Miyakogusa Predicted Gene
- Lj5g3v2298210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2298210.1 Non Chatacterized Hit- tr|I1J8W8|I1J8W8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.59,0,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL;
FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide,CUFF.57303.1
(668 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 695 0.0
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 438 e-123
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-118
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 412 e-115
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 411 e-115
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 388 e-108
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 388 e-108
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 368 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 356 2e-98
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 354 1e-97
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 351 1e-96
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 4e-96
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 349 4e-96
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 9e-96
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 2e-95
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 346 3e-95
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 345 5e-95
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 342 4e-94
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 1e-92
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 1e-90
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 3e-87
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 317 2e-86
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 4e-86
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 314 1e-85
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 9e-84
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 305 8e-83
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 9e-83
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 1e-82
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 304 1e-82
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 2e-82
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 302 6e-82
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 7e-82
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 299 5e-81
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 295 6e-80
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 1e-79
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 1e-79
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 1e-79
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 294 2e-79
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 293 4e-79
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 6e-79
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 9e-79
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 287 2e-77
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 287 2e-77
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 281 1e-75
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 276 3e-74
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 1e-73
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 6e-73
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 6e-72
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 266 3e-71
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 3e-69
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 257 2e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 257 2e-68
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 253 3e-67
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 253 3e-67
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 4e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 8e-67
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 9e-65
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 237 2e-62
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 236 3e-62
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 236 5e-62
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 233 3e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 8e-61
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 9e-61
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 4e-60
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 229 4e-60
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 226 3e-59
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 5e-59
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 9e-59
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 223 5e-58
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 2e-56
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 4e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 8e-55
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 210 3e-54
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 6e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 1e-49
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 4e-48
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 179 6e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 9e-44
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 1e-39
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 139 9e-33
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 4e-29
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 124 2e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 122 9e-28
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 114 2e-25
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 113 3e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 4e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 6e-25
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 8e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 105 7e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 1e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 5e-21
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 1e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 94 4e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 93 5e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 8e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 92 8e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-17
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 86 7e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 2e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 82 1e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 77 6e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 1e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 74 3e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 68 2e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 5e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 56 8e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 56 9e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 1e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/662 (50%), Positives = 465/662 (70%), Gaps = 5/662 (0%)
Query: 9 VTTATQCESLLRKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 68
+++ Q +SLL F+A+ S+S+TK LH +
Sbjct: 12 LSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARK- 70
Query: 69 XLFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLT-LPDNFTYPIIIKACSD 127
LF+ +PQ SL S+N ++RMYV+ G HDA+++F+ M+ G+ +PD +TYP + KA +
Sbjct: 71 -LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L + +G+ VHG ++ F D +VQN+LLAMYMN G+ E A+ VFD+MK + V+SWNTM
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I+GY+RN +AL +++ M++ V+ D AT+VS+LP CG LK++E+GR VH LV+EK
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ V+NA+++MY+KCG+M EA ++ + M+ DV+TWT +INGY +GD +AL LCR+
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M EGV+PN V++ASL+S CG +N GKCLH WA+RQ++ S++I+ET+LI MYAKC
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+L ++VF SK T PW+A+++G + N LV +A+ LFK+M +DV+P+ AT NSLLPA
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
YA LADL+QAMNIHCYL ++GF+ L+ A+ LV +YSKCG+L AH IFN I
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 488 XXX--XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
YG HG G A+ +F +MV+SGV PN+ITFTS L+ACSH+GLV+EGL+LF+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
FML+ ++ + +HYTCI+DLLGRAG+L++AYNLI T+P +P VWGALL ACV+HENV
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+LGE+AA FELEPENTGNYVLLAN+YAA+GRW+D E VR M+ VGLRK P S +E+
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Query: 666 RS 667
RS
Sbjct: 670 RS 671
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/598 (38%), Positives = 340/598 (56%), Gaps = 4/598 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + WN +M + G ++ LF +M+ SG+ + D++T+ + K+ S L
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEM-DSYTFSCVSKSFSSLR 209
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +HG K+GF V NSL+A Y+ + A+ VFD M E+ V+SWN++IN
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY N AE+ L V+ +M+ +G+E D AT+VSV C + + LGR VH++ + F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N +LDMY KCG + A + EM + VV++T++I GY G A A+ L M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
EG+ P++ +V ++L+ C + L+ GK +H W L ++ V AL+DMYAKC
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV-KDVQPDNATFNSLLPAY 428
+ VF + K WN ++ G+ N EA+ LF +L K PD T +LPA
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
A L+ + IH Y++R+G+ VA+ LVD+Y+KCG+L AH +F+ I
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA--SKDLVS 567
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG G+ A++LFNQM Q+G++ ++I+F S+L+ACSH+GLVDEG F M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ +I P V+HY CI+D+L R G L AY I MPI P+ +WGALL C H +V+L
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
E A FELEPENTG YVL+AN+YA +W + +R + GLRK P S +E++
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK 745
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 248/496 (50%), Gaps = 12/496 (2%)
Query: 73 TLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLD 132
T RS+ NT +R + + G +A+ L + SG D T +++ C+D L
Sbjct: 55 TTFDRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLK 111
Query: 133 MGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 192
G V GF +D+ + + L MY N G+ ++A VFD +K + + WN ++N
Sbjct: 112 DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELA 171
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
++ ++ ++ +MM +GVE D T V + L++V G ++H + + GF
Sbjct: 172 KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS 231
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
V N+++ Y+K ++ A + +EM E DV++W ++INGY+ NG A L + ML+ G
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
++ +L ++ S+ + C ++ G+ +H+ ++ E L+DMY+KC + +
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
VF + S + + ++++G+ L EA++LF++M + + PD T ++L A
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
L + +H ++ + + + V++ L+D+Y+KCGS+ A +F+ +
Sbjct: 412 LLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS--EMRVKDIISWNTI 469
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK-- 549
Y K+ + A+SLFN +++ P++ T VL AC+ D+G + ++++
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 550 ----QHQIIPLVDHYT 561
+H LVD Y
Sbjct: 530 YFSDRHVANSLVDMYA 545
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/601 (37%), Positives = 351/601 (58%), Gaps = 7/601 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + +RSL+ WNT+++ + + + L F M PDNFT P+ +KAC +L
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDE-EKPDNFTLPVALKACGELR 74
Query: 130 FLDMGVGVHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
++ G +HG K D +V +SL+ MY+ G +A +FD +++ +V+W++M+
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 189 NGYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+G+ +N +A+ + RM M + V PD T+++++ AC L N LGR VH V +GF
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++ + N++L+ Y K KEA L + E DV++W+T+I Y+ NG A AL++
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M+ +G +PN+ +V +L AC + L G+ H AIR+ LE+EV V TAL+DMY KC
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLP 426
+Y VF + +K W AL+SGF N + +I+ F ML+++ +PD +L
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
+ + L L+QA H Y+I+ GF + + LV++YS+CGSLG A +FN I L
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFK 545
YG HG G A+ FN MV+S V+PN++TF S+L ACSHAGL+ EGL +FK
Sbjct: 435 WTSLITG--YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFK 492
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
M+ +++ P ++HY ++DLLGR G L+ A + + MP P + G LLGAC H+N
Sbjct: 493 LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNG 552
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
E+ E A+ FELE + G Y+L++N+Y G W + E +R+ V G++K A+SL+E+
Sbjct: 553 EMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 612
Query: 666 R 666
R
Sbjct: 613 R 613
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 224/433 (51%), Gaps = 9/433 (2%)
Query: 168 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 227
A+ +F M ++++ WNT++ R + EE L ++ M +PD T+ L ACG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 228 LLKNVELGREVHALVKEKGFWG-NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 286
L+ V G +H VK+ G ++ V ++++ MY+KCG+M EA + +E+++ D+VTW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 287 TLINGYILNGDARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
++++G+ NG A+ R M++ V P+ V++ +L+SAC + G+C+H + IR
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 346 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 405
+ +++ + +L++ YAK + +F ++K W+ +++ ++ N EA+ +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 406 FKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 465
F M+ +P+ AT +L A A DL+Q H IR G ++V++ LVD+Y K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 466 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM-VQSGVQPNQITF 524
C S A+ +F+ IP + +G ++ F+ M +++ +P+ I
Sbjct: 312 CFSPEEAYAVFSRIP--RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQ-HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
VL +CS G +++ +++K P + +++L R G L +A + +
Sbjct: 370 VKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGI 427
Query: 584 PIKPNHAVWGALL 596
+K + VW +L+
Sbjct: 428 ALK-DTVVWTSLI 439
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/599 (36%), Positives = 349/599 (58%), Gaps = 5/599 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + +R+LFSWN ++ Y + G +A+ L+ M+ G PD +T+P +++ C +
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G VH + G++LD V N+L+ MY+ G+ + A+L+FD M + ++SWN MI+
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GYF N E L ++ M V+PD T+ SV+ AC LL + LGR++HA V GF
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ V N++ MY+ G +EA L + M+ D+V+WTT+I+GY N A+ R+M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+ VKP+ ++VA++LSAC + G L+ G LH AI+ +L S VIV LI+MY+KC C +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ +F +K W ++++G N+ EA+ +QM + +QP+ T + L A A
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACA 509
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
+ L IH +++R+G + + L+D+Y +CG + A FN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS---QKKDVTSW 566
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
Y + G G M V LF++MV+S V+P++ITF S+L CS + +V +GL F M +
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-E 625
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 609
+ + P + HY C++DLLGRAG+L +A+ I+ MP+ P+ AVWGALL AC H ++LGE
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 610 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
++A+ FEL+ ++ G Y+LL NLYA G+WR+ VR M+ GL S VEV+ +
Sbjct: 686 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 200/389 (51%), Gaps = 2/389 (0%)
Query: 93 GRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFV 152
G+ +A+ L M + + D + +++ C + G V+ + + L +
Sbjct: 73 GKLEEAMKLLNSMQELRVAV-DEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 153 QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAG 211
N+ LAM++ G A VF M E+ + SWN ++ GY + +EA+ +Y+RM+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 212 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 271
V+PD T VL CG + ++ G+EVH V G+ ++ V NA++ MYVKCG +K A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 272 WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG 331
L + M D+++W +I+GY NG L L M V P+L+++ S++SAC G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 332 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 391
G+ +HA+ I ++ V +L MY + K+F + +K W ++S
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
G+ +N L +AI ++ M V+PD T ++L A A L DL + +H I++ +
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIP 480
+ VA+ L+++YSKC + A IF+ IP
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIP 460
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/600 (37%), Positives = 343/600 (57%), Gaps = 5/600 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLT-LPDNFTYPIIIKACSDL 128
+F+ + + ++TM++ + ++ AL FV M + + + NFTY ++K C D
Sbjct: 91 VFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDE 148
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ L +G +HG+ K+GF LD F L MY + +A+ VFD M E+ +VSWNT++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY +N A AL + M + ++P T+VSVLPA L+ + +G+E+H GF
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ + A++DMY KCG ++ A L + M E +VV+W ++I+ Y+ N + + A+++ + M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
L EGVKP VSV L AC G L G+ +H ++ L+ V V +LI MY KC
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ + +F K + WNA++ GF N +A+ F QM + V+PD T+ S++ A
Sbjct: 389 DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
A L+ A IH ++RS + V + LVD+Y+KCG++ A IF++ +
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTT 506
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG G+ A+ LF +M + ++PN +TF SV+ ACSH+GLV+ GL F M
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ + I +DHY ++DLLGRAG+LN+A++ I MP+KP V+GA+LGAC H+NV
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
E AA FEL P++ G +VLLAN+Y A W VR + GLRK P S+VE+++E
Sbjct: 627 EKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 279/594 (46%), Gaps = 65/594 (10%)
Query: 112 LPDN-FTYP--IIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ 168
+P N + +P ++++ CS L L + + FK G + F Q L++++ G ++
Sbjct: 31 IPANVYEHPAALLLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE 87
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
A VF+ + + V ++TM+ G+ + + ++AL+ + RM VEP +L CG
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
+ +G+E+H L+ + GF ++ + +MY KC Q+ EA + + M E D+V+W T+
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
+ GY NG AR AL + + M E +KP+ +++ S+L A + ++ GK +H +A+R
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+S V + TAL+DMYAKC + ++F ++ WN+++ ++ N +EA+ +F++
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
ML + V+P + + L A A L DL++ IH + G + V + L+ +Y KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A +F L + ++G A++ F+QM V+P+ T+ SV+
Sbjct: 388 VDTAASMFG--KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 529 HACS------HA--------------------GLVDE---------GLSLFKFMLKQHQI 553
A + HA LVD +F M ++H
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-- 503
Query: 554 IPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELG-- 608
V + +ID G G A L M IKPN + +++ AC VE G
Sbjct: 504 ---VTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 609 ---EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN------VRDMVNVVG 653
+ ++ EL ++ G V +L GR +A + V+ VNV G
Sbjct: 561 CFYMMKENYSIELSMDHYGAMV---DLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 342/598 (57%), Gaps = 4/598 (0%)
Query: 70 LFDTLPQRS-LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+F+ RS ++ WN++M Y + HD L +F +++ + +PD+FT+P +IKA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+G +H + K+G+ D V +SL+ MY E + VFD M E+ V SWNT+I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ ++++ AE+AL ++ RM +G EP+ ++ + AC L +E G+E+H +KGF
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V +A++DMY KC ++ A + +M +V W ++I GY+ GD++S + + M
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
++EG +P+ ++ S+L AC +L +GK +H + IR + +++ V +LID+Y KC
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
NL+ VF KT K WN ++S +I +A++++ QM+ V+PD TF S+LPA
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ LA L++ IH + S + S L+D+YSKCG+ A IFN IP
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP--KKDVVS 478
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG A+ F++M + G++P+ +T +VL AC HAGL+DEGL F M
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VWGALLGACVSHENVEL 607
++ I P+++HY+C+ID+LGRAG+L +AY +I+ P ++A + L AC H L
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSL 598
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
G+ AR E P++ Y++L NLYA+ W A VR + +GLRK P S +E+
Sbjct: 599 GDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 344/624 (55%), Gaps = 36/624 (5%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
+ F +N+++R Y G ++A+ LF+ M++SG++ PD +T+P + AC+ G+ +
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
HG+ K G+ D FVQNSL+ Y GE + A+ VFD M E+ VVSW +MI GY R + A
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 198 EEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
++A+ ++ RM+ D V P+ T+V V+ AC L+++E G +V+A ++ G N ++ +A
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
++DMY+KC + A L +E +++ + + Y+ G R AL + +M+ GV+P+
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
+S+ S +S+C ++ +GK H + +R ES + ALIDMY KC+ + ++++F
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 377 KTSKKRTAPWNALLSGFIHN-------------------------------SLVREAIQL 405
+ S K WN++++G++ N SL EAI++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 406 FKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
F M ++ V D T S+ A L L A I+ Y+ ++G + + + LVD++S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 465 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 524
+CG A IFN L G+ E A+ LF+ M++ G++P+ + F
Sbjct: 517 RCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
L ACSH GLV +G +F MLK H + P HY C++DLLGRAG L +A LI MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
++PN +W +LL AC NVE+ AA L PE TG+YVLL+N+YA+ GRW D
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 645 VRDMVNVVGLRKLPAQSLVEVRSE 668
VR + GLRK P S +++R +
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQIRGK 718
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 214/447 (47%), Gaps = 37/447 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R++ SW +M+ Y + DA++LF M+ P++ T +I AC+ L
Sbjct: 191 VFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLE 250
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G V+ +G +++ + ++L+ MYM + A+ +FD + N M +
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 247
Y R EAL V+N MMD+GV PD +++S + +C L+N+ G+ H V GF
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL----- 302
W N+ NA++DMY+KC + A+ + + M VVTW +++ GY+ NG+ +A
Sbjct: 371 WDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 303 ---------------------------MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
+ C + EGV + V++ S+ SACG G+L+
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
K ++ + + ++ +V + T L+DM+++C + +F + + + W A +
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 396 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 455
AI+LF M+ + ++PD F L A + ++Q I +++ + +V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 456 A-SILVDIYSKCGSLGYAHHIFNIIPL 481
+VD+ + G L A + +P+
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 233/502 (46%), Gaps = 43/502 (8%)
Query: 119 PIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE 178
P +K C + L M H K G D D L+A G +E ++ +
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 179 Q----TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 234
T +N++I GY + EA+ ++ RMM++G+ PD T L AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 235 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 294
G ++H L+ + G+ ++ V+N+++ Y +CG++ A + +EM E +VV+WT++I GY
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 295 NGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
A+ A+ + R++ E V PN V++ ++SAC L G+ ++A+ +E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
+ +AL+DMY KCN +++ ++F + NA+ S ++ L REA+ +F M+
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
V+PD + S + + + L ++ + H Y++R+GF + + L+D+Y KC A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGH------------------------GEMAVSLF 509
IF+ + Y ++G G + SLF
Sbjct: 393 RIFD--RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 510 NQMV--------QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 561
+ + Q GV + +T S+ AC H G +D ++ + ++++ I V T
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGT 509
Query: 562 CIIDLLGRAGQLNDAYNLIRTM 583
++D+ R G A ++ ++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSL 531
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F+T+P++++ SWNT++ VQ +A+ +F M D T I AC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
LD+ ++ K G LD + +L+ M+ G+ E A +F+ + + V +W I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWG 249
AE A+ +++ M++ G++PD V L AC V+ G+E+ ++++K G
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 301
V M+D+ + G ++EA L +M E + V W +L+ + G+ A
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 344/624 (55%), Gaps = 36/624 (5%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
+ F +N+++R Y G ++A+ LF+ M++SG++ PD +T+P + AC+ G+ +
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
HG+ K G+ D FVQNSL+ Y GE + A+ VFD M E+ VVSW +MI GY R + A
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 198 EEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
++A+ ++ RM+ D V P+ T+V V+ AC L+++E G +V+A ++ G N ++ +A
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
++DMY+KC + A L +E +++ + + Y+ G R AL + +M+ GV+P+
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
+S+ S +S+C ++ +GK H + +R ES + ALIDMY KC+ + ++++F
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 377 KTSKKRTAPWNALLSGFIHN-------------------------------SLVREAIQL 405
+ S K WN++++G++ N SL EAI++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 406 FKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
F M ++ V D T S+ A L L A I+ Y+ ++G + + + LVD++S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 465 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 524
+CG A IFN L G+ E A+ LF+ M++ G++P+ + F
Sbjct: 517 RCGDPESAMSIFN--SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
L ACSH GLV +G +F MLK H + P HY C++DLLGRAG L +A LI MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
++PN +W +LL AC NVE+ AA L PE TG+YVLL+N+YA+ GRW D
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 645 VRDMVNVVGLRKLPAQSLVEVRSE 668
VR + GLRK P S +++R +
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQIRGK 718
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 214/447 (47%), Gaps = 37/447 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R++ SW +M+ Y + DA++LF M+ P++ T +I AC+ L
Sbjct: 191 VFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLE 250
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G V+ +G +++ + ++L+ MYM + A+ +FD + N M +
Sbjct: 251 DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMAS 310
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 247
Y R EAL V+N MMD+GV PD +++S + +C L+N+ G+ H V GF
Sbjct: 311 NYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL----- 302
W N+ NA++DMY+KC + A+ + + M VVTW +++ GY+ NG+ +A
Sbjct: 371 WDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 303 ---------------------------MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
+ C + EGV + V++ S+ SACG G+L+
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
K ++ + + ++ +V + T L+DM+++C + +F + + + W A +
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 396 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 455
AI+LF M+ + ++PD F L A + ++Q I +++ + +V
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 456 A-SILVDIYSKCGSLGYAHHIFNIIPL 481
+VD+ + G L A + +P+
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 233/502 (46%), Gaps = 43/502 (8%)
Query: 119 PIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE 178
P +K C + L M H K G D D L+A G +E ++ +
Sbjct: 36 PSSLKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 179 Q----TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 234
T +N++I GY + EA+ ++ RMM++G+ PD T L AC +
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 235 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 294
G ++H L+ + G+ ++ V+N+++ Y +CG++ A + +EM E +VV+WT++I GY
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 295 NGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
A+ A+ + R++ E V PN V++ ++SAC L G+ ++A+ +E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
+ +AL+DMY KCN +++ ++F + NA+ S ++ L REA+ +F M+
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
V+PD + S + + + L ++ + H Y++R+GF + + L+D+Y KC A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGH------------------------GEMAVSLF 509
IF+ + Y ++G G + SLF
Sbjct: 393 RIFD--RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 450
Query: 510 NQMV--------QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 561
+ + Q GV + +T S+ AC H G +D ++ + ++++ I V T
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGT 509
Query: 562 CIIDLLGRAGQLNDAYNLIRTM 583
++D+ R G A ++ ++
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSL 531
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F+T+P++++ SWNT++ VQ +A+ +F M D T I AC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
LD+ ++ K G LD + +L+ M+ G+ E A +F+ + + V +W I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWG 249
AE A+ +++ M++ G++PD V L AC V+ G+E+ ++++K G
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 301
V M+D+ + G ++EA L +M E + V W +L+ + G+ A
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/601 (33%), Positives = 343/601 (57%), Gaps = 9/601 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + + F WN M++ + G +A+ + M+ +G+ D FTYP +IK+ + +S
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK-ADTFTYPFVIKSVAGIS 144
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G +H M K GF D +V NSL+++YM G A+ VF+ M E+ +VSWN+MI+
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 248
GY +L ++ M+ G +PD + +S L AC + + ++G+E+H V+ +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
G+++V ++LDMY K G++ A + N M + ++V W +I Y NG A + + M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 309 LLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+ G++P++++ +LL A ++ G+ +H +A+R+ +++ETALIDMY +C
Sbjct: 325 SEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ +F + ++K WN++++ ++ N A++LF+++ + PD+ T S+LPA
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
YA L + IH Y+++S + + + LV +Y+ CG L A FN I L
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSW 500
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y HG G ++V LF++M+ S V PN+ TF S+L ACS +G+VDEG F+ M
Sbjct: 501 NSIIMA--YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+++ I P ++HY C++DL+GR G + A + MP P +WG+LL A +H+++ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
E AA F++E +NTG YVLL N+YA GRW D ++ ++ G+ + ++S VE +
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKG 678
Query: 668 E 668
+
Sbjct: 679 K 679
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 230/440 (52%), Gaps = 14/440 (3%)
Query: 167 EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 226
E A +FD M + WN MI G+ EA++ Y+RM+ AGV+ D T V+ +
Sbjct: 81 EDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 227 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 286
+ ++E G+++HA+V + GF ++ V N+++ +Y+K G +A + EM E D+V+W
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWN 200
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
++I+GY+ GD S+LML + ML G KP+ S S L AC S GK +H A+R
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 347 KLES-EVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
++E+ +V+V T+++DMY+K G +SY ++F ++ WN ++ + N V +A
Sbjct: 261 RIETGDVMVMTSILDMYSK--YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 404 QLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 462
F++M ++ +QPD T +LLPA A+L + IH Y +R GFL + + + L+D+
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 463 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 522
Y +CG L A IF+ + Y ++G A+ LF ++ S + P+
Sbjct: 375 YGECGQLKSAEVIFD--RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432
Query: 523 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 582
T S+L A + + + EG + +++K + ++ + G L DA
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII-LNSLVHMYAMCGDLEDARKCFNH 491
Query: 583 MPIKPNHAVWGALLGACVSH 602
+ +K + W +++ A H
Sbjct: 492 ILLK-DVVSWNSIIMAYAVH 510
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 20/365 (5%)
Query: 267 MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA 326
M++A L +EM++ D W +I G+ G A+ M+ GVK + + ++ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 327 CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPW 386
SL GK +HA I+ S+V V +LI +Y K C + KVF + ++ W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 387 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
N+++SG++ ++ LFK+ML +PD + S L A + + K IHC+ +R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 447 SGFLYRLEVASILV-----DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 501
S R+E ++V D+YSK G + YA IFN + Y ++G
Sbjct: 260 S----RIETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYARNGR 313
Query: 502 GEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 560
A F +M Q+G+QP+ IT ++L A + + EG ++ + +++ +P +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLE 368
Query: 561 TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH-ENVELGEVAAR-WTFEL 618
T +ID+ G GQL A + M K N W +++ A V + +N E+ W L
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 619 EPENT 623
P++T
Sbjct: 428 VPDST 432
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/634 (35%), Positives = 334/634 (52%), Gaps = 51/634 (8%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVH 138
++ WN+++R Y G + L LF ++HS PDN+T+P + KAC ++S + G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 139 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAE 198
++ GF + FV N+L+AMY A+ VFD M VVSWN++I Y + + +
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 199 EALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 257
AL +++RM + G PD T+V+VLP C L LG+++H NM V N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 258 LDMYVKCGQMKEA-------------WW----------------------LANEMDETDV 282
+DMY KCG M EA W + E + DV
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 283 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 342
VTW+ I+GY G AL +CR ML G+KPN V++ S+LS C S G+L +GK +H +
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 343 AIRQKLE-------SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR--TAPWNALLSGF 393
AI+ ++ E +V LIDMYAKC + + +F S K W ++ G+
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 394 IHNSLVREAIQLFKQMLVKDVQ--PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-L 450
+ +A++L +M +D Q P+ T + L A A LA L+ IH Y +R+
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
L V++ L+D+Y+KCGS+ A +F+ + YG HG+GE A+ +F+
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFD--NMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 570
+M + G + + +T VL+ACSH+G++D+G+ F M + P +HY C++DLLGRA
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 571 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 630
G+LN A LI MP++P VW A L C H VELGE AA EL + G+Y LL+
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 688
Query: 631 NLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
NLYA GRW+D +R ++ G++K P S VE
Sbjct: 689 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 216/463 (46%), Gaps = 54/463 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + SWN+++ Y ++G+P AL +F M + PDN T ++ C+ L
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+G +H + + FV N L+ MY G ++A VF M + VVSWN M+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 190 GYFRNNRAEEALRVYNR-----------------------------------MMDAGVEP 214
GY + R E+A+R++ + M+ +G++P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 215 DCATVVSVLPACGLLKNVELGREVHAL-------VKEKGFWGNMVVRNAMLDMYVKCGQM 267
+ T++SVL C + + G+E+H +++ G +V N ++DMY KC ++
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 268 KEAWWLANEMD--ETDVVTWTTLINGYILNGDARSALMLCRVMLLEG--VKPNLVSVASL 323
A + + + E DVVTWT +I GY +GDA AL L M E +PN +++
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 324 LSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR 382
L AC S +L GK +HA+A+R Q+ + V LIDMYAKC + + VF K
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 383 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 442
W +L++G+ + EA+ +F +M + D T +L A + + Q M
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME--- 600
Query: 443 YLIRSGFLYRL----EVASILVDIYSKCGSLGYAHHIFNIIPL 481
Y R ++ + E + LVD+ + G L A + +P+
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM 643
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 161/389 (41%), Gaps = 43/389 (11%)
Query: 257 MLDMYVKCGQMKEAWWLANEMDETD--VVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
++ Y+ G + A L +D V W +LI Y NG A L L +M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
P+ + + ACG S+ G+ HA ++ S V V AL+ MY++C + + KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 375 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLAD 433
F + S WN+++ + + A+++F +M + +PDN T ++LP A L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX------- 486
+HC+ + S + + V + LVD+Y+KCG + A+ +F+ + +
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 487 --------------------------XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 520
Y + G G A+ + QM+ SG++PN
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 521 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH------YTCIIDLLGRAGQLN 574
++T SVL C+ G + G + + +K + H +ID+ + +++
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 575 DAYNLIRTMPIKPNHAV-WGALLGACVSH 602
A + ++ K V W ++G H
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQH 453
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/596 (34%), Positives = 334/596 (56%), Gaps = 4/596 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R L SWN+++ Y G +AL ++ E+ +S + +PD+FT ++ A +L
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI-VPDSFTVSSVLPAFGNLL 221
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G G+HG K+G + V N L+AMY+ A+ VFD M + VS+NTMI
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 281
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + EE++R++ +D +PD TV SVL ACG L+++ L + ++ + + GF
Sbjct: 282 GYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 340
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
VRN ++D+Y KCG M A + N M+ D V+W ++I+GYI +GD A+ L ++M+
Sbjct: 341 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+ + + ++ L+S L +GK LH+ I+ + ++ V ALIDMYAKC
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 460
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
S K+F T WN ++S + +Q+ QM +V PD ATF LP A
Sbjct: 461 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
LA + IHC L+R G+ L++ + L+++YSKCG L + +F +
Sbjct: 521 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE--RMSRRDVVTW 578
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
YG +G GE A+ F M +SG+ P+ + F ++++ACSH+GLVDEGL+ F+ M
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 609
++I P+++HY C++DLL R+ +++ A I+ MPIKP+ ++W ++L AC + ++E E
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 610 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+R EL P++ G +L +N YAA+ +W +R + + K P S +EV
Sbjct: 699 RVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 265/514 (51%), Gaps = 6/514 (1%)
Query: 20 RKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTLPQRSL 79
R S+S++L+E +++HA + P +++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
+ WN+++R + + G +AL + ++ S ++ PD +T+P +IKAC+ L +MG V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVS-PDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 199
GF+ D FV N+L+ MY G +A+ VFD M + +VSWN++I+GY + EE
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 259
AL +Y+ + ++ + PD TV SVLPA G L V+ G+ +H + G +VV N ++
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 260 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI-LNGDARSALMLCRVMLLEGVKPNLV 318
MY+K + +A + +EMD D V++ T+I GY+ L S M L+ KP+L+
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN--LDQFKPDLL 308
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
+V+S+L ACG L+ K ++ + ++ E V LID+YAKC + VF
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
K T WN+++SG+I + + EA++LFK M++ + Q D+ T+ L+ LADLK
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 439 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 498
+H I+SG L V++ L+D+Y+KCG +G + IF+ + +
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS--SMGTGDTVTWNTVISACVR 486
Query: 499 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
G + + QM +S V P+ TF L C+
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 238/491 (48%), Gaps = 6/491 (1%)
Query: 119 PIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE 178
P I +A S S L+ +H + G D F L+ Y + E + VF +
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 179 -QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
+ V WN++I + +N EAL Y ++ ++ V PD T SV+ AC L + E+G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
V+ + + GF ++ V NA++DMY + G + A + +EM D+V+W +LI+GY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
AL + + + P+ +V+S+L A G+ + G+ LH +A++ + S V+V
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 417
L+ MY K + +VF + + + +N ++ G++ +V E++++F + L +PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPD 306
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
T +S+L A L DL A I+ Y++++GF+ V +IL+D+Y+KCG + A +FN
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 478 IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLV 537
+ Y + G A+ LF M+ Q + IT+ ++ + +
Sbjct: 367 --SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 538 DEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLG 597
G L +K I L +ID+ + G++ D+ + +M + W ++
Sbjct: 425 KFGKGLHSNGIKSGICIDL-SVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVIS 482
Query: 598 ACVSHENVELG 608
ACV + G
Sbjct: 483 ACVRFGDFATG 493
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 318 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 377
VS + A S +LN + +HA I L+S LID Y+ S VF +
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 378 TSK-KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
S K WN+++ F N L EA++ + ++ V PD TF S++ A A L D +
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
++ ++ GF L V + LVD+YS+ G L A +F+ +P+ Y
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGY 182
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
HG+ E A+ +++++ S + P+ T +SVL A + +V +G L F LK
Sbjct: 183 SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 327/602 (54%), Gaps = 7/602 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD LP++S +W TM+ V+MGR + +L LF +++ + +PD + ++ ACS L
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV-VPDGYILSTVLSACSILP 263
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
FL+ G +H + G ++D + N L+ Y+ G A +F+ M + ++SW T+++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +N +EA+ ++ M G++PD S+L +C L + G +VHA +
Sbjct: 324 GYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG---DARSALMLCR 306
+ V N+++DMY KC + +A + + DVV + +I GY G + AL + R
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M ++P+L++ SLL A S SL K +H + L ++ +ALID+Y+ C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
C S VF + K WN++ +G++ S EA+ LF ++ + +PD TF +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A LA ++ HC L++ G + + L+D+Y+KCGS AH F+
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD--SAASRDV 621
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
Y HG G+ A+ + +M+ G++PN ITF VL ACSHAGLV++GL F+
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFEL 681
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
ML+ I P +HY C++ LLGRAG+LN A LI MP KP VW +LL C NVE
Sbjct: 682 MLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
L E AA +P+++G++ +L+N+YA+ G W +A+ VR+ + V G+ K P +S + +
Sbjct: 741 LAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Query: 667 SE 668
E
Sbjct: 801 KE 802
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 170/618 (27%), Positives = 301/618 (48%), Gaps = 47/618 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P+R+L SW+TM+ G ++L +F+E + P+ + I+ACS L
Sbjct: 101 VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD 160
Query: 130 FLD--MGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
M + K+GFD D +V L+ Y+ G + A+LVFD + E++ V+W TM
Sbjct: 161 GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTM 220
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I+G + R+ +L+++ ++M+ V PD + +VL AC +L +E G+++HA + G
Sbjct: 221 ISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ + N ++D YVKCG++ A L N M ++++WTTL++GY N + A+ L
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M G+KP++ + +S+L++C S +L +G +HA+ I+ L ++ V +LIDMYAKC+C
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSL---VREAIQLFKQMLVKDVQPDNATFNSL 424
+ KVF + +NA++ G+ + EA+ +F+ M + ++P TF SL
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
L A A L L + IH + + G + S L+D+YS C L + +F+ +
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD--EMKVK 518
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
Y + E A++LF ++ S +P++ TF +++ A + V G
Sbjct: 519 DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Query: 545 KFMLKQH-QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP------------------- 584
+LK+ + P + + ++D+ + G DA+ +
Sbjct: 579 CQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 585 ---------------IKPNHAVWGALLGACVSHENVELG--EVAARWTFELEPENTGNYV 627
I+PN+ + +L AC VE G + F +EPE T +YV
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE-TEHYV 695
Query: 628 LLANLYAAVGRWRDAENV 645
+ +L GR A +
Sbjct: 696 CMVSLLGRAGRLNKAREL 713
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 231/485 (47%), Gaps = 27/485 (5%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
VHG G +LDT++ N L+ +Y AG A+ VF+ M E+ +VSW+TM++ +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 197 AEEALRVYNRMMDAGVE-PDCATVVSVLPACGLLKNVELGR----EVHALVKEKGFWGNM 251
EE+L V+ + P+ + S + AC L GR ++ + + + GF ++
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDV 183
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
V ++D Y+K G + A + + + E VTWTT+I+G + G + +L L ++ +
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
V P+ ++++LSAC L GK +HA +R LE + + LID Y KC +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
+K+F K W LLSG+ N+L +EA++LF M ++PD +S+L + A L
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
L +H Y I++ V + L+D+Y+KC L A +F+I
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 492 X-XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS------LF 544
G A+++F M ++P+ +TF S+L A A L GLS +F
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMF 481
Query: 545 KFMLKQHQIIPLVDHY--TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
K+ L +D + + +ID+ L D+ + M +K + +W ++ V
Sbjct: 482 KYGLN-------LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQ 533
Query: 603 -ENVE 606
EN E
Sbjct: 534 SENEE 538
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 321 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 380
A LL S L+Y +H I LE + + LI++Y++ + KVF K +
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE 107
Query: 381 KRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADLKQAM- 438
+ W+ ++S H+ + E++ +F + + P+ +S + A + L + M
Sbjct: 108 RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMV 167
Query: 439 -NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
+ +L++SGF + V ++L+D Y K G++ YA +F+ +P
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV-- 225
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
K G +++ LF Q+++ V P+ ++VL ACS ++ G + +L+ + +
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDA 284
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ID + G++ A+ L MP K N W LL
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLLSG 324
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 332/597 (55%), Gaps = 4/597 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + Q+ WN M+ Y + G + F M ++ P+ T+ ++ C+
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS-PNAVTFDCVLSVCASKL 253
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+D+GV +HG+ +G D + ++NSLL+MY G + A +F +M V+WN MI+
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY ++ EE+L + M+ +GV PD T S+LP+ +N+E +++H +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ + +A++D Y KC + A + ++ + DVV +T +I+GY+ NG +L + R ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+ PN +++ S+L G +L G+ LH + I++ ++ + A+IDMYAKC N
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
L+Y++F + SK+ WN++++ + AI +F+QM V + D + ++ L A A
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
L IH ++I+ + S L+D+Y+KCG+L A ++F +
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNIVSW 611
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
G HG + ++ LF++MV+ SG++P+QITF ++ +C H G VDEG+ F+ M
Sbjct: 612 NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMT 671
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ + I P +HY C++DL GRAG+L +AY +++MP P+ VWG LLGAC H+NVEL
Sbjct: 672 EDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA 731
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
EVA+ +L+P N+G YVL++N +A W VR ++ ++K+P S +E+
Sbjct: 732 EVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 274/530 (51%), Gaps = 7/530 (1%)
Query: 74 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 133
L + S+ WN+++ +V+ G + AL + +M+ G++ PD T+P ++KAC L
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS-PDVSTFPCLVKACVALKNFK- 155
Query: 134 GVGVHGMTFKA-GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 192
G+ T + G D + FV +SL+ Y+ G+ + +FD + ++ V WN M+NGY
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
+ + ++ ++ M + P+ T VL C ++LG ++H LV G
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
++N++L MY KCG+ +A L M D VTW +I+GY+ +G +L M+ G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
V P+ ++ +SLL + F +L Y K +H + +R + ++ + +ALID Y KC +++
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
+F + + + A++SG++HN L +++++F+ ++ + P+ T S+LP +L
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
LK +H ++I+ GF R + ++D+Y+KCG + A+ IF L
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE--RLSKRDIVSWNSM 513
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
+ + A+ +F QM SG+ + ++ ++ L AC++ G ++ FM+K H
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HS 572
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
+ V + +ID+ + G L A N+ +TM K N W +++ AC +H
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNH 621
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 240/496 (48%), Gaps = 8/496 (1%)
Query: 111 TLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQA 169
T+P + ++++ACS+ + L G VH D++ +L MY G +
Sbjct: 33 TIPRRLS--LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCG 90
Query: 170 QLVFDL-MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
++ + L ++ ++ WN++I+ + RN +AL Y +M+ GV PD +T ++ AC
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA 150
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
LKN + + V G N V ++++ Y++ G++ L + + + D V W +
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
+NGY G S + VM ++ + PN V+ +LS C S ++ G LH + +
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+ E ++ +L+ MY+KC + + K+F S+ T WN ++SG++ + L+ E++ F +
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M+ V PD TF+SLLP+ + +L+ IHCY++R + + S L+D Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A +IF+ Y +G ++ +F +V+ + PN+IT S+L
Sbjct: 391 VSMAQNIFS--QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 588
+ G L F++K+ + +ID+ + G++N AY + + K +
Sbjct: 449 PVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRD 506
Query: 589 HAVWGALLGACVSHEN 604
W +++ C +N
Sbjct: 507 IVSWNSMITRCAQSDN 522
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 155/351 (44%), Gaps = 28/351 (7%)
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC--- 365
LE P +S+ LL AC + L GK +HA+ I + + + ++ MYA C
Sbjct: 29 FLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 366 -NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
+CG + Y++ ++ S R PWN+++S F+ N L+ +A+ + +ML V PD +TF L
Sbjct: 87 SDCGKMFYRLDLRRSSIR--PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCL 144
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
+ A L + K + + G VAS L+ Y + G + +F+ +
Sbjct: 145 VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV--LQK 202
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
Y K G + + F+ M + PN +TF VL C+ L+D G+ L
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 545 KFMLKQHQIIPLVDHYTCI----IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
+ ++ VD I + + + G+ +DA L R M + + W ++
Sbjct: 263 GLV-----VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISG-- 314
Query: 601 SHENVELGEVAARWTFELEPENTG---NYVLLANLYAAVGRWRDAENVRDM 648
V+ G + TF E ++G + + ++L +V ++ + E + +
Sbjct: 315 ---YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 322/598 (53%), Gaps = 3/598 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + QR ++NT++ Q G A+ LF M GL PD+ T ++ ACS
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE-PDSNTLASLVVACSADG 403
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G +H T K GF + ++ +LL +Y + E A F + + VV WN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y + + R++ +M + P+ T S+L C L ++ELG ++H+ + + F
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N V + ++DMY K G++ AW + DVV+WTT+I GY AL R ML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G++ + V + + +SAC +L G+ +HA A S++ + AL+ +Y++C
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
SY F +T WNAL+SGF + EA+++F +M + + +N TF S + A +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
A++KQ +H + ++G+ EV + L+ +Y+KCGS+ A F + +
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF--LEVSTKNEVSW 761
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
Y KHG G A+ F+QM+ S V+PN +T VL ACSH GLVD+G++ F+ M
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 609
++ + P +HY C++D+L RAG L+ A I+ MPIKP+ VW LL ACV H+N+E+GE
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 610 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
AA ELEPE++ YVLL+NLYA +W + R + G++K P QS +EV++
Sbjct: 882 FAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 266/532 (50%), Gaps = 10/532 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R++F+WN M++ + LFV M+ +T P+ T+ +++AC S
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEACRGGS 200
Query: 130 F-LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
D+ +H G T V N L+ +Y G + A+ VFD ++ + SW MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+G +N EA+R++ M G+ P SVL AC ++++E+G ++H LV + GF
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V NA++ +Y G + A + + M + D VT+ TLING G A+ L + M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
L+G++P+ ++ASL+ AC + G+L G+ LHA+ + S +E AL+++YAKC
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ F++T + WN +L + +R + ++F+QM ++++ P+ T+ S+L
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
L DL+ IH +I++ F V S+L+D+Y+K G L A I +I
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAGKDVVS 558
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
Y ++ + A++ F QM+ G++ +++ T+ + AC+ + EG +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 549 KQ--HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+P + ++ L R G++ ++Y N A W AL+
Sbjct: 619 VSGFSSDLPFQN---ALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSG 666
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 258/533 (48%), Gaps = 5/533 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD L + SW M+ + +A+ LF +M G+ +P + + ++ AC +
