct: 518 YMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCG 577
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
L A+ +F+++ + SWN ++ A +G + L F M++ +PD +TF +L+
Sbjct: 578 SLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
ACS+ L + GL+ F+ M + Y I P HY ++ +L RAG+L EA +V++M ++
Sbjct: 638 ACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNA 697
Query: 485 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMT 544
TLL ACR G+ +GE +A + L L P + + Y+L++++ E G+ + R +
Sbjct: 698 MIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLM 757
Query: 545 KDKELKSTPGYSLIELDKQ 563
+K L G S +E+ +
Sbjct: 758 TEKRLSKKLGKSTVEVQGK 776
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 265/572 (46%), Gaps = 43/572 (7%)
Query: 7 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 66
+PN T S++ + A L + G +HG I+ GF + + ++L D+Y KCG K A
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE-GNSVVGSSLSDLYSKCGQFKEAC 179
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+F + T SW +I++ + + EA + + +M+ V P+ T +L +
Sbjct: 180 ELFSSLQNADTI--SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK-LLGASS 236
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 185
L GK+IH +I G+ ++V T+LVD YS+F + A ++ +D ++ +
Sbjct: 237 FLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSV 296
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
++G+++N EA+ F EM + + PN + ++S S +R + + IH ++ +
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF 356
Query: 246 ITRVEIANQIIHTYAKCGYLQY-ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
++ N ++ Y KC + A VF M S ++VSWT++I G V HG + + L
Sbjct: 357 EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLM 416
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ + + + VTL +L+A S+L + V E+H R E+ V NSL+ YA
Sbjct: 417 EMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSR 476
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
K++ A + + M R ++ +++ + G + L + N+M I+ D+L+ ++
Sbjct: 477 KVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFIS 536
Query: 425 ACSHSGLVEEG---------------LQIFRSMIREYT---------------IVPGEVH 454
A ++ G +E G + S++ Y+ P V
Sbjct: 537 ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVS 596
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSM---PSTHSSAALCTLLSACRLYGDTEIG---EAIAK 508
+N ++ L+ G ++ A + + M + S LLSAC T++G + K
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 509 QILKLEPRNSSSYVLISNILAEGGRWDEVAHI 540
+I +EP+ YV + IL GR +E +
Sbjct: 657 KIYNIEPQ-VEHYVHLVGILGRAGRLEEATGV 687
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 223/454 (49%), Gaps = 11/454 (2%)
Query: 29 GRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIA 87
G IH I+ FG+ + + LL +Y K G+ A +F +M + TV +W +I+
Sbjct: 42 GLHIHCPVIK--FGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM--SHRTVFAWTVMIS 97
Query: 88 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEP 147
A+ + + A LF +M+ P+ T ++ + SCA L + +G +HG +I+ G E
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 148 DMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 206
+ V ++L DLYSK K A ++F L+N D + + +M++ + EA+ + EM+
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 207 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 266
K V PN F+ L+ A S L + ++IH ++ V + ++ Y++ ++
Sbjct: 218 KAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
A V N +D+ WTS+++G+V + EA+ F ++ L+ ++ T ++L S
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM-ARYLFQQMTERCLTSWN 385
+ L K++H T + V N+L+ Y KC + A +F M + SW
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 386 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
++ HG + L M ++P+ +T + +L ACS V L+I ++R
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRR 456
Query: 446 YTIVPGE-VHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ V GE V N ++D + + ++ A+N+++SM
Sbjct: 457 H--VDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 168/329 (51%), Gaps = 5/329 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ L PN T ++L + + SL G+ IH I+ GF ++ L+DMY KC
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV-GNALVDMYMKCS 374
Query: 61 GVKMAAA-VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
++ A+ VFG M S V SW LI + +G + F L +M+ R+V P+++TL+
Sbjct: 375 ASEVEASRVFGAM--VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKD 178
+ +C++L ++ IH Y++R V+ +MV +LVD Y S V A + ++ +D
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ Y ++T + + A++V + M + + ISA ++L + + +H
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
Y ++ + + N ++ Y+KCG L+ A+ VF + + D+VSW +++G +G I
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQ 327
A+ F ++ + DSVT + LL A S
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSN 641
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 162/337 (48%), Gaps = 12/337 (3%)
Query: 117 LANAILSCAELDYLCHGKS------IHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARK 169
L N SC + C S IH +I+ G+ ++ C L+ LY K D + ARK
Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARK 79
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
+F+ + ++ + VM++ + K+ A+++F EM+ PN F +++ + + LRD
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
I +HG V++ + + + + Y+KCG + A +F+ +++ D +SWT MI+
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
V EA+ + + + + + T + LL A S LG L K +H + G
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH--SNIIVRGIP 256
Query: 350 LSV--NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 407
L+V SL+ Y++ K+ A + E+ + W +++ + + E + F M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
+ ++P+ T+++IL+ CS ++ G QI I+
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK 353
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + PN VTL +L A +KL ++ IH Y +RR + + +L+D Y
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD-GEMVVGNSLVDAYASSR 476
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A V M ++ L+ + G+ A + M + D L+L
Sbjct: 477 KVDYAWNVIRSMKRRDNI--TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGF 534
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
I + A L L GK +H Y ++ G +LVD+YSK + A+K+FE + D
Sbjct: 535 ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
V +N +++G N A++ F EM P+ FL L+SA S+ R
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 249/484 (51%), Gaps = 42/484 (8%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
+N L+ Y + + + +F +M+ + V PD + A I + L G +H
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 141 IRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAI 199
++ G+E + T L+ +Y V ARK+F+ + + V +N ++T + +
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN------ 186
Query: 200 NVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 259
D+ AR I +L + + N ++ Y
Sbjct: 187 -----------------------------DVAGAREIFDKMLVRNHTS----WNVMLAGY 213
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
K G L+ A+ +F+ M RD VSW++MI G H+G +E+ + FR LQR + + V+L
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE- 378
+L A SQ G K +H +A + +SVNN+LI Y++CG + MAR +F+ M E
Sbjct: 274 GVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK 333
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
RC+ SW +M+ AMHG E ++LFN M + PD ++F S+L ACSH+GL+EEG
Sbjct: 334 RCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDY 393
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
F M R Y I P HY C++DL R+G+L +AY+ + MP ++ TLL AC +G
Sbjct: 394 FSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Query: 499 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
+ E+ E + +++ +L+P NS VL+SN A G+W +VA IR + +K T +SL+
Sbjct: 454 NIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513
Query: 559 ELDK 562
E+ K
Sbjct: 514 EVGK 517
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+Q + PN V+L +L A ++ GS + G+ +HG+ + G+ + L+DMY +CG
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV-NNALIDMYSRCG 318
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V MA VF M V SW +IA +GQ EA LF +M V PD ++ +
Sbjct: 319 NVPMARLVFEGMQEKRCIV-SWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 121 ILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK 161
+ +C+ + G+ M R+ +EP++ +VDLY +
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGR 419
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 136/301 (45%), Gaps = 11/301 (3%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
D+ PN V +++ A + + R I + R + +L Y K G +
Sbjct: 165 DEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVR-----NHTSWNVMLAGYIKAGEL 219
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
+ A +F +M SW+ +I HNG E+F FR++ + P+ ++L +
Sbjct: 220 ESAKRIFSEMPHRDDV--SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLS 277
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI 181
+C++ GK +HG++ + G + AL+D+YS+ +V AR +FE ++ K ++
Sbjct: 278 ACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 337
Query: 182 -YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+ M+ G + EA+ +F+EM V+P+ F++L+ A S I +
Sbjct: 338 SWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEM 397
Query: 241 LRHQYI-TRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDE 298
R +I +E ++ Y + G LQ A +M + W +++ HG+I+
Sbjct: 398 KRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIEL 457
Query: 299 A 299
A
Sbjct: 458 A 458
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 280/548 (51%), Gaps = 16/548 (2%)
Query: 25 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG---GVKMAAAVFGKMNATSTTVGS 81
SL E +HG I+ + + I + L+D C + A +VF ++ S +
Sbjct: 18 SLVELNQLHGLMIKSSV-IRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYI-- 74
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
WN +I Y ++ +A +++M+ + PD T + +C+ L + G +HG+++
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 142 RMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+ G E +M T L+ +Y +V ++FE + + V + +++G++ N+ +AI
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV--------LRHQYITRVEIA 252
F EM V N + ++L+ A +DI + HG++ + + V +A
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
+I YAKCG L+ AR +F+ M R LVSW S+ITGY +G +EA+ +F + +
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
D VT +S+++A GC + +H + K+ ++ +L+ YAK G A+
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHSGL 431
F+ + ++ +W ++ A HG+ E L +F M+ GN PD +T+ +L ACSH GL
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 491
VEEG + F M + + P HY C++D+LSRAG+ EA LVK+MP + LL
Sbjct: 435 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 494
Query: 492 SACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 551
+ C ++ + E+ + I + + E S YVL+SNI A+ GRW +V IR K K +
Sbjct: 495 NGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 554
Query: 552 TPGYSLIE 559
G+S +E
Sbjct: 555 VLGHSSVE 562
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 216/423 (51%), Gaps = 21/423 (4%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T +L A + L +Q G +HG+ ++ GF V + T LL MY CG V
Sbjct: 105 PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV-NMYVSTCLLHMYMCCGEVNYGLR 163
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + V +W LI+ +++N + +A E FR+M V + + + +++C
Sbjct: 164 VFEDI--PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRC 221
Query: 128 DYLCHGKSIHGYMIRMGVEP--------DMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
+ GK HG++ +G +P +++ T+L+D+Y+K D+ AR +F+ + +
Sbjct: 222 KDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT 281
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V +N ++TGY +N EA+ +F +M+ + ++P+ FL++I A +L +SIH
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA 341
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
YV + ++ I +++ YAK G + A+ F + +D ++WT +I G HGH +E
Sbjct: 342 YVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNE 401
Query: 299 AIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--S 355
A+ +F R+ ++ N D +T + +L A S +G L + + R HG E +V +
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIG-LVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 356 LITTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
++ ++ G+ A L + M + + W A+L +H N L+L + ++ +P
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHEN----LELTDRIRSMVAEP 516
Query: 415 DEL 417
+EL
Sbjct: 517 EEL 519
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 146/319 (45%), Gaps = 35/319 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGV-------CDEIFETTLL 53
MQ + N +V LL A + + G+ HG+ GF + I T+L+
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 54 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD 113
DMY KCG ++ A +F M T+ SWN +I Y NG A EA +F M+ + PD
Sbjct: 259 DMYAKCGDLRTARYLFDGM--PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPD 316
Query: 114 LLTL-----ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKA 167
+T A+ I C++L G+SIH Y+ + G D ALV++Y+K D A
Sbjct: 317 KVTFLSVIRASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 168 RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSD 226
+K FE L KD + + V++ G + EA+++F M K + +P+ +L ++ A S
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSH 431
Query: 227 L-------RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 279
+ R R +HG VE ++ ++ G + A + M +
Sbjct: 432 IGLVEEGQRYFAEMRDLHGLE------PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 280 LVS-WTSMITGYVHHGHID 297
V+ W +++ G H +++
Sbjct: 486 NVNIWGALLNGCDIHENLE 504
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 15/243 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D + P++VT +S++ A+ G Q G++IH Y + GF V D L++MY K G
Sbjct: 308 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF-VKDAAIVCALVNMYAKTG 366
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLAN 119
+ A F + T +W +I +G EA +F++M + PD +T
Sbjct: 367 DAESAKKAFEDLEKKDTI--AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 120 AILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 178
+ +C+ + + G+ M + G+EP + +VD+ S+ + ERL
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSR---AGRFEEAERLVKTM 481
Query: 179 AVIYNVMMTGYLKNDLPV-EAINVFHEMIKMSVSPN------VALFLNLISAVSDLRDIR 231
V NV + G L N + E + + + M P L N+ + D++
Sbjct: 482 PVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVK 541
Query: 232 LAR 234
L R
Sbjct: 542 LIR 544
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 268/518 (51%), Gaps = 41/518 (7%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N ++ + + LF ++ + + PD TL + S L + G+ +HGY +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 142 RMGVEPDMVACTALVDLYS---KFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
+ G+E D +L+ +Y+ K ++T K+F+ + +D V +N +++ Y+ N +A
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEIT--HKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 199 INVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
I VF M + S + + ++ +SA S L+++ + I+ +V+ ++ V I N ++
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVD 190
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-------------- 303
+ KCG L AR VF+ MR +++ WTSM+ GYV G IDEA +LF
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 304 -----------------RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 346
R +Q +R D+ L+SLL +Q G L K +H
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
+ V +L+ YAKCG + A +F ++ ER SW +++ AM+G L L+
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYE 370
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M+ ++ D +TF ++LTAC+H G V EG +IF SM + + P H +C+IDLL RAG
Sbjct: 371 MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAG 430
Query: 467 QLTEAYNLVKSMPSTHSSAAL---CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 523
L EA L+ M + C+LLSA R YG+ +I E +A+++ K+E +SS++ L
Sbjct: 431 LLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 524 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
++++ A RW++V ++R KD ++ PG S IE+D
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEID 528
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 210/434 (48%), Gaps = 42/434 (9%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
++ Q LYP+ TL +L + +L + EG +HGYA++ G D +L+ MY G
Sbjct: 37 LRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEF-DSYVSNSLMGMYASLG 95
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLAN 119
+++ VF +M V SWN LI++Y+ NG+ +A +F++M L D T+ +
Sbjct: 96 KIEITHKVFDEM--PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVS 153
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD------ 163
+ +C+ L L G+ I+ +++ E + ALVD++ K FD
Sbjct: 154 TLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKN 212
Query: 164 ----------------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 207
+ +AR +FER KD V++ MM GY++ + EA+ +F M
Sbjct: 213 VKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 208 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 267
+ P+ + ++L++ + + + IHGY+ ++ + ++ YAKCG ++
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
A VF ++ RD SWTS+I G +G A+ L+ ++ +R+D++T +++L A +
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNH 392
Query: 328 LGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM----TERCLT 382
G ++ +++ H +T R + + LI + G L+ A L +M E +
Sbjct: 393 GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP 452
Query: 383 SWNAMLGAYAMHGN 396
+ ++L A +GN
Sbjct: 453 VYCSLLSAARNYGN 466
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 34/330 (10%)
Query: 174 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
L+ ++YN M+ + + +F E+ + P+ ++ ++ LR +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
+HGY ++ ++N ++ YA G ++ VF+ M RD+VSW +I+ YV +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 294 GHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
G ++AI +F R+ Q NL+ D T++S L A S L L + ++ F + +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFE-MSVRI 184
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTE---RCLTS-------------------------- 383
N+L+ + KCG L+ AR +F M + +C TS
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 384 --WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 441
W AM+ Y + E L+LF M+ I+PD S+LT C+ +G +E+G I
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI-HG 303
Query: 442 MIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
I E + +V ++D+ ++ G + A
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETA 333
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
+++ L+ + M+ + + LF L+ + L D+ TL +L+++ +L +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
++VH +A + V+NSL+ YA GK+ + +F +M +R + SWN ++ +Y +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 395 GNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY--TIVPG 451
G + + + +F M + N+K DE T S L+ACS +E G +I+R ++ E+ ++ G
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 452 EVHYNCIIDLLSRAGQLTEAYNLVKSM 478
N ++D+ + G L +A + SM
Sbjct: 186 ----NALVDMFCKCGCLDKARAVFDSM 208
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 291/537 (54%), Gaps = 44/537 (8%)
Query: 64 MAAAVFGKMNATSTTVGS------WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
A VF + + S + G WN +I ++ H +A L M+ V D +L
Sbjct: 65 FARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSL 124
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 176
+ + +C+ L ++ G IHG++ + G+ D+ L+ LY K + +R+MF+R+
Sbjct: 125 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 184
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD------- 229
+D+V YN M+ GY+K L V A +F +++ M + N+ + ++IS + D
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELF-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASK 242
Query: 230 ----------IRLARSIHGYVLRHQYI----------TRVEIAN--QIIHTYAKCGYLQY 267
I I GYV +H I R ++ +I YAK G++ +
Sbjct: 243 LFADMPEKDLISWNSMIDGYV-KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHH 301
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALS 326
A+ +F++M RD+V++ SM+ GYV + + EA+ +F +++E+ L D TL+ +L A++
Sbjct: 302 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 361
Query: 327 QLGCLSAVKEVHC-LTYRAFH-GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSW 384
QLG LS ++H + + F+ G +L V +LI Y+KCG + A +F+ + + + W
Sbjct: 362 QLGRLSKAIDMHLYIVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGIENKSIDHW 419
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
NAM+G A+HG + ++ ++KPD++TF +L ACSHSGLV+EGL F M R
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 479
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 504
++ I P HY C++D+LSR+G + A NL++ MP + T L+AC + + E GE
Sbjct: 480 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 539
Query: 505 AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+AK ++ N SSYVL+SN+ A G W +V +R M K+++++ PG S IELD
Sbjct: 540 LVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 216/477 (45%), Gaps = 78/477 (16%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
++ +L +L A ++LG ++ G IHG+ + G D + L+ +Y KCG + ++ +
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLW-SDLFLQNCLIGLYLKCGCLGLSRQM 178
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVL-------------PDL 114
F +M + S+N +I Y+ G + A ELF M + K L D
Sbjct: 179 FDRMPKRDSV--SYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDG 236
Query: 115 LTLANAILS-CAELDYLCHGKSIHGYMIRMGVEP-----------DMVACTALVDLYSKF 162
+ +A+ + + E D + I GY+ +E D+V ++D Y+K
Sbjct: 237 VDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKL 296
Query: 163 D-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNL 220
V A+ +F+++ ++D V YN MM GY++N +EA+ +F +M K S + P+ + +
Sbjct: 297 GFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
+ A++ L + A +H Y++ Q+ ++ +I Y+KCG +Q+A LVF + ++ +
Sbjct: 357 LPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSI 416
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG-------CLSA 333
W +MI G HG + A + ++R +L+ D +T + +L A S G C
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 476
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
++ H + R H ++ ++ G + +A+ L ++M
Sbjct: 477 MRRKHKIEPRLQH------YGCMVDILSRSGSIELAKNLIEEMP---------------- 514
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
++P+++ + + LTACSH E G + + +I + P
Sbjct: 515 ------------------VEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNP 553
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 8/240 (3%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
++ L P+ TLV +L A A+LG L + +H Y + + F + ++ L+DMY KCG
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKL-GVALIDMYSKCGS 400
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
++ A VF + S + WN +I +G AF++ Q+ + PD +T +
Sbjct: 401 IQHAMLVFEGIENKS--IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 122 LSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKF-DVTKARKMFERLR-NKD 178
+C+ + G M R +EP + +VD+ S+ + A+ + E + +
Sbjct: 459 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPN 518
Query: 179 AVIYNVMMTGYLKN-DLPVEAINVFHEMIKMSVSPNVALFL-NLISAVSDLRDIRLARSI 236
VI+ +T + + + H +++ +P+ + L N+ ++ +D+R R++
Sbjct: 519 DVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTM 578
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/577 (30%), Positives = 289/577 (50%), Gaps = 31/577 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE-IFETTLLDMYHKC 59
+Q Q+ Y +L A A+ +L +G +H + + + I L++MY KC
Sbjct: 56 LQSQQAY------AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKC 109
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A VF M V SW LI Y+ G E F LF M+ P+ TL++
Sbjct: 110 GNILYARQVFDTM--PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSS 166
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD----VTKARKMFERLR 175
+ SC GK +HG +++G+ + A++ +Y + +A +FE ++
Sbjct: 167 VLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK 222
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV---SDLRDIRL 232
K+ V +N M+ + +L +AI VF M V + A LN+ S++ SDL +
Sbjct: 223 FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 233 AR---SIHGYVLRHQYITRVEIANQIIHTYAKC--GYLQYARLVFNRMRSRDLVSWTSMI 287
++ +H ++ +T+ E+A +I Y++ Y +L RD+V+W +I
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGII 342
Query: 288 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 347
T + + + AI LF L++E L D T S+L+A + L +H +
Sbjct: 343 TAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFL 401
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 407
+ +NNSLI YAKCG L++ +F M R + SWN+ML AY++HG +L +F M
Sbjct: 402 ADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 467
+I PD TF ++L+ACSH+G VEEGL+IFRSM + +P HY C+ID+LSRA +
Sbjct: 462 ---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAER 518
Query: 468 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL-EPRNSSSYVLISN 526
EA ++K MP + LL +CR +G+T +G+ A ++ +L EP NS SY+ +SN
Sbjct: 519 FAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSN 578
Query: 527 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
I G ++E + ++ P S E+ +
Sbjct: 579 IYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNK 615
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 247/461 (53%), Gaps = 33/461 (7%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
K I+ +I G+ T +VD K D+ A ++F ++ N + +YN ++ Y N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 193 DLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGY------------ 239
L + I ++ ++++ S P+ F + + + L L + +HG+
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 240 -------------------VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
V Y V N ++ YA+ G ++ A+ +F+ M + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
VSWT+MI+GY G EA+ FR +Q + D ++LIS+L + +QLG L K +H
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
R K+ V N+LI Y+KCG ++ A LF QM + + SW+ M+ YA HGN
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
++ FN M+ +KP+ +TF +L+ACSH G+ +EGL+ F M ++Y I P HY C+ID
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
+L+RAG+L A + K+MP S +LLS+CR G+ ++ +++LEP + +
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 521 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
YVL++NI A+ G+W++V+ +R M +++ +K TPG SLIE++
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 217/481 (45%), Gaps = 57/481 (11%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
T ++D K + A +F ++ ++ V +N +I AY HN + +++Q++ +
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQV--SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKS 103
Query: 110 V-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKA 167
LPD T SCA L GK +HG++ + G +V AL+D+Y KF D+ A
Sbjct: 104 FELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDA 163
Query: 168 RKMFERLRNKDAVIYN-------------------------------VMMTGYLKNDLPV 196
K+F+ + +D + +N M++GY V
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV 223
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
EA++ F EM + P+ ++++ + + L + L + IH Y R ++ + + N +I
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
Y+KCG + A +F +M +D++SW++MI+GY +HG+ AI F +QR ++ + +
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 317 TLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKLNMARYLFQQ 375
T + LL A S +G + + + ++ LI A+ GKL A + +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 376 MTERCLTS-WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE- 433
M + + W ++L + GN L +H L ++P+++ +L A ++ L +
Sbjct: 404 MPMKPDSKIWGSLLSSCRTPGNLDVALVAMDH--LVELEPEDMG-NYVLLANIYADLGKW 460
Query: 434 EGLQIFRSMIREYTI--VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 491
E + R MIR + PG G L E N+V+ S +S T +
Sbjct: 461 EDVSRLRKMIRNENMKKTPG--------------GSLIEVNNIVQEFVSGDNSKPFWTEI 506
Query: 492 S 492
S
Sbjct: 507 S 507
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 47/333 (14%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG------------------------FGV 43
P+R T + + A LGS G+ +HG+ + G V
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 44 CDEIFE------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALE 97
DE++E +LL Y + G +K A +F M T+ SW +I+ Y G +E
Sbjct: 167 FDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLM--LDKTIVSWTAMISGYTGIGCYVE 224
Query: 98 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 157
A + FR+M + PD ++L + + SCA+L L GK IH Y R G C AL++
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIE 284
Query: 158 LYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
+YSK V ++A ++F ++ KD + ++ M++GY + AI F+EM + V PN
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 217 FLNLISAVS-------DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
FL L+SA S LR + R +Q ++E +I A+ G L+ A
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQ------DYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 270 LVFNRMRSR-DLVSWTSMITGYVHHGHIDEAII 301
+ M + D W S+++ G++D A++
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRTPGNLDVALV 431
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 12/166 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF----GVCDEIFETTLLDMY 56
MQ + P+ ++L+S+L + A+LGSL+ G+ IH YA RRGF GVC+ L++MY
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCN-----ALIEMY 286
Query: 57 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 116
KCG + A +FG+M V SW+ +I+ Y ++G A A E F +M KV P+ +T
Sbjct: 287 SKCGVISQAIQLFGQMEGKD--VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 117 LANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
+ +C+ + G M + +EP + L+D+ ++
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLAR 390
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 259/488 (53%), Gaps = 11/488 (2%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
N LI + G+ +A + Q + P T IL C L +H +++
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 143 MGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
G + D T L+ +YS V ARK+F++ R + ++N + E + +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 202 FHEMIKMSVSPNVALFLNLISAV----SDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
+ +M ++ V + + ++ A + + + IH ++ R Y + V I ++
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE--NLRIDS 315
YA+ G + YA VF M R++VSW++MI Y +G EA+ FR + RE + +S
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 316 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 375
VT++S+LQA + L L K +H R L V ++L+T Y +CGKL + + +F +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 376 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEG 435
M +R + SWN+++ +Y +HG + +++F M P +TF S+L ACSH GLVEEG
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 436 LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACR 495
++F +M R++ I P HY C++DLL RA +L EA +V+ M + +LL +CR
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 496 LYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 555
++G+ E+ E ++++ LEP+N+ +YVL+++I AE WDEV ++ + + + L+ PG
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 556 SLIELDKQ 563
+E+ ++
Sbjct: 526 CWMEVRRK 533
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 145/279 (51%), Gaps = 8/279 (2%)
Query: 26 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 85
L +G+ IH + RRG+ I TTL+DMY + G V A+ VFG M + V SW+ +
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIM-TTLVDMYARFGCVDYASYVFGGMPVRN--VVSWSAM 254
Query: 86 IAAYLHNGQALEAFELFRQMIH--RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 143
IA Y NG+A EA FR+M+ + P+ +T+ + + +CA L L GK IHGY++R
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 144 GVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 202
G++ + +ALV +Y + + +++F+R+ ++D V +N +++ Y + +AI +F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 203 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR-HQYITRVEIANQIIHTYAK 261
EM+ SP F++++ A S + + + + R H ++E ++ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 262 CGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHIDEA 299
L A + MR+ W S++ HG+++ A
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE--TTLLDMYHKCGGVKMA 65
PN VT+VS+L A A L +L++G+ IHGY +RRG D I + L+ MY +CG +++
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGL---DSILPVISALVTMYGRCGKLEVG 339
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
VF +M+ V SWN LI++Y +G +A ++F +M+ P +T + + +C+
Sbjct: 340 QRVFDRMH--DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 126 ELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+ GK + M R G++P + +VDL + + + +A KM + +R +
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 290/553 (52%), Gaps = 19/553 (3%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM--- 72
L A +L SL GR +H +R G + + +L MY +C ++ A +F +M
Sbjct: 89 LFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL 147
Query: 73 NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD---LLTLANAILSCAELDY 129
NA S T +I+AY G +A LF M+ P TL ++++ LD+
Sbjct: 148 NAVSRTT-----MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDF 202
Query: 130 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTG 188
G+ IH ++IR G+ + T +V++Y K + A+++F+++ K V +M G
Sbjct: 203 ---GRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
Y + +A+ +F +++ V + +F ++ A + L ++ L + IH V + +
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
V + ++ Y KC + A F +R + VSW+++I+GY +EA+ F+ L+
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 309 ENLRI-DSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITTYAKCGKL 366
+N I +S T S+ QA S L + +VH R+ G + ++LIT Y+KCG L
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG-ESALITMYSKCGCL 438
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
+ A +F+ M + +W A + +A +GN +E L+LF M +KP+ +TF ++LTAC
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
SH+GLVE+G +M+R+Y + P HY+C+ID+ +R+G L EA +K+MP + +
Sbjct: 499 SHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMS 558
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
LS C + + E+GE +++ +L+P +++ YVL N+ G+W+E A + + +
Sbjct: 559 WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNE 618
Query: 547 KELKSTPGYSLIE 559
+ LK S I+
Sbjct: 619 RMLKKELSCSWIQ 631
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N T S+ A + L G +H AI+R + + E+ L+ MY KCG + A V
Sbjct: 386 NSFTYTSIFQACSVLADCNIGGQVHADAIKRSL-IGSQYGESALITMYSKCGCLDDANEV 444
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F M+ + + +W I+ + + G A EA LF +M+ + P+ +T + +C+
Sbjct: 445 FESMD--NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 502
Query: 129 YLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAVIYNVM 185
+ GK M+R V P + ++D+Y++ + +A K + + DA+ +
Sbjct: 503 LVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCF 562
Query: 186 MTG 188
++G
Sbjct: 563 LSG 565
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
H ++EA + + + + + S + L +A +L LS + +H + +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
N ++ Y +C L A LF +M+E S M+ AYA G + + LF+ M
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
KP +T++L + + ++ G QI +IR + I+++ + G L A
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG-IVNMYVKCGWLVGAK 239
Query: 473 NLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 532
+ M A CT L + G T+ G A+ LK L +++ EG
Sbjct: 240 RVFDQMAVKKPVA--CTGL----MVGYTQAGR--ARDALK----------LFVDLVTEGV 281
Query: 533 RWD 535
WD
Sbjct: 282 EWD 284
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/520 (30%), Positives = 275/520 (52%), Gaps = 12/520 (2%)
Query: 45 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ-ALEAFELFR 103
D + + + MY + G + A VF +M+ SWN L++ G EA +FR
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMI--SWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 163
M+ V D ++ + I +C L + IHG I+ G E + L+ YSK
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 164 VTKARK-MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
V +A K +F ++ ++ V + M++ K+D A+++F M V PN F+ LI+
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMISSN-KDD----AVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
AV I+ IHG ++ +++ + N I YAK L+ A+ F + R+++S
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
W +MI+G+ +G EA+ +F E + + T S+L A++ +S + C +
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 343 RAFHGKELS--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
G V+++L+ YAK G ++ + +F +M+++ W +++ AY+ HG++ V
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
+ LF+ M N+ PD +TF S+LTAC+ G+V++G +IF MI Y + P HY+C++D
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
+L RAG+L EA L+ +P + L ++L +CRL+G+ ++G +A+ ++++P S S
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 521 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
YV + NI AE WD+ A IR + K + G+S I++
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 159/601 (26%), Positives = 272/601 (45%), Gaps = 80/601 (13%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFG--VCDEIFETTLLDMYHKCGGVKMAA 66
+ VTL L A G L+ G IHG++ GF VC ++ MY K G A
Sbjct: 77 DEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVC---VSNAVMGMYRKAGRFDNAL 131
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+F N V SWN +++ + N AL +M V+ D T + A+ C
Sbjct: 132 CIF--ENLVDPDVVSWNTILSGFDDNQIALN---FVVRMKSAGVVFDAFTYSTALSFCVG 186
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 185
+ G + +++ G+E D+V + + +YS+ + AR++F+ + KD + +N +
Sbjct: 187 SEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSL 246
Query: 186 MTGYLKND-LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++G + EA+ +F +M++ V + F ++I+ D++LAR IHG ++
Sbjct: 247 LSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG 306
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
Y + +E+ N ++ Y+KCG L+ + VF++M R++VSWT+MI+ + D+A+ +F
Sbjct: 307 YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFL 361
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKE---VHCLTYRAFHGKELSVNNSLITTYA 361
++ + + + VT + L+ A+ C +KE +H L + E SV NS IT YA
Sbjct: 362 NMRFDGVYPNEVTFVGLINAVK---CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYA 418
Query: 362 KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
K L A+ F+ +T R + SWNAM+ +A +G E LK+F P+E TF S
Sbjct: 419 KFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGS 477
Query: 422 ILTACSHS-------------------------------------GLVEEGLQIFRSMIR 444
+L A + + G ++E ++F M +
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLS---ACRLYGDTE 501
+ V + II S G NL M + + L T LS AC G +
Sbjct: 538 KNQFV-----WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVD 592
Query: 502 IGEAIAK---QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
G I ++ LEP + Y + ++L GR E + + E+ PG S++
Sbjct: 593 KGYEIFNMMIEVYNLEPSH-EHYSCMVDMLGRAGRLKEAEELMS-----EVPGGPGESML 646
Query: 559 E 559
+
Sbjct: 647 Q 647
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 124/226 (54%), Gaps = 7/226 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ +YPN VT V L++A ++EG IHG I+ GF V + + + +Y K
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGF-VSEPSVGNSFITLYAKFE 421
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A F + T + SWN +I+ + NG + EA ++F + +P+ T +
Sbjct: 422 ALEDAKKAFEDI--TFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSV 478
Query: 121 I--LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK 177
+ ++ AE + G+ H +++++G+ V +AL+D+Y+K ++ ++ K+F + K
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ ++ +++ Y + +N+FH+MIK +V+P++ FL++++A
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 158 LYSKFDVTKARKMFERLRNKDAVI-YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
YS + + A K+F+ ++A N ++ L+ + P A+++F E +++
Sbjct: 20 FYSPYRI--AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMD 77
Query: 217 FLNLISAVSDLR-DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 275
+ L A+ R D++ IHG+ + + V ++N ++ Y K G A +F +
Sbjct: 78 EVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL 137
Query: 276 RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR---ENLRIDSVTLISLLQ-ALSQLGCL 331
D+VSW ++++G+ D+ I + R + D+ T + L + G L
Sbjct: 138 VDPDVVSWNTILSGF------DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 332 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAY 391
+ ++ + +L V NS IT Y++ G AR +F +M+ + + SWN++L
Sbjct: 192 LGL-QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 392 AMHGNYA-EVLKLFNHMKLGNIKPDELTFTSILTACSH 428
+ G + E + +F M ++ D ++FTS++T C H
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 227/403 (56%), Gaps = 3/403 (0%)
Query: 167 ARKMFERLRNKDAV---IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
ARK+F+ + + + ++ M GY +N P +A+ V+ +M+ + P + A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
DL+D+R+ R IH +++ + + N ++ Y + G AR VF+ M R++V+W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
S+I+ + E LFR +Q E + TL ++L A S++ L KE+H +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
+ ++ + NSL+ Y KCG++ +R +F M + L SWN ML YA++GN EV+ L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F M + PD +TF ++L+ CS +GL E GL +F M E+ + P HY C++D+L
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 464 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 523
RAG++ EA ++++MP S++ +LL++CRL+G+ +GE AK++ LEP N +YV+
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVM 545
Query: 524 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
+SNI A+ WD V IR M K + +K G S +++ + ++
Sbjct: 546 VSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQI 588
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 180/394 (45%), Gaps = 18/394 (4%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNAT 75
LLHA SL G I + + + L+ ++ C + +A +F + +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 76 ST-TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
S T W + Y NG +A ++ M+ + P +++ A+ +C +L L G+
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMTGYLK 191
IH +++ + D V L+ LY + FD ARK+F+ + ++ V +N +++ K
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD--DARKVFDGMSERNVVTWNSLISVLSK 314
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
E N+F +M + + + A ++ A S + + + IH +L+ + V +
Sbjct: 315 KVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPL 374
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
N ++ Y KCG ++Y+R VF+ M ++DL SW M+ Y +G+I+E I LF + +
Sbjct: 375 LNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS------LITTYAKCGK 365
D +T ++LL S G + L+ E V+ + L+ + GK
Sbjct: 435 APDGITFVALLSGCSDTGLTE-----YGLSLFERMKTEFRVSPALEHYACLVDILGRAGK 489
Query: 366 LNMARYLFQQMTERCLTS-WNAMLGAYAMHGNYA 398
+ A + + M + S W ++L + +HGN +
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVS 523
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 16/297 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P ++ L A L L+ GR IH ++R V D++ LL +Y + G A
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV-DQVVYNVLLKLYMESGLFDDARK 292
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF M + V +WN LI+ + E F LFR+M + TL + +C+ +
Sbjct: 293 VFDGM--SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
L GK IH +++ +PD+ +L+D+Y K +V +R++F+ + KD +N+M+
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
Y N E IN+F MI+ V+P+ F+ L+S SD + +G L +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD-----TGLTEYGLSLFERMK 465
Query: 247 TRVEIANQIIH------TYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHI 296
T ++ + H + G ++ A V M + S W S++ HG++
Sbjct: 466 TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNV 522
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ++ + + TL ++L A +++ +L G+ IH I + D +L+DMY KCG
Sbjct: 328 MQEEMIGFSWATLTTILPACSRVAALLTGKEIHA-QILKSKEKPDVPLLNSLMDMYGKCG 386
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V+ + VF M + + SWN ++ Y NG E LF MI V PD +T
Sbjct: 387 EVEYSRRVFDVM--LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVAL 444
Query: 121 ILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
+ C++ +G S+ M V P + LVD+ + + +A K+ E + K
Sbjct: 445 LSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKP 504
Query: 179 A 179
+
Sbjct: 505 S 505
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 258/520 (49%), Gaps = 36/520 (6%)
Query: 44 CDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFR 103
C+ L+ Y V A VF ++ + + N +I +Y++NG E ++F
Sbjct: 72 CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII--INVMIRSYVNNGFYGEGVKVFG 129
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD 163
M V PD T + +C+ + G+ IHG ++G+ + LV +Y K
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189
Query: 164 -VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
+++AR + + + +D V +N ++ GY +N +A+ V EM + +S + +L+
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
AVS+ T E + Y + +F +M + LVS
Sbjct: 250 AVSN--------------------TTTE-------------NVMYVKDMFFKMGKKSLVS 276
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
W MI Y+ + EA+ L+ ++ + D+V++ S+L A LS K++H
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
R L + N+LI YAKCG L AR +F+ M R + SW AM+ AY G + +
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
LF+ ++ + PD + F + L ACSH+GL+EEG F+ M Y I P H C++DLL
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 463 SRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV 522
RAG++ EAY ++ M + LL ACR++ DT+IG A ++ +L P S YV
Sbjct: 457 GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV 516
Query: 523 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 562
L+SNI A+ GRW+EV +IR + K K LK PG S +E+++
Sbjct: 517 LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 15/342 (4%)
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
SP +FL L + DIR R++H ++ + +++ YA + AR
Sbjct: 37 SPQETVFL-LGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARK 95
Query: 271 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 330
VF+ + R+++ MI YV++G E + +F + N+R D T +L+A S G
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
+ +++H + L V N L++ Y KCG L+ AR + +M+ R + SWN+++
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
YA + + + L++ M+ I D T S+L A S++ E + + M +
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KK 272
Query: 451 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIA 507
V +N +I + + EA L M + + ++ ++L AC GDT ++
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC---GDTS-ALSLG 328
Query: 508 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 549
K+I R LI N+L E D A + K +++
Sbjct: 329 KKIHGYIERKK----LIPNLLLENALIDMYAKCGCLEKARDV 366
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ P+ V++ S+L A +L G+ IHGY R+ + + + E L+DMY KCG
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL-IPNLLLENALIDMYAKCG 358
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF M S V SW +I+AY +G+ +A LF ++ ++PD +
Sbjct: 359 CLEKARDVFENMK--SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 161
+ +C+ L G+S M + P + +VDL +
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 288/546 (52%), Gaps = 17/546 (3%)
Query: 29 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 88
G +H ++ G CD + +L+ MY K VF +M T S+ +I +
Sbjct: 66 GAQLHCLCLKAG-ADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTV--SYCSIINS 122
Query: 89 YLHNGQALEAFELFRQMIHRKVLP------DLLTLANAILSCAELDYLCHGKSIHGYMIR 142
+G EA +L ++M +P LL L + S +++ + H ++
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL----VLVD 178
Query: 143 MGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
++ ++ TALVD+Y KFD A +F+++ K+ V + M++G + N +++
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 202 FHEMIKMSVSPNVALFLNLISAVSDLR-DIRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
F M + ++ PN L+++ A +L L + IHG+ RH + + Y
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 261 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 320
+CG + +R++F + RD+V W+SMI+GY G E + L +++E + +SVTL++
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
++ A + LS VH + + + N+LI YAKCG L+ AR +F ++TE+
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
L SW++M+ AY +HG+ +E L++F M G + D++ F +IL+AC+H+GLVEE IF
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 500
+ + V E HY C I+LL R G++ +A+ + +MP S+ +LLSAC +G
Sbjct: 479 QAGKYHMPVTLE-HYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 501 EI-GEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
++ G+ IA +++K EP N ++YVL+S I E G + +R + + ++L G+S IE
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Query: 560 LDKQRE 565
+ Q E
Sbjct: 598 PELQIE 603
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 10/315 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKL--GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 58
MQ + L PNRVTL+S+L A +L GS + IHG++ R G DE + MY +
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGS-SLVKEIHGFSFRHGCHA-DERLTAAFMTMYCR 299
Query: 59 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
CG V ++ +F + W+ +I+ Y G E L QM + + +TL
Sbjct: 300 CGNVSLSRVLFETSKVRDVVM--WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLL 357
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
+ +C L ++H +++ G ++ AL+D+Y+K ++ AR++F L K
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
D V ++ M+ Y + EA+ +F MIK + FL ++SA + + A++I
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHI 296
++ +E I+ + G + A + N W+S+++ HG +
Sbjct: 478 TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 297 DEA--IILFRLLQRE 309
D A II L++ E
Sbjct: 538 DVAGKIIANELMKSE 552
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 284/567 (50%), Gaps = 38/567 (6%)
Query: 4 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-----RGFGVCDEIFETTLLDMYHK 58
++ P+ T+VS+ L +EGRA+HGY +R R V + + +DMY K
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV-----IDMYGK 441
Query: 59 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP--DLLT 116
CG A +F T + SWN +I+A+ NG +A LF++++ L T
Sbjct: 442 CGLTTQAELLF--KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLST 499
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN 176
+ + SC D L GKS+H ++ ++G DL S F + M E
Sbjct: 500 VLAILTSCDSSDSLIFGKSVHCWLQKLG------------DLTSAF--LRLETMSE---T 542
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARS 235
+D +N +++G + +E++ F M + + ++ L ISA +L + R
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
HG ++ ++ N +I Y +C ++ A VF + +L SW +I+ +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNN 354
E LFR L+ L + +T + LL A +QLG S + HC L R F V+
Sbjct: 663 GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPF-VSA 718
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IK 413
+L+ Y+ CG L +F+ +++WN+++ A+ HG + ++LF + + ++
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 473
P++ +F S+L+ACSHSG ++EGL ++ M ++ + P H I+D+L RAG+L EAY
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 474 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGR 533
+ + + LLSAC +GDT++G+ +A+ + ++EP N+S Y+ ++N G
Sbjct: 839 FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGG 898
Query: 534 WDEVAHIRAMTKDKELKSTPGYSLIEL 560
W+E +R M +D LK PGYS+I++
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 229/511 (44%), Gaps = 61/511 (11%)
Query: 32 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 91
+H AI G V D L+++Y K + A VF M + SWN ++ L
Sbjct: 210 LHCLAIETGL-VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRD--IVSWNTIMTKCLA 266
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD--M 149
NG ++ + F+ M D +T + I +C+ ++ L G+S+HG +I+ G P+ +
Sbjct: 267 NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHV 326
Query: 150 VACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
+++ +YSK D A +FE L +D + N ++ G+ N + EA + ++M +
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 209 S-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR-VEIANQIIHTYAKCGYLQ 266
+ P++A +++ S DL R R++HGY +R + +R +E+ N +I Y KCG
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN--LRIDSVTLISLLQA 324
A L+F RDLVSW SMI+ + +G +A LF+ + E + T++++L +
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTS 506
Query: 325 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE-RCLTS 383
L K VHC K G L A + M+E R LTS
Sbjct: 507 CDSSDSLIFGKSVHCW-------------------LQKLGDLTSAFLRLETMSETRDLTS 547
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEG------- 435
WN+++ A G++ E L+ F M + G I+ D +T ++A + GLV +G
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 436 ---------------------LQIFRSMIREYTIV--PGEVHYNCIIDLLSRAGQLTEAY 472
+ S ++ + ++ P +NC+I LS+ E +
Sbjct: 608 IKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVF 667
Query: 473 NLVKSMPSTHSSAALCTLLSACRLYGDTEIG 503
L +++ + LLSA G T G
Sbjct: 668 QLFRNLKLEPNEITFVGLLSASTQLGSTSYG 698
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 223/476 (46%), Gaps = 30/476 (6%)
Query: 30 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 89
R++H +A++ G + D + LL Y + G + ++ +F ++ V WN +I A
Sbjct: 107 RSVHCFALKCGL-LQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIV--WNSMITAL 163
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 149
NG+ + A LF +MIH+ D TL A + + L +H I G+ D
Sbjct: 164 NQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS 223
Query: 150 VACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
C AL++LY+K + ++ A +F + ++D V +N +MT L N P +++ F M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR--VEIANQIIHTYAKCGYLQ 266
+ F +ISA S + ++ L S+HG V++ Y V + N II Y+KCG +
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI-ILFRLLQRENLRIDSVTLISLLQAL 325
A VF + RD++S +++ G+ +G +EA IL ++ + ++ D T++S+
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 326 SQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSW 384
L + VH T R + L V NS+I Y KCG A LF+ T R L SW
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 385 NAMLGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
N+M+ A++ +G + LF + + K T +ILT+C S
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS------------- 510
Query: 443 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
+ I VH C L + G LT A+ +++M T + +++S C G
Sbjct: 511 --DSLIFGKSVH--C---WLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSG 559
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 12/402 (2%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
+S+H + ++ G+ D+ + L+ Y + ++ + +F+ L+ KD +++N M+T +N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
+ A+ +F EMI + L SA+S L R +H + + +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
N +++ YAK L A VF M RD+VSW +++T + +GH +++ F+ +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE--LSVNNSLITTYAKCGKLNMAR 370
D+VT ++ A S + L+ + +H L ++ + E +SV NS+I+ Y+KCG A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHS 429
+F+++ R + S NA+L +A +G + E + N M+ + I+PD T SI + C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 430 GLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS-AAL 487
EG + +R E EV N +ID+ + G T+A L K+ +TH +
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEV-INSVIDMYGKCGLTTQAELLFKT--TTHRDLVSW 463
Query: 488 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 529
+++SA G T + + K+++ S S +S +LA
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVS---EYSCSKFSLSTVLA 502
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 34/312 (10%)
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
+ RS+H + L+ + + +++++ Y + G L + +F+ ++ +D++ W SMIT
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
+G A+ LF + + DS TL+ ALS L +HCL
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
+ S+ N+L+ YAK L+ A +F M R + SWN ++ +G+ + L+ F M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
+ D +TF+ +++ACS I E T+ GE + +I ++G
Sbjct: 282 GSGQEADTVTFSCVISACSS--------------IEELTL--GESLHGLVI----KSGYS 321
Query: 469 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 528
EA+ V + ++ ++ S C GDTE E + ++++ R+ S I N
Sbjct: 322 PEAHVSVGN--------SIISMYSKC---GDTEAAETVFEELV---CRDVISSNAILNGF 367
Query: 529 AEGGRWDEVAHI 540
A G ++E I
Sbjct: 368 AANGMFEEAFGI 379
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 277/525 (52%), Gaps = 13/525 (2%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
++ Y K + +A +F ++ T S+N LI+ Y + A LF++M
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTV--SYNTLISGYADARETFAAMVLFKRMRKLG 135
Query: 110 VLPDLLTLANAILSCAE-LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-A 167
D TL+ I +C + +D + K +H + + G + A V YSK + + A
Sbjct: 136 FEVDGFTLSGLIAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 168 RKMFERLRN-KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
+F + +D V +N M+ Y ++ +A+ ++ EMI ++ ++++A++
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY---LQYARLVFNRMRSRDLVSW 283
L + R HG +++ + + + +I Y+KCG + + VF + S DLV W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 284 TSMITGYVHHGHI-DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
+MI+GY + + +EA+ FR +QR R D + + + A S L S K++H L
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 343 RA-FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
++ +SVNN+LI+ Y K G L AR++F +M E S+N M+ YA HG+ E L
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEAL 432
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
L+ M I P+++TF ++L+AC+H G V+EG + F +M + I P HY+C+IDL
Sbjct: 433 LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL 492
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 521
L RAG+L EA + +MP S A LL ACR + + + E A +++ ++P ++ Y
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPY 552
Query: 522 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
V+++N+ A+ +W+E+A +R + K ++ PG S IE+ K++ V
Sbjct: 553 VMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 209/502 (41%), Gaps = 83/502 (16%)
Query: 109 KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV----------------------- 145
K DLL + S AE D L GKS+H ++ V
Sbjct: 9 KTFRDLL-----LKSVAERD-LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYA 62
Query: 146 --------EPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 196
EP++ + +V Y+K + AR++F+ + D V YN +++GY
Sbjct: 63 RAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETF 122
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
A+ +F M K+ + LI+A D D L + +H + + + + + N +
Sbjct: 123 AAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFV 180
Query: 257 HTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDS 315
Y+K G L+ A VF M RD VSW SMI Y H +A+ L++ + + +ID
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 316 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM---ARYL 372
TL S+L AL+ L L ++ H +A + V + LI Y+KCG + + +
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYA-EVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 431
FQ++ L WN M+ Y+M+ + E +K F M+ +PD+ +F + +ACS+
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC--- 488
+ QI I+ + N +I L ++G L +A + MP ++ + C
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 489 -------------------------------TLLSACRLYGDTEIGEA---IAKQILKLE 514
+LSAC G + G+ K+ K+E
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 515 PRNSSSYVLISNILAEGGRWDE 536
P + Y + ++L G+ +E
Sbjct: 481 PE-AEHYSCMIDLLGRAGKLEE 501
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 9/220 (4%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM---AAAV 68
TL S+L+A L L GR HG I+ GF + + L+D Y KCGG + V
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHV-GSGLIDFYSKCGGCDGMYDSEKV 300
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQ-ALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
F ++ + V WN +I+ Y N + + EA + FRQM PD + +C+ L
Sbjct: 301 FQEILSPDLVV--WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVAC-TALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 185
K IHG I+ + + ++ AL+ LY K ++ AR +F+R+ +AV +N M
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
+ GY ++ EA+ ++ M+ ++PN F+ ++SA +
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACA 458
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 277/567 (48%), Gaps = 69/567 (12%)
Query: 56 YHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 115
+ K G + +A +F M V + N L+ Y+ NG A EA LF+++ D +
Sbjct: 134 FAKAGELSVARRLFNAM--PEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAI 188
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD------------ 163
TL + +CAEL+ L GK IH ++ GVE D ++LV++Y+K
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 164 --------------------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 203
V ++R +F+R N+ +++N M++GY+ N++ +EA+ +F+
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA----------- 252
EM + + +I+A L + + +H + + I + +A
Sbjct: 309 EM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 253 --------------------NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
N +I Y CG + A+ VF R+ ++ L+SW SM G+
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+G E + F + + +L D V+L S++ A + + L ++V + V
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
++SLI Y KCG + R +F M + WN+M+ YA +G E + LF M + I
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
+P ++TF +LTAC++ GLVEEG ++F SM ++ VP + H++C++DLL+RAG + EA
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAI 607
Query: 473 NLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 532
NLV+ MP + ++L C G +G+ A++I++LEP NS +YV +S I A G
Sbjct: 608 NLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSG 667
Query: 533 RWDEVAHIRAMTKDKELKSTPGYSLIE 559
W+ A +R + ++ + PG S +
Sbjct: 668 DWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/594 (21%), Positives = 236/594 (39%), Gaps = 151/594 (25%)
Query: 14 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 73
V LL + + R +G +++GF I LL MY + G + +A +F +M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM- 88
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
SWN +I Y+++G+ + F M R
Sbjct: 89 -PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER------------------------- 122
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
D + +V ++K +++ AR++F + KD V N ++ GY+ N
Sbjct: 123 --------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
EA+ +F E+ + S + ++ A ++L ++ + IH +L ++
Sbjct: 169 GYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMN 225
Query: 253 NQIIHTYAKCGYLQYA-------------------------------RLVFNRMRSRDLV 281
+ +++ YAKCG L+ A R +F+R +R ++
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 282 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 341
W SMI+GY+ + EA++LF ++ E R DS TL +++ A LG L K++HC
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 342 -------------------------------YRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+ + + NS+I Y CG+++ A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS--- 427
+F+++ + L SWN+M ++ +G E L+ F+ M ++ DE++ +S+++AC+
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 428 --------------------------------HSGLVEEGLQIFRSMIREYTIVPGEVHY 455
G VE G ++F +M++ EV +
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK-----SDEVPW 519
Query: 456 NCIIDLLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAI 506
N +I + GQ EA +L K M + +L+AC G E G +
Sbjct: 520 NSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 154/318 (48%), Gaps = 37/318 (11%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFG 70
TL ++++A LG L+ G+ +H +A + FG+ D+I +TLLDMY KCG A +F
Sbjct: 320 TLAAVINACIGLGFLETGKQMHCHACK--FGLIDDIVVASTLLDMYSKCGSPMEACKLFS 377
Query: 71 KMNATST-----------------------------TVGSWNPLIAAYLHNGQALEAFEL 101
++ + T ++ SWN + + NG +E E
Sbjct: 378 EVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEY 437
Query: 102 FRQMIHRKVLP-DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 160
F QM H+ LP D ++L++ I +CA + L G+ + +G++ D V ++L+DLY
Sbjct: 438 FHQM-HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 161 KFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 219
K V R++F+ + D V +N M++GY N EAI++F +M + P F+
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 220 LISAVSDLRDIRLARSI-HGYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRS 277
+++A + + R + + H ++ E + ++ A+ GY++ A LV
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 278 RDLVSWTSMITGYVHHGH 295
D W+S++ G V +G+
Sbjct: 617 VDGSMWSSILRGCVANGY 634
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 340 LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE 399
L + F + V N L+ Y++ GK+ +AR LF +M +R SWN M+ Y G
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGT 111
Query: 400 VLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCII 459
L+ F+ M + D ++ +++ + +G + ++F +M + + + + I+
Sbjct: 112 SLRFFDMMP----ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 460 DLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQIL 511
+ G EA L K + + + L T+L AC + G+ I QIL
Sbjct: 168 N-----GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQIL 214
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 261/481 (54%), Gaps = 44/481 (9%)
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY---SKFD-----VTKARKMFERL 174
SC+ L K IHG+++R + D+ + L+ L S F+ + A +F ++
Sbjct: 21 SCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
+N + ++N+++ + P +A + +M+K + P+ F LI A S++ + +
Sbjct: 78 QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGE 137
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 294
H ++R + V + N ++H YA CG++ A +F +M RD+VSWTSM+ GY G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 295 HID-------------------------------EAIILFRLLQRENLRIDSVTLISLLQ 323
++ +AI LF ++RE + + ++S++
Sbjct: 198 MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVIS 257
Query: 324 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS 383
+ + LG L + + ++ L + +L+ + +CG + A ++F+ + E S
Sbjct: 258 SCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
W++++ A+HG+ + + F+ M LG I P ++TFT++L+ACSH GLVE+GL+I+ +M
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 443 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI 502
+++ I P HY CI+D+L RAG+L EA N + M ++ L LL AC++Y +TE+
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEV 436
Query: 503 GEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 562
E + ++K++P +S YVL+SNI A G+WD++ +R M K+K +K PG+SLIE+D
Sbjct: 437 AERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDG 496
Query: 563 Q 563
+
Sbjct: 497 K 497
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 184/416 (44%), Gaps = 40/416 (9%)
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A +F ++ + V +N LI + + +AF + QM+ ++ PD +T I +
Sbjct: 70 AYGIFSQIQNPNLFV--FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD--------------------- 163
+E++ + G+ H ++R G + D+ +LV +Y+
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 164 -----------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
V AR+MF+ + +++ +++M+ GY KN+ +AI++F M + V
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
N + +++IS+ + L + + YV++ + + ++ + +CG ++ A VF
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 332
+ D +SW+S+I G HGH +A+ F + VT ++L A S G +
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 333 AVKEVHCLTYRAFHGKE--LSVNNSLITTYAKCGKLNMAR-YLFQQMTERCLTSWNAMLG 389
E++ + HG E L ++ + GKL A ++ + + A+LG
Sbjct: 368 KGLEIY-ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
A ++ N EV + +M L +KP+ + +L+ + ++ R M++E
Sbjct: 427 ACKIYKN-TEVAERVGNM-LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 35/257 (13%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M R++P+ +T L+ A++++ + G H +R GF D E +L+ MY CG
Sbjct: 108 MLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN-DVYVENSLVHMYANCG 166
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK----------- 109
+ A +FG+M V SW ++A Y G A E+F +M HR
Sbjct: 167 FIAAAGRIFGQMGFRD--VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGY 224
Query: 110 --------------------VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 149
V+ + + + I SCA L L G+ + Y+++ + ++
Sbjct: 225 AKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNL 284
Query: 150 VACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
+ TALVD++ + D+ KA +FE L D++ ++ ++ G + +A++ F +MI +
Sbjct: 285 ILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
Query: 209 SVSPNVALFLNLISAVS 225
P F ++SA S
Sbjct: 345 GFIPRDVTFTAVLSACS 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + N +VS++ + A LG+L+ G + Y ++ V + I T L+DM+ +CG
Sbjct: 240 MKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDMFWRCG 298
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF + T + SW+ +I +G A +A F QMI +P +T
Sbjct: 299 DIEKAIHVFEGLPETDSL--SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAV 356
Query: 121 ILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
+ +C+ + G I+ M + G+EP + +VD+ +
Sbjct: 357 LSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGR 398
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 237/418 (56%), Gaps = 12/418 (2%)
Query: 146 EPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
EPD + ++ Y + + KA+ F+R+ KDA +N M+TGY + +A +F+
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 205 MI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
M+ K VS N +IS + D+ A + + + V +I Y K
Sbjct: 181 MMEKNEVSWNA-----MISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 264 YLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 322
++ A +F M +++LV+W +MI+GYV + ++ + LFR + E +R +S L S L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 323 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT 382
S+L L +++H + ++ +++ SLI+ Y KCG+L A LF+ M ++ +
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV 351
Query: 383 SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
+WNAM+ YA HGN + L LF M I+PD +TF ++L AC+H+GLV G+ F SM
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 443 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI 502
+R+Y + P HY C++DLL RAG+L EA L++SMP +A TLL ACR++ + E+
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Query: 503 GEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
E A+++L+L +N++ YV ++NI A RW++VA +R K+ + PGYS IE+
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 180/394 (45%), Gaps = 22/394 (5%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N +T SLL +K S R + + + D +L Y + + A +
Sbjct: 91 NTITWNSLLIGISKDPS----RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F +M SWN +I Y G+ +A ELF M+ + + + + + C +L+
Sbjct: 147 FDRM--PFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV-SWNAMISGYIECGDLE 203
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR-NKDAVIYNVMM 186
H ++ +VA TA++ Y K V A MF+ + NK+ V +N M+
Sbjct: 204 KASH-------FFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMI 256
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
+GY++N P + + +F M++ + PN + + + S+L ++L R IH V +
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC 316
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
V +I Y KCG L A +F M+ +D+V+W +MI+GY HG+ D+A+ LFR +
Sbjct: 317 NDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
Query: 307 QRENLRIDSVTLISLLQALSQLGCLS---AVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
+R D +T +++L A + G ++ A E Y+ + ++ +
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV--EPQPDHYTCMVDLLGRA 434
Query: 364 GKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGN 396
GKL A L + M R + + +LGA +H N
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKN 468
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M ++ + PN L S L ++L +LQ GR IH I +C+++ T+L+ MY KC
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIH--QIVSKSTLCNDVTALTSLISMYCKC 332
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A +F M V +WN +I+ Y +G A +A LFR+MI K+ PD +T
Sbjct: 333 GELGDAWKLFEVMKKKD--VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA 390
Query: 120 AILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
+L+C + G + M+R VEP T +VDL +
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 159/411 (38%), Gaps = 116/411 (28%)
Query: 240 VLRHQYITRVEIANQII---HTYAKC---GYLQYARLVFNRMRSRDLVSWTSMITG---- 289
++R Y+T+ +QI A+C G + A VF+ MR+++ ++W S++ G
Sbjct: 46 LVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD 105
Query: 290 ----------------------------YVHHGHIDEAIILFRLLQRENLRIDSVTLISL 321
YV + + ++A F + + D+ + ++
Sbjct: 106 PSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTM 161
Query: 322 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVN---------------------------- 353
+ ++ G + +E L Y E+S N
Sbjct: 162 ITGYARRGEMEKARE---LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 354 --NSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
++IT Y K K+ +A +F+ MT + L +WNAM+ Y + + LKLF M
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
I+P+ +S L CS ++ G QI + ++ + T+ +I + + G+L +
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 471 AYNLVKSMP--------------STHSSA--ALC------------------TLLSACRL 496
A+ L + M + H +A ALC +L AC
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 497 YGDTEIGEAIAKQIL---KLEPRNSSSYVLISNILAEGGRWDEVAH-IRAM 543
G IG A + ++ K+EP+ Y + ++L G+ +E IR+M
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQ-PDHYTCMVDLLGRAGKLEEALKLIRSM 447
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 268/554 (48%), Gaps = 71/554 (12%)
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 137
T+ S++ LI A ++ +F +M ++PD L N CAEL GK IH
Sbjct: 80 TIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH 139
Query: 138 GYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI--------------- 181
G++ D ++ +Y + + ARK+F+R+ +KD V
Sbjct: 140 CVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLE 199
Query: 182 --------------------YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 221
+N +++G+ ++ EA+ +F ++ + P+ +++
Sbjct: 200 EVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
Query: 222 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----- 276
+V D + + R IHGYV++ + + + +I Y K G++ +FN+
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAG 319
Query: 277 ---------SRD---------------------LVSWTSMITGYVHHGHIDEAIILFRLL 306
SR+ +VSWTS+I G +G EA+ LFR +
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
Q ++ + VT+ S+L A + L + H R + V ++LI YAKCG++
Sbjct: 380 QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
N+++ +F M + L WN+++ ++MHG EV+ +F + +KPD ++FTS+L+AC
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
GL +EG + F+ M EY I P HY+C+++LL RAG+L EAY+L+K MP S
Sbjct: 500 GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCV 559
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
LL++CRL + ++ E A+++ LEP N +YVL+SNI A G W EV IR +
Sbjct: 560 WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMES 619
Query: 547 KELKSTPGYSLIEL 560
LK PG S I++
Sbjct: 620 LGLKKNPGCSWIQV 633
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 205/464 (44%), Gaps = 76/464 (16%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
L P+ L +L A+L + + G+ IH + G + D + ++ MY +CG + A
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM-DAFVQGSMFHMYMRCGRMGDA 170
Query: 66 AAVFGKMN---------------------------------ATSTTVGSWNPLIAAYLHN 92
VF +M+ + SWN +++ + +
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 93 GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVAC 152
G EA +F+++ H PD +T+++ + S + + L G+ IHGY+I+ G+ D
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI 290
Query: 153 TALVDLYSK-------------FD-------------------VTKARKMFERLRNK--- 177
+A++D+Y K F+ V KA +MFE + +
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 178 -DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
