Miyakogusa Predicted Gene

Lj5g3v2300390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2300390.1 Non Chatacterized Hit- tr|I1NJC2|I1NJC2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,83.11,0,seg,NULL;
UPF0061,Uncharacterised protein family UPF0061; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,CUFF.57319.1
         (615 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13030.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   945   0.0  

>AT5G13030.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
           growth stages; CONTAINS InterPro DOMAIN/s:
           Uncharacterised protein family UPF0061
           (InterPro:IPR003846); Has 5046 Blast hits to 4997
           proteins in 1211 species: Archae - 8; Bacteria - 2327;
           Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0;
           Other Eukaryotes - 2409 (source: NCBI BLink). |
           chr5:4133216-4136461 FORWARD LENGTH=633
          Length = 633

 Score =  945 bits (2442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/570 (77%), Positives = 501/570 (87%), Gaps = 5/570 (0%)

Query: 51  DQDLHSVTQDFKNHSLHG---GRKLN--LEDLNWDNSFVRELPPDPRTDSLPREVLHACY 105
           D    S+ +D +N SL     G K+   LED NWD+SFV+ELP DPRTD + REVLHACY
Sbjct: 64  DSSADSLAKDLQNQSLGAVDEGVKIKKKLEDFNWDHSFVKELPGDPRTDVISREVLHACY 123

Query: 106 SKVSPSVEVDDPQLVAWSQPVADLLDLDHQEFERPEFPLFFSGATPLVGAFPYAQCYGGH 165
           SKVSPSVEVDDPQLVAWS  VA+LLDLD +EFERP+FPL  SGA PL GA  YAQCYGGH
Sbjct: 124 SKVSPSVEVDDPQLVAWSVSVAELLDLDPKEFERPDFPLMLSGAKPLPGAMSYAQCYGGH 183

Query: 166 QFGMWAGQLGDGRAITLGEILNAKSERWELQLKGSGKTPYSRFADGLAVLRSSVREFLCS 225
           QFGMWAGQLGDGRAITLGE+LN+K ERWELQLKG+G+TPYSRFADGLAVLRSS+REFLCS
Sbjct: 184 QFGMWAGQLGDGRAITLGEVLNSKGERWELQLKGAGRTPYSRFADGLAVLRSSIREFLCS 243

Query: 226 EAMHHLGIPTSRALCLVTTGKLVTRDMFYDGNPKEEPGAIVCRVAQSFLRFGSFQIHASR 285
           E MH LGIPT+RALCL+TTG+ VTRDMFYDGNPKEEPGAIVCRV+QSFLRFGS+QIHASR
Sbjct: 244 ETMHCLGIPTTRALCLLTTGQNVTRDMFYDGNPKEEPGAIVCRVSQSFLRFGSYQIHASR 303

Query: 286 GNEDIGIVRGLADYAIKHHFPHIENMSKSETLSFSTGDEDHSVVDLTSNKYAAWAVEVAE 345
           G ED+ IVR LADYAIKHHFPHIE+M +S++LSF TGDED SVVDLTSNKYAAW VE+AE
Sbjct: 304 GKEDLDIVRKLADYAIKHHFPHIESMDRSDSLSFKTGDEDDSVVDLTSNKYAAWIVEIAE 363

Query: 346 RTASLIARWQGVGFTHGVMNTDNMSILGLTIDYGPFGFLDAFDPKFTPNTTDLPGRRYCF 405
           RTA+L+ARWQGVGFTHGV+NTDNMSILG TIDYGPFGFLDAFDP +TPNTTDLPGRRYCF
Sbjct: 364 RTATLVARWQGVGFTHGVLNTDNMSILGQTIDYGPFGFLDAFDPSYTPNTTDLPGRRYCF 423

Query: 406 ANQPDIGLWNLAQFTAALSTAHLIDDKEANYALERYGTRFMDDYQAIMTKKLGLPKYNKQ 465
           ANQPDIGLWN+AQF+  L+ A LI+ KEANYA+ERYG +FMD+YQAIM+KKLGL KYNK+
Sbjct: 424 ANQPDIGLWNIAQFSKTLAVAQLINQKEANYAMERYGDKFMDEYQAIMSKKLGLTKYNKE 483

Query: 466 LIGKLLSNMAVDKVDYTNFFRTLSNIKADTSIPDDELLVPLKSVLLDMGKERKEAWTSWL 525
           +I KLL+NM+VDKVDYTNFFR L+N+KA+ + P++ELL PLK+VLLD+GKERKEAW  W+
Sbjct: 484 VISKLLNNMSVDKVDYTNFFRLLANVKANPNTPENELLKPLKAVLLDIGKERKEAWIKWM 543

Query: 526 KTYIHELYTGGISDEERKTSMDLINPKYILRNYLCQTAIDAAEIGDFGEVRRLLKLMEHP 585
           ++YI E+    +SDEERK  MD +NPKYILRNYLCQ+AIDAAE GDF EV  L++LM+ P
Sbjct: 544 RSYIQEVGGSEVSDEERKARMDSVNPKYILRNYLCQSAIDAAEQGDFSEVNNLIRLMKRP 603

Query: 586 FDEQPGMEKYARLPPAWAYRPGVCMLSCSS 615
           ++EQPGMEKYARLPPAWAYRPGVCMLSCSS
Sbjct: 604 YEEQPGMEKYARLPPAWAYRPGVCMLSCSS 633