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIE 302
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L++G +HG+ K GF DT+V N+L+++Y + G A+ +F M ++ V++NT+IN
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G + E+A+ ++ RM G+EPD T+ S++ AC + G+++HA + GF
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N + A+L++Y KC ++ A E + +VV W ++ Y L D R++ + R M
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+E + PN + S+L C G L G+ +H+ I+ + V + LIDMYAK +
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
++ + ++ + K W +++G+ + +A+ F+QML + ++ D + + A A
Sbjct: 543 TAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA 602
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
L LK+ IH SGF L + LV +YS+CG + ++ F
Sbjct: 603 GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE--QTEAGDNIAW 660
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
+ + G+ E A+ +F +M + G+ N TF S + A S + +G + + K
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
+ +I + + G ++DA + K N W A++ A H
Sbjct: 721 T-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 222/474 (46%), Gaps = 13/474 (2%)
Query: 113 PDNFTYPIIIKACSDLS-FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQL 171
P++ T +++ C + LD G +H K G D + + L Y+ G+ A
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 172 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC-GLLK 230
VFD M E+T+ +WN MI N E ++ RM+ V P+ T VL AC G
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
++ ++HA + +G + VV N ++D+Y + G + A + + + D +W +I+
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 350
G N A+ L M + G+ P + +S+LSAC SL G+ LH ++ S
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 351 EVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+ V AL+ +Y + GNL + +F S++ +N L++G +A++LFK+
Sbjct: 322 DTYVCNALVSLYF--HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M + ++PD+ T SL+ A + L + +H Y + GF ++ L+++Y+KC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A F + YG + +F QM + PNQ T+ S+L
Sbjct: 440 IETALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQLNDAYNLI 580
C G ++ G + ++K + ++ Y C +ID+ + G+L+ A++++
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTN---FQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/597 (34%), Positives = 316/597 (52%), Gaps = 7/597 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+ + W M+R Y + + L+ ++ G D+ + +KAC++L
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY-DDIVFSKALKACTELQ 156
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
LD G +H K D V LL MY GE + A VF+ + + VV W +MI
Sbjct: 157 DLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIA 215
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +N+ EE L ++NRM + V + T +++ AC L + G+ H + + G
Sbjct: 216 GYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIEL 275
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ + ++LDMYVKCG + A + NE D+V WT +I GY NG AL L + M
Sbjct: 276 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+KPN V++AS+LS CG +L G+ +H +I+ + + V AL+ MYAKC
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNR 394
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ VF S+K WN+++SGF N + EA+ LF +M + V P+ T SL A A
Sbjct: 395 DAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACA 454
Query: 430 VLADLKQAMNIHCYLIRSGFL--YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
L L ++H Y ++ GFL + V + L+D Y+KCG A IF+ I
Sbjct: 455 SLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE--EKNTI 512
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
YGK G ++ LF +M++ +PN+ TFTS+L AC H G+V+EG F M
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
K + P HYTC++D+L RAG+L A ++I MPI+P+ +GA L C H +L
Sbjct: 573 YKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDL 632
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
GE+ + +L P++ YVL++NLYA+ GRW A+ VR+++ GL K+ S +E
Sbjct: 633 GEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 234/481 (48%), Gaps = 11/481 (2%)
Query: 120 IIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ 179
+++ C+++ L HG+ G D + L+++Y G + A+LVFD + E
Sbjct: 49 LLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
W M+ Y N + E +++Y+ +M G D L AC L++++ G+++H
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 240 A-LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDA 298
LVK F + VV +LDMY KCG++K A + N++ +VV WT++I GY+ N
Sbjct: 166 CQLVKVPSF--DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
L+L M V N + +L+ AC +L+ GK H ++ +E + T+L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 359 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
+DMY KC + + +VF + S W A++ G+ HN V EA+ LF++M +++P+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 419 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 478
T S+L ++ +L+ ++H I+ G ++ VA+ LV +Y+KC A ++F +
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
+ ++G A+ LF++M V PN +T S+ AC+ G +
Sbjct: 403 ES--EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 539 EGLSLFKFMLKQHQIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLG 597
G SL + +K + H T ++D + G A + T+ K N W A++G
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIG 519
Query: 598 A 598
Sbjct: 520 G 520
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 336/600 (56%), Gaps = 17/600 (2%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLF-VEMIHSGLTLPDNFTYPIIIKACSDLS 129
FD + R +++WN M+ Y + G + + F + M+ SGLT PD T+P ++KAC +
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT-PDYRTFPSVLKACR--T 165
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+D G +H + K GF D +V SL+ +Y A+++FD M + + SWN MI+
Sbjct: 166 VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 190 GYFRNNRAEEALRVYN--RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
GY ++ A+EAL + N R MD+ TVVS+L AC + G +H+ + G
Sbjct: 225 GYCQSGNAKEALTLSNGLRAMDS------VTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ V N ++D+Y + G++++ + + M D+++W ++I Y LN A+ L +
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMYAKCN 366
M L ++P+ +++ SL S G + + + + +R+ ++ + A++ MYAK
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLL 425
+ + VF WN ++SG+ N EAI+++ M + ++ + T+ S+L
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
PA + L+Q M +H L+++G + V + L D+Y KCG L A +F IP
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP--RVN 516
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
+G HGHGE AV LF +M+ GV+P+ ITF ++L ACSH+GLVDEG F+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
M + I P + HY C++D+ GRAGQL A I++M ++P+ ++WGALL AC H NV
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+LG++A+ FE+EPE+ G +VLL+N+YA+ G+W + +R + + GLRK P S +EV
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/535 (28%), Positives = 256/535 (47%), Gaps = 59/535 (11%)
Query: 152 VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNR-MMDA 210
+ L+ +Y G A+ FD ++ + V +WN MI+GY R + E +R ++ M+ +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 270
G+ PD T SVL AC + V G ++H L + GF ++ V +++ +Y + + A
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 271 WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP-NLVSVASLLSACGS 329
L +EM D+ +W +I+GY +G+A+ AL L G++ + V+V SLLSAC
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACTE 259
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 389
G N G +H+++I+ LESE+ V LID+YA+ KVF + + WN++
Sbjct: 260 AGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSI 319
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG- 448
+ + N AI LF++M + +QPD T SL + L D++ ++ + +R G
Sbjct: 320 IKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
FL + + + +V +Y+K G + A +FN +P Y ++G A+ +
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLP--NTDVISWNTIISGYAQNGFASEAIEM 437
Query: 509 FNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
+N M + G + NQ T+ SVL ACS AG + +G+ L +LK + V T + D+
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD-VFVVTSLADMY 496
Query: 568 GRAGQLNDAYNLIRTMP----------------------------------IKPNHAVWG 593
G+ G+L DA +L +P +KP+H +
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 594 ALLGACVSHENVELGEVAARWTFELEPENTG------NYVLLANLYAAVGRWRDA 642
LL AC V+ G+ W FE+ + G +Y + ++Y G+ A
Sbjct: 557 TLLSACSHSGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 210/410 (51%), Gaps = 16/410 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P R + SWN M+ Y Q G +AL L +GL D+ T ++ AC++
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAG 261
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ GV +H + K G + + FV N L+ +Y G Q VFD M + ++SWN++I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG-FW 248
Y N + A+ ++ M + ++PDC T++S+ L ++ R V KG F
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++ + NA++ MY K G + A + N + TDV++W T+I+GY NG A A+ + +M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 309 LLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
EG + N + S+L AC G+L G LH ++ L +V V T+L DMY KC
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ +F + + + PWN L++ + +A+ LFK+ML + V+PD+ TF +LL A
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 428 --YAVLADLKQAMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYA 472
++ L D Q C+ + G L+ +VD+Y + G L A
Sbjct: 562 CSHSGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 607
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ LP + SWNT++ Y Q G +A+ ++ M G + T+ ++ ACS
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G+ +HG K G LD FV SL MY G E A +F + V WNT+I
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGFW 248
+ + E+A+ ++ M+D GV+PD T V++L AC V+ G+ +++ + G
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
++ M+DMY + GQ++ A M + D W L++ ++G+
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 12/356 (3%)
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
N++ + +HA + N+ + ++++Y G + A + + DV W +I+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 291 GYILNGDARSALMLC--RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
GY G++ S ++ C ML G+ P+ + S+L AC + G +H A++
Sbjct: 126 GYGRAGNS-SEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF 181
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+V V +LI +Y++ + +F + + WNA++SG+ + +EA+ L
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
+ D+ T SLL A D + + IH Y I+ G L V++ L+D+Y++ G
Sbjct: 242 LRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
L +F+ + Y + A+SLF +M S +QP+ +T S+
Sbjct: 298 LRDCQKVFD--RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
S G + S+ F L++ + + ++ + + G ++ A + +P
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 332 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN--LSYKVFMKTSKKRTAPWNAL 389
+L KCLHA + K V + L+++Y C GN L+ F + WN +
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLY--CYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 390 LSGFIHNSLVREAIQLFKQ-MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
+SG+ E I+ F ML + PD TF S+L A + D IHC ++ G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
F++ + VA+ L+ +YS+ ++G A +F+ +P+ Y + G+ + A++L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPV--RDMGSWNAMISGYCQSGNAKEALTL 238
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
N + + +T S+L AC+ AG + G+++ + +K H + + +IDL
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYA 293
Query: 569 RAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
G+L D + M ++ + W +++ A
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 320/602 (53%), Gaps = 8/602 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM--IHSGLTLPDNFTYPIIIKACSD 127
+FD + +R SWN++ Y Q G ++ +F M H + ++ T ++
Sbjct: 200 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV---NSTTVSTLLSVLGH 256
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
+ G G+HG+ K GFD V N+LL MY AG +A LVF M + ++SWN++
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+ + + R+ +AL + M+ +G + T S L AC E GR +H LV G
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ N ++ NA++ MY K G+M E+ + +M DVV W LI GY + D AL +
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSL-NYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M +EGV N ++V S+LSAC G L GK LHA+ + ES+ V+ +LI MYAKC
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ S +F + WNA+L+ H+ E ++L +M V D +F+ L
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A A LA L++ +H ++ GF + + + D+YSKCG +G + + P
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV--VKMLPPSVNRSL 614
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
G+HG+ E + F++M++ G++P +TF S+L ACSH GLVD+GL+ +
Sbjct: 615 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 674
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
+ + + P ++H C+IDLLGR+G+L +A I MP+KPN VW +LL +C H N++
Sbjct: 675 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 734
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
G AA +LEPE+ YVL +N++A GRW D ENVR + ++K A S V+++
Sbjct: 735 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 794
Query: 667 SE 668
+
Sbjct: 795 DK 796
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/613 (26%), Positives = 289/613 (47%), Gaps = 43/613 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P R++ SW ++M Y G P + ++++ M G+ +N + ++I +C L
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNEN-SMSLVISSCGLLK 157
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+G + G K+G + V+NSL++M + G + A +FD M E+ +SWN++
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y +N EE+ R+++ M E + TV ++L G + + + GR +H LV + GF
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V N +L MY G+ EA + +M D+++W +L+ ++ +G + AL L M+
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G N V+ S L+AC + G+ LH + L I+ AL+ MY K +
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
S +V ++ ++ WNAL+ G+ + +A+ F+ M V+ V + T S+L A
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 430 VLAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ D L++ +H Y++ +GF V + L+ +Y+KCG L + +FN L
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN--GLDNRNIIT 515
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
HGHGE + L ++M GV +Q +F+ L A + +++EG L +
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 549 K---QHQ-----------------------IIPLVDH----YTCIIDLLGRAGQLND--- 575
K +H + P V+ + +I LGR G +
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 576 AYNLIRTMPIKPNHAVWGALLGACVSHENVELG----EVAARWTFELEPENTGNYVLLAN 631
++ + M IKP H + +LL AC V+ G ++ AR F LEP + + + +
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR-DFGLEPA-IEHCICVID 693
Query: 632 LYAAVGRWRDAEN 644
L GR +AE
Sbjct: 694 LLGRSGRLAEAET 706
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 245/536 (45%), Gaps = 9/536 (1%)
Query: 74 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DLSFLD 132
+P R+ SWNTMM V++G + + F +M G+ P +F ++ AC S
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK-PSSFVIASLVTACGRSGSMFR 59
Query: 133 MGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 192
GV VHG K+G D +V ++L +Y G ++ VF+ M ++ VVSW +++ GY
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
EE + +Y M GV + ++ V+ +CGLLK+ LGR++ V + G +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
V N+++ M G + A ++ ++M E D ++W ++ Y NG + + +M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
+ N +V++LLS G +G+ +H ++ +S V V L+ MYA +
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
VF + K WN+L++ F+++ +A+ L M+ + TF S L A
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
++ +H ++ SG Y + + LV +Y K G + + + +P
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVVAWNAL 417
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG-LVDEGLSLFKFMLKQH 551
Y + + A++ F M GV N IT SVL AC G L++ G L +++
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 552 QIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
+H +I + + G L+ + +L + + N W A+L A H + E
Sbjct: 478 --FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 530
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 320/602 (53%), Gaps = 8/602 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM--IHSGLTLPDNFTYPIIIKACSD 127
+FD + +R SWN++ Y Q G ++ +F M H + ++ T ++
Sbjct: 217 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV---NSTTVSTLLSVLGH 273
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
+ G G+HG+ K GFD V N+LL MY AG +A LVF M + ++SWN++
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+ + + R+ +AL + M+ +G + T S L AC E GR +H LV G
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 393
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ N ++ NA++ MY K G+M E+ + +M DVV W LI GY + D AL +
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 453
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSL-NYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M +EGV N ++V S+LSAC G L GK LHA+ + ES+ V+ +LI MYAKC
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ S +F + WNA+L+ H+ E ++L +M V D +F+ L
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A A LA L++ +H ++ GF + + + D+YSKCG +G + + P
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV--VKMLPPSVNRSL 631
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
G+HG+ E + F++M++ G++P +TF S+L ACSH GLVD+GL+ +
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
+ + + P ++H C+IDLLGR+G+L +A I MP+KPN VW +LL +C H N++
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
G AA +LEPE+ YVL +N++A GRW D ENVR + ++K A S V+++
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811
Query: 667 SE 668
+
Sbjct: 812 DK 813
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 248/540 (45%), Gaps = 9/540 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 128
LFD +P R+ SWNTMM V++G + + F +M G+ P +F ++ AC
Sbjct: 14 LFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK-PSSFVIASLVTACGRSG 72
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
S GV VHG K+G D +V ++L +Y G ++ VF+ M ++ VVSW +++
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY EE + +Y M GV + ++ V+ +CGLLK+ LGR++ V + G
Sbjct: 133 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 192
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V N+++ M G + A ++ ++M E D ++W ++ Y NG + + +M
Sbjct: 193 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ N +V++LLS G +G+ +H ++ +S V V L+ MYA
Sbjct: 253 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ VF + K WN+L++ F+++ +A+ L M+ + TF S L A
Sbjct: 313 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 372
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
++ +H ++ SG Y + + LV +Y K G + + + +P
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP--RRDVVA 430
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG-LVDEGLSLFKFM 547
Y + + A++ F M GV N IT SVL AC G L++ G L ++
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI 490
Query: 548 LKQHQIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
+ +H +I + + G L+ + +L + + N W A+L A H + E
Sbjct: 491 VSAG--FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 237/484 (48%), Gaps = 19/484 (3%)
Query: 159 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
MY G + A+ +FD+M + VSWNTM++G R E + + +M D G++P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 219 VVSVLPACGLLKNV-ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
+ S++ ACG ++ G +VH V + G ++ V A+L +Y G + + + EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+ +VV+WT+L+ GY G+ + + + M EGV N S++ ++S+CG + G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK--VFMKTSKKRTAPWNALLSGFIH 395
+ ++ LES++ VE +LI M + GN+ Y +F + S++ T WN++ + +
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLG--SMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 396 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 455
N + E+ ++F M + ++ T ++LL + K IH +++ GF + V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 456 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 515
+ L+ +Y+ G A+ +F +P + G A+ L M+ S
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 516 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFM----LKQHQIIPLVDHYTCIIDLLGRAG 571
G N +TFTS L AC ++G L + L +QII ++ + G+ G
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG-----NALVSMYGKIG 411
Query: 572 QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLAN 631
+++++ ++ MP + + W AL+G E+ + +AA T +E ++ NY+ + +
Sbjct: 412 EMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSS-NYITVVS 468
Query: 632 LYAA 635
+ +A
Sbjct: 469 VLSA 472
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 328/601 (54%), Gaps = 12/601 (1%)
Query: 70 LFDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
LFD ++ WN+++ Y G+ + L LF EM +G P+++T + AC
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG-PAPNSYTIVSALTACDGF 297
Query: 129 SFLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
S+ +G +H K+ + +V N+L+AMY G+ QA+ + M VV+WN++
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I GY +N +EAL ++ M+ AG + D ++ S++ A G L N+ G E+HA V + G+
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 248 WGNMVVRNAMLDMYVKCG---QMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
N+ V N ++DMY KC M A+ M + D+++WTT+I GY N AL L
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFL---RMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
R + + ++ + + + S+L A S+ K +H +R+ L + +++ L+D+Y K
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGK 533
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C + +VF K W +++S N EA++LF++M+ + D+ +
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
L A A L+ L + IHCYL+R GF +A +VD+Y+ CG L A +F+ I
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE--RK 651
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
YG HG G+ AV LF++M V P+ I+F ++L+ACSHAGL+DEG
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 604
K M ++++ P +HY C++D+LGRA + +A+ ++ M +P VW ALL AC SH
Sbjct: 712 KIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSE 771
Query: 605 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
E+GE+AA+ ELEP+N GN VL++N++A GRW D E VR + G+ K P S +E
Sbjct: 772 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Query: 665 V 665
+
Sbjct: 832 M 832
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 286/565 (50%), Gaps = 39/565 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R+ F+WNTM+ YV G P AL L+ M G+ L + ++P ++KAC+ L
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS-SFPALLKACAKLR 196
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ-TVVSWNTMI 188
+ G +H + K G+ F+ N+L++MY + A+ +FD +E+ V WN+++
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-KEKGF 247
+ Y + ++ E L ++ M G P+ T+VS L AC +LG+E+HA V K
Sbjct: 257 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ V NA++ MY +CG+M +A + +M+ DVVTW +LI GY+ N + AL
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M+ G K + VS+ S+++A G +L G LHA+ I+ +S + V LIDMY+KCN
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ F++ K W +++G+ N EA++LF+ + K ++ D S+L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+VL + IHC+++R G L + + + LVD+Y KC ++GYA +F I
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 555
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+G+ AV LF +MV++G+ + + +L A + +++G + ++
Sbjct: 556 TSMISSSAL--NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 548 LKQ------HQIIPLVDHYTC---------IIDLLGRAGQLN-----DAYNL-------- 579
L++ + +VD Y C + D + R G L +AY +
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 580 -----IRTMPIKPNHAVWGALLGAC 599
+R + P+H + ALL AC
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYAC 698
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 204/420 (48%), Gaps = 7/420 (1%)
Query: 117 TYPIIIKACSDLSFLDMGVGVHGMTFKA--GFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 174
+ +++ C + G +H FK F+LD F+ L+ MY G + A+ VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 175 LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 234
M ++T +WNTMI Y N AL +Y M GV ++ ++L AC L+++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 235 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYI 293
G E+H+L+ + G+ + NA++ MY K + A L + E D V W ++++ Y
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 294 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEV 352
+G + L L R M + G PN ++ S L+AC F GK +HA ++ SE+
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
V ALI MY +C + ++ + + WN+L+ G++ N + +EA++ F M+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
+ D + S++ A L++L M +H Y+I+ G+ L+V + L+D+YSKC Y
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
F + + Y ++ A+ LF + + ++ +++ S+L A S
Sbjct: 441 GRAF--LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 326/597 (54%), Gaps = 7/597 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R L +W+T++ ++ G AL +F M+ G+ PD T +++ C++L
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE-PDAVTMISVVEGCAELG 216
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L + VHG + FDLD + NSLL MY G+ ++ +F+ + ++ VSW MI+
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y R +E+ALR ++ M+ +G+EP+ T+ SVL +CGL+ + G+ VH +
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 250 NM-VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N + A++++Y +CG++ + + + + ++V W +LI+ Y G AL L R M
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ + +KP+ ++AS +SAC + G + GK +H IR + E V+ +LIDMY+K
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSV 455
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ + VF + + WN++L GF N EAI LF M ++ + TF +++ A
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ + L++ +H LI SG L L + L+D+Y+KCG L A +F +
Sbjct: 516 SSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFR--AMSSRSIVS 572
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG A+S FNQMV+SG +PN++ F +VL AC H+G V+EG F M
Sbjct: 573 WSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM- 631
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
K + P +H+ C IDLL R+G L +AY I+ MP + +VWG+L+ C H+ +++
Sbjct: 632 KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDII 691
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+ ++ ++TG Y LL+N+YA G W + +R + L+K+P S +E+
Sbjct: 692 KAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 306/620 (49%), Gaps = 50/620 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 128
+F+ P F + +++ V A++L+ ++ S T F +P +++AC+
Sbjct: 56 VFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV-SETTQISKFVFPSVLRACAGSR 114
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L +G VHG K G D D ++ SLL MY G A+ VFD M + +V+W+T++
Sbjct: 115 EHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLV 174
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ N +ALR++ M+D GVEPD T++SV+ C L + + R VH + K F
Sbjct: 175 SSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 234
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ + N++L MY KCG + + + ++ + + V+WT +I+ Y + AL M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV-IVETALIDMYAKCNC 367
+ G++PNLV++ S+LS+CG G + GK +H +A+R++L+ + AL+++YA+C
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ V S + WN+L+S + H +V +A+ LF+QM+ + ++PD T S + A
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+ IH ++IR+ V + L+D+YSK GS+ A +FN I
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIK--HRSVV 471
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+ ++G+ A+SLF+ M S ++ N++TF +V+ ACS G +++G K++
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG----KWV 527
Query: 548 LKQHQIIPLVDHY--TCIIDLLGRAGQLNDAYNLIRTMP--------------------- 584
+ I L D + T +ID+ + G LN A + R M
Sbjct: 528 HHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIG 587
Query: 585 -------------IKPNHAVWGALLGACVSHENVELGEVAARW--TFELEPENTGNYVLL 629
KPN V+ +L AC +VE G+ +F + P N+ ++
Sbjct: 588 SAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSP-NSEHFACF 646
Query: 630 ANLYAAVGRWRDA-ENVRDM 648
+L + G ++A +++M
Sbjct: 647 IDLLSRSGDLKEAYRTIKEM 666
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 337/612 (55%), Gaps = 21/612 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R+ SWN+++ + AL F M+ + P +FT ++ ACS+L
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE-PSSFTLVSVVTACSNLP 213
Query: 130 F---LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
L MG VH + G +L++F+ N+L+AMY G+ ++++ + +V+WNT
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
+++ +N + EAL M+ GVEPD T+ SVLPAC L+ + G+E+HA + G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 247 FWG-NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
N V +A++DMY C Q+ + + M + + W +I GY N + AL+L
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 306 RVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
M G+ N ++A ++ AC G+ + + +H + +++ L+ + V+ L+DMY++
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM--LVKDV-------- 414
+++ ++F K + WN +++G++ + +A+ L +M L + V
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 415 -QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
+P++ T ++LP+ A L+ L + IH Y I++ + V S LVD+Y+KCG L +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 533
+F+ IP YG HG+G+ A+ L M+ GV+PN++TF SV ACSH
Sbjct: 573 KVFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 534 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VW 592
+G+VDEGL +F M + + P DHY C++DLLGRAG++ +AY L+ MP N A W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690
Query: 593 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
+LLGA H N+E+GE+AA+ +LEP +YVLLAN+Y++ G W A VR +
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ 750
Query: 653 GLRKLPAQSLVE 664
G+RK P S +E
Sbjct: 751 GVRKEPGCSWIE 762
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 171/630 (27%), Positives = 297/630 (47%), Gaps = 66/630 (10%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
RS W ++R V+ +A+ +V+MI G+ PDN+ +P ++KA +DL +++G
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIK-PDNYAFPALLKAVADLQDMELGKQ 118
Query: 137 VHGMTFKAGFDLDTF-VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 195
+H +K G+ +D+ V N+L+ +Y G+ VFD + E+ VSWN++I+
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE---LGREVHALVKEKGFWGNMV 252
+ E AL + M+D VEP T+VSV+ AC L E +G++VHA KG + +
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI 238
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
+ N ++ MY K G++ + L D+VTW T+++ N AL R M+LEG
Sbjct: 239 I-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNL- 370
V+P+ +++S+L AC L GK LHA+A++ L+ V +AL+DMY CNC +
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY--CNCKQVL 355
Query: 371 -SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPAY 428
+VF ++ WNA+++G+ N +EA+ LF M + ++ T ++PA
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ IH ++++ G V + L+D+YS+ G + A IF +
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG--KMEDRDLVT 473
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQM------VQSG-----VQPNQITFTSVLHACSHAGLV 537
Y H E A+ L ++M V G ++PN IT ++L +C+ +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 538 DEGLSLFKFMLKQHQII------PLVDHYT------------------------CIIDLL 567
+G + + +K + LVD Y II
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 568 GRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE--- 621
G G +A +L+R M +KPN + ++ AC V+ G R + ++P+
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG---LRIFYVMKPDYGV 650
Query: 622 --NTGNYVLLANLYAAVGRWRDAENVRDMV 649
++ +Y + +L GR ++A + +M+
Sbjct: 651 EPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/607 (33%), Positives = 323/607 (53%), Gaps = 17/607 (2%)
Query: 70 LFDTLP---QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 126
+F+T+ +R + SW+ MM Y GR DA+ +FVE + GL +P+++ Y +I+ACS
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL-VPNDYCYTAVIRACS 177
Query: 127 DLSFLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEK--EQAQLVFDLMKEQTVVS 183
+ F+ +G G K G F+ D V SL+ M++ GE E A VFD M E VV+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVT 236
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
W MI + EA+R + M+ +G E D T+ SV AC L+N+ LG+++H+
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 244 EKGFWGNMVVRNAMLDMYVKC---GQMKEAWWLANEMDETDVVTWTTLINGYILNGD-AR 299
G + V +++DMY KC G + + + + M++ V++WT LI GY+ N + A
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 300 SALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
A+ L M+ +G V+PN + +S ACG+ GK + A ++ L S V ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 359 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
I M+ K + + + F S+K +N L G N +A +L ++ +++
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 419 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 478
TF SLL A + +++ IH +++ G V + L+ +YSKCGS+ A +FN
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
+ + KHG + FNQM++ GV+PN++T+ ++L ACSH GLV
Sbjct: 535 --MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
EG F M + H+I P ++HY C++DLL RAG L DA+ I TMP + + VW LGA
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 599 CVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLP 658
C H N ELG++AAR EL+P Y+ L+N+YA G+W ++ +R + L K
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Query: 659 AQSLVEV 665
S +EV
Sbjct: 713 GCSWIEV 719
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 260/556 (46%), Gaps = 58/556 (10%)
Query: 105 MIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAG 164
M G+ D+ T+ ++K+C +G VH + + D+ + NSL+++Y +G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 165 EKEQAQLVFDLMK---EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS 221
+ +A+ VF+ M+ ++ VVSW+ M+ Y N R +A++V+ ++ G+ P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 222 VLPACGLLKNVELGREVHALVKEKG-FWGNMVVRNAMLDMYVKC-GQMKEAWWLANEMDE 279
V+ AC V +GR + + G F ++ V +++DM+VK + A+ + ++M E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 280 TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCL 339
+VVTWT +I + G R A+ M+L G + + +++S+ SAC +L+ GK L
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 340 HAWAIRQKLESEVIVETALIDMYAKCNCG---NLSYKVFMKTSKKRTAPWNALLSGFIHN 396
H+WAIR L + VE +L+DMYAKC+ + KVF + W AL++G++ N
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 397 -SLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+L EAI LF +M+ + V+P++ TF+S A L+D + + + G
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 455 VASILVDIYSKCGSLGYAHHIF-----------NIIPLXXXXXXXXXXXXXXYGKHGHGE 503
VA+ ++ ++ K + A F N + E
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 504 MAVSLF----------------------NQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
+ VS F +Q+V+ G+ NQ +++ S G +D
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAG---QLNDAYNLIRTMPIKPNHAVWGALLGA 598
+F FM ++ I +T +I + G ++ + +N + +KPN + A+L A
Sbjct: 530 RVFNFMENRNVI-----SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 599 CVSHENVELGEVAARW 614
C SH +G V+ W
Sbjct: 585 C-SH----VGLVSEGW 595
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 169/388 (43%), Gaps = 21/388 (5%)
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
LI ++ GD R A+ +M +G++P + V+ +SLL +C GK +HA I
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVF---MKTSKKRTAPWNALLSGFIHNSLVREAI 403
+E + ++ +LI +Y+K + VF + K+ W+A+++ + +N +AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLYRLEVASILVDI 462
++F + L + P++ + +++ A + + +L+++G F + V L+D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 463 YSKC-GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 521
+ K S A+ +F+ + + G A+ F MV SG + ++
Sbjct: 212 FVKGENSFENAYKVFD--KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC-IIDLLGRA---GQLNDAY 577
T +SV AC+ E LSL K + LVD C ++D+ + G ++D
Sbjct: 270 FTLSSVFSACAEL----ENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCR 325
Query: 578 NLIRTMPIKPNHAV--WGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 635
+ M +H+V W AL+ + + N+ + + N+ ++ + A
Sbjct: 326 KVFDRM---EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 636 VGRWRDAENVRDMVNVVGLRKLPAQSLV 663
G D + ++ R L + S V
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSV 410
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 318/597 (53%), Gaps = 6/597 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F ++ + +F +N +MR + PH +L++F + S P++ TY I A S
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G +HG G D + + ++++ MY E A+ VFD M E+ + WNTMI+
Sbjct: 134 DDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193
Query: 190 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY +N E+++V+ ++ ++ D T++ +LPA L+ + LG ++H+L + G +
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V + +Y KCG++K L E + D+V + +I+GY NG+ +L L + +
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+L G + ++ SL+ G L Y +H + ++ S V TAL +Y+K N
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHL-MLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ K+F ++ +K WNA++SG+ N L +AI LF++M + P+ T +L A
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
A L L +H + + F + V++ L+ +Y+KCGS+ A +F++ +
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL--MTKKNEVT 488
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG G+ A+++F +M+ SG+ P +TF VL+ACSHAGLV EG +F M+
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
++ P V HY C++D+LGRAG L A I M I+P +VW LLGAC H++ L
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+ FEL+P+N G +VLL+N+++A + A VR L K P +L+E+
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 292/532 (54%), Gaps = 5/532 (0%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+H G F+ L+ + G+ A+ VFD + + WN +I GY RNN
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
++AL +Y+ M A V PD T +L AC L ++++GR VHA V GF ++ V+N
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG 159
Query: 257 MLDMYVKCGQMKEAWWLAN--EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
++ +Y KC ++ A + + E +V+WT +++ Y NG+ AL + M VK
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK 219
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
P+ V++ S+L+A L G+ +HA ++ LE E + +L MYAKC + +
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 279
Query: 375 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL 434
F K WNA++SG+ N REAI +F +M+ KDV+PD + S + A A + L
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 435 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXX 494
+QA +++ Y+ RS + + ++S L+D+++KCGS+ A +F+
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--RTLDRDVVVWSAMIV 397
Query: 495 XYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 554
YG HG A+SL+ M + GV PN +TF +L AC+H+G+V EG F M H+I
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKIN 456
Query: 555 PLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 614
P HY C+IDLLGRAG L+ AY +I+ MP++P VWGALL AC H +VELGE AA+
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 615 TFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
F ++P NTG+YV L+NLYAA W VR + GL K S VEVR
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 229/425 (53%), Gaps = 25/425 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD LP+ +F WN ++R Y + DAL ++ M + ++ PD+FT+P ++KACS LS
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-PDSFTFPHLLKACSGLS 133
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD--LMKEQTVVSWNTM 187
L MG VH F+ GFD D FVQN L+A+Y A+ VF+ + E+T+VSW +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
++ Y +N EAL ++++M V+PD +VSVL A L++++ GR +HA V + G
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL 253
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ ++ MY KCGQ+ A L ++M +++ W +I+GY NG AR A+ +
Sbjct: 254 EIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M+ + V+P+ +S+ S +SAC GSL + ++ + R +V + +ALIDM+AKC
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ VF +T + W+A++ G+ + REAI L++ M V P++ TF LL A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 428 YAVLADLKQAMNIHCYLIRSG--FLYRLEVASI---------LVDIYSKCGSLGYAHHIF 476
H ++R G F R+ I ++D+ + G L A+ +
Sbjct: 434 CN-----------HSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 477 NIIPL 481
+P+
Sbjct: 483 KCMPV 487
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 163/321 (50%), Gaps = 4/321 (1%)
Query: 74 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 133
LP+R++ SW ++ Y Q G P +AL +F +M + PD ++ A + L L
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK-PDWVALVSVLNAFTCLQDLKQ 240
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G +H K G +++ + SL MY G+ A+++FD MK ++ WN MI+GY +
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
N A EA+ +++ M++ V PD ++ S + AC + ++E R ++ V + ++ +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
+A++DM+ KCG ++ A + + + DVV W+ +I GY L+G AR A+ L R M GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
PN V+ LL AC G + G K+ + +ID+ + + +Y+
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 374 VF--MKTSKKRTAPWNALLSG 392
V M T W ALLS
Sbjct: 481 VIKCMPVQPGVTV-WGALLSA 500
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 131/263 (49%), Gaps = 8/263 (3%)
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFI 394
K +HA + L+ + T LI +A + G++++ +VF + + PWNA++ G+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLI--HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
N+ ++A+ ++ M + V PD+ TF LL A + L+ L+ +H + R GF +
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
V + L+ +Y+KC LG A +F +PL Y ++G A+ +F+QM +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH-QIIPLVDHYTCIIDLLGRAGQL 573
V+P+ + SVL+A + + +G S+ ++K +I P D + + + GQ+
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP--DLLISLNTMYAKCGQV 273
Query: 574 NDAYNLIRTMPIKPNHAVWGALL 596
A L M PN +W A++
Sbjct: 274 ATAKILFDKMK-SPNLILWNAMI 295
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 348 bits (892), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 318/599 (53%), Gaps = 71/599 (11%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV--------------- 181
VH K+GF + F+QN L+ Y G E + VFD M ++ +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 182 ----------------VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPA 225
+WN+M++G+ +++R EEAL + M G + + SVL A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 226 CGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTW 285
C L ++ G +VH+L+ + F ++ + +A++DMY KCG + +A + +EM + +VV+W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 286 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
+LI + NG A AL + ++ML V+P+ V++AS++SAC S ++ G+ +H ++
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 346 -QKLESEVIVETALIDMYAKCN-------------------------------CGNLSYK 373
KL +++I+ A +DMYAKC+ +
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
+F K +++ WNAL++G+ N EA+ LF + + V P + +F ++L A A LA+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 434 LKQAMNIHCYLIRSGFLYR------LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
L M H ++++ GF ++ + V + L+D+Y KCG + + +F +
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR--KMMERDCV 459
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+ ++G+G A+ LF +M++SG +P+ IT VL AC HAG V+EG F M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+ + PL DHYTC++DLLGRAG L +A ++I MP++P+ +WG+LL AC H N+ L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
G+ A E+EP N+G YVLL+N+YA +G+W D NVR + G+ K P S ++++
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 228/451 (50%), Gaps = 40/451 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF ++P+R +WN+M+ + Q R +AL F M G L + +++ ++ ACS L+
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL-NEYSFASVLSACSGLN 166
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
++ GV VH + K+ F D ++ ++L+ MY G AQ VFD M ++ VVSWN++I
Sbjct: 167 DMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLIT 226
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 248
+ +N A EAL V+ M+++ VEPD T+ SV+ AC L +++G+EVH +VK
Sbjct: 227 CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLAN-------------------------------EM 277
++++ NA +DMY KC ++KEA ++ + +M
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
E +VV+W LI GY NG+ AL L ++ E V P S A++L AC L+ G
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 338 CLHAWAIRQKL------ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 391
H ++ E ++ V +LIDMY KC C Y VF K ++ WNA++
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMII 466
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFL 450
GF N EA++LF++ML +PD+ T +L A +++ + + R G
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ + +VD+ + G L A + +P+
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 186/430 (43%), Gaps = 73/430 (16%)
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK--------------------------- 268
R VHA V + GF + ++N ++D Y KCG ++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 269 ----EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
EA L M E D TW ++++G+ + AL +M EG N S AS+L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 384
SAC +N G +H+ + S+V + +AL+DMY+KC N + +VF + +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
WN+L++ F N EA+ +F+ ML V+PD T S++ A A L+ +K +H +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 445 IRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX----------- 492
+++ L + +++ VD+Y+KC + A IF+ +P+
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 493 ------------------XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 534
Y ++G E A+SLF + + V P +F ++L AC+
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 535 GLVDEGLSL--------FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 586
+ G+ FKF + I + + +ID+ + G + + Y + R M ++
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS---LIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 587 PNHAVWGALL 596
+ W A++
Sbjct: 456 RDCVSWNAMI 465
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 128/230 (55%), Gaps = 13/230 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + +R++ SWN ++ Y Q G +AL+LF ++ P ++++ I+KAC+DL+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLA 400
Query: 130 FLDMGVGV------HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 183
L +G+ HG F++G + D FV NSL+ MY+ G E+ LVF M E+ VS
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
WN MI G+ +N EAL ++ M+++G +PD T++ VL ACG VE GR H
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFSS 518
Query: 244 EKGFWGNMVVRN---AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 289
+G +R+ M+D+ + G ++EA + EM + D V W +L+
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 34/298 (11%)
Query: 321 ASLLSAC-GSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 379
A LL +C S S Y + +HA I+ +E+ ++ LID Y+KC +VF K
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 380 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-----------VQPDNA--------- 419
++ WN++++G + EA LF+ M +D Q D
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 420 -----------TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
+F S+L A + L D+ + + +H + +S FL + + S LVD+YSKCG+
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A +F+ + + ++G A+ +F M++S V+P+++T SV+
Sbjct: 203 VNDAQRVFD--EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 586
AC+ + G + ++K ++ + +D+ + ++ +A + +MPI+
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 319/600 (53%), Gaps = 11/600 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R++ S+N+++ Y QMG A+ LF+E + L L D FTY + C +
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKL-DKFTYAGALGFCGERC 162
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
LD+G +HG+ G F+ N L+ MY G+ +QA +FD E+ VSWN++I+
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN---VELGREVHALVKEKG 246
GY R AEE L + +M G+ + SVL AC + N +E G +H + G
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY-----ILNGDARSA 301
++VVR A+LDMY K G +KEA L + M +VVT+ +I+G+ I + + A
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L M G++P+ + + +L AC + +L YG+ +HA + +S+ + +ALI++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
YA + F TSK+ A W +++ + N + A LF+Q+ ++P+ T
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV 462
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ ++ A A A L I Y I+SG V + + +Y+K G++ A+ +F I +
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF--IEV 520
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
+HG A+++F M G++PNQ F VL AC H GLV +GL
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 601
F+ M ++I P H+TC++DLLGR G+L+DA NLI + + + W ALL +C
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 602 HENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
+++ +G+ A ELEPE +G+YVLL N+Y G AE VR+++ G++K PA S
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 150/579 (25%), Positives = 264/579 (45%), Gaps = 47/579 (8%)
Query: 111 TLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ 170
T D+ Y I+ + + + +G HG K+ + ++ N+LL MY E A+
Sbjct: 43 TALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFAR 102
Query: 171 LVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 230
+FD M E+ ++S+N++I+GY + E+A+ ++ +A ++ D T L CG
Sbjct: 103 QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERC 162
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
+++LG +H LV G + + N ++DMY KCG++ +A L + DE D V+W +LI+
Sbjct: 163 DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLIS 222
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG---SFGSLNYGKCLHAWAIRQK 347
GY+ G A L L M +G+ ++ S+L AC + G + G +H + +
Sbjct: 223 GYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG 282
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF-----IHNSLVREA 402
+E +++V TAL+DMYAK + K+F K +NA++SGF I + EA
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 462
+LF M + ++P +TF+ +L A + L+ IH + ++ F + S L+++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 463 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 522
Y+ GS F + ++ E A LF Q+ S ++P +
Sbjct: 403 YALMGSTEDGMQCF--ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 523 TFTSVLHACSHAGLVDEGLSLFKFMLKQ-------------------------HQII--- 554
T + ++ AC+ + G + + +K +Q+
Sbjct: 461 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 555 --PLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE 609
P V Y+ +I L + G N+A N+ +M IKPN + +L AC V G
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 610 V---AARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 645
+ + + P N ++ L +L GR DAEN+
Sbjct: 581 KYFQCMKNDYRINP-NEKHFTCLVDLLGRTGRLSDAENL 618
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/600 (32%), Positives = 315/600 (52%), Gaps = 6/600 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG-LTLPDNFTYPIIIKACSDL 128
LFD +P R++ +W +M Y + +A LF +M S TLPD+ T+ ++ C+D
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 129 SFLDMGVGVHGMTFKAGFDLDTF--VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
+ VH K GFD + F V N LL Y + A ++F+ + E+ V++NT
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
+I GY ++ E++ ++ +M +G +P T VL A L + LG+++HAL G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
F + V N +LD Y K ++ E L +EM E D V++ +I+ Y ++L R
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M G A++LS + SL G+ LH A+ +S + V +L+DMYAKC
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ +F ++ T W AL+SG++ L ++LF +M +++ D +TF ++L
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLK 460
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A A A L +H ++IRSG L + S LVD+Y+KCGS+ A +F +P
Sbjct: 461 ASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP--DRNA 518
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
+ +G GE A+ F +M++SG+QP+ ++ VL ACSH G V++G F+
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA 578
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
M + I P HY C++DLLGR G+ +A L+ MP +P+ +W ++L AC H+N
Sbjct: 579 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS 638
Query: 607 LGEVAARWTFELEP-ENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
L E AA F +E + YV ++N+YAA G W +V+ + G++K+PA S VEV
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 218/481 (45%), Gaps = 12/481 (2%)
Query: 149 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 208
+T N++++ ++ G+ A+ +FD M ++TVV+W ++ Y RN+ +EA +++ +M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 209 DAG--VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN--MVVRNAMLDMYVKC 264
+ PD T ++LP C +VHA + GF N + V N +L Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
++ A L E+ E D VT+ TLI GY +G ++ L M G +P+ + + +L
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 384
A G+ LHA ++ + V ++D Y+K + + +F + +
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
+N ++S + ++ F++M N F ++L A L+ L+ +HC
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 445 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX-XXXXXXXXXYGKHGHGE 503
+ + L V + LVD+Y+KC A IF +P G HG G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436
Query: 504 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
+ LF +M S ++ +Q TF +VL A + + G L F+++ + + + +
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGL 493
Query: 564 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE--LGEVAARWTFELEPE 621
+D+ + G + DA + MP + N W AL+ A + + E +G A L+P+
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 622 N 622
+
Sbjct: 553 S 553
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 323/598 (54%), Gaps = 5/598 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ L +++ WN M+R Y G H + LF++M SG + D+FT+ ++ C+
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI-DDFTFTSLLSTCAASH 442
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+MG H + K + FV N+L+ MY G E A+ +F+ M ++ V+WNT+I
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y ++ EA ++ RM G+ D A + S L AC + + G++VH L + G
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ ++++DMY KCG +K+A + + + E VV+ LI GY N + A++L + ML
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEML 621
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE-VIVETALIDMYAKCNCG 368
GV P+ ++ A+++ AC SL G H ++ SE + +L+ MY
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 681
Query: 369 NLSYKVFMK-TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ +F + +S K W ++SG N EA++ +K+M V PD ATF ++L
Sbjct: 682 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRV 741
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+VL+ L++ IH + ++ L+D+Y+KCG + + +F+ +
Sbjct: 742 CSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR-RRSNVV 800
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y K+G+ E A+ +F+ M QS + P++ITF VL ACSHAG V +G +F+ M
Sbjct: 801 SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+ Q+ I VDH C++DLLGR G L +A + I +KP+ +W +LLGAC H +
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
GE++A ELEP+N+ YVLL+N+YA+ G W A +R ++ G++K+P S ++V
Sbjct: 921 GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDV 978
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 241/527 (45%), Gaps = 71/527 (13%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD L ++ + +WN+M+ MY +G+P L FV + + + P+ FT+ I++ C+ +
Sbjct: 118 FDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI-FPNKFTFSIVLSTCARETN 175
Query: 131 LDMGVGVHGMTFKAGF-------------------------------DLDTFVQNSLLAM 159
++ G +H K G D +T L +
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 160 YMNAGEKEQAQLVFDLMKEQ-----------------------------------TVVSW 184
Y+ AG E+A LVF+ M+++ VV+W
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 244
N MI+G+ + A+ + M + V+ +T+ SVL A G++ N++LG VHA +
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
G N+ V ++++ MY KC +M+ A + ++E + V W +I GY NG++ + L
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMEL 415
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
M G + + SLLS C + L G H+ I++KL + V AL+DMYAK
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C + ++F + + WN ++ ++ + EA LFK+M + + D A S
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAST 535
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
L A + L Q +HC ++ G L S L+D+YSKCG + A +F+ +P
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EW 593
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
Y ++ + E AV LF +M+ GV P++ITF +++ AC
Sbjct: 594 SVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 200/474 (42%), Gaps = 40/474 (8%)
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
L +G VH + G D + + N+++ +Y + A+ FD + E+ V +WN+M++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
Y + + LR + + + + P+ T VL C NVE GR++H + + G N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
A++DMY KC ++ +A + + + + V WT L +GY+ G A+++ M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
EG +P+ ++ ++++ G L + L
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLL------------------------------- 283