+ V + ++ G +N +EA+ +F EM V PN +++ A ++ + RS
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
HG+ +R + V + + +I YAKCG + +++VFN M +++LV W S++ G+ HG
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNS 355
E + +F L R L+ D ++ SLL A Q+G + + + K L +
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 356 LITTYAKCGKLNMARYLFQQM---TERCLTSWNAMLGAYAMHGN 396
++ + GKL A L ++M + C+ W A+L + + N
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCV--WGALLNSCRLQNN 572
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 109/223 (48%), Gaps = 1/223 (0%)
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H +L+ I+ ++I +Y+ A LV + + S++S+I
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
++I +F + L DS L +L + ++L K++HC++ + + V S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
Y +CG++ AR +F +M+++ + + +A+L AYA G EV+++ + M+ I+ +
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCII 459
+++ IL+ + SG +E + +F+ I P +V + ++
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVL 259
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 6/163 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKC 59
MQ + PN VT+ S+L A + +L GR+ HG+A+R + D + + L+DMY KC
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR--VHLLDNVHVGSALIDMYAKC 436
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + ++ VF M + + WN L+ + +G+A E +F ++ ++ PD ++ +
Sbjct: 437 GRINLSQIVFNMM--PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 120 AILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 161
+ +C ++ G M G++P + + +V+L +
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 262/521 (50%), Gaps = 35/521 (6%)
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHR---KVLPDLLTLANAILSCAELDYLCH 132
+ + SWN I + + E+F L++QM+ + PD T CA+L
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 191
G I G+++++ +E A + +++ D+ ARK+F+ +D V +N ++ GY K
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
+AI V+ M V P+ + L+S+ S L D+ + + YV + + +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID-------------- 297
N ++ ++KCG + AR +F+ + R +VSWT+MI+GY G +D
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 298 -----------------EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
+A+ LF+ +Q N + D +T+I L A SQLG L +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
+ +++ SL+ YAKCG ++ A +F + R ++ A++G A+HG+ +
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
+ FN M I PDE+TF +L+AC H G+++ G F M + + P HY+ ++D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
LL RAG L EA L++SMP +A LL CR++G+ E+GE AK++L+L+P +S
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 521 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
YVL+ + E W++ R M ++ ++ PG S IE++
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 151/336 (44%), Gaps = 47/336 (13%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + P+ VT++ L+ + + LG L G+ + Y G + + L+DM+ KCG
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV-NALMDMFSKCG 306
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNG--------------------------- 93
+ A +F N T+ SW +I+ Y G
Sbjct: 307 DIHEARRIFD--NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 94 ----QALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 149
+ +A LF++M PD +T+ + + +C++L L G IH Y+ + + ++
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 150 VACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
T+LVD+Y+K ++++A +F ++ ++++ Y ++ G + AI+ F+EMI
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH------TYAKC 262
++P+ F+ L+SA I+ R Q +R + Q+ H +
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFS-----QMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 263 GYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHID 297
G L+ A RL+ + D W +++ G HG+++
Sbjct: 540 GLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVE 575
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 23/255 (9%)
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL---RIDSVTLIS 320
YL Y+ + + + ++ SW I G+ + E+ +L++ + R R D T
Sbjct: 102 YLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPV 161
Query: 321 LLQALSQLGCLSAVKEV---HCLTYRAFHGKEL--SVNNSLITTYAKCGKLNMARYLFQQ 375
L + + L LS++ + H L R EL V+N+ I +A CG + AR +F +
Sbjct: 162 LFKVCADLR-LSSLGHMILGHVLKLRL----ELVSHVHNASIHMFASCGDMENARKVFDE 216
Query: 376 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEG 435
R L SWN ++ Y G + + ++ M+ +KPD++T ++++CS G + G
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 436 LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY----NLVK----SMPSTHSSAAL 487
+ F ++E + N ++D+ S+ G + EA NL K S + S A
Sbjct: 277 KE-FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYAR 335
Query: 488 CTLLSACR-LYGDTE 501
C LL R L+ D E
Sbjct: 336 CGLLDVSRKLFDDME 350
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 285/549 (51%), Gaps = 19/549 (3%)
Query: 20 AAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNATSTT 78
+A L L + + HG+ +++G + + +F + LL Y K A +F +M +
Sbjct: 46 SASLDHLSDVKQEHGFMVKQG--IYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRN-- 101
Query: 79 VGSWNPLIAAYLH-----NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
+ +WN LI + N +A F +++ V D ++ I C + + G
Sbjct: 102 IVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAG 161
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 192
+H M++ G+E T+LV Y K + +AR++FE + ++D V++N +++ Y+ N
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLN 221
Query: 193 DLPVEAINVFHEM--IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+ EA + M K + F +L+SA I + IH + + Y +
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIP 277
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+A +++ YAK +L AR F M R++VSW +MI G+ +G EA+ LF + EN
Sbjct: 278 VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN 337
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
L+ D +T S+L + ++ + +K+V + + LSV NSLI++Y++ G L+ A
Sbjct: 338 LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEAL 397
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
F + E L SW +++GA A HG E L++F M L ++PD++TF +L+ACSH G
Sbjct: 398 LCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGG 456
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
LV+EGL+ F+ M Y I + HY C+IDLL RAG + EA +++ SMP+ S+ AL
Sbjct: 457 LVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAF 516
Query: 491 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 550
C ++ E + AK++L++EP +Y ++SN G W++ A +R +
Sbjct: 517 TGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYN 576
Query: 551 -STPGYSLI 558
TPG S +
Sbjct: 577 PKTPGCSWL 585
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/614 (28%), Positives = 300/614 (48%), Gaps = 76/614 (12%)
Query: 27 QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN-ATSTTVGSWNPL 85
Q+ R +H + F L+ +Y + G + A VF ++ + + WN +
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 86 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 145
+ A + +G A EL+R M R + D L + +C L ++ H +I++G+
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 146 EPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
+ ++ L+ LY K + A +F + ++ + +NVM+ G+ + A+ +F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 205 MIKMSVSPNVALFLNLIS-----------------------AVS------------DLRD 229
M + P+ + +++S AVS +L
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
+ +A +HGYV++ + + N +IH Y K G ++ A +F ++R++ + SW S+IT
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 290 YVHHGHIDEAIILF---------------------------------------RLLQREN 310
+V G +DEA+ LF R +Q
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK 429
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+ +SVT+ +L ++L L+ +E+H R + + V N+L+ YAKCG L+
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
+F+ + ++ L SWN+++ Y MHG + L +F+ M PD + ++L+ACSH+G
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
LVE+G +IF SM + + + P + HY CI+DLL R G L EA +VK+MP L L
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
Query: 491 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 550
L++CR++ + +I E IA Q+ LEP + SY+L+SNI + GGRW+E A++RA+ K K+LK
Sbjct: 610 LNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLK 669
Query: 551 STPGYSLIELDKQR 564
G S IE+ K++
Sbjct: 670 KVSGSSWIEVKKKK 683
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 76/310 (24%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQE-----------GRAIHGYAIRRGFGVCDEI-- 47
MQ + P+ VT S+L ++ G ++ G A+ G A+ F VC E+
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 48 ---------------FE------TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLI 86
FE L+ +Y K G VK A +F ++ + + SWN LI
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR--NKGIESWNSLI 367
Query: 87 AAYLHNGQALEAF---------------------------------------ELFRQMIH 107
+++ G+ EA E FRQM
Sbjct: 368 TSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQF 427
Query: 108 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTK 166
KVL + +T+ + CAEL L G+ IHG++IR + +++ ALV++Y+K +++
Sbjct: 428 SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 167 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
+FE +R+KD + +N ++ GY + +A+++F MI P+ + ++SA S
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSH 547
Query: 227 LRDIRLARSI 236
+ R I
Sbjct: 548 AGLVEKGREI 557
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ ++ N VT+ +L A+L +L GR IHG+ IR + + + L++MY KCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE-NILVQNALVNMYAKCG 483
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ + VF + SWN +I Y +G A +A +F +MI PD + L
Sbjct: 484 LLSEGSLVFEAIRDKDLI--SWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFDVTK 166
+ +C+ + G+ I M R G+EP +VDL + K
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLK 588
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 247/438 (56%), Gaps = 11/438 (2%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
+ +H ++I G T L+ L S + +F + D ++N ++ K
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
LP+ + + M+ +VSP+ F ++I + +DL +R+ + +H + + + +
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
++ Y+KCG ++ AR VF+RM + +V+W S+++G+ +G DEAI +F ++
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLITTYAKCGKLNMAR 370
DS T +SLL A +Q G +S VH Y G +L+V +LI Y++CG + AR
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVH--QYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK--LGNIKPDELTFTSILTACSH 428
+F +M E + +W AM+ AY HG + ++LFN M+ G I P+ +TF ++L+AC+H
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI-PNNVTFVAVLSACAH 322
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA-- 486
+GLVEEG +++ M + Y ++PG H+ C++D+L RAG L EAY + + +T + A
Sbjct: 323 AGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 487 -LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTK 545
+L AC+++ + ++G IAK+++ LEP N +V++SNI A G+ DEV+HIR
Sbjct: 383 LWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMM 442
Query: 546 DKELKSTPGYSLIELDKQ 563
L+ GYS+IE++ +
Sbjct: 443 RNNLRKQVGYSVIEVENK 460
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 162/305 (53%), Gaps = 11/305 (3%)
Query: 102 FRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
+R+M+ V P T + I SCA+L L GK +H + + G D ALV YSK
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 162 F-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
D+ AR++F+R+ K V +N +++G+ +N L EAI VF++M + P+ A F++L
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
+SA + + L +H Y++ V++ +I+ Y++CG + AR VF++M+ ++
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRI-DSVTLISLLQALSQLGCLSAVKEVH- 338
+WT+MI+ Y HG+ +A+ LF ++ + I ++VT +++L A + G + + V+
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 339 --CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS----WNAMLGAYA 392
+YR G E V ++ + G L+ A Q+ + W AMLGA
Sbjct: 335 RMTKSYRLIPGVEHHV--CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACK 392
Query: 393 MHGNY 397
MH NY
Sbjct: 393 MHRNY 397
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 170/334 (50%), Gaps = 11/334 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + P+ T S++ + A L +L+ G+ +H +A+ GFG+ D + L+ Y KCG
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL-DTYVQAALVTFYSKCG 156
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF +M S + +WN L++ + NG A EA ++F QM PD T +
Sbjct: 157 DMEGARQVFDRMPEKS--IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ +CA+ + G +H Y+I G++ ++ TAL++LYS+ DV KAR++F++++ +
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ M++ Y + +A+ +F++M PN F+ ++SA + + RS++
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 239 YVLR-HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS----WTSMITGYVHH 293
+ + ++ I VE ++ + G+L A +++ + + WT+M+ H
Sbjct: 335 RMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Query: 294 GHIDEAI-ILFRLLQRENLRIDSVTLISLLQALS 326
+ D + I RL+ E ++S + ALS
Sbjct: 395 RNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 164/561 (29%), Positives = 275/561 (49%), Gaps = 39/561 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + PN TL S+L L L G IHG+ I+ GF + D LL MY +C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL-DVNVVNGLLAMYAQCK 174
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A +F M V +W ++ Y NG A +A E FR + + T +
Sbjct: 175 RISEAEYLFETMEGEKNNV-TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ +CA + G +H +++ G + ++ +AL+D+Y+K ++ AR + E + D
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR-DIRLARSIHG 238
V +N M+ G ++ L EA+++F M + + + ++++ + R ++++A S H
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHC 353
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+++ Y T + N ++ YAK G + A VF M +D++SWT+++TG H+G DE
Sbjct: 354 LIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDE 413
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
A+ LF ++ + D + S+L A ++L L ++VH ++ LSVNNSL+T
Sbjct: 414 ALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVT 473
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
Y KCG L A +F M R D +T
Sbjct: 474 MYTKCGSLEDANVIFNSMEIR-----------------------------------DLIT 498
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+T ++ + +GL+E+ + F SM Y I PG HY C+IDL R+G + L+ M
Sbjct: 499 WTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM 558
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
+ +L+A R +G+ E GE AK +++LEP N+ YV +SN+ + GR DE A
Sbjct: 559 EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAA 618
Query: 539 HIRAMTKDKELKSTPGYSLIE 559
++R + K + + PG S +E
Sbjct: 619 NVRRLMKSRNISKEPGCSWVE 639
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 246/479 (51%), Gaps = 17/479 (3%)
Query: 7 YPNRVTLVS--LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKM 64
Y +R L S LL +K G + E R + R DE T++ Y +
Sbjct: 23 YADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPER-----DEFTWNTMIVAYSNSRRLSD 77
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A +F + N T+ SWN LI+ Y +G +EAF LF +M + P+ TL + + C
Sbjct: 78 AEKLF-RSNPVKNTI-SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMC 135
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN-KDAVIY 182
L L G+ IHG+ I+ G + D+ L+ +Y++ +++A +FE + K+ V +
Sbjct: 136 TSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTW 195
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
M+TGY +N +AI F ++ + N F ++++A + + R+ +H +++
Sbjct: 196 TSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK 255
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ T + + + +I YAKC ++ AR + M D+VSW SMI G V G I EA+ +
Sbjct: 256 SGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 303 FRLLQRENLRIDSVTLISLLQ--ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
F + +++ID T+ S+L ALS+ + HCL + + VNN+L+ Y
Sbjct: 316 FGRMHERDMKIDDFTIPSILNCFALSRTE-MKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AK G ++ A +F+ M E+ + SW A++ +G+Y E LKLF +M++G I PD++
Sbjct: 375 AKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTA 434
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY-NCIIDLLSRAGQLTEAYNLVKSM 478
S+L+A + L+E G Q+ + I+ + P + N ++ + ++ G L +A + SM
Sbjct: 435 SVLSASAELTLLEFGQQVHGNYIK--SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM 491
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 255/459 (55%), Gaps = 7/459 (1%)
Query: 107 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDL----YSKF 162
H K+ D + N IL ++ + L I Y I+ +E D+ L++ ++
Sbjct: 21 HSKI--DTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTES 77
Query: 163 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
++ AR +FE + D VI+N M GY + P+E ++F E+++ + P+ F +L+
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
A + + + R +H ++ V + +I+ Y +C + AR VF+R+ +V
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
+ +MITGY +EA+ LFR +Q + L+ + +TL+S+L + + LG L K +H
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
+ K + VN +LI +AKCG L+ A +F++M + +W+AM+ AYA HG + +
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
+F M+ N++PDE+TF +L ACSH+G VEEG + F M+ ++ IVP HY ++DLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 463 SRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV 522
SRAG L +AY + +P + + LL+AC + + ++ E ++++I +L+ + YV
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 523 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
++SN+ A +W+ V +R + KD++ PG S IE++
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVN 476
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 167/313 (53%), Gaps = 8/313 (2%)
Query: 21 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC---GGVKMAAAVFGKMNATST 77
+K SL+E I YAI+ + D F L++ + + A +F M+
Sbjct: 37 SKCNSLRELMQIQAYAIKSH--IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 137
+ +N + Y LE F LF +++ +LPD T + + +CA L G+ +H
Sbjct: 95 VI--FNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 138 GYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 196
+++G++ ++ C L+++Y++ DV AR +F+R+ V YN M+TGY + + P
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
EA+++F EM + PN L+++S+ + L + L + IH Y +H + V++ +I
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALI 272
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
+AKCG L A +F +MR +D +W++MI Y +HG ++++++F ++ EN++ D +
Sbjct: 273 DMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEI 332
Query: 317 TLISLLQALSQLG 329
T + LL A S G
Sbjct: 333 TFLGLLNACSHTG 345
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 8/298 (2%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKM 64
+ P+ T SLL A A +L+EGR +H +++ G+ D ++ TL++MY +C V
Sbjct: 125 ILPDNYTFPSLLKACAVAKALEEGRQLHCLSMK--LGLDDNVYVCPTLINMYTECEDVDS 182
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF ++ V +N +I Y + EA LFR+M + + P+ +TL + + SC
Sbjct: 183 ARCVFDRI--VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSC 240
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 183
A L L GK IH Y + + TAL+D+++K + A +FE++R KD ++
Sbjct: 241 ALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWS 300
Query: 184 VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS-IHGYVLR 242
M+ Y + +++ +F M +V P+ FL L++A S + R V +
Sbjct: 301 AMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR-SRDLVSWTSMITGYVHHGHIDEA 299
+ ++ ++ ++ G L+ A +++ S + W ++ H ++D A
Sbjct: 361 FGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKC 59
MQ + L PN +TL+S+L + A LGSL G+ IH YA + F C + T L+DM+ KC
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF--CKYVKVNTALIDMFAKC 278
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A ++F KM T +W+ +I AY ++G+A ++ +F +M V PD +T
Sbjct: 279 GSLDDAVSIFEKMRYKDTQ--AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 120 AILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 161
+ +C+ + G+ M+ + G+ P + ++VDL S+
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 215/380 (56%), Gaps = 2/380 (0%)
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
A ++N +M Y++++ P++AI V+ M++ +V P+ +I A + D L + +H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+R ++ + I Y K G + AR VF+ R L SW ++I G H G +E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH--CLTYRAFHGKELSVNNSL 356
A+ +F ++R L D T++S+ + LG LS ++H L + ++ + NSL
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
I Y KCG++++A ++F++M +R + SW++M+ YA +GN E L+ F M+ ++P++
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVK 476
+TF +L+AC H GLVEEG F M E+ + PG HY CI+DLLSR GQL EA +V+
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 477 SMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDE 536
MP + L+ C +GD E+ E +A +++LEP N YV+++N+ A G W +
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKD 441
Query: 537 VAHIRAMTKDKELKSTPGYS 556
V +R + K K++ P YS
Sbjct: 442 VERVRKLMKTKKVAKIPAYS 461
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 156/320 (48%), Gaps = 5/320 (1%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
WN ++ +Y+ + L+A +++ M+ VLPD +L I + ++ GK +H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
R+G D + + LY K + ARK+F+ + +N ++ G EA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA--NQIIHT 258
+F +M + + P+ +++ ++ L D+ LA +H VL+ + + +I N +I
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 259 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 318
Y KCG + A +F MR R++VSW+SMI GY +G+ EA+ FR ++ +R + +T
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMT 377
+ +L A G + K + F + LS ++ ++ G+L A+ + ++M
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 378 ERC-LTSWNAMLGAYAMHGN 396
+ + W ++G G+
Sbjct: 385 MKPNVMVWGCLMGGCEKFGD 404
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+R +L ++ AA ++ G+ +H A+R GF V DE E+ + +Y K G + A
Sbjct: 115 PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGF-VGDEFCESGFITLYCKAGEFENARK 173
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + +GSWN +I H G+A EA E+F M + PD T+ + SC L
Sbjct: 174 VFDE--NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGL 231
Query: 128 DYLCHGKSIHGYMIRMGVE--PDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 184
L +H +++ E D++ +L+D+Y K + A +FE +R ++ V ++
Sbjct: 232 GDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSS 291
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
M+ GY N +EA+ F +M + V PN F+ ++SA
Sbjct: 292 MIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-RGFGVCDEIFETTLLDMYHKC 59
M+ L P+ T+VS+ + LG L +H ++ + D + +L+DMY KC
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + +A+ +F +M V SW+ +I Y NG LEA E FRQM V P+ +T
Sbjct: 269 GRMDLASHIFEEMR--QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVG 326
Query: 120 AILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK 177
+ +C + GK+ M +EP + +VDL S+ + +A+K+ E + K
Sbjct: 327 VLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMK 386
Query: 178 DAV-IYNVMMTG 188
V ++ +M G
Sbjct: 387 PNVMVWGCLMGG 398
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 281/537 (52%), Gaps = 18/537 (3%)
Query: 32 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 91
IHGY ++ G D F + L + ++ A+++F + ++T + +N +I Y
Sbjct: 47 IHGYMVKTGLDKDD--FAVSKLLAFSSVLDIRYASSIF--EHVSNTNLFMFNTMIRGYSI 102
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
+ + AF +F Q+ + + D + + SC+ + G+ +HG +R G
Sbjct: 103 SDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL 162
Query: 152 CTALVDLYSKF-DVTKARKMFERL-RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
AL+ Y ++ ARK+F+ + ++ DAV ++ +M GYL+ A+++F M K
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
V NV+ L+ +SA+SDL D+ A S H ++ + + +I Y K G + AR
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
+F+ +D+V+W MI Y G ++E + L R ++ E ++ +S T + LL + +
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
+ V L + + +L+ YAK G L A +F +M ++ + SW AM+
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 390 AYAMHGNYAEVLKLFNHMKLGN--IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 447
Y HG E + LFN M+ N ++P+E+TF +L ACSH GLV EG++ F+ M+ Y+
Sbjct: 403 GYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYS 462
Query: 448 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 507
P HY C++DLL RAGQL EAY L++++P T S A LL+ACR+YG+ ++GE++
Sbjct: 463 FTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVM 522
Query: 508 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL---KSTPGYSLIELD 561
++ ++ + + +L++ A G ++ + D EL + GYS IE++
Sbjct: 523 MRLAEMGETHPADAILLAGTHAVAGNPEK-------SLDNELNKGRKEAGYSAIEIE 572
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 203/407 (49%), Gaps = 19/407 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
++ + L +R + ++ L + ++ + G +HG A+R GF V ++ L+ Y CG
Sbjct: 116 LRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL-RNALIHFYCVCG 174
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF +M + V +++ L+ YL + A +LFR M +V+ ++ TL +
Sbjct: 175 KISDARKVFDEMPQSVDAV-TFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ + ++L L +S H I++G++ D+ TAL+ +Y K ++ AR++F+ KD
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V +N M+ Y K L E + + +M + PN + F+ L+S+ + + R++
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL 353
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+ + + ++ YAK G L+ A +FNRM+ +D+ SWT+MI+GY HG EA
Sbjct: 354 LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREA 413
Query: 300 IILFRLLQREN--LRIDSVTLISLLQALSQLG-------CLSAVKEVHCLTYRAFHGKEL 350
+ LF ++ EN +R + +T + +L A S G C + E + T + H
Sbjct: 414 VTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEH---- 469
Query: 351 SVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
++ + G+L A L + + T+W A+L A ++GN
Sbjct: 470 --YGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN 514
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 271/516 (52%), Gaps = 24/516 (4%)
Query: 52 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 111
L+ Y K G + A VF M V SW L+ Y+HNG+ A LF +M + +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLM--PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 112 PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV-DLYSKFDVTKARKM 170
+ L L +D C + M + D +A T+++ L + V +AR++
Sbjct: 143 SWTVMLI-GFLQDGRIDDACK-------LYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 171 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA--VSDLR 228
F+ + + + + M+TGY +N+ +A +F M + + ++ + + + D
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
++ + V N +I + G + AR VF+ M+ R+ SW ++I
Sbjct: 255 EL----------FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIK 304
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
+ +G EA+ LF L+Q++ +R TLIS+L + L L K+VH R
Sbjct: 305 IHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV 364
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
++ V + L+T Y KCG+L ++ +F + + + WN+++ YA HG E LK+F M
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 409 L-GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 467
L G+ KP+E+TF + L+ACS++G+VEEGL+I+ SM + + P HY C++D+L RAG+
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 468 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNI 527
EA ++ SM +A +LL ACR + ++ E AK+++++EP NS +Y+L+SN+
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNM 544
Query: 528 LAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
A GRW +VA +R + K + ++ +PG S E++ +
Sbjct: 545 YASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 56/322 (17%)
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ +ARK+F+ +K +N M+ GY N +P +A +F EM P+ N+IS
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD----RNIIS- 81
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
N ++ Y K G + AR VF+ M R++VSW
Sbjct: 82 ----------------------------WNGLVSGYMKNGEIDEARKVFDLMPERNVVSW 113
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
T+++ GYVH+G +D A LF + +N +V LI LQ + C Y
Sbjct: 114 TALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQ--------DGRIDDACKLYE 165
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
K+ S+I K G+++ AR +F +M+ER + +W M+ Y + + K+
Sbjct: 166 MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKI 225
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F+ M + E+++TS+L +G +E+ ++F M + I N +I L
Sbjct: 226 FDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA-----CNAMISGLG 276
Query: 464 RAGQLTEAYNLVKSMPSTHSSA 485
+ G++ +A + SM + ++
Sbjct: 277 QKGEIAKARRVFDSMKERNDAS 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ Q + P TL+S+L A L SL G+ +H +R F V D + L+ MY KCG
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV-DVYVASVLMTMYIKCG 380
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM-IHRKVLPDLLTLAN 119
+ + +F + S + WN +I+ Y +G EA ++F +M + P+ +T
Sbjct: 381 ELVKSKLIFDRF--PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 120 AILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK 161
+ +C+ + G I+ M + GV+P +VD+ +
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 204/335 (60%), Gaps = 1/335 (0%)
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 286
+ D+RL +IH V+R + + + + N ++H YA CG + A VF++M +DLV+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 287 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 346
I G+ +G +EA+ L+ + + ++ D T++SLL A +++G L+ K VH +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
+ L +N L+ YA+CG++ A+ LF +M ++ SW +++ A++G E ++LF +
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 407 MK-LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
M+ + P E+TF IL ACSH G+V+EG + FR M EY I P H+ C++DLL+RA
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 466 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 525
GQ+ +AY +KSMP + TLL AC ++GD+++ E QIL+LEP +S YVL+S
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 526 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
N+ A RW +V IR +K PG+SL+E+
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 150/293 (51%), Gaps = 18/293 (6%)
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK 191
G++IH +IR G + +L+ LY+ DV A K+F+++ KD V +N ++ G+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
N P EA+ ++ EM + P+ ++L+SA + + + L + +H Y+++ +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR-EN 310
+N ++ YA+CG ++ A+ +F+ M ++ VSWTS+I G +G EAI LF+ ++ E
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 311 LRIDSVTLISLLQALSQLGCLSA-------VKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
L +T + +L A S G + ++E + + R H ++ A+
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH------FGCMVDLLARA 240
Query: 364 GKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
G++ A Y+ + + W +LGA +HG+ L F +++ ++P+
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 10/311 (3%)
Query: 23 LGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSW 82
+ ++ G IH IR GFG + + +LL +Y CG V A VF KM +W
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYV-QNSLLHLYANCGDVASAYKVFDKMPEKDLV--AW 57
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
N +I + NG+ EA L+ +M + + PD T+ + + +CA++ L GK +H YMI+
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 143 MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
+G+ ++ + L+DLY++ V +A+ +F+ + +K++V + ++ G N EAI +
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 202 FHEMIKM-SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI--TRVEIANQIIHT 258
F M + P F+ ++ A S ++ + +R +Y R+E ++
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDL 236
Query: 259 YAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA-IILFRLLQRENLRIDSV 316
A+ G ++ A M + ++V W +++ HG D A ++LQ E
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 317 TLISLLQALSQ 327
L+S + A Q
Sbjct: 297 VLLSNMYASEQ 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + P+ T+VSLL A AK+G+L G+ +H Y I+ G + LLD+Y +CG
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL-TRNLHSSNVLLDLYARCG 138
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLAN 119
V+ A +F +M ++ SW LI NG EA ELF+ M + +LP +T
Sbjct: 139 RVEEAKTLFDEMVDKNSV--SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 196
Query: 120 AILSCAELDYLCHGKSIHGYMIRM----GVEPDMVACTALVDLYSKFDVTKARKMFERLR 175
+ +C+ + G Y RM +EP + +VDL ++ + +K +E ++
Sbjct: 197 ILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFGCMVDLLAR--AGQVKKAYEYIK 251
Query: 176 N 176
+
Sbjct: 252 S 252
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 254/500 (50%), Gaps = 41/500 (8%)
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTAL 155
E F L+ MI +V PD T + + + +L K IH ++I G + +L
Sbjct: 116 ECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSL 172
Query: 156 VDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
V Y + + A K+F R+ + D +NVM+ GY K +EA+ ++ +M+ + P+
Sbjct: 173 VKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDE 232
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQ--YITRVEIANQIIHTYAKC---------- 262
L+L+ L DIRL + +HG++ R Y + + ++N ++ Y KC
Sbjct: 233 YTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAF 292
Query: 263 ---------------------GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI- 300
G ++ A+ VF++M RDLVSW S++ GY G +
Sbjct: 293 DAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVR 352
Query: 301 -ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
+ + + E ++ D VT++SL+ + G LS + VH L R + ++++LI
Sbjct: 353 ELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDM 412
Query: 360 YAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
Y KCG + A +F+ TE+ + W +M+ A HGN + L+LF M+ + P+ +T
Sbjct: 413 YCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTL 472
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV-KSM 478
++LTACSHSGLVEEGL +F M ++ P HY ++DLL RAG++ EA ++V K M
Sbjct: 473 LAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM 532
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVA 538
P S + ++LSACR D E E ++LKLEP YVL+SNI A GRW
Sbjct: 533 PMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSD 592
Query: 539 HIRAMTKDKELKSTPGYSLI 558
R +++ +K T GYS +
Sbjct: 593 KTREAMENRGVKKTAGYSSV 612
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 200/429 (46%), Gaps = 44/429 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M R+ P+R T + L+ A++ L E + IH + I G +L+ Y + G
Sbjct: 124 MIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELG 180
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+A VF +M V S+N +I Y G +LEA +L+ +M+ + PD T+ +
Sbjct: 181 NFGVAEKVFARM--PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSL 238
Query: 121 ILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSK----------FDVTKAR 168
++ C L + GK +HG++ R G +++ AL+D+Y K FD K +
Sbjct: 239 LVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK 298
Query: 169 KM----------------------FERLRNKDAVIYNVMMTGYLKNDLPVEAI-NVFHEM 205
M F+++ +D V +N ++ GY K + +F+EM
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Query: 206 -IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 264
I V P+ ++LIS ++ ++ R +HG V+R Q +++ +I Y KCG
Sbjct: 359 TIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGI 418
Query: 265 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 324
++ A +VF +D+ WTSMITG HG+ +A+ LF +Q E + ++VTL+++L A
Sbjct: 419 IERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
Query: 325 LSQLGCLSAVKEVHCLTYRAF-HGKELSVNNSLITTYAKCGKLNMARYLFQ-QMTERCLT 382
S G + V F E SL+ + G++ A+ + Q +M R
Sbjct: 479 CSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQ 538
Query: 383 S-WNAMLGA 390
S W ++L A
Sbjct: 539 SMWGSILSA 547
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 247/452 (54%), Gaps = 6/452 (1%)
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMF 171
D T + I C + G I ++ G P M L+++Y KF++ A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
+++ ++ + + M++ Y K + +A+ + M++ +V PNV + +++ + + + D+R
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 291
+ +H +++ + V + + +I +AK G + A VF+ M + D + W S+I G+
Sbjct: 180 M---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 351
+ D A+ LF+ ++R + TL S+L+A + L L + H + + ++L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLI 294
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
+NN+L+ Y KCG L A +F QM ER + +W+ M+ A +G E LKLF MK
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
KP+ +T +L ACSH+GL+E+G FRSM + Y I P HY C+IDLL +AG+L +A
Sbjct: 355 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDA 414
Query: 472 YNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEG 531
L+ M + TLL ACR+ + + E AK+++ L+P ++ +Y L+SNI A
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 532 GRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
+WD V IR +D+ +K PG S IE++KQ
Sbjct: 475 QKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 25/290 (8%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T S+L + + + R +H I+ G D + L+D++ K G + A +
Sbjct: 160 PNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLE-SDVFVRSALIDVFAKLGEPEDALS 215
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M V WN +I + N ++ A ELF++M + + TL + + +C L
Sbjct: 216 VFDEMVTGDAIV--WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
L G H ++++ + D++ ALVD+Y K + A ++F +++ +D + ++ M+
Sbjct: 274 ALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD---LRD----IRLARSIHGY 239
+G +N EA+ +F M PN + ++ A S L D R + ++G
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 240 -VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMI 287
+R Y +++ K G L A + N M D V+W +++
Sbjct: 392 DPVREHYGCMIDL-------LGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/578 (30%), Positives = 274/578 (47%), Gaps = 76/578 (13%)
Query: 58 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
K G + A VF M T +WN ++ +Y G EA LF Q+ PD +
Sbjct: 16 KSGRIASARQVFDGMPELDTV--AWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL-- 174
+ +CA L + G+ I +IR G + +L+D+Y K D A K+F +
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 175 --RN-----------------------------KDAVIYNVMMTGYLKNDLPVEAINVFH 203
RN + A +N+M++G+ +++F
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 204 EMIKMSVSPNVALFLNLISAVS-DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK- 261
EM++ P+ F +L++A S D ++ R +H +L++ + + VE N ++ Y K
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 262 ---------------------------C---GYLQYARLVFNRMRSRDLVSWTSMITGYV 291
C G + A VF+ +++V+WT+MITGY
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKEL 350
+G ++A+ F + + + D ++L A S L L K +H CL + F G
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 351 SVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
V N+L+ YAKCG + A F + + L SWN ML A+ +HG + LKL+++M
Sbjct: 374 -VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV-HYNCIIDLLSRAGQLT 469
IKPD +TF +LT CSHSGLVEEG IF SM+++Y I P EV H C+ID+ R G L
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI-PLEVDHVTCMIDMFGRGGHLA 491
Query: 470 EAYNLVKSMPS----THSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 525
EA +L + S + ++++ TLL AC + TE+G ++K + EP S+VL+S
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLS 551
Query: 526 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
N+ GRW E +R ++ +K TPG S IE+ Q
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQ 589
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/527 (23%), Positives = 220/527 (41%), Gaps = 97/527 (18%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGG----- 61
P+ + ++L A LG+++ GR I IR GF C + +L+DMY KC
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF--CASLPVNNSLIDMYGKCSDTLSAN 125
Query: 62 -------------VKMAAAVFGKMNATSTTVG-------------SWNPLIAAYLHNGQA 95
V + +F MNA +WN +I+ + H G+
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 96 LEAFELFRQMIHRKVLPDLLTLANAILSC-AELDYLCHGKSIHGYMIRMGVEPDMVACTA 154
LF++M+ + PD T ++ + +C A+ + +G+ +H M++ G + A +
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 155 LVDLYSKF--------------------------------DVTKARKMFERLRNKDAVIY 182
++ Y+K + KA ++F K+ V +
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
M+TGY +N +A+ F EM+K V + + ++ A S L + + IHG ++
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ + N +++ YAKCG ++ A F + ++DLVSW +M+ + HG D+A+ L
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 303 FRLLQRENLRIDSVTLISLL-----QALSQLGCL---SAVKE---------VHCLTYRAF 345
+ + ++ D+VT I LL L + GC+ S VK+ V C+
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
G L+ L TTY+ + ++ + C T W+ LG ++VLK+
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGR-----EVSKVLKIAE 540
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI-REYTIVPG 451
+E++F + +G +EG + R M+ R PG
Sbjct: 541 -------PSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPG 580
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 40/297 (13%)
Query: 256 IHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDS 315
I + AK G + AR VF+ M D V+W +M+T Y G EAI LF L+ + + D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 316 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG----------- 364
+ ++L + LG + +++ L R+ L VNNSLI Y KC
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 365 ----------------------KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
+ A +F +M +R +WN M+ +A G L
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 403 LFNHMKLGNIKPDELTFTSILTACS-HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
LF M KPD TF+S++ ACS S V G + M++ E N ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK-NSVLSF 249
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 518
++ G +A ++S+ + + +++ AC G+TE A ++ L P +
Sbjct: 250 YTKLGSRDDAMRELESI-EVLTQVSWNSIIDACMKIGETE----KALEVFHLAPEKN 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
S I + AK G++ AR +F M E +WN ML +Y+ G + E + LF ++ + KP
Sbjct: 9 SKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D+ +FT+IL+ C+ G V+ G +I +IR V+ N +ID+ + A +
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVN-NSLIDMYGKCSDTLSANKV 127
Query: 475 VKSM-PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEG 531
+ M + + C+LL A Y + E EA +++ R + ++ NI+ G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAW----NIMISG 178
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 221/395 (55%), Gaps = 1/395 (0%)
Query: 167 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
A +F + + +N M+ GY+ EA+ ++EM++ P+ + L+ A +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 286
L+ IR + IHG V + V + N +I+ Y +CG ++ + VF ++ S+ SW+SM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 287 ITGYVHHGHIDEAIILFRLLQRE-NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
++ G E ++LFR + E NL+ + ++S L A + G L+ +H R
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
+ V SL+ Y KCG L+ A ++FQ+M +R +++AM+ A+HG L++F+
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
M ++PD + + S+L ACSHSGLV+EG ++F M++E + P HY C++DLL RA
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 466 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 525
G L EA ++S+P + T LS CR+ + E+G+ A+++LKL N Y+LIS
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 526 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
N+ ++G WD+VA R K LK TPG+S++EL
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVEL 479
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 132/238 (55%), Gaps = 5/238 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T LL A +L S++EG+ IHG + G D + +L++MY +CG +++++A
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEA-DVFVQNSLINMYGRCGEMELSSA 188
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAE 126
VF K+ S T SW+ +++A G E LFR M L + + +A+L+CA
Sbjct: 189 VFEKLE--SKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACAN 246
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 185
L G SIHG+++R E +++ T+LVD+Y K + KA +F+++ ++ + Y+ M
Sbjct: 247 TGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAM 306
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
++G + A+ +F +MIK + P+ +++++++A S ++ R + +L+
Sbjct: 307 ISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE 364
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
AA++F ++ T +N +I Y++ EA + +M+ R PD T + +C
Sbjct: 85 AASIFRGIDDPCTF--DFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKAC 142
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYN 183
L + GK IHG + ++G+E D+ +L+++Y + ++ + +FE+L +K A ++
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS 202
Query: 184 VMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
M++ + E + +F M + ++ + ++ + A ++ + L SIHG++LR
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIIL 302
+ + + ++ Y KCG L A +F +M R+ +++++MI+G HG + A+ +
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
F + +E L D V +S+L A S G + + V
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 154/304 (50%), Gaps = 15/304 (4%)
Query: 260 AKCGY------LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLR 312
AKC + + YA +F + + +MI GYV+ +EA+ + ++QR N
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN-E 129
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
D+ T LL+A ++L + K++H ++ ++ V NSLI Y +CG++ ++ +
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGL 431
F+++ + SW++M+ A A G ++E L LF M N+K +E S L AC+++G
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 491
+ G+ I ++R + + V + ++D+ + G L +A ++ + M ++ ++
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTS-LVDMYVKCGCLDKALHIFQKM-EKRNNLTYSAMI 307
Query: 492 SACRLYGDTEIGEAIAKQILK--LEPRNSSSYVLISNILAEGGRWDEVAHIRA-MTKDKE 548
S L+G+ E + +++K LEP + YV + N + G E + A M K+ +
Sbjct: 308 SGLALHGEGESALRMFSKMIKEGLEP-DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGK 366
Query: 549 LKST 552
++ T
Sbjct: 367 VEPT 370
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 250/496 (50%), Gaps = 33/496 (6%)
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMV----------ACT 153
Q++ R P T N I C++ L GK +H ++ G P +V C
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 154 ALVDLYSKFD----------------------VTKARKMFERLRNKDAVIYNVMMTGYLK 191
+LVD FD + +ARK+F+ + KD+ + M+TGY+K
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 192 NDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
D P EA+ ++ M ++ S PN+ ++A + ++ IR + IHG+++R +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+ + ++ Y KCG + AR +F+++ +D+VSWTSMI Y E LF L
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
R + T +L A + L K+VH R ++SL+ Y KCG + A+
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
++ + L SW +++G A +G E LK F+ + KPD +TF ++L+AC+H+G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
LVE+GL+ F S+ ++ + HY C++DLL+R+G+ + +++ MP S ++
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 491 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 550
L C YG+ ++ E A+++ K+EP N +YV ++NI A G+W+E +R ++ +
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 551 STPGYSLIELDKQREV 566
PG S E+ ++R V
Sbjct: 555 KRPGSSWTEIKRKRHV 570
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T+ + AAA + ++ G+ IHG+ +R G DE+ ++L+DMY KCG + A
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD-SDEVLWSSLMDMYGKCGCIDEARN 274
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F K+ V SW +I Y + + E F LF +++ P+ T A + +CA+L
Sbjct: 275 IFDKI--VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADL 332
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
GK +HGYM R+G +P A ++LVD+Y+K ++ A+ + + D V + ++
Sbjct: 333 TTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLI 392
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA-RSIHGYVLRHQY 245
G +N P EA+ F ++K P+ F+N++SA + + + +H+
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEA 299
+ ++ A+ G + + V + M + W S++ G +G+ID A
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLA 507
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 241/459 (52%), Gaps = 25/459 (5%)
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL----VDLYSKF-DVTKARKMFERLRNK 177
+C+++ L K +H + +R P+ A L + L S F DV A ++F+ + N
Sbjct: 57 TCSDMSQL---KQLHAFTLRT-TYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 178 DAVIYNVMMTGYLKN-DLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARS 235
+ ++N ++ + EA ++ +M+ + SP+ F ++ A + + +
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
+H +++H + V + N +IH Y CG L AR VF+ M R LVSW SMI V G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH---GKELSV 352
D A+ LFR +QR + D T+ S+L A + LG LS H R ++ V
Sbjct: 233 YDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM--KLG 410
NSLI Y KCG L MA +FQ M +R L SWNAM+ +A HG E + F+ M K
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
N++P+ +TF +L AC+H G V +G Q F M+R+Y I P HY CI+DL++RAG +TE
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 471 AYNLVKSMPSTHSSAALCTLLSACRLYG-DTEIGEAIAKQILKLEPRNSSS-------YV 522
A ++V SMP + +LL AC G E+ E IA+ I+ + N SS YV
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYV 471
Query: 523 LISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
L+S + A RW++V +R + + ++ PG S IE++
Sbjct: 472 LLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 510
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 177/391 (45%), Gaps = 45/391 (11%)
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHN-GQALEAFELFRQMIHR-KVLPDLLTLAN 119
V A VF + S+ + WN LI A H+ + EAF L+R+M+ R + PD T
Sbjct: 99 VNYAFRVFDSIENHSSFM--WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPF 156
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKD 178
+ +CA + GK +H +++ G D+ L+ LY ARK+F+ + +
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V +N M+ ++ A+ +F EM + S P+ +++SA + L + L H
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 239 YVLRHQYIT---RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
++LR + V + N +I Y KCG L+ A VF M+ RDL SW +MI G+ HG
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 296 IDEAIILFRLL--QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
+EA+ F + +REN+R +SVT + LL A + +R F K
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACN---------------HRGFVNKGRQYF 380
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
+ ++ Y E L + ++ A G E + + M + K
Sbjct: 381 DMMVRDYC---------------IEPALEHYGCIVDLIARAGYITEAIDMVMSMPM---K 422
Query: 414 PDELTFTSILTACSHSGL-VEEGLQIFRSMI 443
PD + + S+L AC G VE +I R++I
Sbjct: 423 PDAVIWRSLLDACCKKGASVELSEEIARNII 453
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 141/295 (47%), Gaps = 12/295 (4%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P++ T +L A A + EG+ +H ++ GFG D L+ +Y CG + +A
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLARK 207
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M S SWN +I A + G+ A +LFR+M R PD T+ + + +CA L
Sbjct: 208 VFDEMPERSLV--SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGL 264
Query: 128 DYLCHGKSIHGYMIR---MGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYN 183
L G H +++R + V D++ +L+++Y K + A ++F+ ++ +D +N
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 184 VMMTGYLKNDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
M+ G+ + EA+N F M+ + +V PN F+ L+ A + + R ++
Sbjct: 325 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 384
Query: 242 RHQYI-TRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHG 294
R I +E I+ A+ GY+ A +V + D V W S++ G
Sbjct: 385 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 4 QRLY-PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE------IFETTLLDMY 56
QR + P+ T+ S+L A A LGSL G H + +R+ CD + + +L++MY
Sbjct: 244 QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK----CDVDVAMDVLVKNSLIEMY 299
Query: 57 HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK--VLPDL 114
KCG ++MA VF M + SWN +I + +G+A EA F +M+ ++ V P+
Sbjct: 300 CKCGSLRMAEQVFQGMQKRD--LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 357
Query: 115 LTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFD-VTKARKMFE 172
+T +++C ++ G+ M+R +EP + +VDL ++ +T+A M
Sbjct: 358 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 417
Query: 173 RLRNK-DAVIYNVMMTGYLKNDLPVE 197
+ K DAVI+ ++ K VE
Sbjct: 418 SMPMKPDAVIWRSLLDACCKKGASVE 443
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 267/527 (50%), Gaps = 39/527 (7%)
Query: 14 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 73
V L+ A + GR +H + + G I L+ Y +CG V A VF +M
Sbjct: 20 VELIEANGRDRLFCRGRVLHAHLVTSGIARLTRI-AAKLVTFYVECGKVLDARKVFDEM- 77
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
+ +I A NG E+ + FR+M + D + + + + L G
Sbjct: 78 -PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
K IH +++ E D ++L+D+YSKF +V ARK+F L +D V++N M++GY N
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
EA+N+ +M + + P+V + LIS S +R+ E
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN-------------------EEKV 237
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
++I+ GY D+VSWTS+I+G VH+ ++A F+ + L
Sbjct: 238 SEILELMCLDGY------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLNMAR 370
+S T+I+LL A + L + KE+H Y G E V ++L+ Y KCG ++ A
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIH--GYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
LF++ ++ ++N+M+ YA HG + ++LF+ M+ K D LTFT+ILTACSH+G
Sbjct: 344 ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAG 403
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
L + G +F M +Y IVP HY C++DLL RAG+L EAY ++K+M L
Sbjct: 404 LTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGAL 463
Query: 491 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 537
L+ACR +G+ E+ AK + +LEP NS + +L++++ A G W+ V
Sbjct: 464 LAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 12/300 (4%)
Query: 205 MIKMSVSPN------VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 258
M K+++ P+ + ++ LI A R R +H +++ IA +++
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 259 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 318
Y +CG + AR VF+ M RD+ MI +G+ E++ FR + ++ L++D+ +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 319 ISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
SLL+A L K +HCL + + + + +SLI Y+K G++ AR +F + E
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ L +NAM+ YA + E L L MKL IKPD +T+ ++++ SH E+ +I
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH----SSAALCTLLSAC 494
M + P V + II L Q +A++ K M TH +SA + TLL AC
Sbjct: 241 LELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML-THGLYPNSATIITLLPAC 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKC 59
M LYPN T+++LL A L ++ G+ IHGY++ G D F + LLDMY KC
Sbjct: 279 MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE--DHGFVRSALLDMYGKC 336
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A +F K +T ++N +I Y ++G A +A ELF QM D LT
Sbjct: 337 GFISEAMILFRKTPKKTTV--TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTA 394
Query: 120 AILSCA 125
+ +C+
Sbjct: 395 ILTACS 400
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 239/450 (53%), Gaps = 12/450 (2%)
Query: 116 TLANAILSCA--ELDYLCHGKSIHGYMIRMGVEPD-MVACTALVDLYSKFDVTKARKMFE 172
+L A+ SC EL L H K + R G D +V C L DV A K+F+
Sbjct: 36 SLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCY----LRLGHDVC-AEKLFD 90
Query: 173 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDI 230
+ +D V +N +++GY + V M+ ++ PN FL++ISA
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 290
R IHG V++ + V++ N I+ Y K G L + +F + ++LVSW +MI +
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 291 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT-YRAFHGKE 349
+ +G ++ + F + +R D T +++L++ +G + + +H L + F G +
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270
Query: 350 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
+ +L+ Y+K G+L + +F ++T +W AML AYA HG + +K F M
Sbjct: 271 -CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 410 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 469
I PD +TFT +L ACSHSGLVEEG F +M + Y I P HY+C++DLL R+G L
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 470 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 529
+AY L+K MP SS LL ACR+Y DT++G A+++ +LEPR+ +YV++SNI +
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 530 EGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
G W + + IR + K K L G S IE
Sbjct: 450 ASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 155/315 (49%), Gaps = 5/315 (1%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKV--LPDLLTLANAILSCAELDYLCHGKSIHG 138
SWN LI+ Y G + FE+ +M+ +V P+ +T + I +C G+ IHG
Sbjct: 99 SWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG 158
Query: 139 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 197
+++ GV ++ A ++ Y K D+T + K+FE L K+ V +N M+ +L+N L +
Sbjct: 159 LVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEK 218
Query: 198 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
+ F+ ++ P+ A FL ++ + D+ +RLA+ IHG ++ + I ++
Sbjct: 219 GLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLD 278
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 317
Y+K G L+ + VF+ + S D ++WT+M+ Y HG +AI F L+ + D VT
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 318 LISLLQALSQLGCLSAVKE-VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 376
LL A S G + K ++ R L + ++ + G L A L ++M
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
Query: 377 T-ERCLTSWNAMLGA 390
E W A+LGA
Sbjct: 399 PMEPSSGVWGALLGA 413
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 12/223 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKCGGVKMAA 66
PN VT +S++ A GS +EGR IHG ++ FGV +E+ ++ Y K G + +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMK--FGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNG---QALEAFELFRQMIHRKVLPDLLTLANAILS 123
+F ++ + SWN +I +L NG + L F + R++ H PD T + S
Sbjct: 190 KLFEDLSIKNLV--SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE---PDQATFLAVLRS 244
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIY 182
C ++ + + IHG ++ G + TAL+DLYSK + + +F + + D++ +
Sbjct: 245 CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAW 304
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
M+ Y + +AI F M+ +SP+ F +L++A S
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P++ T +++L + +G ++ + IHG + GF ++ T LLD+Y K G ++ ++
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS-GNKCITTALLDLYSKLGRLEDSST 291
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF ++ TS +W ++AAY +G +A + F M+H + PD +T + + +C+
Sbjct: 292 VFHEI--TSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 128 DYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 161
+ GK M R ++P + + +VDL +
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/562 (28%), Positives = 295/562 (52%), Gaps = 59/562 (10%)
Query: 8 PNR--VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
P R VT ++ KLG ++E R + R + + T ++ Y + + +A
Sbjct: 73 PERDVVTWTHVITGYIKLGDMREARELFDRVDSRK----NVVTWTAMVSGYLRSKQLSIA 128
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M V SWN +I Y +G+ +A ELF +M R ++ ++ A++
Sbjct: 129 EMLFQEM--PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS-WNSMVKALVQRG 185
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNKDAVIYNV 184
+D ++ M R D+V+ TA+VD L V +AR++F+ + ++ + +N
Sbjct: 186 RID---EAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNA 238
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M+TGY +N+ EA +F M + RD ++ +R++
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPE--------------------RDFASWNTMITGFIRNR 278
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF- 303
+ + CG +F+RM ++++SWT+MITGYV + +EA+ +F
Sbjct: 279 EMNKA------------CG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVFS 319
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
++L+ +++ + T +S+L A S L L +++H L ++ H K V ++L+ Y+K
Sbjct: 320 KMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS 379
Query: 364 GKLNMARYLFQQ--MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
G+L AR +F + +R L SWN+M+ YA HG+ E ++++N M+ KP +T+ +
Sbjct: 380 GELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLN 439
Query: 422 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 481
+L ACSH+GLVE+G++ F+ ++R+ ++ E HY C++DL RAG+L + N + +
Sbjct: 440 LLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDAR 499
Query: 482 HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 541
S + +LSAC ++ + I + + K++L+ ++ +YVL+SNI A G+ +E A +R
Sbjct: 500 LSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMR 559
Query: 542 AMTKDKELKSTPGYSLIELDKQ 563
K+K LK PG S +++ KQ
Sbjct: 560 MKMKEKGLKKQPGCSWVKVGKQ 581
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 51/248 (20%)
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 291
L RSI+ R RV +I K G + AR +F+ + RD+V+WT +ITGY+
Sbjct: 33 LVRSIYSSSSR----PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYI 88
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 351
G + EA LF R+DS + +T+ A
Sbjct: 89 KLGDMREARELFD-------RVDS--------------------RKNVVTWTA------- 114
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
+++ Y + +L++A LFQ+M ER + SWN M+ YA G + L+LF+ M N
Sbjct: 115 ----MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
I +++ S++ A G ++E + +F M R V + ++D L++ G++ EA
Sbjct: 171 I----VSWNSMVKALVQRGRIDEAMNLFERMPRRDV-----VSWTAMVDGLAKNGKVDEA 221
Query: 472 YNLVKSMP 479
L MP
Sbjct: 222 RRLFDCMP 229
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
++D + PN T VS+L A + L L EG+ IH I + +EI + LL+MY K G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL-ISKSVHQKNEIVTSALLNMYSKSG 380
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A +F + SWN +IA Y H+G EA E++ QM P +T N
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 121 ILSCAELDYLCHGKSIHGYMIR 142
+ +C+ + G ++R
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVR 462
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 255/517 (49%), Gaps = 43/517 (8%)
Query: 52 LLDMYHKCGGVKMAAAVFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
L+ Y++ G A + KM T V +W +I+ +HNG +A ++FR+M
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 110 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKAR 168
V+P+ +T+ +A+ +C+ L + G +H ++MG D++ +LVD+YSK + AR
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 169 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
K+F+ ++NKD +N M+TGY + +A +F M ++ PN+ +
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW----------- 456
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR-----SRDLVSW 283
N +I Y K G A +F RM R+ +W
Sbjct: 457 ------------------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
+I GY+ +G DEA+ LFR +Q +SVT++SLL A + L V+E+H R
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
+V N+L TYAK G + +R +F M + + +WN+++G Y +HG+Y L L
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
FN MK I P+ T +SI+ A G V+EG ++F S+ +Y I+P H + ++ L
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Query: 464 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 523
RA +L EA ++ M + + L+ CR++GD ++ A+ + LEP N+++ +
Sbjct: 673 RANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESI 732
Query: 524 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
+S I A G + +D LK G S IE+
Sbjct: 733 VSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 234/494 (47%), Gaps = 49/494 (9%)
Query: 10 RVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAV 68
R T + LL + GS+ GR +H R G ++F ET LL MY KCG + A V
Sbjct: 81 RSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKV 137
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F M + +W+ +I AY + E +LFR M+ VLPD + CA
Sbjct: 138 FDSMR--ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMT 187
+ GK IH +I++G+ + +++ +Y+K ++ A K F R+R +D + +N ++
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
Y +N EA+ + EM K +SP + +
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTW------------------------------ 285
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILF 303
N +I Y + G A + +M + D+ +WT+MI+G +H+G +A+ +F
Sbjct: 286 -----NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
R + + ++VT++S + A S L ++ EVH + + ++ V NSL+ Y+KC
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
GKL AR +F + + + +WN+M+ Y G + +LF M+ N++P+ +T+ +++
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH- 482
+ +G E + +F+ M ++ + +N II + G+ EA L + M +
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 483 --SSAALCTLLSAC 494
+S + +LL AC
Sbjct: 521 MPNSVTILSLLPAC 534
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 196/391 (50%), Gaps = 34/391 (8%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN VT++S + A + L + +G +H A++ GF + D + +L+DMY KCG ++ A
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + + V +WN +I Y G +A+ELF +M + P+++T N ++S
Sbjct: 409 VFDSVK--NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW-NTMIS---- 461
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMT 187
GY I+ G E + +DL+ + + K K+ ++ +N+++
Sbjct: 462 ----------GY-IKNGDEGEA------MDLFQRME--KDGKV-----QRNTATWNLIIA 497
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
GY++N EA+ +F +M PN L+L+ A ++L ++ R IHG VLR
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
+ N + TYAK G ++Y+R +F M ++D+++W S+I GYV HG A+ LF ++
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKL 366
+ + + TL S++ A +G + K+V +H L ++++ Y + +L
Sbjct: 618 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 677
Query: 367 NMARYLFQQMTERCLTS-WNAMLGAYAMHGN 396
A Q+M + T W + L +HG+
Sbjct: 678 EEALQFIQEMNIQSETPIWESFLTGCRIHGD 708
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 213/476 (44%), Gaps = 48/476 (10%)
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV--EPDM 149
NG LEA + + + T + SC + + G+ +H R G+ EPD+
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDV 115
Query: 150 VACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
T L+ +Y+K + ARK+F+ +R ++ ++ M+ Y + + E +F M+K
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 268
V P+ LF ++ ++ D+ + IH V++ + + ++N I+ YAKCG L +A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 269 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 328
F RMR RD+++W S++ Y +G +EA+ L + +++E + VT
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW---------- 285
Query: 329 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SW 384
N LI Y + GK + A L Q+M +T +W
Sbjct: 286 -------------------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
AM+ +G + L +F M L + P+ +T S ++ACS ++ +G ++ S+
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAV 379
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 504
+ + + N ++D+ S+ G+L +A + S+ + + C+ + E
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 505 AIAK-QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL-KSTPGYSLI 558
+ Q L P + +IS + G + + + M KD ++ ++T ++LI
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 138/290 (47%), Gaps = 6/290 (2%)
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR-- 248
+N +EA + + + +L L+ + D I L R +H R T
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
V + +++ YAKCG + AR VF+ MR R+L +W++MI Y E LFRL+ +
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 309 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 368
+ + D +LQ + G + A K +H + + L V+NS++ YAKCG+L+
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 369 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
A F++M ER + +WN++L AY +G + E ++L M+ I P +T+ ++ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
G + + + + M + I + +I L G +A ++ + M
Sbjct: 295 LGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ R PN VT++SLL A A L + R IHG +RR + + L D Y K G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAV-KNALTDTYAKSG 573
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ + +F + + + +WN LI Y+ +G A LF QM + + P+ TL++
Sbjct: 574 DIEYSRTIF--LGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 121 ILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSKFDVTKARKMFERLRN-- 176
IL+ + + GK + Y I + P + C+A+V LY + + + F + N
Sbjct: 632 ILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQ 690
Query: 177 KDAVIYNVMMTG---YLKNDLPVEAI-NVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
+ I+ +TG + D+ + A N+F S+ P +++S + L +L
Sbjct: 691 SETPIWESFLTGCRIHGDIDMAIHAAENLF------SLEPENTATESIVSQIYAL-GAKL 743
Query: 233 ARSIHGYVLRHQYITR-------VEIANQIIHTY 259
RS+ G R + + +E+ N +IHT+
Sbjct: 744 GRSLEGNKPRRDNLLKKPLGQSWIEVRN-LIHTF 776
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 273/537 (50%), Gaps = 51/537 (9%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T V +L + SL E + H + ++ G D + L+ K +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGL-FHDTFSASKLVAFAATNPEPKTVSYAHSI 96
Query: 72 MNATSTTVG-SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 130
+N + G + N +I AY ++ A +FR+M+ V PD + + +CA
Sbjct: 97 LNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 156
Query: 131 CHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVMMT 187
G+ IHG I+ G+ D+ LV++Y + F++ ARK+ +R+ +DAV +N +++
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEI--ARKVLDRMPVRDAVSWNSLLS 214
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
YL+ L EA +F EM + +V
Sbjct: 215 AYLEKGLVDEARALFDEMEERNV------------------------------------- 237
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLL 306
E N +I YA G ++ A+ VF+ M RD+VSW +M+T Y H G +E + +F ++L
Sbjct: 238 --ESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKML 295
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCG 364
+ D TL+S+L A + LG LS + VH Y HG E+ + +L+ Y+KCG
Sbjct: 296 DDSTEKPDGFTLVSVLSACASLGSLSQGEWVH--VYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
K++ A +F+ ++R +++WN+++ ++HG + L++F+ M KP+ +TF +L+
Sbjct: 354 KIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
AC+H G++++ ++F M Y + P HY C++DLL R G++ EA LV +P+ +S
Sbjct: 414 ACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEAS 473
Query: 485 AALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 541
L +LL AC+ +G E E IA ++L+L R+SS Y +SN+ A GRW++V R
Sbjct: 474 ILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGR 530
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 181/441 (41%), Gaps = 89/441 (20%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
++P++ + +L A A +EGR IHG I+ G V D E TL+++Y + G ++A
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL-VTDVFVENTLVNVYGRSGYFEIA 194
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
V +M SWN L++AYL G EA LF +M R V
Sbjct: 195 RKVLDRMPVRDAV--SWNSLLSAYLEKGLVDEARALFDEMEERNV--------------E 238
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVM 185
+++ G + G V +A+++F+ + +D V +N M
Sbjct: 239 SWNFMISGYAAAGL------------------------VKEAKEVFDSMPVRDVVSWNAM 274
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
+T Y E + VF++M+ S P+ ++++SA + L + +H Y+ +H
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+A ++ Y+KCG + A VF RD+ +W S+I+ HG +A+ +F
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ E + + +T I +L A + +G
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGM---------------------------------- 420
Query: 365 KLNMARYLFQQMT-----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT- 418
L+ AR LF+ M+ E + + M+ G E +L N I DE +
Sbjct: 421 -LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE-----IPADEASI 474
Query: 419 -FTSILTACSHSGLVEEGLQI 438
S+L AC G +E+ +I
Sbjct: 475 LLESLLGACKRFGQLEQAERI 495
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ D P+ TLVS+L A A LGSL +G +H Y + G + + T L+DMY KCG
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI-EGFLATALVDMYSKCG 353
Query: 61 GVKMAAAVFGKMNATST-TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
+ A VF ATS V +WN +I+ +G +A E+F +M++ P+ +T
Sbjct: 354 KIDKALEVF---RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIG 410
Query: 120 AILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
+ +C + L + + M + VEP + +VDL + + +A ++ +
Sbjct: 411 VLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPAD 470
Query: 178 DAVI 181
+A I
Sbjct: 471 EASI 474
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 238/464 (51%), Gaps = 37/464 (7%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDL-----YSKFDVTKARKMFERLRNKDAVIYNVMMTG 188
K IH M++ G+ D A T + S F + A+ +F+ D ++N+M+ G
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF-LPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
+ +D P ++ ++ M+ S N F +L+ A S+L IH + + Y
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID----------- 297
V N +I++YA G + A L+F+R+ D VSW S+I GYV G +D
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 298 --------------------EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
EA+ LF +Q ++ D+V+L + L A +QLG L K +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 338 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 397
H + + + LI YAKCG++ A +F+ + ++ + +W A++ YA HG+
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC 457
E + F M+ IKP+ +TFT++LTACS++GLVEEG IF SM R+Y + P HY C
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 458 IIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN 517
I+DLL RAG L EA ++ MP ++ LL ACR++ + E+GE I + ++ ++P +
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 518 SSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
YV +NI A +WD+ A R + K++ + PG S I L+
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 168/366 (45%), Gaps = 36/366 (9%)
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF + T + WN +I + + + + L+++M+ + T + + +C
Sbjct: 68 AQIVFDGFDRPDTFL--WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC 125
Query: 125 AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD----------- 163
+ L IH + ++G E D+ A +L++ Y+ FD
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 164 -----VTKARKM------FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
KA KM F ++ K+A+ + M++GY++ D+ EA+ +FHEM V P
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
+ N +SA + L + + IH Y+ + + + +I YAKCG ++ A VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 332
++ + + +WT++I+GY +HGH EAI F +Q+ ++ + +T ++L A S G +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 333 AVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGA 390
K + R ++ K + ++ + G L+ A+ Q+M + W A+L A
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 391 YAMHGN 396
+H N
Sbjct: 426 CRIHKN 431
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 37/323 (11%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHG--------------------YAIRRGFGVC---- 44
N T SLL A + L + +E IH YA+ F +
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 45 ------DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEA 98
D++ +++ Y K G + +A +F KM + SW +I+ Y+ EA
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI--SWTTMISGYVQADMNKEA 231
Query: 99 FELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDL 158
+LF +M + V PD ++LANA+ +CA+L L GK IH Y+ + + D V L+D+
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDM 291
Query: 159 YSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 217
Y+K ++ +A ++F+ ++ K + +++GY + EAI+ F EM KM + PNV F
Sbjct: 292 YAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITF 351
Query: 218 LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFNRM 275
+++A S + + I Y + Y + I + I+ + G L A+ M
Sbjct: 352 TAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 276 RSR-DLVSWTSMITGYVHHGHID 297
+ + V W +++ H +I+
Sbjct: 411 PLKPNAVIWGALLKACRIHKNIE 433