Query: 371 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
F + S WN ++SG AI+ F M V+ +T S+L A +
Sbjct: 284 ----FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
+A+L + +H I+ G + V S LV +YSKC + A +F L
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE--ALEEKNDVFWN 397
Query: 491 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 550
Y +G + LF M SG + TFTS+L C+ + ++ G ++K+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 551 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 604
L ++D+ + G L DA + M + N W ++G+ V EN
Sbjct: 458 KLAKNLFVG-NALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDEN 509
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 332 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 391
+L GK +H+ ++ ++SE + A++D+YAKC + + K F K TA WN++LS
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTA-WNSMLS 133
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
+ + ++ F + + P+ TF+ +L A +++ IHC +I+ G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 511
LVD+Y+KC + A +F I Y K G E AV +F +
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWI--VDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 512 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 571
M G +P+ + F +V++ G + + LF M P V + +I G+ G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRG 306
Query: 572 QLNDAYNL---IRTMPIKPNHAVWGALLGACVSHENVELGEV 610
A +R +K + G++L A N++LG V
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 192/597 (32%), Positives = 325/597 (54%), Gaps = 11/597 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +P S+ SW M+ Y + AL +F EM HSG+ + +N T +I AC S
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI-NNCTVTSVISACGRPS 365
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF---DLMKEQTVVSWNT 186
+ VH FK+GF LD+ V +L++MY +G+ + ++ VF D ++ Q +V N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
MI + ++ + +A+R++ RM+ G+ D +V S+L +L + LG++VH + G
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
++ V +++ +Y KCG ++E++ L + D W ++I+G+ G R A+ L
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
ML +G P+ ++A++L+ C S SL GK +H + +R ++ + + +AL++MY+KC
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
L+ +V+ + + ++L+SG+ + L+++ LF+ M++ D+ +S+L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A A+ + +H Y+ + G V S L+ +YSK GS+ F+ I
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI--NGPDL 718
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
Y +HG A+ ++N M + G +P+++TF VL ACSH GLV+E
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
M+K + I P HY C++D LGR+G+L +A + I M IKP+ VWG LL AC H VE
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
LG+VAA+ ELEP + G Y+ L+N+ A VG W + E R ++ G++K P S V
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 249/516 (48%), Gaps = 9/516 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFDT+PQ + S N M+ Y Q ++L F +M G + +Y +I ACS L
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFE-ANEISYGSVISACSALQ 164
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
V T K G+ V+++L+ ++ E A VF V WNT+I
Sbjct: 165 APLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIA 224
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G RN +++ M +PD T SVL AC L+ + G+ V A V + G
Sbjct: 225 GALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AE 283
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ V A++D+Y KCG M EA + + + VV+WT +++GY + DA SAL + + M
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
GV+ N +V S++SACG + +HAW + + V ALI MY+K +
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 370 LSYKVFMKTSK-KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
LS +VF +R N +++ F + +AI+LF +ML + ++ D + SLL
Sbjct: 404 LSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL--- 460
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+VL L +H Y ++SG + L V S L +YSKCGSL ++ +F IP
Sbjct: 461 SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF--KDNAC 518
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
+ ++G+ A+ LF++M+ G P++ T +VL CS + G + + L
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
+ I +D + ++++ + G L A + +P
Sbjct: 579 RA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 225/451 (49%), Gaps = 7/451 (1%)
Query: 148 LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM 207
D F+ SLL+ Y N+G A +FD + + VVS N MI+GY ++ EE+LR +++M
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 208 MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM 267
G E + + SV+ AC L+ V + G++ VV +A++D++ K +
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 268 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC 327
++A+ + + +V W T+I G + N + + L M + KP+ + +S+L+AC
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 328 GSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWN 387
S L +GK + A I+ E +V V TA++D+YAKC + +VF + W
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 388 ALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 447
+LSG+ ++ A+++FK+M V+ +N T S++ A + + +A +H ++ +S
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 448 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 507
GF VA+ L+ +YSK G + + +F + + + A+
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD-DIQRQNIVNVMITSFSQSKKPGKAIR 439
Query: 508 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
LF +M+Q G++ ++ + S+L S ++ G + + LK ++ L + + L
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVG-SSLFTLY 495
Query: 568 GRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ G L ++Y L + +P K N A W +++
Sbjct: 496 SKCGSLEESYKLFQGIPFKDN-ACWASMISG 525
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 333 LNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 391
L K L A +R+ L +V + +L+ Y+ + K+F + N ++S
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
G+ + L E+++ F +M + + ++ S++ A + L + + C+ I+ G+ +
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 511
V S L+D++SK A+ +F L +G + LF++
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFR-DSLSANVYCWNTIIAGALRNQNYGAV-FDLFHE 241
Query: 512 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGR 569
M +P+ T++SVL AC+ E L K + + D + C I+DL +
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAK 297
Query: 570 AGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
G + +A + +P P+ W +L
Sbjct: 298 CGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 193/604 (31%), Positives = 328/604 (54%), Gaps = 11/604 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R+L S+ +++ Y Q G+ +A+ L+++M+ L +PD F + IIKAC+ S
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL-VPDQFAFGSIIKACASSS 182
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G +H K QN+L+AMY+ + A VF + + ++SW+++I
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 190 GYFRNNRAEEALRVYNRMMDAGV-EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G+ + EAL M+ GV P+ S L AC L + G ++H L +
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA 302
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
GN + ++ DMY +CG + A + ++++ D +W +I G NG A A+ + M
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN-- 366
G P+ +S+ SLL A +L+ G +H++ I+ +++ V +L+ MY C+
Sbjct: 363 RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL 422
Query: 367 --CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C NL ++ F + + WN +L+ + + E ++LFK MLV + +PD+ T +L
Sbjct: 423 YCCFNL-FEDFRNNAD--SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
L ++ LK +HCY +++G + + L+D+Y+KCGSLG A IF+ +
Sbjct: 480 LRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFD--SMDNR 537
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
Y + G GE A+ LF +M +G++PN +TF VL ACSH GLV+EGL L+
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 604
M +H I P +H +C++DLL RAG+LN+A I M ++P+ VW LL AC + N
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGN 657
Query: 605 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
V L + AA +++P N+ +VLL +++A+ G W +A +R + ++K+P QS +E
Sbjct: 658 VHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIE 717
Query: 665 VRSE 668
+ +
Sbjct: 718 IEDK 721
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 253/568 (44%), Gaps = 39/568 (6%)
Query: 117 TYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 176
TY +I ACS L G +H + DT + N +L+MY G A+ VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 177 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 236
E+ +VS+ ++I GY +N + EA+R+Y +M+ + PD S++ AC +V LG+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
++HA V + +++ +NA++ MYV+ QM +A + + D+++W+++I G+ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 297 DARSALMLCRVMLLEGV-KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
AL + ML GV PN S L AC S +YG +H I+ +L I
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
+L DMYA+C N + +VF + + TA WN +++G +N EA+ +F QM
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
PD + SLL A L Q M IH Y+I+ GFL L V + L+ +Y+ C L ++
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
F EM + LF M+ S +P+ IT ++L C
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEM-LRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP----------- 584
+ G + + LK + P +ID+ + G L A + +M
Sbjct: 488 SLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 585 -----------------------IKPNHAVWGALLGACVSHENVELG-EVAARWTFELEP 620
I+PNH + +L AC VE G ++ A E
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 621 ENTGNYV-LLANLYAAVGRWRDAENVRD 647
T + + +L A GR +AE D
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFID 634
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 5/286 (1%)
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
K L + SL+ AC S SL G+ +H + + + I+ ++ MY KC + +
Sbjct: 64 KIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDARE 123
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
VF ++ + ++++G+ N EAI+L+ +ML +D+ PD F S++ A A +D
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD 183
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 493
+ +H +I+ L + L+ +Y + + A +F IP+
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM--KDLISWSSII 241
Query: 494 XXYGKHGHGEMAVSLFNQMVQSGV-QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
+ + G A+S +M+ GV PN+ F S L ACS D G + +K
Sbjct: 242 AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL 301
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ + + D+ R G LN A + + +P+ A W ++
Sbjct: 302 AGNAIAGCS-LCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAG 345
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 327/605 (54%), Gaps = 16/605 (2%)
Query: 70 LFDTLPQRSL--FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+FD +P + +W+ M+R Y AL+L+ +M++SG+ P +TYP ++KAC+
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR-PTKYTYPFVLKACAG 115
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L +D G +H + F D +V +L+ Y GE E A VFD M ++ +V+WN M
Sbjct: 116 LRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAM 175
Query: 188 INGYFRNNRAEEALRVY--NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
I+G+ + + + ++ R +D G+ P+ +T+V + PA G + G+ VH
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRID-GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
GF ++VV+ +LD+Y K + A + + + + VTW+ +I GY+ N + A +
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 306 RVMLLEG----VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
ML+ V P V++ +L C FG L+ G+C+H +A++ ++ V+ +I
Sbjct: 295 FQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
YAK +++ F + K +N+L++G + N E+ +LF +M ++PD T
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+L A + LA L + H Y + G+ + + L+D+Y+KCG L A +F+ +
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD--TM 470
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
+G HG G+ A+SLFN M ++GV P+++T ++L ACSH+GLVDEG
Sbjct: 471 HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Query: 542 SLFKFMLK-QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
LF M + +IP +DHY C+ DLL RAG L++AY+ + MP +P+ V G LL AC
Sbjct: 531 QLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACW 590
Query: 601 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQ 660
+++N ELG ++ L E T + VLL+N Y+A RW DA +R + GL K P
Sbjct: 591 TYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGY 649
Query: 661 SLVEV 665
S V+V
Sbjct: 650 SWVDV 654
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 245/486 (50%), Gaps = 18/486 (3%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDT-FVQNSLLAMYMNAGEKEQAQLVFDLMKEQ 179
+++ C L +G +H K L + V +L +Y + E E A+ VFD +
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 180 TV--VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
+ ++W+ MI Y N+ AE+AL +Y +M+++GV P T VL AC L+ ++ G+
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
+H+ V F +M V A++D Y KCG+++ A + +EM + D+V W +I+G+ L+
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 298 ARSALMLCRVM-LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
+ L M ++G+ PNL ++ + A G G+L GK +H + R ++++V+T
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--- 413
++D+YAK C + +VF KK W+A++ G++ N +++EA ++F QMLV D
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA 304
Query: 414 -VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
V P +L A DL +HCY +++GF+ L V + ++ Y+K GSL A
Sbjct: 305 MVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
F+ I L + E + LF++M SG++P+ T VL ACS
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVV--NCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQLNDAYNLIRTMPIKPNHA 590
H + G S + + V+ C ++D+ + G+L+ A + TM K +
Sbjct: 421 HLAALGHGSSCHGYCVVHGYA---VNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIV 476
Query: 591 VWGALL 596
W +L
Sbjct: 477 SWNTML 482
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 313/605 (51%), Gaps = 10/605 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMG---RPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 126
+F+ + + + SWN+++ Y Q G + + LF EM + LP+ +T I KA S
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI-LPNAYTLAGIFKAES 129
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
L +G H + K D +V SL+ MY AG E VF M E+ +W+T
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 187 MINGYFRNNRAEEALRVYN---RMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
M++GY R EEA++V+N R + G + D +VL + V LGR++H +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+ G G + + NA++ MY KC + EA + + + + +TW+ ++ GY NG++ A+
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 363
L M G+KP+ ++ +L+AC L GK LH++ ++ E + TAL+DMYA
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 364 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
K C + K F ++ A W +L+SG++ NS EA+ L+++M + P++ T S
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
+L A + LA L+ +H + I+ GF + + S L +YSKCGSL + +F P
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
+ +G G+ A+ LF +M+ G++P+ +TF +++ ACSH G V+ G
Sbjct: 489 VVSWNAMISGLSH--NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 544 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 603
F M Q + P VDHY C++DLL RAGQL +A I + I +W LL AC +H
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 604 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
ELG A L + YV L+ +Y A+GR RD E V + G+ K S +
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Query: 664 EVRSE 668
E++++
Sbjct: 667 ELKNQ 671
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 228/475 (48%), Gaps = 12/475 (2%)
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G VHG + G N L+ Y G+ +A +F+ + + VVSWN++I GY +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 194 N---NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
N + + ++++ M + P+ T+ + A L++ +GR+ HALV + +G+
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
+ V +++ MY K G +++ + M E + TW+T+++GY G A+ + + L
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 311 ---EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
EG + V A +LS+ + + G+ +H I+ L V + AL+ MY+KC
Sbjct: 213 EKEEGSDSDYVFTA-VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
N + K+F + + + W+A+++G+ N EA++LF +M ++P T +L A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+ + L++ +H +L++ GF L + LVD+Y+K G L A F+ L
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC--LQERDVA 389
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y ++ E A+ L+ +M +G+ PN T SVL ACS ++ G +
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
+K H V + + + + G L D + R P K + W A++ +SH
Sbjct: 450 IK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISG-LSH 501
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 221/497 (44%), Gaps = 65/497 (13%)
Query: 214 PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 273
P +T++ L +N+ GR VH + G + N +++ Y KCG++ +A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 274 ANEMDETDVVTWTTLINGYILNGDARSA---LMLCRVMLLEGVKPNLVSVASLLSACGSF 330
N + DVV+W +LI GY NG S+ + L R M + + PN ++A + A S
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 331 GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL 390
S G+ HA ++ ++ V+T+L+ MY K KVF ++ T W+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 391 SGFIHNSLVREAIQLFKQMLVKDVQPDNA--TFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
SG+ V EAI++F L + + ++ F ++L + A + IHC I++G
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
L + +++ LV +YSKC SL A +F+ Y ++G AV L
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY---TCIID 565
F++M +G++P++ T VL+ACS ++EG L F+LK + H T ++D
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK----LGFERHLFATTALVD 365
Query: 566 LLGRAGQLNDA----------------------------------YNLIRTMPIKPNHAV 591
+ +AG L DA Y ++T I PN
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 592 WGALLGACVSHENVELGEVAARWT----FELE-PENTGNYVLLANLYAAVGRWRDAENVR 646
++L AC S +ELG+ T F LE P + L+ +Y+ G D
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA----LSTMYSKCGSLEDG---- 477
Query: 647 DMVNVVGLRKLPAQSLV 663
N+V R+ P + +V
Sbjct: 478 ---NLV-FRRTPNKDVV 490
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 13/236 (5%)
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
++ P +T L ++ +L +H +IR+G ++ A++LV+ Y+KCG L A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 473 HHIFN-IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
H IFN II G + LF +M + PN T + A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 532 SHAGLVDEGLSLFKFMLKQHQIIPL-VDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA 590
S G ++K + VD T ++ + +AG + D + MP + N
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVD--TSLVGMYCKAGLVEDGLKVFAYMP-ERNTY 185
Query: 591 VWGALLGACVSHENVELG-EVAARWTFELEPENTGNYV-------LLANLYAAVGR 638
W ++ + VE +V + E E + +YV L A +Y +GR
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 311/602 (51%), Gaps = 8/602 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIH---SGLTLPDNFTYPIIIKACS 126
LFD +P+R+L SWN+M+R++ G ++ L EM+ G +PD T ++ C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
+ +G GVHG K D + + N+L+ MY G AQ++F + + VVSWNT
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 187 MINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLPACGLLKNVELGREVHALVKE 244
M+ G+ V +M+ G V+ D T+++ +P C + +E+H +
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
+ F N +V NA + Y KCG + A + + + V +W LI G+ + D R +L
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
M + G+ P+ +V SLLSAC SL GK +H + IR LE ++ V +++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C +F K WN +++G++ N A+ +F+QM++ +Q + +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
A ++L L+ H Y ++ +A L+D+Y+K GS+ + +FN L
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN--GLKEK 661
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
YG HG + A+ LF +M ++G P+ +TF VL AC+H+GL+ EGL
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI-RTMPIKPNHAVWGALLGACVSHE 603
M + P + HY C+ID+LGRAGQL+ A ++ M + + +W +LL +C H+
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781
Query: 604 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
N+E+GE A FELEPE NYVLL+NLYA +G+W D VR +N + LRK S +
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 841
Query: 664 EV 665
E+
Sbjct: 842 EL 843
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 264/535 (49%), Gaps = 14/535 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD L ++LF WN ++ Y + + L F+EMI + LPD+FTYP +IKAC+ +S
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G+ VHG+ K G D FV N+L++ Y G A +FD+M E+ +VSWN+MI
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 190 GYFRNNRAEEALRVYNRMM----DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
+ N +EE+ + MM D PD AT+V+VLP C + + LG+ VH +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
+V+ NA++DMY KCG + A + + +VV+W T++ G+ GD +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 306 RVMLL--EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 363
R ML E VK + V++ + + C L K LH ++++Q+ +V A + YA
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA 441
Query: 364 KCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
K CG+LSY +VF K WNAL+ G ++ R ++ QM + + PD+ T
Sbjct: 442 K--CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
SLL A + L L+ +H ++IR+ L V ++ +Y CG L +F+ +
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD--AM 557
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
Y ++G + A+ +F QMV G+Q I+ V ACS + G
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ LK H + +ID+ + G + + + + K A W A++
Sbjct: 618 EAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMI 670
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 211/438 (48%), Gaps = 10/438 (2%)
Query: 120 IIIKACSDLSFLDMGVGVHGM-TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE 178
++++A ++MG +H + + D + ++ MY G + ++ VFD ++
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 179 QTVVSWNTMINGYFRNNRAEEALRVYNRMMD-AGVEPDCATVVSVLPACGLLKNVELGRE 237
+ + WN +I+ Y RN +E L + M+ + PD T V+ AC + +V +G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
VH LV + G ++ V NA++ Y G + +A L + M E ++V+W ++I + NG
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 298 ARSALMLCRVMLLE----GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
+ + +L M+ E P++ ++ ++L C + GK +H WA++ +L+ E++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV-- 411
+ AL+DMY+KC C + +F + K WN ++ GF + +QML
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
+DV+ D T + +P + L +HCY ++ F+Y VA+ V Y+KCGSL Y
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
A +F+ I + + +++ QM SG+ P+ T S+L AC
Sbjct: 449 AQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 532 SHAGLVDEGLSLFKFMLK 549
S + G + F+++
Sbjct: 507 SKLKSLRLGKEVHGFIIR 524
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 337/604 (55%), Gaps = 12/604 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + ++++ +WNT++ YV+ GR +A F M+ + P ++ + A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK-PSPVSFVNVFPAVSISR 228
Query: 130 FLDMGVGVHGMTFKAGFDL--DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
+ +G+ K G + D FV +S ++MY G+ E ++ VFD E+ + WNTM
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 188 INGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
I Y +N+ E++ ++ + + + D T + A L+ VELGR+ H V +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
+V+ N+++ MY +CG + +++ + M E DVV+W T+I+ ++ NG LML
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M +G K + ++V +LLSA + + GK HA+ IRQ ++ E + + LIDMY+K
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSG 467
Query: 367 CGNLSYKVFMKT--SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
+S K+F + +++ A WN+++SG+ N + +F++ML ++++P+ T S+
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
LPA + + + +H + IR + VAS LVD+YSK G++ YA +F+
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS--QTKER 585
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
YG+HG GE A+SLF M +SG++P+ ITF +VL ACS++GL+DEGL +F
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VWGALLGACVSHE 603
+ M + + I P +HY CI D+LGR G++N+AY ++ + + N A +WG+LLG+C H
Sbjct: 646 EEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
Query: 604 NVELGEVAARW--TFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
+EL E + F+ +G VLL+N+YA +W+ + VR + GL+K +S
Sbjct: 706 ELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRS 765
Query: 662 LVEV 665
+E+
Sbjct: 766 GIEI 769
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 164/624 (26%), Positives = 293/624 (46%), Gaps = 58/624 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG-LTLPDNFTYPIIIKACSDL 128
LFD +P+ + WNT++ ++ PH+AL + M + T D +TY +KAC++
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMY---MNAG---EKEQAQLVFDLMKEQTVV 182
L G VH + + V NSL+ MY +NA E + + VFD M+ + VV
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVV 180
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
+WNT+I+ Y + R EA R + MM V+P + V+V PA + ++++ + L+
Sbjct: 181 AWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLM 240
Query: 243 KEKG--FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ G + ++ V ++ + MY + G ++ + + + E ++ W T+I Y+ N
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN----D 296
Query: 301 ALMLCRVMLLEGV-KPNLVS--VASLL--SACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
L+ + LE + +VS V LL SA + + G+ H + + E +++
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
+L+ MY++C + S+ VF+ ++ WN ++S F+ N L E + L +M + +
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
D T +LL A + L + + H +LIR G + + S L+D+YSK G + + +
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKL 475
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
F Y ++GH E +F +M++ ++PN +T S+L ACS G
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 536 LVDEGLSLFKFMLKQH--QII----PLVD------------------------HYTCIID 565
VD G L F ++Q+ Q + LVD YT +I
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 566 LLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGAC----VSHENVELGEVAARWTFEL 618
G+ G A +L +M IKP+ + A+L AC + E +++ E R + +
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE-EMREVYNI 654
Query: 619 EPENTGNYVLLANLYAAVGRWRDA 642
+P ++ +Y + ++ VGR +A
Sbjct: 655 QP-SSEHYCCITDMLGRVGRVNEA 677
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 212/464 (45%), Gaps = 16/464 (3%)
Query: 155 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
S L+ G + A+ +FD + + T V WNT+I G+ NN EAL Y+RM
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 215 DCA--TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
+C T S L AC KN++ G+ VH + + VV N++++MYV C + +
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 273 ------LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA 326
+ + M +VV W TLI+ Y+ G A +M+ VKP+ VS ++ A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 327 CGSFGSLNYGKCLHAWAIRQKLE--SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 384
S+ + ++ E ++ V ++ I MYA+ S +VF ++
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 385 PWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
WN ++ ++ N + E+I+LF + + K++ D T+ A + L ++ H +
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
+ ++ + + + L+ +YS+CGS+ + +F + + + ++G +
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF--LSMRERDVVSWNTMISAFVQNGLDD 401
Query: 504 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
+ L +M + G + + IT T++L A S+ + G F+++Q ++ Y +
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--L 459
Query: 564 IDLLGRAGQLNDAYNLIR-TMPIKPNHAVWGALLGACVSHENVE 606
ID+ ++G + + L + + + A W +++ + + E
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 189/520 (36%), Positives = 296/520 (56%), Gaps = 12/520 (2%)
Query: 155 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
+L+ Y G E+A+ +FD M ++ VV+W MI GY +N A ++ M+ G P
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCG-QMKEAWWL 273
+ T+ SVL +C +K + G VH +V + G G++ V NAM++MY C M+ A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 274 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG--VKPNLVSVASLLSACGSFG 331
++ + VTWTTLI G+ GD L + + MLLE V P +++A + A S
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--VRASASID 227
Query: 332 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNAL 389
S+ GK +HA I++ +S + V +++D+Y C CG LS F + K WN L
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLY--CRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
+S + S EA+ +F++ + P+ TF SL+ A A +A L +H + R GF
Sbjct: 286 ISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 509
+E+A+ L+D+Y+KCG++ + +F I + YG HG+G AV LF
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEI-VDRRNLVSWTSMMIGYGSHGYGAEAVELF 403
Query: 510 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 569
++MV SG++P++I F +VL AC HAGLV++GL F M ++ I P D Y C++DLLGR
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 570 AGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE-NVELGEVAARWTFELEPENTGNYVL 628
AG++ +AY L+ MP KP+ + WGA+LGAC +H+ N + +AAR EL+P+ G YV+
Sbjct: 464 AGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVM 523
Query: 629 LANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
L+ +YAA G+W D VR M+ ++G +K S + V ++
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 219/430 (50%), Gaps = 35/430 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P R + +W M+ Y A F EM+ G T P+ FT ++K+C ++
Sbjct: 67 LFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG-TSPNEFTLSSVLKSCRNMK 125
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAG-EKEQAQLVFDLMKEQTVVSWNTMI 188
L G VHG+ K G + +V N+++ MY E A L+F +K + V+W T+I
Sbjct: 126 VLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLI 185
Query: 189 NGYFRNNRAEEALRVYNRMM--DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
G+ L++Y +M+ +A V P C T+ + A + +V G+++HA V ++G
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTTGKQIHASVIKRG 243
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
F N+ V N++LD+Y +CG + EA +EM++ D++TW TLI+ + D+ AL++ +
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALLMFQ 302
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
+G PN + SL++AC + +LN G+ LH R+ V + ALIDMYAK
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK-- 360
Query: 367 CGNL--SYKVFMKTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
CGN+ S +VF + +R W +++ G+ + EA++LF +M+ ++PD F +
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGY 471
+L A H L+ G Y ++ + +VD+ + G +G
Sbjct: 421 VLSACR-----------HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469
Query: 472 AHHIFNIIPL 481
A+ + +P
Sbjct: 470 AYELVERMPF 479
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 177/352 (50%), Gaps = 13/352 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + ++ +W T++ + +G L ++ +M+ + + I ++A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP-YCITIAVRASASID 227
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +H K GF + V NS+L +Y G +A+ F M+++ +++WNT+I+
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
R++ + EAL ++ R G P+C T S++ AC + + G+++H + +GF
Sbjct: 288 ELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCRVM 308
N+ + NA++DMY KCG + ++ + E+ D ++V+WT+++ GY +G A+ L M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+ G++P+ + ++LSAC G + G K + + + + ++D+ +
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 368 GNLSYKVFMKTS-KKRTAPWNALL---SGFIHNSLV-----REAIQLFKQML 410
+Y++ + K + W A+L HN L+ R+ ++L +M+
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/552 (32%), Positives = 298/552 (53%), Gaps = 6/552 (1%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 180
I++ C+ D G VH K+G L+ N L+ MY E A VFD M E+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 240
VVSW+ +++G+ N + +L +++ M G+ P+ T + L ACGLL +E G ++H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ GF + V N+++DMY KCG++ EA + + + +++W +I G++ G
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 301 ALMLCRVMLLEGVK--PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE--SEVIVET 356
AL +M +K P+ ++ SLL AC S G + GK +H + +R S +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
+L+D+Y KC + K F + +K W++L+ G+ EA+ LFK++ + Q
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
D+ +S++ +A A L+Q + ++ V + +VD+Y KCG + A F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ L YGKHG G+ +V +F +M++ ++P+++ + +VL ACSH+G+
Sbjct: 372 AEMQLKDVISWTVVITG--YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ EG LF +L+ H I P V+HY C++DLLGRAG+L +A +LI TMPIKPN +W LL
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 597 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
C H ++ELG+ + ++ +N NYV+++NLY G W + N R++ N+ GL+K
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKK 549
Query: 657 LPAQSLVEVRSE 668
S VE+ E
Sbjct: 550 EAGMSWVEIERE 561
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 256/514 (49%), Gaps = 44/514 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++P+R++ SW+ +M +V G +L+LF EM G+ P+ FT+ +KAC L+
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLLN 121
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G+ +HG K GF++ V NSL+ MY G +A+ VF + +++++SWN MI
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 190 GYFRNNRAEEALRVYNRMMDAGVE--PDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
G+ +AL + M +A ++ PD T+ S+L AC + G+++H + GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 248 W--GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
+ + +++D+YVKCG + A +++ E +++W++LI GY G+ A+ L
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
+ + + + +++S++ F L GK + A A++ E V +++DMY KC
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ + K F + K W +++G+ + L ++++++F +ML +++PD + ++L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 426 PAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
A + +K+ + L+ + G R+E + +VD+ + G L A H+ + +P
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP---- 477
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
++PN + ++L C G ++ G +
Sbjct: 478 --------------------------------IKPNVGIWQTLLSLCRVHGDIELGKEVG 505
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 578
K +L+ P +Y + +L G+AG N+ N
Sbjct: 506 KILLRIDAKNPA--NYVMMSNLYGQAGYWNEQGN 537
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 215/473 (45%), Gaps = 43/473 (9%)
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
+VS+L C + G +VH + + G N++ N ++DMY KC + A+ + + M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
E +VV+W+ L++G++LNGD + +L L M +G+ PN + ++ L ACG +L G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+H + ++ E V V +L+DMY+KC N + KVF + + WNA+++GF+H
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 399 VREAIQLFKQMLVKDVQ--PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF--LYRLE 454
+A+ F M +++ PD T SLL A + + IH +L+RSGF
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
+ LVD+Y KCG L A F+ I Y + G A+ LF ++ +
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIK--EKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEG---------------LSLFKFMLKQHQIIPLVDH 559
Q + +S++ + L+ +G S+ ++ + LVD
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 560 ---------------YTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVS 601
+T +I G+ G + + M I+P+ + A+L AC
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426
Query: 602 HENVELGEVAARWTFE---LEPENTGNYVLLANLYAAVGRWRDAENVRDMVNV 651
++ GE E ++P +Y + +L GR ++A+++ D + +
Sbjct: 427 SGMIKEGEELFSKLLETHGIKP-RVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 8/296 (2%)
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
+ NLVS+ L C G + G +H + ++ +I LIDMY KC ++YK
Sbjct: 6 RQNLVSI---LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
VF ++ W+AL+SG + N ++ ++ LF +M + + P+ TF++ L A +L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 493
L++ + IH + ++ GF +EV + LVD+YSKCG + A +F I
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI--VDRSLISWNAMI 180
Query: 494 XXYGKHGHGEMAVSLFNQMVQSGVQ--PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
+ G+G A+ F M ++ ++ P++ T TS+L ACS G++ G + F+++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 552 QIIPLVDHYT-CIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
P T ++DL + G L A + K + +LG E VE
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 318/622 (51%), Gaps = 29/622 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM--IHSGLTLPDNFTYPIIIKACSD 127
+F +P+++ SW+ ++ VQ AL F EM +++G++ Y ++++C+
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS---IYASVLRSCAA 293
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
LS L +G +H K+ F D V+ + L MY + AQ++FD + S+N M
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I GY + +AL +++R+M +G+ D ++ V AC L+K + G +++ L +
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++ V NA +DMY KC + EA+ + +EM D V+W +I + NG L L
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
ML ++P+ + S+L AC GSL YG +H+ ++ + S V +LIDMY+KC
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 368 --------------GNLS------YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
N+S K+ K ++ WN+++SG++ +A LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
+M+ + PD T+ ++L A LA IH +I+ + + S LVD+YSKCG
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 527
L + +F Y HG GE A+ LF +M+ ++PN +TF S+
Sbjct: 653 DLHDSRLMFE--KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710
Query: 528 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKP 587
L AC+H GL+D+GL F M + + + P + HY+ ++D+LG++G++ A LIR MP +
Sbjct: 711 LRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
Query: 588 NHAVWGALLGACVSHE-NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 646
+ +W LLG C H NVE+ E A L+P+++ Y LL+N+YA G W ++R
Sbjct: 771 DDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830
Query: 647 DMVNVVGLRKLPAQSLVEVRSE 668
+ L+K P S VE++ E
Sbjct: 831 RNMRGFKLKKEPGCSWVELKDE 852
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 258/554 (46%), Gaps = 28/554 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
F+ +P R + SWN+M+ Y+Q G ++ +FV+M G+ D T+ II+K CS L
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF-DGRTFAIILKVCSFLE 194
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+G+ +HG+ + G D D ++LL MY ++ VF + E+ VSW+ +I
Sbjct: 195 DTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA 254
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G +NN AL+ + M + SVL +C L + LG ++HA + F
Sbjct: 255 GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAA 314
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ +VR A LDMY KC M++A L + + + ++ +I GY AL+L ++
Sbjct: 315 DGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 374
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G+ + +S++ + AC L+ G ++ AI+ L +V V A IDMY KC
Sbjct: 375 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 434
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+++VF + ++ WNA+++ N E + LF ML ++PD TF S+L A
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-C 493
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
L M IH +++SG V L+D+YSKCG + A I +
Sbjct: 494 TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTM 553
Query: 490 XXXXXXYGKHGHGEMAVS-------------------LFNQMVQSGVQPNQITFTSVLHA 530
+ K EM VS LF +M++ G+ P++ T+ +VL
Sbjct: 554 EELEKMHNKRLQ-EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDT 612
Query: 531 CSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQLNDAYNLIRTMPIKPN 588
C++ G + ++K+ D Y C ++D+ + G L+D+ L+ ++ +
Sbjct: 613 CANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRD 668
Query: 589 HAVWGALLGACVSH 602
W A++ H
Sbjct: 669 FVTWNAMICGYAHH 682
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 215/453 (47%), Gaps = 35/453 (7%)
Query: 115 NFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 174
NF++ + K C+ L++G H +GF TFV N LL +Y N+ + A +VFD
Sbjct: 50 NFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 107
Query: 175 -------------------------------LMKEQTVVSWNTMINGYFRNNRAEEALRV 203
+M + VVSWN+M++GY +N + +++ V
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 204 YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK 263
+ M G+E D T +L C L++ LG ++H +V G ++V +A+LDMY K
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 264 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL 323
+ E+ + + E + V+W+ +I G + N AL + M + AS+
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 324 LSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT 383
L +C + L G LHA A++ ++ IV TA +DMYAKC+ + +F +
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 384 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
+NA+++G+ +A+ LF +++ + D + + + A A++ L + + I+
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
I+S + VA+ +D+Y KC +L A +F+ + + ++G G
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD--EMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 504 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ LF M++S ++P++ TF S+L AC+ L
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 179/353 (50%), Gaps = 12/353 (3%)
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++V N M++ Y K M +A N M DVV+W ++++GY+ NG++ ++ + M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
EG++ + + A +L C + G +H +R +++V+ +AL+DMYAK
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
S +VF +K + W+A+++G + N+L+ A++ FK+M + + + S+L + A
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
L++L+ +H + ++S F V + +D+Y+KC ++ A +F+
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD--NSENLNRQSY 350
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
Y + HG A+ LF++++ SG+ ++I+ + V AC+ + EGL ++ +K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 550 QHQIIPLVDHYTCI----IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ + C+ ID+ G+ L +A+ + M + + W A++ A
Sbjct: 411 SSLSLDV-----CVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/600 (31%), Positives = 321/600 (53%), Gaps = 7/600 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ + +R + W M+ Y + G +A +L EM G+ P T ++ +++
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK-PGPVTLLEMLSGVLEIT 161
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +H GFD D V NS+L +Y A+ +FD M+++ +VSWNTMI+
Sbjct: 162 QLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY E L++ RM G+ PD T + L G + ++E+GR +H + + GF
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+M ++ A++ MY+KCG+ + ++ + + DVV WT +I+G + G A AL++ ML
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G + ++AS++++C GS + G +H + +R + +LI MYAKC +
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP-DNATFNSLLPAY 428
S +F + +++ WNA++SG+ N + +A+ LF++M K VQ D+ T SLL A
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ L IHC +IRS V + LVD+YSKCG L A F+ I
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW--KDVVS 516
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG G++A+ ++++ + SG++PN + F +VL +CSH G+V +GL +F M+
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ + P +H C++DLL RA ++ DA+ + +P+ V G +L AC ++ E+
Sbjct: 577 RDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVE 636
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
++ EL+P + G+YV L + +AA+ RW D + + +GL+KLP S +E+ +
Sbjct: 637 DIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGK 696
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 251/520 (48%), Gaps = 13/520 (2%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
+N+ + G L+ F M+ + L LPD FT+P ++KAC+ L L G+ +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKL-LPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 201
GF D ++ +SL+ +Y G A+ VF+ M+E+ VV W MI Y R EA
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 202 RVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY 261
+ N M G++P T++ +L G+L+ +L + +H GF ++ V N+ML++Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLS--GVLEITQL-QCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 262 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVA 321
KC + +A L ++M++ D+V+W T+I+GY G+ L L M +G++P+ +
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
+ LS G+ L G+ LH ++ + ++ ++TALI MY KC SY+V K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 382 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
W ++SG + +A+ +F +ML + S++ + A L ++H
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 501
Y++R G+ + L+ +Y+KCG L + IF + Y ++
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFE--RMNERDLVSWNAIISGYAQNVD 427
Query: 502 GEMAVSLFNQMVQSGVQP-NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP--LVD 558
A+ LF +M VQ + T S+L ACS AG + G L ++ + I P LVD
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVD 486
Query: 559 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
T ++D+ + G L A ++ K + WG L+
Sbjct: 487 --TALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAG 523
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 200/424 (47%), Gaps = 9/424 (2%)
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
+N+ IN + ++ L ++ M+ + PD T S+L AC L+ + G +H V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
GF + + ++++++Y K G + A + EM E DVV WT +I Y G A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 363
L M +G+KP V++ +LS L +CLH +A+ + ++ V +++++Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 364 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
KC+ + +F + ++ WN ++SG+ + E ++L +M ++PD TF +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
L + DL+ +HC ++++GF + + + L+ +Y KCG ++ + IP
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP--N 308
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
+ G E A+ +F++M+QSG + SV+ +C+ G D G S+
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 544 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 603
++L+ H +I + + G L+ + + M + + W A++ +
Sbjct: 369 HGYVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYA--Q 424
Query: 604 NVEL 607
NV+L
Sbjct: 425 NVDL 428
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 310/586 (52%), Gaps = 5/586 (0%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
WN M+ + G +L+L++ ++ + L ++ + ACS G +H
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST-SFTGALGACSQSENSGFGRQIHCDV 298
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 201
K G D +V SLL+MY G +A+ VF + ++ + WN M+ Y N+ AL
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 202 RVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY 261
++ M V PD T+ +V+ C +L G+ VHA + ++ + +A+L +Y
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 262 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE--GVKPNLVS 319
KCG +A+ + M+E D+V W +LI+G NG + AL + M + +KP+
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 379
+ S+ +AC +L +G +H I+ L V V ++LID+Y+KC ++ KVF S
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538
Query: 380 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 439
+ WN+++S + N+L +I LF ML + + PD+ + S+L A + A L + +
Sbjct: 539 TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS 598
Query: 440 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKH 499
+H Y +R G + + L+D+Y KCG YA +IF + YG H
Sbjct: 599 LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK--KMQHKSLITWNLMIYGYGSH 656
Query: 500 GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 559
G A+SLF++M ++G P+ +TF S++ AC+H+G V+EG ++F+FM + + I P ++H
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 560 YTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 619
Y ++DLLGRAG L +AY+ I+ MPI+ + ++W LL A +H NVELG ++A +E
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776
Query: 620 PENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
PE YV L NLY G +A + ++ GL K P S +EV
Sbjct: 777 PERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 254/516 (49%), Gaps = 11/516 (2%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFL-DMG 134
R + WN+M+ Y + R + + F M+ G+ PD F+ I++ C + +F + G
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVR-PDAFSLSIVVSVMCKEGNFRREEG 189
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMKEQTVVSWNTMINGYFR 193
+HG + D D+F++ +L+ MY G A VF ++ + VV WN MI G+
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
+ E +L +Y + V+ + L AC +N GR++H V + G + V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
++L MY KCG + EA + + + + + W ++ Y N SAL L M + V
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
P+ ++++++S C G NYGK +HA ++ ++S +E+AL+ +Y+KC C +Y
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--VQPDNATFNSLLPAYAVL 431
VF +K W +L+SG N +EA+++F M D ++PD+ S+ A A L
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
L+ + +H +I++G + + V S L+D+YSKCG A +F +
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT--SMSTENMVAWNS 547
Query: 492 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
Y ++ E+++ LFN M+ G+ P+ ++ TSVL A S + +G SL + L+
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 552 QIIPLVDHY-TCIIDLLGRAGQLNDAYNLIRTMPIK 586
IP H +ID+ + G A N+ + M K
Sbjct: 608 --IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 213/415 (51%), Gaps = 4/415 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + + L WN M+ Y + + AL+LF M + LPD+FT +I CS L
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV-LPDSFTLSNVISCCSVLG 387
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G VH FK + ++++LL +Y G A LVF M+E+ +V+W ++I+
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 190 GYFRNNRAEEALRVYNRMM--DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
G +N + +EAL+V+ M D ++PD + SV AC L+ + G +VH + + G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
N+ V ++++D+Y KCG + A + M ++V W ++I+ Y N ++ L +
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
ML +G+ P+ VS+ S+L A S SL GK LH + +R + S+ ++ ALIDMY KC
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ +F K K WN ++ G+ + A+ LF +M PD+ TF SL+ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 428 YAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+++ NI ++ + G +E + +VD+ + G L A+ +P+
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPI 742
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 256/538 (47%), Gaps = 19/538 (3%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
S N+ +R +Q G AL+L+ + S FT+P ++KACS L+ L G +HG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVS------WNTMINGYFR 193
G+ D F+ SL+ MY+ G + A VFD + Q+ VS WN+MI+GYF+
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 194 NNRAEEALRVYNRMMDAGVEPDC---ATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
R +E + + RM+ GV PD + VVSV+ G + E G+++H + +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFMLRNSLDTD 204
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ A++DMY K G +AW + E+ D+++VV W +I G+ +G S+L L +
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
VK S L AC + +G+ +H ++ L ++ V T+L+ MY+KC
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ VF KR WNA+++ + N A+ LF M K V PD+ T ++++ +
Sbjct: 325 EAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCS 384
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
VL ++H L + + S L+ +YSKCG A+ +F +
Sbjct: 385 VLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFK--SMEEKDMVAW 442
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMV--QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
K+G + A+ +F M ++P+ TSV +AC+ + GL + M
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
+K ++ + + +IDL + G A + +M + N W +++ +C S N+
Sbjct: 503 IKTGLVLNVFVG-SSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 118/223 (52%), Gaps = 3/223 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F ++ ++ +WN+M+ Y + P +++LF M+ G+ PD+ + ++ A S +
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI-FPDSVSITSVLVAISSTA 591
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G +HG T + G DT ++N+L+ MY+ G + A+ +F M+ +++++WN MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFW 248
GY + AL +++ M AG PD T +S++ AC VE G+ + +K+ G
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 290
NM M+D+ + G ++EA+ M E D W L++
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLS 754
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 292/549 (53%), Gaps = 38/549 (6%)
Query: 156 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 215
++++Y N +A L+F +K V++W ++I + + +AL + M +G PD
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 216 CATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 275
SVL +C ++ ++ G VH + G ++ NA+++MY K M + N
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 276 EMDE------------------------------------TDVVTWTTLINGYILNGDAR 299
DE DVV++ T+I GY +G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 300 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
AL + R M +KP+ +++S+L + + GK +H + IR+ ++S+V + ++L+
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
DMYAK S +VF + + WN+L++G++ N EA++LF+QM+ V+P
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV 344
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
F+S++PA A LA L +H Y++R GF + +AS LVD+YSKCG++ A IF+
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD-- 402
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
+ + HGHG AVSLF +M + GV+PNQ+ F +VL ACSH GLVDE
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 540 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 599
F M K + + ++HY + DLLGRAG+L +AYN I M ++P +VW LL +C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 600 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPA 659
H+N+EL E A F ++ EN G YVL+ N+YA+ GRW++ +R + GLRK PA
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 660 QSLVEVRSE 668
S +E++++
Sbjct: 583 CSWIEMKNK 591
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 221/444 (49%), Gaps = 38/444 (8%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F TL + +W +++R + AL FVEM SG PD+ +P ++K+C+ +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG-RCPDHNVFPSVLKSCTMMMD 120
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYM-----------------------NAGEK- 166
L G VHG + G D D + N+L+ MY N+G++
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 167 ------------EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
+ + VF++M + VVS+NT+I GY ++ E+ALR+ M ++P
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
D T+ SVLP +V G+E+H V KG ++ + ++++DMY K +++++ +
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
+ + D ++W +L+ GY+ NG AL L R M+ VKP V+ +S++ AC +L+
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 394
GK LH + +R S + + +AL+DMY+KC + K+F + + W A++ G
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR-SGFLYRL 453
+ EA+ LF++M + V+P+ F ++L A + + + +A + + G L
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 454 EVASILVDIYSKCGSLGYAHHIFN 477
E + + D+ + G L A++ +
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFIS 504
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 180/336 (53%), Gaps = 12/336 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P++ + S+NT++ Y Q G DAL + EM + L PD+FT ++ S+
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK-PDSFTLSSVLPIFSEYV 256
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +HG + G D D ++ +SL+ MY + E ++ VF + + +SWN+++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +N R EALR++ +M+ A V+P SV+PAC L + LG+++H V GF
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N+ + +A++DMY KCG +K A + + M+ D V+WT +I G+ L+G A+ L M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 310 LEGVKPNLVSVASLLSACGSFGSLN-----YGKCLHAWAIRQKLESEVIVETALIDMYAK 364
+GVKPN V+ ++L+AC G ++ + + + Q+LE A+ D+ +
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH----YAAVADLLGR 492
Query: 365 CNCGNLSYKVFMKTSKKRTAP-WNALLSG-FIHNSL 398
+Y K + T W+ LLS +H +L
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL 528
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 107/271 (39%), Gaps = 76/271 (28%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F L R SWN+++ YVQ GR ++AL LF +M+ + + P + +I AC+ L+
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK-PGAVAFSSVIPACAHLA 357
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV----------------- 172
L +G +HG + GF + F+ ++L+ MY G + A+ +
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 173 --------------FDLMKEQTVV---------------------SW---NTMINGYFRN 194
F+ MK Q V +W N+M Y N
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 195 N-------------RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
RA + YN + VEP + ++L +C + KN+EL +
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEK---- 533
Query: 242 VKEKGFW---GNMVVRNAMLDMYVKCGQMKE 269
V EK F NM M +MY G+ KE
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYASNGRWKE 564
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/407 (17%), Positives = 151/407 (37%), Gaps = 81/407 (19%)
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 379
+ +L+ S + K LHA IR + S + +I +Y + + +F
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLK 66
Query: 380 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 439
W +++ F SL +A+ F +M PD+ F S+L + ++ DL+ +
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 440 IHCYLIRSGFLYRLEVASILVDIYSKCGSLG----------------------------- 470
+H +++R G L + L+++Y+K +G
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 471 -------YAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQIT 523
+F ++P Y + G E A+ + +M + ++P+ T
Sbjct: 187 IMPFGIDSVRRVFEVMP--RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 524 FTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA------------- 570
+SVL S V +G + +++++ I V + ++D+ ++
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
Query: 571 ------------------GQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGE 609
G+ N+A L R M +KP + +++ AC + LG+
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 610 VAARWTFELEPENTGNYVLLA----NLYAAVGRWRDAENVRDMVNVV 652
+ G+ + +A ++Y+ G + A + D +NV+
Sbjct: 364 QLHGYVLR---GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 312/609 (51%), Gaps = 18/609 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R SWNTM+ Y G+ DA LF M SG + D +++ ++K + +
Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV-DGYSFSRLLKGIASVK 115
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
D+G VHG+ K G++ + +V +SL+ MY E A F + E VSWN +I
Sbjct: 116 RFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIA 175
Query: 190 GYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPA------CGLLKNVELGREVHALV 242
G+ + + A + M M A V D T +L C LLK +VHA V
Sbjct: 176 GFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK------QVHAKV 229
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSA 301
+ G + + NAM+ Y CG + +A + + + + D+++W ++I G+ + SA
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L M V+ ++ + LLSAC +GK LH I++ LE ALI M
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 349
Query: 362 YAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
Y + G + + +F K WN++++GF L +A++ F + +++ D+
Sbjct: 350 YIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDY 409
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
F++LL + + LA L+ IH +SGF+ V S L+ +YSKCG + A F I
Sbjct: 410 AFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQI 469
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
Y +HG G++++ LF+QM V+ + +TFT++L ACSH GL+ E
Sbjct: 470 S-SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQE 528
Query: 540 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 599
GL L M ++I P ++HY +DLLGRAG +N A LI +MP+ P+ V LG C
Sbjct: 529 GLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVC 588
Query: 600 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPA 659
+ +E+ A E+EPE+ YV L+++Y+ + +W + +V+ M+ G++K+P
Sbjct: 589 RACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPG 648
Query: 660 QSLVEVRSE 668
S +E+R++
Sbjct: 649 WSWIEIRNQ 657
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 220/479 (45%), Gaps = 10/479 (2%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
H K G D +V N +L Y+ G A ++FD M ++ VSWNTMI+GY +
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
E+A ++ M +G + D + +L +K +LG +VH LV + G+ N+ V ++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE-GVKP 315
++DMY KC ++++A+ E+ E + V+W LI G++ D ++A L +M ++ V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
+ + A LL+ N K +HA ++ L+ E+ + A+I YA C + + +VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 376 MK-TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL 434
K WN++++GF + L A +LF QM V+ D T+ LL A +
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 435 KQAMNIHCYLIRSGFLYRLEVASILVDIYSK--CGSLGYAHHIFNIIPLXXXXXXXXXXX 492
++H +I+ G + L+ +Y + G++ A +F L
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE--SLKSKDLISWNSI 379
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
+ + G E AV F+ + S ++ + F+++L +CS + G + K
Sbjct: 380 ITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS-G 438
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 611
+ + +I + + G + A + + K + W A++ H LG+V+
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH---GLGQVS 494
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 204/610 (33%), Positives = 320/610 (52%), Gaps = 19/610 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ + R+ + N +M V+ +A LF++M P+ +Y I++ + + S
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYS 322
Query: 130 F-----LDMGVGVHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 183
L G VHG G D + N L+ MY G A+ VF M ++ VS
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
WN+MI G +N EA+ Y M + P T++S L +C LK +LG+++H
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+ G N+ V NA++ +Y + G + E + + M E D V+W ++I + + +
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 304 LCRVMLLE-GVKPNLVSVASLLSACGS--FGSLNYGKCLHAWAIRQKLESEVIVETALID 360
+C + G K N ++ +S+LSA S FG L GK +H A++ + E E ALI
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIA 560
Query: 361 MYAKCNCGNLSYKVFMKTSKKR-TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
Y KC + K+F + +++R WN+++SG+IHN L+ +A+ L ML + D+
Sbjct: 561 CYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSF 620
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
+ ++L A+A +A L++ M +H +R+ + V S LVD+YSKCG L YA FN +
Sbjct: 621 MYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM 680
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVD 538
P+ Y +HG GE A+ LF M G P+ +TF VL ACSHAGL++
Sbjct: 681 PVRNSYSWNSMISG--YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
EG F+ M + + P ++H++C+ D+LGRAG+L+ + I MP+KPN +W +LGA
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
Query: 599 C--VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
C + ELG+ AA F+LEPEN NYVLL N+YAA GRW D R + ++K
Sbjct: 799 CCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 657 LPAQSLVEVR 666
S V ++
Sbjct: 859 EAGYSWVTMK 868
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 228/498 (45%), Gaps = 25/498 (5%)
Query: 125 CSDLSFLDMGVG-------VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 177
C LSF+ VG H +K D D ++ N+L+ Y+ G+ A+ VFD M
Sbjct: 4 CVPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP 63
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL--G 235
+ VSW +++GY RN +EAL M+ G+ + VSVL AC + +V + G
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKC-GQMKEAWWLANEMDETDVVTWTTLINGYIL 294
R++H L+ + + + VV N ++ MY KC G + A +++ + V+W ++I+ Y
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 295 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK--LESEV 352
GD RSA + M +G +P + SL++ S + QK L +++
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 353 IVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM- 409
V + L+ +AK G+LSY KVF + + N L+ G + EA +LF M
Sbjct: 244 FVGSGLVSAFAK--SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 410 LVKDVQPDN-ATFNSLLPAYAVLAD--LKQAMNIHCYLIRSGFL-YRLEVASILVDIYSK 465
+ DV P++ S P Y++ + LK+ +H ++I +G + + + + + LV++Y+K
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 466 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 525
CGS+ A +F + ++G AV + M + + P T
Sbjct: 362 CGSIADARRVFYF--MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 526 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI 585
S L +C+ G + LK I V ++ L G LN+ + +MP
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP- 477
Query: 586 KPNHAVWGALLGACVSHE 603
+ + W +++GA E
Sbjct: 478 EHDQVSWNSIIGALARSE 495
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 249/547 (45%), Gaps = 19/547 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R+ SW ++ Y + G +AL +M+ G+ + + + +++AC ++
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGI-FSNQYAFVSVLRACQEIG 116
Query: 130 FLDM--GVGVHGMTFKAGFDLDTFVQNSLLAMYMNA-GEKEQAQLVFDLMKEQTVVSWNT 186
+ + G +HG+ FK + +D V N L++MY G A F ++ + VSWN+
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNS 176
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLK-NVELGREVHALVKE 244
+I+ Y + A R+++ M G P T S V AC L + +V L ++ +++
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN--GDARSAL 302
G ++ V + ++ + K G + A + N+M+ + VT L+ G + G+ + L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 303 MLCRVMLLEGVKPNLVSVASLLSACGSFG-----SLNYGKCLHAWAIRQKL-ESEVIVET 356
+ +++ V P S LLS+ + L G+ +H I L + V +
Sbjct: 297 FMDMNSMID-VSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
L++MYAKC + +VF + K + WN++++G N EA++ +K M D+ P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+ T S L + A L K IH ++ G + V++ L+ +Y++ G L IF
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ +P + E V N ++G + N+ITF+SVL A S
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSF 532
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ G + LK + I +I G+ G+++ + M + ++ W +++
Sbjct: 533 GELGKQIHGLALK-NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 597 GACVSHE 603
+ +E
Sbjct: 592 SGYIHNE 598
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/568 (32%), Positives = 303/568 (53%), Gaps = 15/568 (2%)
Query: 105 MIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG-VHGMTFKAGFDLD-TFVQNSLLAMYMN 162
M+H L P IK +S L + +H G L+ + + L+A
Sbjct: 9 MLHRTLLCPKR------IKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGR 62
Query: 163 AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSV 222
GE A+ VFD + ++ V +N+MI Y R +E LR+Y++M+ ++PD +T
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMT 122
Query: 223 LPAC--GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
+ AC GL+ +E G V + G+ ++ V +++L++Y+KCG+M EA L +M +
Sbjct: 123 IKACLSGLV--LEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 340
DV+ WTT++ G+ G + A+ R M EG + V + LL A G G G+ +H
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 341 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 400
+ R L V+VET+L+DMYAK ++ +VF + K W +L+SGF N L
Sbjct: 241 GYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLAN 300
Query: 401 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 460
+A + +M QPD T +L A + + LK +HCY+++ L R+ A+ L+
Sbjct: 301 KAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALM 359
Query: 461 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 520
D+YSKCG+L + IF + YG HG+G+ VSLF +M +S ++P+
Sbjct: 360 DMYSKCGALSSSREIFEHVG--RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD 417
Query: 521 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI 580
TF S+L A SH+GLV++G F M+ +++I P HY C+IDLL RAG++ +A ++I
Sbjct: 418 HATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMI 477
Query: 581 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWR 640
+ + +W ALL C++H N+ +G++AA +L P++ G L++N +A +W+
Sbjct: 478 NSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWK 537
Query: 641 DAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+ VR ++ + K+P S +EV E
Sbjct: 538 EVAKVRKLMRNGAMEKVPGYSAIEVNGE 565
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 222/412 (53%), Gaps = 9/412 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD LPQR + +N+M+ +Y + P + L L+ +MI + PD+ T+ + IKAC
Sbjct: 72 VFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQ-PDSSTFTMTIKACLSGL 130
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G V G+ D FV +S+L +YM G+ ++A+++F M ++ V+ W TM+
Sbjct: 131 VLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVT 190
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ + ++ +A+ Y M + G D ++ +L A G L + ++GR VH + G
Sbjct: 191 GFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM 250
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N+VV +++DMY K G ++ A + + M V+W +LI+G+ NG A A M
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G +P+LV++ +L AC GSL G+ +H + +++ + V TAL+DMY+KC +
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TALMDMYSKCGALS 369
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
S ++F +K WN ++S + + +E + LF +M +++PD+ATF SLL A +
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVAS----ILVDIYSKCGSLGYAHHIFN 477
++Q + +I Y+++ + L+D+ ++ G + A + N
Sbjct: 430 HSGLVEQGQHWFSVMINK---YKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/605 (29%), Positives = 313/605 (51%), Gaps = 23/605 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSG--LTLPDNFTYPIIIKACSD 127
+FD +P R + +W ++ +VQ G L +M +G + P+ T +ACS+
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L L G +HG K G FVQ+S+ + Y +G +A L F + ++ + SW ++
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I R+ EE+ ++ M + G+ PD + ++ G + V G+ H V F
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCR 306
+ V N++L MY K + A L + +E + W T++ GY M C
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY--------GKMKCH 414
Query: 307 VMLLE--------GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
V +E G++ + S S++S+C G++ GK LH + ++ L+ + V +L
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 359 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
ID+Y K +++++F + + WNA+++ ++H +AI LF +M+ ++ +P +
Sbjct: 475 IDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 419 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 478
T +LL A L++ IH Y+ + L +++ L+D+Y+KCG L + +F+
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD- 592
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
YG HG E A++LF+QM +S V+P TF ++L AC+HAGLV+
Sbjct: 593 -AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 651
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+G LF + Q+ + P + HY+C++DLL R+G L +A + + +MP P+ +WG LL +
Sbjct: 652 QGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 710
Query: 599 CVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLP 658
C++H E+G A +P+N G Y++LAN+Y+A G+W +AE R+M+ G+ K
Sbjct: 711 CMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRA 770
Query: 659 AQSLV 663
S+V
Sbjct: 771 GHSVV 775
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/621 (25%), Positives = 294/621 (47%), Gaps = 55/621 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + +R +F WN++++ + G +L F M+ SG + PD+FT P+++ AC++L
Sbjct: 81 VFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS-PDHFTAPMVVSACAELL 139
Query: 130 FLDMGVGVHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ +G VHG+ K GFD +T V S + Y G + A LVFD M ++ VV+W +I
Sbjct: 140 WFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAII 199
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVE---PDCATVVSVLPACGLLKNVELGREVHALVKEK 245
+G+ +N +E L +M AG + P+ T+ AC L ++ GR +H +
Sbjct: 200 SGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN 259
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
G + V+++M Y K G EA+ E+ + D+ +WT++I +GD + +
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
M +G+ P+ V ++ L++ G + GK H + IR + V +L+ MY K
Sbjct: 320 WEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKF 379
Query: 366 NCGNLSYKVFMKTSKK-RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
+++ K+F + S++ WN +L G+ + I+LF+++ ++ D+A+ S+
Sbjct: 380 ELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSV 439
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-----NII 479
+ + + + + ++HCY++++ + V + L+D+Y K G L A +F N+I
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVI 499
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
Y E A++LF++MV +P+ IT ++L AC + G ++
Sbjct: 500 TW--------NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 540 GLSLFKFMLK-QHQI-----IPLVDHYT------------------------CIIDLLGR 569
G + +++ + +H++ L+D Y +I G
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 570 AGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE--VAARWTFELEPENTG 624
G + A L M +KP + ALL AC VE G+ ++++P N
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKP-NLK 670
Query: 625 NYVLLANLYAAVGRWRDAENV 645
+Y L +L + G +AE+
Sbjct: 671 HYSCLVDLLSRSGNLEEAEST 691
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 143/557 (25%), Positives = 246/557 (44%), Gaps = 48/557 (8%)
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
+ + G + FV + L++ Y + G+ + VF L+ + + WN++I +F N
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-KEKGFWGNMVVRNA 256
+L + M+ +G PD T V+ AC L +G VH LV K GF N V +
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGV-- 313
+ Y KCG +++A + +EM + DVV WT +I+G++ NG++ L LC+ M G
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK-MHSAGSDV 225
Query: 314 -KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
KPN ++ AC + G+L G+CLH +A++ L S V++++ Y+K + +Y
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
F + + W ++++ + + E+ +F +M K + PD + L+ +
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMM 345
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
+ Q H ++IR F V + L+ +Y K L A +F I
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS-EEGNKEAWNTM 404
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
YGK + LF ++ G++ + + TSV+ +CSH G V G SL +++K
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT-S 463
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNL--------------------------------- 579
+ + +IDL G+ G L A+ +
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 580 IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE-NTGNYVLLANLYAAVGR 638
+ + KP+ LL ACV+ ++E G++ R+ E E E N L ++YA G
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 639 WR------DAENVRDMV 649
DA N +D V
Sbjct: 584 LEKSRELFDAGNQKDAV 600
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 135/329 (41%), Gaps = 6/329 (1%)
Query: 226 CGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTW 285
C ++E R+ +AL+ G N+ V + ++ Y G+ + + + + D+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 286 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
++I + NGD +L MLL G P+ + ++SAC + G +H ++
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 346 Q-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 404
+ V + + Y+KC + VF + + W A++SG + N +
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 405 LFKQM--LVKDV-QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 461
+M DV +P+ T A + L LK+ +H + +++G V S +
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 521
YSK G+ A+ F L + G E + +F +M G+ P+
Sbjct: 274 FYSKSGNPSEAYLSFR--ELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLKQ 550
+ + +++ LV +G + F+++
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRH 360
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 311/601 (51%), Gaps = 9/601 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R++ +W T++ Y + + L LF+ M + G T P++FT+ + ++
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG-TQPNSFTFAAALGVLAEEG 208
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G+ VH + K G D V NSL+ +Y+ G +A+++FD + ++VV+WN+MI+
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY N EAL ++ M V ++ SV+ C LK + ++H V + GF
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSALMLCRVM 308
+ +R A++ Y KC M +A L E+ +VV+WT +I+G++ N A+ L M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+GV+PN + + +L+A +HA ++ E V TAL+D Y K
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ KVF K W+A+L+G+ AI++F ++ ++P+ TF+S+L
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 429 AVL-ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
A A + Q H + I+S L V+S L+ +Y+K G++ A +F
Sbjct: 505 AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLV 562
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y +HG A+ +F +M + V+ + +TF V AC+HAGLV+EG F M
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
++ +I P +H +C++DL RAGQL A +I MP +W +L AC H+ EL
Sbjct: 623 VRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTEL 682
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
G +AA ++PE++ YVLL+N+YA G W++ VR ++N ++K P S +EV++
Sbjct: 683 GRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Query: 668 E 668
+
Sbjct: 743 K 743
Score = 215 bits (548), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 260/539 (48%), Gaps = 19/539 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD P R S+ +++ + + GR +A LF+ + G+ + D + ++K + L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEM-DCSIFSSVLKVSATLC 107
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G +H K GF D V SL+ YM + + VFD MKE+ VV+W T+I+
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY RN+ +E L ++ RM + G +P+ T + L G +VH +V + G
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V N+++++Y+KCG +++A L ++ + VVTW ++I+GY NG AL + M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
L V+ + S AS++ C + L + + LH ++ + + TAL+ Y+KC
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 370 LSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ ++F + W A++SGF+ N EA+ LF +M K V+P+ T++ +L A
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
V++ +H ++++ + V + L+D Y K G + A +F+ I
Sbjct: 408 PVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID--DKDIVA 461
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL-VDEGLSLFKFM 547
Y + G E A+ +F ++ + G++PN+ TF+S+L+ C+ + +G F
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 548 LKQHQIIPLVDHYTCI----IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
+K +D C+ + + + G + A + + K + W +++ H
Sbjct: 522 IKSR-----LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 233/509 (45%), Gaps = 34/509 (6%)
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
A +FD + S+ +++ G+ R+ R +EA R++ + G+E DC+ SVL
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
L + GR++H + GF ++ V +++D Y+K K+ + +EM E +VVTWTTL
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
I+GY N L L M EG +PN + A+ L G G +H ++ L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+ + V +LI++Y KC + +F KT K WN+++SG+ N L EA+ +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M + V+ ++F S++ A L +L+ +HC +++ GFL+ + + L+ YSKC +
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A +F I G E AV LF++M + GV+PN+ T++ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK-EEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 529 HACS-------HAGLVDE--------GLSLFKFMLKQHQIIPLVDHYTCIID-------- 565
A HA +V G +L +K ++ ++ I D
Sbjct: 405 TALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 566 -LLGRA--GQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELE 619
L G A G+ A + + IKPN + ++L C + N +G+ F ++
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMGQGKQFHGFAIK 523
Query: 620 PENTGNYVL---LANLYAAVGRWRDAENV 645
+ + L +YA G AE V
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEV 552
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/583 (32%), Positives = 302/583 (51%), Gaps = 12/583 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R WN ++ Y + G DA LF+ M+ G + P T ++ C
Sbjct: 107 LFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS-PSATTLVNLLPFCGQCG 165
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
F+ G VHG+ K+G +LD+ V+N+L++ Y E A+++F MK+++ VSWNTMI
Sbjct: 166 FVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIG 225
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEKGFW 248
Y ++ EEA+ V+ M + VE T++++L A + E +H LV + G
Sbjct: 226 AYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-------HVSHEPLHCLVVKCGMV 278
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++ V +++ Y +CG + A L + +V T++++ Y GD A++
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+K + V++ +L C ++ G LH +AI+ L ++ +V LI MY+K +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPA 427
+F + + WN+++SG + + A ++F QM L + PD T SLL
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+ L L +H Y +R+ F V + L+D+Y+KCG+ A +F I
Sbjct: 459 CSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK--APCTA 516
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y G A+S + +M + G++P++ITF VL AC+H G VDEG F+ M
Sbjct: 517 TWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAM 576
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+K+ I P + HY ++ LLGRA +A LI M IKP+ AVWGALL AC+ H +E+
Sbjct: 577 IKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEV 636
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVN 650
GE AR F L+ +N G YVL++NLYA W D VR+M+
Sbjct: 637 GEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 248/528 (46%), Gaps = 20/528 (3%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
R L ++++++ + + +F +++ S LT P++FT I ++A + SF +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLT-PNHFTMSIFLQA-TTTSFNSFKLQ 68
Query: 137 VHGMTF---KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
V + K+G D +V+ SLL +Y+ G AQ++FD M E+ V WN +I GY R
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
N +A +++ M+ G P T+V++LP CG V GR VH + + G + V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
+NA++ Y KC ++ A L EM + V+W T+I Y +G A+ + + M + V
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
+ + V++ +LLSA S + LH ++ + +++ V T+L+ Y++C C + +
Sbjct: 249 EISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER 302
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
++ + +++S + + A+ F + ++ D +L +
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 493
+ M++H Y I+SG + V + L+ +YSK + +F L
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE--QLQETPLISWNSVI 420
Query: 494 XXYGKHGHGEMAVSLFNQ-MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
+ G A +F+Q M+ G+ P+ IT S+L CS ++ G L + L+ +
Sbjct: 421 SGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN- 479
Query: 553 IIPLVDHYTC--IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+++ C +ID+ + G A ++ +++ P A W +++
Sbjct: 480 --FENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISG 524
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 304/591 (51%), Gaps = 6/591 (1%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
S+ +WN +R V P ++L LF EM G P+NFT+P + KAC+ L+ + V
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFE-PNNFTFPFVAKACARLADVGCCEMV 74
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
H K+ F D FV + + M++ + A VF+ M E+ +WN M++G+ ++
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 257
++A ++ M + PD TV++++ + K+++L +HA+ G + V N
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 258 LDMYVKCGQMKEAWWLANEMDETD--VVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
+ Y KCG + A + +D D VV+W ++ Y + G+A A L +ML E KP
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
+L + +L ++C + +L G+ +H+ AI + ++ I MY+K + +F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 376 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
+ + W ++SG+ + EA+ LF M+ +PD T SL+ L+
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 436 QAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXX 494
I G + + + L+D+YSKCGS+ A IF+ P
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP--EKTVVTWTTMIA 432
Query: 495 XYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 554
Y +G A+ LF++M+ +PN ITF +VL AC+H+G +++G F M + + I
Sbjct: 433 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 492
Query: 555 PLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 614
P +DHY+C++DLLGR G+L +A LIR M KP+ +WGALL AC H NV++ E AA
Sbjct: 493 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAES 552
Query: 615 TFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
F LEP+ YV +AN+YAA G W +R ++ ++K P +S+++V
Sbjct: 553 LFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 13/411 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P+R +WN M+ + Q G A +LF EM + +T PD+ T +I++ S
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT-PDSVTVMTLIQSASFEK 167
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTM 187
L + +H + + G D+ V N+ ++ Y G+ + A+LVF+ + ++TVVSWN+M
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
Y A +A +Y M+ +PD +T +++ +C + + GR +H+ G
Sbjct: 228 FKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGT 287
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++ N + MY K A L + M V+WT +I+GY GD AL L
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA-IRQKLESEVIVETALIDMYAKCN 366
M+ G KP+LV++ SL+S CG FGSL GK + A A I V++ ALIDMY+KC
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ + +F T +K W +++G+ N + EA++LF +M+ D +P++ TF ++L
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 427 AYAVLADLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
A A L++ Y I G L+ S +VD+ + G L A
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPG----LDHYSCMVDLLGRKGKLEEA 514
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 119/261 (45%)
Query: 280 TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCL 339
+ V W I + D +L+L R M G +PN + + AC + + +
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 340 HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 399
HA I+ S+V V TA +DM+ KCN + + KVF + ++ WNA+LSGF +
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 400 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASIL 459
+A LF++M + ++ PD+ T +L+ + + LK +H IR G ++ VA+
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 460 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 519
+ Y KCG L A +F I Y G A L+ M++ +P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 520 NQITFTSVLHACSHAGLVDEG 540
+ TF ++ +C + + +G
Sbjct: 255 DLSTFINLAASCQNPETLTQG 275
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + R+ SW M+ Y + G +AL LF MI SG PD T +I C
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG-EKPDLVTLLSLISGCGKFG 371
Query: 130 FLDMGVGVHGMTFKAGFDLD-TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L+ G + G D + N+L+ MY G +A+ +FD E+TVV+W TMI
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGF 247
GY N EAL+++++M+D +P+ T ++VL AC ++E G E ++K+
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 291
+ + M+D+ + G+++EA L M + D W L+N
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 306/593 (51%), Gaps = 53/593 (8%)
Query: 113 PDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 172
P+ FT+P ++K+C+ L + G +H K GF +D F +L++MYM + A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 173 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 232
D M E+ + S N ++G N +A R++ +G + TV SVL CG ++
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DI 145
Query: 233 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTL 288
E G ++H L + GF + V +++ MY +CG+ W LA M E VVT+
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE----WVLAARMFEKVPHKSVVTYNAF 201
Query: 289 INGYILNGD---ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
I+G + NG S L R E +PN V+ + ++AC S +L YG+ LH ++
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 346 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNSLVREAIQ 404
++ + E +V TALIDMY+KC C +Y VF + R WN+++SG + N A++
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 405 LFKQMLVKDVQPDNATFNSLLPAYAVLAD------------------------------- 433
LF+++ + ++PD+AT+NSL+ ++ L
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS 379
Query: 434 ----LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
LK IH ++I++ + V + L+D+Y KCG +A IF+
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
YGKHG E A+ +F + + V+P+ TFT+VL ACSH G V++G +F+ M +
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 609
++ P +H C+IDLLGR+G+L +A +I M + +LLG+C H + LGE
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGE 558
Query: 610 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSL 662
AA ELEPEN +V+L+++YAA+ RW D E++R +++ L KLP SL
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 113/215 (52%), Gaps = 8/215 (3%)
Query: 70 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
LF+ L L +WN+++ + Q+G+ +A F M+ S + +P ++ AC
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLKCLTSLLSAC 378
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM--KEQTVVS 183
SD+ L G +HG KA + D FV SL+ MYM G A+ +FD K + V
Sbjct: 379 SDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF 438
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
WN MI+GY ++ E A+ ++ + + VEP AT +VL AC NVE G ++ L++
Sbjct: 439 WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQ 498
Query: 244 EK-GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
E+ G+ + M+D+ + G+++EA + ++M
Sbjct: 499 EEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 296/562 (52%), Gaps = 4/562 (0%)
Query: 96 HDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNS 155
++A EM +G+++ +++Y + +AC +L L G +H + +QN
Sbjct: 65 NEAFEFLQEMDKAGVSV-SSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 156 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 215
+L MY E A +FD M E VS TMI+ Y ++A+ +++ M+ +G +P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 216 CATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 275
+ ++L + + ++ GR++HA V G N + +++MYVKCG + A + +
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 276 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
+M V T L+ GY G AR AL L ++ EGV+ + + +L AC S LN
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
GK +HA + LESEV V T L+D Y KC+ + + F + + W+A++SG+
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 396 NSLVREAIQLFKQMLVKDVQPDNA-TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
S EA++ FK + K+ N+ T+ S+ A +VLAD +H I+ +
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
S L+ +YSKCG L A+ +F + Y +G+ A+ LF +MV
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY--YGNASEALRLFEKMVS 481
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
G++PN +TF +VL ACSHAGLV++G ML+++ + P +DHY C+ID+ R+G L+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 575 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 634
+A ++ MP +P+ W L C +H+N+ELGE+A +L+PE+T YVL NLY
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 635 AVGRWRDAENVRDMVNVVGLRK 656
G+W +A + ++N L+K
Sbjct: 602 WAGKWEEAAEMMKLMNERMLKK 623
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 7/416 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + + + S TM+ Y + G A+ LF M+ SG P + Y ++K+ +
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM-YTTLLKSLVNPR 198
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
LD G +H +AG +T ++ ++ MY+ G A+ VFD M + V+ ++
Sbjct: 199 ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMV 258
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + RA +AL+++ ++ GVE D VL AC L+ + LG+++HA V + G
Sbjct: 259 GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V ++D Y+KC + A E+ E + V+W+ +I+GY A+ + +
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 310 LEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ N + S+ AC N G +HA AI++ L E+ALI MY+KC C
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ + +VF W A +SG + EA++LF++M+ ++P++ TF ++L A
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 429 AVLADLKQAMNIHCY---LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ ++Q HC L + ++ ++DIY++ G L A +P
Sbjct: 499 SHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPF 552
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 170/334 (50%), Gaps = 7/334 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + + +M Y Q GR DAL LFV+++ G+ D+F + +++KAC+ L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW-DSFVFSVVLKACASLE 299
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L++G +H K G + + V L+ Y+ E A F ++E VSW+ +I+
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEP-DCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY + ++ EEA++ + + + T S+ AC +L + +G +VHA ++
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
G+ +A++ MY KCG + +A + MD D+V WT I+G+ G+A AL L M
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+ G+KPN V+ ++L+AC G + GK CL + + + +ID+YA+
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 368 GNLSYKVFMKTS--KKRTAPWNALLSG-FIHNSL 398
+ + K FMK + W LSG + H +L
Sbjct: 540 LDEALK-FMKNMPFEPDAMSWKCFLSGCWTHKNL 572
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 185/407 (45%), Gaps = 5/407 (1%)
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
++ + EA M AGV + + AC L+++ GR +H ++ +++
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
++N +L MY +C +++A L +EM E + V+ TT+I+ Y G A+ L ML G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
KP +LL + + +L++G+ +HA IR L S +ET +++MY KC +
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
+VF + + K+ L+ G+ R+A++LF ++ + V+ D+ F+ +L A A L
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
+L IH + + G + V + LVD Y KC S A F I
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI--REPNDVSWSAI 357
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQP-NQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
Y + E AV F + N T+TS+ ACS + G + +K+
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR- 416
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+I + +I + + G L+DA + +M P+ W A +
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISG 462
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/510 (34%), Positives = 265/510 (51%), Gaps = 35/510 (6%)
Query: 156 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 215
L+ Y + + A+ VFD + E+ V+ N MI Y N E ++V+ M V PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 216 CATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 275
T VL AC + +GR++H + G + V N ++ MY KCG + EA + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 276 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
EM DVV+W +L+ GY N AL +CR M + + ++ASLL A + + N
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
MY K +F K KK WN ++ ++
Sbjct: 260 -------------------------MYVK--------DMFFKMGKKSLVSWNVMIGVYMK 286
Query: 396 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 455
N++ EA++L+ +M +PD + S+LPA + L IH Y+ R + L +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 456 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 515
+ L+D+Y+KCG L A +F + YG G G AV+LF+++ S
Sbjct: 347 ENALIDMYAKCGCLEKARDVFE--NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 516 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLND 575
G+ P+ I F + L ACSHAGL++EG S FK M ++I P ++H C++DLLGRAG++ +
Sbjct: 405 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 464
Query: 576 AYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 635
AY I+ M ++PN VWGALLGAC H + ++G +AA F+L PE +G YVLL+N+YA
Sbjct: 465 AYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524
Query: 636 VGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
GRW + N+R+++ GL+K P S VEV
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 198/413 (47%), Gaps = 43/413 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R++ N M+R YV G + + +F M + PD++T+P ++KACS
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR-PDHYTFPCVLKACSCSG 154
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G +HG K G FV N L++MY G +A+LV D M + VVSWN+++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +N R ++AL V M + D T+ S+LPA
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV----------------------S 252
Query: 250 NMVVRNAML--DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
N N M DM+ K G+ +V+W +I Y+ N A+ L
Sbjct: 253 NTTTENVMYVKDMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M +G +P+ VS+ S+L ACG +L+ GK +H + R+KL +++E ALIDMYAKC C
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ VF + W A++S + + +A+ LF ++ + PD+ F + L A
Sbjct: 360 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAA 419
Query: 428 YAVLADLKQAMNIHCYLIRSG---FLYRLEVASILVDIYSKCGSLGYAHHIFN 477
+ L++ + C+ + + RLE + +VD+ + G + A+
Sbjct: 420 CSHAGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 3/236 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + ++SL SWN M+ +Y++ P +A+ L+ M G PD + ++ AC D S
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE-PDAVSITSVLPACGDTS 323
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G +HG + + ++N+L+ MY G E+A+ VF+ MK + VVSW MI+
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFW 248
Y + R +A+ +++++ D+G+ PD V+ L AC +E GR L+ +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 303
+ M+D+ + G++KEA+ +M E + W L+ ++ D L+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 156/363 (42%), Gaps = 37/363 (10%)
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
R VH+ + + N + ++ Y + A + +E+ E +V+ +I Y+ N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
G + + M V+P+ + +L AC G++ G+ +H A + L S + V
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
L+ MY KC + + V + S++ WN+L+ G+ N +A+++ ++M +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
D T SLLPA + + M + + G L ++++ +Y K
Sbjct: 239 HDAGTMASLLPAVSNTT-TENVMYVKDMFFKMG-KKSLVSWNVMIGVYMK---------- 286
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
N +P+ AV L+++M G +P+ ++ TSVL AC
Sbjct: 287 -NAMPVE----------------------AVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 595
+ G + + +++ ++IP + +ID+ + G L A ++ M + + W A+
Sbjct: 324 ALSLGKKIHGY-IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAM 381
Query: 596 LGA 598
+ A
Sbjct: 382 ISA 384
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/550 (33%), Positives = 297/550 (54%), Gaps = 9/550 (1%)
Query: 118 YPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEK-EQAQLVFDLM 176
Y +++ C+ + G+ H K+G + D V NSLL++Y G + + VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 177 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 236
+ +SW +M++GY +AL V+ M+ G++ + T+ S + AC L V LGR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
H +V GF N + + + +Y + +A + +EM E DV+ WT +++ + N
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 297 DARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
AL L M +G+ P+ + ++L+ACG+ L GK +H I + S V+VE
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
++L+DMY KC + +VF SKK + W+ALL G+ N +AI++F++M KD+
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY 363
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
F ++L A A LA ++ IH +R G + V S L+D+Y K G + A +
Sbjct: 364 ----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
++ + + ++G GE AVS FN MV+ G++P+ I+F ++L AC H G
Sbjct: 420 YSKMSIRNMITWNAMLSAL--AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 595
+VDEG + F M K + I P +HY+C+IDLLGRAG +A NL+ + + ++WG L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 596 LGACVSHENV-ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGL 654
LG C ++ + + E A+ ELEP+ +YVLL+N+Y A+GR DA N+R ++ G+
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 655 RKLPAQSLVE 664
K QS ++
Sbjct: 598 AKTVGQSWID 607
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 215/401 (53%), Gaps = 9/401 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPH-DALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+FD + SW +MM YV G+ H AL +FVEM+ GL + FT +KACS+L
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVT-GKEHVKALEVFVEMVSFGLD-ANEFTLSSAVKACSEL 176
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ +G HG+ GF+ + F+ ++L +Y E A+ VFD M E V+ W ++
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVL 236
Query: 189 NGYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+ + +N+ EEAL ++ M G+ PD +T +VL ACG L+ ++ G+E+H + G
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
N+VV +++LDMY KCG ++EA + N M + + V+W+ L+ GY NG+ A+ + R
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M + +L ++L AC ++ GK +H +R+ VIVE+ALID+Y K C
Sbjct: 357 M----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ + +V+ K S + WNA+LS N EA+ F M+ K ++PD +F ++L A
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 428 YAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCG 467
+ + N + +S G E S ++D+ + G
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAG 513
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 190/387 (49%), Gaps = 18/387 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+ + W ++ + + +AL LF M +PD T+ ++ AC +L
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G +HG G + V++SLL MY G +A+ VF+ M ++ VSW+ ++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +N E+A+ ++ M E D +VL AC L V LG+E+H +G +G
Sbjct: 340 GYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N++V +A++D+Y K G + A + ++M +++TW +++ NG A+ M+
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGK-----CLHAWAIRQKLESEVIVETALIDMYAK 364
+G+KP+ +S ++L+ACG G ++ G+ ++ I+ E + +ID+ +
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH----YSCMIDLLGR 511
Query: 365 CNCGNLSYKVFMKTSKKRTAP-WNALLSGFIHNS-LVREAIQLFKQMLVKDVQPD-NATF 421
+ + + + A W LL N+ R A ++ K+M+ +++P + ++
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMM--ELEPKYHMSY 569
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSG 448
L Y + A+NI ++R G
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRG 596
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 186/402 (46%), Gaps = 10/402 (2%)
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 258
EA+R+ N + + S+L C + + G + HA V + G + V N++L
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 259 DMYVKCGQ-MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNL 317
+Y K G M+E + + D ++WT++++GY+ + AL + M+ G+ N
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 318 VSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK 377
+++S + AC G + G+C H I E + + L +Y + +VF +
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 378 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPAYAVLADLKQ 436
+ W A+LS F N L EA+ LF M K + PD +TF ++L A L LKQ
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
IH LI +G + V S L+D+Y KCGS+ A +FN + Y
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWSALLGGY 341
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL 556
++G E A+ +F +M + + F +VL AC+ V G + +++ +
Sbjct: 342 CQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV 397
Query: 557 VDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ + +IDL G++G ++ A + M I+ N W A+L A
Sbjct: 398 IVE-SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 319/597 (53%), Gaps = 23/597 (3%)
Query: 70 LFDTLPQRSLFS-WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+FD +P+R + WN M+ + G ++ LF EM G+ D F + I+ C D
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR-HDKFGFATILSMC-DY 202
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD----LMKEQTVVSW 184
LD G VH + KAGF + + V N+L+ MY N A LVF+ +++Q V++
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ--VTF 260
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 244
N +I+G R +E+L V+ +M++A + P T VSV+ +C +G +VH L +
Sbjct: 261 NVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIK 316
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
G+ +V NA + MY A + ++E D+VTW T+I+ Y +SA+ +
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
+ M + GVKP+ + SLL+ L + + A I+ L S++ + ALI Y+K
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ--PDNATFN 422
+ +F ++ +K WNA++SGF HN E ++ F +L +V+ PD T +
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLS 493
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
+LL + L H Y++R G + + L+++YS+CG++ + +FN +
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN--QMS 551
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGL 541
Y +HG GE AV+ + M G V P+ TF++VL ACSHAGLV+EGL
Sbjct: 552 EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGL 611
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR--TMPIKPNHAVWGALLGAC 599
+F M++ H +I VDH++C++DLLGRAG L++A +L++ I VW AL AC
Sbjct: 612 EIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSAC 671
Query: 600 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
+H +++LG++ A+ E E ++ YV L+N+YA G W++AE R +N++G K
Sbjct: 672 AAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMK 728
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 151/642 (23%), Positives = 266/642 (41%), Gaps = 86/642 (13%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDLSFLDMGVG 136
+L + N + + G +AL LF + +H TL PD ++ + I L G
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFAD-VHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
VH ++G + V N+LL++Y G + FD + E V SW T+++ F+
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 197 AEEALRVYNRMMDA--------------------------------GVEPDCATVVSVLP 224
E A V+++M + GV D ++L
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 225 ACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET--DV 282
C +++ G++VH+LV + GF+ V NA++ MY C + +A + E D D
Sbjct: 199 MCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 283 VTWTTLINGYILNGDARS-ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
VT+ +I+G L G R +L++ R ML ++P ++ S++ +C G +H
Sbjct: 258 VTFNVVIDG--LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHG 312
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 401
AI+ E +V A + MY+ ++KVF +K WN ++S + L +
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 461
A+ ++K+M + V+PD TF SLL A DL + +I+ G ++E+++ L+
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALIS 429
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ--P 519
YSK G + A +F L Y +G + F+ +++S V+ P
Sbjct: 430 AYSKNGQIEKADLLFE-RSLRKNLISWNAIISGFY-HNGFPFEGLERFSCLLESEVRILP 487
Query: 520 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII------PLVDHYT------------ 561
+ T +++L C + G ++L+ Q L++ Y+
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 562 ------------CIIDLLGRAGQLNDAYNLIRTM----PIKPNHAVWGALLGACVSHENV 605
+I R G+ +A N +TM + P+ A + A+L AC V
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 606 ELGEVAARWTFELEP--ENTGNYVLLANLYAAVGRWRDAENV 645
E G E N ++ L +L G +AE++
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESL 649
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 300/615 (48%), Gaps = 42/615 (6%)
Query: 93 GRPHDALNLFVEM-IHSGLTLPDNF---TYPIIIKACSDLSFLDMGVGVHGMTFKAGFDL 148
G HDA F + + S + D+ + ++ AC D+ GV VH +G +
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEY 76
Query: 149 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 208
+ + L+ Y +AQ + + + WN +I Y +N EE + Y RM+
Sbjct: 77 HSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV 136
Query: 209 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 268
G+ PD T SVL ACG +V GR VH ++ + ++ V NA++ MY + M
Sbjct: 137 SKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMG 196
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS--------- 319
A L + M E D V+W +IN Y G A L M GV+ ++++
Sbjct: 197 IARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCL 256
Query: 320 -----VASL---------------------LSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
V +L L AC G++ GK +H AI +
Sbjct: 257 QTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDN 316
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
V LI MY+KC + VF +T + WN+++SG+ + EA L ++MLV
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYA 472
QP++ T S+LP A +A+L+ HCY++R F + + LVD+Y+K G + A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
+ ++ + YG G G +A++LF +M +SG++P+ +T +VL ACS
Sbjct: 437 KQVSDL--MSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACS 494
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 592
H+ LV EG LF M ++ I P + H++C++DL GRAG L A ++I MP KP+ A W
Sbjct: 495 HSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATW 554
Query: 593 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
LL AC H N ++G+ AA E++PEN G YVL+AN+YAA G W VR ++ +
Sbjct: 555 ATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDL 614
Query: 653 GLRKLPAQSLVEVRS 667
G++K P + ++ S
Sbjct: 615 GVKKDPGCAWIDTDS 629
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 153/293 (52%), Gaps = 35/293 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLP---------------- 113
LFD + +R SWN ++ Y G +A LF +M SG+ +
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 114 ------------------DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNS 155
D I +KACS + + +G +HG+ + +D V+N+
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT 320
Query: 156 LLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPD 215
L+ MY + A +VF +E ++ +WN++I+GY + N++EEA + M+ AG +P+
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 216 CATVVSVLPACGLLKNVELGREVHA-LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
T+ S+LP C + N++ G+E H +++ K F ++ N+++D+Y K G++ A ++
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVS 440
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC 327
+ M + D VT+T+LI+GY G+ AL L + M G+KP+ V+V ++LSAC
Sbjct: 441 DLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSAC 493
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + SL +WN+++ Y Q+ + +A +L EM+ +G P++ T I+ C+ ++
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ-PNSITLASILPLCARIA 395
Query: 130 FLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L G H + F T + NSL+ +Y +G+ A+ V DLM ++ V++ ++I
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLI 455
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGF 247
+GY AL ++ M +G++PD TVV+VL AC K V G + ++ E G
Sbjct: 456 DGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGI 515
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCR 306
+ + M+D+Y + G + +A + + M + TW TL+N ++G+ +
Sbjct: 516 RPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAE 575
Query: 307 VMLLEGVKPN----LVSVASLLSACGSFGSL 333
+L +KP V +A++ +A GS+ L
Sbjct: 576 KLL--EMKPENPGYYVLIANMYAAAGSWSKL 604
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 301/601 (50%), Gaps = 40/601 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF + P ++ SWN ++ Y + G +A NLF EM G+ P+ +T +++ C+ L
Sbjct: 81 LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK-PNEYTLGSVLRMCTSLV 139
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTMI 188
L G +HG T K GFDLD V N LLAMY +A+ +F+ M+ E+ V+W +M+
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSML 199
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY +N A +A+ + + G + + T SVL AC + +G +VH + + GF
Sbjct: 200 TGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFK 259
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N+ V++A++DMY KC +M+ A L M+ DVV+W ++I G + G AL + M
Sbjct: 260 TNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 309 LLEGVKPNLVSVASLLSACG-SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+K + ++ S+L+ S + H ++ + +V AL+DMYAK
Sbjct: 320 HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ + KVF +K W AL++G HN EA++LF M V + PD S+L A
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
A L L+ +H I+SGF L V + LV +Y+KCGSL A+ IFN + +
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----- 494
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+ IT+T ++ + GL+++ F M
Sbjct: 495 --------------------------------DLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+ I P +HY C+IDL GR+G L+ M ++P+ VW A+L A H N+E
Sbjct: 523 RTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIEN 582
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
GE AA+ ELEP N YV L+N+Y+A GR +A NVR ++ + K P S VE +
Sbjct: 583 GERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKG 642
Query: 668 E 668
+
Sbjct: 643 K 643
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 310/600 (51%), Gaps = 9/600 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL--PDNFTYPIIIKACSD 127
+FD +P R++ S+N + Y + P A F H P++ T+ +++ C+
Sbjct: 154 VFDKMPHRNVVSYNALYSAYSR--NPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAV 211
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L + MG ++ K G+ + VQ S+L MY + G+ E A+ +FD + + V+WNTM
Sbjct: 212 LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTM 271
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I G +N++ E+ L + M+ +GV+P T VL C L + LG+ +HA +
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++ + NA+LDMY CG M+EA+++ + ++V+W ++I+G NG A+++ R
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRR 391
Query: 308 ML-LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
+L + +P+ + ++ +SA +GK LH + E V V T L+ MY K
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ KVF ++ W ++ G A+Q F +M + + D + +S++
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIG 511
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A + +A L+Q HC IR+GF + V LVD+Y K G A IF++
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLAS--NPDL 569
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
Y +HG E A+S F Q++++G P+ +T+ S+L ACSH G +G L+
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ 629
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA-VWGALLGACVSHENV 605
M K+ I HY+C+++L+ +AG +++A LI P N A +W LL ACV+ N+
Sbjct: 630 M-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNL 688
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
++G AA +L+PE+T ++LL+NLYA GRW D +R + + K P S +EV
Sbjct: 689 QIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEV 748
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 270/550 (49%), Gaps = 20/550 (3%)
Query: 70 LFDTLPQR---SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIII---K 123
+FD +PQR +LF + + YV MG + + + +P N ++ +
Sbjct: 44 VFDKMPQRNIVTLFGLSAVFE-YVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTR 102