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ+ + P+ V+L + L A A+LG+L++G+ IH Y + + D + L+DMY KCG
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRM-DSVLGCVLIDMYAKCG 296
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF N +V +W LI+ Y ++G EA F +M + P+++T
Sbjct: 297 EMEEALEVFK--NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 121 ILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFDVTKARKMF--ERLRNK 177
+ +C+ + GK I M R ++P + +VDL + + K F E
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKP 414
Query: 178 DAVIYNVMM 186
+AVI+ ++
Sbjct: 415 NAVIWGALL 423
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 265/515 (51%), Gaps = 6/515 (1%)
Query: 51 TLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 110
+LL +Y KCG + A +F +M V S N + +L N + F L ++M+
Sbjct: 95 SLLSLYAKCGKLVDAIKLFDEMPMRD--VISQNIVFYGFLRNRETESGFVLLKRMLGSGG 152
Query: 111 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARK 169
D TL + C ++ K IH I G + ++ L+ Y K + R
Sbjct: 153 F-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
+F+ + +++ + +++G ++N+L + + +F M + V PN +L+ ++A S +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
I + IH + ++ + + I + ++ Y+KCG ++ A +F D VS T ++ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY-RAFHGK 348
+G +EAI F + + + ID+ + ++L L K++H L R F G
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
VNN LI Y+KCG L ++ +F++M +R SWN+M+ A+A HG+ LKL+ M
Sbjct: 392 TF-VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
+KP ++TF S+L ACSH GL+++G ++ M + I P HY CIID+L RAG L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 469 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 528
EA + + S+P LL AC +GDTE+GE A+Q+ + P +SS+++LI+NI
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIY 570
Query: 529 AEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
+ G+W E A K + G S IE++ +
Sbjct: 571 SSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHK 605
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 155/330 (46%), Gaps = 31/330 (9%)
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALF--------------------- 217
V++N +++ Y K V+AI +F EM ++ +S N+ +
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 218 -------LNLISAVSDLRDIRL-ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
L ++ +V D + L + IH + Y + + N++I +Y KCG R
Sbjct: 151 GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 270 LVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
VF+ M R++++ T++I+G + + ++ + LF L++R + +SVT +S L A S
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
+ +++H L ++ EL + ++L+ Y+KCG + A +F+ TE S +L
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
A +G+ E ++ F M ++ D +++L + G Q+ S++ +
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL-HSLVIKRKFS 389
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
N +I++ S+ G LT++ + + MP
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 10/299 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKC 59
M+ ++PN VT +S L A + + EG+ IH A+ +G+ E+ E+ L+DMY KC
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIH--ALLWKYGIESELCIESALMDMYSKC 304
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G ++ A +F + T S ++ NG EA + F +M+ V D + +
Sbjct: 305 GSIEDAWTIF--ESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEID-ANVVS 361
Query: 120 AILSCAELD-YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
A+L + +D L GK +H +I+ + L+++YSK D+T ++ +F R+ +
Sbjct: 362 AVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKR 421
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
+ V +N M+ + ++ + A+ ++ EM + V P FL+L+ A S + I R +
Sbjct: 422 NYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELL 481
Query: 238 GYVLR-HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHG 294
+ H R E II + G L+ A+ + + + D W +++ HG
Sbjct: 482 NEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 266/530 (50%), Gaps = 39/530 (7%)
Query: 29 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 88
G+ IH A+R GFG D +LL++Y K + A +F +M V SWN +I
Sbjct: 268 GKQIHCLALRLGFGG-DLHLNNSLLEIYAKNKDMNGAELIFAEM--PEVNVVSWNIMIVG 324
Query: 89 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 148
+ ++ ++ E +M P+ +T + + +C R G
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC----------------FRSG---- 364
Query: 149 MVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
DV R++F + +N M++GY + EAI+ F +M
Sbjct: 365 --------------DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 268
++ P+ ++S+ + LR + + IHG V+R + I + +I Y++C ++ +
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEIS 470
Query: 269 RLVFNR-MRSRDLVSWTSMITGYVHHGHIDEAIILFRLL-QRENLRIDSVTLISLLQALS 326
+F+ + D+ W SMI+G+ H+ +A+ILFR + Q L + + ++L + S
Sbjct: 471 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNA 386
+L L ++ H L ++ + + V +L Y KCG+++ AR F + + WN
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 387 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 446
M+ Y +G E + L+ M KPD +TF S+LTACSHSGLVE GL+I SM R +
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAI 506
I P HY CI+D L RAG+L +A L ++ P SS LLS+CR++GD + +
Sbjct: 651 GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRV 710
Query: 507 AKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
A+++++L+P++S++YVL+SN + +WD+ A ++ + + TPG S
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 208/442 (47%), Gaps = 52/442 (11%)
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKF------------------------------ 162
GK IHG+++RMG++ D C L+DLY +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 163 --DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
D+ +A ++F+ + +D V +N M++ ++ +A+ V+ M+ P+ ++
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL-QYARLVFNRMRSRD 279
+SA S + D HG ++ + + N ++ YAKCG++ Y VF + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 280 LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ-ALSQLGC--LSAV-- 334
VS+T++I G + EA+ +FRL+ + +++DSV L ++L + + GC LS +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 335 ----KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
K++HCL R G +L +NNSL+ YAK +N A +F +M E + SWN M+
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
+ + ++ M+ +P+E+T S+L AC SG VE G +IF S+ + P
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----P 379
Query: 451 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH---SSAALCTLLSACRLYGDTEIGEAIA 507
+N ++ S EA + + M + L +LS+C E G+ I
Sbjct: 380 SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIH 439
Query: 508 KQILKLEPRNSSSYVLISNILA 529
+++ E +S ++S ++A
Sbjct: 440 GVVIRTEISKNSH--IVSGLIA 459
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 199/456 (43%), Gaps = 76/456 (16%)
Query: 29 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATST----------- 77
G+ IHG+ +R G D LLD+Y +CG A VF +M+
Sbjct: 25 GKVIHGFIVRMGMKS-DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 78 ------------------TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
V SWN +I+ + G +A ++++M+ LP TLA+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK--FDVTKARKMFERLRNK 177
+ +C+++ G HG ++ G++ ++ AL+ +Y+K F V ++FE L
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS---------AVSDLR 228
+ V Y ++ G + + +EA+ +F M + V + N++S ++S++
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
L + IH LR + + + N ++ YAK + A L+F M ++VSW MI
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
G+ D+++ ++ + + VT IS+L A +R+
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA----------------CFRS---- 363
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
G + R +F + + +++WNAML Y+ + +Y E + F M+
Sbjct: 364 ---------------GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
N+KPD+ T + IL++C+ +E G QI +IR
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/596 (23%), Positives = 251/596 (42%), Gaps = 102/596 (17%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGG-VKMA 65
P+R TL S+L A +K+ G HG A++ G IF LL MY KCG V
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLD--KNIFVGNALLSMYAKCGFIVDYG 193
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
VF ++ + S+ +I + LEA ++FR M + V D + L+N ILS +
Sbjct: 194 VRVFESLSQPNEV--SYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSN-ILSIS 250
Query: 126 ELDYLCH----------GKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 174
C GK IH +R+G D+ +L+++Y+K D+ A +F +
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
+ V +N+M+ G+ + +++ M PN ++++ A
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC---------- 360
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 294
+ G ++ R +F+ + + +W +M++GY ++
Sbjct: 361 -------------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 295 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 354
H +EAI FR +Q +NL+ D TL +L + ++L L K++H + R K + +
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 355 SLITTYAKCGKLNMARYLFQQ-MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNI 412
LI Y++C K+ ++ +F + E + WN+M+ + + + L LF M + +
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 413 KPDELTFTSILTACSH-----------------------------------SGLVEEGLQ 437
P+E +F ++L++CS G ++ Q
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQ 575
Query: 438 IFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA---ALCTLLSAC 494
F +++R+ T++ +N +I G+ EA L + M S+ ++L+AC
Sbjct: 576 FFDAVLRKNTVI-----WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTAC 630
Query: 495 RLYGDTEIGEAI---AKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 547
G E G I ++I +EP Y+ I + L GR ++ + T K
Sbjct: 631 SHSGLVETGLEILSSMQRIHGIEPE-LDHYICIVDCLGRAGRLEDAEKLAEATPYK 685
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
Q L PN + ++L + ++L SL GR HG ++ G+ V D ET L DMY KCG
Sbjct: 511 QTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDSFVETALTDMYCKCGE 569
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
+ A F + +T + WN +I Y HNG+ EA L+R+MI PD +T + +
Sbjct: 570 IDSARQFFDAVLRKNTVI--WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 627
Query: 122 LSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-D 178
+C+ + G I M R+ G+EP++ +VD + + A K+ E K
Sbjct: 628 TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 687
Query: 179 AVIYNVMMT 187
+V++ ++++
Sbjct: 688 SVLWEILLS 696
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 318 LISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT 377
L SLL+ C + K +H R + + N L+ Y +CG + AR +F +M+
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 378 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 437
R + SWNA L G+ E ++F+ M + D +++ ++++ G E+ L
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMP----ERDVVSWNNMISVLVRKGFEEKALV 124
Query: 438 IFRSMI 443
+++ M+
Sbjct: 125 VYKRMV 130
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 236/431 (54%), Gaps = 3/431 (0%)
Query: 134 KSIHGYMIRMGV-EPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
K IH ++R G E + + L +L D+ AR++F+ + ++N + GY++N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
LP E++ ++ +M + V P+ + ++ A+S L D ++H +V+++ + +A
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
+++ Y K G L A +F M+ +DLV+W + + V G+ A+ F + + ++
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
DS T++S+L A QLG L +E++ + + V N+ + + KCG AR L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 432
F++M +R + SW+ M+ YAM+G+ E L LF M+ ++P+ +TF +L+ACSH+GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 433 EEGLQIFRSMIR--EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
EG + F M++ + + P + HY C++DLL R+G L EAY +K MP + L
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 491 LSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELK 550
L AC ++ D +G+ +A +++ P S +VL+SNI A G+WD V +R+ + K
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 551 STPGYSLIELD 561
YS +E +
Sbjct: 448 KVAAYSSVEFE 458
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 12/372 (3%)
Query: 30 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 89
+ IH +R GF + + T LL+ G + A VF +M+ + WN L Y
Sbjct: 28 KKIHAIVLRTGFSEKNSLL-TQLLENLVVIGDMCYARQVFDEMHKPRIFL--WNTLFKGY 84
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL-DYLCHGKSIHGYMIRMGVEPD 148
+ N E+ L+++M V PD T + + ++L D+ C G ++H ++++ G
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC-GFALHAHVVKYGFGCL 143
Query: 149 MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 207
+ T LV +Y KF +++ A +FE ++ KD V +N + ++ A+ F++M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 208 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQY 267
+V + ++++SA L + + I+ + + + + N + + KCG +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
AR++F M+ R++VSW++MI GY +G EA+ LF +Q E LR + VT + +L A S
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNS----LITTYAKCGKLNMARYLFQQMTERCLTS 383
G ++ K L ++ + K L ++ + G L A ++M T
Sbjct: 324 AGLVNEGKRYFSLMVQS-NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 384 -WNAMLGAYAMH 394
W A+LGA A+H
Sbjct: 383 IWGALLGACAVH 394
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 4/226 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+D + P+ T ++ A ++LG G A+H + ++ GFG C I T L+ MY K G
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG-CLGIVATELVMMYMKFG 158
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A +F M +WN +A + G + A E F +M V D T+ +
Sbjct: 159 ELSSAEFLFESMQVKDLV--AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSM 216
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDA 179
+ +C +L L G+ I+ + ++ +++ A +D++ K T+ AR +FE ++ ++
Sbjct: 217 LSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNV 276
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
V ++ M+ GY N EA+ +F M + PN FL ++SA S
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 227/398 (57%), Gaps = 1/398 (0%)
Query: 163 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
D+ ARK+F+ + ++ +N M+ G ++ + E +++F EM + SP+ ++ S
Sbjct: 40 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 99
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
+ LR + + + IHGY +++ + + + + H Y + G LQ +V M R+LV+
Sbjct: 100 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 159
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
W ++I G +G + + L+++++ R + +T +++L + S L +++H
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
+ ++V +SLI+ Y+KCG L A F + + W++M+ AY HG E ++
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 403 LFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
LFN M + N++ +E+ F ++L ACSHSGL ++GL++F M+ +Y PG HY C++DL
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 521
L RAG L +A +++SMP TLLSAC ++ + E+ + + K+IL+++P +S+ Y
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 399
Query: 522 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
VL++N+ A RW +V+ +R +DK +K G S E
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 183/392 (46%), Gaps = 13/392 (3%)
Query: 21 AKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG 80
+KLG A++G ++ + + L++ Y + G + A VF +M T
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNY-----MSSNILINGYVRAGDLVNARKVFDEMPDRKLT-- 57
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
+WN +IA + E LFR+M PD TL + A L + G+ IHGY
Sbjct: 58 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 117
Query: 141 IRMGVEPDMVACTALVDLYSKFDVTKARKMFER-LRNKDAVIYNVMMTGYLKNDLPVEAI 199
I+ G+E D+V ++L +Y + + ++ R + ++ V +N ++ G +N P E +
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCP-ETV 176
Query: 200 NVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 258
++M+K+S PN F+ ++S+ SDL + IH ++ + V + + +I
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 236
Query: 259 YAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL-QRENLRIDSVT 317
Y+KCG L A F+ D V W+SMI+ Y HG DEAI LF + ++ N+ I+ V
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 318 LISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQM 376
++LL A S G E+ + + K L ++ + G L+ A + + M
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 377 TERC-LTSWNAMLGAYAMHGNYAEVLKLFNHM 407
+ + W +L A +H N ++F +
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
+S S L D A +++G + + Y++ +N +I+ Y + G L AR VF+ M R L
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKL 56
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
+W +MI G + +E + LFR + D TL S+ + L +S +++H
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
T + +L VN+SL Y + GKL + + M R L +WN ++ A +G V
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
L L+ MK+ +P+++TF ++L++CS + +G QI I+
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 13/312 (4%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ TL S+ +A L S+ G+ IHGY I+ G + D + ++L MY + G ++
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL-DLVVNSSLAHMYMRNGKLQDGEI 147
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
V M + +WN LI NG L++ M P+ +T + SC++L
Sbjct: 148 VIRSMPVRNLV--AWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMM 186
G+ IH I++G + ++L+ +YSK + A K F ++D V+++ M+
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265
Query: 187 TGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAV--SDLRDIRLARSIHGYVLRH 243
+ Y + EAI +F+ M + + + N FLNL+ A S L+D L V ++
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL-ELFDMMVEKY 324
Query: 244 QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIIL 302
+ ++ ++ + G L A + M + D+V W ++++ H + + A +
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 303 FRLLQRENLRID 314
F +E L+ID
Sbjct: 385 F----KEILQID 392
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 236/474 (49%), Gaps = 75/474 (15%)
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
NG +AF L+ Q++ ++ P+ T ++ + SC+ GK IH ++++ G+ D
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYV 163
Query: 152 CTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 211
T LVD+ Y K V A VF M + S+
Sbjct: 164 ATGLVDV------------------------------YAKGGDVVSAQKVFDRMPERSLV 193
Query: 212 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 271
+ A+ I YAK G ++ AR +
Sbjct: 194 SSTAM---------------------------------------ITCYAKQGNVEAARAL 214
Query: 272 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGC 330
F+ M RD+VSW MI GY HG ++A++LF +LL + D +T+++ L A SQ+G
Sbjct: 215 FDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
L + +H + + V LI Y+KCG L A +F + + +WNAM+
Sbjct: 275 LETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334
Query: 391 YAMHGNYAEVLKLFNHMK-LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
YAMHG + L+LFN M+ + ++P ++TF L AC+H+GLV EG++IF SM +EY I
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 509
P HY C++ LL RAGQL AY +K+M S ++L +C+L+GD +G+ IA+
Sbjct: 395 PKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEY 454
Query: 510 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
++ L +NS YVL+SNI A G ++ VA +R + K+K + PG S IE++ +
Sbjct: 455 LIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENK 508
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 144/325 (44%), Gaps = 47/325 (14%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T SLL + S + G+ IH + ++ G G+ D T L+D+Y K G V A
Sbjct: 128 PNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGI-DPYVATGLVDVYAKGGDVVSAQK 182
Query: 68 VFGKMNATSTT-----------------------------VGSWNPLIAAYLHNGQALEA 98
VF +M S + SWN +I Y +G +A
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 99 FELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 157
LF++++ K PD +T+ A+ +C+++ L G+ IH ++ + ++ CT L+D
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 158 LYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVA 215
+YSK + +A +F KD V +N M+ GY + +A+ +F+EM ++ + P
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 216 LFLNLISAVSDL----RDIRLARSI-HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
F+ + A + IR+ S+ Y ++ ++E ++ + G L+ A
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIK----PKIEHYGCLVSLLGRAGQLKRAYE 418
Query: 271 VFNRMR-SRDLVSWTSMITGYVHHG 294
M D V W+S++ HG
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCKLHG 443
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 218/400 (54%), Gaps = 10/400 (2%)
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ A K+F + K+ V++ M+ GYL N V A F +S ++ L+ +IS
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD----LSPERDIVLWNTMISG 99
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
++ ++ ARS+ + ++ N ++ YA G ++ VF+ M R++ SW
Sbjct: 100 YIEMGNMLEARSLFDQMPCRDVMS----WNTVLEGYANIGDMEACERVFDDMPERNVFSW 155
Query: 284 TSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
+I GY +G + E + F R++ ++ + T+ +L A ++LG K VH
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 343 RAFHGK-ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
+ K +++V N+LI Y KCG + +A +F+ + R L SWN M+ A HG+ E L
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
LF+ MK I PD++TF +L AC H GLVE+GL F SM +++I+P H C++DL
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDL 335
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 521
LSRAG LT+A + MP + TLL A ++Y +IGE ++++KLEPRN +++
Sbjct: 336 LSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANF 395
Query: 522 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
V++SNI + GR+D+ A ++ +D K G S IE D
Sbjct: 396 VMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETD 435
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 137/299 (45%), Gaps = 14/299 (4%)
Query: 6 LYPNR--VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 63
L P R V +++ ++G++ E R++ R D + T+L+ Y G ++
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR-----DVMSWNTVLEGYANIGDME 138
Query: 64 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAIL 122
VF M V SWN LI Y NG+ E F++M+ V+P+ T+ +
Sbjct: 139 ACERVFDDM--PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEP-DMVACTALVDLYSKFDVTK-ARKMFERLRNKDAV 180
+CA+L GK +H Y +G D+ AL+D+Y K + A ++F+ ++ +D +
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS-IHGY 239
+N M+ G + EA+N+FHEM +SP+ F+ ++ A + + + +
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHID 297
+ +E ++ ++ G+L A N+M + D V W +++ + +D
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD 375
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T+ +L A AKLG+ G+ +H Y G+ D + L+DMY KCG +++A
Sbjct: 186 PNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME 245
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + SWN +I +G EA LF +M + + PD +T + +C +
Sbjct: 246 VFKGIKRRDLI--SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Query: 128 DYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNV 184
+ G + M + P++ C +VDL S+ +T+A + ++ K DAVI+
Sbjct: 304 GLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 363
Query: 185 MMTG---YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
++ Y K D+ A+ E+IK+ N A F+ L + D
Sbjct: 364 LLGASKVYKKVDIGEVAL---EELIKLE-PRNPANFVMLSNIYGD 404
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 56/324 (17%)
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC--GYLQYARLVFNRMRSRDLV 281
++ LRD L + ++ H + E NQ+ C G + A VF M +++V
Sbjct: 2 ITSLRDSSLLVAESRELITHAKCS-TESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVV 60
Query: 282 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 341
WTSMI GY+ + + A F L ++ + + + ++ + L S ++ C
Sbjct: 61 LWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPC-- 118
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
+++ N+++ YA G + +F M ER + SWN ++ YA +G +EVL
Sbjct: 119 ------RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVL 172
Query: 402 KLFNHM-KLGNIKPDELTFTSILTACS--------------------------------- 427
F M G++ P++ T T +L+AC+
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALID 232
Query: 428 ---HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSS 484
G +E +++F+ + R I +N +I+ L+ G TEA NL M ++ S
Sbjct: 233 MYGKCGAIEIAMEVFKGIKRRDLI-----SWNTMINGLAAHGHGTEALNLFHEMKNSGIS 287
Query: 485 AALCT---LLSACRLYGDTEIGEA 505
T +L AC+ G E G A
Sbjct: 288 PDKVTFVGVLCACKHMGLVEDGLA 311
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 253/480 (52%), Gaps = 55/480 (11%)
Query: 136 IHGYMIRMGVEPDMVACTALV------DLYSKFDVTKARKMFERLRNKDAVIYNVMMTGY 189
IH I+ G D +A ++ DL+ + D+ A K+F ++ ++ +N ++ G+
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHR-DLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 190 LKND--LPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
++D + AI +F+EM+ V PN F +++ A + I+ + IHG L++ +
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 247 TRVEIANQIIHTYAKCGYLQ---------------------------------------- 266
+ + ++ Y CG+++
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 267 -----YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 321
AR++F++MR R +VSW +MI+GY +G +A+ +FR +++ ++R + VTL+S+
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 322 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL 381
L A+S+LG L + +H + + + ++LI Y+KCG + A ++F+++ +
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 382 TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 441
+W+AM+ +A+HG + + F M+ ++P ++ + ++LTACSH GLVEEG + F
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 442 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 501
M+ + P HY C++DLL R+G L EA + +MP LL ACR+ G+ E
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Query: 502 IGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+G+ +A ++ + P +S +YV +SN+ A G W EV+ +R K+K+++ PG SLI++D
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 182/439 (41%), Gaps = 96/439 (21%)
Query: 54 DMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ--ALEAFELFRQMIHRK-V 110
D++H+ + A +F +M SWN +I + + + AL A LF +M+ + V
Sbjct: 69 DLHHR--DLDYAHKIFNQM--PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFV 124
Query: 111 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG-------------------------- 144
P+ T + + +CA+ + GK IHG ++ G
Sbjct: 125 EPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARV 184
Query: 145 ------VEPDMVACT-------------ALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
+E DMV T ++D Y + D AR +F+++R + V +N
Sbjct: 185 LFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNT 244
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
M++GY N +A+ VF EM K + PN ++++ A+S L + L +H Y
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+ + +I Y+KCG ++ A VF R+ ++++W++MI G+ HG +AI F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+++ +R V I+LL A S HG G
Sbjct: 365 KMRQAGVRPSDVAYINLLTACS-------------------HG----------------G 389
Query: 365 KLNMARYLFQQMT-----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
+ R F QM E + + M+ G E + +M IKPD++ +
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---IKPDDVIW 446
Query: 420 TSILTACSHSGLVEEGLQI 438
++L AC G VE G ++
Sbjct: 447 KALLGACRMQGNVEMGKRV 465
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 173/383 (45%), Gaps = 48/383 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D+ + PNR T S+L A AK G +QEG+ IHG A++ GFG DE + L+ MY CG
Sbjct: 119 MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG-GDEFVMSNLVRMYVMCG 177
Query: 61 GVKMAAAVF-----------------------------------GKMNAT--------ST 77
+K A +F G A
Sbjct: 178 FMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQR 237
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 137
+V SWN +I+ Y NG +A E+FR+M + P+ +TL + + + + L L G+ +H
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 138 GYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 196
Y G+ D V +AL+D+YSK + KA +FERL ++ + ++ M+ G+ +
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG 357
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQI 255
+AI+ F +M + V P+ ++NL++A S + R ++ + R+E +
Sbjct: 358 DAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCM 417
Query: 256 IHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 314
+ + G L A + N D V W +++ G+++ + +L + + D
Sbjct: 418 VDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILM-DMVPHD 476
Query: 315 SVTLISLLQALSQLGCLSAVKEV 337
S ++L + G S V E+
Sbjct: 477 SGAYVALSNMYASQGNWSEVSEM 499
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 164/408 (40%), Gaps = 95/408 (23%)
Query: 220 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY----LQYARLVFNRM 275
L +++ R IR IH ++ + A +I+ A L YA +FN+M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 276 RSRDLVSWTSMITGYVHHGHIDEAII----LFRLLQRENLRIDSVTLISLLQALSQLGCL 331
R+ SW ++I G+ D+A+I + ++ E + + T S+L+A ++ G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 332 SAVKEVHCLTYR-AFHGKELSVNNSLITTYAKCGKLNMARY------------------- 371
K++H L + F G E ++N L+ Y CG + AR
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSN-LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 372 --------------------------LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
LF +M +R + SWN M+ Y+++G + + +++F
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
MK G+I+P+ +T S+L A S G +E G + + I +V + +ID+ S+
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 466 GQLTEAYNLVKSMPSTH----------------------------------SSAALCTLL 491
G + +A ++ + +P + S A LL
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 492 SACRLYGDTEIGEAIAKQILK---LEPRNSSSYVLISNILAEGGRWDE 536
+AC G E G Q++ LEPR Y + ++L G DE
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPR-IEHYGCMVDLLGRSGLLDE 429
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 274/558 (49%), Gaps = 6/558 (1%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAI--RRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFG 70
L LL A L+ G +IH + I + D +L+++Y KC A +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 71 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDY 129
M V SW ++ Y ++G E +LF+ M + P+ SC+
Sbjct: 94 LM--PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 130 LCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLRNKDAVIYNVMMTG 188
+ GK HG ++ G+ LV +YS +A ++ + L D +++ ++G
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
YL+ E ++V + N +L+ + S+LRD+ LA +H ++R +
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
VE +I+ Y KCG + YA+ VF+ ++++ T+++ Y +EA+ LF +
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 309 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNM 368
+ + + T LL ++++L L +H L ++ + + V N+L+ YAK G +
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 369 ARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
AR F MT R + +WN M+ + HG E L+ F+ M P+ +TF +L ACSH
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC 488
G VE+GL F +++++ + P HY CI+ LLS+AG +A + +++ P A
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 489 TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKE 548
TLL+AC + + +G+ +A+ ++ P +S YVL+SNI A+ W+ VA +R++ ++
Sbjct: 512 TLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRG 571
Query: 549 LKSTPGYSLIELDKQREV 566
+K PG S I + Q V
Sbjct: 572 VKKEPGVSWIGIRNQTHV 589
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 161/323 (49%), Gaps = 4/323 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN + + + G ++EG+ HG ++ G + E TL+ MY C G A
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGL-ISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
V + +V ++ ++ YL G E ++ R+ + + + LT +++ + L
Sbjct: 193 VLDDLPYCDLSV--FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
L +H M+R G ++ AC AL+++Y K V A+++F+ ++ + +M
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
Y ++ EA+N+F +M V PN F L++++++L ++ +HG VL+ Y
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
V + N +++ YAK G ++ AR F+ M RD+V+W +MI+G HHG EA+ F +
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 307 QRENLRIDSVTLISLLQALSQLG 329
+ +T I +LQA S +G
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIG 453
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 4/174 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + PN T LL++ A+L L++G +HG ++ G+ + L++MY K G
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR-NHVMVGNALVNMYAKSG 387
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A F M T + +WN +I+ H+G EA E F +MI +P+ +T
Sbjct: 388 SIEDARKAFSGM--TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 121 ILSCAELDYLCHG-KSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFER 173
+ +C+ + ++ G + M + V+PD+ T +V L SK + K + F R
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR 499
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 250/439 (56%), Gaps = 10/439 (2%)
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLR 175
A+ + +C L + HG +H + + ++ + LV LY+ + A ++F+R+
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 176 NKDA--VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+D+ +N +++GY + +A+ ++ +M + V P+ F ++ A + +++
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
+IH +++ + V + N ++ YAKCG + AR VF+ + +D VSW SM+TGY+HH
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
G + EA+ +FRL+ + + D V + S+ L+++ +++H R ELSV
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSV---LARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
N+LI Y+K G+L A ++F QM ER SWNA++ A++ + N LK F M N K
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAK 388
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 473
PD +TF S+L+ C+++G+VE+G ++F M +EY I P HY C+++L RAG + EAY+
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 474 L-VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGG 532
+ V+ M LL AC L+G+T+IGE A+++ +LEP N ++ L+ I ++
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 533 RWDEVAHIRAMTKDKELKS 551
R ++V +R M D+ L++
Sbjct: 509 RAEDVERVRQMMVDRGLET 527
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 194/392 (49%), Gaps = 19/392 (4%)
Query: 13 LVSLLHAAAKLGSLQEGRAIH----GYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
SLL L ++ G +H Y +R G+ + L+ +Y CG ++A V
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS-----SKLVRLYASCGYAEVAHEV 149
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F +M+ ++ +WN LI+ Y GQ +A L+ QM V PD T + +C +
Sbjct: 150 FDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMT 187
+ G++IH +++ G D+ ALV +Y+K D+ KAR +F+ + +KD V +N M+T
Sbjct: 210 SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLT 269
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
GYL + L EA+++F M++ + P+ ++++ V + R +HG+V+R
Sbjct: 270 GYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEW 326
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ 307
+ +AN +I Y+K G L A +F++M RD VSW ++I+ H + F +
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMH 383
Query: 308 RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKL 366
R N + D +T +S+L + G + + + L + + ++ ++ Y + G +
Sbjct: 384 RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 367 NMA-RYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
A + Q+M E T W A+L A +HGN
Sbjct: 444 EEAYSMIVQEMGLEAGPTVWGALLYACYLHGN 475
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 12/261 (4%)
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 275
+F +L+ LR I +H + + + I+++++ YA CGY + A VF+RM
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 276 RSRD--LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 333
RD +W S+I+GY G ++A+ L+ + + ++ D T +L+A +G +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
+ +H + G ++ V N+L+ YAKCG + AR +F + + SWN+ML Y
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILT---ACSHSGLVEEGLQIFRSMIREYTIVP 450
HG E L +F M I+PD++ +S+L + H G G I R M E ++
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH-GRQLHGWVIRRGMEWELSVA- 331
Query: 451 GEVHYNCIIDLLSRAGQLTEA 471
N +I L S+ GQL +A
Sbjct: 332 -----NALIVLYSKRGQLGQA 347
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 10/223 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + P+R T +L A +GS+Q G AIH ++ GFG D L+ MY KCG
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY-DVYVLNALVVMYAKCG 244
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF + SWN ++ YLH+G EA ++FR M+ + PD + +++
Sbjct: 245 DIVKARNVFDMIPHKDYV--SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDA 179
+ A + HG+ +HG++IR G+E ++ AL+ LYSK + +A +F+++ +D
Sbjct: 303 L---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDT 359
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
V +N +++ + KN + F +M + + P+ F++++S
Sbjct: 360 VSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLS 399
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 258/478 (53%), Gaps = 19/478 (3%)
Query: 92 NGQALEAFELFRQMIHRKVLPDLL--TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 149
+G + LF Q IHR PDL T + +C+ L Y G+ +H MI+ G E
Sbjct: 62 SGNPNDTLALFLQ-IHRAS-PDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGT 119
Query: 150 VACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
++ TAL+D+YSK+ + + ++FE + KD V +N +++G+L+N EA+ VF M +
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 268
V + +++ + L+ ++ + +H V+ V + +I Y+ G + A
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEA 238
Query: 269 RLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
V+N + D V S+I+G + + + EA +L QR N+R+ L S L S
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-QRPNVRV----LSSSLAGCSD 293
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 387
L K++HC+ R + + N L+ Y KCG++ AR +F+ + + + SW +M
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 388 LGAYAMHGNYAEVLKLFNHM--KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
+ AYA++G+ + L++F M + + P+ +TF +++AC+H+GLV+EG + F M +
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Query: 446 YTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL----LSACRLYGDTE 501
Y +VPG HY C ID+LS+AG+ E + LV+ M + + C + LSAC L D
Sbjct: 414 YRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLT 473
Query: 502 IGEAIAKQIL-KLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
GE +A++++ + P N+S YVL+SN A G+WD V +R K+K L T G+SL
Sbjct: 474 RGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSLF 531
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 198/408 (48%), Gaps = 25/408 (6%)
Query: 1 MQDQRLYPNRV--TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHK 58
+Q R P+ T +L A + L + GR +H I++G I +T L+DMY K
Sbjct: 73 LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQG-AETGTISKTALIDMYSK 131
Query: 59 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
G + + VF + SWN L++ +L NG+ EA +F M +V TL+
Sbjct: 132 YGHLVDSVRVFESVEEKDLV--SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLS 189
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-N 176
+ + +CA L L GK +H ++ G + +V TA++ YS + +A K++ L +
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVH 248
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
D V+ N +++G ++N EA ++ PNV + + ++ SD D+ + + I
Sbjct: 249 TDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQI 303
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H LR+ +++ ++ N ++ Y KCG + AR +F + S+ +VSWTSMI Y +G
Sbjct: 304 HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDG 363
Query: 297 DEAIILFRLLQRENLRI--DSVTLISLLQALSQLGCLSAVKEVHCL---TYRAFHGKELS 351
+A+ +FR + E + +SVT + ++ A + G + KE + YR G E
Sbjct: 364 VKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTS-----WNAMLGAYAMH 394
V I +K G+ L ++M E S W A+L A +++
Sbjct: 424 V--CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 189/398 (47%), Gaps = 21/398 (5%)
Query: 165 TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 224
T A +F+ L +D N ++ +L++ P + + +F ++ + S + F ++ A
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGAC 94
Query: 225 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 284
S L R +H +++ T +I Y+K G+L + VF + +DLVSW
Sbjct: 95 SLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWN 154
Query: 285 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 344
++++G++ +G EA+ +F + RE + I TL S+++ + L L K+VH +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV--V 212
Query: 345 FHGKELSV-NNSLITTYAKCGKLNMARYLFQQM---TERCLTSWNAMLGAYAMHGNYAEV 400
G++L V ++I+ Y+ G +N A ++ + T+ + N+++ + NY E
Sbjct: 213 VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML--NSLISGCIRNRNYKEA 270
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
L + +P+ +S L CS + + G QI +R + ++ N ++D
Sbjct: 271 FLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL-CNGLMD 324
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT----EIGEAIAKQILKLEPR 516
+ + GQ+ +A + +++PS S + +++ A + GD EI + ++ + P
Sbjct: 325 MYGKCGQIVQARTIFRAIPS-KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP- 382
Query: 517 NSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPG 554
NS +++++ + A G E M K+K + PG
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEK-YRLVPG 419
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 244/488 (50%), Gaps = 41/488 (8%)
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK---ARKMFE 172
+L + + C L+ + K IHG+++R G++ T L+ +K V AR++ E
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 173 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
++ ++ ++ ++ GY EAI ++ M K ++P F L+ A ++D+ L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT-------- 284
R H R + V + N +I Y KC + AR VF+ M RD++SWT
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 285 -----------------------SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 321
+M+TG+ + EA+ F +++ +R D VT+
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 322 LQALSQLGCLS-AVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMTER 379
+ A +QLG A + V + + + + ++LI Y+KCG + A +F M +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ ++++M+ A HG E L LF++M IKP+ +TF L ACSHSGLV++G Q+
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
F SM + + + P HY C++DLL R G+L EA L+K+M LL ACR++
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 499 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
+ EI E A+ + +LEP +Y+L+SN+ A G W V +R + K+K LK TP S +
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Query: 559 ELDKQREV 566
+DK ++
Sbjct: 528 -VDKNGQM 534
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYL--QYARLVFN 273
L +LIS + D ++ + IHG+VLR I ++I T K G YAR V
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 274 RMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSA 333
++ R+ WT++I GY G DEAI ++ +++E + S T +LL+A + L+
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
++ H T+R + V N++I Y KC ++ AR +F +M ER + SW ++ AYA
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 394 HGNY-------------------------------AEVLKLFNHMKLGNIKPDELTFTSI 422
GN E L+ F+ M+ I+ DE+T
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 423 LTACSHSG---LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
++AC+ G + +QI + Y+ V + +ID+ S+ G + EA N+ SM
Sbjct: 288 ISACAQLGASKYADRAVQIAQK--SGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 111/261 (42%), Gaps = 40/261 (15%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR-RGFGVCDEIFETTLLDMYHKC 59
M+ + + P T +LL A + L GR H R RGF C T++DMY KC
Sbjct: 140 MRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF--CFVYVGNTMIDMYVKC 197
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAY------------------------------ 89
+ A VF +M V SW LIAAY
Sbjct: 198 ESIDCARKVFDEM--PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTG 255
Query: 90 -LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 148
N + EA E F +M + D +T+A I +CA+L + + G P
Sbjct: 256 FAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPS 315
Query: 149 --MVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 205
+V +AL+D+YSK +V +A +F + NK+ Y+ M+ G + EA+++FH M
Sbjct: 316 DHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM 375
Query: 206 I-KMSVSPNVALFLNLISAVS 225
+ + + PN F+ + A S
Sbjct: 376 VTQTEIKPNTVTFVGALMACS 396
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 5/164 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKC 59
M+ + + VT+ + A A+LG+ + A + G+ D + + L+DMY KC
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI-HRKVLPDLLTLA 118
G V+ A VF MN + V +++ +I +G+A EA LF M+ ++ P+ +T
Sbjct: 332 GNVEEAVNVFMSMN--NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFV 389
Query: 119 NAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
A+++C+ + G+ + M + GV+P T +VDL +
Sbjct: 390 GALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGR 433
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 240/448 (53%), Gaps = 20/448 (4%)
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS---KFDVTKARKMFERLRNKDAV 180
C+ + +L IHG + ++ D + LV + S D+ AR + +
Sbjct: 23 CSSIKHLLQ---IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPS 79
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N++ GY +D PVE+I V+ EM + + PN F L+ A + + R I V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
L+H + V + N +IH Y C AR VF+ M R++VSW S++T V +G ++
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----NSL 356
F + + D T++ LL A G LS K VH +EL +N +L
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMV----RELELNCRLGTAL 253
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPD 415
+ YAK G L AR +F++M ++ + +W+AM+ A +G E L+LF+ M K +++P+
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 416 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 475
+TF +L ACSH+GLV++G + F M + + I P +HY ++D+L RAG+L EAY+ +
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFI 373
Query: 476 KSMPSTHSSAALCTLLSACRLYGDTE---IGEAIAKQILKLEPRNSSSYVLISNILAEGG 532
K MP + TLLSAC ++ D + IGE + K++++LEP+ S + V+++N AE
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
Query: 533 RWDEVAHIRAMTKDKELKSTPGYSLIEL 560
W E A +R + K+ ++K G S +EL
Sbjct: 434 MWAEAAEVRRVMKETKMKKIAGESCLEL 461
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 161/334 (48%), Gaps = 20/334 (5%)
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
++++ +T +WN L Y + +E+ ++ +M R + P+ LT + +CA L
Sbjct: 71 LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYL 190
G+ I +++ G + D+ L+ LY T ARK+F+ + ++ V +N +MT +
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+N F EMI P+ + L+SA ++ L + +H V+ +
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCR 248
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRE 309
+ ++ YAK G L+YARLVF RM +++ +W++MI G +G +EA+ LF ++++
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKES 308
Query: 310 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE--------LSVNNSLITTYA 361
++R + VT + +L A S G + Y+ FH E + +++
Sbjct: 309 SVRPNYVTFLGVLCACSHTGLVDD-------GYKYFHEMEKIHKIKPMMIHYGAMVDILG 361
Query: 362 KCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMH 394
+ G+LN A ++M E W +L A ++H
Sbjct: 362 RAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 156/333 (46%), Gaps = 23/333 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + PN++T LL A A L GR I ++ GF D L+ +Y C
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF-DVYVGNNLIHLYGTCK 162
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
A VF +M T V SWN ++ A + NG+ FE F +MI ++ PD T+
Sbjct: 163 KTSDARKVFDEM--TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVL 220
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDA 179
+ +C L GK +H ++ +E + TALVD+Y+K + AR +FER+ +K+
Sbjct: 221 LSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNV 278
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
++ M+ G + EA+ +F +M+K SV PN FL ++ A S + G
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVD-----DG 333
Query: 239 YVLRHQYITRVEIANQIIHTYA------KCGYLQYARLVFNRMR-SRDLVSWTSMITG-Y 290
Y H+ +I +IH A + G L A +M D V W ++++
Sbjct: 334 YKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACS 393
Query: 291 VHHGHIDEAI---ILFRLLQRENLRIDSVTLIS 320
+HH DE I + RL++ E R ++ +++
Sbjct: 394 IHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVA 426
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 237/467 (50%), Gaps = 37/467 (7%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 192
K H YMI G+ D + ++ S + A +F + ++N M+
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 193 DLPVE---AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 249
D P AI V+ ++ + P+ F ++ + D+ R IHG V+ + + V
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV 151
Query: 250 EIANQIIHTYAKCGYLQYARLVFNRMRSRDL----------------------------- 280
+ +I Y CG L AR +F+ M +D+
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 281 ----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
VSWT +I+GY G EAI +F+ + EN+ D VTL+++L A + LG L +
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 337 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGN 396
+ + +S+NN++I YAK G + A +F+ + ER + +W ++ A HG+
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 397 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 456
AE L +FN M ++P+++TF +IL+ACSH G V+ G ++F SM +Y I P HY
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 457 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR 516
C+IDLL RAG+L EA ++KSMP ++A +LL+A ++ D E+GE +++KLEP
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 517 NSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
NS +Y+L++N+ + GRWDE +R M K +K G S IE++ +
Sbjct: 452 NSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 52/361 (14%)
Query: 84 PLIAAYLHNG--QALE----------AFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
P YLHN +AL A ++R++ PD T + + +
Sbjct: 74 PCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW 133
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMM---- 186
G+ IHG ++ G + + T L+ +Y S + ARKMF+ + KD ++N ++
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 187 -----------------------------TGYLKNDLPVEAINVFHEMIKMSVSPNVALF 217
+GY K+ EAI VF M+ +V P+
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 218 LNLISAVSDLRDIRLARSIHGYVLRHQYITR-VEIANQIIHTYAKCGYLQYARLVFNRMR 276
L ++SA +DL + L I YV H+ + R V + N +I YAK G + A VF +
Sbjct: 254 LAVLSACADLGSLELGERICSYV-DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN 312
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
R++V+WT++I G HGH EA+ +F + + +R + VT I++L A S +G + K
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 337 VHCLTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAM 393
+ + R+ +G ++ + +I + GKL A + + M + + W ++L A +
Sbjct: 373 LFN-SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNV 431
Query: 394 H 394
H
Sbjct: 432 H 432
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 148/322 (45%), Gaps = 38/322 (11%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T +L A ++ + GR IHG + GF + T L+ MY CGG+ A
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV-TGLIQMYFSCGGLGDARK 172
Query: 68 VFGKM--------NATSTTVG-----------------------SWNPLIAAYLHNGQAL 96
+F +M NA G SW +I+ Y +G+A
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
EA E+F++M+ V PD +TL + +CA+L L G+ I Y+ G+ + A++
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 157 DLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 215
D+Y+K ++TKA +FE + ++ V + ++ G + EA+ +F+ M+K V PN
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 352
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFN 273
F+ ++SA S + + L + + +R +Y I + +I + G L+ A V
Sbjct: 353 TFIAILSACSHVGWVDLGKRLFNS-MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 274 RMRSR-DLVSWTSMITGY-VHH 293
M + + W S++ VHH
Sbjct: 412 SMPFKANAAIWGSLLAASNVHH 433
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 4 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVK 63
+ + P+ VTL+++L A A LGSL+ G I Y RG + ++DMY K G +
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSL-NNAVIDMYAKSGNIT 302
Query: 64 MAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 123
A VF +N V +W +IA +G EA +F +M+ V P+ +T + +
Sbjct: 303 KALDVFECVN--ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 124 CAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN----KD 178
C+ + ++ GK + M + G+ P++ ++DL + K R+ E +++ +
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR--AGKLREADEVIKSMPFKAN 418
Query: 179 AVIYNVMMTGY-LKNDLPVEAINVFHEMIKMSV--SPNVALFLNLISAVSDLRDIRLARS 235
A I+ ++ + +DL + E+IK+ S N L NL S + + R+ R+
Sbjct: 419 AAIWGSLLAASNVHHDLEL-GERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRN 477
Query: 236 I 236
+
Sbjct: 478 M 478
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 253/478 (52%), Gaps = 35/478 (7%)
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIY 182
CA L K++H +++++G+ LV++Y K + A ++F+ + ++D + +
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
++T + +L + ++VF + S + P+ +F L+ A ++L I R +H + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
+Y + + ++ YAKCG L A+ VF+ +R ++ +SWT+M++GY G +EA+
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 302 LFRLLQRENLR--------------------------------IDSVTLISLLQALSQLG 329
LFR+L +NL +D + L S++ A + L
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
A ++VH L + ++N+LI YAKC + A+ +F +M R + SW +++
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIV 312
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
A HG + L L++ M +KP+E+TF ++ ACSH G VE+G ++F+SM ++Y I
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 509
P HY C++DLL R+G L EA NL+ +MP LLSAC+ G ++G IA
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 510 IL-KLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQREV 566
++ + ++ S+Y+L+SNI A W +V+ R + E++ PG+S +E+ K+ EV
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEV 490
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 205/471 (43%), Gaps = 80/471 (16%)
Query: 17 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS 76
L A+ +L +A+H + ++ G C + TL+++Y KCG A VF +M
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPL-ANTLVNVYGKCGAASHALQVFDEMPHRD 68
Query: 77 TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILSCAELDYLCHGKS 135
+W ++ A + + +F + L PD + + +CA L + HG+
Sbjct: 69 HI--AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND- 193
+H + I D V ++LVD+Y+K + A+ +F+ +R K+ + + M++GY K+
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 194 ----------LPV--------------------EAINVFHEMIKMSVSPNVALFL-NLIS 222
LPV EA +VF EM + V L L +++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
A ++L R +HG V+ + + V I+N +I YAKC + A+ +F+RMR RD+VS
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
WTS+I G HG ++A+ L+ + ++ + VT + L+ A S +G + +E
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE------ 360
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER-----CLTSWNAMLGAYAMHGNY 397
LFQ MT+ L + +L G
Sbjct: 361 -----------------------------LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 448
E L + M PDE T+ ++L+AC G + G++I ++ + +
Sbjct: 392 DEAENLIHTMPF---PPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKL 439
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 132/262 (50%), Gaps = 32/262 (12%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
L P+ +L+ A A LGS+ GR +H + I + DE+ +++L+DMY KCG + A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN-DEVVKSSLVDMYAKCGLLNSA 159
Query: 66 AAVFGKMNATST-----------------------------TVGSWNPLIAAYLHNGQAL 96
AVF + +T + SW LI+ ++ +G+ L
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGL 219
Query: 97 EAFELFRQMIHRKV-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 155
EAF +F +M +V + D L L++ + +CA L G+ +HG +I +G + + AL
Sbjct: 220 EAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 156 VDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
+D+Y+K DV A+ +F R+R++D V + ++ G ++ +A+ ++ +M+ V PN
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 215 ALFLNLISAVSDLRDIRLARSI 236
F+ LI A S + + R +
Sbjct: 340 VTFVGLIYACSHVGFVEKGREL 361
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
+ + L S++ A A L + GR +HG I GF C I L+DMY KC V A +
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFI-SNALIDMYAKCSDVIAAKDI 295
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F +M V SW LI +GQA +A L+ M+ V P+ +T I +C+ +
Sbjct: 296 FSRMR--HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVG 353
Query: 129 YLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSK 161
++ G+ + M + G+ P + T L+DL +
Sbjct: 354 FVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 211/406 (51%), Gaps = 35/406 (8%)
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR--LARSIHGYVLRHQYI-T 247
+N EA F +M V PN F+ L+S D L +HGY +
Sbjct: 48 RNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRN 107
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFN-------------------------------RMR 276
V + II Y+K G + ARLVF+ +M
Sbjct: 108 HVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMP 167
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
RDL+SWT+MI G+V G+ +EA++ FR +Q ++ D V +I+ L A + LG LS
Sbjct: 168 ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLW 227
Query: 337 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGN 396
VH + V+NSLI Y +CG + AR +F M +R + SWN+++ +A +GN
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 397 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 456
E L F M+ KPD +TFT LTACSH GLVEEGL+ F+ M +Y I P HY
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYG 347
Query: 457 CIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI-GEAIAKQILKLEP 515
C++DL SRAG+L +A LV+SMP + + +LL+AC +G+ + E + K + L
Sbjct: 348 CLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNV 407
Query: 516 RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
++ S+YV++SN+ A G+W+ + +R K LK PG+S IE+D
Sbjct: 408 KSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 171/392 (43%), Gaps = 68/392 (17%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCH- 132
+TS T SW I NG+ EA + F M V P+ +T + C +
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEA 90
Query: 133 -GKSIHGYMIRMGVEPDMVAC-TALVDLYSK----------FD----------------- 163
G +HGY ++G++ + V TA++ +YSK FD
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGY 150
Query: 164 -----VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 218
V A KMF+++ +D + + M+ G++K EA+ F EM V P+ +
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAII 210
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
++A ++L + +H YVL + V ++N +I Y +CG +++AR VF M R
Sbjct: 211 AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR 270
Query: 279 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 338
+VSW S+I G+ +G+ E+++ FR +Q + + D+VT L A S +G +
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE----- 325
Query: 339 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 398
R F KC +++ R + + ++ Y+ G
Sbjct: 326 --GLRYFQ-------------IMKCD---------YRISPR-IEHYGCLVDLYSRAGRLE 360
Query: 399 EVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
+ LKL M + KP+E+ S+L ACS+ G
Sbjct: 361 DALKLVQSMPM---KPNEVVIGSLLAACSNHG 389
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 138/324 (42%), Gaps = 38/324 (11%)
Query: 8 PNRVTLVSLLHAAAKLGSLQE--GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
PN +T ++LL S E G +HGYA + G + T ++ MY K G K A
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA 128
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-------------- 111
VF M ++ +WN +I Y+ +GQ A ++F +M R ++
Sbjct: 129 RLVFDYMEDKNSV--TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGY 186
Query: 112 -----------------PDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 154
PD + + A+ +C L L G +H Y++ + ++ +
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS 246
Query: 155 LVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 213
L+DLY + V AR++F + + V +N ++ G+ N E++ F +M + P+
Sbjct: 247 LIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPD 306
Query: 214 VALFLNLISAVSDLRDIRLA-RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RLV 271
F ++A S + + R ++ R+E ++ Y++ G L+ A +LV
Sbjct: 307 AVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV 366
Query: 272 FNRMRSRDLVSWTSMITGYVHHGH 295
+ + V S++ +HG+
Sbjct: 367 QSMPMKPNEVVIGSLLAACSNHGN 390
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + P+ V +++ L+A LG+L G +H Y + + F + +L+D+Y +CG
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRV-SNSLIDLYCRCG 255
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V+ A VF N TV SWN +I + NG A E+ FR+M + PD +T A
Sbjct: 256 CVEFARQVF--YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGA 313
Query: 121 ILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK 161
+ +C+ + + G M + P + LVDLYS+
Sbjct: 314 LTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSR 355
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 253/518 (48%), Gaps = 57/518 (11%)
Query: 88 AYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEP 147
+YLH + A +L Q I +A++S + +L H K + +MI G+
Sbjct: 9 SYLHAPSSHMAEQLLNQFI------------SAVISKSR--HLNHLKQVQSFMIVSGLSH 54
Query: 148 DMVACTALVDLYSK--FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV---EAINVF 202
C L+ + +++ AR +F+R + +Y ++T Y + LP+ A + F
Sbjct: 55 SHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFF 113
Query: 203 HEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK 261
M+ SV PN ++ ++ + L +H ++ + + V + ++H+YA
Sbjct: 114 RLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYAS 173
Query: 262 C-GYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF----------------- 303
++ AR +F+ M R++VSWT+M++GY G I A+ LF
Sbjct: 174 SVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAA 233
Query: 304 ---------------RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
R++ ++R + VT++ +L A +Q G L K +H YR
Sbjct: 234 CTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSS 293
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM- 407
++ V+NSL+ Y KCG L A +F+ +++ LT+WN+M+ +A+HG E + +F M
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMM 353
Query: 408 --KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
+ +IKPD +TF +L AC+H GLV +G F M + I P HY C+IDLL RA
Sbjct: 354 KLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRA 413
Query: 466 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 525
G+ EA ++ +M A +LL+AC+++G ++ E K ++ L P N +++
Sbjct: 414 GRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMA 473
Query: 526 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
N+ E G W+E R M K + PG+S IE+D +
Sbjct: 474 NLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNE 511
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 9/257 (3%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
T +L Y + G + A A+F M V SWN ++AA NG LEA LFR+MI+
Sbjct: 197 TAMLSGYARSGDISNAVALFEDM--PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEP 254
Query: 110 -VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKA 167
+ P+ +T+ + +CA+ L K IH + R + D+ +LVDLY K ++ +A
Sbjct: 255 SIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Query: 168 RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS---PNVALFLNLISAV 224
+F+ K +N M+ + + EAI VF EM+K++++ P+ F+ L++A
Sbjct: 315 SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
Query: 225 SDLRDIRLARSIHGYVL-RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVS 282
+ + R + R R+E +I + G A V + M+ + D
Sbjct: 375 THGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 283 WTSMITGYVHHGHIDEA 299
W S++ HGH+D A
Sbjct: 435 WGSLLNACKIHGHLDLA 451
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 139/279 (49%), Gaps = 31/279 (11%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ + + PN VT+V +L A A+ G+LQ + IH +A RR D +L+D+Y KCG
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS-SDVFVSNSLVDLYGKCG 309
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH---RKVLPDLLTL 117
++ A++VF KM A+ ++ +WN +I + +G++ EA +F +M+ + PD +T
Sbjct: 310 NLEEASSVF-KM-ASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 118 ANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLY---SKFDVTKARKMFER 173
+ +C + G+ M R G+EP + L+DL +FD +A ++
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFD--EALEVMST 425
Query: 174 LRNK-DAVIYNVMMT-----GYLKNDLPVEAINVFHEMIKMSVSPN----VALFLNLISA 223
++ K D I+ ++ G+L DL A+ ++++PN VA+ NL
Sbjct: 426 MKMKADEAIWGSLLNACKIHGHL--DLAEVAVKNL-----VALNPNNGGYVAMMANLYGE 478
Query: 224 VSDLRDIRLARSI--HGYVLRHQYITRVEIANQIIHTYA 260
+ + + R AR + H + +R+EI N++ Y+
Sbjct: 479 MGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYS 517
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/515 (30%), Positives = 261/515 (50%), Gaps = 56/515 (10%)
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G +K A +F ++ ++ N ++ + + + L+ +M R V PD T
Sbjct: 60 GALKYAHKLFDEIPKPDVSIC--NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTF 117
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
+ +C++L++ +G + HG ++R G + AL+ ++ D+ A ++F+
Sbjct: 118 VLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAH 177
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
V ++ M +GY K EA+ +F EM K V+ NV
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNV----------------------- 214
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 297
+I KC + AR +F+R +D+V+W +MI+GYV+ G+
Sbjct: 215 -----------------MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-------CLTYRAFHGKEL 350
EA+ +F+ ++ D VT++SLL A + LG L K +H ++ + G
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT-- 315
Query: 351 SVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAE-VLKLFNHMKL 409
+ N+LI YAKCG ++ A +F+ + +R L++WN ++ A+H +AE +++F M+
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH--HAEGSIEMFEEMQR 373
Query: 410 GNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLT 469
+ P+E+TF ++ ACSHSG V+EG + F M Y I P HY C++D+L RAGQL
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLE 433
Query: 470 EAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILA 529
EA+ V+SM ++ TLL AC++YG+ E+G+ +++L + S YVL+SNI A
Sbjct: 434 EAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYA 493
Query: 530 EGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQR 564
G+WD V +R M D +K G SLIE D +
Sbjct: 494 STGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDK 528
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 206/453 (45%), Gaps = 53/453 (11%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + P+R T +L A +KL G A HG +R GF V +E + L+ + CG
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF-VLNEYVKNALILFHANCG 161
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ +A+ +F +A + V +W+ + + Y G+ EA LF +M ++ + +
Sbjct: 162 DLGIASELFDD-SAKAHKV-AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVA-WNVMITG 218
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAV 180
L C E+D AR++F+R KD V
Sbjct: 219 CLKCKEMD-------------------------------------SARELFDRFTEKDVV 241
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N M++GY+ P EA+ +F EM P+V L+L+SA + L D+ + +H Y+
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 241 LRHQYITR-----VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
L ++ I N +I YAKCG + A VF ++ RDL +W ++I G H H
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-H 360
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN- 354
+ +I +F +QR + + VT I ++ A S G + ++ L R + E ++ +
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM-RDMYNIEPNIKHY 419
Query: 355 -SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
++ + G+L A + M E W +LGA ++GN E+ K N KL ++
Sbjct: 420 GCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGN-VELGKYANE-KLLSM 477
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
+ DE +L+ S +G+Q R M +
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 186/423 (43%), Gaps = 53/423 (12%)
Query: 134 KSIHGYMIRMGVEPDMVACTALV---DLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYL 190
K IH M+ G+ ++ L+ L + A K+F+ + D I N ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
++ P + ++++ EM K VSP+ F ++ A S L + HG V+RH ++
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+ N +I +A CG L A +F+ V+W+SM +GY G IDEA+ LF + +
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK- 207
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
D V N +IT KC +++ AR
Sbjct: 208 ---DQVAW-----------------------------------NVMITGCLKCKEMDSAR 229
Query: 371 YLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSG 430
LF + TE+ + +WNAM+ Y G E L +F M+ PD +T S+L+AC+ G
Sbjct: 230 ELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 431 LVEEG----LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
+E G + I + +I G +N +ID+ ++ G + A + + + S
Sbjct: 290 DLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS-T 348
Query: 487 LCTLLSACRLY---GDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 543
TL+ L+ G E+ E + Q LK+ P N +++ + + GR DE ++
Sbjct: 349 WNTLIVGLALHHAEGSIEMFEEM--QRLKVWP-NEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 544 TKD 546
+D
Sbjct: 406 MRD 408
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 247/444 (55%), Gaps = 2/444 (0%)
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT-KARKMFERLR 175
+ + +LS A G +HGY+++ G+ + L++ YSK + +R+ FE
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
K + ++ +++ + +N+LP ++ +M+ ++ P+ + + + + L + RS
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGH 295
+H ++ Y V + + ++ YAKCG + YAR +F+ M R++V+W+ M+ GY G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 355
+EA+ LF+ ENL ++ + S++ + L +++H L+ ++ V +S
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 356 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
L++ Y+KCG A +F ++ + L WNAML AYA H + +V++LF MKL +KP+
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN 317
Query: 416 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 475
+TF ++L ACSH+GLV+EG F M +E I P + HY ++D+L RAG+L EA ++
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 476 KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWD 535
+MP + + LL++C ++ +TE+ A ++ +L P +S ++ +SN A GR++
Sbjct: 377 TNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFE 436
Query: 536 EVAHIRAMTKDKELKSTPGYSLIE 559
+ A R + +D+ K G S +E
Sbjct: 437 DAAKARKLLRDRGEKKETGLSWVE 460
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 236/469 (50%), Gaps = 41/469 (8%)
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLK 191
GK IH +I+ G +PD+ L+ L+ K ++ AR++F+ L YN M++GYLK
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI------RLARSIHGYVLRHQY 245
+ L E + + M S L+++ S+ R L R +H +++
Sbjct: 113 HGLVKELLLLVQRM-SYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
+ ++ TY K G L+ AR VF M+ ++V TSMI+GY++ G +++A +F
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 306 --------------------------------LQRENLRIDSVTLISLLQALSQLGCLSA 333
+QR + T S++ A S L
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
++VH ++ + + +SL+ YAKCG +N AR +F QM E+ + SW +M+ Y
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 453
+GN E L+LF MK I+P+ +TF L+ACSHSGLV++G +IF SM R+Y++ P
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 454 HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 513
HY CI+DL+ RAG L +A+ ++MP S LLS+C L+G+ E+ A ++ KL
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Query: 514 EP-RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+ +Y+ +SN+ A +WD V+ IR + K + + T G S D
Sbjct: 472 NADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 207/441 (46%), Gaps = 56/441 (12%)
Query: 7 YPNRVTLVSLLHAAAKLGSLQE---------GRAIHGYAIRRGFGVCDEIFETTLLDMYH 57
+P + + SL A G+LQE G+ IH I+ GF D LL ++
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQP-DLNISIKLLILHL 80
Query: 58 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
KCG + A VF ++ T+ ++N +I+ YL +G E L ++M + D TL
Sbjct: 81 KCGCLSYARQVFDEL--PKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 118 A------NAILSCAELD-YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARK 169
+ N+ S L LC + +H +I+ VE D V TALVD Y K + AR
Sbjct: 139 SMVLKASNSRGSTMILPRSLC--RLVHARIIKCDVELDDVLITALVDTYVKSGKLESART 196
Query: 170 MFERLRN-------------------------------KDAVIYNVMMTGYLKN-DLPVE 197
+FE +++ KD V+YN M+ G+ ++ +
Sbjct: 197 VFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKR 256
Query: 198 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
+++++ M + PN++ F ++I A S L + + +H +++ T +++ + ++
Sbjct: 257 SVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 317
YAKCG + AR VF++M+ +++ SWTSMI GY +G+ +EA+ LF ++ + + VT
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 318 LISLLQALSQLGCLSAVKEVHCLTYRAFHGK-ELSVNNSLITTYAKCGKLNMARYLFQQM 376
+ L A S G + E+ R + K ++ ++ + G LN A + M
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 377 TERCLTS-WNAMLGAYAMHGN 396
ER + W A+L + +HGN
Sbjct: 437 PERPDSDIWAALLSSCNLHGN 457
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 156/342 (45%), Gaps = 35/342 (10%)
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 290
+ + IH +++ + + I+ +++ + KCG L YAR VF+ + L ++ MI+GY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 291 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK-- 348
+ HG + E ++L + + + D TL +L+A + G + C R H +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLC---RLVHARII 167
Query: 349 --ELSVNNSLIT----TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
++ +++ LIT TY K GKL AR +F+ M + + +M+ Y G + +
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSG-LVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
+FN K+ +I + + +++ S SG + + ++ SM R P + +I
Sbjct: 228 IFNTTKVKDI----VVYNAMVEGFSRSGETAKRSVDMYISMQRA-GFHPNISTFASVIGA 282
Query: 462 LS-----RAGQLTEAYNLVKSMPSTH--SSAALCTLLSACRLYGDTEIGEAIAKQIL-KL 513
S GQ A ++KS TH ++L + + C D A+++ ++
Sbjct: 283 CSVLTSHEVGQQVHA-QIMKSGVYTHIKMGSSLLDMYAKCGGIND-------ARRVFDQM 334
Query: 514 EPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGY 555
+ +N S+ + + + G +E + T+ KE + P Y
Sbjct: 335 QEKNVFSWTSMIDGYGKNGNPEEALEL--FTRMKEFRIEPNY 374
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEI-FETTLLDMYHKC 59
MQ +PN T S++ A + L S + G+ +H ++ GV I ++LLDMY KC
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS--GVYTHIKMGSSLLDMYAKC 321
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
GG+ A VF +M V SW +I Y NG EA ELF +M ++ P+ +T
Sbjct: 322 GGINDARRVFDQMQ--EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 120 AILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKF-DVTK----ARKMFER 173
A+ +C+ + G I M R ++P M +VDL + D+ K AR M ER
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 174 LRNKDAVIYNVMMTG-YLKNDLPVEAINVFHEMIKMSVS--PNVALFLNLISAVSDLRD 229
D+ I+ +++ L ++ + +I E+ K++ P L L+ + A +D D
Sbjct: 440 ---PDSDIWAALLSSCNLHGNVELASIAA-SELFKLNADKRPGAYLALSNVYASNDKWD 494
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/644 (27%), Positives = 304/644 (47%), Gaps = 105/644 (16%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFG----VCDEIFETTLLDMYHKCGGVKMAAAV 68
LVS L + A + GR IH ++ G +C+ + L+MY KC + A +V
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSV-----LNMYAKCRLLADAESV 98
Query: 69 F---GKMNATSTTVG--------------------------SWNPLIAAYLHNGQALEAF 99
F K+++ S + S+ LI Y N Q EA
Sbjct: 99 FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 100 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 159
ELFR+M + ++ + +TLA I +C+ L + + + I++ +E + T L+ +Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 160 SK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH--------------- 203
+ ARK+F+ + ++ V +NVM+ GY K L +A +F
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 204 ----------------EMIKMSVSPNVALFLNLISAVS--------------------DL 227