Query: 124 ACSDLSFLDMGVGVHGMTFKAGFDLDT---FVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 180
C ++ L +H + AG T + N+L++MY+ G EQA+ VFD M +
Sbjct: 103 KCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRN 162
Query: 181 VVSWNTMINGYFRN-NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
VVS+N + + Y RN + A A + M V+P+ +T S++ C +L++V +G ++
Sbjct: 163 VVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 299
+ + + G+ N+VV+ ++L MY CG ++ A + + ++ D V W T+I G + N
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 300 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
LM R ML+ GV P + + +L+ C GS + GK +HA I +++ ++ AL+
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALL 342
Query: 360 DMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQP 416
DMY C+CG++ ++ VF + WN+++SG N +A+ +++++L + +P
Sbjct: 343 DMY--CSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
D TF++ + A A +H + + G+ + V + L+ +Y K A +F
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
++ + + + G+ E+AV F +M + + + + +SV+ ACS +
Sbjct: 461 DV--MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ +G +F + + ++ ++D+ G+ G+ A I ++ P+ W ++L
Sbjct: 519 LRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSML 576
Query: 597 GACVSHENVE 606
GA H VE
Sbjct: 577 GAYSQHGMVE 586
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 158/357 (44%), Gaps = 18/357 (5%)
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL--INGYILNGDARSALML----CRVM 308
N ++ MYV+C +++A + ++M + ++VT L + Y+ G + + ++ +++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA---LIDMYAKC 365
+ SV L C S L + +HA + + A LI MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHN-SLVREAIQLFKQMLVKDVQPDNATFNSL 424
+ KVF K + +NAL S + N A L M + V+P+++TF SL
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
+ AVL D+ +++ +I+ G+ + V + ++ +YS CG L A IF+ +
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
K+ E + F M+ SGV P Q T++ VL+ CS G G +
Sbjct: 266 VAWNTMIVGSL--KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 545 KFMLKQHQI--IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 599
++ + +PL + ++D+ G + +A+ + + PN W +++ C
Sbjct: 324 ARIIVSDSLADLPLDN---ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGC 376
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/606 (31%), Positives = 301/606 (49%), Gaps = 36/606 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ L R + S N ++ + G +A + +M PD T I C DLS
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 130 FLDMGVGVHGMTFKAGFDLDTF-VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
F G VHG T + V NS++ MY G QA+L+F + +VSWN+MI
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCA-----TVVSVLPACGLLKNVELGREVHALVK 243
+ + +N +A ++ ++ E C+ TV+++L +C ++ G+ VH ++
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVS---EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ 524
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSAL 302
K G + A+ M ET D+ +W ++I+G +G +L
Sbjct: 525 -------------------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 303 MLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
+ M EG ++ +L+++ +SA G+ G + G+C H AI+ E + ++ LI M
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
Y +C + KVF S WN ++S N RE QLF+ + ++P+ TF
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITF 682
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
LL A L M HC+LIR GF V++ LVD+YS CG L +F +
Sbjct: 683 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV 742
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSVLHACSHAGLVDEG 540
+G HG GE A+ LF ++ S ++PN+ +F S+L ACSH+G +DEG
Sbjct: 743 NSISAWNSVISA--HGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
LS +K M ++ + P+ +H I+D+LGRAG+L +AY I + VWGALL AC
Sbjct: 801 LSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACN 860
Query: 601 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQ 660
H + +LG+ A FE+EP+N Y+ LAN Y +G W +A +R MV L+KLP
Sbjct: 861 YHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGY 920
Query: 661 SLVEVR 666
S+++VR
Sbjct: 921 SVIDVR 926
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 145/581 (24%), Positives = 256/581 (44%), Gaps = 88/581 (15%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD L ++ + WN+M+ Q GR A+ LF+EMIH G D+ T + A S L
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF-DSTTLLLAASALSSLH 202
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+H + + G D+ + N+L+ +Y A+ VF M+ + +VSWNT++
Sbjct: 203 LSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT 262
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW- 248
N ++L+ + M +G E D T V+ AC ++ + LG +H LV + G+
Sbjct: 263 KCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 249 -GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL-MLCR 306
++ V N+++ MY KCG + A + E+ DV++ ++NG+ NG A +L +
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI-VETALIDMYAKC 365
+ ++ ++P++ +V S+ S CG G+ +H + +R +++S + V ++IDMY KC
Sbjct: 383 MQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ +F T+ + WN+++S F N +A LFK++ V + + SL
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV----VSEYSCSKFSLS 498
Query: 426 PAYAVLADLKQA------MNIHCYL-----IRSGFLYRLEVASILVD------IYSKCGS 468
A+L + ++HC+L + S FL RLE S D + S C S
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL-RLETMSETRDLTSWNSVISGCAS 557
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSV 527
G HH+ ++ F M + G ++ + IT
Sbjct: 558 SG--HHL----------------------------ESLRAFQAMSREGKIRHDLITLLGT 587
Query: 528 LHACSHAGLVDEGLSLFKFMLK---------QHQII---------------------PLV 557
+ A + GLV +G +K Q+ +I P +
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNL 647
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ C+I L + + + L R + ++PN + LL A
Sbjct: 648 CSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 206/471 (43%), Gaps = 28/471 (5%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
VH K G D + LL Y GE + +FD +KE+ V+ WN+MI +N R
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
A+ ++ M+ G E D T++ A L +H L E G G+ + NA
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
++++Y K + A + M+ D+V+W T++ + NG R +L + M G + +
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKL--ESEVIVETALIDMYAKCNCGNLSYKV 374
V+ + ++SAC S L G+ LH I+ E+ V V ++I MY+KC + V
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 375 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLAD 433
F + + NA+L+GF N + EA + QM V +QPD AT S+ L+
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 434 LKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
++ +H Y +R R LEV + ++D+Y KCG A +F
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTT--HRDLVSWNSM 466
Query: 493 XXXYGKHGHGEMAVSLFNQMVQ--SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 550
+ ++G A +LF ++V S + + T ++L +C + + G S+ ++ K
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK- 525
Query: 551 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 601
G L A+ + TM + W +++ C S
Sbjct: 526 -------------------LGDLTSAFLRLETMSETRDLTSWNSVISGCAS 557
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 165/380 (43%), Gaps = 6/380 (1%)
Query: 222 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 281
VL + + E R VH + G ++ + +L Y + G++ + L +E+ E D
Sbjct: 93 VLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKD 152
Query: 282 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
V+ W ++I NG +A+ L M+ +G + + ++ SA S LH
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 401
AI L + + AL+++YAK + + VF + WN +++ + N R+
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL--YRLEVASIL 459
++Q FK M + D TF+ ++ A + + +L ++H +I+SG+ + V + +
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 460 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQ 518
+ +YSKCG A +F L + +G E A + NQM +Q
Sbjct: 333 ISMYSKCGDTEAAETVFE--ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQ 390
Query: 519 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 578
P+ T S+ C EG ++ + ++ ++ +ID+ G+ G A
Sbjct: 391 PDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 579 LIRTMPIKPNHAVWGALLGA 598
L +T + + W +++ A
Sbjct: 451 LFKTTTHR-DLVSWNSMISA 469
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 294/606 (48%), Gaps = 19/606 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-IHSGLTLPDNFTYPIIIKACSDL 128
+FD +P + SW ++++ YV +AL LF M + PD +++KAC
Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
S + G +H K +V +SLL MY G+ +++ VF M + V+W +I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G R +E L ++ M + D T L AC L+ V+ G+ +H V +GF
Sbjct: 182 TGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV 241
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V N++ MY +CG+M++ L M E DVV+WT+LI Y G A+ M
Sbjct: 242 TTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM 301
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
V PN + AS+ SAC S L +G+ LH + L + V +++ MY+ CG
Sbjct: 302 RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYS--TCG 359
Query: 369 NL-SYKVFMKTSKKR-TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
NL S V + + R W+ ++ G+ E + F M +P + SLL
Sbjct: 360 NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLS 419
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF------NIIP 480
+A ++ +H + G V S L+++YSKCGS+ A IF +I+
Sbjct: 420 VSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS 479
Query: 481 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 540
L Y +HG + A+ LF + ++ G +P+ +TF SVL AC+H+G +D G
Sbjct: 480 L--------TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
F M + + + P +HY C++DLL RAG+L+DA +I M K + VW LL AC
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 601 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQ 660
+ ++E G AA EL+P V LAN+Y++ G +A NVR + G+ K P
Sbjct: 592 AKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGW 651
Query: 661 SLVEVR 666
S ++++
Sbjct: 652 SSIKIK 657
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/544 (24%), Positives = 237/544 (43%), Gaps = 44/544 (8%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYN--RMM 208
F NS L +NAG A+ VFD M +VSW ++I Y N ++EAL +++ R++
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 209 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 268
D V PD + + VL ACG N+ G +HA + ++ V +++LDMY + G++
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 328
++ + +EM + VTWT +I G + G + L M + + A L AC
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 329 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
+ YGK +H I + + + V +L MY +C +F S++ W +
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
L+ + +A++ F +M V P+ TF S+ A A L+ L +HC ++ G
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
L V++ ++ +YS CG+L A +F + Y + G GE
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQ--GMRCRDIISWSTIIGGYCQAGFGEEGFKY 398
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK----FMLKQHQII--PLVDHY-- 560
F+ M QSG +P S+L + +++ G + F L+Q+ + L++ Y
Sbjct: 399 FSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSK 458
Query: 561 ----------------------TCIIDLLGRAGQLNDAYNLIR---TMPIKPNHAVWGAL 595
T +I+ G+ +A +L + +P+ + ++
Sbjct: 459 CGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 596 LGACVSHENVELG---EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
L AC ++LG + T+ + P +Y + +L GR DAE M+N +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKE-HYGCMVDLLCRAGRLSDAEK---MINEM 574
Query: 653 GLRK 656
+K
Sbjct: 575 SWKK 578
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/639 (28%), Positives = 329/639 (51%), Gaps = 45/639 (7%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS- 129
FD + + + SWN ++ + + DA F M+ T P+ T ++ C+ +
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP-TEPNYATIANVLPVCASMDK 239
Query: 130 --FLDMGVGVHGMTF-KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
G +H ++ FV NSL++ Y+ G E+A +F M + +VSWN
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 187 MINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHA-LVKE 244
+I GY N +A ++++ ++ G V PD T++S+LP C L ++ G+E+H+ +++
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
+ V NA++ Y + G A+W + M D+++W +++ + + L L
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL---ESEVIVETALIDM 361
+L E + + V++ SLL C + + K +H ++++ L E E + AL+D
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 362 YAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNS----------------------L 398
YAKC ++K+F+ S++RT +N+LLSG++++ +
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 399 VR---------EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
VR EAI +F+++ + ++P+ T +LLP A LA L H Y+IR G
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG- 598
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 509
L + + L+D+Y+KCGSL +A+ +F Y HG G+ A+ ++
Sbjct: 599 LGDIRLKGTLLDVYAKCGSLKHAYSVFQ--SDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 510 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 569
+ M +S ++P+ + T++L AC HAGL+ +GL ++ + H + P ++ Y C +DL+ R
Sbjct: 657 SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIAR 716
Query: 570 AGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLL 629
G+L+DAY+ + MP++PN +WG LL AC ++ ++LG A + E ++TGN+VL+
Sbjct: 717 GGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLI 776
Query: 630 ANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+N+YAA +W +R+++ ++K S +EV +
Sbjct: 777 SNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQ 815
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 206/406 (50%), Gaps = 13/406 (3%)
Query: 82 WNTMMR-MYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
WN ++ + V GR + + F M + P + T+ I++ C L G +H
Sbjct: 90 WNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEK-EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 199
KAG + DT V N+L++MY G A FD + ++ VVSWN +I G+ NN +
Sbjct: 148 IIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMAD 207
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLL-KNVEL--GREVHALVKEKGFWGNMV-VRN 255
A R + M+ EP+ AT+ +VLP C + KN+ GR++H+ V ++ + V V N
Sbjct: 208 AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCN 267
Query: 256 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VK 314
+++ Y++ G+++EA L M D+V+W +I GY N + A L ++ +G V
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS 327
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMYAKCNCGNLSYK 373
P+ V++ S+L C L GK +H++ +R L + V ALI YA+ + +Y
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYW 387
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
F S K WNA+L F + + + L +L + + D+ T SLL +
Sbjct: 388 AFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQG 447
Query: 434 LKQAMNIHCYLIRSGFLYRLE---VASILVDIYSKCGSLGYAHHIF 476
+ + +H Y +++G L+ E + + L+D Y+KCG++ YAH IF
Sbjct: 448 IGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF 493
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 181/374 (48%), Gaps = 9/374 (2%)
Query: 114 DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 173
D+ + ++KAC+ +S L G +HG FK G + V S+L MY + Q +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 174 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNV 232
M V WN ++ G + E +R + M A +P T VLP C L +
Sbjct: 80 RQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 233 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM-KEAWWLANEMDETDVVTWTTLING 291
G+ +H+ + + G + +V NA++ MY K G + +A+ + + + DVV+W +I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 292 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG---SLNYGKCLHAWAI-RQK 347
+ N A +ML E +PN ++A++L C S + G+ +H++ + R
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
L++ V V +L+ Y + + +F + K WN +++G+ N +A QLF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 408 QMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSK 465
++ K DV PD+ T S+LP A L DL IH Y++R +L V + L+ Y++
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 466 CGSLGYAHHIFNII 479
G A+ F+++
Sbjct: 379 FGDTSAAYWAFSLM 392
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 209/450 (46%), Gaps = 40/450 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF + + L SWN ++ Y A LF ++H G PD+ T I+ C+ L+
Sbjct: 285 LFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLT 344
Query: 130 FLDMGVGVHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L G +H + + L DT V N+L++ Y G+ A F LM + ++SWN ++
Sbjct: 345 DLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAIL 404
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ + + + + L + + +++ + D T++S+L C ++ + +EVH + G
Sbjct: 405 DAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLL 464
Query: 249 GNM---VVRNAMLDMYVKCGQMK--------------------------------EAWWL 273
+ + NA+LD Y KCG ++ +A L
Sbjct: 465 HDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML 524
Query: 274 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 333
EM TD+ TW+ ++ Y + A+ + R + G++PN V++ +LL C SL
Sbjct: 525 FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASL 584
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 393
+ + H + IR L ++ ++ L+D+YAKC +Y VF +++ + A+++G+
Sbjct: 585 HLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGY 643
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS--GFLY 451
+ +EA+ ++ M +++PD+ ++L A ++ + I+ IR+ G
Sbjct: 644 AVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY-DSIRTVHGMKP 702
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+E + VD+ ++ G L A+ +P+
Sbjct: 703 TMEQYACAVDLIARGGRLDDAYSFVTQMPV 732
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 179/404 (44%), Gaps = 13/404 (3%)
Query: 203 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV 262
V N + +G D + V+ AC + ++ GR +H V + G V ++L+MY
Sbjct: 8 VQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYA 67
Query: 263 KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVAS 322
KC +M + + +MD D V W ++ G ++ + + + KP+ V+ A
Sbjct: 68 KCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAI 127
Query: 323 LLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL---SYKVFMKTS 379
+L C G GK +H++ I+ LE + +V AL+ MYAK G + +Y F +
Sbjct: 128 VLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAK--FGFIFPDAYTAFDGIA 185
Query: 380 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD---LKQ 436
K WNA+++GF N+++ +A + F ML + +P+ AT ++LP A + +
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 437 AMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 495
IH Y++ RS + V + LV Y + G + A +F +
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFT--RMGSKDLVSWNVVIAG 303
Query: 496 YGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 554
Y + A LF+ +V G V P+ +T S+L C+ + G + ++L+ ++
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 555 PLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+I R G + AY M K + W A+L A
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF + L +W+ M+R+Y + P++A+ +F E+ G+ P+ T ++ C+ L+
Sbjct: 524 LFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR-PNTVTIMNLLPVCAQLA 582
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L + HG + G D ++ +LL +Y G + A VF + +V + M+
Sbjct: 583 SLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVA 641
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGFW 248
GY + R +EAL +Y+ M ++ ++PD + ++L AC ++ G +++ ++ G
Sbjct: 642 GYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMK 701
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 289
M +D+ + G++ +A+ +M E + W TL+
Sbjct: 702 PTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 281/520 (54%), Gaps = 2/520 (0%)
Query: 149 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 208
DTF+ N LL + + + + L+F + + +N++ING+ N+ E L ++ +
Sbjct: 44 DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIR 103
Query: 209 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 268
G+ T VL AC + +LG ++H+LV + GF ++ ++L +Y G++
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 328
+A L +E+ + VVTWT L +GY +G R A+ L + M+ GVKP+ + +LSAC
Sbjct: 164 DAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 329 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
G L+ G+ + + +++ V T L+++YAKC + VF +K W+
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWST 283
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
++ G+ NS +E I+LF QML ++++PD + L + A L L + R
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
FL L +A+ L+D+Y+KCG++ +F + K+GH +++ ++
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFK--EMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
F Q + G+ P+ TF +L C HAGL+ +GL F + + + V+HY C++DL G
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 569 RAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 628
RAG L+DAY LI MP++PN VWGALL C ++ +L E + LEP N GNYV
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 629 LANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
L+N+Y+ GRW +A VRDM+N G++K+P S +E+ +
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 222/428 (51%), Gaps = 32/428 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF ++F +N+++ +V H+ L+LF+ + GL L FT+P+++KAC+ S
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYL-HGFTFPLVLKACTRAS 125
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+G+ +H + K GF+ D SLL++Y +G A +FD + +++VV+W + +
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + R EA+ ++ +M++ GV+PD +V VL AC + +++ G + ++E
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N VR ++++Y KCG+M++A + + M E D+VTW+T+I GY N + + L ML
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI----RQKLESEVIVETALIDMYAKC 365
E +KP+ S+ LS+C S G+L+ G+ W I R + + + + ALIDMYAKC
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGE----WGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
++VF + +K NA +SG N V+ + +F Q + PD +TF LL
Sbjct: 362 GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL 421
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGYAH 473
+H LI+ G + +E +VD++ + G L A+
Sbjct: 422 CGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 474 HIFNIIPL 481
+ +P+
Sbjct: 471 RLICDMPM 478
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 164/372 (44%), Gaps = 15/372 (4%)
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
T++SV LK + + H L + F N++++ + Q K ++ L +
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDT-FLVNLLLKRTLF-----FRQTKYSYLLFSHT 71
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
++ + +LING++ N L L + G+ + + +L AC S G
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 397
LH+ ++ +V T+L+ +Y+ N ++K+F + + W AL SG+ +
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 457
REAI LFK+M+ V+PD+ +L A + DL I Y+ V +
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 517
LV++Y+KCG + A +F+ + Y + + + LF QM+Q +
Sbjct: 252 TLVNLYAKCGKMEKARSVFD--SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 518 QPNQITFTSVLHACSHAGLVDE---GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
+P+Q + L +C+ G +D G+SL + +H+ + + +ID+ + G +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISL----IDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 575 DAYNLIRTMPIK 586
+ + + M K
Sbjct: 366 RGFEVFKEMKEK 377
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 305 bits (780), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 264/506 (52%), Gaps = 11/506 (2%)
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
A+ VF+ + +V WN+MI GY + ++AL Y M+ G PD T VL AC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
L++++ G VH V + GF NM V +L MY+ CG++ + ++ + +VV W +L
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW------ 342
I+G++ N A+ R M GVK N + LL ACG + GK H +
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 343 --AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 400
+ K+ VI+ T+LIDMYAKC + +F ++ WN++++G+ N
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 401 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 460
EA+ +F ML + PD TF S++ A + + +IH Y+ ++GF+ + LV
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 461 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQP 519
++Y+K G A F L HGHG A+S+F +M + G P
Sbjct: 360 NMYAKTGDAESAKKAFE--DLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATP 417
Query: 520 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 579
+ IT+ VL+ACSH GLV+EG F M H + P V+HY C++D+L RAG+ +A L
Sbjct: 418 DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERL 477
Query: 580 IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRW 639
++TMP+KPN +WGALL C HEN+EL + E E +G YVLL+N+YA GRW
Sbjct: 478 VKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRW 537
Query: 640 RDAENVRDMVNVVGLRKLPAQSLVEV 665
D + +R+ + + K+ S VE
Sbjct: 538 ADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 218/425 (51%), Gaps = 17/425 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+++ S++ WN+M+R Y P AL + EM+ G + PD FT+P ++KACS L
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLR 121
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G VHG K GF+++ +V LL MYM GE VF+ + + VV+W ++I+
Sbjct: 122 DIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLIS 181
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 247
G+ NNR +A+ + M GV+ + +V +L ACG K++ G+ H ++ GF
Sbjct: 182 GFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP 241
Query: 248 ------WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 301
N+++ +++DMY KCG ++ A +L + M E +V+W ++I GY NGDA A
Sbjct: 242 YFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEA 301
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L + ML G+ P+ V+ S++ A G G+ +HA+ + + + AL++M
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNM 361
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNAT 420
YAK + K F KK T W ++ G + EA+ +F++M K + PD T
Sbjct: 362 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 476
+ +L A + + +++ Y L+ LE +VDI S+ G A +
Sbjct: 422 YLGVLYACSHIGLVEEGQR---YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLV 478
Query: 477 NIIPL 481
+P+
Sbjct: 479 KTMPV 483
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 308/619 (49%), Gaps = 77/619 (12%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R +WN ++ + ++ G A+ LF EM SG D+ T +++ CS+
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKE 103
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT--------- 180
G +HG + G + + + NSL+ MY G+ E ++ VF+ MK++
Sbjct: 104 GFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 181 --------------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
+V+WN++++GY +++A+ V RM AG++P
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
+++ S+L A +++LG+ +H + W ++ V ++DMY+K G + A +
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
+ MD ++V W +L++G + A L M EG+KP+ ++ SL S + G
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK-- 341
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALL 390
E AL V K +K AP W A+
Sbjct: 342 -------------------PEKAL--------------DVIGKMKEKGVAPNVVSWTAIF 368
Query: 391 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 450
SG N R A+++F +M + V P+ AT ++LL L+ L +H + +R +
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
VA+ LVD+Y K G L A IF + Y G GE ++ F+
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIF--WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 570
M+++G++P+ ITFTSVL C ++GLV EG F M ++ IIP ++H +C++DLLGR+
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 571 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 630
G L++A++ I+TM +KP+ +WGA L +C H ++EL E+A + LEP N+ NY+++
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMI 606
Query: 631 NLYAAVGRWRDAENVRDMV 649
NLY+ + RW D E +R+++
Sbjct: 607 NLYSNLNRWEDVERIRNLM 625
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 226/505 (44%), Gaps = 81/505 (16%)
Query: 133 MGVGVHGMTFKAGFD-LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 191
+G+ +HG K G D DT V ++ + Y A +FD M ++ ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
R+ E+A+ ++ M +G + +T+V +L C + GR++H V G N+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
+ N+++ MY + G+++ + + N M + ++ +W ++++ Y G A+ L M +
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 312 GVKPNLVS-----------------------------------VASLLSACGSFGSLNYG 336
G+KP++V+ ++SLL A G L G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 396
K +H + +R +L +V VET LIDMY K + VF K WN+L+SG +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 397 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 456
L+++A L +M + ++PD T+NSL YA L ++A+++ + G VA
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG------VA 358
Query: 457 SILVD---IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 513
+V I+S C K+G+ A+ +F +M
Sbjct: 359 PNVVSWTAIFSGC------------------------------SKNGNFRNALKVFIKMQ 388
Query: 514 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY--TCIIDLLGRAG 571
+ GV PN T +++L L+ G + F L+++ I D Y T ++D+ G++G
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI---CDAYVATALVDMYGKSG 445
Query: 572 QLNDAYNLIRTMPIKPNHAVWGALL 596
L A + + K + A W +L
Sbjct: 446 DLQSAIEIFWGIKNK-SLASWNCML 469
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 308/599 (51%), Gaps = 15/599 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ L + SWNT++ + ALN V M +G+ D FTY + C
Sbjct: 133 IFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVF-DAFTYSTALSFCVGSE 188
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+G+ + K G + D V NS + MY +G A+ VFD M + ++SWN++++
Sbjct: 189 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS 248
Query: 190 GYFRNNR-AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G + EA+ ++ MM GVE D + SV+ C +++L R++H L ++G+
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V N ++ Y KCG ++ + ++M E +VV+WTT+I+ N D ++ L M
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS---NKDDAVSIFLN--M 363
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+GV PN V+ L++A + G +H I+ SE V + I +YAK
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEAL 423
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ K F + + WNA++SGF N EA+++F + P+ TF S+L A
Sbjct: 424 EDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAI 482
Query: 429 AVLADL--KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A D+ KQ H +L++ G V+S L+D+Y+K G++ + +FN +
Sbjct: 483 AFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFN--EMSQKNQ 540
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
Y HG E ++LF++M++ V P+ +TF SVL AC+ G+VD+G +F
Sbjct: 541 FVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNM 600
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
M++ + + P +HY+C++D+LGRAG+L +A L+ +P P ++ ++LG+C H NV+
Sbjct: 601 MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 660
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+G A E++PE +G+YV + N+YA W A +R + + K S ++V
Sbjct: 661 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 254/544 (46%), Gaps = 23/544 (4%)
Query: 70 LFDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL--TLPDNFTYPIIIKACS 126
LFD QR + S N + ++ P AL++F E + G D T + +KAC
Sbjct: 30 LFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR 89
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
L G +HG + +GF V N+++ MY AG + A +F+ + + VVSWNT
Sbjct: 90 --GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
+++G+ N + AL RM AGV D T + L C + LG ++ + V + G
Sbjct: 148 ILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD-ARSALMLC 305
++VV N+ + MY + G + A + +EM D+++W +L++G G A+++
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
R M+ EGV+ + VS S+++ C L + +H I++ ES + V L+ Y+KC
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
VF + S++ W ++S S +A+ +F M V P+ TF L+
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
A +K+ + IH I++GF+ V + + +Y+K +L A F I
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF--RE 437
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG--LVDEGLSL 543
+ ++G A+ +F + PN+ TF SVL+A + A V +G
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 544 FKFMLKQH-QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
+LK P+V + ++D+ + G ++++ + M K N VW +++ A SH
Sbjct: 497 HAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSH 553
Query: 603 ENVE 606
+ E
Sbjct: 554 GDFE 557
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 290/581 (49%), Gaps = 66/581 (11%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 210
F N++L+ Y G+ + FD + ++ VSW TMI GY + +A+RV M+
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCG----- 265
G+EP T+ +VL + + +E G++VH+ + + G GN+ V N++L+MY KCG
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 266 --------------------------QMKEAWWLANEMDETDVVTWTTLINGYILNG-DA 298
QM A +M E D+VTW ++I+G+ G D
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
R+ + +++ + P+ ++AS+LSAC + L GK +H+ + + IV AL
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 359 IDMYAKCNC---------------------------------GNLSYKVFMKTSKKRTAP 385
I MY++C N + +F+ +
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 386 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 445
W A++ G+ + EAI LF+ M+ +P++ T ++L + LA L IH +
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 446 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
+SG +Y + V++ L+ +Y+K G++ A F++I +HGH E A
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL-AQHGHAEEA 499
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 565
+ LF M+ G++P+ IT+ V AC+HAGLV++G F M +IIP + HY C++D
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 566 LLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 625
L GRAG L +A I MPI+P+ WG+LL AC H+N++LG+VAA LEPEN+G
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 626 YVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
Y LANLY+A G+W +A +R + ++K S +EV+
Sbjct: 620 YSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 220/490 (44%), Gaps = 90/490 (18%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
FD LPQR SW TM+ Y +G+ H A+ + +M+ G+ P FT ++ + +
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE-PTQFTLTNVLASVAATR 160
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDL-------------- 175
++ G VH K G + V NSLL MY G+ A+ VFD
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 176 -----------------MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCA 217
M E+ +V+WN+MI+G+ + AL ++++M+ D+ + PD
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE- 276
T+ SVL AC L+ + +G+++H+ + GF + +V NA++ MY +CG ++ A L +
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 277 --------------------------------MDETDVVTWTTLINGYILNGDARSALML 304
+ + DVV WT +I GY +G A+ L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
R M+ G +PN ++A++LS S SL++GK +H A++ V V ALI MYAK
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 365 C-NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
N + S + ++ T W +++ + EA++LF+ ML++ ++PD+ T+
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGY 471
+ A H L+ G Y L + +VD++ + G L
Sbjct: 521 VFSACT-----------HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 472 AHHIFNIIPL 481
A +P+
Sbjct: 570 AQEFIEKMPI 579
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 135/266 (50%), Gaps = 6/266 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +L R + +W M+ Y Q G +A+NLF M+ G P+++T ++ S L+
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG-QRPNSYTLAAMLSVASSLA 427
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTMI 188
L G +HG K+G V N+L+ MY AG A FDL++ E+ VSW +MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGF 247
++ AEEAL ++ M+ G+ PD T V V AC V GR+ ++K+
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDAR-SALMLC 305
+ M+D++ + G ++EA +M E DVVTW +L++ ++ + +
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 306 RVMLLEGVKPNLVS-VASLLSACGSF 330
R++LLE S +A+L SACG +
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKW 633
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/559 (31%), Positives = 296/559 (52%), Gaps = 6/559 (1%)
Query: 111 TLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ 170
TL + +++ C D + + K+GF + + L+ + G+ + A+
Sbjct: 61 TLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYAR 119
Query: 171 LVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 230
VFD M E+ +V+WN++I ++ R++EA+ +Y M+ V PD T+ SV A L
Sbjct: 120 QVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS 179
Query: 231 NVELGREVHALVKEKGFW-GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI 289
+ + H L G N+ V +A++DMYVK G+ +EA + + ++E DVV T LI
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 290 NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 349
GY G+ A+ + ML+E V+PN + AS+L +CG+ + GK +H ++ E
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 350 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
S + +T+L+ MY +C+ + S +VF W +L+SG + N A+ F++M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 410 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 469
+ ++P++ T +S L + LA ++ IH + + GF S L+D+Y KCG
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 470 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
A +F+ L Y ++G G A+ LF +M+ G+QPN +T SVL
Sbjct: 420 DMARLVFD--TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH 589
AC+++ LV+EG LF ++ +I+ DHY C++DLLGRAG+L +A ++ T I P+
Sbjct: 478 ACNNSRLVEEGCELFD-SFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDL 535
Query: 590 AVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMV 649
+W LL AC H VE+ E R E+EP + G +L++NLYA+ G+W ++ +
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Query: 650 NVVGLRKLPAQSLVEVRSE 668
+ L+K PA S VE+ E
Sbjct: 596 KDMKLKKNPAMSWVEINKE 614
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 198/359 (55%), Gaps = 2/359 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R + +WN+++ ++ R +A+ ++ MI + + LPD +T + KA SDLS
Sbjct: 121 VFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV-LPDEYTLSSVFKAFSDLS 179
Query: 130 FLDMGVGVHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
HG+ G ++ + FV ++L+ MY+ G+ +A+LV D ++E+ VV +I
Sbjct: 180 LEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI 239
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY + EA++ + M+ V+P+ T SVL +CG LK++ G+ +H L+ + GF
Sbjct: 240 VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFE 299
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ + ++L MY++C + ++ + ++ + V+WT+LI+G + NG AL+ R M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ + +KPN +++S L C + G+ +H + + + + LID+Y KC C
Sbjct: 360 MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCS 419
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+++ VF S+ N ++ + N REA+ LF++M+ +QP++ T S+L A
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 184/587 (31%), Positives = 303/587 (51%), Gaps = 5/587 (0%)
Query: 83 NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTF 142
N + Y+ G+ L F +M+ S + D T+ +++ + L +G VH M
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVEC-DQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 143 KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 202
K G DL V NSL+ MY + A+ VFD M E+ ++SWN++I G +N EA+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 203 VYNRMMDAGVEPDCATVVSVLPACGLL-KNVELGREVHALVKEKGFWGNMVVRNAMLDMY 261
++ +++ G++PD T+ SVL A L + + L ++VH + + V A++D Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 262 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVA 321
+ MKEA L E D+V W ++ GY + D L L +M +G + + ++A
Sbjct: 463 SRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
++ CG ++N GK +HA+AI+ + ++ V + ++DMY KC + + F
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 382 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
W ++SG I N A +F QM + V PD T +L A + L L+Q IH
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 501
++ V + LVD+Y+KCGS+ A+ +F I + +HG
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL--AQHGE 699
Query: 502 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 561
G+ + LF QM G++P+++TF VL ACSH+GLV E + M + I P ++HY+
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 562 CIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 621
C+ D LGRAG + A NLI +M ++ + +++ LL AC + E G+ A ELEP
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 622 NTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
++ YVLL+N+YAA +W + + R M+ ++K P S +EV+++
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNK 866
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 193/359 (53%), Gaps = 3/359 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL- 128
+FD + +R L SWN+++ Q G +A+ LF++++ GL PD +T ++KA S L
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK-PDQYTMTSVLKAASSLP 430
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L + VH K D+FV +L+ Y ++A+++F+ +V+WN M+
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMM 489
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY +++ + L+++ M G D T+ +V CG L + G++VHA + G+
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++ V + +LDMYVKCG M A + + + D V WTT+I+G I NG+ A + M
Sbjct: 550 LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
L GV P+ ++A+L A +L G+ +HA A++ ++ V T+L+DMYAKC
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ +Y +F + WNA+L G + +E +QLFKQM ++PD TF +L A
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 136/535 (25%), Positives = 251/535 (46%), Gaps = 41/535 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ +P R + WN M++ Y++MG +A++L SGL P+ T ++ + D S
Sbjct: 202 LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLN-PNEITLRLLARISGDDS 260
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
D G +F G D + ++++F N ++
Sbjct: 261 --DAG---QVKSFANGNDASSV-----------------SEIIFR----------NKGLS 288
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y + + L+ + M+++ VE D T + +L + ++ LG++VH + + G
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V N++++MY K + A + + M E D+++W ++I G NG A+ L +L
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 310 LEGVKPNLVSVASLLSACGSFGS-LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
G+KP+ ++ S+L A S L+ K +H AI+ S+ V TALID Y++ C
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ +F + + A WNA+++G+ + + ++LF M + + D+ T ++
Sbjct: 469 KEAEILFERHNFDLVA-WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
L + Q +H Y I+SG+ L V+S ++D+Y KCG + A F+ IP+
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
++G E A +F+QM GV P++ T ++ A S +++G + L
Sbjct: 588 TMISGCI--ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANAL 645
Query: 549 KQHQI-IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
K + P V T ++D+ + G ++DAY L + + + N W A+L H
Sbjct: 646 KLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQH 697
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVH 138
L +WN MM Y Q H L LF ++H D+FT + K C L ++ G VH
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFA-LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 139 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAE 198
K+G+DLD +V + +L MY+ G+ AQ FD + V+W TMI+G N E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 258
A V+++M GV PD T+ ++ A L +E GR++HA + + V +++
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 259 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLV 318
DMY KCG + +A+ L ++ ++ W ++ G +G+ + L L + M G+KP+ V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 319 SVASLLSACGSFG 331
+ +LSAC G
Sbjct: 721 TFIGVLSACSHSG 733
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/555 (22%), Positives = 233/555 (41%), Gaps = 68/555 (12%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRP-----HDALNLFVEMIHSGLTLPDNFTYPIIIKA 124
+FD +P R L SWN+++ Y Q A LF ++ + T ++K
Sbjct: 96 VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKL 154
Query: 125 CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 184
C ++ HG K G D D FV +L+ +Y+ G+ ++ +++F+ M + VV W
Sbjct: 155 CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPD------CATVVSVLPACGLLKNVELGREV 238
N M+ Y EEA+ + + +G+ P+ A + G +K+ G +
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDA 274
Query: 239 HALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDA 298
++ ++ RN L Y+ GQ
Sbjct: 275 SSV-------SEIIFRNKGLSEYLHSGQY------------------------------- 296
Query: 299 RSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
SAL+ C ++E V+ + V+ +L+ SL G+ +H A++ L+ + V +
Sbjct: 297 -SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 417
LI+MY K + VF S++ WN++++G N L EA+ LF Q+L ++PD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 418 NATFNSLLPAYAVLAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYS-----KCGSLGY 471
T S+L A + L + L + +H + I+ + V++ L+D YS K + +
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
H F+++ Y + G + LF M + G + + T +V C
Sbjct: 476 ERHNFDLVAW--------NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 532 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV 591
+++G + + +K + L + I+D+ + G ++ A ++P+ P+
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVS-SGILDMYVKCGDMSAAQFAFDSIPV-PDDVA 585
Query: 592 WGALLGACVSHENVE 606
W ++ C+ + E
Sbjct: 586 WTTMISGCIENGEEE 600
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 178/422 (42%), Gaps = 42/422 (9%)
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
S L +G H + + F+ N+L++MY G A+ VFD M ++ +VSWN+++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 189 NGYFRNNRA-----EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
Y +++ ++A ++ + V T+ +L C V H
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+ G G+ V A++++Y+K G++KE L EM DVV W ++ Y+ G A+
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 363
L G+ PN +++ L G + + +A
Sbjct: 233 LSSAFHSSGLNPNEITLRLLARISGDDS-----------------------DAGQVKSFA 269
Query: 364 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
N + ++ + N LS ++H+ ++ F M+ DV+ D TF
Sbjct: 270 NGNDASSVSEIIFR---------NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
+L + L +HC ++ G L V++ L+++Y K G+A +F+ +
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD--NMSE 378
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
++G AV LF Q+++ G++P+Q T TSVL A S + EGLSL
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSL 435
Query: 544 FK 545
K
Sbjct: 436 SK 437
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/603 (29%), Positives = 298/603 (49%), Gaps = 43/603 (7%)
Query: 102 FVEMIHS----GLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLL 157
+V+MIH L P+ F Y I+ A + + V F + F N+LL
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV----FDRIPQPNLFSWNNLL 79
Query: 158 AMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDC 216
Y AG + + F+ + ++ V+WN +I GY + A++ YN MM D
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR 139
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY--------------- 261
T++++L +V LG+++H V + GF ++V + +L MY
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYG 199
Query: 262 ----------------VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
+ CG +++A L M E D V+W +I G NG A+ A+
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
R M ++G+K + S+L ACG G++N GK +HA IR + + V +ALIDMY KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
C + + VF + +K W A++ G+ EA+++F M + PD+ T +
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
A A ++ L++ H I SG ++ + V++ LV +Y KCG + + +FN +
Sbjct: 379 SACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN--EMNVRD 436
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
Y + G + LF++MVQ G++P+ +T T V+ ACS AGLV++G FK
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
M ++ I+P + HY+C+IDL R+G+L +A I MP P+ W LL AC + N+
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
E+G+ AA EL+P + Y LL+++YA+ G+W +R + ++K P QS ++
Sbjct: 557 EIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKW 616
Query: 666 RSE 668
+ +
Sbjct: 617 KGK 619
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 201/443 (45%), Gaps = 33/443 (7%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F+ LP R +WN ++ Y G A+ + M+ T ++K S
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF----------------- 173
+ +G +HG K GF+ V + LL MY N G A+ VF
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 174 --------DLMK-----EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVV 220
D ++ E+ VSW MI G +N A+EA+ + M G++ D
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 221 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
SVLPACG L + G+++HA + F ++ V +A++DMY KC + A + + M +
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 340
+VV+WT ++ GY G A A+ + M G+ P+ ++ +SAC + SL G H
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 341 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 400
AI L V V +L+ +Y KC + S ++F + + + W A++S +
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 401 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS--GFLYRLEVASI 458
E IQLF +M+ ++PD T ++ A + A L + + L+ S G + + S
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACS-RAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 459 LVDIYSKCGSLGYAHHIFNIIPL 481
++D++S+ G L A N +P
Sbjct: 514 MIDLFSRSGRLEEAMRFINGMPF 536
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 124/223 (55%), Gaps = 3/223 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + Q+++ SW M+ Y Q GR +A+ +F++M SG+ PD++T I AC+++S
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID-PDHYTLGQAISACANVS 385
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G HG +G V NSL+ +Y G+ + + +F+ M + VSW M++
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGFW 248
Y + RA E ++++++M+ G++PD T+ V+ AC VE G R + E G
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 290
++ + M+D++ + G+++EA N M D + WTTL++
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 286/529 (54%), Gaps = 35/529 (6%)
Query: 172 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 231
VF ++E ++ WNTM G+ ++ AL++Y M+ G+ P+ T VL +C K
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 232 VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA--------------------- 270
+ G+++H V + G ++ V +++ MYV+ G++++A
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 271 ----------WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 320
L +E+ DVV+W +I+GY G+ + AL L + M+ V+P+ ++
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 321 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 380
+++SAC GS+ G+ +H W S + + ALID+Y+KC + +F +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 381 KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 440
K WN L+ G+ H +L +EA+ LF++ML P++ T S+LPA A L + I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 441 HCYLIR--SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 498
H Y+ + G + + L+D+Y+KCG + AH +FN I +
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAM 447
Query: 499 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD 558
HG + + LF++M + G+QP+ ITF +L ACSH+G++D G +F+ M + +++ P ++
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 507
Query: 559 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 618
HY C+IDLLG +G +A +I M ++P+ +W +LL AC H NVELGE A ++
Sbjct: 508 HYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567
Query: 619 EPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
EPEN G+YVLL+N+YA+ GRW + R ++N G++K+P S +E+ S
Sbjct: 568 EPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 211/392 (53%), Gaps = 36/392 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F T+ + +L WNTM R + P AL L+V MI GL LP+++T+P ++K+C+
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL-LPNSYTFPFVLKSCAKSK 148
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD--------------- 174
G +HG K G DLD +V SL++MY+ G E A VFD
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 175 -------------LMKE---QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
L E + VVSWN MI+GY +EAL ++ MM V PD +T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
+V+V+ AC ++ELGR+VH + + GF N+ + NA++D+Y KCG+++ A L +
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
DV++W TLI GY + AL+L + ML G PN V++ S+L AC G+++ G+
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 339 LHAWAIRQKLE---SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
+H + I ++L+ + + T+LIDMYAKC +++VF K + WNA++ GF
Sbjct: 389 IHVY-IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Query: 396 NSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ + LF +M +QPD+ TF LL A
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 304/597 (50%), Gaps = 17/597 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ + ++ SW TMM Y G + L LF M + + + + ++A + +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM-NKVAAASALQAAAYVG 314
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G+ +H + G D V SL++MY GE E A+ +F ++++ VVSW+ MI
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y + + +EA+ ++ MM ++P+ T+ SVL C + LG+ +H +
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ A++ MY KCG+ A + D V + L GY GDA A + + M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
L GV P+ ++ +L C G C++ I+ +SE V ALI+M+ KC+
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 370 LSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ +F K +K T WN +++G++ + EA+ F+QM V+ QP+ TF +++ A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
A L+ L+ M++H LI+ GF + V + LVD+Y+KCG + + F I +
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF--IEISNKYIVS 672
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
Y HG AVSLF M ++ ++P+ ++F SVL AC HAGLV+EG +F+ M
Sbjct: 673 WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMG 732
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
++H+I V+HY C++DLLG+AG +A ++R M +K + VWGALL + H N+ L
Sbjct: 733 ERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLS 792
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
A +LEP N +Y + ++ NV ++K+PA S +EV
Sbjct: 793 NAALCQLVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 252/537 (46%), Gaps = 5/537 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++ + WN+M+R Y + G +AL F M PD +++ +KAC+
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G+ +H + + G + D ++ +L+ MY A + A+ VFD M + VV+WNTM++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G +N + AL +++ M V+ D ++ +++PA L+ ++ R +H LV +KGF
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI- 233
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ ++DMY C + A + E+ D +W T++ Y NG L L +M
Sbjct: 234 -FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
V+ N V+ AS L A G L G +H +A++Q L +V V T+L+ MY+KC
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELE 352
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
++ ++F+ + W+A+++ + EAI LF+ M+ ++P+ T S+L A
Sbjct: 353 IAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
+A + +IHCY I++ LE A+ ++ +Y+KCG A F +P+
Sbjct: 413 GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI--KDAVAF 470
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
Y + G A ++ M GV P+ T +L C+ G ++ ++K
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
H +I++ + L A L + + W ++ + H E
Sbjct: 531 -HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 251/534 (47%), Gaps = 8/534 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + + +WNTM+ Q G AL LF +M S D+ + +I A S L
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLE 215
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
D+ +HG+ K GF + L+ MY N + A+ VF+ + + SW TM+
Sbjct: 216 KSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y N EE L +++ M + V + S L A + ++ G +H ++G G
Sbjct: 274 AYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG 333
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ V +++ MY KCG+++ A L +++ DVV+W+ +I Y G A+ L R M+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+KPN V++ S+L C + GK +H +AI+ +ESE+ TA+I MYAKC +
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ K F + K +NAL G+ +A ++K M + V PD+ T +L A
Sbjct: 454 PALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
+D + ++ +I+ GF VA L+++++KC +L A +F+
Sbjct: 514 FCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGF-EKSTVSW 572
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
Y HG E AV+ F QM QPN +TF +++ A + + G+S+ ++
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI- 631
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV-WGALLGACVSH 602
Q ++D+ + G + + + I + V W +L A +H
Sbjct: 632 QCGFCSQTPVGNSLVDMYAKCGMIESSEKCF--IEISNKYIVSWNTMLSAYAAH 683
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 234/479 (48%), Gaps = 18/479 (3%)
Query: 112 LPDNFT-YPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ 170
+P N+T ++++ C + L + VHG +G N L+ Y ++ ++
Sbjct: 1 MPINYTNLLLMLRECKNFRCL---LQVHGSLIVSGLK----PHNQLINAYSLFQRQDLSR 53
Query: 171 LVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLL 229
++FD +++ VV WN+MI GY R EAL + M + G++PD + L AC
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
Query: 230 KNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI 289
+ + G +H L+ E G ++ + A+++MY K + A + ++M DVVTW T++
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMV 173
Query: 290 NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 349
+G NG + +AL+L M V + VS+ +L+ A + +CLH I++
Sbjct: 174 SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF- 232
Query: 350 SEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
+ LIDMY CNC +L + VF + +K + W +++ + HN E ++LF
Sbjct: 233 -IFAFSSGLIDMY--CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
M DV+ + S L A A + DL + + IH Y ++ G + + VA+ L+ +YSKCG
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 527
L A +F I + Y + G + A+SLF M++ ++PN +T TSV
Sbjct: 350 ELEIAEQLF--INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 528 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 586
L C+ G S+ + +K I ++ T +I + + G+ + A +PIK
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 254/445 (57%), Gaps = 3/445 (0%)
Query: 221 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
++L C + K + GR VHA + + F ++V+ N +L+MY KCG ++EA + +M +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 340
D VTWTTLI+GY + AL+ ML G PN +++S++ A + G LH
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 341 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVR 400
+ ++ +S V V +AL+D+Y + + + VF + WNAL++G S
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 401 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 460
+A++LF+ ML +P + ++ SL A + L+Q +H Y+I+SG + L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 461 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 520
D+Y+K GS+ A IF+ L Y +HG G+ AV F +M + G++PN
Sbjct: 305 DMYAKSGSIHDARKIFD--RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 521 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI 580
+I+F SVL ACSH+GL+DEG ++ M K+ I+P HY ++DLLGRAG LN A I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 581 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWR 640
MPI+P A+W ALL AC H+N ELG AA FEL+P++ G +V+L N+YA+ GRW
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 641 DAENVRDMVNVVGLRKLPAQSLVEV 665
DA VR + G++K PA S VE+
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEI 506
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 192/374 (51%), Gaps = 1/374 (0%)
Query: 109 GLTLP-DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKE 167
G +P D Y ++K C+ L G VH ++ F D + N+LL MY G E
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 168 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 227
+A+ VF+ M ++ V+W T+I+GY +++R +AL +N+M+ G P+ T+ SV+ A
Sbjct: 113 EARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
Query: 228 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 287
+ G ++H + GF N+ V +A+LD+Y + G M +A + + ++ + V+W
Sbjct: 173 AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA 232
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
LI G+ AL L + ML +G +P+ S ASL AC S G L GK +HA+ I+
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
+ L+DMYAK + + K+F + +K+ WN+LL+ + + +EA+ F+
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
+M ++P+ +F S+L A + L + + + + + G + +VD+ + G
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG 412
Query: 468 SLGYAHHIFNIIPL 481
L A +P+
Sbjct: 413 DLNRALRFIEEMPI 426
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 168/329 (51%), Gaps = 12/329 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +PQR +W T++ Y Q RP DAL F +M+ G + P+ FT +IKA +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAER 175
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G +HG K GFD + V ++LL +Y G + AQLVFD ++ + VSWN +I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ R + E+AL ++ M+ G P + S+ AC +E G+ VHA + + G
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N +LDMY K G + +A + + + + DVV+W +L+ Y +G + A+ M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA-----LIDMYAK 364
G++PN +S S+L+AC G L+ G W + ++ + IV A ++D+ +
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEG-----WHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 365 CNCGNLSYKVFMKTSKKRTAP-WNALLSG 392
N + + + + TA W ALL+
Sbjct: 411 AGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 44/272 (16%)
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
+ D +N+LL V L Q +H ++++S F + + + + L+++Y+KCGSL A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA--- 530
+F +P Y +H A+ FNQM++ G PN+ T +SV+ A
Sbjct: 116 KVFEKMP--QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 531 -----CSHA--GL-----VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL----------- 567
C H G D + + +L + L+D + D L
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 568 ----GRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 620
R A L + M +P+H + +L GAC S +E G +W
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG----KWVHAYMI 289
Query: 621 ENTGNYVLLA-----NLYAAVGRWRDAENVRD 647
++ V A ++YA G DA + D
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/607 (29%), Positives = 307/607 (50%), Gaps = 49/607 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R+ +WN +M YVQ G+ +A+ LF +M G+ P T + A +++
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE-PTRVTVSTCLSASANMG 288
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
++ G H + G +LD + SLL Y G E A++VFD M E+ VV+WN +I+
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + E+A+ + M ++ DC T+ +++ A +N++LG+EV F
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++V+ + ++DMY KCG + +A + + E D++ W TL+ Y +G + AL L M
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
LEGV PN+++ ++ L G+ A + +++S I+ +
Sbjct: 469 LEGVPPNVITWNLII-----LSLLRNGQVDEAKDMFLQMQSSGIIPNLI----------- 512
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
W +++G + N EAI ++M ++P+ + L A A
Sbjct: 513 ---------------SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASI---LVDIYSKCGSLGYAHHIF-----NIIPL 481
LA L IH Y+IR+ L + SI LVD+Y+KCG + A +F + +PL
Sbjct: 558 HLASLHIGRTIHGYIIRN--LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
Y +G+ + A++L+ + G++P+ IT T+VL AC+HAG +++ +
Sbjct: 616 SNAMISA-------YALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 601
+F ++ + + P ++HY ++DLL AG+ A LI MP KP+ + +L+ +C
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNK 728
Query: 602 HENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
EL + +R E EPEN+GNYV ++N YA G W + +R+M+ GL+K P S
Sbjct: 729 QRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Query: 662 LVEVRSE 668
+++ E
Sbjct: 789 WIQITGE 795
Score = 252 bits (643), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 263/507 (51%), Gaps = 34/507 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF L R++FSW ++ + ++G AL FVEM+ + + PDNF P + KAC L
Sbjct: 129 LFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI-FPDNFVVPNVCKACGALK 187
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G GVHG K+G + FV +SL MY G + A VFD + ++ V+WN ++
Sbjct: 188 WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMV 247
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +N + EEA+R+++ M GVEP TV + L A + VE G++ HA+ G
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ ++ ++L+ Y K G ++ A + + M E DVVTW +I+GY+ G A+ +C++M
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
LE +K + V++A+L+SA +L GK + + IR ES++++ + ++DMYAKC
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ KVF T +K WN LL+ + + L EA++LF M ++ V P+ T+N ++ +
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
+ +A ++ + SG + L + + + ++
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNL---------------ISWTTMMNGMV---------- 522
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
++G E A+ +M +SG++PN + T L AC+H + G ++ ++++
Sbjct: 523 --------QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDA 576
Q LV T ++D+ + G +N A
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKA 601
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 263/560 (46%), Gaps = 11/560 (1%)
Query: 93 GRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAG--FDLDT 150
G +AL+L EM L + Y I++ C L G +H K G + +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEI-YGEILQGCVYERDLSTGKQIHARILKNGDFYARNE 107
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 210
+++ L+ Y E A+++F ++ + V SW +I R E AL + M++
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 270
+ PD V +V ACG LK GR VH V + G + V +++ DMY KCG + +A
Sbjct: 168 EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 271 WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF 330
+ +E+ + + V W L+ GY+ NG A+ L M +GV+P V+V++ LSA +
Sbjct: 228 SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 331 GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL 390
G + GK HA AI +E + I+ T+L++ Y K + VF + +K WN ++
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLII 347
Query: 391 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 450
SG++ LV +AI + + M ++ ++ D T +L+ A A +LK + CY IR F
Sbjct: 348 SGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
+ +AS ++D+Y+KCGS+ A +F+ Y + G A+ LF
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFD--STVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 570
M GV PN IT+ ++ + G VDE +F ++ IIP + +T +++ + +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 571 GQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT--GN 625
G +A +R M ++PN L AC ++ +G + ++
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI 584
Query: 626 YVLLANLYAAVGRWRDAENV 645
L ++YA G AE V
Sbjct: 585 ETSLVDMYAKCGDINKAEKV 604
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 189/600 (31%), Positives = 317/600 (52%), Gaps = 18/600 (3%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD + R SWN ++ + G + L F ++ G P+ T ++I AC L F
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE-PNTSTLVLVIHACRSLWF 142
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
G +HG ++GF + VQNS+L MY ++ + A+ +FD M E+ V+SW+ +I
Sbjct: 143 --DGEKIHGYVIRSGFCGISSVQNSILCMYADS-DSLSARKLFDEMSERDVISWSVVIRS 199
Query: 191 YFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-W 248
Y ++ L+++ M+ +A EPDC TV SVL AC +++++++GR VH +GF
Sbjct: 200 YVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++ V N+++DMY K + A+ + +E ++V+W +++ G++ N AL + +M
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ E V+ + V+V SLL C F K +H IR+ ES + ++LID Y C+
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ + V + K + ++SG H EAI +F M +D P+ T SLL A
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM--RDT-PNAITVISLLNAC 436
Query: 429 AVLADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+V ADL+ + H IR + + V + +VD Y+KCG++ A F+ I
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT--EKNII 494
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y +G + A++LF++M Q G PN +T+ + L AC+H GLV +GL +FK M
Sbjct: 495 SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP--IKPNHAVWGALLGACVSH--E 603
+++ P + HY+CI+D+L RAG+++ A LI+ +P +K + WGA+L C + +
Sbjct: 555 VEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKK 613
Query: 604 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
+ EV A ELEP + Y+L ++ +AA W D +R +V +R + S+V
Sbjct: 614 LIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 220/414 (53%), Gaps = 7/414 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + +R + SW+ ++R YVQ P L LF EM+H T PD T ++KAC+ +
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 130 FLDMGVGVHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+D+G VHG + + GFDL D FV NSL+ MY + + A VFD + +VSWN+++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G+ N R +EAL +++ M+ VE D TVVS+L C + + +H ++ +G+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL-MLCRV 307
N V ++++D Y C + +A + + M DVV+ +T+I+G G + A+ + C +
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM 420
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCN 366
PN ++V SLL+AC L K H AIR+ L +++ V T+++D YAKC
Sbjct: 421 R----DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCG 476
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
++ + F + ++K W ++S + N L +A+ LF +M K P+ T+ + L
Sbjct: 477 AIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALS 536
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
A +K+ + I ++ L+ S +VD+ S+ G + A + +P
Sbjct: 537 ACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 240/508 (47%), Gaps = 30/508 (5%)
Query: 93 GRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFV 152
G+ + ++ + E+ +G+ D F +PI+ KAC+ LS+L F
Sbjct: 23 GKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL-------------------FQ 63
Query: 153 QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGV 212
NS+ YM G+ FD M + VSWN ++ G EE L ++++ G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 213 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
EP+ +T+V V+ AC L G ++H V GF G V+N++L MY + A
Sbjct: 124 EPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 273 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFG 331
L +EM E DV++W+ +I Y+ + + L L + M+ E +P+ V+V S+L AC
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 332 SLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL 390
++ G+ +H ++IR+ + ++V V +LIDMY+K + +++VF +T+ + WN++L
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 391 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 450
+GF+HN EA+++F M+ + V+ D T SLL +IH +IR G+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
S L+D Y+ C + A + + + + G + A+S+F
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA--GRSDEAISIFC 418
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 570
M + PN IT S+L+ACS + + +++ I + T I+D +
Sbjct: 419 HMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC 475
Query: 571 GQLNDAYNLIRTMPIKPNHAVWGALLGA 598
G + A + K N W ++ A
Sbjct: 476 GAIEMARRTFDQITEK-NIISWTVIISA 502
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ D++ + + S +TM+ GR +A+++F M + P+ T ++ ACS +
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSA 440
Query: 130 FLDMGVGVHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L HG+ + + D V S++ Y G E A+ FD + E+ ++SW +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ Y N ++AL +++ M G P+ T ++ L AC V+ G + + E+
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDE---TDVVTWTTLING 291
++ + ++DM + G++ A L + E W +++G
Sbjct: 561 PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG 606
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 308/612 (50%), Gaps = 28/612 (4%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIH----SGLTLPDNFTYPIIIKACSDL------ 128
LF+ N ++ YV+ G DALNLF EM S +TL + I S L
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHE 143
Query: 129 -------SFLDMGVGV---------HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 172
SFL + V + H K G+D + FV +L+ Y G + A+ V
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 173 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 232
F+ + + +V W +++ Y N E++L++ + M AG P+ T + L A L
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 233 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY 292
+ + VH + + + + V +L +Y + G M +A+ + NEM + DVV W+ +I +
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 293 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
NG A+ L M V PN +++S+L+ C G+ LH ++ + ++
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
V ALID+YAKC + + K+F + S K WN ++ G+ + +A +F++ L
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN 443
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
V TF+S L A A LA + + +H I++ ++ V++ L+D+Y+KCG + +A
Sbjct: 444 QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFA 503
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
+FN + Y HG G A+ + + M +PN +TF VL CS
Sbjct: 504 QSVFN--EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 592
+AGL+D+G F+ M++ H I P ++HYTC++ LLGR+GQL+ A LI +P +P+ +W
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIW 621
Query: 593 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
A+L A ++ N E +A ++ P++ YVL++N+YA +W + ++R + +
Sbjct: 622 RAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEM 681
Query: 653 GLRKLPAQSLVE 664
G++K P S +E
Sbjct: 682 GVKKEPGLSWIE 693
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 206/412 (50%), Gaps = 2/412 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ + + + W ++ YV+ G D+L L M +G +P+N+T+ +KA L
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF-MPNNYTFDTALKASIGLG 261
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
D GVHG K + LD V LL +Y G+ A VF+ M + VV W+ MI
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
+ +N EA+ ++ RM +A V P+ T+ S+L C + K LG ++H LV + GF
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ V NA++D+Y KC +M A L E+ + V+W T+I GY G+ A + R L
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
V V+ +S L AC S S++ G +H AI+ +V V +LIDMYAKC
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ VF + A WNAL+SG+ + L R+A+++ M +D +P+ TF +L +
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 430 VLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
+ Q +IR G LE + +V + + G L A + IP
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIP 613
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 223/500 (44%), Gaps = 11/500 (2%)
Query: 114 DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 173
D+ Y +++ C + +H K G LD F N LL Y+ AG + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 174 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE 233
D M E+ VS+ T+ GY ++ + +Y+R+ G E + S L L E
Sbjct: 108 DEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 234 LGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI 293
+ +H+ + + G+ N V A+++ Y CG + A + + D+V W +++ Y+
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 294 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
NG +L L M + G PN + + L A G+ ++ K +H ++ +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
V L+ +Y + + ++KVF + K PW+ +++ F N EA+ LF +M
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
V P+ T +S+L A+ +H +++ GF + V++ L+D+Y+KC + A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 533
+F L Y G G A S+F + +++ V ++TF+S L AC+
Sbjct: 404 KLF--AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 534 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWG 593
+D G+ + +K + V +ID+ + G + A ++ M + A W
Sbjct: 462 LASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWN 519
Query: 594 ALLGACVSHENVELGEVAAR 613
AL+ +H LG A R
Sbjct: 520 ALISGYSTH---GLGRQALR 536
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/485 (33%), Positives = 262/485 (54%), Gaps = 8/485 (1%)
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
S+NT+++ Y ++ + Y + G PD T V ACG + G+++H +V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 302
+ GF+ ++ V+N+++ Y CG+ + A + EM DVV+WT +I G+ G + AL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 303 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY 362
M V+PNL + +L + G G L+ GK +H +++ + ALIDMY
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 363 AKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATF 421
KC + + +VF + KK WN+++SG +H +EAI LF M ++PD
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
S+L A A L + +H Y++ +G + + + +VD+Y+KCG + A IFN I
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI-- 367
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
HGHG ++ F +MV+ G +PN +TF + L+AC H GLVDEG
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Query: 542 SLF-KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
F K +++ + P ++HY C+IDLL RAG L++A L++ MP+KP+ + GA+L AC
Sbjct: 428 RYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACK 487
Query: 601 SHENV-ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPA 659
+ + EL + ++E E++G YVLL+N++AA RW D +R ++ V G+ K+P
Sbjct: 488 NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPG 547
Query: 660 QSLVE 664
S +E
Sbjct: 548 SSYIE 552
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 218/407 (53%), Gaps = 7/407 (1%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
S FS+NT++ Y +P + + + +G + PD FT+P + KAC S + G +
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-PDMFTFPPVFKACGKFSGIREGKQI 128
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
HG+ K GF D +VQNSL+ Y GE A VF M + VVSW +I G+ R
Sbjct: 129 HGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLY 188
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 257
+EAL +++M VEP+ AT V VL + G + + LG+ +H L+ ++ ++ NA+
Sbjct: 189 KEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 258 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL-EGVKPN 316
+DMYVKC Q+ +A + E+++ D V+W ++I+G + ++ A+ L +M G+KP+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
+ S+LSAC S G++++G+ +H + + ++ + + TA++DMYAKC + ++F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 377 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
K WNALL G + E+++ F++M+ +P+ TF + L A + +
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 437 AMN-IHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
H R L+ +LE ++D+ + G L A + +P+
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPV 472
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 141/269 (52%), Gaps = 5/269 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +P R + SW ++ + + G +AL+ F +M P+ TY ++ + +
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD----VEPNLATYVCVLVSSGRVG 218
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G G+HG+ K + N+L+ MY+ + A VF ++++ VSWN+MI+
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 190 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G R++EA+ +++ M +G++PD + SVL AC L V+ GR VH + G
Sbjct: 279 GLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ + A++DMY KCG ++ A + N + +V TW L+ G ++G +L M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+ G KPNLV+ + L+AC G ++ G+
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGR 427
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F L ++ SWN+M+ V R +A++LF M S PD ++ AC+ L
Sbjct: 261 VFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLG 320
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+D G VH AG DT + +++ MY G E A +F+ ++ + V +WN ++
Sbjct: 321 AVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLG 380
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-- 247
G + E+LR + M+ G +P+ T ++ L AC V+ GR +K + +
Sbjct: 381 GLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
+ + M+D+ + G + EA L M
Sbjct: 441 FPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 191/605 (31%), Positives = 303/605 (50%), Gaps = 31/605 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
L ++ +R LF+ ++ +YV+ ++ S L ++F + C LS
Sbjct: 15 LLKSVAERDLFTGKSLHALYVK------------SIVASSTYLSNHFVN--LYSKCGRLS 60
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ F + + + F N ++ Y + A+ +FD + + VS+NT+I+
Sbjct: 61 YARAA-------FYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLIS 113
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY A+ ++ RM G E D T+ ++ AC V+L +++H GF
Sbjct: 114 GYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDS 171
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDE-TDVVTWTTLINGYILNGDARSALMLCRVM 308
V NA + Y K G ++EA + MDE D V+W ++I Y + + AL L + M
Sbjct: 172 YSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM 231
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN-C 367
+ +G K ++ ++AS+L+A S L G+ H I+ V + LID Y+KC C
Sbjct: 232 IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC 291
Query: 368 GNL--SYKVFMKTSKKRTAPWNALLSGFIHNS-LVREAIQLFKQMLVKDVQPDNATFNSL 424
+ S KVF + WN ++SG+ N L EA++ F+QM +PD+ +F +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
A + L+ Q IH I+S R+ V + L+ +Y K G+L A +F+ +P
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP--E 409
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
Y +HGHG A+ L+ +M+ SG+ PN+ITF +VL AC+H G VDEG
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 544 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 603
F M + +I P +HY+C+IDLLGRAG+L +A I MP KP W ALLGAC H+
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
Query: 604 NVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
N+ L E AA ++P YV+LAN+YA +W + +VR + +RK P S +
Sbjct: 530 NMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Query: 664 EVRSE 668
EV+ +
Sbjct: 590 EVKKK 594
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 288/514 (56%), Gaps = 12/514 (2%)
Query: 165 EKEQAQLVFDLMKEQT-VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVL 223
E++ +F+ ++T V SWN++I R+ + EAL ++ M + P ++ +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAI 83
Query: 224 PACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV 283
AC L ++ G++ H G+ ++ V +A++ MY CG++++A + +E+ + ++V
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 284 TWTTLINGYILNGDARSALMLCRVMLLE------GVKPNLVSVASLLSACGSFGSLNYGK 337
+WT++I GY LNG+A A+ L + +L++ + + + + S++SAC + +
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIH 395
+H++ I++ + V V L+D YAK G ++ K+F + K +N+++S +
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 396 NSLVREAIQLFKQMLVKDVQPDNA-TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+ + EA ++F++++ V NA T +++L A + L+ IH +IR G +
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
V + ++D+Y KCG + A F+ + YG HGH A+ LF M+
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFD--RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
SGV+PN ITF SVL ACSHAGL EG F M + + P ++HY C++DLLGRAG L
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Query: 575 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 634
AY+LI+ M +KP+ +W +LL AC H+NVEL E++ FEL+ N G Y+LL+++YA
Sbjct: 442 KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYA 501
Query: 635 AVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
GRW+D E VR ++ GL K P SL+E+ E
Sbjct: 502 DAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGE 535
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 192/363 (52%), Gaps = 10/363 (2%)
Query: 74 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 133
+ + +FSWN+++ + G +AL F M L P ++P IKACS L +
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSL-YPTRSSFPCAIKACSSLFDIFS 94
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G H F G+ D FV ++L+ MY G+ E A+ VFD + ++ +VSW +MI GY
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 194 NNRAEEALRVYNRMM------DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
N A +A+ ++ ++ D + D +VSV+ AC + L +H+ V ++GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 248 WGNMVVRNAMLDMYVKCGQ--MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
+ V N +LD Y K G+ + A + +++ + D V++ ++++ Y +G + A +
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 306 RVMLLEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
R ++ V N ++++++L A G+L GKC+H IR LE +VIV T++IDMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C + K F + K W A+++G+ + +A++LF M+ V+P+ TF S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 425 LPA 427
L A
Sbjct: 395 LAA 397
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 8/270 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI-----HSGLTLPDNFTYPIIIKA 124
+FD +P+R++ SW +M+R Y G DA++LF +++ D+ +I A
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA 192
Query: 125 CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEK--EQAQLVFDLMKEQTVV 182
CS + + +H K GFD V N+LL Y GE A+ +FD + ++ V
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
S+N++++ Y ++ + EA V+ R++ + V + T+ +VL A + +G+ +H
Sbjct: 253 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ 312
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 301
V G +++V +++DMY KCG+++ A + M +V +WT +I GY ++G A A
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA 372
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFG 331
L L M+ GV+PN ++ S+L+AC G
Sbjct: 373 LELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + S+N++M +Y Q G ++A +F ++ + + + T ++ A S
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G +H + G + D V S++ MY G E A+ FD MK + V SW MI
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKNVELGREVHALVKEKG 246
GY + A +AL ++ M+D+GV P+ T VSVL AC GL +VE R +A+ G
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL--HVEGWRWFNAMKGRFG 419
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 289
+ M+D+ + G +++A+ L M + D + W++L+
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 308/600 (51%), Gaps = 5/600 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF +L SW M+ V + +AL + EM+ +G+ P+ FT+ ++ A S L
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP-PNEFTFVKLLGASSFLG 239
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G +H G L+ ++ SL+ Y + E A V + EQ V W ++++
Sbjct: 240 -LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ RN RA+EA+ + M G++P+ T ++L C +++++ G+++H+ + GF
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 250 NMVVRNAMLDMYVKCGQMK-EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V NA++DMY+KC + EA + M +VV+WTTLI G + +G + L M
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ V+PN+V+++ +L AC + +HA+ +R+ ++ E++V +L+D YA
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ ++ V ++ + +L++ F A+ + M ++ D + + A
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
A L L+ ++HCY ++SGF V + LVD+YSKCGSL A +F I
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA--TPDVVS 596
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
+G A+S F +M +P+ +TF +L ACS+ L D GL F+ M
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
K + I P V+HY ++ +LGRAG+L +A ++ TM +KPN ++ LL AC N+ LG
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
E A L P + Y+LLA+LY G+ A+ R+++ L K +S VEV+ +
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 285/564 (50%), Gaps = 9/564 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + R++F+W M+ + + AL+LF EM+ SG T P+ FT+ ++++C+ L
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG-THPNEFTFSSVVRSCAGLR 138
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G VHG K GF+ ++ V +SL +Y G+ ++A +F ++ +SW MI+
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
+ EAL+ Y+ M+ AGV P+ T V +L A L +E G+ +H+ + +G
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPL 257
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N+V++ +++D Y + +M++A + N E DV WT++++G++ N A+ A+ M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G++PN + +++LS C + SL++GK +H+ I+ E V AL+DMY KC+
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 370 L-SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ + +VF W L+ G + + V++ L +M+ ++V+P+ T + +L A
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ L +++ + IH YL+R + V + LVD Y+ + YA ++ I +
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNV--IRSMKRRDNIT 495
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
+ + G EMA+S+ N M G++ +Q++ + A ++ G ++ G L + +
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE-- 606
K ++D+ + G L DA + + P+ W L+ S+ +
Sbjct: 556 KS-GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFISSA 613
Query: 607 LGEVAARWTFELEPENTGNYVLLA 630
L E EP++ +LL+
Sbjct: 614 LSAFEEMRMKETEPDSVTFLILLS 637
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 234/457 (51%), Gaps = 5/457 (1%)
Query: 133 MGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 192
+G+ +H K G + + N+LL++Y+ A+ +FD M +TV +W MI+ +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
++ AL ++ MM +G P+ T SV+ +C L+++ G VH V + GF GN V
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
V +++ D+Y KCGQ KEA L + + D ++WT +I+ + R AL M+ G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
V PN + LL A SF L +GK +H+ I + + V+++T+L+D Y++ + +
Sbjct: 221 VPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
+V + ++ W +++SGF+ N +EA+ F +M +QP+N T++++L + +
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNIIPLXXXXXXXXXX 491
L IH I+ GF +V + LVD+Y KC S A +F +
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG--AMVSPNVVSWTT 397
Query: 492 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
HG + L +MV+ V+PN +T + VL ACS V L + ++L++H
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 588
+V + ++D + +++ A+N+IR+M + N
Sbjct: 458 VDGEMVVGNS-LVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 41/340 (12%)
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
S +LS C S S G +H I+ L + + L+ +Y K + + K+F +
Sbjct: 26 SCIRILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
S + W ++S F + A+ LF++M+ P+ TF+S++ + A L D+
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 439 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 498
+H +I++GF V S L D+YSKCG A +F+ + G
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISSLVGA 203
Query: 499 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL-V 557
E A+ +++MV++GV PN+ TF +L A S GL + G ++ ++ + IPL V
Sbjct: 204 RKWRE-ALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRG--IPLNV 259
Query: 558 DHYTCIIDLLGRAGQLNDAYNLI----------------------------------RTM 583
T ++D + ++ DA ++ R++
Sbjct: 260 VLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL 319
Query: 584 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 623
++PN+ + A+L C + +++ G+ T ++ E++
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 270/515 (52%), Gaps = 3/515 (0%)
Query: 152 VQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 211
V NSLL++Y G+ A +FD M + V+S N + G+ RN E + RM+ +G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 212 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 271
D AT+ VL C + + + +HAL G+ + V N ++ Y KCG
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 272 WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG 331
+ + M +V+T T +I+G I N L L +M V PN V+ S L+AC
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 332 SLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLS 391
+ G+ +HA + +ESE+ +E+AL+DMY+KC ++ +F T++ +L
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
G N EAIQ F +ML V+ D +++L + L +H +I+ F
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 511
V + L+++YSKCG L + +F +P + +HGHG A+ L+ +
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMP--KRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 512 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 571
M V+P +TF S+LHACSH GL+D+G L M + H I P +HYTCIID+LGRAG
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 572 QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLAN 631
L +A + I ++P+KP+ +W ALLGAC H + E+GE AA F+ P+++ ++L+AN
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 632 LYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
+Y++ G+W++ + +G+ K S +E+
Sbjct: 569 IYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 201/419 (47%), Gaps = 15/419 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P R + S N + +++ L M+ SG D+ T I++ C
Sbjct: 112 LFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DHATLTIVLSVCDTPE 169
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
F + +H + +G+D + V N L+ Y G + VFD M + V++ +I+
Sbjct: 170 FCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVIS 229
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G N E+ LR+++ M V P+ T +S L AC + + G+++HAL+ + G
Sbjct: 230 GLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIES 289
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ + +A++DMY KCG +++AW + E D V+ T ++ G NG A+ ML
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
GV+ + V+++L SL GK LH+ I++K V LI+MY+KC
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLT 409
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA-- 427
S VF + K+ WN++++ F + A++L+++M +V+P + TF SLL A
Sbjct: 410 DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS 469
Query: 428 YAVLAD-----LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ L D L + +H G R E + ++D+ + G L A + +PL
Sbjct: 470 HVGLIDKGRELLNEMKEVH------GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPL 522
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 25/383 (6%)
Query: 228 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 287
++KN E V A + +VV N++L +Y KCG++ +A L +EM DV++
Sbjct: 71 IIKNPEFFEPVDADIHRNA----LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
+ G++ N + S +L + ML G + ++ +LS C + K +HA AI
Sbjct: 127 VFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSG 185
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
+ E+ V LI Y KC C VF S + A++SG I N L + ++LF
Sbjct: 186 YDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFS 245
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
M V P++ T+ S L A + + + IH L + G L + S L+D+YSKCG
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 527
S+ A IF ++G E A+ F +M+Q+GV+ + ++V
Sbjct: 306 SIEDAWTIFE--STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 528 LHACSHAGLVDEGLSLFKFMLKQHQII--------PLVDHYTCIIDLLGRAGQLNDAYNL 579
L +D L L K + H ++ V++ +I++ + G L D+ +
Sbjct: 364 L----GVSFIDNSLGLGK---QLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTV 414
Query: 580 IRTMPIKPNHAVWGALLGACVSH 602
R MP K N+ W +++ A H
Sbjct: 415 FRRMP-KRNYVSWNSMIAAFARH 436
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/592 (30%), Positives = 295/592 (49%), Gaps = 41/592 (6%)
Query: 116 FTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDL 175
++ ++ C + G +H +G + D+ + L+ Y ++AQ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 176 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+ + WN +I Y RN R +E++ VY RMM G+ D T SV+ AC L + G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
R VH ++ N+ V NA++ MY + G++ A L + M E D V+W +IN Y
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 296 GDARSALMLCRVMLLEGVKPNLV---------------------------------SVAS 322
A L M L GV+ ++V SVA
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 323 L--LSACGSFGSLNYGKCLHAWAIRQKLESEVI--VETALIDMYAKCNCGNLSYKVFMKT 378
+ L AC G+L +GK H IR S I V +LI MY++C+ ++ VF +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
+ WN+++SGF +N E L K+ML+ P++ T S+LP +A + +L+
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 439 NIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
HCY++R + L + + LVD+Y+K G + A +F+ + YG
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYG 501
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
+ G GE+A++ F M +SG++P+ +T +VL ACSH+ LV EG LF M I +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA-RWTF 616
+HY+C++DL RAG L+ A ++ T+P +P+ A+ LL AC+ H N +GE AA +
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 617 ELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
E +PE+ G+Y+LLA++YA G W V+ +++ +G++K +L+E SE
Sbjct: 622 ETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE 673
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 215/449 (47%), Gaps = 62/449 (13%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
WN ++ Y++ R ++++++ M+ G+ D FTYP +IKAC+ L G VHG
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIR-ADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 201
+ + +V N+L++MY G+ + A+ +FD M E+ VSWN +IN Y + EA
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 202 RVYNRMMDAGVEPDCAT-----------------------------------VVSVLPAC 226
++ +RM +GVE T +++ L AC
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 227 GLLKNVELGREVHALVKEKGFWGNMV--VRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 284
+ ++ G+ H LV + + + VRN+++ MY +C ++ A+ + +++ + T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
W ++I+G+ N + L + MLL G PN +++AS+L G+L +GK H + +
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 345 -RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
RQ + +I+ +L+DMYAK + +VF K+ + +L+ G+ A+
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLY----------- 451
FK M ++PD+ T ++L A + H L+R G +L+
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACS-----------HSNLVREGHWLFTKMEHVFGIRL 559
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIP 480
RLE S +VD+Y + G L A IF+ IP
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 33/384 (8%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPII--IKACSDLSFLDM 133
+ S+ +WNT+ ++ G ALN V M + + + + +I +KACS + L
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLKACSHIGALKW 338
Query: 134 GVGVHGMTFKA---GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
G H + ++ D+D V+NSL+ MY + A +VF ++ ++ +WN++I+G
Sbjct: 339 GKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWG 249
+ N R+EE + M+ +G P+ T+ S+LP + N++ G+E H +++ + +
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+++ N+++DMY K G++ A + + M + D VT+T+LI+GY G AL + M
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD 517
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCL-----HAWAIRQKLESEVIVETALIDMYAK 364
G+KP+ V++ ++LSAC + G L H + IR +LE + ++D+Y +
Sbjct: 518 RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCR 573
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALL--SGFIHNS------------LVREAIQLFKQML 410
+ + +F + ++ A L + IH + L + L ML
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 411 VKDVQPDNATFNSLLPAYAVLADL 434
+ D+ +++ L+ +L+DL
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDL 657
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 15/297 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + SL +WN+++ + R + L EM+ SG P++ T I+ + +
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH-PNHITLASILPLFARVG 437
Query: 130 FLDMGVGVHGMTFKAGFDLDTFV-QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L G H + D + NSL+ MY +GE A+ VFD M+++ V++ ++I
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+GY R + E AL + M +G++PD T+V+VL AC + L RE H L +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS---HSNLVREGHWLFTKMEHV 554
Query: 249 GNMVVR----NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 303
+ +R + M+D+Y + G + +A + + + E TL+ +++G+
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 304 LCRVMLLEGVKPNLVS----VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
+LLE KP + +A + + GS+ L K L + QK ++ET
Sbjct: 615 AADKLLLE-TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
L S ASLLS C F G+ LHA I LE + ++ L+ Y+ N + + +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 377 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
+ PWN L+ +I N +E++ ++K+M+ K ++ D T+ S++ A A L D
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
+H + S L V + L+ +Y + G + A +F+ + Y
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD--RMSERDAVSWNAIINCY 260
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
A L ++M SGV+ + +T+ ++ C AG
Sbjct: 261 TSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/592 (30%), Positives = 295/592 (49%), Gaps = 41/592 (6%)
Query: 116 FTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDL 175
++ ++ C + G +H +G + D+ + L+ Y ++AQ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 176 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+ + WN +I Y RN R +E++ VY RMM G+ D T SV+ AC L + G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
R VH ++ N+ V NA++ MY + G++ A L + M E D V+W +IN Y
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 296 GDARSALMLCRVMLLEGVKPNLV---------------------------------SVAS 322
A L M L GV+ ++V SVA
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 323 L--LSACGSFGSLNYGKCLHAWAIRQKLESEVI--VETALIDMYAKCNCGNLSYKVFMKT 378
+ L AC G+L +GK H IR S I V +LI MY++C+ ++ VF +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
+ WN+++SGF +N E L K+ML+ P++ T S+LP +A + +L+
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 439 NIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
HCY++R + L + + LVD+Y+K G + A +F+ + YG
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYG 501
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
+ G GE+A++ F M +SG++P+ +T +VL ACSH+ LV EG LF M I +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA-RWTF 616
+HY+C++DL RAG L+ A ++ T+P +P+ A+ LL AC+ H N +GE AA +
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 617 ELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
E +PE+ G+Y+LLA++YA G W V+ +++ +G++K +L+E SE
Sbjct: 622 ETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE 673
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 215/449 (47%), Gaps = 62/449 (13%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
WN ++ Y++ R ++++++ M+ G+ D FTYP +IKAC+ L G VHG
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIR-ADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 201
+ + +V N+L++MY G+ + A+ +FD M E+ VSWN +IN Y + EA
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 202 RVYNRMMDAGVEPDCAT-----------------------------------VVSVLPAC 226
++ +RM +GVE T +++ L AC
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 227 GLLKNVELGREVHALVKEKGFWGNMV--VRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 284
+ ++ G+ H LV + + + VRN+++ MY +C ++ A+ + +++ + T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
W ++I+G+ N + L + MLL G PN +++AS+L G+L +GK H + +
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 345 -RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
RQ + +I+ +L+DMYAK + +VF K+ + +L+ G+ A+
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLY----------- 451
FK M ++PD+ T ++L A + H L+R G +L+
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACS-----------HSNLVREGHWLFTKMEHVFGIRL 559
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIP 480
RLE S +VD+Y + G L A IF+ IP
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 33/384 (8%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPII--IKACSDLSFLDM 133
+ S+ +WNT+ ++ G ALN V M + + + + +I +KACS + L
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLKACSHIGALKW 338
Query: 134 GVGVHGMTFKA---GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
G H + ++ D+D V+NSL+ MY + A +VF ++ ++ +WN++I+G
Sbjct: 339 GKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWG 249
+ N R+EE + M+ +G P+ T+ S+LP + N++ G+E H +++ + +
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+++ N+++DMY K G++ A + + M + D VT+T+LI+GY G AL + M
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMD 517
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCL-----HAWAIRQKLESEVIVETALIDMYAK 364
G+KP+ V++ ++LSAC + G L H + IR +LE + ++D+Y +
Sbjct: 518 RSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEH----YSCMVDLYCR 573
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALL--SGFIHNS------------LVREAIQLFKQML 410
+ + +F + ++ A L + IH + L + L ML
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 411 VKDVQPDNATFNSLLPAYAVLADL 434
+ D+ +++ L+ +L+DL
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDL 657
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 15/297 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + SL +WN+++ + R + L EM+ SG P++ T I+ + +
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH-PNHITLASILPLFARVG 437
Query: 130 FLDMGVGVHGMTFKAGFDLDTFV-QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L G H + D + NSL+ MY +GE A+ VFD M+++ V++ ++I
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+GY R + E AL + M +G++PD T+V+VL AC + L RE H L +
Sbjct: 498 DGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS---HSNLVREGHWLFTKMEHV 554
Query: 249 GNMVVR----NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 303
+ +R + M+D+Y + G + +A + + + E TL+ +++G+
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 304 LCRVMLLEGVKPNLVS----VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
+LLE KP + +A + + GS+ L K L + QK ++ET
Sbjct: 615 AADKLLLE-TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
L S ASLLS C F G+ LHA I LE + ++ L+ Y+ N + + +
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 377 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
+ PWN L+ +I N +E++ ++K+M+ K ++ D T+ S++ A A L D
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
+H + S L V + L+ +Y + G + A +F+ + Y
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD--RMSERDAVSWNAIINCY 260
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
A L ++M SGV+ + +T+ ++ C AG
Sbjct: 261 TSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/580 (30%), Positives = 287/580 (49%), Gaps = 40/580 (6%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYM--NAGEKEQAQLVFDLMKE 178
+I+ C L L HG + G D + + L AM + E A+ VFD + +
Sbjct: 36 LIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 179 QTVVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGRE 237
+WNT+I Y ++ + M+ ++ P+ T ++ A + ++ LG+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
+H + + ++ V N+++ Y CG + A + + E DVV+W ++ING++ G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
AL L + M E VK + V++ +LSAC +L +G+ + ++ ++ + + A
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 358 LIDMYAKCNC--------------GNLSY-----------------KVFMKTSKKRTAPW 386
++DMY KC N+++ +V +K W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 387 NALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 445
NAL+S + N EA+ +F ++ L K+++ + T S L A A + L+ IH Y+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 446 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
+ G V S L+ +YSKCG L + +FN + HG G A
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 565
V +F +M ++ V+PN +TFT+V ACSH GLVDE SLF M + I+P HY CI+D
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 566 LLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 625
+LGR+G L A I MPI P+ +VWGALLGAC H N+ L E+A ELEP N G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 626 YVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+VLL+N+YA +G+W + +R + V GL+K P S +E+
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 235/445 (52%), Gaps = 33/445 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+ + F+WNT++R Y P ++ F++M+ P+ +T+P +IKA +++S
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G +HGM K+ D FV NSL+ Y + G+ + A VF +KE+ VVSWN+MIN
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ + ++AL ++ +M V+ T+V VL AC ++N+E GR+V + ++E
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA-------- 301
N+ + NAMLDMY KCG +++A L + M+E D VTWTT+++GY ++ D +A
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 302 ------------------------LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
++ + L + +K N +++ S LSAC G+L G+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 397
+H++ + + V +ALI MY+KC S +VF K+ W+A++ G +
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEVA 456
EA+ +F +M +V+P+ TF ++ A + + +A ++ H G + +
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 457 SILVDIYSKCGSLGYAHHIFNIIPL 481
+ +VD+ + G L A +P+
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPI 530
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 123/248 (49%), Gaps = 9/248 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-IHSGLTLPDNFTYPIIIKACSDL 128
+ +++PQ+ + +WN ++ Y Q G+P++AL +F E+ + + L + T + AC+ +
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL-NQITLVSTLSACAQV 378
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L++G +H K G ++ V ++L+ MY G+ E+++ VF+ ++++ V W+ MI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKNVELGREVHALVKEK 245
G + EA+ ++ +M +A V+P+ T +V AC GL+ E H +
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAE--SLFHQMESNY 496
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALML 304
G ++D+ + G +++A M W L+ ++ + A M
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 305 C-RVMLLE 311
C R++ LE
Sbjct: 557 CTRLLELE 564
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 278/559 (49%), Gaps = 43/559 (7%)
Query: 149 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 208
D F+ + L++ Y QA VFD + + S+N ++ Y +A ++ +
Sbjct: 56 DNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 209 DA------GVEPDCATVVSVLPACGLLKNVELG---REVHALVKEKGFWGNMVVRNAMLD 259
+ PD ++ VL A + LG R+VH V GF ++ V N M+
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMIT 175
Query: 260 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVKPNLV 318
Y KC ++ A + +EM E DVV+W ++I+GY +G + + ML KPN V
Sbjct: 176 YYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
+V S+ ACG L +G +H I ++ ++ + A+I YAKC + + +F +
Sbjct: 236 TVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEM 295
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLF-------------------------------K 407
S+K + + A++SG++ + LV+EA+ LF +
Sbjct: 296 SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR 355
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
+M+ +P+ T +SLLP+ ++LK IH + IR+G + V + ++D Y+K G
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 527
L A +F+ Y HG + A SLF+QM G +P+ +T T+V
Sbjct: 416 FLLGAQRVFD--NCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 528 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKP 587
L A +H+G D +F ML ++ I P V+HY C++ +L RAG+L+DA I MPI P
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 588 NHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 647
VWGALL ++E+ A FE+EPENTGNY ++ANLY GRW +AE VR+
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 648 MVNVVGLRKLPAQSLVEVR 666
+ +GL+K+P S +E
Sbjct: 594 KMKRIGLKKIPGTSWIETE 612
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 216/453 (47%), Gaps = 41/453 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI-----HSGLTLPDNFTYPIIIKA 124
+FD + R+ FS+N ++ Y DA +LF+ I S PD+ + ++KA
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 125 ---CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 181
C D + VHG + GFD D FV N ++ Y E A+ VFD M E+ V
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV 198
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMD-AGVEPDCATVVSVLPACGLLKNVELGREVHA 240
VSWN+MI+GY ++ E+ ++Y M+ + +P+ TV+SV ACG ++ G EVH
Sbjct: 199 VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHK 258
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ E ++ + NA++ Y KCG + A L +EM E D VT+ +I+GY+ +G +
Sbjct: 259 KMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKE 318
Query: 301 ALML-------------------------------CRVMLLEGVKPNLVSVASLLSACGS 329
A+ L R M+ G +PN V+++SLL +
Sbjct: 319 AMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTY 378
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 389
+L GK +HA+AIR ++ + V T++ID YAK + +VF + W A+
Sbjct: 379 SSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAI 438
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSG 448
++ + + A LF QM +PD+ T ++L A+A D A +I L +
Sbjct: 439 ITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYD 498
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+E + +V + S+ G L A + +P+
Sbjct: 499 IEPGVEHYACMVSVLSRAGKLSDAMEFISKMPI 531
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/579 (31%), Positives = 310/579 (53%), Gaps = 20/579 (3%)
Query: 97 DALNLFVEMIHSGLTLPDNFTYPIIIKACS--DLSFLDMGVGVHGMTFKAGFDLDTFVQN 154
+AL L+ IHS T P +IKAC+ FL +G +H + KAG D DT V N
Sbjct: 28 EALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFL-LGAQLHCLCLKAGADCDTVVSN 86
Query: 155 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
SL++MY K + VFD M + VS+ ++IN ++ EA+++ M G P
Sbjct: 87 SLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIP 146
Query: 215 DCATVVSVLPACGLL-KNVELGREVHALV-KEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
V S+L C + + ++ R HALV ++ ++++ A++DMY+K A+
Sbjct: 147 KSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFH 206
Query: 273 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 332
+ ++M+ + V+WT +I+G + N + + L R M E ++PN V++ S+L AC
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC---VE 263
Query: 333 LNYG----KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY-KVFMKTSKKR-TAPW 386
LNYG K +H ++ R ++ + A + MY C CGN+S +V +TSK R W
Sbjct: 264 LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMY--CRCGNVSLSRVLFETSKVRDVVMW 321
Query: 387 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
++++SG+ E + L QM + ++ ++ T +++ A L A +H +++
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 447 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAV 506
GF+ + + + L+D+Y+KCGSL A +F L YG HGHG A+
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVF--YELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 507 SLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDL 566
+F M++ G + + + F ++L AC+HAGLV+E ++F K H + L +HY C I+L
Sbjct: 440 EIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTL-EHYACYINL 498
Query: 567 LGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL-GEVAARWTFELEPENTGN 625
LGR G+++DA+ + MP+KP+ +W +LL AC +H +++ G++ A + EP+N N
Sbjct: 499 LGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPAN 558