EM++ + P+ + ++L+SA + D
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDC 338
Query: 228 RDIRLARSIHGYVLRH-------QYITRVE--IA--NQIIHTYAKCGYLQYARLVFNRMR 276
D A IH Y + + Q+ V+ IA N +I + K G ++ AR VF++
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH 398
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVK 335
+D+ SW +MI+GY A+ LFR ++ ++ D++T++S+ A+S LG L K
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK 458
Query: 336 EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ---MTERCLTSWNAMLGAYA 392
H + ++ ++I YAKCG + A +F Q ++ ++ WNA++ A
Sbjct: 459 RAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSA 518
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 452
HG+ L L++ ++ IKP+ +TF +L+AC H+GLVE G F SM ++ I P
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDI 578
Query: 453 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 512
HY C++DLL +AG+L EA ++K MP LLSA R +G+ EI E A ++
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAA 638
Query: 513 LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
++P + V++SN+ A+ GRW++VA +R + ++++ + +S
Sbjct: 639 IDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFS 682
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 146/330 (44%), Gaps = 41/330 (12%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
+ P+ V +V LL A+A+ +G +HG ++RGF C + + T++ Y +K+A
Sbjct: 301 MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD-CYDFLQATIIHFYAVSNDIKLA 359
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNG---QALEAFE---------------------- 100
F + + S N LIA ++ NG QA E F+
Sbjct: 360 LQQFEA--SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Query: 101 ------LFRQMI-HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACT 153
LFR+MI +V PD +T+ + + + L L GK H Y+ + P+
Sbjct: 418 PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA 477
Query: 154 ALVDLYSKF-DVTKARKMFERLRNKDAVI---YNVMMTGYLKNDLPVEAINVFHEMIKMS 209
A++D+Y+K + A +F + +N + +N ++ G + A++++ ++ +
Sbjct: 478 AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP 537
Query: 210 VSPNVALFLNLISAVSDLRDIRLARS-IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA 268
+ PN F+ ++SA + L ++ H ++ ++ K G L+ A
Sbjct: 538 IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEA 597
Query: 269 RLVFNRMRSR-DLVSWTSMITGYVHHGHID 297
+ + +M + D++ W +++ HG+++
Sbjct: 598 KEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ ++ P+ +T+VS+ A + LGSL+EG+ H Y D + ++DMY KCG
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL-TAAIIDMYAKCG 487
Query: 61 GVKMAAAVFGKM-NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
++ A +F + N +S+T+ WN +I +G A A +L+ + + P+ +T
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 120 AILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK 177
+ +C + GK+ M G+EPD+ +VDL K + +A++M +++ K
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVK 607
Query: 178 -DAVIYNVMMTG 188
D +I+ ++++
Sbjct: 608 ADVMIWGMLLSA 619
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 286/593 (48%), Gaps = 82/593 (13%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGF----GVCDEIFETTLLDMYHKCGGVKMAAA 67
T+V LL + EGR IHGY +R G +C+ +L+ MY + G ++++
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN-----SLIVMYSRNGKLELSRK 145
Query: 68 VFGKMN-----------ATSTTVG----------------------SWNPLIAAYLHNGQ 94
VF M ++ T +G +WN L++ Y G
Sbjct: 146 VFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 154
+ +A + ++M + P ++++ + + AE +L GK+IHGY++R + D+ T
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETT 265
Query: 155 LVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 213
L+D+Y K + AR +F+ + K+ V +N +++G L +A + M K + P+
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 214 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 273
+ N + YA G + A V
Sbjct: 326 AITW-----------------------------------NSLASGYATLGKPEKALDVIG 350
Query: 274 RMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
+M+ + ++VSWT++ +G +G+ A+ +F +Q E + ++ T+ +LL+ L L
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
L + KEVH R + V +L+ Y K G L A +F + + L SWN ML
Sbjct: 411 LLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLM 470
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
YAM G E + F+ M ++PD +TFTS+L+ C +SGLV+EG + F M Y I+
Sbjct: 471 GYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGII 530
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 509
P H +C++DLL R+G L EA++ +++M + LS+C+++ D E+ E K+
Sbjct: 531 PTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKR 590
Query: 510 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 562
+ LEP NS++Y+++ N+ + RW++V IR + ++ ++ +S I++D+
Sbjct: 591 LQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQ 643
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 236/529 (44%), Gaps = 81/529 (15%)
Query: 29 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 88
G IHG I+RG D + + Y +C + A +F +M +WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDL--AWNEIVMV 63
Query: 89 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 148
L +G +A ELFR+M T+ + C+ + G+ IHGY++R+G+E +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 149 MVACTALVDLYSK-FDVTKARKMFERLRNK------------------------------ 177
+ C +L+ +YS+ + +RK+F ++++
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 178 -----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D V +N +++GY L +AI V M + P+ + +L+ AV++ ++L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
++IHGY+LR+Q V + +I Y K GYL YAR+VF+ M ++++V+W S+++G +
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+ +A L +++E ++ D++T
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITW---------------------------------- 329
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMK 408
NSL + YA GK A + +M E+ + SW A+ + +GN+ LK+F M+
Sbjct: 330 -NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
+ P+ T +++L L+ G ++ +R+ I V ++D+ ++G L
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA-TALVDMYGKSGDL 447
Query: 469 TEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK--LEP 515
A + + + ++ C L+ ++G E G A +L+ +EP
Sbjct: 448 QSAIEIFWGIKNKSLASWNCMLMGYA-MFGRGEEGIAAFSVMLEAGMEP 495
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 174/405 (42%), Gaps = 53/405 (13%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ L P+ ++ SLL A A+ G L+ G+AIHGY +R D ETTL+DMY K G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWY-DVYVETTLIDMYIKTG 274
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ A VF M+A + +WN L++
Sbjct: 275 YLPYARMVFDMMDAKNIV--AWNSLVSG-------------------------------- 300
Query: 121 ILSCAELDYLCHGKSIHGYMIRM---GVEPDMVACTALVDLYSKF-DVTKARKMFERLRN 176
L Y C K MIRM G++PD + +L Y+ KA + +++
Sbjct: 301 ------LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 177 K----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
K + V + + +G KN A+ VF +M + V PN A L+ + L +
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
+ +HG+ LR I +A ++ Y K G LQ A +F ++++ L SW M+ GY
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
G +E I F ++ + D++T S+L G + + L R+ +G ++
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM-RSRYGIIPTI 533
Query: 353 N--NSLITTYAKCGKLNMARYLFQQMTERC-LTSWNAMLGAYAMH 394
+ ++ + G L+ A Q M+ + T W A L + +H
Sbjct: 534 EHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 116/214 (54%), Gaps = 5/214 (2%)
Query: 232 LARSIHGYVLRH---QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMIT 288
L +IHG +++ TRV A+ + Y +C L +A +F+ M RD ++W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSAS--MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVM 62
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
+ G+ ++A+ LFR +Q + T++ LLQ S + +++H R
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
+S+ NSLI Y++ GKL ++R +F M +R L+SWN++L +Y G + + L + M+
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
+ +KPD +T+ S+L+ + GL ++ + + + M
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 260/510 (50%), Gaps = 46/510 (9%)
Query: 85 LIAAYLHNGQALEAFELFRQMIHRKV-LPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 143
LI ++ G ++A L+ + R V P + L +C + + GK +H I+
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESIKF 75
Query: 144 GVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVF 202
GV D++ ++L+ +Y K V ARK+F+ + ++ +N M+ GY+ N V A +F
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF 135
Query: 203 HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH---GYVLRH---------------- 243
E+ SV N ++ +I +I AR + + L++
Sbjct: 136 EEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 244 -----QYITRVEIANQIIHTYAKCGYLQY-----ARLVFNRMRSRDLVSWTSMITGYVHH 293
++ + N + + GY + AR +F R+ +RDLV W ++I GY +
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS-- 351
G+ D+AI F +Q E D+VT+ S+L A +Q G L +EVH L G EL+
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH--RGIELNQF 310
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
V+N+LI YAKCG L A +F+ ++ R + N+M+ A+HG E L++F+ M+ +
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD 370
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
+KPDE+TF ++LTAC H G + EGL+IF M + + P H+ C+I LL R+G+L EA
Sbjct: 371 LKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEA 429
Query: 472 YNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY-----VLISN 526
Y LVK M + L LL AC+++ DTE+ E + K I++ ++SY ISN
Sbjct: 430 YRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISN 488
Query: 527 ILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
+ A RW +R + + L+ +PG S
Sbjct: 489 LYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 193/425 (45%), Gaps = 50/425 (11%)
Query: 7 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMA 65
+P V L+ L A + + G+ +H +I+ FGVC ++ ++L+ MY KCG V A
Sbjct: 44 FPGWVPLI-LRACACVVPRVVLGKLLHSESIK--FGVCSDVMVGSSLISMYGKCGCVVSA 100
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
VF +M V +WN +I Y+ NG A+ A LF ++ V + +T I
Sbjct: 101 RKVFDEM--PERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYG 155
Query: 126 ELDYLCHG-----------KSIHGYMIRMGV------------------EPDMVACTALV 156
+ + K++ + + +GV E + + ++
Sbjct: 156 KRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMM 215
Query: 157 DLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 215
Y + DV +AR +F R+ +D VI+N ++ GY +N +AI+ F M P+
Sbjct: 216 SGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAV 275
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-IANQIIHTYAKCGYLQYARLVFNR 274
+++SA + + + R +H ++ H+ I + ++N +I YAKCG L+ A VF
Sbjct: 276 TVSSILSACAQSGRLDVGREVHS-LINHRGIELNQFVSNALIDMYAKCGDLENATSVFES 334
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
+ R + SMI+ HG EA+ +F ++ +L+ D +T I++L A G L
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG 394
Query: 335 KEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLG 389
++ + +++ N LI + GKL A L ++M + T A+LG
Sbjct: 395 LKI----FSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLG 450
Query: 390 AYAMH 394
A +H
Sbjct: 451 ACKVH 455
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + P+ VT+ S+L A A+ G L GR +H RG + ++ L+DMY KCG
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL-NQFVSNALIDMYAKCG 323
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A +VF ++ S V N +I+ +G+ EA E+F M + PD +T
Sbjct: 324 DLENATSVFESISVRS--VACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
+ +C +L G I M V+P++ L+ L +
Sbjct: 382 LTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGR 422
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
+++I ++ G +A++L+ ++R + + L + + K +H + +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 344 AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
++ V +SLI+ Y KCG + AR +F +M ER + +WNAM+G Y +G+ L
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
F + ++ + +T+ ++ +E+ ++F M E
Sbjct: 135 FEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE 173
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 250/515 (48%), Gaps = 67/515 (13%)
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACTALVDLYSK----------FD-- 163
LA+ + C + L GK IH ++ G + P+ + L+ +Y K FD
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 164 --------------------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 203
+ +AR +F+ + +D V +N M+ GY ++ EA+ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
E + + N F L++A R ++L R HG VL +++ V ++ II YAKCG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 264 YLQYARLVFNRMRSRDL-------------------------------VSWTSMITGYVH 292
++ A+ F+ M +D+ VSWT++I GYV
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
G + A+ LFR + ++ + T S L A + + L KE+H R V
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTER--CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
+SLI Y+K G L + +F+ ++ C+ WN M+ A A HG + L++ + M
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVF-WNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
++P+ T IL ACSHSGLVEEGL+ F SM ++ IVP + HY C+IDLL RAG E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 471 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAE 530
++ MP +L CR++G+ E+G+ A +++KL+P +S+ Y+L+S+I A+
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 531 GGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQRE 565
G+W+ V +R + K + + S IE++K+ E
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVE 562
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 32/248 (12%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N + LL A K LQ R HG + GF + + + +++D Y KCG ++ A
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF-LSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 69 FGKMNATSTTVG-----------------------------SWNPLIAAYLHNGQALEAF 99
F +M + SW LIA Y+ G A
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 100 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 159
+LFR+MI V P+ T ++ + + A + L HGK IHGYMIR V P+ + ++L+D+Y
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 160 SKFDVTKARKMFERLRNK--DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALF 217
SK +A + R+ + D V +N M++ ++ L +A+ + +MIK V PN
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 218 LNLISAVS 225
+ +++A S
Sbjct: 417 VVILNACS 424
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 181/450 (40%), Gaps = 68/450 (15%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKM 72
L SLL SL++G+ IH + GF + + L+ MY KCG A VF +M
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 73 -----------------------------NATSTTVGSWNPLIAAYLHNGQALEAFELFR 103
+ V SWN ++ Y +G EA ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF- 162
+ + + + A + +C + L + HG ++ G ++V +++D Y+K
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 163 -------------------------------DVTKARKMFERLRNKDAVIYNVMMTGYLK 191
D+ A K+F + K+ V + ++ GY++
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
A+++F +MI + V P F + + A + + +R + IHGY++R +
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+ +I Y+K G L+ + VF + D V W +MI+ HG +A+ + + +
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 311 LRIDSVTLISLLQALSQLGCL-SAVKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLN 367
++ + TL+ +L A S G + ++ +T + HG + LI + G
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ--HGIVPDQEHYACLIDLLGRAGCFK 466
Query: 368 -MARYLFQQMTERCLTSWNAMLGAYAMHGN 396
+ R + + E WNA+LG +HGN
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 114/293 (38%), Gaps = 46/293 (15%)
Query: 276 RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 335
R R + S ++ + + +A+ L ++ +R+ L SLLQ L K
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 336 EVH-CLTYRAFHGKELSVNNSLITTYAKCGK----------------------------- 365
+H L F ++N LI Y KCGK
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 366 --LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
L AR +F M ER + SWN M+ YA GN E L + + IK +E +F +L
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPG---EVHYNC-IIDLLSRAGQLTEAYNLVKSMP 479
TAC S LQ+ R +V G V +C IID ++ GQ+ A M
Sbjct: 187 TACVKS----RQLQLNRQA-HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM- 240
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYV-LISNILAEG 531
+ TL+S GD E E K ++ +N S+ LI+ + +G
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAE---KLFCEMPEKNPVSWTALIAGYVRQG 290
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P + T S L A+A + SL+ G+ IHGY IR + I ++L+DMY K G ++ +
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP-NAIVISSLIDMYSKSGSLEASER 367
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + V WN +I+A +G +A + MI +V P+ TL + +C+
Sbjct: 368 VFRICDDKHDCV-FWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 128 DYLCHG-KSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKA--RKMFERLRNKDAVIYNV 184
+ G + ++ G+ PD L+DL + K RK+ E D I+N
Sbjct: 427 GLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNA 486
Query: 185 MM 186
++
Sbjct: 487 IL 488
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 254/536 (47%), Gaps = 55/536 (10%)
Query: 79 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD------------LLTLANAILSCAE 126
+GSWN +++ Y NG EA +LF +M R V+ ++ N E
Sbjct: 48 IGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPE 107
Query: 127 LDYLCHGKSIHGYM------------IRMGVEPDMVACTALVDLYSKFDVTKARKMFERL 174
+ + + GYM RM ++ L + KARK+++ +
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
KD V M+ G + EA +F EM + NV + +I+ + +AR
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVAR 223
Query: 235 ------------SIHGYVLRHQYITRVEIA---------------NQIIHTYAKCGYLQY 267
S +L + R+E A N +I + + G +
Sbjct: 224 KLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISK 283
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
AR VF+ M RD +W MI Y G EA+ LF +Q++ +R +LIS+L +
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAM 387
L L ++VH R ++ V + L+T Y KCG+L A+ +F + + + + WN++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 388 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 447
+ YA HG E LK+F+ M P+++T +ILTACS++G +EEGL+IF SM ++
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 448 IVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA 507
+ P HY+C +D+L RAGQ+ +A L++SM + LL AC+ + ++ E A
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 508 KQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
K++ + EP N+ +YVL+S+I A +W +VA +R + + PG S IE+ K+
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKK 579
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 173/446 (38%), Gaps = 104/446 (23%)
Query: 150 VACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM 208
V C+ + S+ + +ARK F+ L+ K +N +++GY N LP EA +F EM +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 209 SVSPNVALFLNLISAVSDLRDIRLARS----------------IHGYVLR------HQYI 246
NV + L+S R I AR+ + GY+
Sbjct: 78 ----NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 247 TRVEIANQIIHTYAKCGYLQYARL------------------------------------ 270
R+ N++ T G + R+
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 271 VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGC 330
+F+ MR R++V+WT+MITGY + +D A LF ++ + V+ S+L + G
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGR 249
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
+ +E + K + N++I + + G+++ AR +F M +R +W M+ A
Sbjct: 250 IEDAEEF----FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR------ 444
Y G E L LF M+ ++P + SIL+ C+ ++ G Q+ ++R
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 445 --------EYTIVPGE----------------VHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
+ GE + +N II + G EA + MPS
Sbjct: 366 VYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 481 THS---SAALCTLLSACRLYGDTEIG 503
+ + L +L+AC G E G
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEG 451
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKC 59
MQ Q + P+ +L+S+L A L SLQ GR +H + +R F D+++ + L+ MY KC
Sbjct: 322 MQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKC 379
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G + A VF + +S + WN +I+ Y +G EA ++F +M +P+ +TL
Sbjct: 380 GELVKAKLVFDRF--SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIA 437
Query: 120 AILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
+ +C+ L G I M + V P + + VD+ + V KA ++ E + K
Sbjct: 438 ILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
Query: 178 -DAVIYNVMM 186
DA ++ ++
Sbjct: 498 PDATVWGALL 507
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 240 VLRHQYITRVEIANQI-IHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
+LR Y+T + I ++ G + AR F+ ++ + + SW S+++GY +G E
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLIT 358
A LF + N+ V+ L+ + + + V + + + +++
Sbjct: 67 ARQLFDEMSERNV----VSWNGLVSGYIKNRMIVEARNV----FELMPERNVVSWTAMVK 118
Query: 359 TYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELT 418
Y + G + A LF +M ER SW M G G + KL++ M + ++ +
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----VA 174
Query: 419 FTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
T+++ G V+E IF M RE +V + +I + ++ A L + M
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEM-RERNVVT----WTTMITGYRQNNRVDVARKLFEVM 229
Query: 479 PSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEP 515
P + + ++L L G E E +++ ++P
Sbjct: 230 PE-KTEVSWTSMLLGYTLSGRIEDAEEFF-EVMPMKP 264
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/590 (27%), Positives = 278/590 (47%), Gaps = 41/590 (6%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAA 66
PN T V++L A ++ G IHG ++ GF + +F +L+ +Y K G
Sbjct: 179 PNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF--LNSVFVSNSLMSLYDKDSGSSCDD 236
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCA 125
+ V SWN ++++ + G++ +AF+LF +M + D TL+ + SC
Sbjct: 237 VLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVI--- 181
+ L G+ +HG IR+G+ ++ AL+ YSKF D+ K ++E + +DAV
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 182 ----------------------------YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 213
YN +M G+ +N ++A+ +F +M++ V
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 214 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 273
+ + A + + +++ IHG+ ++ I ++ +C + A +F+
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 274 RMRSR--DLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGC 330
+ S + TS+I GY +G D+A+ LF R L + L +D V+L +L LG
Sbjct: 477 QWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGF 536
Query: 331 LSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGA 390
++HC +A + ++S+ NSLI+ YAKC + A +F M E + SWN+++
Sbjct: 537 REMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISC 596
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC--SHSGLVEEGLQIFRSMIREYTI 448
Y + N E L L++ M IKPD +T T +++A + S + +F SM Y I
Sbjct: 597 YILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDI 656
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAK 508
P HY + +L G L EA + + SMP + L LL +CR++ +T + + +AK
Sbjct: 657 EPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAK 716
Query: 509 QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
IL +P S Y+L SNI + G W IR +++ + P S I
Sbjct: 717 LILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 177/396 (44%), Gaps = 46/396 (11%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKN 192
K++H +++ E + AL+ Y K + A +F L + V Y +++G+ +
Sbjct: 100 KAVHASFLKLREEKTRLG-NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 193 DLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
+L +EA+ VF M K V PN F+ +++A + L IHG +++ ++ V +
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 252 ANQIIHTYAKCGYLQYARL--VFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR- 308
+N ++ Y K + +F+ + RD+ SW ++++ V G +A LF + R
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 309 ENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL------------ 356
E +DS TL +LL + + L +E+H R +ELSVNN+L
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 357 -------------------ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 397
IT Y G ++ A +F +TE+ ++NA++ + +G+
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC 457
+ LKLF M ++ + + TS + AC GLV E + I + I G C
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE--KKVSEQIHGFCIKFGTAFNPC 453
Query: 458 I----IDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
I +D+ +R ++ +A + PS S+ T
Sbjct: 454 IQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT 489
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 186/429 (43%), Gaps = 47/429 (10%)
Query: 52 LLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-- 109
L+ Y K G + A VF ++ +S TV S+ LI+ + +EA ++F +M RK
Sbjct: 120 LISTYLKLGFPREAILVF--VSLSSPTVVSYTALISGFSRLNLEIEALKVFFRM--RKAG 175
Query: 110 -VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKAR 168
V P+ T + +C + G IHG +++ G + +L+ LY K +
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 169 ---KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAV 224
K+F+ + +D +N +++ +K +A ++F+EM ++ + L+S+
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 225 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 284
+D + R +HG +R + + + N +I Y+K ++ ++ M ++D V++T
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 285 SMITGYVHHGHIDEAIILFRLLQRENL----------------------------RIDSV 316
MIT Y+ G +D A+ +F + +N R +
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 317 TLISLLQALSQLGCLSAVK---EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
T SL A+ G +S K ++H + + +L+ +C ++ A +F
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 374 QQMTERCLTS--WNAMLGAYAMHGNYAEVLKLFNHMKLGNIK--PDELTFTSILTACSHS 429
Q +S +++G YA +G + + LF H L K DE++ T IL C
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLF-HRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 430 GLVEEGLQI 438
G E G QI
Sbjct: 535 GFREMGYQI 543
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 117/232 (50%), Gaps = 5/232 (2%)
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
F L+ + D+ + +++H L+ + + + N +I TY K G+ + A LVF +
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLRE-EKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 277 SRDLVSWTSMITGYVHHGHIDEAI-ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 335
S +VS+T++I+G+ EA+ + FR+ + ++ + T +++L A ++ S
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 336 EVHCLTYRAFHGKELSVNNSLITTYAK--CGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
++H L ++ + V+NSL++ Y K + LF ++ +R + SWN ++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 394 HGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
G + LF M ++ D T +++L++C+ S ++ G ++ IR
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
+Q+L+ + V+L +L LG + G IH YA++ G+ D +L+ MY KC
Sbjct: 514 EQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY-FSDISLGNSLISMYAKCCDS 572
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL----- 117
A +F M V SWN LI+ Y+ EA L+ +M +++ PD++TL
Sbjct: 573 DDAIKIFNTMREHD--VISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVIS 630
Query: 118 ------ANAILSCAEL 127
+N + SC +L
Sbjct: 631 AFRYTESNKLSSCRDL 646
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 172/642 (26%), Positives = 291/642 (45%), Gaps = 107/642 (16%)
Query: 26 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 85
L++G H +I+ G + L+++Y K G ++ A VF +M V SWN +
Sbjct: 4 LKDGFLHHIRSIKSG-STLTAVSSNQLVNLYSKSGLLREARNVFDEM--LERNVYSWNAV 60
Query: 86 IAAYLHNGQALEAFELF------RQMI--------------------------HRKVLPD 113
IAAY+ EA ELF R +I HRK D
Sbjct: 61 IAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDD 120
Query: 114 L----LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF------- 162
+ T+ + A+L + +G+ +HG +++ G + A ++L+ +YSK
Sbjct: 121 IWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 163 ---------------------------DVTKARKMFERLRN-KDAVIYNVMMTGYLKNDL 194
D+ KA +F R D + +N ++ GY +N
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 195 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 254
EA+ + M + + + F +++ +S L+ +++ + +H VL++ + +++
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 255 IIHTYAKCGYLQYA-------------------------------RLVFNRMRSRDLVSW 283
I+ Y KCG ++YA + +F+ + ++LV W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 284 TSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
T+M GY++ D + L R + E DS+ ++S+L A S + KE+H +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
R + + + + Y+KCG + A +F ER +NAM+ A HG+ A+ +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
F M G KPDE+TF ++L+AC H GLV EG + F+SMI Y I P HY C+IDL
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 463 SRAGQLTEAYNLVKSMPSTHSSAA-LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 521
+A +L +A L++ + A L L+AC +TE+ + + +++L +E N S Y
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRY 600
Query: 522 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
+ I+N A GRWDE+ IR + KEL+ G S +DKQ
Sbjct: 601 IQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQ 642
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 7/178 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ + +VS+L A + ++ G+ IHG+++R G + D+ T +DMY KCG V+ A
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI-LMDKKLVTAFVDMYSKCGNVEYAER 449
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F T + +N +IA H+G ++F+ F M PD +T + +C
Sbjct: 450 IFDSSFERDTVM--YNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHR 507
Query: 128 DYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK-FDVTKARKMFERLRN--KDAVI 181
+ G+ MI + P+ T ++DLY K + + KA ++ E + KDAVI
Sbjct: 508 GLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVI 565
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 247/469 (52%), Gaps = 2/469 (0%)
Query: 97 EAFELFRQMIHRKVLPDLLTLANAIL-SCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 155
EAFELF + R ++ +A++ +C L + K ++G+M+ G EP+ +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 156 VDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
+ ++ K + AR++F+ + ++ Y +++G++ VEA +F M +
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 274
F ++ A + L I + + +H L+ + ++ +I Y+KCG ++ AR F
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
M + V+W ++I GY HG+ +EA+ L ++ + ID TL +++ ++L L
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
K+ H R E+ N +L+ Y+K G+++ ARY+F ++ + + SWNA++G YA H
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANH 404
Query: 395 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 454
G + +KLF M N+ P+ +TF ++L+AC++SGL E+G +IF SM + I P +H
Sbjct: 405 GRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH 464
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 514
Y C+I+LL R G L EA ++ P + LL+ACR+ + E+G +A+++ +
Sbjct: 465 YACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMG 524
Query: 515 PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
P +YV++ N+ G+ E A + + K L P + +E+ Q
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQ 573
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 201/415 (48%), Gaps = 24/415 (5%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T +L+ A +L S++ + ++G+ + GF ++ +L M+ KCG + A +F +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEP-EQYMMNRILLMHVKCGMIIDARRLFDE 183
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
+ + S+ +I+ +++ G +EAFELF+ M + T A + + A L +
Sbjct: 184 I--PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIY 241
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 190
GK +H +++GV + L+D+YSK D+ AR FE + K V +N ++ GY
Sbjct: 242 VGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA 301
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+ EA+ + ++M VS + +I + L + L + H ++R+ + + +
Sbjct: 302 LHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIV 361
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
++ Y+K G + AR VF+++ ++++SW +++ GY +HG +A+ LF + N
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 311 LRIDSVTLISLLQA-----LSQLG--CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
+ + VT +++L A LS+ G ++ EVH + RA H +I +
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMH------YACMIELLGRD 475
Query: 364 GKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHGN------YAEVLKLFNHMKLGN 411
G L+ A ++ + + + W A+L A M N AE L KLGN
Sbjct: 476 GLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGN 530
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+D + ++ TL ++ + KL L+ + H IR GF + + T L+D Y K G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE-SEIVANTALVDFYSKWG 374
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A VF K+ + SWN L+ Y ++G+ +A +LF +MI V P+ +T
Sbjct: 375 RVDTARYVFDKL--PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAV 432
Query: 121 ILSCA 125
+ +CA
Sbjct: 433 LSACA 437
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 232/458 (50%), Gaps = 40/458 (8%)
Query: 134 KSIHGYMIRMGVE--PDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLK 191
K +H + +R GV+ D++ L+ ++ ARK+F+ +N +YN ++ Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIP-----NLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 192 NDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEI 251
+ P E+I +++ + + P+ F + +A + R R +H R + +
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
+I YAK G L AR VF+ M RD+ W +MITGY G + A+ LF + R+N+
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 312 --------------------------------RIDSVTLISLLQALSQLGCLSAVKEVHC 339
+ + +T++S+L A + LG L + +
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 340 LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMHGNYA 398
+ V N+ I Y+KCG +++A+ LF+++ +R L SWN+M+G+ A HG +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 399 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 458
E L LF M KPD +TF +L AC H G+V +G ++F+SM + I P HY C+
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 459 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 518
IDLL R G+L EAY+L+K+MP + TLL AC +G+ EI E ++ + KLEP N
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 519 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
+ V++SNI A +WD V +R + K + + GYS
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 22/304 (7%)
Query: 14 VSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN 73
+L+ A AKLG+L R + +R V + ++ Y + G +K A +F M
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWN-----AMITGYQRRGDMKAAMELFDSMP 175
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCH 132
+ T SW +I+ + NG EA ++F M K V P+ +T+ + + +CA L L
Sbjct: 176 RKNVT--SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN-KDAVIYNVMMTGYL 190
G+ + GY G ++ C A +++YSK + A+++FE L N ++ +N M+
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD----LRDIRLARSIHGYVLRHQYI 246
+ EA+ +F +M++ P+ F+ L+ A ++ L +S+ H+
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV---HKIS 350
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITGYVHHGHIDEAII---- 301
++E +I + G LQ A + M + D V W +++ HG+++ A I
Sbjct: 351 PKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEA 410
Query: 302 LFRL 305
LF+L
Sbjct: 411 LFKL 414
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 11/191 (5%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCG 60
+D+ + PN +T+VS+L A A LG L+ GR + GYA GF D I+ ++MY KCG
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF--FDNIYVCNATIEMYSKCG 264
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ +A +F ++ + SWN +I + +G+ EA LF QM+ PD +T
Sbjct: 265 MIDVAKRLFEEL-GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGL 323
Query: 121 ILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFDVTKARKMFERLR---- 175
+L+C + G+ + M + + P + ++DL + V K ++ ++ ++
Sbjct: 324 LLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGR--VGKLQEAYDLIKTMPM 381
Query: 176 NKDAVIYNVMM 186
DAV++ ++
Sbjct: 382 KPDAVVWGTLL 392
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 238/463 (51%), Gaps = 35/463 (7%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDL--YSKFDVTKARKMFERLRNKDAVIYNVMMTGYLK 191
K IH +I+ G+ D V + ++ S D+ A +F R+ +K+ ++N ++ G+ +
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 192 NDLPVEAINVFHEMI--KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR------- 242
+ P AI++F +M+ SV P + ++ A L R R +HG V++
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 243 -------HQYIT-----------------RVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
H Y+T V N +I +AKCG + A+ +F+ M R
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 279 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 338
+ VSW SMI+G+V +G +A+ +FR +Q ++++ D T++SLL A + LG + +H
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 339 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 398
R V +LI Y KCG + +F+ ++ L+ WN+M+ A +G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 399 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 458
+ LF+ ++ ++PD ++F +LTAC+HSG V + FR M +Y I P HY +
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 459 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 518
+++L AG L EA L+K+MP + +LLSACR G+ E+ + AK + KL+P +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 519 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
YVL+SN A G ++E R + K+++++ G S IE+D
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 150/327 (45%), Gaps = 39/327 (11%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMY----------- 56
P R+T S+ A +LG ++GR +HG I+ G D T+L MY
Sbjct: 124 PQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED-DSFIRNTMLHMYVTCGCLIEAWR 182
Query: 57 --------------------HKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQAL 96
KCG + A +F +M + SWN +I+ ++ NG+
Sbjct: 183 IFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV--SWNSMISGFVRNGRFK 240
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
+A ++FR+M + V PD T+ + + +CA L G+ IH Y++R E + + TAL+
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 157 DLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 215
D+Y K + + +FE K +N M+ G N A+++F E+ + + P+
Sbjct: 301 DMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSV 360
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYAR-LVF 272
F+ +++A + ++ A +++ +Y+ I + +++ G L+ A L+
Sbjct: 361 SFIGVLTACAHSGEVHRADEFF-RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEA 299
N D V W+S+++ G+++ A
Sbjct: 420 NMPVEEDTVIWSSLLSACRKIGNVEMA 446
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 197/452 (43%), Gaps = 45/452 (9%)
Query: 25 SLQEGRAIHGYAIRRGFGVCDEIFETTLLDMY-HKCGGVKMAAAVFGKMNATSTTVGSWN 83
+++E + IH I+ G + D + + +L + A VF ++N + V WN
Sbjct: 37 TMRELKQIHASLIKTGL-ISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFV--WN 93
Query: 84 PLIAAYLHNGQALEAFELFRQMI--HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+I + + A +F M+ V P LT + + L G+ +HG +I
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 142 RMGVEPD----------MVACTALVDLYS------KFDVT----------------KARK 169
+ G+E D V C L++ + FDV +A+
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 213
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
+F+ + ++ V +N M++G+++N +A+++F EM + V P+ ++L++A + L
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGA 273
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
R IH Y++R+++ + +I Y KCG ++ VF + L W SMI G
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
++G + A+ LF L+R L DSV+ I +L A + G + E L + E
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYM-IE 392
Query: 350 LSVNNS--LITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
S+ + ++ G L A L + M E W+++L A GN +
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 407 MKLGNIKPDELTFTSILT-ACSHSGLVEEGLQ 437
+K + PDE +L+ A + GL EE ++
Sbjct: 453 LK--KLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ++ + P+ T+VSLL+A A LG+ ++GR IH Y +R F + + I T L+DMY KCG
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL-NSIVVTALIDMYCKCG 307
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ VF A + WN +I +NG A +LF ++ + PD ++
Sbjct: 308 CIEEGLNVF--ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 121 ILSCA 125
+ +CA
Sbjct: 366 LTACA 370
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 234/455 (51%), Gaps = 45/455 (9%)
Query: 131 CHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGY 189
CH S+ G +I +P + + L L +F R + D ++N +
Sbjct: 36 CHDNSLFGKLIGHYCSKPSTESSSKLAHLL----------VFPRFGHPDKFLFNTL---- 81
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL---------RDIRLARSIHGYV 240
LK P ++I +F S + L+LN + V L +R+ R +HG V
Sbjct: 82 LKCSKPEDSIRIFANY----ASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMV 137
Query: 241 LRHQYITRVE-IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG----- 294
+ ++ E I ++H YAK G L+YAR VF+ M R V+W +MI GY H
Sbjct: 138 KKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNH 197
Query: 295 HIDEAIILFRLLQ--RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+ +A++LFR +R T++ +L A+SQ G L VH + E+ V
Sbjct: 198 NARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDV 257
Query: 353 --NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
+L+ Y+KCG LN A +F+ M + + +W +M A++G E L N M
Sbjct: 258 FIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAES 317
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
IKP+E+TFTS+L+A H GLVEEG+++F+SM + + P HY CI+DLL +AG++ E
Sbjct: 318 GIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQE 377
Query: 471 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS-------SSYVL 523
AY + +MP + L +L +AC +YG+T +GE I K +L++E + YV
Sbjct: 378 AYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVA 437
Query: 524 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
+SN+LA G+W EV +R K++ +K+ PGYS +
Sbjct: 438 LSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 6 LYPNRVTLVSLL---HAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
LY N T V +L +A +L+ GR +HG + GF E+ TTLL Y K G +
Sbjct: 104 LYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDL 163
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLH-----NGQALEAFELFRQM--IHRKVLPDLL 115
+ A VF +M ++ +WN +I Y N A +A LFR+ V P
Sbjct: 164 RYARKVFDEMPERTSV--TWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDT 221
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEP--DMVACTALVDLYSKFD-VTKARKMFE 172
T+ + + ++ L G +HGY+ ++G P D+ TALVD+YSK + A +FE
Sbjct: 222 TMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFE 281
Query: 173 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
++ K+ + M TG N E N+ + M + + PN F +L+SA
Sbjct: 282 LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/589 (25%), Positives = 279/589 (47%), Gaps = 43/589 (7%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 74
SLL G+ +H + I G D + L+ Y + A + N+
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEF-DSVLVPKLVTFYSAFNLLDEAQTI--TENS 144
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
WN LI +Y+ N + E+ ++++M+ + + D T + I +CA L +G+
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 193
+HG + ++ C AL+ +Y +F V AR++F+R+ +DAV +N ++ Y +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 194 LPVEAINVFHEMIKMSVSPNVALF-----------------------------------L 218
EA + M V ++ + +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRV--EIANQIIHTYAKCGYLQYARLVFNRMR 276
N + A S + ++ + H V+R + + N +I Y++C L++A +VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
+ L +W S+I+G+ ++ +E L + + + +TL S+L +++G L KE
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 337 VHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 395
HC R K+ L + NSL+ YAK G++ A+ +F M +R ++ +++ Y G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 455
L F M IKPD +T ++L+ACSHS LV EG +F M + I HY
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 456 NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE-AIAKQILKLE 514
+C++DL RAG L +A ++ ++P SSA TLL AC ++G+T IGE A K +L+ +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 515 PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
P + Y+L++++ A G W ++ ++ + D ++ ++L+E D +
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE 673
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 200/432 (46%), Gaps = 46/432 (10%)
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAIL--SCAELDYLCHGKSIHGYMIRMGVEP 147
+ +GQ EAF F + ++ + + ++A L +C + G+ +H + I G+E
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 148 DMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 206
D V LV YS F++ +A+ + E + +NV++ Y++N E+++V+ M+
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 207 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 266
+ + + ++I A + L D R +HG + + + + N +I Y + G +
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE----------------- 309
AR +F+RM RD VSW ++I Y + EA F+LL R
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEA---FKLLDRMYLSGVEASIVTWNTIAG 293
Query: 310 ---------------------NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR--AFH 346
N+RI SV +I+ L+A S +G L K HCL R +F
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
+V NSLIT Y++C L A +FQQ+ L++WN+++ +A + E L
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKE 413
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M L P+ +T SIL + G ++ G + ++R + + +N ++D+ +++G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 467 QLTEAYNLVKSM 478
++ A + SM
Sbjct: 474 EIIAAKRVFDSM 485
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR-GFGVCDEIFETTLLDMYHKCGGVKM 64
+PN +TL S+L A++G+LQ G+ H Y +RR + C I +L+DMY K G +
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC-LILWNSLVDMYAKSGEIIA 477
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF M ++ LI Y G+ A F+ M + PD +T+ + +C
Sbjct: 478 AKRVFDSMRKRDKV--TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 125 AELDYLCHG-----KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF 171
+ + + G K H + IR+ +E + +VDLY + + KAR +F
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLE----HYSCMVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/589 (25%), Positives = 279/589 (47%), Gaps = 43/589 (7%)
Query: 15 SLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNA 74
SLL G+ +H + I G D + L+ Y + A + N+
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEF-DSVLVPKLVTFYSAFNLLDEAQTI--TENS 144
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
WN LI +Y+ N + E+ ++++M+ + + D T + I +CA L +G+
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKND 193
+HG + ++ C AL+ +Y +F V AR++F+R+ +DAV +N ++ Y +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 194 LPVEAINVFHEMIKMSVSPNVALF-----------------------------------L 218
EA + M V ++ + +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRV--EIANQIIHTYAKCGYLQYARLVFNRMR 276
N + A S + ++ + H V+R + + N +I Y++C L++A +VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
+ L +W S+I+G+ ++ +E L + + + +TL S+L +++G L KE
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 337 VHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 395
HC R K+ L + NSL+ YAK G++ A+ +F M +R ++ +++ Y G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 455
L F M IKPD +T ++L+ACSHS LV EG +F M + I HY
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 456 NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE-AIAKQILKLE 514
+C++DL RAG L +A ++ ++P SSA TLL AC ++G+T IGE A K +L+ +
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 515 PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
P + Y+L++++ A G W ++ ++ + D ++ ++L+E D +
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE 673
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 200/432 (46%), Gaps = 46/432 (10%)
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAIL--SCAELDYLCHGKSIHGYMIRMGVEP 147
+ +GQ EAF F + ++ + + ++A L +C + G+ +H + I G+E
Sbjct: 57 ISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEF 116
Query: 148 DMVACTALVDLYSKFDV-TKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 206
D V LV YS F++ +A+ + E + +NV++ Y++N E+++V+ M+
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 207 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 266
+ + + ++I A + L D R +HG + + + + N +I Y + G +
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE----------------- 309
AR +F+RM RD VSW ++I Y + EA F+LL R
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEA---FKLLDRMYLSGVEASIVTWNTIAG 293
Query: 310 ---------------------NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR--AFH 346
N+RI SV +I+ L+A S +G L K HCL R +F
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 347 GKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNH 406
+V NSLIT Y++C L A +FQQ+ L++WN+++ +A + E L
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKE 413
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M L P+ +T SIL + G ++ G + ++R + + +N ++D+ +++G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 467 QLTEAYNLVKSM 478
++ A + SM
Sbjct: 474 EIIAAKRVFDSM 485
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRR-GFGVCDEIFETTLLDMYHKCGGVKM 64
+PN +TL S+L A++G+LQ G+ H Y +RR + C I +L+DMY K G +
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC-LILWNSLVDMYAKSGEIIA 477
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
A VF M ++ LI Y G+ A F+ M + PD +T+ + +C
Sbjct: 478 AKRVFDSMRKRDKV--TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 125 AELDYLCHG-----KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF 171
+ + + G K H + IR+ +E + +VDLY + + KAR +F
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLE----HYSCMVDLYCRAGYLDKARDIF 584
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 300/662 (45%), Gaps = 107/662 (16%)
Query: 4 QRLYPNRVT-LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
QR NRV SLL AK G L E R + R C+ +L Y KC +
Sbjct: 70 QRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN-----AMLTGYVKCRRM 124
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP---------- 112
A +F +M V SW ++ A +G++ +A ELF +M R V+
Sbjct: 125 NEAWTLFREM---PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIR 181
Query: 113 --DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-----------PDMVACTALVDLY 159
D+ + D + I GY+ G+E ++V T++V Y
Sbjct: 182 NGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGY 241
Query: 160 SKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM--SVSPNVAL 216
++ DV +A ++F + ++ V + M++G+ N+L EA+ +F EM K +VSPN
Sbjct: 242 CRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 217 FLNLISAVSDL--RDIRLARSIHGYV-----------------LRHQYITRVEIA----- 252
++L A L RL +H V L H Y + IA
Sbjct: 302 LISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 253 ----------NQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGHIDEAII 301
N II+ Y K G L+ A +F R++S D VSWTSMI GY+ G + A
Sbjct: 362 LNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 302 LFRLLQRENLRIDSVTLISLLQA----------------------------LSQLGCLSA 333
LF+ L ++ +V + L+Q LS G S
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 334 V---KEVHCLTYR--AFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAML 388
+ K +HC+ + A + +L + NSL++ YAKCG + A +F +M ++ SWN+M+
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 389 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 448
+ HG + L LF M KP+ +TF +L+ACSHSGL+ GL++F++M Y+I
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAK 508
PG HY +IDLL RAG+L EA + ++P T LL C L + E IA+
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAE 661
Query: 509 ----QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQR 564
++L+L+P N+ +V + N+ A GR D +R K +K TPG S + ++ +
Sbjct: 662 RAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRA 721
Query: 565 EV 566
V
Sbjct: 722 NV 723
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
AR + + + I RV ++ YAK GYL AR++F M R++V+ +M+TGYV
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
++EA LFR + + + V+ +L AL C E + + +
Sbjct: 121 CRRMNEAWTLFREMPK-----NVVSWTVMLTAL----CDDGRSEDAVELFDEMPERNVVS 171
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
N+L+T + G + A+ +F M R + SWNAM+ Y + E LF M N+
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSM 442
+T+TS++ G V E ++F M
Sbjct: 232 ----VTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 244/479 (50%), Gaps = 46/479 (9%)
Query: 124 CAELDYLCHGKSIHGYMIRMGVE--PDMVACTALVDLY-SKFDVTKARKMFER--LRNKD 178
CA +L GK +H + G++ P AL Y S ++ A+K+F+ L KD
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
V + +++ + + L V ++ +F EM + V + + L + L D+ A+ HG
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGY-------------------------------LQY 267
++ +T V++ N ++ Y KCG L+
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 268 ARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI-ILFRLLQRENLRIDSVTLISLLQALS 326
R VF+ M R+ V+WT M+ GY+ G E + +L ++ R ++ VTL S+L A +
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 327 QLGCLSAVKEVH--CLTYRAFHGKELS-----VNNSLITTYAKCGKLNMARYLFQQMTER 379
Q G L + VH L G+E S V +L+ YAKCG ++ + +F+ M +R
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
+ +WNA+ AMHG V+ +F M + +KPD+LTFT++L+ACSHSG+V+EG + F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 440 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 499
S+ R Y + P HY C++DLL RAG + EA L++ MP + L +LL +C ++G
Sbjct: 375 HSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK 433
Query: 500 TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
EI E I ++++++ P N+ +L+SN+ GR D +R + + ++ PG S I
Sbjct: 434 VEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 200/487 (41%), Gaps = 83/487 (17%)
Query: 16 LLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNA 74
LL A L+ G+ +H G + L Y G + A +F ++
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 75 TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
+ W L++++ G + + +LF +M ++V D +++ CA+L+ L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK---------------- 177
HG ++MGV + C AL+D+Y K V++ +++FE L K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 178 ---------------DAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLI 221
+AV + VM+ GYL E + + EM+ + N +++
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 222 SAVSDLRDIRLARSIHGYVLRHQYITRVE-------IANQIIHTYAKCGYLQYARLVFNR 274
SA + ++ + R +H Y L+ + + E + ++ YAKCG + + VF
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
MR R++V+W ++ +G HG I +F + RE ++ D +T ++L A S G +
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVD-- 368
Query: 335 KEVHCLTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 392
+ C F+G E V++ ++ + G + A L ++M
Sbjct: 369 EGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP--------------- 413
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 452
+ P+E+ S+L +CS G VE +I R +I+ + PG
Sbjct: 414 -------------------VPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQ---MSPGN 451
Query: 453 VHYNCII 459
Y ++
Sbjct: 452 TEYQILM 458
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 48/267 (17%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRG----FGVCDEIFETTLLDMY 56
M+ +R+ + V++V L AKL L + HG A++ G VC+ L+DMY
Sbjct: 102 MRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCN-----ALMDMY 156
Query: 57 HKCGGVKMAAAVFGKMNATSTTVGS-----------------------------WNPLIA 87
KCG V +F ++ S + W ++A
Sbjct: 157 GKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVA 216
Query: 88 AYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCHGKSIHGYMIR---- 142
YL G E EL +M+ R + +TL + + +CA+ L G+ +H Y ++
Sbjct: 217 GYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMM 276
Query: 143 MGVEP---DMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
MG E D++ TALVD+Y+K ++ + +F +R ++ V +N + +G +
Sbjct: 277 MGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMV 336
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVS 225
I++F +MI+ V P+ F ++SA S
Sbjct: 337 IDMFPQMIR-EVKPDDLTFTAVLSACS 362
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE------IFETTLLDMYHKCGGV 62
N VTL S+L A A+ G+L GR +H YA+++ + +E + T L+DMY KCG +
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
+ VF M + V +WN L + +G+ ++F QMI R+V PD LT +
Sbjct: 303 DSSMNVFRLMRKRN--VVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLS 359
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
+C+ + G + G+EP + +VDL +
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGR 398
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 247/482 (51%), Gaps = 10/482 (2%)
Query: 79 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 138
V SWN +I+ + G A +LF +M R V+ + N ++D
Sbjct: 97 VVSWNSMISGCVECGDMNTAVKLFDEMPERSVV-SWTAMVNGCFRSGKVD------QAER 149
Query: 139 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVE 197
+M V+ D A ++V Y +F V A K+F+++ K+ + + M+ G +N+ E
Sbjct: 150 LFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 198 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
A+++F M++ + F +I+A ++ + +HG +++ ++ ++ +I
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 258 TYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 317
YA C + +R VF+ + WT++++GY + ++A+ +F + R ++ + T
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 318 LISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT 377
S L + S LG L KE+H + + + V NSL+ Y+ G +N A +F ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 378 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 437
++ + SWN+++ A HG +F M N +PDE+TFT +L+ACSH G +E+G +
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 438 IFRSMIREYTIVPGEV-HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRL 496
+F M + ++ HY C++D+L R G+L EA L++ M + LLSACR+
Sbjct: 449 LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRM 508
Query: 497 YGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
+ D + GE A I L+ ++S++YVL+SNI A GRW V+ +R K + PG S
Sbjct: 509 HSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSS 568
Query: 557 LI 558
+
Sbjct: 569 WV 570
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 198/428 (46%), Gaps = 58/428 (13%)
Query: 127 LDYLCHGKSIHGYMIRMGVEP-DMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVM 185
+ ++ HGK + + + + +++ C L+ + +AR++F ++ + +Y M
Sbjct: 17 ISHVIHGKCYRSFSVTVEFQNREVLICNHLLSR----RIDEAREVFNQVPSPHVSLYTKM 72
Query: 186 MTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDLRDIRLA---------RS 235
+TGY +++ V+A+N+F EM ++ VS N ++IS + D+ A RS
Sbjct: 73 ITGYTRSNRLVDALNLFDEMPVRDVVSWN-----SMISGCVECGDMNTAVKLFDEMPERS 127
Query: 236 IHGYV------LRHQYITRVE------------IANQIIHTYAKCGYLQYARLVFNRMRS 277
+ + R + + E N ++H Y + G + A +F +M
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 278 RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
++++SWT+MI G + EA+ LF+ + R ++ S ++ A + +V
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 338 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNY 397
H L + E V+ SLIT YA C ++ +R +F + + W A+L Y+++ +
Sbjct: 248 HGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKH 307
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVH 454
+ L +F+ M +I P++ TF S L +CS G ++ G ++ ++ E G
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG--- 364
Query: 455 YNCIIDLLSRAGQLTEAYNLV-----KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 509
N ++ + S +G + +A ++ KS+ S +S ++ C +G + I Q
Sbjct: 365 -NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS------IIVGCAQHGRGKWAFVIFGQ 417
Query: 510 ILKL--EP 515
+++L EP
Sbjct: 418 MIRLNKEP 425
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + PN+ T S L++ + LG+L G+ +HG A++ G D +L+ MY G
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET-DAFVGNSLVVMYSDSG 375
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A +VF K+ S SWN +I +G+ AF +F QMI PD +T
Sbjct: 376 NVNDAVSVFIKIFKKSIV--SWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGL 433
Query: 121 ILSCAELDYLCHGKSIHGYM 140
+ +C+ +L G+ + YM
Sbjct: 434 LSACSHCGFLEKGRKLFYYM 453
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 277/543 (51%), Gaps = 45/543 (8%)
Query: 24 GSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 83
G L+ G+ + +G V + + ++++ Y K G + A ++F +M T V +W
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRM--TERNVITWT 243
Query: 84 PLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
+I Y G + F LF +M V + TLA +C + G IHG + R
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR 303
Query: 143 MGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
M +E D+ +L+ +YSK + +A+ +F ++NKD+V +N ++TG ++ EA +
Sbjct: 304 MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYEL 363
Query: 202 FHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK 261
F +M ++ + ++I S +I +K
Sbjct: 364 FEKM----PGKDMVSWTDMIKGFSGKGEI-----------------------------SK 390
Query: 262 CGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLIS 320
C L F M +D ++WT+MI+ +V +G+ +EA+ F ++LQ+E + +S T S
Sbjct: 391 CVEL------FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE-VCPNSYTFSS 443
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
+L A + L L ++H + +LSV NSL++ Y KCG N A +F ++E
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPN 503
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
+ S+N M+ Y+ +G + LKLF+ ++ +P+ +TF ++L+AC H G V+ G + F+
Sbjct: 504 IVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFK 563
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 500
SM Y I PG HY C++DLL R+G L +A NL+ +MP S +LLSA + +
Sbjct: 564 SMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRV 623
Query: 501 EIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
++ E AK++++LEP +++ YV++S + + G+ + I + K K +K PG S I L
Sbjct: 624 DLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIIL 683
Query: 561 DKQ 563
+
Sbjct: 684 KGE 686
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 200/435 (45%), Gaps = 49/435 (11%)
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F + TST + N I+ + NG EA +FRQM +R + ++ I + AE
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSI----VSWIAMISAYAENG 95
Query: 129 YLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMT 187
+ + M +R+ + + TA++ +K D+ KA ++F + K+AV Y M+T
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAM-ITAMIK--NKCDLGKAYELFCDIPEKNAVSYATMIT 152
Query: 188 GYLKNDLPVEAINVFHEM---IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
G+++ EA ++ E + SV+ NV L+S LR + ++ V +
Sbjct: 153 GFVRAGRFDEAEFLYAETPVKFRDSVASNV-----LLSGY--LRAGKWNEAVR--VFQGM 203
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF- 303
+ V + ++H Y K G + AR +F+RM R++++WT+MI GY G ++ LF
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
R+ Q +++++S TL + +A ++H L R +L + NSL++ Y+K
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM---------------- 407
G + A+ +F M + SWN+++ +E +LF M
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFS 383
Query: 408 ---------KLGNIKP--DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 456
+L + P D +T+T++++A +G EE L F M+++ + P ++
Sbjct: 384 GKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK-EVCPNSYTFS 442
Query: 457 CIIDLLSRAGQLTEA 471
++ + L E
Sbjct: 443 SVLSATASLADLIEG 457
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + + PN T S+L A A L L EG IHG ++ V D + +L+ MY KCG
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI-VNDLSVQNSLVSMYCKCG 487
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
A +F + + + S+N +I+ Y +NG +A +LF + P+ +T
Sbjct: 488 NTNDAYKIFSCI--SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 121 ILSCAELDYLCHG----KSIH-GYMIRMGVEPDMVACTALVDLYSK 161
+ +C + Y+ G KS+ Y I G PD AC +VDL +
Sbjct: 546 LSACVHVGYVDLGWKYFKSMKSSYNIEPG--PDHYAC--MVDLLGR 587
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 227/414 (54%), Gaps = 4/414 (0%)
Query: 148 DMVACTALVDLYSKFD--VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 205
++V + LV YSK + + +F + ++ +N+++ + ++ ++I++F M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 206 IKMS-VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGY 264
+ S V P+ ++ A S R+ + IH L+ + + + +++ ++ Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 265 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 324
L +AR +F+ M RD V +T+M GYV G + +FR + +DSV ++SLL A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 325 LSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSW 384
QLG L K VH R L++ N++ Y KC L+ A +F M+ R + SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
++++ Y + G+ KLF+ M I+P+ +TF +L+AC+H GLVE+ FR +++
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFR-LMQ 363
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGE 504
EY IVP HY + D +SRAG L EA ++ MP A + +LS C++YG+ E+GE
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 505 AIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
+A+++++L+PR +S YV ++ + + GR+DE +R K+K++ PG S I
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 182/407 (44%), Gaps = 52/407 (12%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAELDYLCHGKSIHGY 139
SWN +I + +G A ++ +LF +M V PD TL + +C+ G IH
Sbjct: 100 SWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVL 159
Query: 140 MIRMGVEPDMVACTALVDLYSKFDVTK---ARKMFERLRNKDAVIYNVMMTGYLKNDLPV 196
+++G + +ALV +Y D+ K ARK+F+ + +D+V+Y M GY++ +
Sbjct: 160 CLKLGFSSSLFVSSALVIMY--VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAM 217
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
+ +F EM + + + ++L+ A L ++ +S+HG+ +R + + N I
Sbjct: 218 LGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAIT 277
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
Y KC L YA VF M RD++SW+S+I GY G + + LF + +E + ++V
Sbjct: 278 DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAV 337
Query: 317 TLISLLQALSQLGCLSAVKEVHCLTYRAFHG----KELSVNNSLITTYAKCGKLNMARYL 372
T + +L A + G + E L +R EL S+ ++ G L A
Sbjct: 338 TFLGVLSACAHGGLV----EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKF 393
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 432
+ M +KPDE ++L+ C G V
Sbjct: 394 LEDMP----------------------------------VKPDEAVMGAVLSGCKVYGNV 419
Query: 433 EEGLQIFRSMIREYTIVPGEV-HYNCIIDLLSRAGQLTEAYNLVKSM 478
E G ++ R +I+ + P + +Y + L S AG+ EA +L + M
Sbjct: 420 EVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 6/220 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAA 66
P+ TL +L A + + G IH ++ GF +F + L+ MY G + A
Sbjct: 132 PDDFTLPLILRACSASREAKSGDLIHVLCLKLGFS--SSLFVSSALVIMYVDMGKLLHAR 189
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
+F M + + + + Y+ G+A+ +FR+M + D + + + +++C +
Sbjct: 190 KLFDDMPVRDSVL--YTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQ 247
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 185
L L HGKS+HG+ IR + A+ D+Y K + A +F + +D + ++ +
Sbjct: 248 LGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
+ GY + V + +F EM+K + PN FL ++SA +
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA 347
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 169/594 (28%), Positives = 271/594 (45%), Gaps = 93/594 (15%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T++S + + L+E R + R D T++ Y K + A +F K
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPSR-----DSFSWNTMISGYAKNRRIGEALLLFEK 161
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP------DLLT---LANAIL 122
M + SW+ +I + NG+ A LFR+M + P L+ L+ A
Sbjct: 162 MPERNAV--SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 123 SCAELDYLCHGKS---------IHGYMIRMGVE---------PDM--------------- 149
+ L G+ I GY R VE PD+
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 150 --VACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 206
V+ +++ Y K DV AR +F++++++D + +N M+ GY+ +A +F EM
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM- 338
Query: 207 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 266
PN R H + N ++ YA G ++
Sbjct: 339 -----PN--------------------RDAHSW-------------NMMVSGYASVGNVE 360
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
AR F + + VSW S+I Y + EA+ LF + E + D TL SLL A +
Sbjct: 361 LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST 420
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWN 385
L L ++H + + ++ V+N+LIT Y++CG++ +R +F +M +R + +WN
Sbjct: 421 GLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 386 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
AM+G YA HGN +E L LF MK I P +TF S+L AC+H+GLV+E F SM+
Sbjct: 480 AMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV 539
Query: 446 YTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEA 505
Y I P HY+ ++++ S GQ EA ++ SMP LL ACR+Y + +
Sbjct: 540 YKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHV 599
Query: 506 IAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
A+ + +LEP +S+ YVL+ N+ A+ G WDE + +R + K +K G S ++
Sbjct: 600 AAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 37/338 (10%)
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ +AR +FE+L ++ V +N M++GY+K +A +F M K V + +S
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSC 115
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
+R + AR + + + N +I YAK + A L+F +M R+ VSW
Sbjct: 116 -GGIRFLEEARKLFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR 343
++MITG+ +G +D A++LFR + + DS L +L+ L + LS V
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 344 AFHGKE--LSVNNSLITTYAKCGKLNMARYLFQQMTERC---------------LTSWNA 386
G+E + N+LI Y + G++ AR LF Q+ + C + SWN+
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 387 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 446
M+ AY G+ LF+ MK D +++ +++ H +E+ +F M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR- 341
Query: 447 TIVPGEVH-YNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
+ H +N ++ + G + A + + P H+
Sbjct: 342 -----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHT 374
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
N+ ++ + GY+ AR +F ++ +R+ V+W +MI+GYV +++A LF ++ +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
D VT +++ G + ++E L + ++ N++I+ YAK ++ A L
Sbjct: 101 -DVVTWNTMISGYVSCGGIRFLEEARKL-FDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
F++M ER SW+AM+ + +G + LF M + + P
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 250/485 (51%), Gaps = 45/485 (9%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N L ++ + + EL+ +M+ V P T ++ + + + G+S+ ++
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIW 896
Query: 142 RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
+ G + T L+D YS + +ARK+F+ + +D + + M++ Y +
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR--------- 947
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE-IANQIIHTY 259
L++ SA S L +Q + E +N +I+ Y
Sbjct: 948 ----------------VLDMDSANS---------------LANQMSEKNEATSNCLINGY 976
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
G L+ A +FN+M +D++SWT+MI GY + EAI +F + E + D VT+
Sbjct: 977 MGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMS 1036
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
+++ A + LG L KEVH T + ++ + ++L+ Y+KCG L A +F + ++
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
L WN+++ A HG E LK+F M++ ++KP+ +TF S+ TAC+H+GLV+EG +I+
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Query: 440 RSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 499
RSMI +Y+IV HY ++ L S+AG + EA L+ +M ++ LL CR++ +
Sbjct: 1157 RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKN 1216
Query: 500 TEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL-KSTPGYSLI 558
I E +++ LEP NS Y L+ ++ AE RW +VA IR ++ + K PG S I
Sbjct: 1217 LVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
Query: 559 ELDKQ 563
+DK+
Sbjct: 1277 RIDKR 1281
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 5/265 (1%)
Query: 45 DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
+E L++ Y G ++ A ++F +M + SW +I Y N + EA +F +
Sbjct: 965 NEATSNCLINGYMGLGNLEQAESLFNQMPVKD--IISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 105 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-D 163
M+ ++PD +T++ I +CA L L GK +H Y ++ G D+ +ALVD+YSK
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ +A +F L K+ +N ++ G + EA+ +F +M SV PN F+++ +A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 224 VSDLRDIRLARSIH-GYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLV 281
+ + R I+ + + ++ VE ++H ++K G + A L+ N + V
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAV 1202
Query: 282 SWTSMITGYVHHGHIDEAIILFRLL 306
W +++ G H ++ A I F L
Sbjct: 1203 IWGALLDGCRIHKNLVIAEIAFNKL 1227
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 6/191 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M ++ + P+ VT+ +++ A A LG L+ G+ +H Y ++ GF V D + L+DMY KCG
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF-VLDVYIGSALVDMYSKCG 1081
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF N + WN +I +G A EA ++F +M V P+ +T +
Sbjct: 1082 SLERALLVF--FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NK 177
+C + G+ I+ MI + ++ +V L+SK + +A ++ +
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEP 1199
Query: 178 DAVIYNVMMTG 188
+AVI+ ++ G
Sbjct: 1200 NAVIWGALLDG 1210
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 40/248 (16%)
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
NQ I L A +M+ ++ + ++ G+V H ++ L+ + R+++
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELSVNNSLITTYAKCGKLNMARY 371
S T SL++A S + H + FH K + +LI Y+ G++ AR
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVK---IQTTLIDFYSATGRIREARK 925
Query: 372 LFQQMTERCLTSWNAMLGAYAM-------------------------------HGNYAEV 400
+F +M ER +W M+ AY GN +
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
LFN M + +I +++T+++ S + E + +F M+ E I+P EV + +I
Sbjct: 986 ESLFNQMPVKDI----ISWTTMIKGYSQNKRYREAIAVFYKMMEE-GIIPDEVTMSTVIS 1040
Query: 461 LLSRAGQL 468
+ G L
Sbjct: 1041 ACAHLGVL 1048
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 224/425 (52%), Gaps = 33/425 (7%)
Query: 167 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
A ++F ++N + +++N M+ Y P+E+++ F M + + + L+ + S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM 286
L D+R + +HG ++R + +I ++ Y G + A+ VF+ M R++V W M
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 287 ITGYVHHGHIDEAIILFRLL--------------------QRENLRI-----------DS 315
I G+ G ++ + LF+ + RE L + D
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 316 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE-LSVNNSLITTYAKCGKLNMARYLFQ 374
T++++L + LG L K +H + K+ ++V N+L+ Y K G L A +F+
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 375 QMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVE 433
+M R + SWN ++ A++G + LF+ M + G + P+E TF +L CS++G VE
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
G ++F M+ + + HY ++DL+SR+G++TEA+ +K+MP ++A +LLSA
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 494 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 553
CR +GD ++ E A +++K+EP NS +YVL+SN+ AE GRW +V +R + K L+ +
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKST 474
Query: 554 GYSLI 558
G S I
Sbjct: 475 GQSTI 479
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 162/374 (43%), Gaps = 48/374 (12%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N +I Y G LE+ F M R + D T A + SC+ L L GK +HG +I
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 142 RMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTGYL---------- 190