Query: 626 YVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
YVLL+ ++ G + AE VR ++ L K S +E
Sbjct: 559 YVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 177/361 (49%), Gaps = 4/361 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL- 128
+FD + R S+ +++ Q G ++A+ L EM G +P + ++ C+ +
Sbjct: 104 VFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGF-IPKSELVASLLALCTRMG 162
Query: 129 SFLDMGVGVHGMTF-KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
S + H + + +L+ MY+ + A VFD M+ + VSW M
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK-NVELGREVHALVKEKG 246
I+G N E + ++ M + P+ T++SVLPAC L L +E+H G
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHG 282
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
+ + A + MY +CG + + L DVV W+++I+GY GD + L
Sbjct: 283 CHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLN 342
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M EG++ N V++ +++SAC + L++ +H+ ++ S +++ ALIDMYAKC
Sbjct: 343 QMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCG 402
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ + +VF + ++K W+++++ + + EA+++FK M+ + D+ F ++L
Sbjct: 403 SLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILS 462
Query: 427 A 427
A
Sbjct: 463 A 463
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 177/351 (50%), Gaps = 4/351 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + ++ SW M+ V ++LF M L P+ T ++ AC +L+
Sbjct: 207 VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR-PNRVTLLSVLPACVELN 265
Query: 130 FLDMGVG-VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ V +HG +F+ G D + + + MY G ++++F+ K + VV W++MI
Sbjct: 266 YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+GY E + + N+M G+E + T+++++ AC + VH+ + + GF
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++++ NA++DMY KCG + A + E+ E D+V+W+++IN Y L+G AL + + M
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ G + + ++ ++LSAC G + + + A + + + I++ +
Sbjct: 446 IKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKI 505
Query: 369 NLSYKVFMKTSKKRTAP-WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
+ +++V + K +A W++LLS + + A ++ L+K +PDN
Sbjct: 506 DDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS-EPDN 555
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 286/556 (51%), Gaps = 13/556 (2%)
Query: 120 IIIKACSDLSFLDMGVGVHGMTFKAGFDLDT----FVQNSLLAMYMNAGEKEQAQLVFDL 175
+++K S + +G VH K LD+ F+ N L+ MY E A+LV L
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 176 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+ VVSW ++I+G +N AL + M GV P+ T A L+ G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
+++HAL + G ++ V + DMY K +A L +E+ E ++ TW I+ + +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 296 GDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIV 354
G R A+ ++G PN ++ + L+AC + LN G LH +R +++V V
Sbjct: 188 GRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 355 ETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV 414
LID Y KC S +F + K W +L++ ++ N +A L+ + V
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 415 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 474
+ + +S+L A A +A L+ +IH + +++ + V S LVD+Y KCG + +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 475 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV--QPNQITFTSVLHACS 532
F+ +P Y G +MA++LF +M G PN +TF S+L ACS
Sbjct: 367 AFDEMP--EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 592
AG V+ G+ +F M + I P +HY+CI+D+LGRAG + AY I+ MPI+P +VW
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 593 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
GAL AC H +LG +AA F+L+P+++GN+VLL+N +AA GRW +A VR+ + V
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 653 GLRKLPAQSLVEVRSE 668
G++K S + V+++
Sbjct: 545 GIKKGAGYSWITVKNQ 560
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 201/414 (48%), Gaps = 12/414 (2%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P R++ SW +++ Q G AL F EM G+ +P++FT+P KA + L G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGV-VPNDFTFPCAFKAVASLRLPVTG 127
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN 194
+H + K G LD FV S MY ++ A+ +FD + E+ + +WN I+ +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 195 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 254
R EA+ + P+ T + L AC ++ LG ++H LV GF ++ V
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
N ++D Y KC Q++ + + EM + V+W +L+ Y+ N + A +L + V+
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
+ ++S+LSAC L G+ +HA A++ +E + V +AL+DMY KC C S +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 375 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV--QPDNATFNSLLPAYAVLA 432
F + +K N+L+ G+ H V A+ LF++M + P+ TF SLL A +
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 433 DLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
++ M I Y I G E S +VD+ + G + A+ +P+
Sbjct: 428 AVENGMKIFDSMRSTYGIEPG----AEHYSCIVDMLGRAGMVERAYEFIKKMPI 477
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R+L +WN + V GRP +A+ F+E P++ T+ + ACSD
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID-GHPNSITFCAFLNACSDWL 223
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L++G+ +HG+ ++GFD D V N L+ Y + ++++F M + VSW +++
Sbjct: 224 HLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA 283
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y +N+ E+A +Y R VE + SVL AC + +ELGR +HA +
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V +A++DMY KCG ++++ +EM E ++VT +LI GY G AL L M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 310 LEGV--KPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCN 366
G PN ++ SLLSAC G++ G K + +E + ++DM +
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 367 CGNLSYKVFMKTSKKRT-APWNAL 389
+Y+ K + T + W AL
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGAL 487
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 275/525 (52%), Gaps = 10/525 (1%)
Query: 149 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN----NRAEEALRVY 204
D F+ L A + A+ + ++ ++ W+++I G+F NR L Y
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFL-AY 92
Query: 205 NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKC 264
M GV P T +L A L++ + HA + + G + VRN+++ Y
Sbjct: 93 RHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSS 151
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
G A L + ++ DVVTWT +I+G++ NG A A++ M GV N ++V S+L
Sbjct: 152 GLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVL 211
Query: 325 SACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT 383
A G + +G+ +H + +++ +V + ++L+DMY KC+C + + KVF + +
Sbjct: 212 KAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV 271
Query: 384 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
W AL++G++ + + + +F++ML DV P+ T +S+L A A + L + +HCY
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCY 331
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
+I++ + L+D+Y KCG L A +F L + HG+
Sbjct: 332 MIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE--RLHEKNVYTWTAMINGFAAHGYAR 389
Query: 504 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
A LF M+ S V PN++TF +VL AC+H GLV+EG LF M + + P DHY C+
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 564 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 623
+DL GR G L +A LI MP++P + VWGAL G+C+ H++ ELG+ AA +L+P ++
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 624 GNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
G Y LLANLY+ W + VR + + K P S +EV+ +
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGK 554
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 197/372 (52%), Gaps = 3/372 (0%)
Query: 112 LPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQL 171
+P T+P ++KA L + H K G D D FV+NSL++ Y ++G + A
Sbjct: 101 IPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASR 159
Query: 172 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 231
+FD +++ VV+W MI+G+ RN A EA+ + M GV + TVVSVL A G +++
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 232 VELGREVHALVKEKG-FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
V GR VH L E G ++ + ++++DMY KC +A + +EM +VVTWT LI
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 350
GY+ + +++ ML V PN +++S+LSAC G+L+ G+ +H + I+ +E
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 351 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 410
T LID+Y KC C + VF + +K W A+++GF + R+A LF ML
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 411 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSL 469
V P+ TF ++L A A +++ + + R + + + +VD++ + G L
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 470 GYAHHIFNIIPL 481
A + +P+
Sbjct: 460 EEAKALIERMPM 471
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 3/297 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + + +W M+ +V+ G +A+ FVEM +G+ + T ++KA +
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA-ANEMTVVSVLKAAGKVE 218
Query: 130 FLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ G VHG+ + G D F+ +SL+ MY + AQ VFD M + VV+W +I
Sbjct: 219 DVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALI 278
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY ++ ++ + V+ M+ + V P+ T+ SVL AC + + GR VH + +
Sbjct: 279 AGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIE 338
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N ++D+YVKCG ++EA + + E +V TWT +ING+ +G AR A L M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLH-AWAIRQKLESEVIVETALIDMYAK 364
L V PN V+ ++LSAC G + G+ L + R +E + ++D++ +
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGR 455
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 291/552 (52%), Gaps = 9/552 (1%)
Query: 118 YPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 177
Y +K CS + + +HG + GF + +++ L+ +Y+ G+ + A+ +FD +
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
++ VVSW MI+ + R +AL ++ M V+ + T SVL +C L ++ G +
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
+H V++ GN++VR+A+L +Y +CG+M+EA + M E D+V+W +I+GY N
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
A ++ L ++ML EG KP+ + SLL A L LH AI+ + +
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS 254
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI-HNSLVREAIQLFKQMLVKDVQP 416
L++ Y KC ++K+ T K+ AL++GF N+ +A +FK M+ +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHH 474
D +S+L +A + IH + ++S + R +VA + L+D+Y+K G + A
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI-RFDVALGNSLIDMYAKSGEIEDAVL 373
Query: 475 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 534
F + YG+HG+ E A+ L+N+M ++PN +TF S+L ACSH
Sbjct: 374 AFE--EMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHT 431
Query: 535 GLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP--IKPNHAVW 592
G + G ++ M+ +H I +H +CIID+L R+G L +AY LIR+ + + + W
Sbjct: 432 GQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTW 491
Query: 593 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
GA L AC H NV+L +VAA +EP NY+ LA++YAA G W +A N R ++
Sbjct: 492 GAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKES 551
Query: 653 G-LRKLPAQSLV 663
G K P SLV
Sbjct: 552 GSCNKAPGYSLV 563
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 222/407 (54%), Gaps = 4/407 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + +R + SW M+ + + G DAL LF EM H + FTY ++K+C DL
Sbjct: 69 LFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM-HREDVKANQFTYGSVLKSCKDLG 127
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G+ +HG K + V+++LL++Y G+ E+A+L FD MKE+ +VSWN MI+
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY N A+ + ++ M+ G +PDC T S+L A ++K +E+ E+H L + GF
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS-ALMLCRVM 308
+ + ++++ YVKCG + AW L + D+++ T LI G+ + S A + + M
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMYAKCNC 367
+ K + V V+S+L C + S+ G+ +H +A++ ++ +V + +LIDMYAK
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ F + +K W +L++G+ + +AI L+ +M + ++P++ TF SLL A
Sbjct: 368 IEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 428 YAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAH 473
+ + I+ +I + G R E S ++D+ ++ G L A+
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAY 474
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 273/517 (52%), Gaps = 7/517 (1%)
Query: 154 NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN-NRAEEALRVYNRMMDAGV 212
N L+ + G+ + +F + +E S+N MI G N E AL +Y RM +G+
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 213 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
+PD T V AC L+ + +GR VH+ + + G ++ + ++++ MY KCGQ+ A
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 273 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 332
L +E+ E D V+W ++I+GY G A+ A+ L R M EG +P+ ++ S+L AC G
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 333 LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSG 392
L G+ L AI +K+ + + LI MY KC + + +VF + KK W A+++
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 393 FIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR 452
+ N EA +LF +M V PD T +++L A + L+ I + +
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHN 368
Query: 453 LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM 512
+ VA+ LVD+Y KCG + A +F +P+ Y GH + A+ LF++M
Sbjct: 369 IYVATGLVDMYGKCGRVEEALRVFEAMPV--KNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 513 VQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 572
V P+ ITF VL AC HAGLV +G F M ++P ++HYT IIDLL RAG
Sbjct: 427 ---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGM 483
Query: 573 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL-EPENTGNYVLLAN 631
L++A+ + P KP+ + A+LGAC ++V + E A R E+ E +N GNYV+ +N
Sbjct: 484 LDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSN 543
Query: 632 LYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+ A + W ++ +R ++ G+ K P S +E+ E
Sbjct: 544 VLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGE 580
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 214/424 (50%), Gaps = 28/424 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDA-LNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
LF + + +S+N M+R H+A L+L+ M SGL PD FTY + AC+ L
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLK-PDKFTYNFVFIACAKL 145
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ +G VH FK G + D + +SL+ MY G+ A+ +FD + E+ VSWN+MI
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+GY A++A+ ++ +M + G EPD T+VS+L AC L ++ GR + + K
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ + + ++ MY KCG + A + N+M + D V WT +I Y NG + A L M
Sbjct: 266 LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
GV P+ +++++LSACGS G+L GK + A L+ + V T L+DMY KC
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ +VF K A WNA+++ + H +EA+ LF +M V P + TF +L A
Sbjct: 386 EEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA- 441
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASI------------LVDIYSKCGSLGYAHHIF 476
+H L+ G Y E++S+ ++D+ S+ G L A
Sbjct: 442 ----------CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFM 491
Query: 477 NIIP 480
P
Sbjct: 492 ERFP 495
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 273/524 (52%), Gaps = 33/524 (6%)
Query: 117 TYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 176
+Y +I+A G +H +G T + L+ Y+ G+ A+ VFD M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 177 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 236
++ + MI RN +E+L + M G++ D V S+L A L + E G+
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
+H LV + + + + ++++DMY K G++ A + +++ E D+V + +I+GY N
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
A AL L + M L G+KP++++ +L+S +R + + I+E
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSH--------------MRNEEKVSEILEL 243
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
+D Y K W +++SG +HN +A FKQML + P
Sbjct: 244 MCLDGY-----------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
++AT +LLPA LA +K IH Y + +G V S L+D+Y KCG + A +F
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF 346
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
P Y HG + AV LF+QM +G + + +TFT++L ACSHAGL
Sbjct: 347 RKTP--KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGL 404
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
D G +LF M +++I+P ++HY C++DLLGRAG+L +AY +I+ M ++P+ VWGALL
Sbjct: 405 TDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
Query: 597 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWR 640
AC +H N+EL +AA+ ELEPEN+GN +LL +LYA G W
Sbjct: 465 AACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWE 508
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 209/410 (50%), Gaps = 39/410 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R + M+ + G ++L+ F EM GL L D F P ++KA +L
Sbjct: 73 VFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKL-DAFIVPSLLKASRNLL 131
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +H + K ++ D F+ +SL+ MY GE A+ VF + EQ +V +N MI+
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY N++A+EAL + M G++PD T +++ ++N E E+ L+ G+
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY-- 249
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ DVV+WT++I+G + N A + ML
Sbjct: 250 -----------------------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G+ PN ++ +LL AC + + +GK +H +++ LE V +AL+DMY KC +
Sbjct: 281 THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFIS 340
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA-- 427
+ +F KT KK T +N+++ + ++ L +A++LF QM + D+ TF ++L A
Sbjct: 341 EAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
Query: 428 YAVLADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHI 475
+A L DL Q + + L+++ + + RLE + +VD+ + G L A+ +
Sbjct: 401 HAGLTDLGQNLFL---LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
SW +++ V + A + F +M+ GL P++ T ++ AC+ L+++ G +HG
Sbjct: 255 SWTSIISGLVHNFQNEKAFDAFKQMLTHGL-YPNSATIITLLPACTTLAYMKHGKEIHGY 313
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEA 200
+ G + FV+++LL MY G +A ++F ++T V++N+MI Y + A++A
Sbjct: 314 SVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKA 373
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR----NA 256
+ ++++M G + D T ++L AC +LG+ + L++ K +V R
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNK---YRIVPRLEHYAC 430
Query: 257 MLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 289
M+D+ + G++ EA+ + M E D+ W L+
Sbjct: 431 MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALL 464
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 262/487 (53%), Gaps = 12/487 (2%)
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
WN + + E++ +Y M+ +G PD + +L +C L G+++H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD--VVTWTTLINGYILNGDARSA 301
+ G V A++ MY KCG + +A + E ++ V + LI+GY N A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
+ R M GV + V++ L+ C L G+ LH ++ L+SEV V + I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
Y KC ++F + K WNA++SG+ N L + ++L++QM V PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
S+L + A L K + + +GF+ + V++ + +Y++CG+L A +F+I+P+
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
YG HG GE+ + LF+ M++ G++P+ F VL ACSH+GL D+GL
Sbjct: 321 KSLVSWTAMIGC--YGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVS 601
LF+ M +++++ P +HY+C++DLLGRAG+L++A I +MP++P+ AVWGALLGAC
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 602 HENVELGEVAARWTFELEPENTGNYVLLANLYA----AVGRWRDAENVRDMVNVVGLRKL 657
H+NV++ E+A E EP N G YVL++N+Y+ G WR +R M+ RK
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWR----IRVMMRERAFRKK 494
Query: 658 PAQSLVE 664
P S VE
Sbjct: 495 PGYSYVE 501
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 197/408 (48%), Gaps = 14/408 (3%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
WN +R ++++L+ M+ SG + PD F++P I+K+C+ LS G +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD--LMKEQTVVSWNTMINGYFRNNRAEE 199
K G + + FV +L++MY G A+ VF+ Q V +N +I+GY N++ +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 259
A ++ RM + GV D T++ ++P C + + + LGR +H + G + V N+ +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 260 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 319
MY+KCG ++ L +EM ++TW +I+GY NG A L L M GV P+ +
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMK 377
+ S+LS+C G+ G + V V A I MYA+ CGNL + VF
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR--CGNLAKARAVFDI 317
Query: 378 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
K W A++ + + + + LF M+ + ++PD A F +L A + +
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 438 MNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIPL 481
+ + + R Y+LE S LVD+ + G L A +P+
Sbjct: 378 LELFRAMKRE---YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPV 422
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 13/363 (3%)
Query: 70 LFDTLPQRSLFS--WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+F+ PQ S S +N ++ Y + DA +F M +G+++ D+ T ++ C+
Sbjct: 110 VFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV-DSVTMLGLVPLCTV 168
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
+L +G +HG K G D + V NS + MYM G E + +FD M + +++WN +
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAV 228
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I+GY +N A + L +Y +M +GV PD T+VSVL +C L ++G EV LV+ GF
Sbjct: 229 ISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF 288
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
N+ V NA + MY +CG + +A + + M +V+WT +I Y ++G LML
Sbjct: 289 VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDD 348
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M+ G++P+ +LSAC G + G + A KLE + L+D+ +
Sbjct: 349 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR-- 406
Query: 367 CGNLSYKVFMKTS---KKRTAPWNALLSGF-IHNSLVREAIQLFKQMLVKDVQPDNATFN 422
G L + S + A W ALL IH ++ + K V + +P+N +
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK---VIEFEPNNIGYY 463
Query: 423 SLL 425
L+
Sbjct: 464 VLM 466
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 383 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 442
+ PWN L + SL E+I L++ ML PD +F +L + A L+ +HC
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 443 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 502
++ + G V + L+ +Y KCG + A +F P Y +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 503 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 562
A +F +M ++GV + +T ++ C+ + G SL +K + V
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNS 196
Query: 563 IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
I + + G + L MP+K W A++
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVI 229
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 283/540 (52%), Gaps = 10/540 (1%)
Query: 134 GVGVHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 192
G +HG + GF D SL+ MY G +A LVF E+ V +N +I+G+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG-GSERDVFGYNALISGFV 137
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
N +A+ Y M G+ PD T S+L ++ ++ ++VH L + GF +
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCY 196
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEM-DETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
V + ++ Y K +++A + +E+ D D V W L+NGY AL++ M E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
GV + ++ S+LSA G ++ G+ +H A++ S+++V ALIDMY K +
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEA 316
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
+F ++ WN++L + + LF++ML ++PD T ++LP L
Sbjct: 317 NSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 432 ADLKQAMNIHCYLIRSGFLYRLE----VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
A L+Q IH Y+I SG L R + + L+D+Y KCG L A +F+ +
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD--SMRVKDSA 434
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
YG GE+A+ +F+ M ++GV+P++ITF +L ACSH+G ++EG + M
Sbjct: 435 SWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+ I+P DHY C+ID+LGRA +L +AY L + PI N VW ++L +C H N +L
Sbjct: 495 ETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDL 554
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
VA + ELEPE+ G YVL++N+Y G++ + +VRD + ++K P S + +++
Sbjct: 555 ALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKN 614
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 197/370 (53%), Gaps = 7/370 (1%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
+R +F +N ++ +V G P DA+ + EM +G+ LPD +T+P ++K + D+
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGI-LPDKYTFPSLLKGSDAMELSDVK- 180
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ-TVVSWNTMINGYFRN 194
VHG+ FK GFD D +V + L+ Y E AQ VFD + ++ V WN ++NGY +
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 195 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 254
R E+AL V+++M + GV T+ SVL A + +++ GR +H L + G ++VV
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
NA++DMY K ++EA + MDE D+ TW +++ + GD L L ML G++
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL----ESEVIVETALIDMYAKCNCGNL 370
P++V++ ++L CG SL G+ +H + I L S + +L+DMY KC
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 371 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+ VF K +A WN +++G+ S A+ +F M V+PD TF LL A +
Sbjct: 421 ARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSH 480
Query: 431 LADLKQAMNI 440
L + N
Sbjct: 481 SGFLNEGRNF 490
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 144/273 (52%), Gaps = 6/273 (2%)
Query: 70 LFDTLPQRS-LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+FD LP R WN ++ Y Q+ R DAL +F +M G+ + + T ++ A +
Sbjct: 217 VFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRH-TITSVLSAFTVS 275
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+D G +HG+ K G D V N+L+ MY + E+A +F+ M E+ + +WN+++
Sbjct: 276 GDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL 335
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ + L ++ RM+ +G+ PD T+ +VLP CG L ++ GRE+H + G
Sbjct: 336 CVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLL 395
Query: 249 ----GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
N + N+++DMYVKCG +++A + + M D +W +INGY + AL +
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDM 455
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
M GVKP+ ++ LL AC G LN G+
Sbjct: 456 FSCMCRAGVKPDEITFVGLLQACSHSGFLNEGR 488
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 182/390 (46%), Gaps = 20/390 (5%)
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV-VRNAMLDMYVKCGQMKEAWWLAN 275
AT ++ L C K+ G+++H + KGF + ++++MY KCG M+ A L
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRA-VLVF 119
Query: 276 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
E DV + LI+G+++NG A+ R M G+ P+ + SLL + L+
Sbjct: 120 GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSD 178
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK-TSKKRTAPWNALLSGFI 394
K +H A + +S+ V + L+ Y+K + KVF + + + WNAL++G+
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+A+ +F +M + V T S+L A+ V D+ +IH +++G +
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
V++ L+D+Y K L A+ IF + Y G +A LF +M+
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA--LFERMLC 356
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML--------KQHQIIPLVDHYTCIIDL 566
SG++P+ +T T+VL C + +G + +M+ ++ I + ++D+
Sbjct: 357 SGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI-----HNSLMDM 411
Query: 567 LGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ G L DA + +M +K + A W ++
Sbjct: 412 YVKCGDLRDARMVFDSMRVK-DSASWNIMI 440
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/557 (30%), Positives = 276/557 (49%), Gaps = 38/557 (6%)
Query: 145 GFDLDTFVQNSLLAMYMNAGEK--EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 202
G LD F + L+A + + + + + ++ + SWN I G+ + +E+
Sbjct: 80 GLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL 139
Query: 203 VYNRMMDAGV---EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 259
+Y +M+ G PD T + C L+ LG + V + V NA +
Sbjct: 140 LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIH 199
Query: 260 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 319
M+ CG M+ A + +E D+V+W LINGY G+A A+ + ++M EGVKP+ V+
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC-------------- 365
+ L+S+C G LN GK + + L + + AL+DM++KC
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 366 ---------------NCG--NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
CG ++S K+F +K WNA++ G + ++A+ LF++
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M + +PD T L A + L L + IH Y+ + + + + LVD+Y+KCG+
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A +F+ I HG A+S FN+M+ +G+ P++ITF +L
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLAL--HGDASTAISYFNEMIDAGIAPDEITFIGLL 497
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 588
AC H G++ G F M + + P + HY+ ++DLLGRAG L +A L+ +MP++ +
Sbjct: 498 SACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEAD 557
Query: 589 HAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 648
AVWGALL C H NVELGE AA+ EL+P ++G YVLL +Y W DA+ R M
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRM 617
Query: 649 VNVVGLRKLPAQSLVEV 665
+N G+ K+P S +EV
Sbjct: 618 MNERGVEKIPGCSSIEV 634
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 223/441 (50%), Gaps = 40/441 (9%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL--TLPDNFTYPIIIKACSDLSFLDMGV 135
++FSWN +R + + P ++ L+ +M+ G + PD+FTYP++ K C+DL +G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 195
+ G K +L + V N+ + M+ + G+ E A+ VFD + +VSWN +INGY +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
AE+A+ VY M GV+PD T++ ++ +C +L ++ G+E + VKE G + + N
Sbjct: 237 EAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 256 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG------------------- 296
A++DM+ KCG + EA + + +++ +V+WTT+I+GY G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 297 ------------DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
+ AL L + M KP+ +++ LSAC G+L+ G +H +
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 345 RQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGFIHNSLVREA 402
+ L V + T+L+DMYAK CGN+S VF + + + A++ G + A
Sbjct: 417 KYSLSLNVALGTSLVDMYAK--CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY--RLEVASILV 460
I F +M+ + PD TF LL A + Q + ++S F +L+ SI+V
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSA-CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 461 DIYSKCGSLGYAHHIFNIIPL 481
D+ + G L A + +P+
Sbjct: 534 DLLGRAGLLEEADRLMESMPM 554
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 32/299 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD P R L SWN ++ Y ++G A+ ++ M G+ PD+ T ++ +CS L
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK-PDDVTMIGLVSSCSMLG 271
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G + + G + + N+L+ M+ G+ +A+ +FD ++++T+VSW TMI+
Sbjct: 272 DLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Query: 190 GYFR-------------------------------NNRAEEALRVYNRMMDAGVEPDCAT 218
GY R R ++AL ++ M + +PD T
Sbjct: 332 GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
++ L AC L +++G +H +++ N+ + +++DMY KCG + EA + + +
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+ +T+T +I G L+GDA +A+ M+ G+ P+ ++ LLSAC G + G+
Sbjct: 452 TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 117/231 (50%), Gaps = 5/231 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + ++ + WN M+ VQ R DAL LF EM S T PD T + ACS L
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLG 403
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
LD+G+ +H K L+ + SL+ MY G +A VF ++ + +++ +I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G + A A+ +N M+DAG+ PD T + +L AC ++ GR+ + +K + F
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNL 522
Query: 250 NMVVR--NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
N ++ + M+D+ + G ++EA L M E D W L+ G ++G+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 299/603 (49%), Gaps = 65/603 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD+ +S+ SWN+M+ Y P DA LF EM PD
Sbjct: 39 LFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM-------PDR-------------- 77
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ N L++ YM GE ++A+ VFDLM E+ VVSW ++
Sbjct: 78 -------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVK 118
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN--VELGREVHALVKEKGF 247
GY N + + A ++ +M P+ V + G L++ ++ +++ ++ +K
Sbjct: 119 GYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK-- 170
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ + R +M+ K G++ EA + +EM E V+TWTT++ GY N A + V
Sbjct: 171 --DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCN 366
M + VS S+L G + G+ A + + + VI A+I +
Sbjct: 229 M----PEKTEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ +VF ++ A W ++ N EA+ LF M + V+P T S+L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A LA L +H L+R F + VAS+L+ +Y KCG L + IF+ P
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP--SKDI 397
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFK 545
Y HG GE A+ +F +M SG +PN++TF + L ACS+AG+V+EGL +++
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
M + P+ HY C++D+LGRAG+ N+A +I +M ++P+ AVWG+LLGAC +H +
Sbjct: 458 SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
++ E A+ E+EPEN+G Y+LL+N+YA+ GRW D +R ++ +RK P S EV
Sbjct: 518 DVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Query: 666 RSE 668
++
Sbjct: 578 ENK 580
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 32/359 (8%)
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
N + + G++ EA L + D + +W +++ GY N R A R + E
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDA----RKLFDEMPD 76
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSYK 373
N++S L+S G + G+ A + + E V+ TAL+ Y +++
Sbjct: 77 RNIISWNGLVS-----GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
+F K +K W +L GF+ + + +A +L++ + K DN S++
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGR 187
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 493
+ +A I + + + +V Y + + A IF+++P
Sbjct: 188 VDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKIFDVMP--EKTEVSWTSML 241
Query: 494 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 553
Y ++G E A LF M V+P I +++ G + + +F M +++
Sbjct: 242 MGYVQNGRIEDAEELFEVM---PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 554 IPLVDHYTCIIDLLGRAG---QLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 609
+ +I + R G + D + L++ ++P ++L C S ++ G+
Sbjct: 298 -----SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 298/602 (49%), Gaps = 47/602 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL-----TLPDNFTYPIIIKA 124
+F++L Q + S+ ++ + + +A+ +F M G+ L + + +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 125 CSDLSFL---DMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 181
C LS + ++G +H + + GF D + NSLL +Y + A+L+F M E V
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
VSWN MI G+ + R+++++ RM D+G +P+ T +SVL AC
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC--------------- 360
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 301
+ G ++ + + + + V W +++GY A
Sbjct: 361 --------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
+ R M + +KP+ +++ +LS+C L GK +H IR ++ + + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 362 YAKCNCGNLSYKVFMKT-SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ-PDNA 419
Y++C +S +F ++ A WN+++SGF HN L +A+ LF++M V P+
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
+F ++L + + L L H +++SG++ V + L D+Y KCG + A F+ +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
YG +G G+ AV L+ +M+ SG +P+ ITF SVL ACSH+GLV+
Sbjct: 581 --LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 540 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 599
GL + M + H I P +DHY CI+D LGRAG+L DA L P K + +W LL +C
Sbjct: 639 GLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Query: 600 VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPA 659
H +V L A L+P+++ YVLL+N Y+++ +W D+ ++ ++N + K P
Sbjct: 699 RVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Query: 660 QS 661
QS
Sbjct: 759 QS 760
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 159/628 (25%), Positives = 276/628 (43%), Gaps = 95/628 (15%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R + SWN M+ + V+ G AL ++ M+ G LP FT ++ ACS +
Sbjct: 94 VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGF-LPSRFTLASVLSACSKVL 152
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQTVVSWNTMI 188
G+ HG+ K G D + FV N+LL+MY G + VF+ + + VS+ +I
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP------ACGLLKNV---ELGREVH 239
G R N+ EA++++ M + GV+ D + ++L C L + ELG+++H
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIH 272
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 299
L GF G++ + N++L++Y K M A + EM E +VV+W +I G+ +
Sbjct: 273 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 332
Query: 300 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
++ M G +PN V+ S+L AC G + G+
Sbjct: 333 KSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR---------------------- 370
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
++F + + WNA+LSG+ + EAI F+QM ++++PD
Sbjct: 371 -------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
T + +L + A L L+ IH +IR+ + S L+ +YS+C + + IF+
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC 477
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ-PNQITFTSVLHACSH----- 533
+ + + A+ LF +M Q+ V PN+ +F +VL +CS
Sbjct: 478 -INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLL 536
Query: 534 ------------------------------AGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
G +D F +L+++ +I + +
Sbjct: 537 HGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI-----WNEM 591
Query: 564 IDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELG-EV--AARWTFE 617
I G G+ ++A L R M KP+ + ++L AC VE G E+ + +
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 618 LEPENTGNYVLLANLYAAVGRWRDAENV 645
+EPE +Y+ + + GR DAE +
Sbjct: 652 IEPE-LDHYICIVDCLGRAGRLEDAEKL 678
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 190/457 (41%), Gaps = 78/457 (17%)
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK---------------- 177
G +HG + G DT++ N LL +Y+ G+ + A+ VFD M
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 178 ---------------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSV 222
E+ VVSWN MI+ R E+AL VY RM+ G P T+ SV
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 223 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE-AWWLANEMDETD 281
L AC + + G H + + G N+ V NA+L MY KCG + + + + + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 282 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS------ACGSFGSL-- 333
V++T +I G A+ + R+M +GV+ + V ++++LS C S +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 334 -NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSG 392
GK +H A+R ++ + +L+++YAK N + +F + + WN ++ G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 393 FIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR 452
F ++++ +M QP+ T S+L A C+
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA--------------CF--------- 361
Query: 453 LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM 512
+ G + IF+ IP Y + H E A+S F QM
Sbjct: 362 ------------RSGDVETGRRIFSSIP--QPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 513 VQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
++P++ T + +L +C+ ++ G + +++
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/654 (27%), Positives = 309/654 (47%), Gaps = 108/654 (16%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P R+ FSWNTM+ Y+ G +L F M P+
Sbjct: 84 LFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM-------PER-------------- 122
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
D + N +++ + AGE A+ +F+ M E+ VV+ N++++
Sbjct: 123 -------------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLH 163
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY N AEEALR++ + D T+ +VL AC L+ ++ G+++HA + G
Sbjct: 164 GYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC 220
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETD---------------------------- 281
+ + ++++++Y KCG ++ A ++ ++ E D
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKS 280
Query: 282 ---VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
V+ W ++I+GYI N AL+L M E + + ++A++++AC G L GK
Sbjct: 281 NRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQ 339
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKC-----------------------------NCGN 369
+H A + L +++V + L+DMY+KC +CG
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 370 L--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
+ + +VF + K WN++ +GF N E ++ F QM D+ D + +S++ A
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
A ++ L+ + G V+S L+D+Y KCG + + +F+ +
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD--TMVKSDEV 517
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y +G G A+ LF +M +G++P QITF VL AC++ GLV+EG LF+ M
Sbjct: 518 PWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESM 577
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
H +P +H++C++DLL RAG + +A NL+ MP + ++W ++L CV++ +
Sbjct: 578 KVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAM 637
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
G+ AA ELEPEN+ YV L+ ++A G W + VR ++ + K P S
Sbjct: 638 GKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 282/535 (52%), Gaps = 9/535 (1%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTMINGYFRN 194
VH GF+ + + +SL Y+ + + A F+ + ++ SWNT+++GY ++
Sbjct: 26 VHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKS 85
Query: 195 NRA--EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
+ L +YNRM D +V + AC L +E G +H L + G +
Sbjct: 86 KTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY 145
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
V ++++MY + G M+ A + +E+ + V W L+ GY+ L +M G
Sbjct: 146 VAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTG 205
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMYAKCNCGNLS 371
+ + +++ L+ ACG+ + GKC+H +IR+ ++ ++ ++IDMY KC + +
Sbjct: 206 LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNA 265
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
K+F + + W L+SGF EA LF+QML + + P+ T ++L + + L
Sbjct: 266 RKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
L+ ++H Y+IR+G + +D+Y++CG++ A +F+++P
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP--ERNVISWSS 383
Query: 492 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
+G +G E A+ F++M V PN +TF S+L ACSH+G V EG F+ M + +
Sbjct: 384 MINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDY 443
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL-GEV 610
++P +HY C++DLLGRAG++ +A + I MP+KP + WGALL AC H+ V+L GE+
Sbjct: 444 GVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEI 503
Query: 611 AARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
A + +EPE + YVLL+N+YA G W VR + + G RK QS EV
Sbjct: 504 AEK-LLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 218/417 (52%), Gaps = 7/417 (1%)
Query: 71 FDTLP--QRSLFSWNTMMRMYVQMGRP--HDALNLFVEMIHSGLTLPDNFTYPIIIKACS 126
F+ +P +R+ SWNT++ Y + D L L+ M D+F IKAC
Sbjct: 62 FNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRM-RRHCDGVDSFNLVFAIKACV 120
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
L L+ G+ +HG+ K G D D +V SL+ MY G E AQ VFD + + V W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
++ GY + ++ E R++ M D G+ D T++ ++ ACG + ++G+ VH + +
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 247 FWGNM-VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
F ++ +++DMYVKC + A L + +VV WTTLI+G+ A A L
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLF 300
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
R ML E + PN ++A++L +C S GSL +GK +H + IR +E + + T+ IDMYA+C
Sbjct: 301 RQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARC 360
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
++ VF ++ W+++++ F N L EA+ F +M ++V P++ TF SLL
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLL 420
Query: 426 PAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
A + ++K+ + R G + E + +VD+ + G +G A + +P+
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV 477
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 147/268 (54%), Gaps = 2/268 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R+ W +M+ Y++ + + LF M +GL L D T ++KAC ++
Sbjct: 166 VFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL-DALTLICLVKACGNVF 224
Query: 130 FLDMGVGVHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+G VHG++ + F D ++Q S++ MY+ + A+ +F+ ++ VV W T+I
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+G+ + RA EA ++ +M+ + P+ T+ ++L +C L ++ G+ VH + G
Sbjct: 285 SGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIE 344
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V + +DMY +CG ++ A + + M E +V++W+++IN + +NG AL M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYG 336
+ V PN V+ SLLSAC G++ G
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 168/377 (44%), Gaps = 15/377 (3%)
Query: 230 KNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD--ETDVVTWTT 287
K + ++VHA V GF +V+ +++ + Y++ ++ A N + + + +W T
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL-----LSACGSFGSLNYGKCLHAW 342
+++GY +++ ++L ++ + V S + AC G L G +H
Sbjct: 78 ILSGY---SKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 343 AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA 402
A++ L+ + V +L++MYA+ + KVF + + + W L+ G++ S E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE-VASILVD 461
+LF M + D T L+ A + K +H IR F+ + + + + ++D
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 521
+Y KC L A +F + K A LF QM++ + PNQ
Sbjct: 255 MYVKCRLLDNARKLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 581
T ++L +CS G + G S+ +M++ + V+ +T ID+ R G + A +
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN-FTSFIDMYARCGNIQMARTVFD 371
Query: 582 TMPIKPNHAVWGALLGA 598
MP + N W +++ A
Sbjct: 372 MMP-ERNVISWSSMINA 387
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 152/367 (41%), Gaps = 41/367 (11%)
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS-- 379
+LL+ +LN+ + +HA I E EV++ ++L + Y + N + + F +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 380 KKRTAPWNALLSGFIHNSLV--REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
K+ WN +LSG+ + + + L+ +M D+ + A L L+
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 438 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
+ IH +++G VA LV++Y++ G++ A +F+ IP+ Y
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV--RNSVLWGVLMKGYL 186
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH--AGLVDE---GLSLFKFMLKQHQ 552
K+ LF M +G+ + +T ++ AC + AG V + G+S+ + + Q
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 553 II--PLVDHY------------------------TCIIDLLGRAGQLNDAYNLIRTM--- 583
+ ++D Y T +I + + +A++L R M
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 584 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE-NTGNYVLLANLYAAVGRWRDA 642
I PN A+L +C S ++ G+ + E + N+ ++YA G + A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 643 ENVRDMV 649
V DM+
Sbjct: 367 RTVFDMM 373
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 267/502 (53%), Gaps = 34/502 (6%)
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
++ LR +++ +P +T +++ C + +E G++VH ++ GF +V+ N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 257 MLDMYVKCGQM-------------------------------KEAWWLANEMDETDVVTW 285
+L MY KCG + +EA L +EM E D +W
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 286 TTLINGYILNGDARSALMLCRVM-LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
T ++ GY+ AL+L +M + +PN+ +V+ ++A + + GK +H +
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 345 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 404
R L+S+ ++ ++L+DMY KC C + + +F K +K W +++ + +S RE
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 405 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
LF +++ +P+ TF +L A A L + +H Y+ R GF +S LVD+Y+
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 465 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 524
KCG++ A H+ + P ++G + A+ F+ +++SG +P+ +TF
Sbjct: 366 KCGNIESAKHVVDGCP--KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
+VL AC+HAGLV++GL F + ++H++ DHYTC++DLL R+G+ ++I MP
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
+KP+ +W ++LG C ++ N++L E AA+ F++EPEN YV +AN+YAA G+W +
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 543
Query: 645 VRDMVNVVGLRKLPAQSLVEVR 666
+R + +G+ K P S E++
Sbjct: 544 MRKRMQEIGVTKRPGSSWTEIK 565
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 193/370 (52%), Gaps = 19/370 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + ++ +SW M+ YV+ +P +AL L+ M + P+ FT I + A + +
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +HG +AG D D + +SL+ MY G ++A+ +FD + E+ VVSW +MI+
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
YF+++R E +++ ++ + P+ T VL AC L ELG++VH + GF
Sbjct: 293 RYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDP 352
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++++DMY KCG ++ A + + + D+V+WT+LI G NG AL ++L
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKC--- 365
G KP+ V+ ++LSAC G + G + ++ + +L T L+D+ A+
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 366 -NCGNLSYKVFMKTSKKRTAPWNALLSG---FIHNSLVREAIQ-LFKQMLVKDVQPDN-A 419
++ ++ MK SK W ++L G + + L EA Q LFK ++P+N
Sbjct: 473 EQLKSVISEMPMKPSK---FLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPV 523
Query: 420 TFNSLLPAYA 429
T+ ++ YA
Sbjct: 524 TYVTMANIYA 533
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 177/402 (44%), Gaps = 33/402 (8%)
Query: 113 PDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEK------ 166
P TY +I+ CS L+ G VH +GF + N LL MY G
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 167 -------------------------EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 201
E+A+ +FD M E+ SW M+ GY + ++ EEAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 202 RVYNRMMD-AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDM 260
+Y+ M P+ TV + A +K + G+E+H + G + V+ ++++DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 261 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 320
Y KCG + EA + +++ E DVV+WT++I+ Y + R L ++ +PN +
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 321 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 380
A +L+AC + GK +H + R + ++L+DMY KC + V K
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK 382
Query: 381 KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 440
W +L+ G N EA++ F +L +PD+ TF ++L A +++ +
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEF 442
Query: 441 HCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ L + + + LVD+ ++ G + + +P+
Sbjct: 443 FYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/606 (31%), Positives = 309/606 (50%), Gaps = 41/606 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +P+ S S+N M+ Y++ G A LF EM L ++ ++IK
Sbjct: 86 VFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV-----SWNVMIKG----Y 136
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G F+ + D N++L+ Y G + A+ VFD M E+ VSWN +++
Sbjct: 137 VRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS 196
Query: 190 GYFRNNRAEEALRVY-NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
Y +N++ EEA ++ +R A V +C G +K +V+ + F+
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALVSWNCLL-------GGFVKK-------KKIVEARQFF 242
Query: 249 GNMVVR-----NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+M VR N ++ Y + G++ EA L +E DV TWT +++GYI N A
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA-- 300
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCL-HAWAIRQKLESEVIVETALIDMY 362
R + + + N VS ++L+ + K L R V +I Y
Sbjct: 301 --RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-----VSTWNTMITGY 353
Query: 363 AKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
A+C + + +F K K+ W A+++G+ + EA++LF QM + + + ++F+
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
S L A + L+ +H L++ G+ V + L+ +Y KCGS+ A+ +F +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK--EMA 471
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
Y +HG GE+A+ F M + G++P+ T +VL ACSH GLVD+G
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 543 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
F M + + ++P HY C++DLLGRAG L DA+NL++ MP +P+ A+WG LLGA H
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 603 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSL 662
N EL E AA F +EPEN+G YVLL+NLYA+ GRW D +R + G++K+P S
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 663 VEVRSE 668
+E++++
Sbjct: 652 IEIQNK 657
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 208/477 (43%), Gaps = 66/477 (13%)
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN--VELG 235
+ + WN I+ Y R R EALRV+ RM P ++V G L+N EL
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELA 114
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
R++ + E+ ++V N M+ YV+ + +A L M E DV +W T+++GY N
Sbjct: 115 RKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQN 170
Query: 296 G---DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG----KCLHAWAI---- 344
G DARS + + N VS +LLSA + K WA+
Sbjct: 171 GCVDDARS-------VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN 223
Query: 345 ---------------RQKLES----EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP 385
RQ +S +V+ +I YA+ + + ++F ++ +
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 386 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 445
W A++SG+I N +V EA +LF +M + + ++N++L Y ++ A + +
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 446 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
+ + ++ Y++CG + A ++F+ +P Y + GH A
Sbjct: 340 ----CRNVSTWNTMITGYAQCGKISEAKNLFDKMP--KRDPVSWAAMIAGYSQSGHSFEA 393
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK-QHQIIPLVDHYTCII 564
+ LF QM + G + N+ +F+S L C+ ++ G L ++K ++ V + ++
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--ALL 451
Query: 565 DLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 621
+ + G + +A +L + M K + W ++ H GEVA R+ ++ E
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRH---GFGEVALRFFESMKRE 504
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 260/493 (52%), Gaps = 12/493 (2%)
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
+S N +I + + ++A+RV + P T ++ CG ++ VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 301
+ + G + + ++ MY G + A + ++ + + W L L G
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSAC-GSFGSLNY---GKCLHAWAIRQKLESEVIVETA 357
L L M GV+ + + +L AC S ++N+ GK +HA R+ S V + T
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML--VKDVQ 415
L+DMYA+ C + + VF + W+A+++ + N EA++ F++M+ KD
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
P++ T S+L A A LA L+Q IH Y++R G L V S LV +Y +CG L +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
F+ + YG HG+G+ A+ +F +M+ +G P +TF SVL ACSH G
Sbjct: 343 FD--RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 595
LV+EG LF+ M + H I P ++HY C++DLLGRA +L++A +++ M +P VWG+L
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 596 LGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLR 655
LG+C H NVEL E A+R F LEP+N GNYVLLA++YA W + + V+ ++ GL+
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 656 KLPAQSLVEVRSE 668
KLP + +EVR +
Sbjct: 521 KLPGRCWMEVRRK 533
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 184/367 (50%), Gaps = 7/367 (1%)
Query: 113 PDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 172
P TY ++I C S L + VH G D D F+ L+ MY + G + A+ V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 173 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC----GL 228
FD +++T+ WN + EE L +Y +M GVE D T VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
+ ++ G+E+HA + +G+ ++ + ++DMY + G + A ++ M +VV+W+ +
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 289 INGYILNGDARSALMLCRVMLLE--GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
I Y NG A AL R M+ E PN V++ S+L AC S +L GK +H + +R+
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
L+S + V +AL+ MY +C + +VF + + WN+L+S + + ++AIQ+F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSK 465
++ML P TF S+L A + +++ + + R G ++E + +VD+ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 466 CGSLGYA 472
L A
Sbjct: 435 ANRLDEA 441