R G +V+LY S + A+K+F+ + ++ V++N+M+ G+
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 191 ---------------------KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
K EA+ +F EMI P+ A + ++ + L
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 230 IRLARSIHGYV----LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 285
+ + IH L +IT + N ++ Y K G L+ A +F +M+ R++VSW +
Sbjct: 250 LDTGKWIHSTAESSGLFKDFIT---VGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNT 306
Query: 286 MITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 344
+I+G +G + I LF +++ + + T + +L S G + +E+ L
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Query: 345 FHGKELSVN-NSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGNY--AEV 400
F + + + +++ ++ G++ A + M + W ++L A HG+ AEV
Sbjct: 367 FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEV 426
Query: 401 LKLFNHMKLGNIKP 414
M+L I+P
Sbjct: 427 AA----MELVKIEP 436
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 35/330 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + ++ + T LL + + L L+ G+ +HG IR GF +I ++++Y G
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI-RIGVVELYTSGG 151
Query: 61 GVKMAAAVFGKMNATSTTVG-----------------------------SWNPLIAAYLH 91
+ A VF +M+ + V SWN +I++
Sbjct: 152 RMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSK 211
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVA 151
G+ EA ELF +MI + PD T+ + A L L GK IH G+ D +
Sbjct: 212 CGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT 271
Query: 152 C-TALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
ALVD Y K D+ A +F +++ ++ V +N +++G N I++F MI+
Sbjct: 272 VGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG 331
Query: 210 -VSPNVALFLNLISAVSDLRDIRLARSIHGYVL-RHQYITRVEIANQIIHTYAKCGYLQY 267
V+PN A FL +++ S + + G ++ R + R E ++ ++ G +
Sbjct: 332 KVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITE 391
Query: 268 A-RLVFNRMRSRDLVSWTSMITGYVHHGHI 296
A + + N + + W S+++ HG +
Sbjct: 392 AFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 23/306 (7%)
Query: 236 IHGYVLRHQYITRVEIANQII-HTYAKCGYL---QYARLVFNRMRSRDLVSWTSMITGYV 291
IH ++LRH + +N ++ H + CG L YA VF+ +++ +++ + +MI Y
Sbjct: 23 IHAHLLRH----FLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 351
G E++ F ++ + D T LL++ S L L K VH R +
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
+ ++ Y G++ A+ +F +M+ER + WN M+ + G+ L LF M +
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
I +++ S++++ S G E L++F MI + P E ++ + + G L
Sbjct: 199 I----VSWNSMISSLSKCGRDREALELFCEMI-DQGFDPDEATVVTVLPISASLGVLDTG 253
Query: 472 YNLVKSMPSTHSSAALCTLLSA-----CRLYGDTEIGEAIAKQILKLEPRNSSSY-VLIS 525
+ + S+ T+ +A C+ GD E AI + K++ RN S+ LIS
Sbjct: 254 KWIHSTAESSGLFKDFITVGNALVDFYCK-SGDLEAATAIFR---KMQRRNVVSWNTLIS 309
Query: 526 NILAEG 531
G
Sbjct: 310 GSAVNG 315
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 221/430 (51%), Gaps = 33/430 (7%)
Query: 167 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM--SVSPNVALFLNLISAV 224
A ++ +R N M+ + K+ +P ++ + + ++ + P+ L+ A
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 225 SDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA------------------------ 260
+ LR +HG +R + + +I YA
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 261 -------KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 313
+CG + +AR +F M RD ++W +MI+GY G EA+ +F L+Q E +++
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
+ V +IS+L A +QLG L + H R + + +L+ YAKCG + A +F
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
M E+ + +W++ L AM+G + L+LF+ MK + P+ +TF S+L CS G V+
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
EG + F SM E+ I P HY C++DL +RAG+L +A ++++ MP +A +LL A
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 494 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 553
R+Y + E+G +K++L+LE N +YVL+SNI A+ WD V+H+R K K ++ P
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 554 GYSLIELDKQ 563
G S++E++ +
Sbjct: 479 GCSVMEVNGE 488
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 173/360 (48%), Gaps = 38/360 (10%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH--RKVLPDLLTLANAILSCAELDYLC 131
+ T+ + N +I A+ + ++F+ +R+++ + PD T+ + +C L
Sbjct: 66 SEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE 125
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF----------------------------- 162
G +HG IR G + D T L+ LY++
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 163 ---DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 219
DV ARK+FE + +D + +N M++GY + EA+NVFH M V N ++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 220 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 279
++SA + L + R H Y+ R++ V +A ++ YAKCG ++ A VF M ++
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 280 LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 339
+ +W+S + G +G ++ + LF L++++ + ++VT +S+L+ S +G + + H
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HF 364
Query: 340 LTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGN 396
+ R G E + + L+ YA+ G+L A + QQM + + W+++L A M+ N
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKN 424
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 139/316 (43%), Gaps = 37/316 (11%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF--------------------GVCD 45
L P+ T+ L+ A L + G +HG IRRGF C
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 46 EIF----------ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQA 95
++F T ++ +CG V A +F M +WN +I+ Y G++
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI--AWNAMISGYAQVGES 221
Query: 96 LEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTAL 155
EA +F M V + + + + + +C +L L G+ H Y+ R ++ + T L
Sbjct: 222 REALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTL 281
Query: 156 VDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
VDLY+K D+ KA ++F + K+ ++ + G N + + +F M + V+PN
Sbjct: 282 VDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNA 341
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVF 272
F++++ S + + + H +R+++ ++ + ++ YA+ G L+ A +
Sbjct: 342 VTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSII 400
Query: 273 NRMRSRDLVS-WTSMI 287
+M + + W+S++
Sbjct: 401 QQMPMKPHAAVWSSLL 416
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 34/248 (13%)
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR--LLQRENLRIDSVTLISL 321
YL YA + +R L + SMI + +++ +R L +L+ D+ T+ L
Sbjct: 55 YLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 322 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA-------------------- 361
+QA + L +VH +T R + V LI+ YA
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 362 -----------KCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
+CG + AR LF+ M ER +WNAM+ YA G E L +F+ M+L
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
+K + + S+L+AC+ G +++G + S I I ++DL ++ G + +
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 471 AYNLVKSM 478
A + M
Sbjct: 294 AMEVFWGM 301
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + + N V ++S+L A +LG+L +GR H Y R + + TTL+D+Y KCG
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRL-ATTLVDLYAKCG 289
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ A VF M V +W+ + NG + ELF M V P+ +T +
Sbjct: 290 DMEKAMEVFWGME--EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSV 347
Query: 121 ILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSK 161
+ C+ + ++ G+ M G+EP + LVDLY++
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYAR 389
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 245/466 (52%), Gaps = 38/466 (8%)
Query: 136 IHGYMIRMGV---EPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKN 192
IH +I +G+ EP + + L S DV A K +L + +N ++ G+ +
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 86
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR---------- 242
P ++I+V+ +M++ + P+ + L+ + S L + +L S+H V++
Sbjct: 87 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFIC 146
Query: 243 ----HQYITRVEIA-----------------NQIIHTYAKCGYLQYARLVFNRMRSRDLV 281
H Y + + A N I+ YAK G + ARLVF+ M RD+V
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 282 SWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
+W+SMI GYV G ++A+ +F ++++ + + + VT++S++ A + LG L+ K VH
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGNYA 398
+ + SLI YAKCG + A +F + + E WNA++G A HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 399 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 458
E L+LF+ M+ I PDE+TF +L ACSH GLV+E F+S+ +E P HY C+
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACM 385
Query: 459 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNS 518
+D+LSRAG + +A++ + MP + + L LL+ C +G+ E+ E + K++++L+P N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 519 SSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQR 564
YV ++N+ A ++ +R + K +K G+S+++LD R
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 38/341 (11%)
Query: 25 SLQEGRAIHGYAIRRGFGVCDEIFETTL-LDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 83
S+ E IH I G + TL G V A K++ WN
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY--GWN 77
Query: 84 PLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM 143
+I + ++ ++ ++ QM+ +LPD +T + S + L G S+H +++
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 144 GVEPDMVACTALVDLYSKF--------------------------------DVTKARKMF 171
G+E D+ C L+ +Y F DV AR +F
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDI 230
+ + +D V ++ M+ GY+K +A+ +F +M++M S N +++I A + L +
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR--MRSRDLVSWTSMIT 288
+++H Y+L V + +I YAKCG + A VF R ++ D + W ++I
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
G HG I E++ LF ++ + D +T + LL A S G
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N VT+VS++ A A LG+L G+ +H Y + + I +T+L+DMY KCG + A +V
Sbjct: 240 NEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLT-VILQTSLIDMYAKCGSIGDAWSV 298
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F + + T WN +I +G E+ +LF +M K+ PD +T + +C+
Sbjct: 299 FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGG 358
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK 166
+ + G EP +VD+ S+ + K
Sbjct: 359 LVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVK 396
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 239/453 (52%), Gaps = 20/453 (4%)
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 178
N I C L L K IH +I +G+ + L+ L S ++ A + ++ N
Sbjct: 14 NLISKCKSLQNL---KQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPS 70
Query: 179 AVIYNVMMTGYLKNDLPVE---AINVFHEMIKMS---VSPNVALFLNLISAVS-DLRDIR 231
+YN +++ + N + A +++ +++ V PN + +L A D + R
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 232 LARSIHGYVLRHQYITRVE----IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 287
R++H +VL+ ++ V + ++ YA CG L+ AR +F R+R DL +W +++
Sbjct: 131 HGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 288 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 347
Y + ID + L R +R + ++L++L+++ + LG V+ V Y +
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLG--EFVRGVWAHVYVLKNN 246
Query: 348 KELS--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
L+ V SLI Y+KCG L+ AR +F +M++R ++ +NAM+ A+HG E ++L+
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
+ + PD TF ++ACSHSGLV+EGLQIF SM Y I P HY C++DLL R+
Sbjct: 307 SLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRS 366
Query: 466 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 525
G+L EA +K MP ++ + L + + +GD E GE K +L LE NS +YVL+S
Sbjct: 367 GRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLS 426
Query: 526 NILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
NI A RW +V R + KD + +PG S +
Sbjct: 427 NIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 19/310 (6%)
Query: 8 PNRVTLVSLLHAAAKLGSL-QEGRAIHGYAIRRGFGVC-DEIFETTLLDMYHKCGGVKMA 65
PN T SL A+ + GRA+H + ++ V D + L+ Y CG ++ A
Sbjct: 110 PNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREA 169
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
++F ++ + +WN L+AAY ++ + E+ + +V P+ L+L I SCA
Sbjct: 170 RSLFERIREPD--LATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCA 227
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNV 184
L G H Y+++ + + T+L+DLYSK ++ ARK+F+ + +D YN
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS-------DLRDIRLARSIH 237
M+ G + E I ++ +I + P+ A F+ ISA S L+ ++++
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHI 296
G +VE ++ + G L+ A +M + + W S + HG
Sbjct: 348 GIE------PKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDF 401
Query: 297 DEAIILFRLL 306
+ I + L
Sbjct: 402 ERGEIALKHL 411
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 240/477 (50%), Gaps = 2/477 (0%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
WN +I AY Q LF Q++ PD T A +E + IHG I
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAI 133
Query: 142 RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAIN 200
G+ D + +A+V YSK + +A K+F + + D ++NVM+ GY + IN
Sbjct: 134 VSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGIN 193
Query: 201 VFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
+F+ M PN + L S + D + +A S+H + L+ + + +++ Y+
Sbjct: 194 LFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYS 253
Query: 261 KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 320
+C + A VFN + DLV+ +S+ITGY G+ EA+ LF L+ + D V +
Sbjct: 254 RCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI 313
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
+L + ++L + KEVH R ++ V ++LI Y+KCG L A LF + E+
Sbjct: 314 VLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKN 373
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
+ S+N+++ +HG + + F + + PDE+TF+++L C HSGL+ +G +IF
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFE 433
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDT 500
M E+ I P HY ++ L+ AG+L EA+ V S+ S L LLS C ++ +T
Sbjct: 434 RMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENT 493
Query: 501 EIGEAIAKQILK-LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
+ E +A+ I K E R S V++SN+ A GRWDEV +R + PG S
Sbjct: 494 HLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 4/331 (1%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T L ++ + R IHG AI G G D+I + ++ Y K G + A+
Sbjct: 104 PDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF-DQICGSAIVKAYSKAGLIVEASK 162
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F + + WN +I Y G + LF M HR P+ T+ +
Sbjct: 163 LFCSI--PDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDP 220
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMM 186
L S+H + +++ ++ ALV++YS+ + A +F + D V + ++
Sbjct: 221 SLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLI 280
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI 246
TGY + EA+++F E+ P+ L ++ + ++L D + +H YV+R
Sbjct: 281 TGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLE 340
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL 306
+++ + +I Y+KCG L+ A +F + +++VS+ S+I G HG A F +
Sbjct: 341 LDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEI 400
Query: 307 QRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
L D +T +LL G L+ +E+
Sbjct: 401 LEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 115/267 (43%), Gaps = 11/267 (4%)
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHH 293
+ +H +V + + A Q+ YA L AR +F+ R + W S+I Y
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
+ LF + R + R D+ T L + S+ ++ +H + + G +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
++++ Y+K G + A LF + + L WN M+ Y G + + + LFN M+ +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI---VPGEVHYNC-IIDLLSRAGQLT 469
P+ T ++ SGL++ L + + + + + + C ++++ SR +
Sbjct: 205 PNCYTMVALT-----SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 470 EAYNLVKSM--PSTHSSAALCTLLSAC 494
A ++ S+ P + ++L T S C
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRC 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ V + +L + A+L G+ +H Y IR G + D + L+DMY KCG +K A +
Sbjct: 306 PDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLEL-DIKVCSALIDMYSKCGLLKCAMS 364
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
+F + + S+N LI +G A AFE F +++ ++PD +T + + +C
Sbjct: 365 LFAGI--PEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHS 422
Query: 128 DYLCHGKSIHGYM-IRMGVEP 147
L G+ I M G+EP
Sbjct: 423 GLLNKGQEIFERMKSEFGIEP 443
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 278/550 (50%), Gaps = 8/550 (1%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T S+L + +EG +H I GFG C+ + L+ +Y V +A +F +
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFG-CNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
M + V N L+ + G++ FE++ +M V + LT I C+ +
Sbjct: 173 MLDRNLAV--CNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVY 230
Query: 132 HGKSIHGYMIRMGVE-PDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGY 189
GK +H +++ G ++ LVD YS D++ + + F + KD + +N +++
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY-ITR 248
++++++F +M P++ F++ ++ S DI+ + IH YVL+ + ++
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
+ + + +I Y KC ++ + L++ + +L S++T +H G + I +F L+
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 309 ENLRIDSVTLISLLQALSQ--LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKL 366
E ID VTL ++L+ALS L + VHC ++ + +++V+ SLI Y K G+
Sbjct: 411 EGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQN 470
Query: 367 NMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
++R +F ++ + +++ YA +G + +K+ M N+ PDE+T S+L+ C
Sbjct: 471 EVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC 530
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
SHSGLVEEG IF S+ +Y I PG Y C++DLL RAG + +A L+ A
Sbjct: 531 SHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVA 590
Query: 487 LCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKD 546
+LL +CR++ + IG A+ ++ LEP N + Y+ +S E G ++ IR +
Sbjct: 591 WSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAAS 650
Query: 547 KELKSTPGYS 556
+EL GYS
Sbjct: 651 RELMREIGYS 660
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 179/380 (47%), Gaps = 5/380 (1%)
Query: 53 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 112
+D K G + A F +M+ V ++N LI+ G +L A EL+ +M+ +
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRD--VVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRE 110
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMF 171
T + + C++ + G +H +I +G +M +ALV LY+ V A K+F
Sbjct: 111 SASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLF 170
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
+ + +++ + N+++ + + V+ M V+ N + +I S R +
Sbjct: 171 DEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVY 230
Query: 232 LARSIHGYVLRHQY-ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 290
+ +H V++ + I+ + +AN ++ Y+ CG L + FN + +D++SW S+++
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 291 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKE 349
+G + +++ LF +Q R +S L S+ + + K++HC + F
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 350 LSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL 409
L V ++LI Y KC + + L+Q + L N+++ + G +++++F M
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 410 GNIKPDELTFTSILTACSHS 429
DE+T +++L A S S
Sbjct: 411 EGTGIDEVTLSTVLKALSLS 430
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 182/411 (44%), Gaps = 26/411 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + N +T ++ + + EG+ +H ++ G+ + + L+D Y CG
Sbjct: 204 MELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACG 263
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ + F + V SWN +++ G L++ +LF +M P + +
Sbjct: 264 DLSGSMRSFNAV--PEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACTALVDLYSKFD-VTKARKMFERLRNKD 178
+ C+ + GK IH Y+++MG + + +AL+D+Y K + + + +++ L +
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLN 381
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
N +MT + + + I +F MI + ++ A+S + L S+H
Sbjct: 382 LECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHS 437
Query: 239 YVLRH------QYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
L H Y V ++ +I Y K G + +R VF+ + + ++ TS+I GY
Sbjct: 438 CTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYAR 497
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL------TYRAFH 346
+G + + + R + R NL D VT++S+L S G V+E + Y
Sbjct: 498 NGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG---LVEEGELIFDSLESKYGISP 554
Query: 347 GKELSVNNSLITTYAKCGKLNMA-RYLFQQMTERCLTSWNAMLGAYAMHGN 396
G++L ++ + G + A R L Q + +W+++L + +H N
Sbjct: 555 GRKLYA--CMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRN 603
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 151/324 (46%), Gaps = 1/324 (0%)
Query: 157 DLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
+L ++ A + F+ + +D V YN++++G + + AI ++ EM+ + + +
Sbjct: 55 ELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAST 114
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
F +++S SD R +H V+ + + + + ++ YA + A +F+ M
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML 174
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
R+L ++ + G ++ ++ E + + +T +++ S + K+
Sbjct: 175 DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQ 234
Query: 337 VHCLTYRA-FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHG 395
+H L ++ ++ + V N L+ Y+ CG L+ + F + E+ + SWN+++ A +G
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 396 NYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHY 455
+ + L LF+ M+ +P F S L CS + ++ G QI +++ V
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 456 NCIIDLLSRAGQLTEAYNLVKSMP 479
+ +ID+ + + + L +S+P
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLP 378
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 3/247 (1%)
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
N+ I K G L A F+ M RD+V++ +I+G +G AI L+ + LR
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 313 IDSVTLISLLQALS-QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
+ T S+L S +L C + +VHC G + V ++L+ YA +++A
Sbjct: 110 ESASTFPSVLSVCSDELFCREGI-QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 372 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 431
LF +M +R L N +L + G + +++ M+L + + LT+ ++ CSH L
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 491
V EG Q+ +++ + N ++D S G L+ + ++P + +++
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE-KDVISWNSIV 287
Query: 492 SACRLYG 498
S C YG
Sbjct: 288 SVCADYG 294
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 191/335 (57%), Gaps = 2/335 (0%)
Query: 228 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 287
RD R H L+ +I+ V + + ++ Y G ++ A VF M R++VSWT+MI
Sbjct: 134 RDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMI 193
Query: 288 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 347
+G+ +D + L+ +++ + T +LL A + G L + VHC T
Sbjct: 194 SGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN-H 406
L ++NSLI+ Y KCG L A +F Q + + + SWN+M+ YA HG + ++LF
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M KPD +T+ +L++C H+GLV+EG + F +++ E+ + P HY+C++DLL R G
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-NLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 467 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISN 526
L EA L+++MP +S +LL +CR++GD G A++ L LEP ++++V ++N
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLAN 432
Query: 527 ILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+ A G W E A +R + KDK LK+ PG S IE++
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 7/289 (2%)
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMF 171
D L++A+ SC G H ++ G D+ ++LV LY +V A K+F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
E + ++ V + M++G+ + + ++ +M K + PN F L+SA + +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYV 291
RS+H L + + I+N +I Y KCG L+ A +F++ ++D+VSW SMI GY
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 292 HHGHIDEAIILFRL-LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--K 348
HG +AI LF L + + + D++T + +L + G + ++ L A HG
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM--AEHGLKP 356
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAMLGAYAMHGN 396
EL+ + L+ + G L A L + M + + W ++L + +HG+
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 126/278 (45%), Gaps = 6/278 (2%)
Query: 26 LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPL 85
+ G H A++ GF + D ++L+ +Y G V+ A VF +M V SW +
Sbjct: 136 FRTGSGFHCLALKGGF-ISDVYLGSSLVVLYRDSGEVENAYKVFEEM--PERNVVSWTAM 192
Query: 86 IAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGV 145
I+ + + +L+ +M P+ T + +C L G+S+H + MG+
Sbjct: 193 ISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGL 252
Query: 146 EPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
+ + +L+ +Y K D+ A ++F++ NKD V +N M+ GY ++ L ++AI +F
Sbjct: 253 KSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFEL 312
Query: 205 MI-KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
M+ K P+ +L ++S+ ++ R + H + + ++ + G
Sbjct: 313 MMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFG 372
Query: 264 YLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
LQ A L+ N + V W S++ HG + I
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN T +LL A G+L +GR++H + G I +L+ MY KCG +K A
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI-SNSLISMYCKCGDLKDAFR 277
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK-VLPDLLTLANAILSCAE 126
+F + ++ V SWN +IA Y +G A++A ELF M+ + PD +T + SC
Sbjct: 278 IFDQF--SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-DAVIYNV 184
+ G+ M G++P++ + LVDL +F + +A ++ E + K ++VI+
Sbjct: 336 AGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGS 395
Query: 185 MM 186
++
Sbjct: 396 LL 397
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 260/523 (49%), Gaps = 42/523 (8%)
Query: 30 RAIHGYAIRRGF-GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 88
R +H ++ G+ G D ET+++D+Y KC + A VF ++ S SWN ++
Sbjct: 182 RQLHCAVVKYGYSGNVD--LETSIVDVYGKCRVMSDARRVFDEIVNPSDV--SWNVIVRR 237
Query: 89 YLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 148
YL G EA +F +M+ V P T+++ +L+C+ L GK IH +++ V D
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 149 MVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK 207
V T++ D+Y K D + AR++F++ R+KD + M+GY + L EA +F M +
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 208 MS-VSPNVAL--------------FLNL----------------ISAVSDLRDIRLARSI 236
+ VS N L FL L ++ S + D+++ +
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS-RDLVSWTSMITGYVHHGH 295
HG++ RH Y T V +AN ++ Y KCG LQ A + F +M RD VSW +++TG G
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNS 355
++A+ F +Q E + TL +LL + + L+ K +H R + ++ + +
Sbjct: 478 SEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGA 536
Query: 356 LITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
++ Y+KC + A +F++ R L WN+++ +G EV +LF ++ +KPD
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 416 ELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLV 475
+TF IL AC G VE G Q F SM +Y I P HY+C+I+L + G L + +
Sbjct: 597 HVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL 656
Query: 476 KSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK---LEP 515
MP L + AC+ Y +++G AK+++ L+P
Sbjct: 657 LLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 205/426 (48%), Gaps = 36/426 (8%)
Query: 53 LDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 112
++ Y KCG V A +F +M GSWN +I A NG + E F +FR+M V
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDG--GSWNAVITACAQNGVSDEVFRMFRRMNRDGVRA 160
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMF 171
+ A + SC + L + +H +++ G ++ T++VD+Y K V + AR++F
Sbjct: 161 TETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVF 220
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
+ + N V +NV++ YL+ EA+ +F +M++++V P +++ A S +
Sbjct: 221 DEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALE 280
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS------ 285
+ + IH ++ + ++ + Y KC L+ AR VF++ RS+DL SWTS
Sbjct: 281 VGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYA 340
Query: 286 -------------------------MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLIS 320
M+ GYVH DEA+ L+++E ID+VTL+
Sbjct: 341 MSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVW 400
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE-R 379
+L S + + K+ H YR + + V N+L+ Y KCG L A F+QM+E R
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 380 CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
SWNA+L A G + L F M++ KP + T ++L C++ + G I
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIH 519
Query: 440 RSMIRE 445
+IR+
Sbjct: 520 GFLIRD 525
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 172/415 (41%), Gaps = 41/415 (9%)
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVI 181
SC+ + + + +++ P + ++ Y K V AR++FE + +D
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGS 129
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+N ++T +N + E +F M + V F ++ + + D+RL R +H V+
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAII 301
++ Y V++ I+ Y KC + AR VF+ + + VSW ++ Y+ G DEA++
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVV 249
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
+F + N+R + T+ S++ A S+ L K +H + + + V+ S+ Y
Sbjct: 250 MFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 362 KCGKLNMARYLFQQ-------------------------------MTERCLTSWNAMLGA 390
KC +L AR +F Q M ER + SWNAMLG
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGG 369
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ----IFRSMIREY 446
Y + E L M+ D +T IL CS V+ G Q I+R
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 501
IV N ++D+ + G L A + M + LL+ G +E
Sbjct: 430 VIVA-----NALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE 479
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
+ VTLV +L+ + + +Q G+ HG+ R G+ + I LLDMY KCG ++ A
Sbjct: 394 DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDT-NVIVANALLDMYGKCGTLQSANIW 452
Query: 69 FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
F +M+ V SWN L+ G++ +A F M + P TLA + CA +
Sbjct: 453 FRQMSELRDEV-SWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIP 510
Query: 129 YLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIYNVM 185
L GK+IHG++IR G + D+V A+VD+YSK FD A ++F+ +D +++N +
Sbjct: 511 ALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDY--AIEVFKEAATRDLILWNSI 568
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ G +N E +F + V P+ FL ++ A IR G+
Sbjct: 569 IRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC-----IREGHVELGFQYFSSM 623
Query: 246 ITRVEIANQIIH 257
T+ I+ Q+ H
Sbjct: 624 STKYHISPQVEH 635
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 176/407 (43%), Gaps = 22/407 (5%)
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV--------EAINVFHEMIKMSVSPNVA 215
VT F RL +D V+ TG L V E NV + + SP
Sbjct: 3 VTGVSSAFGRLFKQDKTHKRVIGTG---TKLTVTRQILEHLEGGNVSKAVSVLFASPEPV 59
Query: 216 ---LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
L+ L + S + AR + +++ + + + N+ I Y KCG + AR +F
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELF 119
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 332
M RD SW ++IT +G DE +FR + R+ +R + +L++ + L
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR 179
Query: 333 AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYA 392
++++HC + + + + S++ Y KC ++ AR +F ++ SWN ++ Y
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 452
G E + +F M N++P T +S++ ACS S +E G ++ ++ + ++V
Sbjct: 240 EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADT 298
Query: 453 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 512
V + D+ + +L A + S L + SA Y + + A+++
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQT----RSKDLKSWTSAMSGYAMSGLTRE-ARELFD 353
Query: 513 LEP-RNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
L P RN S+ + WDE + + +E+++ +L+
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR-QEIENIDNVTLV 399
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P++ TL +LL A + +L G+AIHG+ IR G+ + D + ++DMY KC A
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI-DVVIRGAMVDMYSKCRCFDYAIE 552
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + A + + WN +I NG++ E FELF + + V PD +T + +C
Sbjct: 553 VFKE--AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIRE 610
Query: 128 DYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSKF 162
++ G M + + P + +++LY K+
Sbjct: 611 GHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 218/414 (52%), Gaps = 8/414 (1%)
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 194
+H +++G D LV Y K ++ ARK+F+ + + V + +++GY
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 195 PVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
P A+++F +M + V PN F ++ A S L + R+ ++IH + + +++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 254 QIIHTYAKCGYLQYARLVFNRM--RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE-- 309
++ Y KC ++ AR VF+ M R++VSWTSMIT Y + EAI LFR
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 310 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 369
+ R + L S++ A S LG L K H L R + V SL+ YAKCG L+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 370 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
+F ++ + S+ +M+ A A HG +KLF+ M G I P+ +T +L ACSHS
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC- 488
GLV EGL+ M +Y +VP HY C++D+L R G++ EAY L K++ AL
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 489 -TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 541
LLSA RL+G EI +K++++ + +S+Y+ +SN A G W++ +R
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHG----YAIRRGFGVCDEIFETTLLDMYH 57
+D+ + PN T S+ A + L + G+ IH +RR + ++L+DMY
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNI-----VVSSSLVDMYG 177
Query: 58 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD---L 114
KC V+ A VF M V SW +I AY N + EA ELFR + + D
Sbjct: 178 KCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQ 236
Query: 115 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 173
LA+ I +C+ L L GK HG + R G E + V T+L+D+Y+K ++ A K+F R
Sbjct: 237 FMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR 296
Query: 174 LRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
+R + Y M+ K+ L A+ +F EM+ ++PN L ++ A S
Sbjct: 297 IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 138/294 (46%), Gaps = 10/294 (3%)
Query: 220 LISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 279
L+ +S+ + +H L+ + + N ++ +Y K + AR +F+ M +
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 280 LVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVH 338
+VSWTS+I+GY G A+ +F+ + + + + T S+ +A S L K +H
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
Query: 339 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT--ERCLTSWNAMLGAYAMHGN 396
+ + + V++SL+ Y KC + AR +F M R + SW +M+ AYA +
Sbjct: 155 ARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNAR 214
Query: 397 YAEVLKLFNHMK--LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 454
E ++LF L + + ++ S+++ACS G ++ G ++ ++ V
Sbjct: 215 GHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVV 273
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAK 508
++D+ ++ G L+ A + + HS + +++ A +G +GEA K
Sbjct: 274 ATSLLDMYAKCGSLSCAEKIFLRI-RCHSVISYTSMIMAKAKHG---LGEAAVK 323
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 213/390 (54%), Gaps = 16/390 (4%)
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMS---VSPNVALFLNLISAVSDLRDIRLARSIHGY 239
N + YL++ P++A+ F + S V LF +S+ + R IH
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRDLVSWTSMITGYVHHGHIDE 298
V + + ++I ++ Y+ G + YAR VF+ +++V WT+MI+ Y + + E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH--GKELSVNNSL 356
AI LF+ ++ E + +D V + L A + LG + +E++ + + +L++ NSL
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN----- 411
+ Y K G+ AR LF + + +T++ +M+ YA++G E L+LF MK +
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 412 -IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
I P+++TF +L ACSHSGLVEEG + F+SMI +Y + P E H+ C++DL R+G L +
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 471 AYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAE 530
A+ + MP ++ TLL AC L+G+ E+GE + ++I +L+ + YV +SNI A
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 531 GGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
G WDE + +R + + + PG S IEL
Sbjct: 391 KGMWDEKSKMRDRVRKRRM---PGKSWIEL 417
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 17/308 (5%)
Query: 5 RLYPNRVTLVSLLHA----AAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
R P+ V S+L A +A+ S +GR IH + GF +I +T+L+ Y G
Sbjct: 56 RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQI-QTSLVGFYSSVG 114
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A VF + V W +I+AY N ++EA ELF++M K+ D + + A
Sbjct: 115 DVDYARQVFDETPEKQNIV-LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 121 ILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVDLYSKFDVT-KARKMFERLRNK 177
+ +CA+L + G+ I+ I+ + D+ +L+++Y K T KARK+F+ K
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS------VSPNVALFLNLISAVSDLRDIR 231
D Y M+ GY N E++ +F +M + ++PN F+ ++ A S +
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 232 LA-RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-DLVSWTSMITG 289
R ++ + R ++ + + G+L+ A N+M + + V W +++
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 290 YVHHGHID 297
HG+++
Sbjct: 354 CSLHGNVE 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 52/299 (17%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC-DEIFETTLLDMYHKC 59
M+ +++ + V + L A A LG++Q G I+ +I+R + D +LL+MY K
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM--IHRK----VLPD 113
G + A +F + + V ++ +I Y NGQA E+ ELF++M I + + P+
Sbjct: 218 GETEKARKLFDE--SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPN 275
Query: 114 LLTLANAILSCAELDYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFDVTKARKMFE 172
+T +++C+ + GK MI ++P +VDL+ +
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR----------- 324
Query: 173 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIR 231
+G+LK+ HE I +M + PN ++ L+ A S ++
Sbjct: 325 --------------SGHLKDA---------HEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
Query: 232 LARSIHGYVLRHQYITRVEIANQII--HTYAKCGYLQYARLVFNRMRSRDLV--SWTSM 286
L + + + R + + + + YA G + +R+R R + SW +
Sbjct: 362 LGEEVQRRIFE---LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIEL 417
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 216/408 (52%), Gaps = 15/408 (3%)
Query: 163 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
D+ + ++F + N N M+ + + P E +F S+ N +L N +S
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFR-----SLRRNSSLPANPLS 115
Query: 223 AVSDLR------DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
+ L+ D+ IHG + +++ + ++ Y+ C A VF+ +
Sbjct: 116 SSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP 175
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE---NLRIDSVTLISLLQALSQLGCLSA 333
RD VSW + + Y+ + + ++LF ++ + ++ D VT + LQA + LG L
Sbjct: 176 KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 334 VKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAM 393
K+VH L+++N+L++ Y++CG ++ A +F M ER + SW A++ AM
Sbjct: 236 GKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM 295
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR-EYTIVPGE 452
+G E ++ FN M I P+E T T +L+ACSHSGLV EG+ F M E+ I P
Sbjct: 296 NGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNL 355
Query: 453 VHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK 512
HY C++DLL RA L +AY+L+KSM S TLL ACR++GD E+GE + +++
Sbjct: 356 HHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
Query: 513 LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIEL 560
L+ + YVL+ N + G+W++V +R++ K+K + + PG S IEL
Sbjct: 416 LKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIEL 463
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 183/389 (47%), Gaps = 22/389 (5%)
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCHGKSI 136
T+ N +I A+ + E F LFR + LP + L+ + A+ C + L G I
Sbjct: 76 TLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQI 135
Query: 137 HGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLP 195
HG + G D + T L+DLYS + T A K+F+ + +D V +NV+ + YL+N
Sbjct: 136 HGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRT 195
Query: 196 VEAINVFHEM---IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
+ + +F +M + V P+ L + A ++L + + +H ++ + + ++
Sbjct: 196 RDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLS 255
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
N ++ Y++CG + A VF MR R++VSWT++I+G +G EAI F + + +
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL------ITTYAKCGKL 366
+ TL LL A S G ++ + + E + +L + + L
Sbjct: 316 PEEQTLTGLLSACSHSGLVAE----GMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 367 NMARYLFQQMTERC-LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL-TFTSILT 424
+ A L + M + T W +LGA +HG+ ++ +H L +K +E + +L
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISH--LIELKAEEAGDYVLLLN 429
Query: 425 ACSHSGLVEEGLQIFRSMIREYTI--VPG 451
S G E+ ++ RS+++E I PG
Sbjct: 430 TYSTVGKWEKVTEL-RSLMKEKRIHTKPG 457
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 7/228 (3%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
++ L N ++ L K G L G IHG GF + D + TTL+D+Y C
Sbjct: 105 RNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGF-LSDSLLMTTLMDLYSTCEN 163
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQM---IHRKVLPDLLTLA 118
A VF ++ T SWN L + YL N + + LF +M + V PD +T
Sbjct: 164 STDACKVFDEIPKRDTV--SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCL 221
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
A+ +CA L L GK +H ++ G+ + LV +YS+ + KA ++F +R +
Sbjct: 222 LALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER 281
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
+ V + +++G N EAI F+EM+K +SP L+SA S
Sbjct: 282 NVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACS 329
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 247/500 (49%), Gaps = 7/500 (1%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
TL+ Y K G + A +F +M V SWN LI+ ++ G A E +M
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRM--PQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREG 233
Query: 110 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKAR 168
++ D L + +C+ L GK +H +++ G+E A +AL+D+YS + A
Sbjct: 234 LVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA 293
Query: 169 KMFERLR---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS 225
+F + + N ++N M++G+L N+ A+ + ++ + + + +
Sbjct: 294 DVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 226 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 285
+ ++RL +H V+ Y + + ++ +A G +Q A +F+R+ ++D+++++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
+I G V G A LFR L + L D + ++L+ S L L K++H L +
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFN 405
+ E +L+ Y KCG+++ LF M ER + SW ++ + +G E + F+
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRA 465
M I+P+++TF +L+AC HSGL+EE +M EY + P HY C++DLL +A
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 466 GQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLIS 525
G EA L+ MP +LL+AC + + + IA+++LK P + S Y +S
Sbjct: 594 GLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653
Query: 526 NILAEGGRWDEVAHIRAMTK 545
N A G WD+++ +R K
Sbjct: 654 NAYATLGMWDQLSKVREAAK 673
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 204/439 (46%), Gaps = 8/439 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + L + L L A + G L G+ +H ++ G + L+DMY CG
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE-SSPFAISALIDMYSNCG 287
Query: 61 GVKMAAAVFGKMN-ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
+ AA VF + A +++V WN +++ +L N + A L Q+ + D TL+
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSG 347
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
A+ C L G +H ++ G E D + + LVDL++ ++ A K+F RL NKD
Sbjct: 348 ALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKD 407
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ ++ ++ G +K+ A +F E+IK+ + + + N++ S L + + IHG
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDE 298
++ Y + A ++ Y KCG + ++F+ M RD+VSWT +I G+ +G ++E
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE 527
Query: 299 AIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN--SL 356
A F + + + VT + LL A G L + T ++ +G E + + +
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARST-LETMKSEYGLEPYLEHYYCV 586
Query: 357 ITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPD 415
+ + G A L +M E T W ++L A H N A ++ + L D
Sbjct: 587 VDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKN-AGLVTVIAEKLLKGFPDD 645
Query: 416 ELTFTSILTACSHSGLVEE 434
+TS+ A + G+ ++
Sbjct: 646 PSVYTSLSNAYATLGMWDQ 664
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 198/455 (43%), Gaps = 47/455 (10%)
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDV-TKARKMF 171
DL +A + C ++ G+SI ++I+ G+ ++ ++ +Y F + + A K+F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 172 ERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV-SPNVALFLNLISAVSDLRDI 230
+ + ++ V + M++GY + P +AI ++ M+ + N ++ ++ A + DI
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 290
+L ++ + + V + N ++ Y K G L A F + SW ++I+GY
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 291 VHHGHIDEAIILF-RL-----------------------------LQRENLRIDSVTLIS 320
G +DEA+ LF R+ +QRE L +D L
Sbjct: 184 CKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPC 243
Query: 321 LLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ---MT 377
L+A S G L+ K++HC ++ ++LI Y+ CG L A +F Q
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 378 ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQ 437
+ WN+ML + ++ L L + ++ D T + L C + + GLQ
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 438 IFRSMIREYTIVPG-EVHY---NCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
+ +V G E+ Y + ++DL + G + +A+ L +P+ A L+
Sbjct: 364 -----VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRG 417
Query: 494 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNIL 528
C G + + ++++KL + ++SNIL
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGL--DADQFIVSNIL 450
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/504 (21%), Positives = 218/504 (43%), Gaps = 53/504 (10%)
Query: 17 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF-ETTLLDMYHKCGGVKMAAAVFGKMNAT 75
L K+ + + G +I + I++G + +F ++ MY + A VF +M +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQG--ISQNVFIANNVISMYVDFRLLSDAHKVFDEM--S 67
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL-SCAELDYLCHGK 134
+ +W +++ Y +G+ +A EL+R+M+ + + +A+L +C + + G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND 193
++ + + + D+V ++VD+Y K + +A F+ + + +N +++GY K
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR---------------------- 231
L EA+ +FH M + PNV + LIS D R
Sbjct: 188 LMDEAVTLFHRMPQ----PNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPC 243
Query: 232 ------------LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR--- 276
+ + +H V++ + + +I Y+ CG L YA VF++ +
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
+ + W SM++G++ + + A+ L + + +L DS TL L+ L +
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 337 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGN 396
VH L + + + V + L+ +A G + A LF ++ + + +++ ++ G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 397 YAEVLKLFNHM-KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE-YTIVPGEVH 454
+ LF + KLG + D+ ++IL CS + G QI I++ Y P V
Sbjct: 424 NSLAFYLFRELIKLG-LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP--VT 480
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSM 478
++D+ + G++ L M
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGM 504
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 207/395 (52%), Gaps = 36/395 (9%)
Query: 197 EAINVFHEMIKMSVSP-NVALF-LNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 254
+A+N+F +M P + +F L L S + R + L S+H + ++ +++ +
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV-LGGSVHAHSVKSNFLSNPFVGCA 88
Query: 255 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF----------- 303
++ Y KC + +AR +F+ + R+ V W +MI+ Y H G + EA+ L+
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 304 ----------------------RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 341
R + + + +TL++L+ A S +G +KE+H
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
+R + + L+ Y +CG + + +F M +R + +W++++ AYA+HG+ L
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
K F M+L + PD++ F ++L ACSH+GL +E L F+ M +Y + + HY+C++D+
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDV 328
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSY 521
LSR G+ EAY ++++MP ++ LL ACR YG+ E+ E A+++L +EP N ++Y
Sbjct: 329 LSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANY 388
Query: 522 VLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYS 556
VL+ I GR +E +R K+ +K +PG S
Sbjct: 389 VLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 42/365 (11%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP-DLLTLANAILSCAELDYLCH 132
++ T + S +++Y + G +A LF QM LP D + A+ SCA
Sbjct: 7 SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66
Query: 133 GKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYL- 190
G S+H + ++ + AL+D+Y K V+ ARK+F+ + ++AV++N M++ Y
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 191 --------------------------------KNDLPVEAINVFHEMIKMSVSPNVALFL 218
D AI + +MI+ PN+ L
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
L+SA S + RL + IH Y R+ ++ + ++ Y +CG + Y +LVF+ M R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 279 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 338
D+V+W+S+I+ Y HG + A+ F+ ++ + D + +++L+A S G L+ V+
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG-LADEALVY 305
Query: 339 CLTYRAFHGKELSVN--NSLITTYAKCGKLNMARYLFQQMTER-CLTSWNAMLGAYAMHG 395
+ +G S + + L+ ++ G+ A + Q M E+ +W A+LGA
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR--- 362
Query: 396 NYAEV 400
NY E+
Sbjct: 363 NYGEI 367
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 56/328 (17%)
Query: 29 GRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAA 88
G ++H ++++ F + + LLDMY KC V A +F ++ + V WN +I+
Sbjct: 67 GGSVHAHSVKSNF-LSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVV--WNAMISH 123
Query: 89 YLHNGQALEAFELF---------------------------------RQMIHRKVLPDLL 115
Y H G+ EA EL+ R+MI + P+L+
Sbjct: 124 YTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERL 174
TL + +C+ + K IH Y R +EP + LV+ Y + + + +F+ +
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVS-----DLRD 229
++D V ++ +++ Y + A+ F EM V+P+ FLN++ A S D
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEAL 303
Query: 230 IRLARSIHGYVLR---HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV-SWTS 285
+ R Y LR Y V++ +++ G + A V M + +W +
Sbjct: 304 VYFKRMQGDYGLRASKDHYSCLVDVLSRV-------GRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 286 MITGYVHHGHIDEAIILFR---LLQREN 310
++ ++G I+ A I R +++ EN
Sbjct: 357 LLGACRNYGEIELAEIAARELLMVEPEN 384
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + R PN +TL++L+ A + +G+ + + IH YA R ++ ++ L++ Y +CG
Sbjct: 173 MIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQL-KSGLVEAYGRCG 231
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ VF M V +W+ LI+AY +G A A + F++M KV PD + N
Sbjct: 232 SIVYVQLVFDSME--DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNV 289
Query: 121 ILSCAEL----DYLCHGKSIHG-YMIRMGVEPDMVACTALVDLYSK 161
+ +C+ + L + K + G Y +R D +C LVD+ S+
Sbjct: 290 LKACSHAGLADEALVYFKRMQGDYGLR--ASKDHYSC--LVDVLSR 331
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 213/384 (55%), Gaps = 3/384 (0%)
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N ++ G+ + P+ +I ++ M+ SVS P++ F + + ++ I IHG V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
+R ++ +A ++ Y+ G ++ A VF+ M RDLVSW MI + H G ++A+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
+++ + E + DS TL++LL + + + L+ +H + + V+N+LI Y
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AKCG L A +F M +R + +WN+M+ Y +HG+ E + F M ++P+ +TF
Sbjct: 254 AKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFL 313
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
+L CSH GLV+EG++ F M ++ + P HY C++DL RAGQL + ++ + S
Sbjct: 314 GLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA-SS 372
Query: 481 THSSAALC-TLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAH 539
H L TLL +C+++ + E+GE K++++LE N+ YVL+++I + A
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 540 IRAMTKDKELKSTPGYSLIELDKQ 563
+R + + +L++ PG+S IE+ Q
Sbjct: 433 MRKLIRSHDLQTVPGWSWIEIGDQ 456
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 202/440 (45%), Gaps = 22/440 (5%)
Query: 25 SLQEGRAIHGYAIRRGFGVCDEIFETTL-LDMYHKCGGVKMAAAVFGKMNATSTTVGSWN 83
S+++ R IH + I G IF L G + A +F ++ +T WN
Sbjct: 17 SMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPST-SDWN 75
Query: 84 PLIAAYLHNGQALEAFELFRQMIHRKV-LPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
LI + ++ L + + +M+ V PDL T A+ SC + + IHG +IR
Sbjct: 76 YLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIR 135
Query: 143 MGVEPDMVACTALVDLYS-KFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
G D + T+LV YS V A K+F+ + +D V +NVM+ + L +A+++
Sbjct: 136 SGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSM 195
Query: 202 FHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAK 261
+ M V + + L+S+ + + + + +H + + V ++N +I YAK
Sbjct: 196 YKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAK 255
Query: 262 CGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISL 321
CG L+ A VFN MR RD+++W SMI GY HGH EAI FR + +R +++T + L
Sbjct: 256 CGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGL 315
Query: 322 LQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKL-NMARYLFQQM 376
L S G + E + FH L+ N ++ Y + G+L N ++
Sbjct: 316 LLGCSHQGLVKEGVEHFEIMSSQFH---LTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 377 TERCLTSWNAMLGAYAMHGN--YAEV-LKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
W +LG+ +H N EV +K ++ N D + TSI +A + +
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFN-AGDYVLMTSIYSAANDA---- 427
Query: 434 EGLQIFRSMIREYTI--VPG 451
+ R +IR + + VPG
Sbjct: 428 QAFASMRKLIRSHDLQTVPG 447
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 158/336 (47%), Gaps = 10/336 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T L + ++ S+ + IHG IR GF + D I T+L+ Y G V++A+
Sbjct: 105 PDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGF-LDDAIVATSLVRCYSANGSVEIASK 163
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M SWN +I + H G +A ++++M + V D TL + SCA +
Sbjct: 164 VFDEMPVRDLV--SWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHV 221
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMM 186
L G +H + E + AL+D+Y+K + A +F +R +D + +N M+
Sbjct: 222 SALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMI 281
Query: 187 TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY- 245
GY + VEAI+ F +M+ V PN FL L+ S ++ H ++ Q+
Sbjct: 282 IGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFH 340
Query: 246 -ITRVEIANQIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHID-EAIIL 302
V+ ++ Y + G L+ + +++ D V W +++ H +++ + +
Sbjct: 341 LTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAM 400
Query: 303 FRLLQRENLRI-DSVTLISLLQALSQLGCLSAVKEV 337
+L+Q E D V + S+ A + ++++++
Sbjct: 401 KKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKL 436
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 252/520 (48%), Gaps = 35/520 (6%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
+ + +L + + L + +H A ++G C+ +L+ Y KCG MA +F
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLD-CEISVVNSLISAYGKCGNTHMAERMF-- 273
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
+A S + SWN +I A + L+A +LF M P+ T + + + + L
Sbjct: 274 QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLS 333
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 190
G+ IHG +I+ G E +V AL+D Y+K ++ +R F+ +R+K+ V +N +++GY
Sbjct: 334 CGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISA--VSDLRD-----IRLARSIHGYVL-- 241
D P+ +++F +M++M P F + + V++L+ +R+ + YVL
Sbjct: 394 NKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSS 452
Query: 242 ------RHQYI-------------TRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
++Q + T V N + Y++ G + + + + D VS
Sbjct: 453 LMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVS 512
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL-T 341
W I + +E I LF+ + + N+R D T +S+L S+L L+ +H L T
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLIT 572
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
F + V N LI Y KCG + +F++ E+ L +W A++ +HG E L
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL 632
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
+ F KPD ++F SILTAC H G+V+EG+ +F+ M ++Y + P HY C +DL
Sbjct: 633 EKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDL 691
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTE 501
L+R G L EA +L++ MP + T L C + + +
Sbjct: 692 LARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQ 731
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 238/516 (46%), Gaps = 63/516 (12%)
Query: 13 LVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-----TTLLDMYHKCGGVKMAAA 67
+VSLL+ K S +A+H +I +C + + ++ +Y K G V +A
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSIT----LCSVLLQPVYVCNNIISLYEKLGEVSLAGK 70
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M + S+N +I Y G +A+ +F +M + LP+ T++ +LSCA L
Sbjct: 71 VFDQMPERNKV--SFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS-GLLSCASL 127
Query: 128 DYLCHGKSIHGYMIRMGV-EPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVM 185
D G +HG ++ G+ D T L+ LY + D+ + A ++FE + K +N M
Sbjct: 128 DVR-AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHM 186
Query: 186 MT-----GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
M+ G+LK E + F E+++M S + FL ++ VS ++D+ +++ +H
Sbjct: 187 MSLLGHRGFLK-----ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
+ + + N +I Y KCG A +F S D+VSW ++I + +A+
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTY 360
LF + + T +S+L S + LS +++H + + + + N+LI Y
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFY 361
Query: 361 AKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
AKCG L +R F + ++ + WNA+L YA + + L LF M +P E TF+
Sbjct: 362 AKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFS 420
Query: 421 SILTACS-------HSGLVEEGLQ----IFRSMIREY--------------------TIV 449
+ L +C HS +V G + + S++R Y ++V
Sbjct: 421 TALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSM--PSTHS 483
P N + + SR GQ E+ L+ ++ P T S
Sbjct: 481 P----LNIVAGIYSRRGQYHESVKLISTLEQPDTVS 512
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 46/365 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE--IFETTLLDMYHK 58
M + PN+ T VS+L ++ + L GR IHG I+ G C+ + L+D Y K
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG---CETGIVLGNALIDFYAK 363
Query: 59 CGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
CG ++ + F + + WN L++ Y + + LF QM+ P T +
Sbjct: 364 CGNLEDSRLCFDYIR--DKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFS 420
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVT------------- 165
A+ SC + + +H ++RMG E + ++L+ Y+K +
Sbjct: 421 TALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP 476
Query: 166 --------------------KARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM 205
++ K+ L D V +N+ + ++D E I +F M
Sbjct: 477 TSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Query: 206 IKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY-ITRVEIANQIIHTYAKCGY 264
++ ++ P+ F++++S S L D+ L SIHG + + + + N +I Y KCG
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGS 596
Query: 265 LQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA 324
++ VF R ++L++WT++I+ HG+ EA+ F+ + D V+ IS+L A
Sbjct: 597 IRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
Query: 325 LSQLG 329
G
Sbjct: 657 CRHGG 661
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + P++ T VS+L +KL L G +IHG + F D L+DMY KCG
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
++ VF + + +W LI+ +G EA E F++ + PD ++ +
Sbjct: 596 SIRSVMKVFEETREKNLI--TWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISI 653
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
+ +C + G + M GVEP+M VDL ++
Sbjct: 654 LTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLAR 694
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 207/414 (50%), Gaps = 34/414 (8%)
Query: 183 NVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLR 242
N + YL + P +A+ + ++++ P+ F++LIS + + + HG ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 243 HQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI------ 296
H + + N ++H Y CG L A+ +F + RD+VSW S+I G V +G +
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 297 -DE------------------------AIILFRLLQRENLRIDSVTLISLLQALSQLGCL 331
DE +I LFR + R + + TL+ LL A + L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 332 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAY 391
+ VH R F + ++ +LI Y KC ++ +AR +F ++ R +WN M+ A+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 392 AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPG 451
+HG L+LF M G ++PDE+TF +L C+ +GLV +G + M+ E+ I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 452 EVHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALCTLLSACRLYGDTEIGEAIAK 508
H C+ +L S AG EA +K++P T S LLS+ R G+ +GE+IAK
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 509 QILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDK 562
+++ +P N Y L+ NI + GRW++V +R M K++++ PG L++L +
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 32/298 (10%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI-----LSCAELDYLCHGKSI- 136
NP+ AYL + +A + ++ +PD T + I C + +CHG++I
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 137 HGYMIRMGVEPD---MVACTALVDLYSKF-----------------------DVTKARKM 170
HG + V+ M C +DL K DV A K+
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 171 FERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 230
F+ + +K+ + +N+M++ YL + P +I++F EM++ N + + L++A +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGY 290
+ RS+H ++R + V I +I Y KC + AR +F+ + R+ V+W MI +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 291 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
HG + + LF + LR D VT + +L ++ G +S + + L F K
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 42/319 (13%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIF--ETTLLDMYHKCGGVKMA 65
P+ T VSL+ K + G+ HG AI+ G CD++ + +L+ MY CG + +A
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG---CDQVLPVQNSLMHMYTCCGALDLA 172
Query: 66 AAVFGKM------NATSTTVG-----------------------SWNPLIAAYLHNGQAL 96
+F ++ + S G SWN +I+AYL
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
+ LFR+M+ + TL + +C L G+S+H +IR + +V TAL+
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALI 292
Query: 157 DLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 215
D+Y K +V AR++F+ L ++ V +NVM+ + + P + +F MI + P+
Sbjct: 293 DMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFN 273
F+ ++ + + +S + ++ ++ + +Q + + Y+ G+ + A
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMV-DEFQIKPNFGHQWCMANLYSSAGFPEEAEEALK 411
Query: 274 RMRSRDLVS----WTSMIT 288
+ D+ W ++++
Sbjct: 412 NLPDEDVTPESTKWANLLS 430
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 193/352 (54%), Gaps = 14/352 (3%)
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
LN+ S+ DLR + G + N +++ YAK G + AR +F+ M
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGS-------KDLPAWNSVVNAYAKAGLIDDARKLFDEMP 155
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQ--REN---LRIDSVTLISLLQALSQLGCL 331
R+++SW+ +I GYV G EA+ LFR +Q + N +R + T+ ++L A +LG L
Sbjct: 156 ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGAL 215
Query: 332 SAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCLTSWNAMLGA 390
K VH + ++ + +LI YAKCG L A+ +F + +++ + +++AM+
Sbjct: 216 EQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICC 275
Query: 391 YAMHGNYAEVLKLFNHMKLG-NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
AM+G E +LF+ M NI P+ +TF IL AC H GL+ EG F+ MI E+ I
Sbjct: 276 LAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGIT 335
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQ 509
P HY C++DL R+G + EA + + SMP +LLS R+ GD + E K+
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKR 395
Query: 510 ILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
+++L+P NS +YVL+SN+ A+ GRW EV IR + K + PG S +E++
Sbjct: 396 LIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVE 447
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
D SLL S G L + + V + K+L NS++ YAK G ++ AR LF
Sbjct: 96 DPFVRTSLLNMYSSCGDLRSAQRV----FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-----IKPDELTFTSILTACSH 428
+M ER + SW+ ++ Y M G Y E L LF M+L ++P+E T +++L+AC
Sbjct: 152 DEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC 488
G +E+G + + I +Y + V +ID+ ++ G L A + ++ S A
Sbjct: 212 LGALEQGKWV-HAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 489 TLLSACRLYGDTE 501
++ +YG T+
Sbjct: 271 AMICCLAMYGLTD 283
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 158/360 (43%), Gaps = 46/360 (12%)
Query: 82 WNPLIAAYLHN---GQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 138
WN +I A +HN Q ++ +M + +V PD T + S +L G+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 139 YMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLK------ 191
++ G++ D T+L+++YS D+ A+++F+ +KD +N ++ Y K
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 192 -----NDLP--------------------VEAINVFHEMI-----KMSVSPNVALFLNLI 221
+++P EA+++F EM + V PN ++
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 222 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS-RDL 280
SA L + + +H Y+ ++ + + +I YAKCG L+ A+ VFN + S +D+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 281 VSWTSMITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC 339
++++MI +G DE LF + +N+ +SVT + +L A G ++ K
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 340 LTYRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
+ F G S+ + ++ Y + G + A M E + W ++L M G+
Sbjct: 327 MMIEEF-GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 144/328 (43%), Gaps = 40/328 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M++ R+ P+ T LL + L G+ H + G D T+LL+MY CG
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDK-DPFVRTSLLNMYSSCG 111
Query: 61 GVKMAAAVFGK------------MNATST-----------------TVGSWNPLIAAYLH 91
++ A VF +NA + V SW+ LI Y+
Sbjct: 112 DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM 171
Query: 92 NGQALEAFELFRQMIHRK-----VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE 146
G+ EA +LFR+M K V P+ T++ + +C L L GK +H Y+ + VE
Sbjct: 172 CGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVE 231
Query: 147 PDMVACTALVDLYSKF-DVTKARKMFERL-RNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
D+V TAL+D+Y+K + +A+++F L KD Y+ M+ L E +F E
Sbjct: 232 IDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSE 291
Query: 205 MIKM-SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQIIHTYAKC 262
M +++PN F+ ++ A I +S ++ IT ++ ++ Y +
Sbjct: 292 MTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRS 351
Query: 263 GYLQYARLVFNRMR-SRDLVSWTSMITG 289
G ++ A M D++ W S+++G
Sbjct: 352 GLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 259/566 (45%), Gaps = 51/566 (9%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
D++ P+ +SL+HA SL R +H +RRG V L+
Sbjct: 22 DRQASPDESHFISLIHACKDTASL---RHVHAQILRRG--VLSSRVAAQLVSCSSLLKSP 76
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
+ ++F N+ N LI N + + F M+ V PD LT +
Sbjct: 77 DYSLSIF--RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLK 134
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFE----RLRNK 177
S ++L + G+++H ++ V+ D +LVD+Y+K K A ++FE R++ +
Sbjct: 135 SNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKE 194
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
+I+NV++ GY + A +F M + + L I
Sbjct: 195 SILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTL-------------------IK 235
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHID 297
GYV G L A+ +F M +++VSWT++I G+ G +
Sbjct: 236 GYV--------------------DSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE 275
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
AI + + + L+ + T+ ++L A S+ G L + +H + ++ +L+
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALV 335
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
YAKCG+L+ A +F M + + SW AM+ +A+HG + + ++ F M KPDE+
Sbjct: 336 DMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEV 395
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
F ++LTAC +S V+ GL F SM +Y I P HY ++DLL RAG+L EA+ LV++
Sbjct: 396 VFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN 455
Query: 478 MPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEV 537
MP L AC+ + E++++ +L+L+P SY+ + A G +V
Sbjct: 456 MPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 538 AHIRAMTKDKELKSTPGYSLIELDKQ 563
R + + + + G+S IELD Q
Sbjct: 516 EKRRLSLQKRIKERSLGWSYIELDGQ 541
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M ++ L PN T+ ++L A +K G+L G IHGY + G + D T L+DMY KCG
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL-DRAIGTALVDMYAKCG 342
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD---LLTL 117
+ AA VF MN + SW +I + +G+ +A + FRQM++ PD L +
Sbjct: 343 ELDCAATVFSNMN--HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAV 400
Query: 118 ANAILSCAELDYLCHGKSIHGYM-IRMGVEPDMVACTALVDLYSK 161
A L+ +E+D G + M + +EP + +VDL +
Sbjct: 401 LTACLNSSEVDL---GLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 158/588 (26%), Positives = 274/588 (46%), Gaps = 42/588 (7%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
LY +R+ SLL + L + +H + GF V + L +Y K G V A
Sbjct: 5 LYFSRLVNRSLLSKSPTLA-----KIVHAQLLEAGF-VRTTYWGNRCLQLYFKSGSVINA 58
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F + +T +WN + NG A +LF +M R V+ T+ + ++SC
Sbjct: 59 LQLFDDIPDKNTI--TWNVCLKGLFKNGYLNNALDLFDEMPERDVVS-WNTMISGLVSCG 115
Query: 126 ELDY---------------------------LC--HGKSIHGYMIRMGVEP-DMVACTAL 155
+Y C HG+ IHG I GV ++V ++
Sbjct: 116 FHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 156 VDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
+D+Y + V A +F + ++D V +N ++ + A++ F M +M + P+
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE 235
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNR 274
++S SDLR++ + ++ +++ + I ++KC L + +F
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 275 MRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
+ D V SMI Y H ++A+ LF L +++R D T S+L +++ + L
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHG 354
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
+VH L + + +V SL+ Y K G +++A +F + + L WN ++ A +
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARN 414
Query: 395 GNYAEVLKLFNHMKLG-NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 453
E L +FN + + ++KPD +T IL AC ++G V EG+QIF SM + + + PG
Sbjct: 415 SRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNE 474
Query: 454 HYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKL 513
HY CII+LL R G + EA ++ +P SS +L A GDT + E +AK +L+
Sbjct: 475 HYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 514 EPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELD 561
EP++S Y+++ I RW+ +R + +LKS G S I ++
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 163/334 (48%), Gaps = 14/334 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + P T L A+ + ++ G IHG AI G + + +++DMY + G
Sbjct: 127 MQRWEIRPTEFTFSIL---ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLG 183
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQ---ALEAFELFRQMIHRKVLPDLLTL 117
A +VF M V SWN LI + +G AL+ F L R+M ++ PD T+
Sbjct: 184 VFDYALSVFLTME--DRDVVSWNCLILSCSDSGNKEVALDQFWLMREM---EIQPDEYTV 238
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRN 176
+ + C++L L GK I+MG + + A +D++SK + + + K+F L
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
D+V+ N M+ Y + +A+ +F + SV P+ F +++S+++ + + +
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADV 357
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H V++ + +A ++ Y K G + A VF + +DL+ W ++I G +
Sbjct: 358 HSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRA 417
Query: 297 DEAIILF-RLLQRENLRIDSVTLISLLQALSQLG 329
E++ +F +LL ++L+ D VTL+ +L A G
Sbjct: 418 VESLAIFNQLLMNQSLKPDRVTLMGILVACCYAG 451
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 205/403 (50%), Gaps = 12/403 (2%)
Query: 161 KFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
+F V RK E+L D + + +TG LK EA+ + + V P + L
Sbjct: 67 RFQVENQRKT-EKL---DKTLKGLCVTGRLK-----EAVGLLWSS-GLQVEPET--YAVL 114
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
+ ++ + IH + + + +++ YA G LQ A ++F ++ RDL
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDL 174
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
+ W +MI+GYV G E + ++ +++ + D T S+ +A S L L K H +
Sbjct: 175 IPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAV 234
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEV 400
+ + V+++L+ Y KC + +F Q++ R + +W +++ Y HG +EV
Sbjct: 235 MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEV 294
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
LK F MK +P+ +TF +LTAC+H GLV++G + F SM R+Y I P HY ++D
Sbjct: 295 LKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVD 354
Query: 461 LLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
L RAG+L EAY V P +LL ACR++G+ ++ E A + L+L+P N +
Sbjct: 355 TLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGN 414
Query: 521 YVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIELDKQ 563
YV+ +N A G + + +R ++ +K PGYS IEL +
Sbjct: 415 YVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGE 457
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 129/289 (44%), Gaps = 8/289 (2%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGK 71
T LL + +G+ IH GF + +E + LL +Y G ++ A +F
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL-NEYLKVKLLILYALSGDLQTAGILFRS 168
Query: 72 MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLC 131
+ WN +I+ Y+ G E ++ M +++PD T A+ +C+ LD L
Sbjct: 169 LKIRDLI--PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 132 HGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYL 190
HGK H MI+ ++ +++ +ALVD+Y K + ++F++L ++ + + +++GY
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+ E + F +M + PN FL +++A + + H Y ++ Y E
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPE 345
Query: 251 IAN--QIIHTYAKCGYLQYA-RLVFNRMRSRDLVSWTSMITGYVHHGHI 296
+ ++ T + G LQ A V W S++ HG++
Sbjct: 346 GQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNV 394
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/591 (26%), Positives = 282/591 (47%), Gaps = 46/591 (7%)
Query: 3 DQRLYP-NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
+QR P N T +LL A + SL G+ +H + IR +E T L+ MY CG
Sbjct: 103 EQRGIPVNATTFSALLEACVRRKSLLHGKQVHVH-IRINGLESNEFLRTKLVHMYTACGS 161
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQA--LEAFELFRQMIHRKVLPDLLTLAN 119
VK A VF + +TS+ V SWN L+ + +G+ + F +M V ++ +L+N
Sbjct: 162 VKDAQKVFDE--STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKD 178
S A L G H I+ G+ + T+LVD+Y K V AR++F+ + +D
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
V++ M+ G N EA+ +F MI + + PN + ++ + D++ ++L + +H
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 238 GYVLRHQ-YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
+VL+ + Y+ + + + +I Y KCG + R VF + R+ +SWT++++GY +G
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
D+A+ +Q+E R D VT+ ++L ++L + KE+HC + +S+ SL
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 357 ITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDE 416
+ Y+KCG LF ++ +R + +W AM+ Y + + +++F M L +PD
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDS 519
Query: 417 LTFTSILTACSHSGLVEEGLQIFRSMI-REYTIVP-------------GEVHY-NCIIDL 461
+T +LT CS ++ G ++ ++ +E+ +P G++ N D
Sbjct: 520 VTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDA 579
Query: 462 LSRAGQLT-----EAY----------NLVKSMPS---THSSAALCTLLSACRLYGDTEIG 503
++ G LT EAY N + M S T ++ +LS C G +
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 504 EAIAKQILK---LEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKS 551
+L+ L+P + Y L+ +L GR +E + M+ L++
Sbjct: 640 YRFFNLMLRMYNLQP-SEEHYSLVIELLNRCGRVEEAQRLAVMSSSSSLQT 689
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 183/374 (48%), Gaps = 4/374 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+ ++++YPN V L ++L + +L+ G+ +H + ++ V + L+D+Y KCG
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ VF + SW L++ Y NG+ +A M PD++T+A
Sbjct: 367 DMASGRRVF--YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDA 179
+ CAEL + GK IH Y ++ P++ T+L+ +YSK V + ++F+RL ++
Sbjct: 425 LPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNV 484
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
+ M+ Y++N I VF M+ P+ +++ SDL+ ++L + +HG+
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
+L+ ++ + ++ +II Y KCG L+ A F+ + + ++WT++I Y + +A
Sbjct: 545 ILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDA 604
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL-IT 358
I F + ++ T ++L SQ G + L R ++ + + SL I
Sbjct: 605 INCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE 664
Query: 359 TYAKCGKLNMARYL 372
+CG++ A+ L
Sbjct: 665 LLNRCGRVEEAQRL 678
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 6/285 (2%)
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+N+L V A+ + + + + N F L+ A + + + +H ++ + +
Sbjct: 89 QNNLEV-ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+ +++H Y CG ++ A+ VF+ S ++ SW +++ G V G +L +
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKE---VHCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
L +D + + SL SA+++ H L + + + SL+ Y KCGK+
Sbjct: 208 LGVD-LNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVG 266
Query: 368 MARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTAC 426
+AR +F ++ ER + W AM+ A + E L LF M I P+ + T+IL
Sbjct: 267 LARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVL 326
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
++ G ++ +++ V ++ +IDL + G +
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASG 371
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 222/443 (50%), Gaps = 42/443 (9%)
Query: 164 VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISA 223
+ A K+F+ + D + ++ ++K VEA F ++ + + PN F +I +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 224 VSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
+ RD++L + +H Y L+ + V + + +++ Y K L AR F+ R ++VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 284 TSMITGYVHHGHIDEAIILFRLLQ-------------------------------RENLR 312
T++I+GY+ +EA+ LFR + RE +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 313 I-DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLITTYAKCGKLNMA 369
I + T + A+S + A K +H + F GK +V NSLI+ Y+KCG + +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIK-FLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 370 RYLFQQMTE--RCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSILTAC 426
F ++ E R + SWN+M+ YA +G E + +F M K N++P+ +T +L AC
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 427 SHSGLVEEGLQIFRSMIREY---TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
+H+GL++EG F + +Y ++ E HY C++D+LSR+G+ EA L+KSMP
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELE-HYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 484 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAM 543
LL C+++ + + + A +IL+L+PR+ SSYV++SN + W V+ IR
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 544 TKDKELKSTPGYSLIELDKQREV 566
K+ LK G S IE+ Q V
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRV 483
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 175/357 (49%), Gaps = 49/357 (13%)
Query: 85 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG 144
+I ++ + +EA + F++++ + P+ T I S + GK +H Y ++MG
Sbjct: 64 VIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMG 123
Query: 145 VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKND---------- 193
+ ++ +A+++ Y K +T AR+ F+ R+ + V +++GYLK
Sbjct: 124 LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFR 183
Query: 194 -LPV--------------------EAINVFHEMIKMSVS-PNVALFLNLISAVSDLRDIR 231
+P EA+N F +M++ V PN + F I+A+S++
Sbjct: 184 AMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG 243
Query: 232 LARSIHGYVLRHQYITR---VEIANQIIHTYAKCGYLQYARLVFNRMRS--RDLVSWTSM 286
+SIH ++ ++ + V + N +I Y+KCG ++ + L FN++ R++VSW SM
Sbjct: 244 AGKSIHACAIK--FLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSM 301
Query: 287 ITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQA-----LSQLGCLSAVKEVHCL 340
I GY H+G +EA+ +F ++++ NLR ++VT++ +L A L Q G + K V+
Sbjct: 302 IWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVN-- 359
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
Y + EL ++ ++ G+ A L + M + + W A+LG +H N
Sbjct: 360 DYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSN 416
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIR---RGFGVCDEIFETTLLDMYHKCGGVKM 64
PN T + A + + S G++IH AI+ + F V +L+ Y KCG ++
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV---FVWNSLISFYSKCGNMED 280
Query: 65 AAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL-PDLLTLANAILS 123
+ F K+ + SWN +I Y HNG+ EA +F +M+ L P+ +T+ + +
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 124 CA-----ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
C + Y+ K+++ Y +E + AC +VD+ S+
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYAC--MVDMLSR 381
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 208/438 (47%), Gaps = 39/438 (8%)
Query: 160 SKFDVTKARKMFERLRNKDAVIYN-VMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 218
SK V+ A +F + N +N ++ L + + F EM + SV P+ F
Sbjct: 60 SKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFP 119
Query: 219 NLISAVSDLR--DIRLARSIHGYVLRHQYITRVEIANQIIHTYA---------------- 260
+ A + + D+ L +++H LR ++ + N +I Y+
Sbjct: 120 FVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENP 179
Query: 261 ---------------KCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
K + AR +F+ M RDLVSW S+I+GY H EAI LF
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ L+ D+V ++S L A +Q G K +H T R + + L+ YAKCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
++ A +F+ +++ L +WNAM+ AMHGN + F M IKPD +TF S+L
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSA 485
CSHSGLV+E +F M Y + HY C+ DLL RAG + EA +++ MP +
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 486 ----ALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIR 541
A LL CR++G+ EI E A ++ L P + Y ++ + A RW+EV +R
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Query: 542 A-MTKDKELKSTPGYSLI 558
+ +DK++K G+S +
Sbjct: 480 EIIDRDKKVKKNVGFSKV 497
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 168/388 (43%), Gaps = 43/388 (11%)
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLI-AAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
V A +VF + ST +N +I LH +L + F +M R V PD T
Sbjct: 64 VSYATSVFRFITNPSTFC--FNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFV 121
Query: 121 ILSCAELDY--LCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----------FD----- 163
+CA L K++H +R G+ D+ L+ +YS FD
Sbjct: 122 FKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR 181
Query: 164 -----------------VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMI 206
+ +AR++F+ + +D V +N +++GY + + EAI +F EM+
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 207 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 266
+ + P+ ++ +SA + D + ++IH Y R + +A ++ YAKCG++
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
A +F + L +W +MITG HG+ + + FR + ++ D VT IS+L S
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 327 QLGCLSAVKEVHCLTYRAFH-GKELSVNNSLITTYAKCGKLNMARYLFQQMTE-----RC 380
G + + + + +E+ + + G + A + +QM +
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
L +W+ +LG +HGN K N +K
Sbjct: 422 LLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
L P+ V +VS L A A+ G Q+G+AIH Y R+ + D T L+D Y KCG + A
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI-DSFLATGLVDFYAKCGFIDTA 303
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F + T+ +WN +I +G + FR+M+ + PD +T + ++ C+
Sbjct: 304 MEIFEL--CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 257/516 (49%), Gaps = 49/516 (9%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
SW L+ + + E +++ M + + P + + + +C +++ + GK IH
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 141 IRMGVEPDMVACTALVDLYSK----------FD----------------------VTKAR 168
++ G+ + T LV LYS+ FD + +AR
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 169 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEM-IKMSVSPNVALFLNLISAVSDL 227
++F+++ KDAV +N++++ Y K A ++F M +K S N+ LI +
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI-----LIGGYVNC 245
Query: 228 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMI 287
R+++LAR+ + + ++ + +I Y K G +Q A +F M +D + + +MI
Sbjct: 246 REMKLARTYFDAMPQKNGVSWI----TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 288 TGYVHHGHIDEAIILF-RLLQREN-LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
Y +G +A+ LF ++L+R + ++ D +TL S++ A SQLG S V +Y
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE--SYITE 359
Query: 346 HGKELS--VNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKL 403
HG ++ ++ SLI Y K G A +F + ++ S++AM+ ++G E L
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F M I P+ +TFT +L+A SHSGLV+EG + F SM +++ + P HY ++D+L
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLG 478
Query: 464 RAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVL 523
RAG+L EAY L+KSMP ++ LL A L+ + E GE +KLE +
Sbjct: 479 RAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH 538
Query: 524 ISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLIE 559
++ I + GRWD+ +R K+K+L T G S +E
Sbjct: 539 LAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
++ + P+ +TL S++ A ++LG+ G + Y G + D++ T+L+D+Y K G
Sbjct: 323 RNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKI-DDLLSTSLIDLYMKGGD 381
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
A +F +N T S++ +I NG A EA LF MI +K+ P+++T +
Sbjct: 382 FAKAFKMFSNLNKKDTV--SYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Query: 122 LSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN----K 177
+ + + G M +EP +VD+ + + + +E +++
Sbjct: 440 SAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGR--AGRLEEAYELIKSMPMQP 497
Query: 178 DAVIYN-VMMTGYLKNDLPVEAINVFHEMIKMSVSP-----NVALFLNLISAVSDLRDIR 231
+A ++ +++ L N++ I H +K+ P ++A+ + + D R +R
Sbjct: 498 NAGVWGALLLASGLHNNVEFGEIACSH-CVKLETDPTGYLSHLAMIYSSVGRWDDARTVR 556
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 230/443 (51%), Gaps = 15/443 (3%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTK----ARKMFERLRNKDAVIYNVMMTG 188
KS H I G+ + A + L+ + ++ K A +F+ + ++ +Y+ M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 189 YLKNDLPVEAINVFHEMIKM---SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ- 244
++ P + F M+K ++P+ F LI A + + IH +V+++
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+++ + ++ Y + L AR VF+ + D+V W ++ GYV G E + +FR
Sbjct: 148 FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFR 207
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKELSVNNSLITTYAKC 363
+ + L D ++ + L A +Q+G L+ K +H + +++ ++ V +L+ YAKC
Sbjct: 208 EMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKC 267
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IKPDELTFTSI 422
G + A +F+++T R + SW A++G YA +G + + ++ + IKPD + +
Sbjct: 268 GCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGV 327
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
L AC+H G +EEG + +M Y I P HY+CI+DL+ RAG+L +A NL++ MP
Sbjct: 328 LAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKP 387
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN----SSSYVLISNILAEGGRWDEVA 538
++ LL+ CR + + E+GE K +L LE N ++ V +SNI R E +
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAS 447
Query: 539 HIRAMTKDKELKSTPGYSLIELD 561
+R M + + ++ TPG+S++E+D
Sbjct: 448 KVRGMIEQRGVRKTPGWSVLEVD 470
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 153/308 (49%), Gaps = 6/308 (1%)
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACT 153
L F L + + P LT I++C + + GK IH ++++ GV D T
Sbjct: 97 GLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQT 156
Query: 154 ALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
++ +Y + + ARK+F+ + D V ++V+M GY++ L E + VF EM+ + P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYARLV 271
+ ++A + + + + IH +V + +I + V + ++ YAKCG ++ A V
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 272 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQLGC 330
F ++ R++ SW ++I GY +G+ +A+ L+RE+ ++ DSV L+ +L A + G
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 331 LSAVKE-VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS-WNAML 388
L + + + R + + ++ + G+L+ A L ++M + L S W A+L
Sbjct: 337 LEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Query: 389 GAYAMHGN 396
H N
Sbjct: 397 NGCRTHKN 404
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 146/301 (48%), Gaps = 7/301 (2%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
+++ + P+ +T L+ A K G+ IH + ++ G + D +T +L +Y +
Sbjct: 108 EEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKL 167
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
+ A VF ++ V W+ L+ Y+ G E E+FR+M+ + + PD ++ A+
Sbjct: 168 LLDARKVFDEI--PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTAL 225
Query: 122 LSCAELDYLCHGKSIHGYMIRMG-VEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+CA++ L GK IH ++ + +E D+ TALVD+Y+K + A ++F++L ++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 285
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARS-IH 237
+ ++ GY +A+ + + + P+ + L +++A + + RS +
Sbjct: 286 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHI 296
R++ + E + I+ + G L A + +M + L S W +++ G H ++
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 297 D 297
+
Sbjct: 406 E 406
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 179/306 (58%), Gaps = 6/306 (1%)
Query: 255 IIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 314
++ Y+K G L A +F+ M RD+ SW ++I G V EA+ L++ ++ E +R
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 315 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQ 374
VT+++ L A S LG VKE + + + + V+N+ I Y+KCG ++ A +F+
Sbjct: 210 EVTVVAALGACSHLG---DVKEGENI-FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 375 QMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
Q T ++ + +WN M+ +A+HG L++F+ ++ IKPD++++ + LTAC H+GLVE
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
GL +F +M + + HY C++DLLSRAG+L EA++++ SM +LL A
Sbjct: 326 YGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Query: 494 CRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTP 553
+Y D E+ E +++I ++ N +VL+SN+ A GRW +V +R + K++K P
Sbjct: 385 SEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIP 444
Query: 554 GYSLIE 559
G S IE
Sbjct: 445 GLSYIE 450
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 11/195 (5%)
Query: 32 IHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLH 91
+H RRG D + TTLLD Y K G + A +F +M V SWN LIA +
Sbjct: 131 LHCQINRRGLSA-DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD--VASWNALIAGLVS 187
Query: 92 NGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSI-HGYMIRMGVEPDMV 150
+A EA EL+++M + +T+ A+ +C+ L + G++I HGY +++
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVI 242
Query: 151 ACTALVDLYSKFD-VTKARKMFERLRNKDAVI-YNVMMTGYLKNDLPVEAINVFHEMIKM 208
A +D+YSK V KA ++FE+ K +V+ +N M+TG+ + A+ +F ++
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 209 SVSPNVALFLNLISA 223
+ P+ +L ++A
Sbjct: 303 GIKPDDVSYLAALTA 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAI-HGYAIRRGFGVCDEIFETTLLDMYHKC 59
M+ + + + VT+V+ L A + LG ++EG I HGY+ + I +DMY KC
Sbjct: 201 METEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND------NVIVSNAAIDMYSKC 254
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
G V A VF + + V +WN +I + +G+A A E+F ++ + PD ++
Sbjct: 255 GFVDKAYQVFEQFTGKKSVV-TWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK 161
A+ +C + +G S+ M GVE +M +VDL S+
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSR 355
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 253/558 (45%), Gaps = 48/558 (8%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ LV LL + G + R +HGY + GF V + +L+ Y ++ A
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGF-VSNTRLSNSLMRFYKTSDSLEDAHK 111
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF +M V SWN L++ Y+ +G+ E LF ++ V P+ + A+ +CA L
Sbjct: 112 VFDEM--PDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 128 DYLCHGKSIHGYMIRMGVEP-DMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVM 185
G IH ++++G+E ++V L+D+Y K + A +F+ + KD V +N +
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ +N + FH+M +P+ +
Sbjct: 230 VASCSRNGKLELGLWFFHQM----PNPDTVTY---------------------------- 257
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
N++I + K G A V + M + + SW +++TGYV+ EA F
Sbjct: 258 -------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ +R D +L +L A++ L + +H ++ + V ++LI Y+KCG
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IKPDELTFTSILT 424
L A +F M + L WN M+ YA +G+ E +KLFN +K +KPD TF ++L
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 425 ACSHSGL-VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
CSH + +E L F MI EY I P H +I + + G++ +A +++ +
Sbjct: 431 VCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYD 490
Query: 484 SAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS--YVLISNILAEGGRWDEVAHIR 541
A LL AC D + + +A ++++L + Y+++SN+ A RW EV IR
Sbjct: 491 GVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIR 550
Query: 542 AMTKDKELKSTPGYSLIE 559
+ ++ + G S I+
Sbjct: 551 KIMRESGVLKEVGSSWID 568
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 10/279 (3%)
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
E+I P+ + ++L+ + + L R +HGYV +H +++ ++N ++ Y
Sbjct: 45 ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSD 104
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 323
L+ A VF+ M D++SW S+++GYV G E I LF L R ++ + + + L
Sbjct: 105 SLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 324 ALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT 382
A ++L +H L + V N LI Y KCG ++ A +FQ M E+
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 383 SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
SWNA++ + + +G L F+ M PD +T+ ++ A SG Q+ M
Sbjct: 225 SWNAIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Query: 443 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 481
P +N I+ + + EA M S+
Sbjct: 281 PN-----PNSSSWNTILTGYVNSEKSGEATEFFTKMHSS 314
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 193/452 (42%), Gaps = 52/452 (11%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
++PN + + L A A+L G IH ++ G + + L+DMY KCG + A
Sbjct: 152 VFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA 211
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
VF M T SWN ++A+ NG+ F QM P+
Sbjct: 212 VLVFQHMEEKDTV--SWNAIVASCSRNGKLELGLWFFHQM------PN------------ 251
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
PD V L+D + K D A ++ + N ++ +N
Sbjct: 252 ---------------------PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNT 290
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++TGY+ ++ EA F +M V + +++AV+ L + IH +
Sbjct: 291 ILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG 350
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+RV +A+ +I Y+KCG L++A L+F M ++L+ W MI+GY +G EAI LF
Sbjct: 351 LDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFN 410
Query: 305 LLQREN-LRIDSVTLISLLQALSQ----LGCLSAVKEVHCLTYRAFHGKELSVNNSLITT 359
L++E L+ D T ++LL S + + E+ YR E SLI
Sbjct: 411 QLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC--SLIRA 468
Query: 360 YAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDEL 417
+ G++ A+ + Q+ +W A+LGA + + + M +LG+ DE
Sbjct: 469 MGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEY 528
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
+ + ++ E QI R ++RE ++
Sbjct: 529 LYIVMSNLYAYHERWREVGQI-RKIMRESGVL 559
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 171/442 (38%), Gaps = 82/442 (18%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
++ + SW+ ++ A G ++ ++I+ PD L + + Y+
Sbjct: 16 GSTASSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLC 74
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDAVIYNVMMTGYLKN 192
+ +HGY+ + G + +L+ Y D + A K+F+ + + D + +N +++GY+++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEI 251
E I +F E+ + V PN F ++A + L L IH +++ V +
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 252 ANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
N +I Y KCG++ A LVF M +D VSW +++ +G ++ + F +
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP-- 252
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
D+VT N LI + K G N A
Sbjct: 253 --DTVTY-----------------------------------NELIDAFVKSGDFNNAFQ 275
Query: 372 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT----------- 420
+ M +SWN +L Y E + F M ++ DE + +
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 421 ----SILTACSHS--------------------GLVEEGLQIFRSMIREYTIVPGEVHYN 456
S++ AC+H G+++ +F +M R+ IV +N
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIV-----WN 390
Query: 457 CIIDLLSRAGQLTEAYNLVKSM 478
+I +R G EA L +
Sbjct: 391 EMISGYARNGDSIEAIKLFNQL 412
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 208/420 (49%), Gaps = 36/420 (8%)
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
R K +YN ++ YL ++ +F M+ V PN F +LI A +
Sbjct: 47 RWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN--------------------- 273
++HG L+ ++ + + Y + G L+ +R +F+
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 274 ----------RMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENLRI--DSVTLIS 320
RM D+VSWT++I G+ G +A+++F ++Q E I + T +S
Sbjct: 167 EMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 321 LLQALSQL--GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTE 378
+L + + G + K++H ++ +L+ Y K G L MA +F Q+ +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 379 RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
+ + +WNA++ A A +G + L++F MK + P+ +T +ILTAC+ S LV+ G+Q+
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYG 498
F S+ EY I+P HY C++DL+ RAG L +A N ++S+P ++ L LL AC+++
Sbjct: 347 FSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE 406
Query: 499 DTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKSTPGYSLI 558
+TE+G + KQ++ L+P++ YV +S A W E +R + ++ P YS++
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 37/283 (13%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI 141
+N LI +YL G+ + LF M+ V P+ LT + I + + +G ++HG +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 142 RMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK----------------------- 177
+ G D T+ V Y + D+ +RKMF+ + N
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 178 --------DAVIYNVMMTGYLKNDLPVEAINVFHEMI---KMSVSPNVALFLNLISAVS- 225
D V + ++ G+ K L +A+ VF EMI + ++PN A F++++S+ +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 226 -DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWT 284
D IRL + IHGYV+ + I + ++ Y K G L+ A +F+++R + + +W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 285 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
++I+ +G +A+ +F +++ + + +TL+++L A ++
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 36/261 (13%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN +T SL+ AA S+ G A+HG A++RGF + D +T+ + Y + G ++ +
Sbjct: 84 PNNLTFPSLIKAACSSFSVSYGVALHGQALKRGF-LWDPFVQTSFVRFYGEVGDLESSRK 142
Query: 68 VF---------------------GKMN--------ATSTTVGSWNPLIAAYLHNGQALEA 98
+F G+M+ T V SW +I + G +A
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 99 FELFRQMIHRK---VLPDLLTLANAILSCAELDY--LCHGKSIHGYMIRMGVEPDMVACT 153
+F +MI + + P+ T + + SCA D + GK IHGY++ + T
Sbjct: 203 LMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 154 ALVDLYSKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
AL+D+Y K D+ A +F+++R+K +N +++ N P +A+ +F M V P
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHP 322
Query: 213 NVALFLNLISAVSDLRDIRLA 233
N L +++A + + + L
Sbjct: 323 NGITLLAILTACARSKLVDLG 343
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 227/443 (51%), Gaps = 15/443 (3%)
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTK----ARKMFERLRNKDAVIYNVMMTG 188
KS H I G+ + A + L+ + ++ K A +F+ + ++ +Y+ M+
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 189 YLKNDLPVEAINVFHEMIKM---SVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ- 244
++ P + F M+K ++P+ F LI A + + IH +V+++
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFR 304
+++ + ++ Y + L AR VF+ + D+V W ++ GYV G E + +F+
Sbjct: 148 FLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFK 207
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH-CLTYRAFHGKELSVNNSLITTYAKC 363
+ + D ++ + L A +Q+G L+ K +H + + + ++ V +L+ YAKC
Sbjct: 208 EMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKC 267
Query: 364 GKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN-IKPDELTFTSI 422
G + A +F+++T R + SW A++G YA +G + + ++ + IKPD + +
Sbjct: 268 GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGV 327
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
L AC+H G +EEG + +M Y I P HY+CI+DL+ RAG+L +A +L++ MP
Sbjct: 328 LAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKP 387
Query: 483 SSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN----SSSYVLISNILAEGGRWDEVA 538
++ LL+ CR + + E+GE + +L LE N ++ V +SNI R E
Sbjct: 388 LASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAF 447
Query: 539 HIRAMTKDKELKSTPGYSLIELD 561
+R M + + ++ TPG+SL+E+D
Sbjct: 448 KVRGMIEQRGIRKTPGWSLLEVD 470
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 156/317 (49%), Gaps = 24/317 (7%)
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVE-PDMVACT 153
L F L + + P LT I++C + + GK IH ++++ GV D T
Sbjct: 97 GLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT 156
Query: 154 ALVDLYSK----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
++ +Y + FD ARK+F+ + D V ++V+M GY++ L E + VF EM+
Sbjct: 157 GVLRIYVEDKLLFD---ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG 213
Query: 210 VSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYA 268
+ P+ ++A + + + + IH +V + ++I + V + ++ YAKCG ++ A
Sbjct: 214 IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETA 273
Query: 269 RLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN-LRIDSVTLISLLQALSQ 327
VF ++ R++ SW ++I GY +G+ +A ++RE+ ++ DSV L+ +L A +
Sbjct: 274 VEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAH 333
Query: 328 LGCLSAVKEV-------HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC 380
G L + + + +T + H + ++ + G+L+ A L ++M +
Sbjct: 334 GGFLEEGRTMLENMEARYGITPKHEH------YSCIVDLMCRAGRLDDALDLIEKMPMKP 387
Query: 381 LTS-WNAMLGAYAMHGN 396
L S W A+L H N
Sbjct: 388 LASVWGALLNGCRTHKN 404
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 144/301 (47%), Gaps = 7/301 (2%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG 61
+++ + P+ +T L+ A K G+ IH + ++ G + D +T +L +Y +
Sbjct: 108 EEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKL 167
Query: 62 VKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAI 121
+ A VF ++ V W+ L+ Y+ G E E+F++M+ R + PD ++ A+
Sbjct: 168 LFDARKVFDEI--PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTAL 225
Query: 122 LSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSKFD-VTKARKMFERLRNKDA 179
+CA++ L GK IH ++ + +E D+ TALVD+Y+K + A ++FE+L ++
Sbjct: 226 TACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVSDLRDIRLARS-IH 237
+ ++ GY +A + + + P+ + L +++A + + R+ +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-WTSMITGYVHHGHI 296
R+ + E + I+ + G L A + +M + L S W +++ G H ++
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 297 D 297
+
Sbjct: 406 E 406
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 220/428 (51%), Gaps = 5/428 (1%)
Query: 7 YPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAA 66
+ N V LL+ ++ + GR +HG ++ G G + I E++L+ Y +CG + A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG--NLIVESSLVYFYAQCGELTSAL 238
Query: 67 AVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
F M V SW +I+A G ++A +F M++ LP+ T+ + + +C+E
Sbjct: 239 RAFDMME--EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNVM 185
L G+ +H +++ ++ D+ T+L+D+Y+K +++ RK+F+ + N++ V + +
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
+ + + EAI++F M + + N ++++ A + + L + +H ++++
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRL 305
V I + ++ Y KCG + A V ++ SRD+VSWT+MI+G GH EA+ +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ +E + + T S L+A + L + +H + + + V ++LI YAKCG
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 366 LNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
++ A +F M E+ L SW AM+ YA +G E LKL M+ + D+ F +IL+
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Query: 426 CSHSGLVE 433
C L E
Sbjct: 597 CGDIELDE 604
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 225/443 (50%), Gaps = 18/443 (4%)
Query: 48 FETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 107
F L+ + G + A VF M +T +W +I YL G EAF LF +
Sbjct: 119 FGNNLISSCVRLGDLVYARKVFDSMPEKNTV--TWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 108 RKVLPD----LLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF- 162
+ + L N AE + G+ +HG M+++GV +++ ++LV Y++
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFEL---GRQVHGNMVKVGV-GNLIVESSLVYFYAQCG 232
Query: 163 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
++T A + F+ + KD + + +++ + ++AI +F M+ PN +++
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILK 292
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS 282
A S+ + +R R +H V++ T V + ++ YAKCG + R VF+ M +R+ V+
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
WTS+I + G +EAI LFR+++R +L +++T++S+L+A +G L KE+H
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLK 402
+ K + + ++L+ Y KCG+ A + QQ+ R + SW AM+ + G+ +E L
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR---SMIREYTIVPGEVHYNCII 459
M ++P+ T++S L AC++S E L I R S+ ++ + + +I
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANS----ESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 460 DLLSRAGQLTEAYNLVKSMPSTH 482
+ ++ G ++EA+ + SMP +
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKN 551
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 4/336 (1%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + PN T+ S+L A ++ +L+ GR +H ++R D T+L+DMY KCG
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT-DVFVGTSLMDMYAKCG 333
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
+ VF M+ +T +W +IAA+ G EA LFR M R ++ + LT+ +
Sbjct: 334 EISDCRKVFDGMSNRNTV--TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSI 391
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDA 179
+ +C + L GK +H +I+ +E ++ + LV LY K ++ A + ++L ++D
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV 451
Query: 180 VIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
V + M++G EA++ EMI+ V PN + + + A ++ + + RSIH
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSI 511
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEA 299
++ ++ V + + +IH YAKCG++ A VF+ M ++LVSW +MI GY +G EA
Sbjct: 512 AKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREA 571
Query: 300 IILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK 335
+ L ++ E +D ++L + AV+
Sbjct: 572 LKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVE 607
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 184/359 (51%), Gaps = 12/359 (3%)
Query: 163 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS-PNVALFLNLI 221
D+ ARK+F+ + K+ V + M+ GYLK L EA +F + +K + N +F+ L+
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 222 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV 281
+ S + L R +HG +++ + + + + +++ YA+CG L A F+ M +D++
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 282 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 341
SWT++I+ GH +AI +F + + T+ S+L+A S+ L ++VH L
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
+ ++ V SL+ YAKCG+++ R +F M+ R +W +++ A+A G E +
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR---EYTIVPGEVHYNCI 458
LF MK ++ + LT SIL AC G + G ++ +I+ E + G +
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST----L 426
Query: 459 IDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILK--LEP 515
+ L + G+ +A+N+++ +PS + ++S C G K++++ +EP
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEP 484
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 142/317 (44%), Gaps = 35/317 (11%)
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITG 289
+RL + IH L+ + N +I + + G L YAR VF+ M ++ V+WT+MI G
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG 157
Query: 290 YVHHGHIDEAIILFRLLQRENLRI-DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
Y+ +G DEA LF + +R + + LL S+ ++VH + G
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN 217
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
L V +SL+ YA+CG+L A F M E+ + SW A++ A + G+ + + +F M
Sbjct: 218 -LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQ----IFRSMIREYTIVP----------GE-- 452
P+E T SIL ACS + G Q + + MI+ V GE
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 453 --------------VHYNCIIDLLSRAGQLTEAYNLVKSMPSTH---SSAALCTLLSACR 495
V + II +R G EA +L + M H ++ + ++L AC
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 496 LYGDTEIGEAIAKQILK 512
G +G+ + QI+K
Sbjct: 397 SVGALLLGKELHAQIIK 413
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
R+D L LQ+ + + +K +H + + F + + N+LI++ + G L AR
Sbjct: 82 RVDYALLAEWLQSSNGM---RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARK 138
Query: 372 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF-NHMKLGNIKPDELTFTSILTACSHSG 430
+F M E+ +W AM+ Y +G E LF +++K G +E F +L CS
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 431 LVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL 490
E G Q+ +M++ V + + ++ ++ G+LT A M + +
Sbjct: 199 EFELGRQVHGNMVK--VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEE-KDVISWTAV 255
Query: 491 LSACRLYG 498
+SAC G
Sbjct: 256 ISACSRKG 263
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 168/311 (54%), Gaps = 5/311 (1%)
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILF-RLLQRENL 311
N +I G + A +M +R +VSWT++I GY EAI+LF R++ + +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+ + +T++++L A+ LG L VH + R F ++ V NSLI YAKCG + A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 371 YLFQQMT--ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
F ++ + L SW M+ A+A+HG E + +F M+ +KP+ +T S+L ACSH
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
Query: 429 SGLVEEG-LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 487
GL EE L+ F +M+ EY I P HY C++D+L R G+L EA + +P +
Sbjct: 373 GGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVW 432
Query: 488 CTLLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 547
LL AC +Y D E+ E + +++++LE + YVL+SNI GR+ + R +
Sbjct: 433 RMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Query: 548 ELKSTPGYSLI 558
+ PG+S +
Sbjct: 493 GVAKLPGHSQV 503
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMI-------HRKVLPDLLTLANAIL----SCAELDYL 130
+NPL+ Y L A+ L+ Q+ H K LP + L S L
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 131 CHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRNKDAVIYNVMMTG- 188
G +HG +++G E + TALV +Y ++ A K+F+ + ++ V +NVM+TG
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGL 199
Query: 189 ------------------------------YLKNDLPVEAINVFHEMIKM-SVSPNVALF 217
Y + D P EAI +F M+ ++ PN
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITI 259
Query: 218 LNLISAVSDLRDIRLARSIHGYVLRHQYIT-RVEIANQIIHTYAKCGYLQYARLVFNRMR 276
L ++ AV +L D+++ S+H YV + ++ + + N +I YAKCG +Q A F +
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 277 S--RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
+ ++LVSWT+MI+ + HG EA+ +F+ ++R L+ + VT+IS+L A S G
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN +T++++L A LG L+ ++H Y +RGF CD +L+D Y KCG ++ A
Sbjct: 254 PNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFK 313
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC--- 124
F ++ + SW +I+A+ +G EA +F+ M + P+ +T+ + + +C
Sbjct: 314 FFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHG 373
Query: 125 --AELDYLCHGKSIHGYMIRMGVEPDMVACTALVDL 158
AE ++L + + + + PD+ LVD+
Sbjct: 374 GLAEEEFL---EFFNTMVNEYKITPDVKHYGCLVDM 406
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 196/392 (50%), Gaps = 37/392 (9%)
Query: 123 SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRNKDAVI 181
+C+ L K IH +I+ + D + L+ + S F T+ A +F +L++
Sbjct: 29 TCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT 85
Query: 182 YNVMMTGYLKNDLPVEAINVF-HEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N+M+ N P EA+ +F MI + F +I A IRL +HG
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS--------------- 285
++ + V N ++ Y KCG R VF++M R +VSWT+
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 286 ----------------MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
MIT YV + DEA LFR +Q ++++ + T+++LLQA +QLG
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
LS + VH ++ + + +LI Y+KCG L AR +F M + L +WN+M+
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 390 AYAMHGNYAEVLKLF-NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 448
+ +HG E L LF + +++PD +TF +L+AC+++G V++GL+ F MI+ Y I
Sbjct: 326 SLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
P H C+I LL +A ++ +A NLV+SM S
Sbjct: 386 SPIREHNACMIQLLEQALEVEKASNLVESMDS 417
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 37/334 (11%)
Query: 30 RAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAY 89
+ IH I+ D++ L+ + G + A+ VF ++ + ST +WN +I +
Sbjct: 37 KQIHTKIIKHNL-TNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF--TWNLMIRSL 93
Query: 90 LHNGQALEAFELF-RQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPD 148
N + EA LF MI + D T I +C + G +HG I+ G D
Sbjct: 94 SVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 149 MVACTALVDLYSK----------FDVTKARKM----------------------FERLRN 176
+ L+DLY K FD R + F ++
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI 236
++ V + M+T Y+KN P EA +F M V PN +NL+ A + L + + R +
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV 273
Query: 237 HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHI 296
H Y ++ ++ + +I Y+KCG LQ AR VF+ M+ + L +W SMIT HG
Sbjct: 274 HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCG 333
Query: 297 DEAIILFRLLQRE-NLRIDSVTLISLLQALSQLG 329
+EA+ LF ++ E ++ D++T + +L A + G
Sbjct: 334 EEALSLFEEMEEEASVEPDAITFVGVLSACANTG 367
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 32/254 (12%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
++ T ++ A S++ G +HG AI+ GF D F+ TL+D+Y KCG V
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 69 FGKMNATST-----------------------------TVGSWNPLIAAYLHNGQALEAF 99
F KM S V SW +I AY+ N + EAF
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 100 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY 159
+LFR+M V P+ T+ N + + +L L G+ +H Y + G D TAL+D+Y
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 160 SKF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKM-SVSPNVALF 217
SK + ARK+F+ ++ K +N M+T + EA+++F EM + SV P+ F
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITF 356
Query: 218 LNLISAVSDLRDIR 231
+ ++SA ++ +++
Sbjct: 357 VGVLSACANTGNVK 370
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ + PN T+V+LL A+ +LGSL GR +H YA + GF V D T L+DMY KCG
Sbjct: 242 MQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGF-VLDCFLGTALIDMYSKCG 300
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLAN 119
++ A VF M S + +WN +I + +G EA LF +M V PD +T
Sbjct: 301 SLQDARKVFDVMQGKS--LATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVG 358
Query: 120 AILSCAELDYLCHGKSIHGYMIRM-GVEPDMVACTALVDLYSK-FDVTKARKMFERL 174
+ +CA + G MI++ G+ P ++ L + +V KA + E +
Sbjct: 359 VLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 172/311 (55%), Gaps = 8/311 (2%)
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI-ILFRLLQRENL 311
N II + K G A+ V +++++W MI GYV + +EA+ L +L ++
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS--VNNSLITTYAKCGKLNMA 369
+ + + S L A ++LG L K VH L + G EL+ ++++L+ YAKCG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDS--GIELNAILSSALVDVYAKCGDIGTS 219
Query: 370 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
R +F + ++ WNAM+ +A HG E +++F+ M+ ++ PD +TF +LT CSH
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
GL+EEG + F M R ++I P HY ++DLL RAG++ EAY L++SMP +
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 490 LLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKEL 549
LLS+ R Y + E+GE IA Q L S YVL+SNI + +W+ +R + + +
Sbjct: 340 LLSSSRTYKNPELGE-IAIQ--NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 550 KSTPGYSLIEL 560
+ G S +E
Sbjct: 397 RKAKGKSWLEF 407
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 9/251 (3%)
Query: 42 GVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFEL 101
GVC+ +++ K G +A V NA+ V +WN +I Y+ N Q EA +
Sbjct: 97 GVCNI---NLIIESLMKIGESGLAKKVL--RNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 102 FRQMIH-RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS 160
+ M+ + P+ + A+++ +CA L L H K +H MI G+E + + +ALVD+Y+
Sbjct: 152 LKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYA 211
Query: 161 KF-DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLN 219
K D+ +R++F ++ D I+N M+TG+ + L EAI VF EM VSP+ FL
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLG 271
Query: 220 LISAVSDLRDIRLARSIHGYVLRHQYI-TRVEIANQIIHTYAKCGYLQYARLVFNRMR-S 277
L++ S + + G + R I ++E ++ + G ++ A + M
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 278 RDLVSWTSMIT 288
D+V W S+++
Sbjct: 332 PDVVIWRSLLS 342
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Query: 167 ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS-VSPNVALFLNLISAVS 225
A+K+ +++ + +N+M+ GY++N EA+ M+ + + PN F + ++A +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 226 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 285
L D+ A+ +H ++ +++ ++ YAKCG + +R VF ++ D+ W +
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
MITG+ HG EAI +F ++ E++ DS+T + LL S G L KE L R F
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 346 H-GKELSVNNSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGN 396
+L +++ + G++ A L + M E + W ++L + + N
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN+ + S L A A+LG L + +H I G + + I + L+D+Y KCG + +
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL-NAILSSALVDVYAKCGDIGTSRE 221
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF + ++ WN +I + +G A EA +F +M V PD +T + +C+
Sbjct: 222 VFYSVKRNDVSI--WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 128 DYLCHGKSIHGYMI-RMGVEPDMVACTALVDLYSKFD-VTKARKMFERLR-NKDAVIYNV 184
L GK G M R ++P + A+VDL + V +A ++ E + D VI+
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 185 MMT 187
+++
Sbjct: 340 LLS 342
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 228/495 (46%), Gaps = 95/495 (19%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
+ P+ + ++ +A + G L + GF D ++DMY K V+ A
Sbjct: 102 IMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGF-FKDPYVRNVIMDMYVKHESVESA 155
Query: 66 AAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
VF +++ + WN +I+ Y G EA +LF M
Sbjct: 156 RKVFDQISQRKGS--DWNVMISGYWKWGNKEEACKLFDMM-------------------- 193
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNKDAVIYNV 184
E D+V+ T ++ ++K D+ ARK F+R+ K V +N
Sbjct: 194 -------------------PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNA 234
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSI-------- 236
M++GY +N +A+ +F++M+++ V PN ++ +ISA S D L RS+
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 237 --------------HGYVLRHQYITRV--EIANQ--------IIHTYAKCGYLQYARLVF 272
H Q R+ E+ Q +I Y + G + AR +F
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 273 NRMRSRDLVSWTSMITGYVHHGHIDEAIILFR-LLQRENLRIDSVTLISLLQALSQLGCL 331
+ M R++VSW S+I GY H+G AI F ++ + + D VT+IS+L A + L
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 332 SAVKEVHCLTYRAFHGKELSVNNS----LITTYAKCGKLNMARYLFQQMTERCLTSWNAM 387
E+ ++ +N+S LI YA+ G L A+ +F +M ER + S+N +
Sbjct: 415 ----ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 388 LGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYT 447
A+A +G+ E L L + MK I+PD +T+TS+LTAC+ +GL++EG +IF+S IR
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKS-IRN-- 527
Query: 448 IVPGEVHYNCIIDLL 462
P HY C +DLL
Sbjct: 528 --PLADHYAC-MDLL 539
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 47/393 (11%)
Query: 142 RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN-KDAVIYNVMMTGYLKNDLPVEAIN 200
R G+ PD + ++ +F + + + E+L KD + NV+M Y+K++ A
Sbjct: 99 RCGIMPDAFSFPVVIKSAGRFGIL-FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARK 157
Query: 201 VFHEMIKMSVSP-NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTY 259
VF ++ + S NV +IS + A + + + ++ +I +
Sbjct: 158 VFDQISQRKGSDWNV-----MISGYWKWGNKEEACKLFDMMPENDVVS----WTVMITGF 208
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
AK L+ AR F+RM + +VSW +M++GY +G ++A+ LF + R +R + T +
Sbjct: 209 AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 320 SLLQALS--------------------QLGCL--SAVKEVHCL------TYRAFH----G 347
++ A S +L C +A+ ++H R F+
Sbjct: 269 IVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ 328
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHM 407
+ L N++I+ Y + G ++ AR LF M +R + SWN+++ YA +G A ++ F M
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Query: 408 -KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
G+ KPDE+T S+L+AC H +E G I IR+ I + Y +I + +R G
Sbjct: 389 IDYGDSKPDEVTMISVLSACGHMADLELGDCIV-DYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 467 QLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD 499
L EA + M + TL +A GD
Sbjct: 448 NLWEAKRVFDEM-KERDVVSYNTLFTAFAANGD 479
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 17/247 (6%)
Query: 267 YARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
Y RL+F+ + ++ SM + ++ + L+ R + D+ + ++++
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 327 QLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNA 386
+ G L L + K+ V N ++ Y K + AR +F Q+++R + WN
Sbjct: 118 RFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 387 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 446
M+ Y GN E KLF+ M + D +++T ++T + +E + F M +
Sbjct: 173 MISGYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM---PSTHSSAALCTLLSACRLYGDTEIG 503
V +N ++ ++ G +A L M + ++SAC D +
Sbjct: 229 V-----VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 504 EAIAKQI 510
++ K I
Sbjct: 284 RSLVKLI 290
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 220/500 (44%), Gaps = 60/500 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + P+ + +L+ K G L G + A+ +G + +F +T+ D+Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI-DVYVKSG 370
Query: 61 GVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A+ V+ +M S V ++ LI +G+ EAF ++ Q++ R + P ++T +
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---------FDVTKARK 169
+ I + L G +++ MI+MG PD+V LVD SK F V K
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV----K 486
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
M + + V++N ++ G+ + + EA+ VF M + P+VA F ++ VS + D
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR-VSIMED 545
Query: 230 I-------RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM----RSR 278
+ + + R++ + + N +IH KC ++ A FN +
Sbjct: 546 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 605
Query: 279 DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 338
D+V++ +MI GY +DEA +F LL+ ++VTL L+ L +
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK----------- 654
Query: 339 CLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYA 398
NN + G + M + ++ ++ ++ ++ ++ +
Sbjct: 655 --------------NNDMD------GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 399 EVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 458
KLF M+ I P ++++ I+ G V+E IF I + ++P V Y +
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAIL 753
Query: 459 IDLLSRAGQLTEAYNLVKSM 478
I + G+L EA L + M
Sbjct: 754 IRGYCKVGRLVEAALLYEHM 773
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/498 (19%), Positives = 223/498 (44%), Gaps = 46/498 (9%)
Query: 24 GSLQEGRAIHGYAIRRGFGV----CDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATST 77
G + + H + RGF V C+++ + +D +++A+ + + +
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ------IEVASRLLSLVLDCGPAP 284
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 137
V ++ LI + G+ AF+LF+ M R + PDL+ + I + L G +
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 138 GYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR----NKDAVIYNVMMTGYLKN 192
+ GV+ D+V ++ +D+Y K D+ A +++R+ + + V Y +++ G ++
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
EA ++ +++K + P++ + +LI ++R +++ +++ Y V I
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
++ +K G + +A +M + ++V + S+I G+ DEA+ +FRL+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 309 ENLRIDSVTLISLLQALSQLGCLSAVKEVHC-------------LTYRAFHGKELSVNNS 355
++ D T ++++ +S +++ C L R +++V N
Sbjct: 525 YGIKPDVATFTTVMR-------VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 356 LITTYAKCGKLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGN 411
+I KC ++ A F + E + ++N M+ Y E ++F +K+
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
P+ +T T ++ + ++ +++F S++ E P V Y C++D S++ + +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 472 YNLVKSMPSTHSSAALCT 489
+ L + M S ++ +
Sbjct: 697 FKLFEEMQEKGISPSIVS 714
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN VTL L+H K + + +G + + L+D + K ++ +
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFK 698
Query: 68 VFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M S ++ S++ +I G+ EA +F Q I K+LPD++ A I
Sbjct: 699 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Query: 126 ELDYLCHGKSIHGYMIRMGVEPD 148
++ L ++ +M+R GV+PD
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPD 781
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 50 TTLLDMYHKCGGVKMAAAVF-----GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
++ + KC ++ A+ F GKM T +N +I Y + EA +F
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT---YNTMICGYCSLRRLDEAERIFEL 632
Query: 105 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM-------GVEPDMVACTALVD 157
+ P+ +TL I LC + G IRM G +P+ V L+D
Sbjct: 633 LKVTPFGPNTVTLTILI------HVLCKNNDMDG-AIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 158 LYSK-FDVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
+SK D+ + K+FE ++ K V Y++++ G K EA N+FH+ I + P
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
+V + LI + + A ++ ++LR+
Sbjct: 746 DVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/552 (21%), Positives = 249/552 (45%), Gaps = 25/552 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M R +P+ V LL A AK+ + I + G+ +++ + ++ + +
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFE--LVISLGEQMQTLGISHDLYTYSIFINCFCRR 131
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ +A AV KM + + + L+ Y H+ + +A L QM+ PD T
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
I + ++ M++ G +PD+V +V+ L + D+ A + +++
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 177 ----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D VIYN ++ G K +A+N+F EM + P+V + +LIS + +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 288
A + ++ + V + +I + K G L A +++ M R D+ +++S+I
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHG 347
G+ H +DEA +F L+ ++ + VT +L++ + + E+ ++ R G
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTE----RCLTSWNAMLGAYAMHGNYAEVLKL 403
++ +LI + + + A+ +F+QM + ++N +L +G A+ + +
Sbjct: 432 NTVTYT-TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F +++ ++PD T+ ++ +G VE+G ++F ++ + + P + YN +I
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFC 549
Query: 464 RAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
R G EA +L+K M +S TL+ A GD E + K++ +S
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 609
Query: 521 YV-LISNILAEG 531
+ L++N+L +G
Sbjct: 610 TIGLVTNMLHDG 621
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 19/295 (6%)
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYITRVEIA 252
+A+++F +M+K P++ F L+SAV+ + I L + + H T
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT----Y 121
Query: 253 NQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
+ I+ + + L A V +M D+V+ +S++ GY H I +A+ L +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 309 ENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
+ D+ T +L+ L S AV V + R +L +++ K G ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ-PDLVTYGTVVNGLCKRGDID 240
Query: 368 MARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
+A L ++M E + +N ++ + + + L LF M I+PD T++S++
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ + G + ++ MI E I P V ++ +ID + G+L EA L M
Sbjct: 301 SCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 212/502 (42%), Gaps = 62/502 (12%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL-------------- 127
+ LI +L N + +A + ++M + + PD+ + I+ ++
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 128 ------DYLCHGKSIHGY---------------MIRMGVEPDMVACTALVDLY-SKFDVT 165
+ +G I GY M GV P+ V CT L++ Y K V
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 166 KA----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 221
+A R M ++ DA Y V+M G KND +A +F EM ++P+V + LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 222 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL- 280
+ S L +++ A SI ++ V I N ++ + + G ++ A+ + + M + L
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 281 ---VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
V++ ++I GY G + EA LF ++ + L DS +L+ +L + +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 338 HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL--------TSWNAMLG 389
T + + N+LI K GK + + ++ + ++N M+
Sbjct: 755 FG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
GN +LF+ M+ N+ P +T+TS+L G E +F I I
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIE 872
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTL-LSACRL-------YGDTE 501
P + Y+ II+ + G T+A LV M + ++ C L +S CR G+ E
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
Query: 502 IGEAIAKQILKLEPRNSSSYVL 523
+ E + + +++L+ S+ V+
Sbjct: 933 VAEKVMENMVRLQYIPDSATVI 954
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/496 (19%), Positives = 193/496 (38%), Gaps = 57/496 (11%)
Query: 58 KCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL 115
K G ++ A A+F M A+ ++ LI Y + +EL +M R ++
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 116 TLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLR 175
T + L +I MI G P++V
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV------------------------- 453
Query: 176 NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
IY ++ +L+N +A+ V EM + ++P++ + +LI +S + + ARS
Sbjct: 454 -----IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYV 291
++ + I Y + A MR + V T +I Y
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 351
G + EA +R + + + D+ T L+ L + + +E+ +R GK ++
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI----FREMRGKGIA 624
Query: 352 VN----NSLITTYAKCGKLNMARYLFQQMTERCLTS----WNAMLGAYAMHGNYAEVLKL 403
+ LI ++K G + A +F +M E LT +N +LG + G + +L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
+ M + + P+ +T+ +I+ SG + E ++F M + +VP Y ++D
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCC 743
Query: 464 RAGQLTEAYNLVKSMPS--THSSAALCTLLSACRLYGDTEIGEAIAKQILK------LEP 515
R + A + + S+A L++ +G TE+ + +++ +P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 516 RNSSSYVLISNILAEG 531
+ + ++I + EG
Sbjct: 804 NDVTYNIMIDYLCKEG 819
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 181/459 (39%), Gaps = 39/459 (8%)
Query: 4 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDE--------------IFE 49
+R+ R LV ++ K + G I GY F D+ +
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 50 TTLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIH 107
T L++ Y K G V A + + M ++ L+ N + +A E+FR+M
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 108 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTK 166
+ + PD+ + I ++L + SI M+ G+ P+++ L+ + + ++ K
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 167 ARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
A+++ + + K +AV Y ++ GY K+ EA +F EM + P+ ++ L+
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 223 AVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL-- 280
L D+ A +I G + + N +I+ K G + V NR+
Sbjct: 741 GCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 281 ------VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
V++ MI G+++ A LF +Q NL +T SLL ++G + +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER---------CLTSWN 385
V A + + + +I + K G A L QM + +++
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 386 AMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
A+L +A G K+ +M PD T ++
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 123/557 (22%), Positives = 242/557 (43%), Gaps = 26/557 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M R +P+ V LL A AK+ I GV ++ +++ +
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFD--LVISFGEKMEILGVSHNLYTYNIMINCLCRR 113
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ A A+ GKM ++ + N L+ + H + EA L QM+ PD +T
Sbjct: 114 SQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 173
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
+ + + ++ M+ G +PD+V A+++ L + + A + ++
Sbjct: 174 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 177 ----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D VIY+ ++ K +A+N+F EM + P+V + +LIS + +
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 288
A + +L + V N +I +AK G L A +F+ M R ++V++ S+I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG-CLSAVKEVHCLTYRAFHG 347
G+ H +DEA +F L+ ++ D VT +L+ + + ++ ++ R G
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKL 403
++ +LI + + + A+ +F+QM + ++N +L +G + + +
Sbjct: 414 NTVTYT-TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F +++ ++PD T+ + +G VE+G +F S+ + + P + YN +I
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISGFC 531
Query: 464 RAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKLE-PRNSS 519
+ G EAY L M S TL+ A GD + K++ ++S
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAS 591
Query: 520 SYVLISNILAEGGRWDE 536
+Y L++++L + GR D+
Sbjct: 592 TYGLVTDMLHD-GRLDK 607
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
EA+++F EM+K P++ F L+SA++ ++ L S + + N +I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 257 HTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
+ + L +A + +M +V+ S++ G+ H I EA+ L + +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 313 IDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
D+VT +L+ L Q S AV V + + +L ++I K G+ ++A
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPDLALN 226
Query: 372 LFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACS 427
L +M E + ++ ++ + + + + L LF M I+PD T++S+++
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 428 HSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ G + ++ M+ E I P V +N +ID ++ G+L EA L M
Sbjct: 287 NYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 222/499 (44%), Gaps = 25/499 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
MQ+ R+ + + L++ + L A+ G ++ G+ D + ++LL+ Y C
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP-DIVTLSSLLNGY--CH 162
Query: 61 GVKMAAAV-----FGKMNATSTTVGSWNPLI-AAYLHNGQALEAFELFRQMIHRKVLPDL 114
G +++ AV M TV ++N LI +LHN +A EA L +M+ R PDL
Sbjct: 163 GKRISEAVALVDQMFVMEYQPNTV-TFNTLIHGLFLHN-KASEAVALIDRMVARGCQPDL 220
Query: 115 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFER 173
T + + + S+ M + +E D+V T ++D + +V A +F
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 174 LRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
+ NK + V YN ++ +A + +MI+ ++PNV F LI A
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD----LVSWTS 285
+ A ++ +++ + + +I+ + L A+ +F M S+D +V++ +
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
+I G+ ++E + LFR + + L ++VT +L+Q L Q G +++
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 346 HGKELSVNNSLITTYAKCGKLNMA----RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
++ + L+ K GKL A YL + E + ++N M+ G +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
LF + L +KP+ + +T++++ GL EE +FR M +E +P YN +I
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM-KEDGTLPNSGTYNTLIRA 579
Query: 462 LSRAGQLTEAYNLVKSMPS 480
R G + L+K M S
Sbjct: 580 RLRDGDKAASAELIKEMRS 598
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 204/470 (43%), Gaps = 42/470 (8%)
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
+A +LF +M+ + LP ++ + + A+++ S+ M + + D+ + L+
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 157 DLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 211
+ + S+ + A KM + D V + ++ GY EA+ + +M M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 212 PNVALFLNLI---------SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKC 262
PN F LI S L D +AR + + +++ K
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY---------GTVVNGLCKR 233
Query: 263 GYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTL 318
G + A + +M D+V +T++I ++ ++++A+ LF + + +R + VT
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 319 ISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT 377
SL++ L G S A + + + R + ++ ++LI + K GKL A L+ +M
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF-SALIDAFVKEGKLVEAEKLYDEMI 352
Query: 378 ERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
+R + ++++++ + MH E +F M + P+ +T+ +++ + VE
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT---L 490
EG+++FR M + +V V YN +I L +AG A + K M S + T L
Sbjct: 413 EGMELFREM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 491 LSACRLYGDTEIGEAIAK--QILKLEPRNSSSYVLISNILAEG---GRWD 535
L YG E + + Q K+EP + ++I + G WD
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/498 (21%), Positives = 208/498 (41%), Gaps = 59/498 (11%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + P+ + +L+ K G L G + A+ +G + +F +T+ D+Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI-DVYVKSG 370
Query: 61 GVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A+ V+ +M S V ++ LI +G+ EAF ++ Q++ R + P ++T +
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---------FDVTKARK 169
+ I + L G +++ MI+MG PD+V LVD SK F V K
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV----K 486
Query: 170 MFERLRNKDAVIYNVMMTGY--------------------LKNDLPV------------- 196
M + + V++N ++ G+ +K D+
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 197 --EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 254
EA+ +F M KM + P+ + LI A + + + R++ + + N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 255 IIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHGHIDEAIILFRLLQREN 310
+IH KC ++ A FN + D+V++ +MI GY +DEA +F LL+
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
++VTL L+ L + + + + L+ ++K + +
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 371 YLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
LF++M E+ ++ S++ ++ G E +F+ + PD + + ++
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 427 SHSGLVEEGLQIFRSMIR 444
G + E ++ M+R
Sbjct: 787 CKVGRLVEAALLYEHMLR 804
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/521 (19%), Positives = 226/521 (43%), Gaps = 63/521 (12%)
Query: 24 GSLQEGRAIHGYAIRRGFGV----CDEIFETTLLDMYHKCGGVKMAAAVFGKM--NATST 77
G + + H + RGF V C+++ + +D +++A+ + + +
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ------IEVASRLLSLVLDCGPAP 284
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIH 137
V ++ LI + G+ AF+LF+ M R + PDL+ + I + L G +
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 138 GYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR----NKDAVIYNVMMTGYLKN 192
+ GV+ D+V ++ +D+Y K D+ A +++R+ + + V Y +++ G ++
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
EA ++ +++K + P++ + +LI ++R +++ +++ Y V I
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
++ +K G + +A +M + ++V + S+I G+ DEA+ +FRL+
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 309 ENLRIDSVTLISLLQA----------------LSQLGCLSAVKEVHCLTYRAF--HGK-- 348
++ D T ++++ + ++G L +C AF H K
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG-LEPDALAYCTLIDAFCKHMKPT 583
Query: 349 ----------------ELSVNNSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAML 388
+++V N +I KC ++ A F + E + ++N M+
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 389 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 448
Y E ++F +K+ P+ +T T ++ + ++ +++F S++ E
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGS 702
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
P V Y C++D S++ + ++ L + M S ++ +
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 158/381 (41%), Gaps = 20/381 (5%)
Query: 130 LCHGK-----SIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN----KDAV 180
C G+ H ++ G +V+C ++ S + A ++ + + + V
Sbjct: 228 FCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVV 287
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+ ++ G+ K A ++F M + + P++ + LI + + +
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHI 296
L V + + I Y K G L A +V+ RM S ++V++T +I G G I
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
EA ++ + + + VT SL+ + G L + ++ + + ++ + L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 357 ITTYAKCG-KLNMARY---LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
+ +K G L+ R+ + Q + +N+++ + + E LK+F M + I
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
KPD TFT+++ G +EE L +F M + + P + Y +ID + + T
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 473 NLVKSMPSTHSSA--ALCTLL 491
L M SA A+C ++
Sbjct: 587 QLFDLMQRNKISADIAVCNVV 607
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN VTL L+H K + + +G + + L+D + K ++ +
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 68 VFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M S ++ S++ +I G+ EA +F Q I K+LPD++ A I
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 126 ELDYLCHGKSIHGYMIRMGVEPD 148
++ L ++ +M+R GV+PD
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPD 810
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 27/211 (12%)
Query: 50 TTLLDMYHKCGGVKMAAAVF-----GKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
++ + KC ++ A+ F GKM T +N +I Y + EA +F
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT---YNTMICGYCSLRRLDEAERIFEL 661
Query: 105 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRM-------GVEPDMVACTALVD 157
+ P+ +TL I LC + G IRM G +P+ V L+D
Sbjct: 662 LKVTPFGPNTVTLTILI------HVLCKNNDMDG-AIRMFSIMAEKGSKPNAVTYGCLMD 714
Query: 158 LYSK-FDVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
+SK D+ + K+FE ++ K V Y++++ G K EA N+FH+ I + P
Sbjct: 715 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 774
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRH 243
+V + LI + + A ++ ++LR+
Sbjct: 775 DVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 222/513 (43%), Gaps = 82/513 (15%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGS----LQEGRAIHGYAIRRGFGVCDEIFETTLLDMY 56
M R +P+ V LL A KL + G+ + IR D +++ +
Sbjct: 76 MVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN-----DLYTFNIVINCF 130
Query: 57 HKCGGVKMAAAVFGKM-----NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVL 111
C V +A ++ GKM T+GS L+ + + +A L +M+
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGS---LVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 112 PDLLTLANAILSCAELDYLCHGKSIHGY------MIRMGVEPDMVACTALVD--LYSKFD 163
PD++ NAI+ D LC K ++ + R G+ P++V TALV+ S
Sbjct: 188 PDIVAY-NAII-----DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 164 VTKARKMFERLRNK---DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
AR + + ++ K + + Y+ ++ ++KN +EA +F EM++MS+ P++ + +L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
I+ + +H R++ ANQ+ G L D+
Sbjct: 302 INGL----------CLH---------DRIDEANQMFDLMVSKGCLA------------DV 330
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
VS+ ++I G+ +++ + LFR + + L ++VT +L+Q Q G + +E
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF--F 388
Query: 341 TYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLGAYAMH 394
+ F G ++ N L+ G+L A +F+ M +R + ++ ++
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 395 GNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVH 454
G E LF + L +KPD +T+T++++ GL+ E ++ M +E G +
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE-----GLMK 503
Query: 455 YNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAAL 487
+C + G +T + L+K M S + +L
Sbjct: 504 NDCTLS----DGDITLSAELIKKMLSCGYAPSL 532
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 142/326 (43%), Gaps = 46/326 (14%)
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYIT----- 247
+AI++F +M+K P++ F L+SA+ L+ I L + + +R+ T
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 248 -------RVEIANQIIHTYAKCGY----LQYARLV--FNRMRSR---------------- 278
+V +A I+ K GY + LV F R R+R
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGY 186
Query: 279 --DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
D+V++ ++I +++A F+ ++R+ +R + VT +L+ L S
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 337 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAMLGAYA 392
+ + + ++L+ + K GK+ A+ LF++M + + ++++++
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 452
+H E ++F+ M D +++ +++ + VE+G+++FR M + +V
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNT 365
Query: 453 VHYNCIIDLLSRAGQLTEAYNLVKSM 478
V YN +I +AG + +A M
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQM 391
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/560 (21%), Positives = 241/560 (43%), Gaps = 32/560 (5%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQE----GRAIHGYAIRRGFGVCDEIFETTLLDMY 56
M R P+ V LL A AK+ G + I G L++ +
Sbjct: 76 MVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYT-----YNILINCF 130
Query: 57 HKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDL 114
+ + +A A+ GKM ++ + + L+ Y H + +A L QM+ PD
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 115 LTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFER 173
+T I + ++ M++ G +P++V +V+ L + D A + +
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 174 LR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
+ D VI+N ++ K +A+N+F EM + PNV + +LIS +
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTS 285
A + ++ + + N +I + K G A +++ M R D+ ++ S
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRA 344
++ G+ H +D+A +F + ++ D VT +L++ + + E+ +++R
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 345 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEV 400
G ++ +LI G + A+ +F+QM + +++ +L +G +
Sbjct: 431 LVGDTVTYT-TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 401 LKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIID 460
L++F++M+ IK D +T+++ +G V++G +F S+ + + P V YN +I
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMIS 548
Query: 461 LLSRAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRN 517
L L EAY L+K M +S TL+ A GD + +++
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608
Query: 518 SSSYV-LISNILAEGGRWDE 536
+S + L++N+L + GR D+
Sbjct: 609 DASTIGLVANMLHD-GRLDK 627
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/495 (19%), Positives = 202/495 (40%), Gaps = 55/495 (11%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
A S+ G + ++ LH+ + +A LF M+ + LP ++ + + A++
Sbjct: 45 AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVV 104
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTG 188
S+ M R+ + + L++ + S+ + A KM + V + ++ G
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
Y +A+ + +M++M P+ F LI HG L ++
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLI---------------HGLFLHNKASEA 209
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
V + ++++ R +LV++ ++ G G D A+ L ++
Sbjct: 210 VALVDRMVQ----------------RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 309 ENLRIDSVTLISLLQALSQL----GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+ D V +++ +L + L+ KE+ R + +SLI+ G
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP----NVVTYSSLISCLCSYG 309
Query: 365 KLNMARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
+ + A L M E+ L ++NA++ A+ G + E KL++ M +I PD T+
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 421 SILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMP 479
S++ C H L ++ Q+F M+ + P V YN +I ++ ++ + L + M
Sbjct: 370 SLVNGFCMHDRL-DKAKQMFEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 480 S---THSSAALCTLLSACRLYGDTEIGEAIAKQILKLE-PRNSSSYVLISNILAEGGRWD 535
+ TL+ GD + + + KQ++ P + +Y ++ + L G+ +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 536 EVAHIRAMTKDKELK 550
+ + + E+K
Sbjct: 488 KALEVFDYMQKSEIK 502
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 138/312 (44%), Gaps = 13/312 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M ++++ PN VT +L+ A K G E ++ I+R + +IF +L++ +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--SIDPDIFTYNSLVNGFCMH 378
Query: 60 GGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ A +F M + V ++N LI + + + + ELFR+M HR ++ D +T
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
I + + + M+ GV PD++ + L+D L + + KA ++F+ ++
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 177 K----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D IY M+ G K + ++F + V PNV + +IS + R ++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV---SWTSMITG 289
A ++ + + N +I + + G + + MRS V S ++
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Query: 290 YVHHGHIDEAII 301
+H G +D++ +
Sbjct: 619 MLHDGRLDKSFL 630
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 6/261 (2%)
Query: 260 AKCGYLQYARLVFNRMRSRDLVSWTSMI----TGYVHHGHIDEAIILFRLLQRENLRIDS 315
AK L R + N + + L +T ++ + HG + +A+ +L N +D
Sbjct: 195 AKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDL 254
Query: 316 VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 375
L+ L + + L K VH + +LS N+ L+ Y+ CG N A +F++
Sbjct: 255 SRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEK 314
Query: 376 MTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKL-GNIKPDELTFTSILTACSHSGLVEE 434
M+E+ L +W ++ +A +G + + +F+ K GNI PD F I AC G V+E
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDVDE 373
Query: 435 GLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSAC 494
GL F SM R+Y I P Y ++++ + G L EA V+ MP + TL++
Sbjct: 374 GLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLS 433
Query: 495 RLYGDTEIGEAIAKQILKLEP 515
R++G+ E+G+ A+ + L+P
Sbjct: 434 RVHGNLELGDYCAEVVEFLDP 454
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Query: 11 VTLVSLLHAAAKLGS---LQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
V L LL A G LQE + +HG I D LL+MY CG AA+
Sbjct: 252 VDLSRLLRLAKICGEAEGLQEAKTVHG-KISASVSHLDLSSNHVLLEMYSNCGLANEAAS 310
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAEL 127
VF KM + + +W +I + NG +A ++F + +PD +C L
Sbjct: 311 VFEKM--SEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGML 368
Query: 128 DYLCHGKSIHGYMIR-MGVEPDMVACTALVDLYS 160
+ G M R G+ P + +LV++Y+
Sbjct: 369 GDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 33/257 (12%)
Query: 181 IYNVMMTGYLK--NDLPVEAINVF--HEMIK-----------MSVSPNVALFLNLISAVS 225
+ N + YLK D+ +E + F H +K M+ +++ L L
Sbjct: 206 LVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICG 265
Query: 226 DLRDIRLARSIHGYVLRHQYITRVEIANQ--IIHTYAKCGYLQYARLVFNRMRSRDLVSW 283
+ ++ A+++HG + ++ +++++ ++ Y+ CG A VF +M ++L +W
Sbjct: 266 EAEGLQEAKTVHGKI--SASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE--VHCLT 341
+I + +G ++AI +F + E D + A LG V E +H +
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLG---DVDEGLLHFES 380
Query: 342 YRAFHGKELSVNN--SLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNY- 397
+G S+ + SL+ YA G L+ A ++M E + W ++ +HGN
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLE 440
Query: 398 -----AEVLKLFNHMKL 409
AEV++ + +L
Sbjct: 441 LGDYCAEVVEFLDPTRL 457
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 212/495 (42%), Gaps = 21/495 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSL-QEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKC 59
M+ + P+ T +L+ K GSL QE + GF D++ LLD+Y K
Sbjct: 270 MKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYGKS 327
Query: 60 GGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
K A V +M N S ++ ++N LI+AY +G EA EL QM + PD+ T
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLR- 175
+ + SI M G +P++ A + +Y ++ T+ K+F+ +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 176 ---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
+ D V +N ++ + +N + E VF EM + P F LISA S
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMIT 288
A +++ +L + N ++ A+ G + + V M + +++ S++
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHG 347
Y + I L + + +V L +L+ S+ L A + L R F
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF-S 626
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKL 403
+++ NS+++ Y + + A + M ER T ++N+++ ++ ++ + ++
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
+ IKPD +++ +++ A + + + +IF M R IVP + YN I +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYA 745
Query: 464 RAGQLTEAYNLVKSM 478
EA +V+ M
Sbjct: 746 ADSMFEEAIGVVRYM 760
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 192/480 (40%), Gaps = 80/480 (16%)
Query: 52 LLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
++ M K G V AA +F + + S V S+ LI+A+ ++G+ EA +F++M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 110 VLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARK 169
P L+T N IL+ + G +MG + + T+LV+ K
Sbjct: 239 CKPTLITY-NVILN------------VFG---KMGTPWNKI--TSLVE-----------K 269
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
M DA YN ++T + L EA VF EM S + +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTY------------ 317
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTS 285
N ++ Y K + A V N M S +V++ S
Sbjct: 318 -----------------------NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAF 345
+I+ Y G +DEA+ L + + + D T +LL + G + + + A
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 346 HGKELSVNNSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVL 401
+ N+ I Y GK +F ++ + +WN +L + +G +EV
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDL 461
+F MK P+ TF ++++A S G E+ + ++R M+ + + P YN ++
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAA 533
Query: 462 LSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGD-TEIG--EAIAKQILK--LEPR 516
L+R G ++ ++ M T S Y + EIG ++A+++ +EPR
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 108/284 (38%), Gaps = 39/284 (13%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+D R PN +T SLLHA A +G I + +E++
Sbjct: 550 MEDGRCKPNELTYCSLLHAYA-----------NGKEIGLMHSLAEEVY-----------S 587
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
GV AV K T V S L+ EA F ++ R PD+ TL +
Sbjct: 588 GVIEPRAVLLK---TLVLVCSKCDLLP---------EAERAFSELKERGFSPDITTLNSM 635
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK-- 177
+ + + YM G P M +L+ ++S+ D K+ ++ + K
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 178 --DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
D + YN ++ Y +N +A +F EM + P+V + I + + A
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRD 279
+ Y+++H N I+ Y K A+L +R+ D
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 200/443 (45%), Gaps = 54/443 (12%)
Query: 90 LHNGQALEAFELFRQMIHRKVLP---DLLTLANAILSCAELD------------------ 128
LH+ Q EA +LF M+ + LP D L N I + D
Sbjct: 48 LHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDL 107
Query: 129 YLCH--------------GKSIHGYMIRMGVEPDMVACTALVDLYSKFD-----VTKARK 169
Y C+ S G M+++G EPD+V T+L++ + + ++ +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 170 MFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRD 229
M E D V+Y ++ KN A+++F +M + P+V ++ +L++ + +
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTS 285
R A S+ + + + V N +I + K G A ++N M + ++ ++TS
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRA 344
+I G+ G +DEA +F L++ + D V SL+ + + A+K + ++ +
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 345 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEV 400
G ++ +LI + + GK N+A+ +F M R + ++N +L +G +
Sbjct: 348 LTGNTITYT-TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 401 LKLFNHMK---LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNC 457
L +F M+ + + P+ T+ +L ++G +E+ L +F M R+ + G + Y
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM-RKREMDIGIITYTI 465
Query: 458 IIDLLSRAGQLTEAYNLVKSMPS 480
II + +AG++ A NL S+PS
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPS 488
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 177/385 (45%), Gaps = 15/385 (3%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ VT SL++ ++E ++ + G D + TT++D K G V A +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP-DVVMYTTIIDSLCKNGHVNYALS 198
Query: 68 VFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M V + L+ ++G+ +A L R M RK+ PD++T I +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS-KFDVTKARKMFERLRNK----DAV 180
+ + ++ MIRM + P++ T+L++ + + V +AR+MF + K D V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
Y ++ G+ K +A+ +F+EM + ++ N + LI + +A+ + ++
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVS-----WT--SMITGYVHH 293
+ + N ++H G ++ A ++F M+ R++ WT ++ G ++
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
G +++A+++F +++ + I +T ++Q + + G + + C +
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 354 NSLITTYAKCGKLNMARYLFQQMTE 378
++I+ + G + A LF++M E
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKE 523
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 170/411 (41%), Gaps = 51/411 (12%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
N L+ + + Q A +M+ PD++T + I + + S+ M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 143 MGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN----KDAVIYNVMMTGYLKNDLPVE 197
MG++PD+V T ++D L V A +F+++ N D V+Y ++ G + +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 198 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
A ++ M K + P+V F LI A A ++ ++R + +I+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 258 TYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRI 313
+ G + AR +F M ++ D+V++TS+I G+ +D+A+ +F + ++ L
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 314 DSVTLISLLQALSQLGCLSAVKEV--------------------HCLTYRAFHGKELSVN 353
+++T +L+Q Q+G + +EV HCL Y K L +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 354 NSL-----------ITTY-----AKC--GKLNMARYLFQQMTERCLTSWNAMLG----AY 391
+ I TY C GKL A +F+ M +R +
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 392 AMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
G + LF + +KP+ +T+T++++ GL E +FR M
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 196/428 (45%), Gaps = 25/428 (5%)
Query: 82 WNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
++ LI Y+ + + L+ +F+ MI + +LP++ TL+ + + + + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 141 IRMGVEPDMVACTALV-DLYSKFDVTKARKMFERLR----NKDAVIYNVMMTGYLKNDLP 195
+ +G+ PD+ T ++ L D+++A++M + + + V YNV++ G K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 196 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQI 255
EA+ + ++ + P+V + L+ + +++ + + +L ++ + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 256 IHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
+ K G ++ A + R+ S +L + ++I EA +LF + + L
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN--NSLITTYAKCGKLNMA 369
R + VT L+ + G L + L G +LSV NSLI + K G ++ A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTA--LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 370 RYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
+M E + ++ +++G Y G + L+L++ M I P TFT++L+
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------P 479
+GL+ + +++F M E+ + P V YN +I+ G +++A+ +K M P
Sbjct: 517 LFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 480 STHSSAAL 487
T+S L
Sbjct: 576 DTYSYRPL 583
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 207/496 (41%), Gaps = 46/496 (9%)
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
S + + + L+ G+ EA L ++++ V P+L + NA++ D LC G+
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF-VYNALI-----DSLCKGRK 382
Query: 136 IH------GYMIRMGVEPDMVACTALVDLY---SKFDVTKA--RKMFERLRNKDAVIYNV 184
H M ++G+ P+ V + L+D++ K D + +M + YN
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
++ G+ K A EMI + P V + +L+ I A ++ +
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 245 YITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAI 300
+ ++ + G ++ A +FN M ++ V++ MI GY G + +A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN----NSL 356
+ + + + D+ + L+ L G S K + H +N L
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK----VFVDGLHKGNCELNEICYTGL 618
Query: 357 ITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
+ + + GKL A + Q+M +R L + ++ H + L M +
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
KPD++ +TS++ A S +G +E I+ MI E VP EV Y +I+ L +AG + EA
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 473 NL------VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIA--KQILKLEPRNSSSYVLI 524
L V S+P+ + +L+ G+ ++ +A+ ILK N+++Y ++
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTK----GEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 525 SNILAEGGRWDEVAHI 540
GR +E + +
Sbjct: 794 IRGFCRQGRIEEASEL 809
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 190/476 (39%), Gaps = 83/476 (17%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M +++L P VT SL+ G + +A+ Y G G+ I+ TTLL +
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKIN--KALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 60 GGVKMAAAVFGKM---NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 116
G ++ A +F +M N V ++N +I Y G +AFE ++M + ++PD +
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRV-TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 117 LANAILS-C-------------------AELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
I C EL+ +C+ +HG+ +E + C
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC---- 635
Query: 157 DLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
++M +R + D V Y V++ G LK+ + EM + P+ +
Sbjct: 636 -----------QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
+ ++I A S D + A I L+ N
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWD-------------------------------LMINEGC 713
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVK- 335
+ V++T++I G G ++EA +L +Q + + VT L L++ G + K
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKA 772
Query: 336 -EVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-----TERCLTSWNAMLG 389
E+H + + N LI + + G++ A L +M + C+T + M+
Sbjct: 773 VELHNAILKGLLANT-ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT-YTTMIN 830
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIRE 445
+ + ++L+N M I+PD + + +++ C +G + + ++ M+R+
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 177/407 (43%), Gaps = 41/407 (10%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
++N LI+AY G EAFEL M + P + T I + K + M
Sbjct: 272 TYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM 331
Query: 141 IRMGVEPDMVACTALV-DLYSKFDVTKARKMFERLRNKDAV----IYNVMMTGYLKNDLP 195
+R G+ PD +L+ + K DV + K+F +R++D V ++ MM+ + ++
Sbjct: 332 LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 196 VEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQI 255
+A+ F+ + + + P+ ++ LI I +A ++ +L+ V N I
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 256 IHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
+H K L A +FN M R D + T +I G+ G++ A+ LF+ ++ + +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARY 371
R+D VT +LL ++G + KE+ + KE+ L T
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEI----WADMVSKEI-----LPTP------------ 550
Query: 372 LFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 431
S++ ++ A G+ AE ++++ M NIKP + S++ SG
Sbjct: 551 ----------ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+G MI E VP + YN +I R +++A+ LVK M
Sbjct: 601 ASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/484 (21%), Positives = 211/484 (43%), Gaps = 25/484 (5%)
Query: 49 ETTLLDMYHKCGGVKMAAAVFGKMNATSTTVGS----WNPLIAAYLHNGQALEAFELFRQ 104
++ LL M + G ++ + +++T + GS ++ LI Y+ + EA E F
Sbjct: 133 QSCLLRMIRRSGVSRLE--IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF-T 189
Query: 105 MIHRKVLPDLLTLANAIL-SCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-F 162
++ K + NA++ S + ++ ++ + R GV ++ +V+ K
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 163 DVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 218
+ K +++ K D V YN +++ Y L EA + + M SP V +
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
+I+ + A+ + +LR ++ K G + VF+ MRSR
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 279 D----LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
D LV ++SM++ + G++D+A++ F ++ L D+V L+Q + G +S
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGA 390
+ + ++ N+++ K L A LF +MTER L + ++
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 391 YAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
+ GN ++LF MK I+ D +T+ ++L G ++ +I+ M+ + I+P
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILP 548
Query: 451 GEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLY---GDTEIGEAIA 507
+ Y+ +++ L G L EA+ + M S + + S + Y G+ GE+
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 508 KQIL 511
++++
Sbjct: 609 EKMI 612
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/487 (20%), Positives = 206/487 (42%), Gaps = 19/487 (3%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAV 68
N TL +++A K G +++ +G D + TL+ Y G ++ A +
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGV-YPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 69 FGKMNATSTTVG--SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAE 126
M + G ++N +I +G+ A E+F +M+ + PD T + ++ +
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRN----KDAVI 181
+ + + M V PD+V ++++ L+++ ++ KA F ++ D VI
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
Y +++ GY + + A+N+ +EM++ + +V + ++ + + + A + +
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHID 297
+I + K G LQ A +F +M+ + D+V++ +++ G+ G ID
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
A ++ + + + ++ L+ AL G L+ V + + NS+I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 358 TTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHM--KLGN 411
Y + G + ++M S+N ++ + N ++ L M + G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 412 IKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
+ PD T+ SIL ++E + R MI E + P Y C+I+ LTEA
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 472 YNLVKSM 478
+ + M
Sbjct: 712 FRIHDEM 718
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 10/254 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M ++ L+P+ TL L+ KLG+LQ + + + D + TLLD + K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL-DVVTYNTLLDGFGKVG 529
Query: 61 GVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A ++ M + T S++ L+ A G EAF ++ +MI + + P ++
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV-DLYSKFDVTKARKMFERLRNK 177
+ I G+S MI G PD ++ L+ + +++KA + +++ +
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 178 ------DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
D YN ++ G+ + + EA V +MI+ V+P+ + + +I+ ++
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Query: 232 LARSIHGYVLRHQY 245
A IH +L+ +
Sbjct: 710 EAFRIHDEMLQRGF 723
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 10/227 (4%)
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
G+ EA+ + L+ + +D + L+ L + + L A + VH ++
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTERCLTSWNA-----MLGAYAMHGNYAEVLKLFNHM 407
N++I Y+ C ++ A +F++M E WN+ M+ + +G E + LF
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPE-----WNSGTLCVMMRCFVNNGYGEEAIDLFTRF 211
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 467
K KP+ F + + C+ +G V+EG F++M REY IVP HY+ + +L+ +G
Sbjct: 212 KEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGH 271
Query: 468 LTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 514
L EA N V+ MP S TL++ R++GD E+G+ A+ + KL+
Sbjct: 272 LDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 230/546 (42%), Gaps = 66/546 (12%)
Query: 12 TLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGG---VKMAAAV 68
T +L+ K G L + + ++ G + F T M H CG + A ++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNT----MIHTCGTHGHLSEAESL 362
Query: 69 FGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT---------- 116
KM S ++N L++ + G A E +R++ + PD +T
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQ 422
Query: 117 ---LANAILSCAELD-----------------YLCHGKSIHGYMIRMGVEPDMVACT--- 153
+A AE+D Y+ G + + + D V +
Sbjct: 423 RKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL 482
Query: 154 -ALVDLYSKFDV-TKARKMFERLRN-----KDAVIYNVMMTGYLKNDLPVEAINVFHEMI 206
A++D+Y++ + +A +F RN D + YNVM+ Y K L +A+++F M
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 207 KMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQ 266
P+ + +L ++ + + A+ I +L + +I +Y + G L
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 267 YARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLL 322
A ++ M + V + S+I G+ G ++EAI FR+++ ++ + + L SL+
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 323 QALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER--C 380
+A S++GCL + V+ + G +++ +NS+++ A G ++ A +F + E+ C
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Query: 381 -LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
+ S+ M+ Y G E +++ M+ + D +F ++ + G + E ++F
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 440 RSMIREYTIVPGEVHYNCIIDLLSRAG-------QLTEAYNLVKSMPSTHSSAALCTLLS 492
M+ E ++ + + LL + G QL AYN K + + A TL S
Sbjct: 783 HEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLA---TPAITATLFS 839
Query: 493 ACRLYG 498
A LY
Sbjct: 840 AMGLYA 845
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 201/487 (41%), Gaps = 53/487 (10%)
Query: 26 LQEGRAIHGYAIRRGFGVCDEIFETTL---LDMYHKCG-GVKMAAAVFGK--MNATSTTV 79
+ EG + A+ F + + TTL +D+Y + G V+ +GK M+ V
Sbjct: 456 VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDV 515
Query: 80 GSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY 139
+N +I AY +A LF+ M ++ PD T + A +D + + I
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 140 MIRMGVEPDMVACTALVDLYSKFDV-TKARKMFERLRN----KDAVIYNVMMTGYLKNDL 194
M+ G +P A++ Y + + + A ++E + + V+Y ++ G+ ++ +
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 195 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQ 254
EAI F M + V N + +LI A S + + AR ++ + + V +N
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 255 IIHTYAKCGYLQYARLVFNRMRSR---DLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
++ A G + A +FN +R + D++S+ +M+ Y G +DEAI + ++ L
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Query: 312 RIDSVTLISLLQALSQLGCLSAVKEVH---------CLTYRAFH---------GKELSVN 353
D + ++ + G LS E+ L + F G
Sbjct: 756 LSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAV 815
Query: 354 NSLITTYAKCGKLN---MARYLFQQMT------ERC--LTS---------WNAMLGAYAM 393
+ L T Y + L + LF M E C LTS +NA++ Y+
Sbjct: 816 SQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSA 875
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 453
G+ LK + M+ ++PD +T ++ +G+V EG++ S + + P +
Sbjct: 876 SGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMV-EGVKRVHSRLTFGELEPSQS 934
Query: 454 HYNCIID 460
+ + D
Sbjct: 935 LFKAVRD 941
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 29/252 (11%)
Query: 255 IIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFR--LLQR 308
++ Y K G ++ A L M R D V+ +++ + + G D A F+ +
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 309 ENLRIDSV----------TLISLLQALS----QLGCLSAV-KEVHCLTYRAFHGKE---L 350
+L +DS+ + ++L Q LS ++G + + K +H + ++
Sbjct: 246 VDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLT 305
Query: 351 SVNNSLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNH 406
S N+LI Y K G+LN A LF +M + + ++N M+ HG+ +E L
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M+ I PD T+ +L+ + +G +E L+ +R IR+ + P V + ++ +L +
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK-IRKVGLFPDTVTHRAVLHILCQRK 424
Query: 467 QLTEAYNLVKSM 478
+ E ++ M
Sbjct: 425 MVAEVEAVIAEM 436
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/557 (21%), Positives = 244/557 (43%), Gaps = 26/557 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M R P+ LL A AK+ ++ G ++R G+ ++ L++ + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL-GEKMQR-LGISHNLYTYNILINCFCRR 58
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ +A A+ GKM ++ + + L+ Y H + +A L QM+ PD +T
Sbjct: 59 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLR- 175
I + ++ M++ G +P++V +V+ L + D+ A + ++
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 176 ---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D VI+N ++ K +A+N+F EM + PNV + +LIS +
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 288
A + ++ + + N +I + K G A + + M R D+ ++ S+I
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHG 347
G+ H +D+A +F + ++ D T +L++ + + E+ +++R G
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKL 403
++ +LI G + A+ +F+QM + +++ +L +G + L++
Sbjct: 359 DTVTYT-TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F++M+ IK D +T+++ +G V++G +F S+ + + P V YN +I L
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLC 476
Query: 464 RAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPRNSSS 520
L EAY L+K M S TL+ A GD + +++ +S
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536
Query: 521 YV-LISNILAEGGRWDE 536
+ L++N+L + GR D+
Sbjct: 537 TIGLVANMLHD-GRLDK 552
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 138/312 (44%), Gaps = 13/312 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M ++++ PN VT +L+ A K G E +H I+R + +IF +L++ +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--SIDPDIFTYNSLINGFCMH 303
Query: 60 GGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ A +F M + + ++N LI + + + + ELFR+M HR ++ D +T
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
I + + + M+ GV PD++ + L+D L + + KA ++F+ ++
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 177 K----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D IY M+ G K + ++F + V PNV + +IS + R ++
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV---SWTSMITG 289
A ++ + + N +I + + G + + MRS V S ++
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Query: 290 YVHHGHIDEAII 301
+H G +D++ +
Sbjct: 544 MLHDGRLDKSFL 555
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/423 (19%), Positives = 170/423 (40%), Gaps = 74/423 (17%)
Query: 138 GYMIRMGVEPDMVACTALVDLYSKFD-----VTKARKMFERLRNKDAVIYNVMMTGYLKN 192
G M+++G EP +V ++L++ Y V +M E D + + ++ G +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
+ EA+ + M++ PN+ + +++ + DI LA ++ L ++E
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL----LNKMEAAKIEA- 183
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLR 312
D+V + ++I + H+D+A+ LF+ ++ + +R
Sbjct: 184 --------------------------DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 313 IDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL 372
+ VT SL+ L G S ++ E +N +L+T
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMI------EKKINPNLVT-------------- 257
Query: 373 FQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA-CSHSGL 431
+NA++ A+ G + E KL + M +I PD T+ S++ C H L
Sbjct: 258 -----------FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALC 488
++ Q+F M+ + P YN +I ++ ++ + L + M +
Sbjct: 307 -DKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 489 TLLSACRLYGDTEIGEAIAKQILKLE-PRNSSSYVLISNILAEGGRWDEVAHIRAMTKDK 547
TL+ GD + + + KQ++ P + +Y ++ + L G+ ++ + +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 548 ELK 550
E+K
Sbjct: 425 EIK 427
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/543 (22%), Positives = 232/543 (42%), Gaps = 72/543 (13%)
Query: 52 LLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRK 109
L+ +Y + G ++ + +F M + +V + N ++ + + +G+ + + ++M+ RK
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228
Query: 110 VLPDLLTLANAILS--CAE-----LDYLCHGKSIHGY----------------------- 139
+ PD+ T N +++ CAE YL GY
Sbjct: 229 ICPDVATF-NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287
Query: 140 ------MIRMGVEPDMVACTALV-DLYSKFDVTKA----RKMFERLRNKDAVIYNVMMTG 188
M GV+ D+ L+ DL + K R M +R+ + + V YN ++ G
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
+ + A + +EM+ +SPN F LI + + A + Y++ + +T
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMMEAKGLTP 406
Query: 249 VEIA-NQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILF 303
E++ ++ K AR + RM+ + +++T MI G +G +DEA++L
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 304 RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
+ ++ + D VT +L+ ++G KE+ C YR + ++LI +
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 364 GKLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
G L A +++ M R ++N ++ + G AE + M I P+ ++F
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 420 TSILTACSHSGLVEEGLQIFRSMIREYTIV---PGEVHYNCIIDLLSRAGQLTEAYNLVK 476
++ +SG EGL+ F S+ E T V P Y ++ L + G L EA +K
Sbjct: 587 DCLINGYGNSG---EGLKAF-SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 477 SM---PSTHSSAALCTLLSACRLYGD-----TEIGEAIAKQILKLEPRNSSSYVLISNIL 528
S+ P+ + TLL+A G+ + GE + + IL P + + LIS +
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL---PDSYTYTSLISGLC 699
Query: 529 AEG 531
+G
Sbjct: 700 RKG 702
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 200/496 (40%), Gaps = 18/496 (3%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + L P+ V+ LL K R + R G V I T ++D K G
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV-GRITYTGMIDGLCKNG 457
Query: 61 GVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A + +M + + +++ LI + G+ A E+ ++ + P+ + +
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 178
I +C + L I+ MI G D LV K + F R D
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 179 AVI-----YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
++ ++ ++ GY + ++A +VF EM K+ P + +L+ + +R A
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITG 289
+ + N ++ K G L A +F M R D ++TS+I+G
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 290 YVHHGHIDEAIILFRLLQ-RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
G AI+ + + R N+ + V + + + G A H
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKLF 404
++ N++I Y++ GK+ L +M + LT++N +L Y+ + + L+
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 405 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 464
+ L I PD+LT S++ S ++E GL+I ++ I V +N +I
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD-RYTFNMLISKCCA 876
Query: 465 AGQLTEAYNLVKSMPS 480
G++ A++LVK M S
Sbjct: 877 NGEINWAFDLVKVMTS 892
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 182/465 (39%), Gaps = 64/465 (13%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG-- 138
++N LI + + G+ L A +L +M+ + P+ +T NA++ ++ G
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF-NALID----GHISEGNFKEALK 394
Query: 139 --YMIRM-GVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVI----YNVMMTG 188
YM+ G+ P V+ L+D K FD+ AR + R++ + Y M+ G
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL--ARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
KN EA+ + +EM K + P++ + LI+ + + A+ I + R
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHGHIDEAIILFR 304
I + +I+ + G L+ A ++ M +RD ++ ++T G + EA R
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 305 LLQRENLRIDSVTLISLLQALSQLG-CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKC 363
+ + + ++V+ L+ G L A +T + H SL+ K
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT-KVGHHPTFFTYGSLLKGLCKG 631
Query: 364 GKLNMARYLFQQM----TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTF 419
G L A + + +N +L A GN A+ + LF M +I PD T+
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 420 TSILTA-------------------------------CSHSGLVEEGLQ----IFRSMIR 444
TS+++ C G+ + G FR +
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
P V N +ID SR G++ + +L+ M + + L T
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 146/345 (42%), Gaps = 18/345 (5%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETT-LLDMYHKCGGVKMAA 66
PN+V + K G + G I+ G +I T ++D Y + G ++
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAG--IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 67 AVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC 124
+ +M + + ++N L+ Y +F L+R +I +LPD LT + +L
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 125 AELDYLCHGKSIHGYMIRMGVEPD-------MVACTALVDLYSKFDVTKARKMFERLRNK 177
E + L G I I GVE D + C A ++ FD+ K +K
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
D + M++ +N E+ V HEM K +SP ++ LI+ + + DI+ A +
Sbjct: 900 DTC--DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK 957
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH----H 293
++ H+ + ++ AKCG A L+ M LV + T +H +
Sbjct: 958 EEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVH 338
G++ EA+ L ++ L++D V+ L+ L G ++ E++
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 139/315 (44%), Gaps = 11/315 (3%)
Query: 173 RLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
RL N + +Y++++ YL+ + +++ +F M +P+V ++ +V +
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMIT 288
S +L+ + V N +I+ G + + + +M + +V++ +++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHG 347
Y G AI L ++ + + D T L+ L + ++ + + R H
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKL 403
E++ N+LI ++ GK+ +A L +M L+ ++NA++ + GN+ E LK+
Sbjct: 337 NEVTY-NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F M+ + P E+++ +L + + + M R V G + Y +ID L
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV-GRITYTGMIDGLC 454
Query: 464 RAGQLTEAYNLVKSM 478
+ G L EA L+ M
Sbjct: 455 KNGFLDEAVVLLNEM 469
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 200/477 (41%), Gaps = 63/477 (13%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRA-IHGYAIRRGFGVCDEIFETTLLDMYHKC 59
M+ + L P+R T +L+ + K G + + R G D + + L+++ +
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSG--DLVLYSNLIELSRRL 238
Query: 60 GGVKMAAAVFGKMNATSTTVG--SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
A ++F ++ + T ++N +I Y EA L ++M VLP+ ++
Sbjct: 239 CDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTK-ARKMFERLRN 176
+ + E S+ M + D+ C ++D+Y + D+ K A ++F LR
Sbjct: 299 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 177 KD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D V YN ++ Y + +L EAI++F M + + NV + +I
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK---------- 408
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMIT 288
I+G + H+ T + M+SR + ++++++I+
Sbjct: 409 ---IYGKTMEHEKATNL----------------------VQEMQSRGIEPNAITYSTIIS 443
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGK 348
+ G +D A LF+ L+ + ID V +++ A ++G + K R H
Sbjct: 444 IWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK-------RLLHEL 496
Query: 349 ELSVN---NSLITTYAKCGKLNMARYLFQQMTE----RCLTSWNAMLGAYAMHGNYAEVL 401
+L N + IT AK G+ A ++F+Q E + ++ + M+ Y+ + Y V+
Sbjct: 497 KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVI 556
Query: 402 KLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCI 458
++F M+ PD +L A E+ ++R M E + P EVH+ +
Sbjct: 557 EVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 176/399 (44%), Gaps = 29/399 (7%)
Query: 161 KFDVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
+FD+ A +F+ +R + D Y+ ++T + K + A++ +M + VS ++ L
Sbjct: 170 QFDI--AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL 227
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
+ NLI L D A SI + R + N +I+ Y K + ARL+ M
Sbjct: 228 YSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMN 287
Query: 277 S----RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 332
+ VS++++++ YV + EA+ +F ++ N +D T ++ QL
Sbjct: 288 EAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM-- 345
Query: 333 AVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMT----ERCLTSW 384
VKE L + + ++ N N+++ Y + A +LF+ M E+ + ++
Sbjct: 346 -VKEADRLFW-SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
N M+ Y + + L M+ I+P+ +T+++I++ +G ++ +F+ + R
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL-R 462
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS--MPSTHSSAALCTLLSACRLYGDTEI 502
+ +V Y +I R G + A L+ +P T+L+ G TE
Sbjct: 463 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKA---GRTEE 519
Query: 503 GEAIAKQILKL-EPRNSSSYVLISNILAEGGRWDEVAHI 540
+ +Q + E ++ S + + N+ + R+ V +
Sbjct: 520 ATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 119/557 (21%), Positives = 240/557 (43%), Gaps = 69/557 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M R +P+ V LL A AK+ I + G+ ++ + ++ + +
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTYSIFINYFCRR 123
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ +A A+ GKM ++ + N L+ + H + EA L QM+ PD +T
Sbjct: 124 SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
+ + + ++ M+ G +PD+V A+++ L + + A + ++
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 177 ----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
D VIYN ++ G K +A ++F++M + P+V + LIS + +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSR----DLVSWTSMI 287
A + +L + N +I + K G L A +++ M +S+ D+V++ ++I
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 288 TGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG 347
G+ + ++E + +FR + + L ++VT +L+ F
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF-------------------FQA 404
Query: 348 KELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAMHGNYAEVLKL 403
++ + A+ +F+QM + ++N +L +GN L +
Sbjct: 405 RDC----------------DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 404 FNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLS 463
F +M+ ++K D +T+T+++ A +G VE+G +F S+ + + P V Y ++
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFC 507
Query: 464 RAGQLTEAYNLVKSMPST---HSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR---- 516
R G EA L M +S TL+ A GD EA + +++K E R
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD----EAASAELIK-EMRSCGF 562
Query: 517 --NSSSYVLISNILAEG 531
++S++ L++N+L +G
Sbjct: 563 AGDASTFGLVTNMLHDG 579
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 23/331 (6%)
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYITRVEIA 252
+AI +F +M+K P++ F L+SA++ + I L + + H T
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY---- 113
Query: 253 NQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQR 308
+ I+ + + L A + +M +V+ S++ G+ H I EA+ L +
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 309 ENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
+ D+VT +L+ L Q S AV V + + +L ++I K G+ +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ-PDLVTYGAVINGLCKRGEPD 232
Query: 368 MARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
+A L +M E + +N ++ + + + LFN M+ IKPD T+ ++
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL----VKSMP 479
+ + G + ++ M+ E I P V +N +ID + G+L EA L VKS
Sbjct: 293 SCLCNYGRWSDASRLLSDML-EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQI 510
A TL+ Y E G + +++
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 192/454 (42%), Gaps = 65/454 (14%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPD--------------------------- 113
S+ ++ LHN Q +A +LF +M+H + LP
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 114 -------LLTLANAILSCAEL-DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-V 164
LL N ++ C L C G M+++G EPD+V T+L++ Y ++ +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 165 TKARKMFERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
A +F+++ + V Y ++ KN A+ +F++M PNV + L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVE----IANQIIHTYAKCGYLQYARLVFNRMR 276
++ + ++ A ++LR R+E +I + K G L A+ ++N M
Sbjct: 230 VTGLCEIGRWGDA----AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 277 S----RDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLS 332
D+ ++ S+I G +G +DEA +F L++R + V +L+ C S
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF----CKS 341
Query: 333 AVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER----CLTSW 384
E + K + N LI Y G+ ++A+ +F QM+ R + ++
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
N +L +G + L +F +M+ + + +T+T I+ G VE+ +F S+
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ + P + Y +I R G + EA +L K M
Sbjct: 462 K-GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 79 VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG 138
V ++ LI A++ G+ +EA EL+ MI V PD+ T + I L + +
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 139 YMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK----DAVIYNVMMTGYLKND 193
M R G P+ V T L+ + K V K+F + K + + Y V++ GY
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 194 LPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN 253
P A VF++M P++ + L+ + + A I Y+ + + +
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 254 QIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRE 309
II K G ++ A +F + S+ +++++T+MI+G+ G I EA LF+ ++ +
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 310 NL 311
Sbjct: 498 GF 499
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 51/263 (19%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGF------------GVC---- 44
M +R+ PN +T +L+ A K+G L E + ++ I+ G+C
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 45 ------------------DEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTTVG--SWNP 84
+E+ TTL+ + K V+ +F +M+ ++
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 85 LIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS-----IHGY 139
LI Y G+ A E+F QM R+ PD+ T N +L C+GK I Y
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY-NVLLD----GLCCNGKVEKALMIFEY 423
Query: 140 MIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK----DAVIYNVMMTGYLKNDL 194
M + ++ ++V T ++ K V A +F L +K + + Y M++G+ + L
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 195 PVEAINVFHEMIKMSVSPNVALF 217
EA ++F +M + PN +++
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 132/601 (21%), Positives = 248/601 (41%), Gaps = 69/601 (11%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M+DQ + PN T +L+ ++ L + A+ + GV + +D Y K
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDD--ALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
G A F KM + + + N + + G+ EA ++F + ++PD +T
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 118 ANAILSC-AELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLR 175
N ++ C +++ + + M+ G EPD++ +L++ LY V +A KMF R++
Sbjct: 507 -NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 176 ----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIR 231
V YN ++ G KN EAI +F M++ PN F L + ++
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 232 LARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS---RDLVSWTSMIT 288
LA + ++ + V N II K G ++ A F++M+ D V+ +++
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP 685
Query: 289 GYVHHGHIDEAI-ILFRLL-----QRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
G V I++A I+ L Q NL + + + L++ G +AV L
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDL----IGSILAEAGIDNAVSFSERLVA 741
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER----------------------- 379
S+ +I K ++ AR LF++ T+
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 380 --------------CL---TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSI 422
C+ ++N +L AY G E+ +L+ M + + +T +
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM---P 479
++ +G V++ L ++ ++ + P Y +ID LS++G+L EA L + M
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 480 STHSSAALCTLLSACRLYGDTEIGEAIAKQILKLEPR-NSSSYVLISNILAEGGRWDEVA 538
+ A L++ G+ + A+ K+++K R + +Y ++ + L GR DE
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 539 H 539
H
Sbjct: 982 H 982
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 210/498 (42%), Gaps = 37/498 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M++ +L P VT +LL K G +QE + +++G + I TL D K
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP-NTITFNTLFDCLCKND 622
Query: 61 GVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
V +A + KM V ++N +I + NGQ EA F QM + V PD +TL
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLC 681
Query: 119 NAILSCAELDYLCHG-KSIHGYMIRMGVEPDMVACTALV-DLYSKFDVTKARKMFERL-- 174
+ + + K I ++ +P + L+ + ++ + A ERL
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 175 ----RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIK-MSVSPNVALFLNLISAVSDLRD 229
R+ D+++ ++ N++ A +F + K + V P + + LI + +
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVS-GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM 800
Query: 230 IRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTS 285
I +A+ + V I V N ++ Y K G + ++ M + + ++
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 286 MITGYVHHGHIDEAIILF-RLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 344
+I+G V G++D+A+ L+ L+ + + T L+ LS+ G L K++
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL------- 913
Query: 345 FHG-------KELSVNNSLITTYAKCGKLNMARYLFQQMTERC----LTSWNAMLGAYAM 393
F G ++ N LI + K G+ + A LF++M + L +++ ++ M
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 394 HGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 453
G E L F +K + PD + + I+ S +EE L +F M I P
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 454 HYNCIIDLLSRAGQLTEA 471
YN +I L AG + EA
Sbjct: 1034 TYNSLILNLGIAGMVEEA 1051
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 192/482 (39%), Gaps = 53/482 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M D+ P+ VT L+ A L + + ++ G D + TLLD +
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF-EKMKTGRHKPDRVTYITLLDRFSDNR 342
Query: 61 GVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ + +M V ++ L+ A G EAF+ M + +LP+L T
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLRNK 177
I + L + G M +GV+P +D Y K D A + FE+++ K
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 178 ----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+ V N + K EA +F+ + + + P+ + ++ S + +I A
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITG 289
+ ++ + V + N +I+T K + A +F RM+ L V++ +++ G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
+G I EAI LF + + Q GC + +T+
Sbjct: 583 LGKNGKIQEAIELF-------------------EGMVQKGC-----PPNTITF------- 611
Query: 350 LSVNNSLITTYAKCGKLNMA-RYLFQQMTERCLT---SWNAMLGAYAMHGNYAEVLKLFN 405
N+L K ++ +A + LF+ M C+ ++N ++ +G E + F+
Sbjct: 612 ----NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 406 HMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCII-DLLSR 464
MK + PD +T ++L + L+E+ +I + + P + + +I +L+
Sbjct: 668 QMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 465 AG 466
AG
Sbjct: 727 AG 728
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 139/357 (38%), Gaps = 50/357 (14%)
Query: 168 RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL 227
RKM E +A YN ++ LK+ EA+ V+ MI P++ + +L+ +
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 228 RDIRLARSIHGYVLRHQYI---TRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DL 280
RDI S+ G + + + V I + G + A + RM D+
Sbjct: 237 RDID---SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE---- 336
V++T +I +D A +F ++ + D VT I+LL S L +VK+
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 337 ----------------VHCLTYRAFHGK---------------ELSVNNSLITTYAKCGK 365
V L G+ L N+LI + +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 366 LNMARYLFQQM----TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
L+ A LF M + ++ + Y G+ L+ F MK I P+ + +
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 422 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
L + + +G E QIF + ++ +VP V YN ++ S+ G++ EA L+ M
Sbjct: 474 SLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/550 (21%), Positives = 221/550 (40%), Gaps = 67/550 (12%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M R +P+ V LL A AK+ I + G+ ++ + L++ + +
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFD--LVISLGEQMQNLGISHNLYTYSILINCFCRR 129
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ +A AV KM + + N L+ + H + +A L QM+ PD T
Sbjct: 130 SQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
I + ++ M+ G +PD+V +V+ L + D+ A + +++
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 177 ----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
VIYN ++ +A+N+F EM + PNV + +LI + +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 288
A + ++ + V + +I + K G L A +++ M R D+ +++S+I
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQA----------------LSQLGCLS 332
G+ H +DEA +F L+ ++ + VT +L++ +SQ G +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 333 AVKEVHCLTYRAFHGKELS---------VNNSL---ITTYA-------KCGKLNMA---- 369
L + F +E V++ + I TY+ GK+ A
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 370 RYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
YL + E + ++N M+ G + LF + L +KP+ +T+T++++
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 430 GLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCT 489
GL EE +FR M +E +P YN +I R G + L++ M S
Sbjct: 550 GLKEEADALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS--------- 599
Query: 490 LLSACRLYGD 499
CR GD
Sbjct: 600 ----CRFVGD 605
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 20/301 (6%)
Query: 192 NDLPVE-AINVFHEMIKMSVSPNVALFLNLISAVSDLRD----IRLARSIHGYVLRHQYI 246
NDL ++ A+N+F +M+K P++ F L+SA++ + I L + + H
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 247 TRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIIL 302
T + +I+ + + L A V +M D+V+ S++ G+ H I +A+ L
Sbjct: 118 T----YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 303 FRLLQRENLRIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYA 361
+ + DS T +L+ L + S AV V + + +L ++
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ-PDLVTYGIVVNGLC 232
Query: 362 KCGKLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
K G +++A L ++M E + +N ++ A + N + L LF M I+P+ +
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
T+ S++ + G + ++ MI E I P V ++ +ID + G+L EA L
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 478 M 478
M
Sbjct: 352 M 352
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 223/533 (41%), Gaps = 42/533 (7%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ VT +LLH + E A+ GY + GF A A
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGF---------------------LEAVA 212
Query: 68 VFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M T V ++N LI G+ LEA L +M+ + + D++T +
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK----DAV 180
++ ++ M ++PD+V +A++D L + A+ +F + K +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
YN M+ G+ +A + +MI+ ++P+V F LISA + A + +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
L N +I+ + K A+ +F+ M S D+V++ ++I Y +DE +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--KELSVNNSLIT 358
L R + R L ++ T +L+ ++ L+A +++ HG + N L+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL--FQEMISHGVCPDTITCNILLY 510
Query: 359 TYAKCGKLNMARYLFQ--QMTERCL--TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
+ + KL A LF+ QM++ L ++N ++ E LF + + ++P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D T+ +++ + + +F M ++ P YN +I +AG++ ++ L
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 475 VKSMPSTHSSAALCTLLSA----CRLYGDTEIGEAIAKQILKLEPRNSSSYVL 523
+ M S S T+ A CR+ D EI E + + E + YV+
Sbjct: 630 ISEMRSNGFSGDAFTIKMAEEIICRV-SDEEIIENYLRPKINGETSSIPRYVV 681
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 213/474 (44%), Gaps = 48/474 (10%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC-AELDYLCHGKSIHGYMI 141
N +I ++ + A L+R+M R++ ++ + N ++ C + L S G +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF-NILIKCFCDCHKLSFSLSTFGKLT 168
Query: 142 RMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINV 201
++G +PD+V L+ + +R+ A+ ++ TG+L EA+ +
Sbjct: 169 KLGFQPDVVTFNTLL---------HGLCLEDRISEALALFGYMVETGFL------EAVAL 213
Query: 202 FHEMIKMSVSPNVALFLNLISAVS-DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYA 260
F +M+++ ++P V F LI+ + + R + A ++ V + +I V I++
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT-IVNGMC 272
Query: 261 KCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSV 316
K G + A + ++M D+V ++++I GH +A LF + + + +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 317 TLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQ 375
T ++ G S A + + + R + L+ N+LI+ K GKL A L +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF-NALISASVKEGKLFEAEKLCDE 391
Query: 376 MTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGL 431
M RC+ ++N+M+ + H + + +F+ M PD +TF +I+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 432 VEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL 491
V+EG+Q+ R + R +V YN +I L A +L + M S +C
Sbjct: 448 VDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM----ISHGVCPDT 502
Query: 492 SACR--LYG---DTEIGEAI----AKQILKLEPRNSSSYVLISNILAEGGRWDE 536
C LYG + ++ EA+ Q+ K++ ++ +Y +I + + +G + DE
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKID-LDTVAYNIIIHGMCKGSKVDE 555
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 213/492 (43%), Gaps = 29/492 (5%)
Query: 63 KMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
K+AA VF M T+ ++ ++ A+ + A L R M +P+ +
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-- 177
I S ++ + + + M MG PD ++ KFD + +A KM R+ +
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 178 --DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
D + Y +M G K A ++F+ + K P + +F LI + A++
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKA 374
Query: 236 I-HGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGY 290
+ V + + V N +I+ Y K G + A V + MR++ ++ S+T ++ G+
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 291 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL 350
G IDEA + + + L+ ++V L+ A + + E+ R ++
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 351 SVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNH 406
NSLI+ + ++ A +L + M + ++N ++ A+ G E KL N
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
M DE+T+ S++ +G V++ +F M+R+ P + N +I+ L R+G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNISCNILINGLCRSG 613
Query: 467 QLTEAYNLVKSMPSTHSSAALCTLLS----ACRLYGDTEIGEAIAKQILKLE--PRNSSS 520
+ EA K M S+ + T S CR G E G + ++ L+ E P ++ +
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA-GRIEDGLTMFRK-LQAEGIPPDTVT 671
Query: 521 YVLISNILAEGG 532
+ + + L +GG
Sbjct: 672 FNTLMSWLCKGG 683
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 167/423 (39%), Gaps = 52/423 (12%)
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
EA +L +M +PD T + IL + D + + M+ G PD + L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 157 DLYSKFD-VTKARKMFERLRNKDAVI---------------------------------- 181
+ K V A+ +F R+ + VI
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 182 --YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGY 239
YN ++ GY K L A+ V H+M PNV + L+ L I A ++
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 240 VLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGH 295
+ N +I + K + A +F M + D+ ++ S+I+G
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 296 IDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYR-AFHGKELS--V 352
I A+ L R + E + ++VT +L+ A + G +KE L F G L
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRG---EIKEARKLVNEMVFQGSPLDEIT 566
Query: 353 NNSLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
NSLI + G+++ AR LF++M S N ++ G E ++ M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQL 468
L PD +TF S++ +G +E+GL +FR + E I P V +N ++ L + G +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFV 685
Query: 469 TEA 471
+A
Sbjct: 686 YDA 688
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 180/439 (41%), Gaps = 52/439 (11%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ T ++ K + E + + RGF D+I L++ K G V A
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP-DDITYGYLMNGLCKIGRVDAAKD 343
Query: 68 VFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHR-KVLPDLLTLANAILSCAE 126
+F ++ + +N LI ++ +G+ +A + M+ ++PD+ T + I +
Sbjct: 344 LFYRIPKPEIVI--FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 127 LDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMFERLR----NKDAVI 181
+ + M G +P++ + T LVD + K + +A + + + V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
+N +++ + K EA+ +F EM + P+V F +LIS + ++ +I+ A + ++
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM----RSRDLVSWTSMITGYVHHGHID 297
+ N +I+ + + G ++ AR + N M D +++ S+I G G +D
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
+A LF + R+ A S + C N LI
Sbjct: 582 KARSLFEKMLRDG------------HAPSNISC-----------------------NILI 606
Query: 358 TTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
+ G + A ++M R T ++N+++ G + L +F ++ I
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 414 PDELTFTSILTACSHSGLV 432
PD +TF ++++ G V
Sbjct: 667 PDTVTFNTLMSWLCKGGFV 685
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 135/307 (43%), Gaps = 14/307 (4%)
Query: 182 YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVL 241
YNV++ + + A NVF++M+ + P + F ++ A + +I A S+ +
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 242 RHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHID 297
+H + I +IH+ +KC + A + M D ++ +I G I+
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
EA + + D +T L+ L ++G + A K+ L YR E+ + N+LI
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD---LFYR-IPKPEIVIFNTLI 360
Query: 358 TTYAKCGKLNMARYLFQQMTERC-----LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
+ G+L+ A+ + M + ++N+++ Y G L++ + M+
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAY 472
KP+ ++T ++ G ++E + M + + P V +NC+I + ++ EA
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 473 NLVKSMP 479
+ + MP
Sbjct: 480 EIFREMP 486
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 116/532 (21%), Positives = 233/532 (43%), Gaps = 56/532 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
+++++L ++ L+ + G +++ +H I G I +L++ Y K G
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC-NSLINGYCKSG 380
Query: 61 GVKMAAAVFGKMNATSTTVG--SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A +F +MN S ++N L+ Y G EA +L QM ++V+P ++T
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK 177
+ + + S+ M++ GV D ++C+ L++ L+ D +A K++E + +
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 178 ----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
D + NVM++G K + EA + + P V + L + +++ A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITG 289
++ Y+ R +E+ N +I K +L + +R+R L ++ ++ITG
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 290 YVHHGHIDEA-IILFRLLQR--------------ENLRIDSVTLISLL-QALSQLGCL-- 331
+ + G ID+A F ++++ R+D + LL Q + L
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLP 680
Query: 332 --SAVKE------VHCLTYRAFH-------GKELSVNNSLITTYA-----KCGKLNMARY 371
++KE CL + K+L V N+++ A K GKL AR
Sbjct: 681 GYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK 740
Query: 372 LFQQM--TERCLT---SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
LF + ++R + ++ ++ A+ G+ + L + M L I P+ +T+ +++
Sbjct: 741 LFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
G V+ ++ + ++ I P + YN +ID L ++G + EA L + M
Sbjct: 801 CKLGNVDRAQRLLHKLPQK-GITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/532 (21%), Positives = 225/532 (42%), Gaps = 52/532 (9%)
Query: 2 QDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAI---RRGFGVCDEI--------FET 50
+ Q+ P+ ++H ++ + Q+ ++ + GF V E+ F
Sbjct: 96 KQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSP 155
Query: 51 TLLDM----YHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQ 104
T+ DM Y + G VK A VF M ++ S N L++ + G+ A ++ Q
Sbjct: 156 TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 105 MIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMI-------RMGVEPDMVACTALVD 157
MI +V PD+ T + + + C ++ M+ +G+E ++V +L++
Sbjct: 216 MISFEVSPDVFTCSIVV------NAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLIN 269
Query: 158 LYSKFDVTKA-----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
Y+ + R M ER +++ V Y ++ GY K L EA +VF + + +
Sbjct: 270 GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
+ ++ L+ IR A +H ++ T I N +I+ Y K G L A +F
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 273 NRMRSRDLV----SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 328
+RM L ++ +++ GY G++DEA+ L + ++ + +T LL+ S++
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 329 GCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL----TS 383
G V + + R + E+S ++L+ K G N A L++ + R L +
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISC-STLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMI 443
N M+ E ++ +++ + KP T+ ++ G ++E + M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 444 REYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------PSTHSSAALCT 489
R+ I P YN +I + L + +LV + P+ + AL T
Sbjct: 569 RK-GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 619
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 189/467 (40%), Gaps = 67/467 (14%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC--DEIFETTLLDMYHK 58
MQ L+PN T+ ++ K L E A+ + VC DEI +L+D K
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE---EMDYKVCTPDEITFCSLIDGLGK 459
Query: 59 CGGVKMAAAVFGKMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLT 116
G V A V+ KM + S + LI + ++G+ + ++++ MI++ PDL
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL-Q 518
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRN 176
L N + C M + G EP+ K R MFE ++
Sbjct: 519 LLNTYMDC---------------MFKAG-EPE-----------------KGRAMFEEIKA 545
Query: 177 K----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
+ DA Y++++ G +K E +F+ M + + + +I +
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 288
A + + + V +I AK L A ++F +S+ ++V ++S+I
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ-------LGCLSAVKEVHCLT 341
G+ G IDEA ++ L ++ L + T SLL AL + L C ++KE+ C
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNY 397
+ +G LI K K N A +Q+M ++ + S+ M+ A GN
Sbjct: 726 NQVTYG-------ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNI 778
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
AE LF+ K PD + +++ S+ + +F R
Sbjct: 779 AEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 187/452 (41%), Gaps = 29/452 (6%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQALEAFELFRQMIH 107
TTL+ + K G V A ++ +M ++S + +N I ++ G+ A++ F ++
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 108 RKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYS---KFDV 164
+ PD +T + I + + L + ++ + P A ++ Y KFD
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD- 325
Query: 165 TKARKMFERLRNKDAV----IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNL 220
+A + ER R K ++ YN ++T K EA+ VF EM K +PN++ + L
Sbjct: 326 -EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNIL 383
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-- 278
I + + A + + + V N ++ K L A +F M +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 279 --DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
D +++ S+I G G +D+A ++ + + R +S+ SL++ G KE
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG----RKE 499
Query: 337 VHCLTYRAFHGKELSVNNSLITTYAKC----GKLNMARYLFQQMTERCLT----SWNAML 388
Y+ + S + L+ TY C G+ R +F+++ R S++ ++
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 389 GAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTI 448
G E +LF MK D + ++ G V + Q+ M +
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGF 618
Query: 449 VPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS 480
P V Y +ID L++ +L EAY L + S
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 140/389 (35%), Gaps = 74/389 (19%)
Query: 98 AFELFRQMIHRKVLPDLLTLANAIL----SCAELDYLCHGKSIHGYMIRMGVEPDMVACT 153
A E FR R LP N++L C D L I G M G P + C
Sbjct: 81 AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL---DQILGEMSVAGFGPSVNTCI 137
Query: 154 ALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 213
+V KA K+ E GY +V M K P
Sbjct: 138 EMV-----LGCVKANKLRE---------------GY----------DVVQMMRKFKFRPA 167
Query: 214 VALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFN 273
+ + LI A S + + ++ + Y V + +I +AK G + A + +
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 274 RMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLG 329
M+S D+V + I + G +D A F ++ L+ D VT S++ L +
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 330 CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLG 389
L E+ + L N + TYA +N M+
Sbjct: 288 RLDEAVEMF---------EHLEKNRRVPCTYA----------------------YNTMIM 316
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
Y G + E L + P + + ILT G V+E L++F M ++
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AA 374
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
P YN +ID+L RAG+L A+ L SM
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSM 403
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 208/501 (41%), Gaps = 54/501 (10%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M R P+ LL A AK+ ++ G ++R G+ ++ L++ + +
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL-GEKMQR-LGISHNLYTYNILINCFCRR 133
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ +A A+ GKM ++ + + L+ Y H + +A L QM+ PD +T
Sbjct: 134 SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLR- 175
I + ++ M++ G +P++V +V+ L + D+ A + ++
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 176 ---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
+ VIY+ ++ K +A+N+F EM V PNV + +LIS + +
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMIT 288
A + ++ + V N +I + K G L A +++ M R D+ +++S+I
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 289 GYVHHGHIDEAIILFRLLQRENLRIDSVTL----------------ISLLQALSQLGCLS 332
G+ H +DEA +F L+ ++ + VT + L + +SQ G +
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 333 AVKEVHCLTYRAFHGKE-------------------LSVNNSLITTYAKCGKLNMARYLF 373
L + F ++ + N+L+ K GKL A +F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 374 QQMT----ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHS 429
+ + E + ++N M+ G + LF + L +KPD + + ++++
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 430 GLVEEGLQIFRSMIREYTIVP 450
GL EE +FR M RE +P
Sbjct: 554 GLKEEADALFRKM-REDGPLP 573
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 9/251 (3%)
Query: 76 STTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKS 135
+ V ++N LI A++ G+ +EA +L+ +MI R + PD+ T ++ I D L K
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 136 IHGYMIRMGVEPDMVACTALVDLYSKFD-----VTKARKMFERLRNKDAVIYNVMMTGYL 190
+ MI P++V L++ + K V R+M +R + V Y ++ G+
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 191 KNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVE 250
+ A VF +M+ V PN+ + L+ + + A + Y+ R + +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 251 IANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLL 306
N +I K G ++ +F + + D++ + +MI+G+ G +EA LFR +
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 307 QRENLRIDSVT 317
+ + DS T
Sbjct: 567 REDGPLPDSGT 577
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 171/419 (40%), Gaps = 51/419 (12%)
Query: 74 ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHG 133
A S+ G + ++ LH+ + +A LF M+ + LP + + + A++
Sbjct: 45 AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 134 KSIHGYMIRMGVEPDMVACTALVDLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTG 188
S+ M R+G+ ++ L++ + S+ + A KM + V + ++ G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
Y +A+ + +M++M P+ F LI HG L ++
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLI---------------HGLFLHNKASEA 209
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQ- 307
V + ++++ R +LV++ ++ G G ID A L ++
Sbjct: 210 VALVDRMVQ----------------RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 308 ---RENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
N+ I S + SL + + L+ E+ R + +SLI+
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP----NVITYSSLISCLCNYE 309
Query: 365 KLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
+ + A L M ER + ++NA++ A+ G E KL++ M +I PD T++
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 421 SILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
S++ C H L +E +F MI + P V YN +I+ +A ++ E L + M
Sbjct: 370 SLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/516 (21%), Positives = 215/516 (41%), Gaps = 37/516 (7%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
P+ VT +LLH + E A+ GY + GF A A
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGF---------------------LEAVA 212
Query: 68 VFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M T V ++N LI G+ LEA L +M+ + + D++T +
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK----DAV 180
++ ++ M ++PD+V +A++D L + A+ +F + K +
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
YN M+ G+ +A + +MI+ ++P+V F LISA + A + +
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAI 300
L N +I+ + K A+ +F+ M S D+V++ ++I Y +DE +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 301 ILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHG--KELSVNNSLIT 358
L R + R L ++ T +L+ ++ L+A +++ HG + N L+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL--FQEMISHGVCPDTITCNILLY 510
Query: 359 TYAKCGKLNMARYLFQ--QMTERCL--TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKP 414
+ + KL A LF+ QM++ L ++N ++ E LF + + ++P
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D T+ +++ + + +F M ++ P YN +I +AG++ ++ L
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 475 VKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQI 510
+ M S S T+ L D + ++ + +
Sbjct: 630 ISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 665
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 214/479 (44%), Gaps = 48/479 (10%)
Query: 78 TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSC-AELDYLCHGKSI 136
T N +I ++ + A L+R+M R++ ++ + N ++ C + L S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF-NILIKCFCDCHKLSFSLST 163
Query: 137 HGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPV 196
G + ++G +PD+V L+ + +R+ A+ ++ TG+L
Sbjct: 164 FGKLTKLGFQPDVVTFNTLL---------HGLCLEDRISEALALFGYMVETGFL------ 208
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVS-DLRDIRLARSIHGYVLRHQYITRVEIANQI 255
EA+ +F +M+++ ++P V F LI+ + + R + A ++ V + +I V I
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT-I 267
Query: 256 IHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
++ K G + A + ++M D+V ++++I GH +A LF + + +
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 312 RIDSVTLISLLQALSQLGCLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+ T ++ G S A + + + R + L+ N+LI+ K GKL A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF-NALISASVKEGKLFEAE 386
Query: 371 YLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
L +M RC+ ++N+M+ + H + + +F+ M PD +TF +I+
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVY 442
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAA 486
+ V+EG+Q+ R + R +V YN +I L A +L + M S
Sbjct: 443 CRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI----SHG 497
Query: 487 LCTLLSACR--LYG---DTEIGEAI----AKQILKLEPRNSSSYVLISNILAEGGRWDE 536
+C C LYG + ++ EA+ Q+ K++ ++ +Y +I + + +G + DE
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID-LDTVAYNIIIHGMCKGSKVDE 555
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 105/202 (51%)
Query: 314 DSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLF 373
D + L ++ + L L K+VH ++ + +NN +I+ + +C + A+ +F
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 374 QQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVE 433
M ++ + SW+ M+ AY+ +G + L LF M +KP+E TF ++ AC+ G +E
Sbjct: 295 DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
Query: 434 EGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSA 493
E F SM E+ I P HY ++ +L + G L EA ++ +P ++ + +
Sbjct: 355 EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNY 414
Query: 494 CRLYGDTEIGEAIAKQILKLEP 515
RL+GD ++ + + + ++ ++P
Sbjct: 415 ARLHGDIDLEDYMEELMVDVDP 436
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 114/248 (45%), Gaps = 11/248 (4%)
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
E++ P+ F+ L + ++L+ + ++ +H + L+ ++ ++ N +I + +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 264 YLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQ 323
+ A+ VF+ M +D+ SW M+ Y +G D+A+ LF + + L+ + T +++
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 324 ALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL--ITTYAKCGKLNMA-RYLFQQMTERC 380
A + +G + +H + + HG + L + KCG L A +Y+ E
Sbjct: 346 ACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 381 LTSWNAMLGAYAMHGNYAEVLKLFNHMK--LGNIKPDELTFTSILTACSHSGLVEEGLQI 438
W AM +HG+ + L ++M+ + ++ P + I T S E +
Sbjct: 405 ADFWEAMRNYARLHGD----IDLEDYMEELMVDVDPSKAVINKIPTPPPKS-FKETNMVT 459
Query: 439 FRSMIREY 446
+S I E+
Sbjct: 460 SKSRILEF 467
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK-F 162
+++ + +PD SCA L L H K +H + ++ D ++ ++ +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 163 DVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLIS 222
+T A+++F+ + +KD +++MM Y N + +A+++F EM K + PN FL +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 223 AVSDLRDIRLARSIHGYVLRHQY--ITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
A + + I A +H +++++ + E ++ KCG+L A +
Sbjct: 346 ACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 281 VSWTSMITGYVH-HGHID 297
+ + Y HG ID
Sbjct: 405 ADFWEAMRNYARLHGDID 422
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 3 DQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGV 62
D+ P+R V L + A L SL+ + +H + ++ F D ++ M+ +C +
Sbjct: 229 DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF-RGDPKLNNMVISMFGECSSI 287
Query: 63 KMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAIL 122
A VF M + SW+ ++ AY NG +A LF +M + P+ T L
Sbjct: 288 TDAKRVFDHM--VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 123 SCA 125
+CA
Sbjct: 346 ACA 348
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 196/477 (41%), Gaps = 20/477 (4%)
Query: 17 LHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS 76
L + G L+EG + G V D I TTL+ + + G + AA + + +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHG-NVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 77 TT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGK 134
V ++N +I+ Y G+ A + +M V PD++T + S + L
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 135 SIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNK----DAVIYNVMMTGY 189
+ M++ PD++ T L++ + V A K+ + +R++ D V YNV++ G
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 249
K EAI ++M PNV ++ ++ A + +LR + V
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 250 EIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRL 305
N +I+ + G L A + +M + +S+ ++ G+ +D AI
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ D VT ++L AL + G + E+ L N++I AK GK
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 366 LNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
A L +M + L ++++++G + G E +K F+ + I+P+ +TF S
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 422 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
I+ S + + MI P E Y +I+ L+ G EA L+ +
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 354 NSLITTYAKCGKLNMARYLFQQMT-ERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
N +I+ Y K G++N A + +M+ + ++N +L + G + +++ + M +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 413 KPDELTFTSILTA-CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA 471
PD +T+T ++ A C SG V +++ M R+ P V YN +++ + + G+L EA
Sbjct: 236 YPDVITYTILIEATCRDSG-VGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 472 YNLVKSMPST 481
+ MPS+
Sbjct: 294 IKFLNDMPSS 303
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 294 GHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN 353
G + +A+ + + + E +D L + Q L K VH + ++S
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 354 NSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIK 413
NS+I Y+ CG + A +F M ER L +W ++ +A +G + + F+ K K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 414 PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYN 473
PD F I AC G + EGL F SM +EY I+P HY ++ +L+ G L EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 474 LVKSMPSTHSSAALCTLLSACRLYGDTEIGEAIAKQILKLE 514
V+SM + TL++ R++GD +G+ + +L+
Sbjct: 340 FVESMEP--NVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 226 DLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTS 285
D + ++ A+ +H ++ I+ + N II Y+ CG ++ A VFN M R+L +W
Sbjct: 193 DAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCG 252
Query: 286 MITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL--------SAVKE- 336
+I + +G ++AI F ++E + D + A LG + S KE
Sbjct: 253 VIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEY 312
Query: 337 --VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMH 394
+ C+ + SL+ A+ G L+ A + M E + W ++ +H
Sbjct: 313 GIIPCMEHYV----------SLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVH 361
Query: 395 GN 396
G+
Sbjct: 362 GD 363
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 25/370 (6%)
Query: 144 GVEPDMVACTALVDLYSKF-DVTKA----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
G P +V L++LY+K ++KA R M E + Y++M+ G++K A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVSDL----RDIRLARSIHGYVLRHQYITRVEIANQ 254
VF +M+K + P+V L+ N+ISA + R I+ + + LRH+ TR +
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK--LRHRPTTRTFMP-- 594
Query: 255 IIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITGYVHHGHIDEAIILFRLLQREN 310
IIH YAK G ++ + VF+ MR V ++ +I G V +++A+ + +
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+ + T ++Q + +G E ++ +L+ K G++ A
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 371 YLFQQMTERCLTS----WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
+ ++M+ R + +N ++ +A G+ E L MK +KPD T+TS ++AC
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEA---YNLVKSMPSTHS 483
S +G + Q M + P Y +I +RA +A Y +K+M
Sbjct: 775 SKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 484 SAALCTLLSA 493
A LL++
Sbjct: 834 KAVYHCLLTS 843
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 196/484 (40%), Gaps = 55/484 (11%)
Query: 52 LLDMYHKCGGVKMAAAVFGKMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRK 109
++ Y + G + A F +M A T S + LI AY EA R+M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 110 VLPDLLTL---------------ANAILSCAELDYLCHGKSIHGYMIRMGVEP-DMVACT 153
+ L+T A+ A+ + SI+G +I + +M
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 154 ALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPN 213
ALV R+M E + IY+ MM GY + + VF + + +P
Sbjct: 435 ALV-----------REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 214 VALF---LNLISAVSDL-RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYAR 269
V + +NL + V + + + ++R + ++H T + +I+ + K A
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT----YSMMINGFVKLKDWANAF 539
Query: 270 LVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQAL 325
VF M D++ + ++I+ + G++D AI + +Q+ R + T + ++
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 326 SQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT--- 382
++ G + EV + R + N LI + ++ A + +MT ++
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 383 -SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRS 441
++ ++ YA G+ + + F ++ + D T+ ++L AC SG ++ L + +
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 442 MIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------PSTHSSAALCTLLSACR 495
M I YN +ID +R G + EA +L++ M P H+ + +SAC
Sbjct: 720 M-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT---YTSFISACS 775
Query: 496 LYGD 499
GD
Sbjct: 776 KAGD 779
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 176/423 (41%), Gaps = 23/423 (5%)
Query: 144 GVEPDMVACTALVDLYS-KFDVTKA----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEA 198
G+ P T+L+ Y+ D+ +A RKM E V Y+V++ G+ K A
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAA 398
Query: 199 INVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHT 258
F E ++ + N +++ +I A ++ A ++ + + I + ++
Sbjct: 399 DYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDG 458
Query: 259 YAKCGYLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRID 314
Y + +VF R++ + +V++ +I Y G I +A+ + R+++ E ++ +
Sbjct: 459 YTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHN 518
Query: 315 SVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYL-- 372
T ++ +L + V + ++ + N++I+ + CG NM R +
Sbjct: 519 LKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF--CGMGNMDRAIQT 576
Query: 373 ---FQQMTERCLT-SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSH 428
Q++ R T ++ ++ YA G+ L++F+ M+ P TF ++
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 429 SGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALC 488
+E+ ++I M + E Y I+ + G +A+ + + +
Sbjct: 637 KRQMEKAVEILDEMTLA-GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 489 T---LLSACRLYGDTEIGEAIAKQILKLE-PRNSSSY-VLISNILAEGGRWDEVAHIRAM 543
T LL AC G + A+ K++ PRNS Y +LI G W+ I+ M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 544 TKD 546
K+
Sbjct: 756 KKE 758
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 35/219 (15%)
Query: 9 NRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGVKMAAA 67
N T ++ A +G G+A + + G+ +IF LL K G ++ A A
Sbjct: 658 NEHTYTKIMQGYASVGDT--GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALA 715
Query: 68 VFGKMNATSTTVGS--WNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
V +M+A + S +N LI + G EA +L +QM V PD+ T + I +C+
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVM 185
+ + M +GV+P++ Y +
Sbjct: 776 KAGDMNRATQTIEEMEALGVKPNIKT------------------------------YTTL 805
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 224
+ G+ + LP +A++ + EM M + P+ A++ L++++
Sbjct: 806 IKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 14/327 (4%)
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
IYN+M+ + +++ +A +F EM K S P+ + LI+A R A ++ +
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHI 296
LR N +I+ G + A V +M DLV+ +++ Y
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV--HCLTYRAFHGKELSVNN 354
+A+ F L++ +R D+ T ++ LS+LG S ++ RA ++
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
S++ Y+ G++ R +F+ M L S+NA++GAYA+HG L + +K
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
I PD +++T +L + S + ++F M+R+ P V YN +ID G L E
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 471 AYNLVKSMPS---THSSAALCTLLSAC 494
A + + M + ++CTLL+AC
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 220/515 (42%), Gaps = 72/515 (13%)
Query: 44 CDEIFET--TLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAF 99
C ET L++ + + G + A + M A + + ++N LI A +G EA
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 233
Query: 100 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVD 157
E+ ++M V PDL+T N +LS A + K++ + + G V PD ++
Sbjct: 234 EVCKKMTDNGVGPDLVT-HNIVLS-AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 158 LYSKF-DVTKARKMFERLRNK------DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 210
SK ++A +F +R K D V + +M Y VF M+ +
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
PN+ + L+ A + A S+ G + ++ I V ++++Y + A+
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 271 VFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
VF MR ++V++ ++I Y +G + EA+ +FR ++++ ++ + V++ +LL A
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-- 469
Query: 327 QLGCLSAVKEVHCLTY-RAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER-- 379
C + K+V+ T A + +++N NS I +Y +L A L+Q M ++
Sbjct: 470 ---CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 380 --------------CLTS-----------------------WNAMLGAYAMHGNYAEVLK 402
C S ++++L AY+ G E
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
+FN MK+ +PD + +TS+L A + S + ++F M I P + + ++
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM-EANGIEPDSIACSALMRAF 645
Query: 463 SRAGQLTEAY---NLVKSMPSTHSSAALCTLLSAC 494
++ GQ + + +L++ + A + SAC
Sbjct: 646 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 187/487 (38%), Gaps = 86/487 (17%)
Query: 37 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQ 94
I++ + ++I+ ++ ++ + V A +F +M S +++ LI A+ GQ
Sbjct: 135 IQKNYCARNDIY-NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQ 193
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 154
A L M+ + P T N I +C + M GV PD+V
Sbjct: 194 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT--- 250
Query: 155 LVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
+N++++ Y +A++ F M V P+
Sbjct: 251 ---------------------------HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN--QIIHTYAKCGYLQYARLVF 272
F +I +S L A + + + R ++ I+H Y+ G ++ R VF
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 273 NRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 328
M + ++VS+ +++ Y HG S T +S+L + Q
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGM-------------------SGTALSVLGDIKQN 384
Query: 329 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TER---CLTSW 384
G + V CL + +Y + + A+ +F M ER + ++
Sbjct: 385 GIIPDVVSYTCL----------------LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
NA++ AY +G AE +++F M+ IKP+ ++ ++L ACS S + + S +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK-KKVNVDTVLSAAQ 487
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL----SACRLYGDT 500
I YN I A +L +A L +SM A T +CR+ +
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM---S 544
Query: 501 EIGEAIA 507
+ EAI+
Sbjct: 545 KYPEAIS 551
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 181/404 (44%), Gaps = 21/404 (5%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYM 140
S PL+ A L ++ + ++++MI RK+ P++ T I + + + + + M
Sbjct: 190 SCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM 249
Query: 141 IRMGVEPDMVACTALVDLYSKF----DVTKA----RKMFERLRNKDAVIYNVMMTGYLKN 192
G P++V+ L+D Y K + KA ++M E + + +N+++ G+ K+
Sbjct: 250 KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKD 309
Query: 193 DLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA 252
D ++ VF EM+ V PNV + +LI+ + + I A S+ ++ +
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITY 369
Query: 253 NQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSM----ITGYVHHGHIDEAIILFRLLQR 308
N +I+ + K L+ A +F ++ + V T M I Y G ID+ L ++R
Sbjct: 370 NALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER 429
Query: 309 ENLRIDSVTLISLLQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
E + D T L+ L + G + A K++ LT + +L + L+ Y + G+
Sbjct: 430 EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESR 487
Query: 368 MARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHM-KLGNIKPDELTFTSI 422
A L ++M++ L ++N ++ Y GN + M K ++ + ++ +
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 423 LTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAG 466
L S G +E+ + M+ E +VP + Y + + + G
Sbjct: 548 LQGYSQKGKLEDANMLLNEML-EKGLVPNRITYEIVKEEMVDQG 590
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 171/391 (43%), Gaps = 48/391 (12%)
Query: 4 QRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKCGGV 62
+++ PN T +++A K G + + R + + +G + TL+D Y K GG
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDV--MEDMKVYGCSPNVVSYNTLIDGYCKLGGN 274
Query: 63 -KM--AAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
KM A AV +M N S + ++N LI + + + ++F++M+ + V P++++
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNK 177
+ I + S+ M+ GV+P+++
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT-------------------------- 368
Query: 178 DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIH 237
YN ++ G+ KND+ EA+++F + P ++ LI A L I ++
Sbjct: 369 ----YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 238 GYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR---DLVSWTSMITGYVHHG 294
+ R + V N +I + G ++ A+ +F+++ S+ DLV++ ++ GY G
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKG 484
Query: 295 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVN- 353
+A +L + + + L+ +T +++ + G L A + + + L +N
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE---RRLRMNV 541
Query: 354 ---NSLITTYAKCGKLNMARYLFQQMTERCL 381
N L+ Y++ GKL A L +M E+ L
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 151/382 (39%), Gaps = 53/382 (13%)
Query: 185 MMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQ 244
+M LK + + V+ EMI+ + PNV F +I+A+ + AR + + +
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 245 YITRVEIANQIIHTYAKCG---YLQYARLVFNRMRSRD----LVSWTSMITGYVHHGHID 297
V N +I Y K G + A V M D L ++ +I G+ ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 298 EAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI 357
++ +F+ + ++++ + ++ SL+ L G +S
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA----------------------- 350
Query: 358 TTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
++M + + L ++NA++ + + E L +F +K P
Sbjct: 351 --------ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
+ ++ A G +++G + M RE IVP YNC+I L R G + A L
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 478 MPSTHSSAALCTLLSA-------CRLYGDTEIGEAIAKQILK--LEPRNSSSYVLISNIL 528
+ +S L L++ CR G++ + K++ K L+PR+ + +++
Sbjct: 462 L----TSKGLPDLVTFHILMEGYCR-KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 529 AEGGRWDEVAHIRAMTKDKELK 550
EG M K++ L+
Sbjct: 517 KEGNLKAATNMRTQMEKERRLR 538
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 14/327 (4%)
Query: 181 IYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
IYN+M+ + +++ +A +F EM K S P+ + LI+A R A ++ +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHI 296
LR N +I+ G + A V +M DLV+ +++ Y
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV--HCLTYRAFHGKELSVNN 354
+A+ F L++ +R D+ T ++ LS+LG S ++ RA ++
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
S++ Y+ G++ R +F+ M L S+NA++GAYA+HG L + +K
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
I PD +++T +L + S + ++F M+R+ P V YN +ID G L E
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 471 AYNLVKSMPS---THSSAALCTLLSAC 494
A + + M + ++CTLL+AC
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 118/517 (22%), Positives = 221/517 (42%), Gaps = 76/517 (14%)
Query: 44 CDEIFET--TLLDMYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAF 99
C ET L++ + + G + A + M A + + ++N LI A +G EA
Sbjct: 42 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 101
Query: 100 ELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMG--VEPDMVACTALVD 157
E+ ++M V PDL+T N +LS A + K++ + + G V PD ++
Sbjct: 102 EVCKKMTDNGVGPDLVT-HNIVLS-AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 159
Query: 158 LYSKF-DVTKARKMFERLRNK------DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSV 210
SK ++A +F +R K D V + +M Y VF M+ +
Sbjct: 160 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 219
Query: 211 SPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARL 270
PN+ + L+ A + A S+ G + ++ I V ++++Y + A+
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 271 VFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
VF MR ++V++ ++I Y +G + EA+ +FR ++++ ++ + V++ +LL A
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-- 337
Query: 327 QLGCLSAVKEVHCLTY-RAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER-- 379
C + K+V+ T A + +++N NS I +Y +L A L+Q M ++
Sbjct: 338 ---CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 380 --------------CLTS-----------------------WNAMLGAYAMHGNYAEVLK 402
C S ++++L AY+ G E
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
+FN MK+ +PD + +TS+L A + S + ++F M I P + + ++
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM-EANGIEPDSIACSALMRAF 513
Query: 463 SRAGQLTEAYNLV-----KSMPSTHSSAALCTLLSAC 494
++ GQ + + L+ K +P T A + SAC
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFT--GAVFFEIFSAC 548
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 181/476 (38%), Gaps = 83/476 (17%)
Query: 37 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATS--TTVGSWNPLIAAYLHNGQ 94
I++ + ++I+ ++ ++ + V A +F +M S +++ LI A+ GQ
Sbjct: 3 IQKNYCARNDIY-NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQ 61
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTA 154
A L M+ + P T N I +C + M GV PD+V
Sbjct: 62 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVT--- 118
Query: 155 LVDLYSKFDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNV 214
+N++++ Y +A++ F M V P+
Sbjct: 119 ---------------------------HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 151
Query: 215 ALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIAN--QIIHTYAKCGYLQYARLVF 272
F +I +S L A + + + R ++ I+H Y+ G ++ R VF
Sbjct: 152 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 211
Query: 273 NRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 328
M + ++VS+ +++ Y HG S T +S+L + Q
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGM-------------------SGTALSVLGDIKQN 252
Query: 329 GCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TER---CLTSW 384
G + V CL + +Y + + A+ +F M ER + ++
Sbjct: 253 GIIPDVVSYTCL----------------LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 385 NAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIR 444
NA++ AY +G AE +++F M+ IKP+ ++ ++L ACS S + + S +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK-KKVNVDTVLSAAQ 355
Query: 445 EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLL----SACRL 496
I YN I A +L +A L +SM A T +CR+
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 166/358 (46%), Gaps = 25/358 (6%)
Query: 140 MIRMGVEPDMVACTALVDLYSK-----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDL 194
M +G PD+ A +DL + F V M +R R D V Y +++ G +
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 195 PVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA-N 253
+A+ +++ MI+ VSP+ L+ + R + LA + ++ + + N
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 254 QIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 309
+I + K G ++ A + + M DLV++ ++ Y + + A + + R
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 310 NLRIDSVTLISLLQALSQLG----CLS-AVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
+++D+ + LL+ ++ C + VKE + R F ++ ++LI T+ +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE---MEPRGFC--DVVSYSTLIETFCRAS 339
Query: 365 KLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFT 420
A LF++M ++ + ++ +++ A+ GN + KL + M + PD + +T
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 421 SILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+IL SG V++ +F MI E+ I P + YN +I L R+G++TEA L + M
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMI-EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 148/340 (43%), Gaps = 14/340 (4%)
Query: 98 AFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV- 156
A + F M+ R PD+++ I + I MIR GV PD AC ALV
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 157 DLYSKFDVTKARKMF-ERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 211
L V A +M E +++ V+YN +++G+ K +A + M K+
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 212 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYA-RL 270
P++ + L++ D ++ A + ++R NQ++ + + +
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 271 VFNRMRSR---DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
+ M R D+VS++++I + + +A LF ++++ + ++ VT SL++A +
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----S 383
G S K++ + +++ K G ++ A +F M E +T S
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
+N+++ G E +KLF MK PDELTF I+
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 192/462 (41%), Gaps = 76/462 (16%)
Query: 52 LLDMYHKCGGVKMAAAV-FGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKV 110
LLD+ K +AA V K+N +S T L +A G+ +AF + R+MI +
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFT----RCLCSA----GKYEKAFSVIREMIGQGF 479
Query: 111 LPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKM 170
+PD T + L+YLC+ SK ++ A +
Sbjct: 480 IPDTSTYSKV------LNYLCNA--------------------------SKMEL--AFLL 505
Query: 171 FERLRN----KDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
FE ++ D Y +M+ + K L +A F+EM ++ +PNV + LI A
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM-RSRD------ 279
+ + A + +L + + + +I + K G ++ A +F RM S+D
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 280 -------------LVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALS 326
+V++ +++ G+ ++EA L + E + + +L+ L
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 327 QLGCLSAVKEVHCLTYRAFHG--KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTS- 383
++G L +EV T + HG L +SLI Y K + ++A + +M E
Sbjct: 686 KVGKLDEAQEVK--TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 384 ---WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
+ M+ G E KL M+ +P+ +T+T+++ G +E L++
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTH 482
M + + P V Y +ID + G L A+NL++ M TH
Sbjct: 804 RMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 203/510 (39%), Gaps = 84/510 (16%)
Query: 37 IRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMNATSTT--VGSWNPLIAAYLHNGQ 94
++RG V D T ++D + K G ++ A F +M T V ++ LI AYL +
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 95 ALEAFELFRQMIHRKVLPDLLTLANAI----------LSCAELDYLCHGKSIHGYMIRMG 144
A ELF M+ LP+++T + I +C + +C K +
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV-------- 620
Query: 145 VEPDMVACTALVDLYSK-FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFH 203
PD VD+Y K +D R + V Y ++ G+ K+ EA +
Sbjct: 621 --PD-------VDMYFKQYDDNSER--------PNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 204 EMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCG 263
M PN ++ LI + + + A+ + + H + + + +I Y K
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 264 YLQYARLVFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
A V ++M + ++V +T MI G G DEA L ++++ + + + VT
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 320 SLLQALSQLG----CLSAVKEV-------HCLTYRAFHGKELSVNNSLITTYAKCGKLNM 368
+++ +G CL ++ + + +TYR LI K G L++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV-----------LIDHCCKNGALDV 832
Query: 369 ARYLFQQMTERCLTSWNAMLGAY-----AMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
A L ++M + T W Y + + E L L + + + P + ++
Sbjct: 833 AHNLLEEMKQ---THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLI 889
Query: 424 TACSHSGLVEEGLQIFRSMIR-EYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM---- 478
+ +E L++ + T+V YN +I+ L A ++ A+ L M
Sbjct: 890 DNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKG 949
Query: 479 --PSTHSSAALCTLLSACRLYGDTEIGEAI 506
P S C+L+ L+ +++I EA+
Sbjct: 950 VIPEMQS---FCSLIKG--LFRNSKISEAL 974
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/589 (20%), Positives = 224/589 (38%), Gaps = 83/589 (14%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIH---GYAIRRGFGVCDEIFETTLLDMYH 57
++D R P+R T L+ A K L IH A R G F +L
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC---- 281
Query: 58 KCGGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
K G + A + N TV + LI+ EA + +M LP+++T
Sbjct: 282 KVGKWREALTLVETENFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 340
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLY-SKFDVTKARKMFERLRN 176
+ + C L K + M+ G P +LV Y + D + A K+ +++
Sbjct: 341 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400
Query: 177 ----KDAVIYNVMM------TGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
V+YN+++ L DL A + EM+ V N + +
Sbjct: 401 CGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 460
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVS 282
A S+ ++ +I +++++ ++ A L+F M+ D+ +
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 283 WTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTY 342
+T M+ + G I++A F + ++GC V +TY
Sbjct: 521 YTIMVDSFCKAGLIEQARKWF-------------------NEMREVGCTPNV-----VTY 556
Query: 343 RAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM-TERCL---TSWNAMLGAYAMHGNYA 398
A LI Y K K++ A LF+ M +E CL +++A++ + G
Sbjct: 557 TA-----------LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 399 EVLKLFNHM----------------KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSM 442
+ ++F M + +P+ +T+ ++L S VEE ++ +M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 443 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLSACRLYGDTEI 502
E P ++ Y+ +ID L + G+L EA + M A L T S Y +
Sbjct: 666 SME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 503 GEAIAKQILKLEPRNSSSYVLISNILAEG----GRWDEVAHIRAMTKDK 547
+ +K + K+ + + V+I + +G G+ DE + M ++K
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 170/431 (39%), Gaps = 55/431 (12%)
Query: 83 NPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIR 142
N L+ + NG A E ++ + P T I + + D L IH M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 143 MGVEPD--MVACTALVDLYSKFDVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPV 196
+ D + C A YS V K R+ + + D V Y +++G + L
Sbjct: 264 ANLRMDGFTLRCFA----YSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFE 319
Query: 197 EAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQII 256
EA++ + M S PNV + L+ + + + + + ++ +I N ++
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 257 HTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLL-----QRENL 311
H Y G YA + +M V GH+ ++ L+ +++L
Sbjct: 380 HAYCTSGDHSYAYKLLKKM---------------VKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 312 RIDSVTLI-----SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLI--------T 358
D + L +L A L ++ CL + K SV +I +
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 359 TYAK-------CGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHM 407
TY+K K+ +A LF++M L ++ M+ ++ G + K FN M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 408 KLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQ 467
+ P+ +T+T+++ A + V ++F +M+ E +P V Y+ +ID +AGQ
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQ 603
Query: 468 LTEAYNLVKSM 478
+ +A + + M
Sbjct: 604 VEKACQIFERM 614
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 130/317 (41%), Gaps = 26/317 (8%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN++ +L+ K+G L E + + GF + ++L+D Y K +A+
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY-SSLIDRYFKVKRQDLASK 730
Query: 68 VFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
V KM N+ + V + +I G+ EA++L + M + P+++T I
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK---FDVTKARKMFERLRNKDAVIY 182
+ + + M GV P+ V L+D K DV A + E ++ +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV--AHNLLEEMKQTH---W 845
Query: 183 NVMMTGYLK-----NDLPVEAINVFHEMIKMSVSPNVALFL----NLISAVSDLRDIRLA 233
GY K N +E++ + E+ + +P ++++ NLI A +RL
Sbjct: 846 PTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITG 289
+ + + N +I + ++ A +F+ M + ++ S+ S+I G
Sbjct: 906 EEVATF--SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKG 963
Query: 290 YVHHGHIDEAIILFRLL 306
+ I EA++L +
Sbjct: 964 LFRNSKISEALLLLDFI 980
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 208/510 (40%), Gaps = 24/510 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M + ++ PN T +++ KLG+++E + G D T+L+ Y +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP-DFFTYTSLIMGYCQRK 267
Query: 61 GVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A VF +M ++ LI + EA +LF +M + P + T
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK 177
I S + ++ M G++P++ T L+D L S+ KAR++ ++ K
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 178 ----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
+ + YN ++ GY K + +A++V M +SPN + LI ++ A
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKA 446
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITG 289
+ +L + + V N +I + G A + + M R LV ++TSMI
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKE 349
++EA LF L+++ + + V +L+ + G V E H + +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG---KVDEAHLMLEKMLSKNC 563
Query: 350 LSVN---NSLITTYAKCGKLNMARYLFQQMT----ERCLTSWNAMLGAYAMHGNYAEVLK 402
L + N+LI GKL A L ++M + +++ ++ G++
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 403 LFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLL 462
F M KPD T+T+ + G + + + M RE + P Y+ +I
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLIKGY 682
Query: 463 SRAGQLTEAYNLVKSMPSTHSSAALCTLLS 492
GQ A++++K M T + T LS
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 150/352 (42%), Gaps = 39/352 (11%)
Query: 151 ACTALVDLYSKFDVTKARKMFERLRNKDAVI---YNVMMTGYLKNDLPVEAINVFHEMIK 207
+C ++ D D+ + ER K +I YN ++ + L E V+ EM++
Sbjct: 152 SCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLE 211
Query: 208 MSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA--NQIIHTYAKC--G 263
V PN+ + +++ L ++ A +QY++++ A + TY G
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEA---------NQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 264 YLQYARL-----VFNRMR----SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE----N 310
Y Q L VFN M R+ V++T +I G IDEA+ LF ++ +
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 311 LRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMAR 370
+R +V + SL + + L+ VKE+ + + LI + K AR
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP----NIHTYTVLIDSLCSQCKFEKAR 378
Query: 371 YLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTAC 426
L QM E+ L ++NA++ Y G + + + M+ + P+ T+ ++
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 427 SHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
S V + + + M+ E ++P V YN +ID R+G AY L+ M
Sbjct: 439 CKSN-VHKAMGVLNKML-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 116/517 (22%), Positives = 193/517 (37%), Gaps = 83/517 (16%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M ++ L PN +T +L++ K G +++ + R + L+ Y K
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY-NELIKGYCK-S 441
Query: 61 GVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
V A V KM V ++N LI +G A+ L M R ++PD T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 119 NAILSCAELDYLCHGKSIH------GYMIRMGVEPDMVACTALVDLYSKF-DVTKARKMF 171
+ I D LC K + + + GV P++V TAL+D Y K V +A M
Sbjct: 502 SMI------DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 172 ERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDL 227
E++ +K+ ++ +N ++ G + EA + +M+K+ + P V+ LI +
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 228 RDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSW 283
D A S +L I TY + G L A + +MR S DL ++
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 284 TSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQAL------------SQLGCL 331
+S+I GY G + A + + ++ T +SL++ L +L +
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 332 SAVKEVHCLTYRAFHGKELSVN------NSLITTYAKCGKLNMARYLFQQMTERCLTS-- 383
S + E + E SV LI + G L +A +F M S
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 384 ---WNAMLGAYAMHGNYAEVLKLFNHM-------KLGNIK-------------------- 413
+NA+L + E K+ + M +L + K
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 414 --------PDELTFTSILTACSHSGLVEEGLQIFRSM 442
DEL + I+ GLVE ++F M
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 196/473 (41%), Gaps = 91/473 (19%)
Query: 39 RGFGVCDEIFETTLLDMYHKCGGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQAL 96
+GF +++F +++ +Y + G + A +F ++ +V +N ++ L +
Sbjct: 105 QGFHCSEDLF-ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGY------MIRMGVEPDMV 150
+ ++R M P++ T N +L LC + G M G PD V
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTY-NVLLKA-----LCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 151 ACTALVDLYSKFDVTK-ARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMS 209
+ T ++ + + K R++ ER +V YN ++ G K A + EM++
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAERFEPVVSV-YNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 210 VSPNVALFLNLISAVSDLRDIRLARS--------------------IHGYVLRHQYITRV 249
+SPNV + LI+ + + I LA S + G LR +
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 250 EIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRE 309
++ NQ+I + LQ ++V++ +++ G+ HG+I +A+
Sbjct: 337 DLWNQMIRGFG----LQ-----------PNVVAYNTLVQGFCSHGNIVKAV--------- 372
Query: 310 NLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMA 369
S+ + ++GC ++ TY SLI +AK G L+ A
Sbjct: 373 ----------SVFSHMEEIGCSPNIR-----TY-----------GSLINGFAKRGSLDGA 406
Query: 370 RYLFQQM-TERCLTS---WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA 425
Y++ +M T C + + M+ A H + E L M N P TF + +
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 426 CSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+G ++ ++FR M +++ P V YN ++D L++A ++ EAY L + +
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 196/491 (39%), Gaps = 70/491 (14%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE------TTLLD 54
M ++ P+ V+ +++ + ++G ++EGR + E FE L++
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA------------ERFEPVVSVYNALIN 254
Query: 55 MYHKCGGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLP 112
K K A + +M S V S++ LI ++GQ AF QM+ R P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 113 DLLTLANAILSCAELDYLCHGKSIHGYMIR-MGVEPDMVACTALVDLY-SKFDVTKARKM 170
++ TL++ + C + MIR G++P++VA LV + S ++ KA +
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 171 FERLR----NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSD 226
F + + + Y ++ G+ K A+ ++++M+ PNV ++ N++ A+
Sbjct: 375 FSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR 434
Query: 227 LRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR-----DLV 281
+ A S+ + + V N I G L +A VF +M + ++V
Sbjct: 435 HSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIV 494
Query: 282 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 341
++ ++ G I+EA L R + + S T +LL G
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG------------ 542
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVL 401
G L + ++ ++ M N ++ AY G
Sbjct: 543 ---LPGIALQLVGKMMVDGKSPDEITM----------------NMIILAYCKQGKAERAA 583
Query: 402 KLFNHMKLGNIK--PDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPG----EVHY 455
++ + + G K PD +++T+++ S E+G+ + MI IVP V
Sbjct: 584 QMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISA-GIVPSIATWSVLI 642
Query: 456 NC-IIDLLSRA 465
NC I+D + RA
Sbjct: 643 NCFILDDIVRA 653
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 181/462 (39%), Gaps = 70/462 (15%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVC-DEIFETTLLDMYHKC 59
M+ PN T LL A K + + + +G C D + TT++ +
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG--CCPDAVSYTTVISSMCEV 229
Query: 60 GGVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL---T 116
G VK + + V +N LI AFEL R+M+ + + P+++ T
Sbjct: 230 GLVKEGRELAERF---EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 117 LANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERL- 174
L N + + +++ S M++ G P++ ++LV + + A ++ ++
Sbjct: 287 LINVLCNSGQIEL---AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 175 ----RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDI 230
+ V YN ++ G+ + V+A++VF M ++ SPN+ + +LI+
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING------- 396
Query: 231 RLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSM 286
+AK G L A ++N+M + ++V +T+M
Sbjct: 397 ----------------------------FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 287 ITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFH 346
+ H EA L ++ +EN T + ++ L G L ++V +R
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV----FRQME 484
Query: 347 GK-----ELSVNNSLITTYAKCGKLNMA----RYLFQQMTERCLTSWNAMLGAYAMHGNY 397
+ + N L+ AK ++ A R +F + E +++N +L G
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIF 439
L+L M + PDE+T I+ A G E Q+
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 177/432 (40%), Gaps = 49/432 (11%)
Query: 71 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 130
++ + V S++ ++ Y G+ + ++L M + + P+ + I + L
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 131 CHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKD----AVIYNVM 185
+ MIR G+ PD V T L+D + K D+ A K F + ++D + Y +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
++G+ + VEA +FHEM + P+ F LI+ ++ A +H ++++
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYVHHGHIDEAII 301
V +I K G L A + + M ++ ++ S++ G G+I+EA+
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
L + L D+VT +L+ A Y
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDA-----------------------------------YC 537
Query: 362 KCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
K G+++ A+ + ++M + L ++N ++ + +HG + KL N M I P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
TF S++ ++ I++ M + P Y ++ +A + EA+ L +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 478 MPSTHSSAALCT 489
M S ++ T
Sbjct: 657 MKGKGFSVSVST 668
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 180/429 (41%), Gaps = 41/429 (9%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + L PN S++ ++ L E IR+G + D + TTL+D + K G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRG 365
Query: 61 GVKMAAAVFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
++ A+ F +M++ T V ++ +I+ + G +EA +LF +M + + PD +T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 178
I + ++ +H +MI+ G P++V T L+D K
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK----------------- 468
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ DL A + HEM K+ + PN+ + ++++ + +I A + G
Sbjct: 469 ------------EGDLD-SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHG 294
++ Y K G + A+ + M + L V++ ++ G+ HG
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 295 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 354
+++ L + + + ++ T SL++ L A ++ G +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 355 SLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
+L+ + K + A +LFQ+M + +++++ ++ + + E ++F+ M+
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 411 NIKPDELTF 419
+ D+ F
Sbjct: 696 GLAADKEIF 704
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 41/322 (12%)
Query: 166 KARKMFERLRNKDAVIY----NVMMTGYLKNDLPV-EAINVFHEMIKMSVSPNVALFLNL 220
+AR++FE++ N V+ NV +T K+ AI VF E ++ V NVA + +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
I V L I+ A H + +E+ GY + D+
Sbjct: 253 IHFVCQLGRIKEA---------HHLLLLMELK----------GY------------TPDV 281
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
+S+++++ GY G +D+ L +++R+ L+ +S S++ L ++ L+ +E
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGN 396
R + V +LI + K G + A F +M R +T ++ A++ + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 397 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 456
E KLF+ M ++PD +TFT ++ +G +++ ++ MI+ P V Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYT 460
Query: 457 CIIDLLSRAGQLTEAYNLVKSM 478
+ID L + G L A L+ M
Sbjct: 461 TLIDGLCKEGDLDSANELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 177/432 (40%), Gaps = 49/432 (11%)
Query: 71 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYL 130
++ + V S++ ++ Y G+ + ++L M + + P+ + I + L
Sbjct: 273 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 332
Query: 131 CHGKSIHGYMIRMGVEPDMVACTALVDLYSK-FDVTKARKMFERLRNKD----AVIYNVM 185
+ MIR G+ PD V T L+D + K D+ A K F + ++D + Y +
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 186 MTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQY 245
++G+ + VEA +FHEM + P+ F LI+ ++ A +H ++++
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 246 ITRVEIANQIIHTYAKCGYLQYARLVFNRMRS----RDLVSWTSMITGYVHHGHIDEAII 301
V +I K G L A + + M ++ ++ S++ G G+I+EA+
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 302 LFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
L + L D+VT +L+ A Y
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDA-----------------------------------YC 537
Query: 362 KCGKLNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
K G+++ A+ + ++M + L ++N ++ + +HG + KL N M I P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
TF S++ ++ I++ M + P Y ++ +A + EA+ L +
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 478 MPSTHSSAALCT 489
M S ++ T
Sbjct: 657 MKGKGFSVSVST 668
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 180/429 (41%), Gaps = 41/429 (9%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + L PN S++ ++ L E IR+G + D + TTL+D + K G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRG 365
Query: 61 GVKMAAAVFGKMNATSTT--VGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
++ A+ F +M++ T V ++ +I+ + G +EA +LF +M + + PD +T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKD 178
I + ++ +H +MI+ G P++V T L+D K
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK----------------- 468
Query: 179 AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHG 238
+ DL A + HEM K+ + PN+ + ++++ + +I A + G
Sbjct: 469 ------------EGDLD-SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 239 YVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHG 294
++ Y K G + A+ + M + L V++ ++ G+ HG
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 295 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 354
+++ L + + + ++ T SL++ L A ++ G +
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 355 SLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
+L+ + K + A +LFQ+M + +++++ ++ + + E ++F+ M+
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 411 NIKPDELTF 419
+ D+ F
Sbjct: 696 GLAADKEIF 704
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 145/322 (45%), Gaps = 41/322 (12%)
Query: 166 KARKMFERLRNKDAVIY----NVMMTGYLKNDLPV-EAINVFHEMIKMSVSPNVALFLNL 220
+AR++FE++ N V+ NV +T K+ AI VF E ++ V NVA + +
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 221 ISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL 280
I V L I+ A H + +E+ GY + D+
Sbjct: 253 IHFVCQLGRIKEA---------HHLLLLMELK----------GY------------TPDV 281
Query: 281 VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCL 340
+S+++++ GY G +D+ L +++R+ L+ +S S++ L ++ L+ +E
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 341 TYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGN 396
R + V +LI + K G + A F +M R +T ++ A++ + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 397 YAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYN 456
E KLF+ M ++PD +TFT ++ +G +++ ++ MI+ P V Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYT 460
Query: 457 CIIDLLSRAGQLTEAYNLVKSM 478
+ID L + G L A L+ M
Sbjct: 461 TLIDGLCKEGDLDSANELLHEM 482
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 180/398 (45%), Gaps = 24/398 (6%)
Query: 99 FELFRQMIHRKVLPDLLTLANAILS-CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD 157
E+FR+M+ V + +L + C + K I + ++ G++P+ +++
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK-GIKPEAYTYNTIIN 267
Query: 158 LYSKFDVTKARKMFERLRNKDAVIYN-----VMMTGYLKNDLPVEAINVFHEMIKMSVSP 212
Y K + ++ KD V+YN ++M +KN +A +F EM + +
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 213 NVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVF 272
+V ++ +LIS +++ A + + +I K G + A ++
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 273 NRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQL 328
N M+S+ + V + ++I GY G +DEA +++ +++++ + D T ++ ++L
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 329 GCLSAVKEVHCLTYRAFHG----KELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT-- 382
K+ +R G +S N LI Y K G + A+ LF +M+ + +
Sbjct: 448 KRYDEAKQ---WLFRMMEGGVKLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 383 --SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFR 440
++N M+ AY G E KL +M+ + PD T+TS++ + V+E +++F
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 441 SMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
M + + V Y +I LS+AG+ EA+ L M
Sbjct: 564 EMGLK-GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/462 (20%), Positives = 197/462 (42%), Gaps = 45/462 (9%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M + P+ V LL A AKL + I + G+ +++ TTL+D + +C
Sbjct: 70 MAESHPLPSIVDFSRLLIAIAKLNKYEA--VISLFRHLEMLGISHDLYSFTTLIDCFCRC 127
Query: 60 GGVKMAAAVFGKMN--ATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
+ +A + GKM ++ ++ L+ + H + EA L Q++ P+++
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD--LYSKFDVTKARKMFERLR 175
I S E + + +M +MG+ PD+V +L+ +S AR + + +R
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMR 247
Query: 176 ---NKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRL 232
+ D + ++ ++ Y K +EA ++EMI+ SV+PN+ + +LI+ +
Sbjct: 248 MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL-------- 299
Query: 233 ARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVH 292
IHG ++ A ++++ G+ A V++ ++I GY
Sbjct: 300 --CIHGL---------LDEAKKVLNVLVSKGFFPNA------------VTYNTLINGYCK 336
Query: 293 HGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSV 352
+D+ + + ++ R+ + D+ T +L Q Q G SA ++V ++
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 353 NNSLITTYAKCGKLNMARYLFQQM----TERCLTSWNAMLGAYAMHGNYAEVLKLFNHMK 408
N L+ GK+ A + + T + ++N ++ + LF +
Sbjct: 397 FNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLA 456
Query: 409 LGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVP 450
L + PD +T+ +++ L E +++R M +E ++P
Sbjct: 457 LKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 190/420 (45%), Gaps = 22/420 (5%)
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 149
LH+ + +A LF M LP ++ + +++ A+L+ S+ ++ +G+ D+
Sbjct: 55 LHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 150 VACTALVDLYSK-----FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
+ T L+D + + ++ KM + V + ++ G+ + EA+++ +
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 205 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV----LRHQYITRVEIANQIIHTYA 260
++ + PNV ++ +I ++ + + A + ++ +R +T + ++ H+
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 261 KCGYLQYARLVFNRMR---SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVT 317
+ AR++ + MR S D+++++++I Y G + EA + + + ++ + VT
Sbjct: 235 ---WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Query: 318 LISLLQALSQLGCLSAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQM 376
SL+ L G L K+V + L + F ++ N+LI Y K +++ + M
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTY-NTLINGYCKAKRVDDGMKILCVM 350
Query: 377 TERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLV 432
+ + ++N + Y G ++ K+ M + PD TF +L G +
Sbjct: 351 SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
Query: 433 EEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHSSAALCTLLS 492
+ L + + T+V G + YN II L +A ++ +A+ L S+ S + T ++
Sbjct: 411 GKALVRLEDLQKSKTVV-GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 174/437 (39%), Gaps = 80/437 (18%)
Query: 89 YLHNGQALEAFELFRQMIHRKVLPDLLTL-----------------------------AN 119
+LHN +A EA L QM+ R PDL+T AN
Sbjct: 199 FLHN-KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 120 AILSCAELDYLCHGKSIH------GYMIRMGVEPDMVACTALVDLYSKF----DVTKA-R 168
++ +D LC + + M G+ P++V +L++ + D ++
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 169 KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
M E+ N + V +N ++ + K VEA + EMI+ S+ P+ + LI+
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 229 DIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWT 284
+ A+ + +++ + ++ N +I+ + KC ++ +F M R LV ++T
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 285 SMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRA 344
++I G+ G D A ++F+ + + D +T LL L G L
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA---------- 487
Query: 345 FHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLF 404
L + +YL + E + +N M+ G E LF
Sbjct: 488 ---------------------LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Query: 405 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 464
+ +IKPD +T+ ++++ L++E +FR M +E +P YN +I R
Sbjct: 527 CSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKM-KEDGTLPNSGTYNTLIRANLR 582
Query: 465 AGQLTEAYNLVKSMPST 481
+ L+K M S+
Sbjct: 583 DCDRAASAELIKEMRSS 599
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 199/484 (41%), Gaps = 49/484 (10%)
Query: 62 VKMAAAVFGKMNATST--TVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLAN 119
V A +FG M + ++ +N L++A + L QM + DL T +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 120 AILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-----VTKARKMFERL 174
I L ++ M+++G EPD+V ++L++ Y V +M E
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 175 RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLAR 234
D + ++ G ++ EA+ + +M++ P++ + +++ + DI LA
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLVSWTSMITGYVHHG 294
++ + ++E A R+++ ++V + ++I +
Sbjct: 244 NL---------LNKMEAA---------------------RIKA-NVVIFNTIIDSLCKYR 272
Query: 295 HIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNN 354
H++ A+ LF ++ + +R + VT SL+ L G S + + N
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 355 SLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLG 410
+LI + K GKL A L ++M +R + ++N ++ + MH E ++F M
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 411 NIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTE 470
+ P+ T+ +++ VE+G+++FR M + +V V Y II +AG
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 471 AYNLVKSMPSTHSSAALCT---LLSACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNI 527
A + K M S + T LL YG + I K + K E + + I N
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN---IFIYNT 508
Query: 528 LAEG 531
+ EG
Sbjct: 509 MIEG 512
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 185/432 (42%), Gaps = 26/432 (6%)
Query: 81 SWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHG-- 138
+++ I + Q A + +M+ PD++TL++ L+ CH K I
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL------LNGYCHSKRISDAV 173
Query: 139 ----YMIRMGVEPDMVACTALVD---LYSKFD--VTKARKMFERLRNKDAVIYNVMMTGY 189
M+ MG +PD T L+ L++K V +M +R D V Y ++ G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 190 LKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRV 249
K A+N+ ++M + NV +F +I ++ R + +A + + V
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 250 EIANQIIHTYAKCG-YLQYARLVFNRMRSR---DLVSWTSMITGYVHHGHIDEAIILFRL 305
N +I+ G + +RL+ N + + ++V++ ++I + G + EA L
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 306 LQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGK 365
+ + ++ D++T L+ L K++ + N+LI + KC +
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 366 LNMARYLFQQMTERCL----TSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTS 421
+ LF++M++R L ++ ++ + G+ +F M + D +T++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 422 ILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPST 481
+L G ++ L IF+ +++ + YN +I+ + +AG++ EA++L S+
Sbjct: 474 LLHGLCSYGKLDTALVIFK-YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532
Query: 482 HSSAALCTLLSA 493
T++S
Sbjct: 533 PDVVTYNTMISG 544
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 190/457 (41%), Gaps = 55/457 (12%)
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
+A +LF M+ + P ++ + + A+++ S+ M +G+ D+ + +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 157 DLY---SKFDVTKA--RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVS 211
+ + S+ + A KM + D V + ++ GY + +A+ + +M++M
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 212 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 271
P+ F LI HG L ++ V + +Q++
Sbjct: 186 PDTFTFTTLI---------------HGLFLHNKASEAVALVDQMVQ-------------- 216
Query: 272 FNRMRSRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL 331
R DLV++ +++ G G ID A+ L ++ ++ + V +++ +L C
Sbjct: 217 --RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL----CK 270
Query: 332 SAVKEVHCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTERCLT----S 383
EV + K + N NSLI G+ + A L M E+ + +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 384 WNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTA-CSHSGLVEEGLQIFRSM 442
+NA++ A+ G E KL M +I PD +T+ ++ C H+ L +E Q+F+ M
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL-DEAKQMFKFM 389
Query: 443 IREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPS---THSSAALCTLLSACRLYGD 499
+ + +P YN +I+ + ++ + L + M ++ T++ GD
Sbjct: 390 VSK-DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 500 TEIGEAIAKQILKLE-PRNSSSYVLISNILAEGGRWD 535
+ + + KQ++ P + +Y ++ + L G+ D
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 203/452 (44%), Gaps = 32/452 (7%)
Query: 50 TTLLDMYHKCGGVKMAAAVFGK---MNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 106
+ +++ + +C + +A + GK + T+ +++ LI G+ EA EL +M+
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTI-TFSTLINGLCLEGRVSEALELVDRMV 185
Query: 107 HRKVLPDLLTLANAILSCAELDYLC-HGKSIHGY-----MIRMGVEPDMVACTALVDLYS 160
PDL+T+ + + LC GK M+ G +P+ V ++++
Sbjct: 186 EMGHKPDLITINTLV------NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 161 KFDVTKA-----RKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVA 215
K T RKM ER DAV Y++++ G K+ A N+F+EM ++ N+
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 216 LFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRM 275
+ LI + + +++ + V + +I ++ K G L+ A + M
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 276 RSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCL 331
R D +++TS+I G+ H+D+A + L+ + + T L+ + +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 332 SAVKEV-HCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER----CLTSWNA 386
E+ ++ R ++ N +LI + + GKLN+A+ LFQ+M R + ++
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYN-TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 387 MLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREY 446
+L +G + L++F ++ ++ D + I+ ++ V++ +F S+ +
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK- 537
Query: 447 TIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
+ PG YN +I L + G L+EA L + M
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 186/447 (41%), Gaps = 51/447 (11%)
Query: 8 PNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAA 67
PN VT +L+ K G + R + D + + ++D K G + A
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKHGSLDNAFN 284
Query: 68 VFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCA 125
+F +M +T + ++N LI + + G+ + +L R MI RK+ P+++T + I S
Sbjct: 285 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344
Query: 126 ELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK--DAVI- 181
+ L + +H MI G+ PD + T+L+D + K + + KA +M + + +K D I
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404
Query: 182 -YNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYV 240
+N+++ GY K + + + +F +M S+ G V
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKM-----------------------------SLRGVV 435
Query: 241 LRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHI 296
N +I + + G L A+ +F M SR ++V++ ++ G +G
Sbjct: 436 ------ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 297 DEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSL 356
++A+ +F +++ + +D ++ + + ++ C + N +
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 357 ITTYAKCGKLNMARYLFQQMTE--RCLTSW--NAMLGAYAMHGNYAEVLKLFNHMKLGNI 412
I K G L+ A LF++M E W N ++ A+ G+ + +KL +K
Sbjct: 550 IGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Query: 413 KPDELTFTSILTACSHSGLVEEGLQIF 439
D T ++ S L + L +
Sbjct: 610 SVDASTIKMVIDMLSDGRLKKSFLDML 636
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 181/437 (41%), Gaps = 51/437 (11%)
Query: 94 QALEAFELFRQMIHRKVLP---DLLTLANAILSCAELDY--------------------- 129
+A +A +LFR MIH + LP D L +AI + D
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 130 -----------LCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERL--- 174
LC S G +I++G EP+ + + L++ L + V++A ++ +R+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 175 -RNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
D + N ++ G + EA+ + +M++ PN + +++ + LA
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITG 289
+ + + II K G L A +FN M + +++++ +I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHC-LTYRAFHGK 348
+ + G D+ L R + + + + VT L+ + + G L +E+H + +R
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 349 ELSVNNSLITTYAKCGKLNMARYLFQQMTER-C---LTSWNAMLGAYAMHGNYAEVLKLF 404
++ SLI + K L+ A + M + C + ++N ++ Y + L+LF
Sbjct: 368 TITY-TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 405 NHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSR 464
M L + D +T+ +++ G + ++F+ M+ + P V Y ++D L
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCD 485
Query: 465 AGQLTEAYNLVKSMPST 481
G+ +A + + + +
Sbjct: 486 NGESEKALEIFEKIEKS 502
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 136/338 (40%), Gaps = 47/338 (13%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M +++ PN VT L+ + K G L+E +H I RG D I T+L+D + K
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP-DTITYTSLIDGFCKEN 382
Query: 61 GVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
+ A + M + ++N LI Y + + ELFR+M R V+ D +T
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 119 NAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRNK 177
I EL L K + M+ V P++V L+D L + KA ++FE++
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 178 ----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLA 233
D IYN+++ G +A ++F + V P V +
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY---------------- 546
Query: 234 RSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR----SRDLVSWTSMITG 289
N +I K G L A L+F +M + D ++ +I
Sbjct: 547 -------------------NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 290 YVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
++ G +++ L L+R +D+ T+ ++ LS
Sbjct: 588 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 12/302 (3%)
Query: 61 GVKMAAAVFGKMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANA 120
G KM + G+ N V +++ LI ++ G+ LEA EL+ +MI R + PD +T +
Sbjct: 299 GAKMLREMIGR-NIIPDVV-TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 121 ILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFD-VTKARKMFERLRNK-- 177
I + + L + M+ G EPD+V + L++ Y K V ++F + +K
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 178 --DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARS 235
+ + YN ++ G+ ++ A +F EM+ V P+V + L+ + D ++ A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYV 291
I + + + + I N IIH + A +F + + D+V++ MI G
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQA-LSQLGCLSAVKEVHCLTYRAFHGKEL 350
G + EA +LFR ++ + D T L++A L G +S+V+ + + F
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 351 SV 352
++
Sbjct: 597 TI 598
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 202/496 (40%), Gaps = 61/496 (12%)
Query: 50 TTLLDMYHKCGGVKMAAAVFG---KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMI 106
T +++ Y + + A +V G K+ T+ +++ L+ + G+ EA L +M+
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI-TFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 107 HRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSK----- 161
K PDL+T++ I + + M+ G +PD V +++ K
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 162 FDVTKARKMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLI 221
+ RKM ER V Y++++ K+ +A+++F+EM + +V + +LI
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 222 SAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR--- 278
+ + + ++ I V + +I + K G L A+ ++N M +R
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 279 -DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEV 337
D +++ S+I G+ + EA +F L+ + D VT L+ + C + +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY----CKAKRVDD 403
Query: 338 HCLTYRAFHGKELSVN----NSLITTYAKCGKLNMARYLFQQMTER----CLTSWNAMLG 389
+R K L N N+L+ + + GKLN A+ LFQ+M R + ++ +L
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 390 AYAMHGNYAEVLKLFNHMK-----LG------------------------------NIKP 414
+G + L++F M+ LG +KP
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 415 DELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNL 474
D +T+ ++ G + E +FR M +E P + YN +I L + L
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 475 VKSMPSTHSSAALCTL 490
++ M SA T+
Sbjct: 583 IEEMKVCGFSADSSTI 598
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 176/432 (40%), Gaps = 47/432 (10%)
Query: 71 KMNATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLL---TLANAILSCAEL 127
K + S ++ +W LI A+ G+ EA ++M + DL+ +L C EL
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 128 DYLCHGKSIHGYMIRMGVEPDMVACTALVDLYSKFDVTKARKMFERLRNKDAVIYNVMMT 187
D GK++ ++ G P C A+ YN ++
Sbjct: 264 D---RGKALFDEVLERGDSP----C--------------------------AITYNTLIR 290
Query: 188 GYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYIT 247
G+ K EA +F MI+ V PNV + LI + + + A + ++
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 248 RVEIANQIIHTYAKCGYLQYARLVFNRMRSR----DLVSWTSMITGYVHHGHIDEAIILF 303
N II+ K G + A + M+ R D +++ ++ G G +DEA L
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 304 RLLQRENLRIDS--VTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA 361
L+ +++ D ++ +L+ L + L +++ L + N L+ +
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 362 KCGKLNMARYLFQQMTE----RCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDEL 417
K G +N A L++Q+++ R ++ AM+ + G L M++ ++P
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 418 TFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKS 477
+ +L++ G +++ ++F M R+ P V +N +ID +AG + A +L+
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 478 MPSTHSSAALCT 489
M S L T
Sbjct: 590 MSRAGLSPDLFT 601
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 160/387 (41%), Gaps = 16/387 (4%)
Query: 6 LYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMA 65
L + V SL+ G L G+A+ + RG C I TL+ + K G +K A
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC-AITYNTLIRGFCKLGQLKEA 301
Query: 66 AAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILS 123
+ +F M V ++ LI G+ EA +L MI + P+ +T I
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 124 CAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMF------ERLRN 176
+ + I M + PD + L+ L +K D+ +A K+ +
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 177 KDAVIYNVMMTGYLKNDLPVEAINVFHEMI-KMSVSPNVALFLNLISAVSDLRDIRLARS 235
D + YN ++ G K + +A++++ ++ K+ V + L+++ D+ A
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI-LLNSTLKAGDVNKAME 480
Query: 236 IHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYV 291
+ + + + + +I + K G L A+ + +MR +L + +++
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 292 HHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELS 351
G +D+A LF +QR+N D V+ ++ + G + + + + RA +L
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 352 VNNSLITTYAKCGKLNMARYLFQQMTE 378
+ LI + K G L+ A F +M +
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVD 627
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 193/467 (41%), Gaps = 32/467 (6%)
Query: 11 VTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCGGVKMAAAVFG 70
VT L+ A K G + E G D + T+L+ + CG + A+F
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA-DLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 71 KM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELD 128
++ S ++N LI + GQ EA E+F MI R V P++ T I D
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI------D 325
Query: 129 YLCH-GKS-----IHGYMIRMGVEPDMVACTALVDLYSK----FDVTKARKMFERLRNK- 177
LC GK+ + MI EP+ V +++ K D + ++ ++ R +
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 178 DAVIYNVMMTGYL-KNDLPVEAINVFHEMIKMS--VSPNVALFLNLISAVSDLRDIRLAR 234
D + YN+++ G K DL EA + + M+K S P+V + LI + + A
Sbjct: 386 DNITYNILLGGLCAKGDLD-EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 235 SIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSRDLV----SWTSMITGY 290
I+ ++ N ++++ K G + A ++ ++ +V ++T+MI G+
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 291 VHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKEL 350
G ++ A L ++ L+ LL +L + G L + R + ++
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 351 SVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNYAEVLKLFNH 406
N +I K G + A L M+ L+ +++ ++ + G E + F+
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 407 MKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGEV 453
M +PD S+L C G ++ ++ + ++ + ++ E+
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 21/300 (7%)
Query: 198 AINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIH 257
A + + +M++ N L+ +R A + +L+ + + N I
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFA--FNVYNHNIL 148
Query: 258 TYAKCGYLQYARLV--FNRMRSR----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENL 311
C L+ + V MR D+ S+ ++I G+ +++A+ L ++
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 312 RIDSVTLISLLQALSQLG----CLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLN 367
VT L+ A + G + +KE+ + A +L V SLI + CG+L+
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA----DLVVYTSLIRGFCDCGELD 264
Query: 368 MARYLFQQMTER----CLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSIL 423
+ LF ++ ER C ++N ++ + G E ++F M ++P+ T+T ++
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 424 TACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSMPSTHS 483
G +E LQ+ MI E P V YN II+ L + G + +A +V+ M +
Sbjct: 325 DGLCGVGKTKEALQLLNLMI-EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 207/484 (42%), Gaps = 36/484 (7%)
Query: 97 EAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALV 156
+A ++ MI ++P ++T + SC + L I M R +E V L+
Sbjct: 221 KASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 280
Query: 157 DLYSKF-DVTKARKMFERLRNKDAVI----YNVMMTGYLKNDLPVEAINVFHEMIKMSVS 211
+ +SK + +AR+ +R + +N ++ GY K L +A V EM+ +
Sbjct: 281 NGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY 340
Query: 212 PNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLV 271
P + + I A+ D I AR + L V N ++H Y K G A L+
Sbjct: 341 PTTSTYNIYICALCDFGRIDDAREL----LSSMAAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 272 FNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQ 327
F+ +R+ D+ V++ ++I G G+++ A L + + + D +T +L++ +
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 328 LGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYA----KCGKLNMARYLFQQMTERC--- 380
G LS EV+ R K + + TT A + G + A L ++M
Sbjct: 457 NGNLSMATEVYDEMLR----KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 381 --LTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQI 438
LT +N + GN + ++ + + PD +T+T+++ +G + +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 439 FRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM------PSTHSSAALCTLLS 492
+ M+R+ + P + Y +I ++AG+L +A+ M P+ + AL L
Sbjct: 573 YDEMLRK-RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL--LYG 629
Query: 493 ACRLYGDTEIGEAIAKQILKLEPRNSSSYVLISNILAEGGRWDEVAHIRAMTKDKELKST 552
C+ E + K + P N SY ++ + + +W+EV + DKE++
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Query: 553 PGYS 556
GY+
Sbjct: 690 -GYT 692
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 191/446 (42%), Gaps = 35/446 (7%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFETTLLDMYHKCG 60
M+ + + + VT L++ +K G ++E R HG R GF V F L++ Y K G
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSF-NPLIEGYCKQG 322
Query: 61 GVKMAAAVFGKM-NA-TSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTLA 118
A V +M NA T ++N I A G+ +A EL M PD+++
Sbjct: 323 LFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSY- 377
Query: 119 NAILSCAELDYLCHGKSIHGYM----IRMG-VEPDMVACTALVD-LYSKFDVTKARKMFE 172
N ++ Y+ GK + + +R G + P +V L+D L ++ A+++ E
Sbjct: 378 NTLMH----GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 173 RLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLR 228
+ + D + Y ++ G++KN A V+ EM++ + P+ + AV +LR
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELR 491
Query: 229 --DIRLARSIH-GYVLRHQYITRVEIANQIIHTYAKCGYL----QYARLVFNRMRSRDLV 281
D A +H V + + I N I K G L ++ R +F D V
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 282 SWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLT 341
++T++I GY+ +G A L+ + R+ L +T L+ ++ G L +
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 342 YRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCLT----SWNAMLGAYAMHGNY 397
+ + +N+L+ K G ++ A +M E + S+ ++ +
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 398 AEVLKLFNHMKLGNIKPDELTFTSIL 423
EV+KL+ M I+PD T ++
Sbjct: 672 EEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 125/294 (42%), Gaps = 5/294 (1%)
Query: 189 YLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITR 248
Y K + + + F +MI+ P+V ++ + D R + A +++ ++ H +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 249 VEIANQIIHTYAKCGYLQYARLVFNRMRSRDL----VSWTSMITGYVHHGHIDEAIILFR 304
V N ++ + K G L+ ++ M+ R++ V++ +I G+ +G ++EA
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 305 LLQRENLRIDSVTLISLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCG 364
++R + + L++ + G V A S N I G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 365 KLNMARYLFQQMTERCLTSWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILT 424
+++ AR L M + S+N ++ Y G + E LF+ ++ G+I P +T+ +++
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 425 ACSHSGLVEEGLQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
SG + EG Q + + I P + Y ++ + G L+ A + M
Sbjct: 418 GLCESGNL-EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/379 (19%), Positives = 146/379 (38%), Gaps = 44/379 (11%)
Query: 102 FRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYS 160
F +MI + LP + + + + +++ MI G+ P ++ ++D +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 161 KFDVTKARKMFERLRNKD----AVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVAL 216
D+ + K++ ++ ++ V YN+++ G+ KN EA +M + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 217 FLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMR 276
F LI A + +L N I G + AR + + M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 277 SRDLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAVKE 336
+ D+VS+ +++ GY+ G EA +LF L+ ++ VT
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY------------------ 412
Query: 337 VHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERCL----TSWNAMLGAYA 392
N+LI + G L A+ L ++MT + + ++ ++ +
Sbjct: 413 -----------------NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 393 MHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIVPGE 452
+GN + ++++ M IKPD +T+ G ++ ++ M+ P
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 453 VHYNCIIDLLSRAGQLTEA 471
YN ID L + G L +A
Sbjct: 516 TIYNVRIDGLCKVGNLVKA 534
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 182/403 (45%), Gaps = 16/403 (3%)
Query: 90 LHNGQALEAFELFRQMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDM 149
LH + +AF LF +M+ + +P ++ + A+++ ++ M +G+ D+
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 150 VACTALVDLYSKFDVTKAR-----KMFERLRNKDAVIYNVMMTGYLKNDLPVEAINVFHE 204
+ T L+ + + KM + V ++ G+ + + EA+++
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 205 MIKMSVSPNVALFLNLISAVSDLRDIRLARSIHGYVLRHQYITRVEIA-NQIIHTYAKCG 263
M PNV ++ +I+ + RD+ A + Y + + I + N +I + G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF-YCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 264 -YLQYARLVFNRMRSR---DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLI 319
+ ARL+ + ++ + +++ +T++I +V G++ EA L++ + R ++ + T
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 320 SLLQALSQLGCLSAVKEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTER 379
SL+ GCL K + L ++ N+LIT + K ++ LF +MT +
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 380 CLT----SWNAMLGAYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEG 435
L ++N ++ Y G K+FN M + PD +T+ +L ++G +E+
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 436 LQIFRSMIREYTIVPGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
L + + + V + YN II L R +L EA+ L +S+
Sbjct: 414 LVMVEDLQKSEMDVD-IITYNIIIQGLCRTDKLKEAWCLFRSL 455
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 51/389 (13%)
Query: 104 QMIHRKVLPDLLTLANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKF 162
+M+ P ++TL + + + + S+ M G P++V +++ L
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 163 DVTKARKMFERLRNK----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFL 218
D+ A ++F + K DAV YN +++G + +A + +M+K + PNV F
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 219 NLISAVSDLRDIRLARSIHGYVLRHQYITRVEIANQIIHTYAKCGYLQYARLVFNRMRSR 278
LI ++ AR+++ ++R + V N +I+ + G L A+ +F+ M S+
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 279 ----DLVSWTSMITGYVHHGHIDEAIILFRLLQRENLRIDSVTLISLLQALSQLGCLSAV 334
D+V++ ++ITG+ +++ + LF + + L D+ T +L+
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI------------ 366
Query: 335 KEVHCLTYRAFHGKELSVNNSLITTYAKCGKLNMARYLFQQMTERC-----LTSWNAMLG 389
HG Y + GKLN+A+ +F +M + C + ++N +L
Sbjct: 367 -----------HG------------YCQAGKLNVAQKVFNRMVD-CGVSPDIVTYNILLD 402
Query: 390 AYAMHGNYAEVLKLFNHMKLGNIKPDELTFTSILTACSHSGLVEEGLQIFRSMIREYTIV 449
+G + L + ++ + D +T+ I+ + ++E +FRS+ R+ +
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVK 461
Query: 450 PGEVHYNCIIDLLSRAGQLTEAYNLVKSM 478
P + Y +I L R G EA L + M
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 1 MQDQRLYPNRVTLVSLLHAAAKLGSLQEGRAIHGYAIRRGFGVCDEIFE-TTLLDMYHKC 59
M +++ PN + +L+ K G+L E R ++ IRR V +F +L++ +
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR--SVVPNVFTYNSLINGFCIH 302
Query: 60 GGVKMAAAVFGKM--NATSTTVGSWNPLIAAYLHNGQALEAFELFRQMIHRKVLPDLLTL 117
G + A +F M V ++N LI + + + + +LF +M ++ ++ D T
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 118 ANAILSCAELDYLCHGKSIHGYMIRMGVEPDMVACTALVD-LYSKFDVTKARKMFERLRN 176
I + L + + M+ GV PD+V L+D L + + KA M E L+
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 177 K----DAVIYNVMMTGYLKNDLPVEAINVFHEMIKMSVSPNVALFLNLISAV 224
D + YN+++ G + D EA +F + + V P+ ++ +IS +
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474