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 31/380 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC---- 125
+FD +R+++ WN + R G + L L+ +M G+ D FTY ++KAC
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE-SDRFTYTYVLKACVASE 192
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN 185
++ L G +H + G+ ++ +L+ MY G + A VF M + VVSW+
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVE--PDCATVVSVLPACGLLKNVELGREVHALVK 243
MI Y +N +A EALR + MM + P+ T+VSVL AC L +E G+ +H +
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+G + V +A++ MY +CG+++ + + M + DVV+W +LI+ Y ++G + A+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQ 372
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEVIVETALIDMY 362
+ ML G P V+ S+L AC G + GK L R ++ ++ ++D+
Sbjct: 373 IFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLL 432
Query: 363 AKCNCGNLSYKVFMKTSKKRTAP----WNALL-SGFIHNSL---VREAIQLFKQMLVKDV 414
+ N + + K+ RT P W +LL S IH ++ R + +LF +
Sbjct: 433 GRANRLDEAAKMVQDM---RTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA------L 483
Query: 415 QPDNATFNSLLPAYAVLADL 434
+P NA Y +LAD+
Sbjct: 484 EPKNAG------NYVLLADI 497
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 259/473 (54%), Gaps = 7/473 (1%)
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
N R +EAL M G E ++L AC + + G+ VHA + + + +
Sbjct: 33 NGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYL 89
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
R +L Y KC +++A + +EM E +VV+WT +I+ Y G + AL + M+
Sbjct: 90 RTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG 149
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
KPN + A++L++C L GK +H ++ +S + V ++L+DMYAK + +
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEARE 209
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
+F ++ A+++G+ L EA+++F ++ + + P+ T+ SLL A + LA
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 493
L HC+++R + + + L+D+YSKCG+L YA +F+ +P
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP--ERTAISWNAML 327
Query: 494 XXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK-QH 551
Y KHG G + LF M + V+P+ +T +VL CSH + D GL++F M+ ++
Sbjct: 328 VGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEY 387
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 611
P +HY CI+D+LGRAG++++A+ I+ MP KP V G+LLGAC H +V++GE
Sbjct: 388 GTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESV 447
Query: 612 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
R E+EPEN GNYV+L+NLYA+ GRW D NVR M+ + K P +S ++
Sbjct: 448 GRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 171/311 (54%), Gaps = 5/311 (1%)
Query: 118 YPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 177
Y ++ AC D L G VH K + T+++ LL Y E A+ V D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
E+ VVSW MI+ Y + + EAL V+ MM + +P+ T +VL +C + LG++
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
+H L+ + + ++ V +++LDMY K GQ+KEA + + E DVV+ T +I GY G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
AL + + EG+ PN V+ ASLL+A L++GK H +R++L +++ +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 358 LIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDV 414
LIDMY+K CGNLSY ++F ++ WNA+L G+ + L RE ++LF+ M K V
Sbjct: 295 LIDMYSK--CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 415 QPDNATFNSLL 425
+PD T ++L
Sbjct: 353 KPDAVTLLAVL 363
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 147/259 (56%), Gaps = 2/259 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ D +P++++ SW M+ Y Q G +AL +F EM+ S P+ FT+ ++ +C S
Sbjct: 109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD-GKPNEFTFATVLTSCIRAS 167
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G +HG+ K +D FV +SLL MY AG+ ++A+ +F+ + E+ VVS +I
Sbjct: 168 GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIA 227
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + EEAL +++R+ G+ P+ T S+L A L ++ G++ H V +
Sbjct: 228 GYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
V++N+++DMY KCG + A L + M E ++W ++ GY +G R L L R+M
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 310 LEG-VKPNLVSVASLLSAC 327
E VKP+ V++ ++LS C
Sbjct: 348 DEKRVKPDAVTLLAVLSGC 366
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 180/601 (29%), Positives = 295/601 (49%), Gaps = 51/601 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF +P+++ S+ TM+ +V+ GR +A L+ E + + D+ +++
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE---TPVKFRDSVASNVLLSG----- 186
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQ-NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+L G + G + V +S++ Y G A+ +FD M E+ V++W MI
Sbjct: 187 YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMI 246
Query: 189 NGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+GYF+ E+ ++ RM G V+ + T+ + AC G ++H LV
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++ + N+++ MY K G M EA + M D V+W +LI G + A L
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M ++VS ++ G ++ KC+
Sbjct: 367 M----PGKDMVSWTDMIKGFSGKGEIS--KCV---------------------------- 392
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
++F +K W A++S F+ N EA+ F +ML K+V P++ TF+S+L A
Sbjct: 393 -----ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
A LADL + + IH +++ + L V + LV +Y KCG+ A+ IF+ I
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS--EPNIV 505
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y +G G+ A+ LF+ + SG +PN +TF ++L AC H G VD G FK M
Sbjct: 506 SYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+ I P DHY C++DLLGR+G L+DA NLI TMP KP+ VWG+LL A +H V+L
Sbjct: 566 KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDL 625
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
E+AA+ ELEP++ YV+L+ LY+ +G+ RD + + ++ ++K P S + ++
Sbjct: 626 AELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Query: 668 E 668
E
Sbjct: 686 E 686
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 183/458 (39%), Gaps = 98/458 (21%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 210
F NS ++ + G ++A+ +F M +++VSW MI+ Y N + +A +V++ M
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM--- 107
Query: 211 GVEPDCATVVSVLPACGLLKN-VELGR--EVHALVKEKGFWGNMVVRNAMLDMYVKCGQM 267
P T ++KN +LG+ E+ + EK N V M+ +V+ G+
Sbjct: 108 ---PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRF 160
Query: 268 KEAWWLANE--MDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS 325
EA +L E + D V L++GY+ G A+ + + M ++ V VS +S++
Sbjct: 161 DEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV----VSCSSMVH 216
Query: 326 ACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP 385
G G+ + A ++ F + +++
Sbjct: 217 -----GYCKMGRIVDARSL------------------------------FDRMTERNVIT 241
Query: 386 WNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
W A++ G+ + LF +M + DV+ ++ T + A ++ IH +
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 445 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 504
R + L + + L+ +YSK G +G A +F ++ +
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM---------------------KNKD 340
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
+VS +N ++ VQ QI+ E LF+ M + + +T +I
Sbjct: 341 SVS-WNSLITGLVQRKQIS---------------EAYELFEKMPGKDMV-----SWTDMI 379
Query: 565 DLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
G+++ L MP K N W A++ A VS+
Sbjct: 380 KGFSGKGEISKCVELFGMMPEKDN-ITWTAMISAFVSN 416
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 251/450 (55%), Gaps = 4/450 (0%)
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 276
A V S++ A ++EL R +H V + + + + + ++ Y++ G A L +E
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 277 MDETDVVTWTTLINGYILNGD-ARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLN 334
M E D+V+W +LI+GY G + +L R+M+ E G +PN V+ S++SAC GS
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 394
G+C+H ++ + EV V A I+ Y K S K+F S K WN ++ +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
N L + + F +PD ATF ++L + + ++ A IH ++ GF
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
+ + L+D+YSK G L + +F+ I Y HG G A+ F MV
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEIT--SPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
G+ P+ +TFT +L+ACSH+GLV+EG F+ M K+++I P +DHY+C++DLLGR+G L
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 575 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 634
DAY LI+ MP++P+ VWGALLGAC +++ +LG AA FELEP + NYV+L+N+Y+
Sbjct: 390 DAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYS 449
Query: 635 AVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
A G W+DA +R+++ GL + S +E
Sbjct: 450 ASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDL 128
LFD +P+R L SWN+++ Y G + M+ S + P+ T+ +I AC
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ G +HG+ K G + V N+ + Y G+ + +F+ + + +VSWNTMI
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ +N AE+ L +N G EPD AT ++VL +C + V L + +H L+ GF
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
GN + A+LD+Y K G+++++ + +E+ D + WT ++ Y +G R A+ +M
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+ G+ P+ V+ LL+AC G + GK + R +++ + + ++D+ +
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 387
Query: 368 GNLSYKVFMKTS-KKRTAPWNALL 390
+Y + + + + W ALL
Sbjct: 388 LQDAYGLIKEMPMEPSSGVWGALL 411
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 163/345 (47%), Gaps = 25/345 (7%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM-- 208
F+ + L+ Y+ G A+ +FD M E+ +VSWN++I+GY + V +RMM
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 209 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 268
+ G P+ T +S++ AC + E GR +H LV + G + V NA ++ Y K G +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 328
+ L ++ ++V+W T+I ++ NG A L + G +P+ + ++L +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 329 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
G + + +H + + TAL+D+Y+K S VF + + + W A
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
+L+ + + R+AI+ F+ M+ + PD+ TF LL A + H L+ G
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS-----------HSGLVEEG 355
Query: 449 FLY------------RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
Y RL+ S +VD+ + G L A+ + +P+
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPM 400
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 255/450 (56%), Gaps = 2/450 (0%)
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
V +L C V + H + G++ + N +++ Y KCG ++ A + + M
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
E +V+W T+I Y N AL + M EG K + +++S+LSACG K
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
LH +++ ++ + V TAL+D+YAKC + +VF K + W+++++G++ N
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 458
EA+ L+++ ++ + T +S++ A + LA L + +H + +SGF + VAS
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 459 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ 518
VD+Y+KCGSL ++ IF+ + + KH + + LF +M Q G+
Sbjct: 304 AVDMYAKCGSLRESYIIFS--EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 519 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 578
PN++TF+S+L C H GLV+EG FK M + + P V HY+C++D+LGRAG L++AY
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 579 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGR 638
LI+++P P ++WG+LL +C ++N+EL EVAA FELEPEN GN+VLL+N+YAA +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 639 WRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
W + R ++ ++K+ +S ++++ +
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 186/363 (51%), Gaps = 3/363 (0%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 180
I++ C+ + HG + + D + N L+ Y G E A+ VFD M E++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 240
+VSWNTMI Y RN EAL ++ M + G + T+ SVL ACG+ + +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
L + N+ V A+LD+Y KCG +K+A + M + VTW++++ GY+ N +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
AL+L R ++ N +++S++ AC + +L GK +HA + S V V ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
MYAKC SY +F + +K WN ++SGF ++ +E + LF++M + P+ T
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNI 478
F+SLL +++ L+R+ + V S +VDI + G L A+ +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 479 IPL 481
IP
Sbjct: 426 IPF 428
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 200/360 (55%), Gaps = 9/360 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 128
+FD + +RSL SWNTM+ +Y + +AL++F+EM + G + FT ++ AC +
Sbjct: 118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE-FTISSVLSACGVNC 176
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L+ +H ++ K DL+ +V +LL +Y G + A VF+ M++++ V+W++M+
Sbjct: 177 DALECK-KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY +N EEAL +Y R +E + T+ SV+ AC L + G+++HA++ + GF
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N+ V ++ +DMY KCG ++E++ + +E+ E ++ W T+I+G+ + + ++L M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+G+ PN V+ +SLLS CG G + G + L V+ + ++D+ +
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 368 GNLSYKVFMKTSKKRTAP-WNALL-SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ +Y++ TA W +LL S ++ +L E ++ + L +++P+NA + LL
Sbjct: 416 LSEAYELIKSIPFDPTASIWGSLLASCRVYKNL--ELAEVAAEKLF-ELEPENAGNHVLL 472
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/639 (28%), Positives = 296/639 (46%), Gaps = 104/639 (16%)
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE------------ 178
L + VHG GF + N L+ +Y + E A+ +FD + E
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 179 ---------------------QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 217
+ V +N MI G+ NN A+ ++ +M G +PD
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 218 TVVSVLPACGLLKNVELG-REVHALVKEKGFWGNMVVRNAMLDMYVKCGQ----MKEAWW 272
T SVL L+ + E + HA + G V NA++ +Y KC + A
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 273 LANEMDETDVVTWTTLINGYILNGD--------------------------------ARS 300
+ +E+ E D +WTT++ GY+ NG +
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
AL + R M+ G++ + + S++ AC + G L GK +HA+ +R++ + + +L+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVS 328
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV------ 414
+Y KC + + +F K K WNALLSG++ + + EA +FK+M K++
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 415 -------------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
+P + F+ + + AVL H L++ GF
Sbjct: 389 ISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF 448
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 509
L + L+ +Y+KCG + A +F +P G+HGHG AV ++
Sbjct: 449 DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL--GQHGHGAEAVDVY 506
Query: 510 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 569
+M++ G++P++IT +VL ACSHAGLVD+G F M ++I P DHY +IDLL R
Sbjct: 507 EEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCR 566
Query: 570 AGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLL 629
+G+ +DA ++I ++P KP +W ALL C H N+ELG +AA F L PE+ G Y+LL
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLL 626
Query: 630 ANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+N++AA G+W + VR ++ G++K A S +E+ ++
Sbjct: 627 SNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQ 665
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 205/485 (42%), Gaps = 77/485 (15%)
Query: 70 LFDTLP--QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+F+ P R +N M+ + + A+NLF +M H G PDNFT+ ++ +
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK-PDNFTFASVLAGLAL 160
Query: 128 LSFLD-MGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEK----EQAQLVFDLMKEQTVV 182
++ + V H K+G T V N+L+++Y A+ VFD + E+
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDER 220
Query: 183 SWNTMINGYFRN------------------------------NRA--EEALRVYNRMMDA 210
SW TM+ GY +N NR +EAL + RM+ +
Sbjct: 221 SWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS 280
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVK--------------------------- 243
G+E D T SV+ AC ++LG++VHA V
Sbjct: 281 GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEAR 340
Query: 244 ---EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
EK ++V NA+L YV G + EA + EM E ++++W +I+G NG
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
L L M EG +P + + + +C G+ G+ HA ++ +S + ALI
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
MYAKC + +VF + WNAL++ + EA+ ++++ML K ++PD T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 476
++L A + + Q Y +YR+ + L+D+ + G A +
Sbjct: 521 LLTVLTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 477 NIIPL 481
+P
Sbjct: 578 ESLPF 582
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 52/350 (14%)
Query: 299 RSALMLCRV----MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIV 354
R++L L R ++ G +P + L+ LNY + L + E + I
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL----FDEISEPDKIA 82
Query: 355 ETALIDMYAKCNCGNLSYKVFMKTS--KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
T ++ Y L+ VF K + T +NA+++GF HN+ AI LF +M +
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 413 DVQPDNATFNSLLPAYAVLA-DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS--- 468
+PDN TF S+L A++A D KQ + H ++SG Y V++ LV +YSKC S
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 469 -LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM----------------------- 504
L A +F+ I Y K+G+ ++
Sbjct: 203 LLHSARKVFDEI--LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 505 ---------AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
A+ + +MV SG++ ++ T+ SV+ AC+ AGL+ G + ++L++
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 556 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
D+ ++ L + G+ ++A + MP K + W ALL VS ++
Sbjct: 321 HFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHI 367
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 282/552 (51%), Gaps = 6/552 (1%)
Query: 121 IIKACSDLSFLDMGVGVHG---MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 177
++K C++ S+L +G +H +T ++ D + NSL+ +Y+ E +A+ +FDLM
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGR 236
E+ VVSW M+ GY + E L+++ M +G P+ V +C +E G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
+ H + G + VRN ++ MY C EA + +++ D+ +++ ++GY+ G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
+ L + R E N ++ S L + LN +H+ +R +EV
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
ALI+MY KC + +VF T + ++ + + EA+ LF +M K+V P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+ TF LL + A L+ LKQ +H +++SG+ + V + LV++Y+K GS+ A F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ + + HG G A+ F++M+ +G PN+ITF VL ACSH G
Sbjct: 397 SGMTFRDIVTWNTMISGCSH--HGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
V++GL F ++K+ + P + HYTCI+ LL +AG DA + +RT PI+ + W LL
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 597 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
AC N LG+ A + E P ++G YVLL+N++A W VR ++N G++K
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 657 LPAQSLVEVRSE 668
P S + +R++
Sbjct: 575 EPGVSWIGIRNQ 586
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 197/414 (47%), Gaps = 3/414 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R++ SW MM+ Y G + L LF M SG + P+ F ++ K+CS+
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
++ G HG K G FV+N+L+ MY +A V D + + +++ ++
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY +E L V + + + T +S L L+++ L +VH+ + GF
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ A+++MY KCG++ A + ++ ++ TT+++ Y + AL L M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+ V PN + A LL++ L G LH ++ + V+V AL++MYAK
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ K F + + WN ++SG H+ L REA++ F +M+ P+ TF +L A +
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNIIPL 481
+ ++Q ++ L++ F + ++ + +V + SK G A P+
Sbjct: 451 HIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 296/599 (49%), Gaps = 64/599 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
FD+L +++ SWN+++ Y G P +A LF EM +
Sbjct: 39 FFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV------------------- 79
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
V +G+ + +++N ++ +A+ VF+LM E+ VVSW M+
Sbjct: 80 -----VSWNGL-------VSGYIKNRMIV---------EARNVFELMPERNVVSWTAMVK 118
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN--VELGREVHALVKEKGF 247
GY + EA ++ RM P+ V + GL+ + ++ R+++ ++ K
Sbjct: 119 GYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-- 170
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++V M+ + G++ EA + +EM E +VVTWTT+I GY N A L V
Sbjct: 171 --DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCN 366
M + VS S+L G G+ A + + VI A+I + +
Sbjct: 229 M----PEKTEVSWTSML-----LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ + +VF + A W ++ + EA+ LF QM + V+P + S+L
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A LA L+ +H +L+R F + VAS+L+ +Y KCG L A +F+
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD--RFSSKDI 397
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
Y HG GE A+ +F++M SG PN++T ++L ACS+AG ++EGL +F+
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
M + + P V+HY+C +D+LGRAGQ++ A LI +M IKP+ VWGALLGAC +H ++
Sbjct: 458 MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
L EVAA+ FE EP+N G YVLL+++ A+ +W D VR + + K P S +EV
Sbjct: 518 LAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/603 (29%), Positives = 285/603 (47%), Gaps = 40/603 (6%)
Query: 99 LNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLA 158
L++F ++ S +T + Y I D +H + G + Q L
Sbjct: 15 LSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFV 74
Query: 159 MYMN--AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 216
+ + G A +F + E VV WN MI G+ + + E +R+Y M+ GV PD
Sbjct: 75 FWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDS 134
Query: 217 ATVVSVLPACGLLKN---VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 273
T +L GL ++ + G+++H V + G N+ V+NA++ MY CG M A +
Sbjct: 135 HTFPFLLN--GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 274 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 333
+ + DV +W +I+GY + ++ L M V P V++ +LSAC
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 393
+ K +H + K E + +E AL++ YA C +++ ++F + W +++ G+
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 394 IHNSLVREAIQLFKQMLVKD-------------------------------VQPDNATFN 422
+ ++ A F QM V+D + PD T
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
S+L A A L L+ I Y+ ++ + V + L+D+Y KCG A +F+ +
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH--DMD 430
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
+G G+ A+ +F QM +QP+ IT+ VL AC+H+G+VD+
Sbjct: 431 QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARK 490
Query: 543 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
F M H+I P + HY C++D+LGRAG + +AY ++R MP+ PN VWGALLGA H
Sbjct: 491 FFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
Query: 603 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSL 662
+ + E+AA+ ELEP+N Y LL N+YA RW+D VR + V ++K P SL
Sbjct: 551 NDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Query: 663 VEV 665
+EV
Sbjct: 611 IEV 613
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 225/448 (50%), Gaps = 40/448 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 128
LF +P+ + WN M++ + ++ + + L++ M+ G+T PD+ T+P ++ D
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT-PDSHTFPFLLNGLKRDG 148
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L G +H K G + +VQN+L+ MY G + A+ VFD ++ V SWN MI
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+GY R EE++ + M V P T++ VL AC +K+ +L + VH V E
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD---ARS----- 300
++ + NA+++ Y CG+M A + M DV++WT+++ GY+ G+ AR+
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 301 -----------------------ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+L + R M G+ P+ ++ S+L+AC GSL G+
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 397
+ + + K++++V+V ALIDMY KC C + KVF ++ W A++ G +N
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 457
+EAI++F QM +QPD+ T+ +L A + QA + RS +R+E +
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM-RSD--HRIEPSL 505
Query: 458 I----LVDIYSKCGSLGYAHHIFNIIPL 481
+ +VD+ + G + A+ I +P+
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPM 533
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD +P R SW M+ Y++ G +++L +F EM +G+ +PD FT ++ AC+ L
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM-IPDEFTMVSVLTACAHLGS 383
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
L++G + K D V N+L+ MY G E+AQ VF M ++ +W M+ G
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGFWG 249
N + +EA++V+ +M D ++PD T + VL AC V+ R+ A ++ +
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEP 503
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 308
++V M+DM + G +KEA+ + +M + + W L+ L+ D A + + +
Sbjct: 504 SLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKI 563
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
L ++P+ +V +LL C + K L +R+K+ I +T
Sbjct: 564 L--ELEPDNGAVYALL--CNIYAGCKRWKDLR--EVRRKIVDVAIKKT 605
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 265/513 (51%), Gaps = 24/513 (4%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+HG K G D D F + LLA + + + A +F+ + + +NTMI GY ++
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
E A V+N++ G+ D + ++ L +C V +G +H + GF +RNA
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 257 MLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
++ Y CG++ +A + +EM ++ D VT++TL+NGY+ AL L R+M V
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
N+ ++ S LSA G L+ + H I+ L+ ++ + TALI MY K + + ++F
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 376 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA------ 429
+K WN ++ + L+ E + L +QM + ++P+++TF LL + A
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF 345
Query: 430 ---VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
+ADL + I I + + LVD+Y+K G L A IFN +
Sbjct: 346 VGRTVADLLEEERIALDAI---------LGTALVDMYAKVGLLEKAVEIFN--RMKDKDV 394
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSG--VQPNQITFTSVLHACSHAGLVDEGLSLF 544
YG HG AV+LFN+M + V+PN+ITF VL+ACSH GLV EG+ F
Sbjct: 395 KSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCF 454
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 604
K M++ + P V+HY C++DLLGRAGQL +AY LIR +PI + W ALL AC + N
Sbjct: 455 KRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN 514
Query: 605 VELGEVAARWTFELEPENTGNYVLLANLYAAVG 637
+LGE E+ + + +LLA +A G
Sbjct: 515 ADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 215/416 (51%), Gaps = 5/416 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ + +LF +NTM+R Y P A ++F ++ GLTL D F++ +K+CS
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTL-DRFSFITTLKSCSREL 139
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT-VVSWNTMI 188
+ +G G+HG+ ++GF + T ++N+L+ Y G+ A+ VFD M + V+++T++
Sbjct: 140 CVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLM 199
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
NGY + ++ AL ++ M + V + +T++S L A L ++ H L + G
Sbjct: 200 NGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLD 259
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++ + A++ MY K G + A + + DVVTW +I+ Y G + L R M
Sbjct: 260 LDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQM 319
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
E +KPN + LLS+C + G+ + +++ + I+ TAL+DMYAK
Sbjct: 320 KYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLL 379
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--VQPDNATFNSLLP 426
+ ++F + K W A++SG+ + L REA+ LF +M ++ V+P+ TF +L
Sbjct: 380 EKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 427 AYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
A + + + + ++ + F ++E +VD+ + G L A+ + +P+
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 268/514 (52%), Gaps = 7/514 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMG--RPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+FD +++SWN ++R V G R D L+ F EM G+ L + ++ + K+ +
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDL-NVYSLSNVFKSFAG 226
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
S L G+ H + K G F++ SL+ MY G+ A+ VFD + E+ +V W M
Sbjct: 227 ASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAM 286
Query: 188 INGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEK 245
I G N R EAL ++ M+ + + P+ + ++LP G +K ++LG+EVHA ++K K
Sbjct: 287 IAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK 346
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
+ V + ++D+Y KCG M + + + ++WT L++GY NG AL
Sbjct: 347 NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSI 406
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
M EG +P++V++A++L C ++ GK +H +A++ V + T+L+ MY+KC
Sbjct: 407 VWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKC 466
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
++F + ++ W A++ ++ N +R I++F+ ML+ +PD+ T +L
Sbjct: 467 GVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
+ L LK +H ++++ F V++ ++ +Y KCG L A+ F+ + +
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAV--KG 584
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
YG + A++ F QMV G PN TFT+VL CS AG VDE F
Sbjct: 585 SLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 579
ML+ + + P +HY+ +I+LL R G++ +A L
Sbjct: 645 LMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 232/489 (47%), Gaps = 14/489 (2%)
Query: 117 TYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 176
T+ +++AC L G VH G + + F++ L+ MY G + AQ VFD
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 177 KEQTVVSWNTMINGYF--RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 234
V SWN ++ G R ++ L + M + GV+ + ++ +V + +
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 235 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 294
G + HAL + G + ++ ++ +++DMY KCG++ A + +E+ E D+V W +I G
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 295 NGDARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK-LESEV 352
N AL L R M+ E + PN V + ++L G +L GK +HA ++ K +
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 353 IVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 410
V + LID+Y C CG+++ +VF + ++ W AL+SG+ N +A++ M
Sbjct: 353 FVHSGLIDLY--CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ 410
Query: 411 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 470
+ +PD T ++LP A L +KQ IHCY +++ FL + + + L+ +YSKCG
Sbjct: 411 QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE 470
Query: 471 YAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA 530
Y +F+ L Y ++ + +F M+ S +P+ +T VL
Sbjct: 471 YPIRLFD--RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 531 CSHAGLVDEGLSLFKFMLKQH-QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH 589
CS + G L +LK+ + IP V II + G+ G L A + +K
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSAR--IIKMYGKCGDLRSANFSFDAVAVK-GS 585
Query: 590 AVWGALLGA 598
W A++ A
Sbjct: 586 LTWTAIIEA 594
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 203/425 (47%), Gaps = 8/425 (1%)
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I + R N E AL + + + G+ + T ++L AC K++ G++VH ++ G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
N +R ++ MY CG +K+A + +E ++V +W L+ G +++G R +L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 308 MLLE--GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
+ GV N+ S++++ + +L G HA AI+ L + V ++T+L+DMY KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSL 424
L+ +VF + ++ W A+++G HN EA+ LF+ M+ ++ + P++ ++
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 425 LPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
LP + LK +H ++++S ++ + V S L+D+Y KCG + +F
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQ 380
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
Y +G + A+ M Q G +P+ +T +VL C+ + +G +
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Query: 544 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHE 603
+ LK + +P V T ++ + + G L + + N W A++ V +
Sbjct: 441 HCYALK-NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR-NVKAWTAMIDCYVENC 498
Query: 604 NVELG 608
++ G
Sbjct: 499 DLRAG 503
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 226/389 (58%), Gaps = 8/389 (2%)
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCL 339
+V W TLI GY G++ SA L R M + G V+P+ + L+ A + + G+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 340 HAWAIRQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGFIHNS 397
H+ IR S + V+ +L+ +YA NCG+++ YKVF K +K WN++++GF N
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG 201
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 457
EA+ L+ +M K ++PD T SLL A A + L +H Y+I+ G L ++
Sbjct: 202 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS-G 516
+L+D+Y++CG + A +F+ + +G G+ A+ LF M + G
Sbjct: 262 VLLDLYARCGRVEEAKTLFD--EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 517 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA 576
+ P +ITF +L+ACSH G+V EG F+ M ++++I P ++H+ C++DLL RAGQ+ A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 577 YNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAV 636
Y I++MP++PN +W LLGAC H + +L E A +LEP ++G+YVLL+N+YA+
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 439
Query: 637 GRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
RW D + +R + G++K+P SLVEV
Sbjct: 440 QRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 158/260 (60%), Gaps = 1/260 (0%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
++F WNT++R Y ++G A +L+ EM SGL PD TYP +IKA + ++ + +G +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
H + ++GF +VQNSLL +Y N G+ A VFD M E+ +V+WN++ING+ N +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 257
EEAL +Y M G++PD T+VS+L AC + + LG+ VH + + G N+ N +
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 258 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLEGVKPN 316
LD+Y +CG+++EA L +EM + + V+WT+LI G +NG + A+ L + M EG+ P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 317 LVSVASLLSACGSFGSLNYG 336
++ +L AC G + G
Sbjct: 324 EITFVGILYACSHCGMVKEG 343
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 24/327 (7%)
Query: 169 AQLVFD-LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPAC 226
A VF + K V WNT+I GY + A +Y M +G VEPD T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 227 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 286
+ +V LG +H++V GF + V+N++L +Y CG + A+ + ++M E D+V W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
++ING+ NG AL L M +G+KP+ ++ SLLSAC G+L GK +H + I+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
L + L+D+YA+C + +F + K + W +L+ G N +EAI+LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLE 454
K M + LLP + A + HC +++ GF Y R+E
Sbjct: 312 KYM---------ESTEGLLPCEITFVGILYACS-HCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPL 481
+VD+ ++ G + A+ +P+
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPM 388
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 131/250 (52%), Gaps = 6/250 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P++ L +WN+++ + + G+P +AL L+ EM G+ PD FT ++ AC+ +
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK-PDGFTIVSLLSACAKIG 236
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G VH K G + N LL +Y G E+A+ +FD M ++ VSW ++I
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 190 GYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GF 247
G N +EA+ ++ M G+ P T V +L AC V+ G E ++E+
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCR 306
+ M+D+ + GQ+K+A+ M + +VV W TL+ ++GD+ A R
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA-EFAR 415
Query: 307 VMLLEGVKPN 316
+ +L+ ++PN
Sbjct: 416 IQILQ-LEPN 424
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 269/516 (52%), Gaps = 14/516 (2%)
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR---- 193
HG K G F+QN LL Y E + A +FD M + +V+WN +I+G +
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 194 -NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
N+RA +R++ V D + + ++ C N++ G ++H L+ ++G +
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF 178
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
+++ Y KCG + EA + + + D+V W L++ Y+LNG A L ++M +
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 313 --VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
+ + + +SLLSAC + GK +HA + + ++ V TAL++MYAK N +
Sbjct: 239 NRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 371 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+ + F + WNA++ GF N REA++LF QML++++QPD TF S+L + A
Sbjct: 295 ARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAK 354
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
+ + + + + + G L VA+ L+ YS+ G+L A F+ I
Sbjct: 355 FSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI--REPDLVSWT 412
Query: 491 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 550
HG E ++ +F M+Q +QP++ITF VL ACSH GLV EGL FK M +
Sbjct: 413 SVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Query: 551 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 610
++I +HYTC+IDLLGRAG +++A +++ +MP +P+ A G C HE E +
Sbjct: 472 YKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKW 531
Query: 611 AARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 646
A+ E+EP NY +L+N Y + G W A +R
Sbjct: 532 GAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 211/424 (49%), Gaps = 24/424 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMG-----RPHDALNLFVEMIHSGLTLPDNFTYPIIIKA 124
LFD +P R++ +WN ++ +Q R H ++ + ++L D+ ++ +I+
Sbjct: 93 LFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL-DHVSFMGLIRL 151
Query: 125 CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 184
C+D + + G+ +H + K G + F SL+ Y G +A+ VF+ + ++ +V W
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLPACGLLKNVELGREVHALV 242
N +++ Y N +EA + M D T S+L AC +E G+++HA++
Sbjct: 212 NALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAIL 267
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 302
+ + ++ V A+L+MY K + +A M +VV+W +I G+ NG+ R A+
Sbjct: 268 FKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAM 327
Query: 303 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY 362
L MLLE ++P+ ++ AS+LS+C F ++ K + A ++ + V +LI Y
Sbjct: 328 RLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSY 387
Query: 363 AKCNCGNLSYKV--FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
++ GNLS + F + W +++ + E++Q+F+ ML K +QPD T
Sbjct: 388 SR--NGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKIT 444
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 476
F +L A + +++ + C+ + F Y++E + L+D+ + G + A +
Sbjct: 445 FLEVLSACSHGGLVQEGL--RCFKRMTEF-YKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 477 NIIP 480
N +P
Sbjct: 502 NSMP 505
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 252/494 (51%), Gaps = 12/494 (2%)
Query: 172 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGV-EPDCATVVSVLPACGLLK 230
VF+ + WN +I GY E + + RMM G+ PD T V+ C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
V +G VH LV GF ++VV + +D Y KC + A + EM E + V+WT L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 350
Y+ +G+ A + +M + NL S +L+ G L K L + +
Sbjct: 185 AYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKL----FDEMPKR 236
Query: 351 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 410
++I T++ID YAK + +F + W+AL+ G+ N EA ++F +M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 411 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSL 469
K+V+PD L+ A + + + + YL R V L+D+ +KCG +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 470 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
A +F +P HG G A+ LF +MV G+ P+++ FT +L
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAI--HGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH 589
C + LV+EGL F+ M K++ I+ DHY+CI++LL R G+L +AY LI++MP + +
Sbjct: 415 VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 590 AVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMV 649
+ WG+LLG C H N E+ EV AR FELEP++ G+YVLL+N+YAA+ RW D ++RD +
Sbjct: 475 SAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKM 534
Query: 650 NVVGLRKLPAQSLV 663
N G+ K+ +S +
Sbjct: 535 NENGITKICGRSWI 548
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 201/421 (47%), Gaps = 24/421 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P + WN +++ Y + +++ + M+ +GL PD +T+P+++K CS+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G VHG+ + GFD D V S + Y + A+ VF M E+ VSW ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y ++ EEA +++ M + + A V GL+K+ + LV K +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVD------GLVKSGD-------LVNAKKLFD 231
Query: 250 NMVVRN-----AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
M R+ +M+D Y K G M A L E DV W+ LI GY NG A +
Sbjct: 232 EMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ--KLESEVIVETALIDMY 362
M + VKP+ + L+SAC G + + ++ ++ K S +V ALIDM
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMN 350
Query: 363 AKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
AKC + + K+F + ++ + +++ G + EAI+LF++M+ + + PD F
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
+L +++ + + L+R + L + S +V++ S+ G L A+ + +P
Sbjct: 411 VILKVCGQSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 481 L 481
Sbjct: 470 F 470
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 282/581 (48%), Gaps = 71/581 (12%)
Query: 154 NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE 213
S +A +G A+ VFD M E V+WNTM+ Y R +EA+ ++ ++ + +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 214 PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 273
PD + ++L C L NV+ GR++ +LV GF ++ V N+++DMY KC A +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 274 ANEM--DETDVVTWTTL-------------------------------INGYILNGDARS 300
+M D + VTW +L I+G+ G S
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGS-LNYGKCLHA------W----------- 342
L L + ML KP+ + +SL++AC + S + YG+ +HA W
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 343 -----------AIRQKLESEVIVETA---LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
A+R+ EV+ + + +ID K + +VF +K W
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
+++G+ N +A++ F +M+ V D+ + ++L A + LA L IH LI G
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG 367
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
F V + LV++Y+KCG + A F I +G HG + A+ L
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIA--NKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
++ M+ SG++P+ +TF +L CSH+GLV+EG +F+ M+K ++I VDH TC+ID+ G
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 569 RAGQLNDAYNLIRT----MPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 624
R G L +A +L T + N++ W LLGAC +H + ELG ++ EP
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 625 NYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
++VLL+NLY + GRW++ E+VR + G++K P S +EV
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEV 586
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 212/475 (44%), Gaps = 73/475 (15%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+ +WNTM+ Y ++G +A+ LF ++ S PD++++ I+ C+ L
Sbjct: 26 VFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK-PDDYSFTAILSTCASLG 84
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAM------------------------------ 159
+ G + + ++GF V NSL+ M
Sbjct: 85 NVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSL 144
Query: 160 ---YMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 216
YMNA + E A VF M ++ +WN MI+G+ + E L ++ M+++ +PDC
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 217 ATVVSVLPACGL-LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLAN 275
T S++ AC NV GR VHA++ + G+ + +N++L Y K G +A
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 276 EMD-------------------------------ETDVVTWTTLINGYILNGDARSALML 304
++ E ++VTWTT+I GY NGD AL
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
M+ GV + + ++L AC L +GK +H I + V AL+++YAK
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C + + F + K WN +L F + L +A++L+ M+ ++PDN TF L
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGL 444
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYR--LEV--ASILVDIYSKCGSLGYAHHI 475
L + +++ I +++ YR LEV + ++D++ + G L A +
Sbjct: 445 LTTCSHSGLVEEGCMIFESMVKD---YRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 179/381 (46%), Gaps = 46/381 (12%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DL 128
+F +P+R F+WN M+ + G+ L+LF EM+ S PD +T+ ++ ACS D
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK-PDCYTFSSLMNACSADS 218
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN--- 185
S + G VH + K G+ +NS+L+ Y G ++ A + ++ T VSWN
Sbjct: 219 SNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSII 278
Query: 186 ----------------------------TMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 217
TMI GY RN E+ALR + MM +GV+ D
Sbjct: 279 DACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHF 338
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
+VL AC L + G+ +H + GF G V NA++++Y KCG +KEA ++
Sbjct: 339 AYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI 398
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
D+V+W T++ + ++G A AL L M+ G+KP+ V+ LL+ C G + G
Sbjct: 399 ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGC 458
Query: 338 CLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTS-------KKRTAPWNAL 389
+ ++ ++ EV T +IDM+ + G+L+ + T+ + W L
Sbjct: 459 MIFESMVKDYRIPLEVDHVTCMIDMFGR--GGHLAEAKDLATTYSSLVTDSSNNSSWETL 516
Query: 390 L---SGFIHNSLVREAIQLFK 407
L S H L RE ++ K
Sbjct: 517 LGACSTHWHTELGREVSKVLK 537
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 253/470 (53%), Gaps = 7/470 (1%)
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 258
A++ + + G+ D AT ++ C + V G + + G M + N ++
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 259 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLV 318
+MYVK + +A L ++M + +V++WTT+I+ Y + AL L +ML + V+PN+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
+ +S+L +C + + LH I++ LES+V V +ALID++AK + VF +
Sbjct: 164 TYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
WN+++ GF NS A++LFK+M + AT S+L A LA L+ M
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 439 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 498
H ++++ + L + + LVD+Y KCGSL A +FN + +
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFN--QMKERDVITWSTMISGLAQ 336
Query: 499 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD 558
+G+ + A+ LF +M SG +PN IT VL ACSHAGL+++G F+ M K + I P+ +
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 559 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 618
HY C+IDLLG+AG+L+DA L+ M +P+ W LLGAC N+ L E AA+ L
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
Query: 619 EPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+PE+ G Y LL+N+YA +W E +R + G++K P S +EV +
Sbjct: 457 DPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQ 506
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 158/267 (59%), Gaps = 6/267 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +PQR++ SW TM+ Y + AL L V M+ + P+ +TY ++++C+ +S
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR-PNVYTYSSVLRSCNGMS 176
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ M +H K G + D FV+++L+ ++ GE E A VFD M + WN++I
Sbjct: 177 DVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ +N+R++ AL ++ RM AG + AT+ SVL AC L +ELG + H + + +
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQ 291
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++++ NA++DMY KCG +++A + N+M E DV+TW+T+I+G NG ++ AL L M
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMK 351
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYG 336
G KPN +++ +L AC G L G
Sbjct: 352 SSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 40/418 (9%)
Query: 114 DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 173
D+ TY +IK C + G + + G F+ N L+ MY+ A +F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 174 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE 233
D M ++ V+SW TMI+ Y + ++AL + M+ V P+ T SVL +C + +V
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV- 178
Query: 234 LGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI 293
R +H + ++G ++ VR+A++D++ K G+ ++A + +EM D + W ++I G+
Sbjct: 179 --RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 294 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
N + AL L + M G ++ S+L AC L G H + K + ++I
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLI 294
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
+ AL+DMY KC + +VF + ++ W+ ++SG N +EA++LF++M
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG 354
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
+P+ T +L A + H L+ G+ Y + + G
Sbjct: 355 TKPNYITIVGVLFACS-----------HAGLLEDGWYYFRSMKKLY-------GIDPVRE 396
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
H +I L GK G + AV L N+M +P+ +T+ ++L AC
Sbjct: 397 HYGCMIDLL--------------GKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGAC 437
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/537 (29%), Positives = 281/537 (52%), Gaps = 22/537 (4%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+H + D + L++ + A VF+ ++E V N++I + +N++
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
+A V++ M G+ D T +L AC + + + +H +++ G ++ V NA
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNA 157
Query: 257 MLDMYVKCGQM--KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
++D Y +CG + ++A L +M E D V+W +++ G + G+ R A R + E +
Sbjct: 158 LIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA----RRLFDEMPQ 213
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLH---AWAIRQKL-ESEVIVETALIDMYAKCNCGNL 370
+L+S ++L Y +C A+ + +K+ E + + ++ Y+K +
Sbjct: 214 RDLISWNTMLDG--------YARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 371 SYKVF--MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ +F M K W +++G+ L++EA +L QM+ ++ D A S+L A
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
L M IH L RS V + L+D+Y+KCG+L A +FN IP
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP--KKDLVS 383
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
G HGHG+ A+ LF++M + G++P+++TF +VL +C+HAGL+DEG+ F M
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
K + ++P V+HY C++DLLGR G+L +A +++TMP++PN +WGALLGAC H V++
Sbjct: 444 KVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIA 503
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+ +L+P + GNY LL+N+YAA W ++R + +G+ K S VE+
Sbjct: 504 KEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 203/428 (47%), Gaps = 36/428 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ + + ++ N+++R + Q +P+ A +F EM GL DNFTYP ++KACS S
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGL-FADNFTYPFLLKACSGQS 131
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAG--EKEQAQLVFDLMKEQTVVSWNTM 187
+L + +H K G D +V N+L+ Y G A +F+ M E+ VSWN+M
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+ G + +A R+++ M + D + ++L + + E+ + E+
Sbjct: 192 LGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGYARCREMSKAFELFEKMPER-- 245
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTLINGYILNGDARSALMLC 305
N V + M+ Y K G M+ A + ++M +VVTWT +I GY G + A L
Sbjct: 246 --NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
M+ G+K + +V S+L+AC G L+ G +H+ R L S V AL+DMYAKC
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
++ VF KK WN +L G + +EAI+LF +M + ++PD TF
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF---- 419
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGYAH 473
AVL H LI G Y ++E LVD+ + G L A
Sbjct: 420 --IAVLCSCN-----HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 474 HIFNIIPL 481
+ +P+
Sbjct: 473 KVVQTMPM 480
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 25/394 (6%)
Query: 223 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 282
LP C L V +++HA + + ++ + ++ C Q A + N++ E +V
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 283 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 342
+LI + N A + M G+ + + LL AC L K +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 343 AIRQKLESEVIVETALIDMYAKCNCGNL----SYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+ L S++ V ALID Y++ CG L + K+F K S++ T WN++L G +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSR--CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA-S 457
+R+A +LF +M +D+ ++N++L YA ++ +A + + R V+ S
Sbjct: 201 LRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPE-----RNTVSWS 251
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 517
+V YSK G + A +F+ +PL Y + G + A L +QMV SG+
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGL 311
Query: 518 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 577
+ + S+L AC+ +GL+ G+ + +LK+ + ++D+ + G L A+
Sbjct: 312 KFDAAAVISILAACTESGLLSLGMRIHS-ILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 578 NLIRTMPIKPNHAVWGALLGACVSH----ENVEL 607
++ +P K + W +L H E +EL
Sbjct: 371 DVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIEL 403
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 121/230 (52%), Gaps = 17/230 (7%)
Query: 70 LFDT--LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+FD LP +++ +W ++ Y + G +A L +M+ SGL D I+ AC++
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF-DAAAVISILAACTE 327
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L +G+ +H + ++ + +V N+LL MY G ++A VF+ + ++ +VSWNTM
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTM 387
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG-------REVHA 240
++G + +EA+ +++RM G+ PD T ++VL +C ++ G +V+
Sbjct: 388 LHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 289
LV + +G +V D+ + G++KEA + M E +VV W L+
Sbjct: 448 LVPQVEHYGCLV------DLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 491
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 180/598 (30%), Positives = 304/598 (50%), Gaps = 36/598 (6%)
Query: 86 MRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG--MTFK 143
+R V+ G A++LF + + L Y + +AC++ L G+ +H ++
Sbjct: 33 LRTLVRSGDIRRAVSLFYS---APVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHP 89
Query: 144 AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRV 203
+ + + N L+ MY G A+ VFD M E+ VVSW +I GY + +E +
Sbjct: 90 YCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCL 149
Query: 204 YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK 263
++ M+ + P+ T+ SVL +C E G++VH L + G ++ V NA++ MY +
Sbjct: 150 FSSML-SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGR 204
Query: 264 C---GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV---KPNL 317
C EAW + + ++VTW ++I + + A+ + M +GV + L
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL 264
Query: 318 VSVASLLSACGSFGSLNYGKC---LHAWAIRQKLESEVIVETALIDMYAK-----CNCGN 369
+++ S L KC LH+ ++ L ++ V TALI +Y++ +C
Sbjct: 265 LNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC-- 322
Query: 370 LSYKVFMKTSKKR-TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
YK+FM+ S R WN +++ F R AI LF Q+ + + PD TF+S+L A
Sbjct: 323 --YKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKAC 379
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
A L + A++IH +I+ GFL + + L+ Y+KCGSL +F+ +
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD--DMDSRDVVS 437
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
Y HG + + +F +M + P+ TF ++L ACSHAG V+EGL +F+ M
Sbjct: 438 WNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
++ + +P ++HY C+ID+L RA + +A +I+ MP+ P+ VW ALLG+C H N LG
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554
Query: 609 EVAARWTFEL-EPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
++AA EL EP N+ +Y+ ++N+Y A G + +A + +RK P S E+
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEI 612
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 208/429 (48%), Gaps = 32/429 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FDT+P+R++ SW ++ YVQ G + LF M+ P+ FT ++ +C
Sbjct: 118 VFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH--CFPNEFTLSSVLTSCR--- 172
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMY---MNAGEKEQAQLVFDLMKEQTVVSWNT 186
+ G VHG+ K G +V N++++MY + +A VF+ +K + +V+WN+
Sbjct: 173 -YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVV----SVLPACGLLKNVELGR---EVH 239
MI + N ++A+ V+ RM GV D AT++ S+ + L+ N E+ + ++H
Sbjct: 232 MIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPN-EVSKCCLQLH 290
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVK-CGQMKEAWWLANEMDET-DVVTWTTLINGYILNGD 297
+L + G V A++ +Y + + + L EM D+V W +I + + D
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-D 349
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
A+ L + E + P+ + +S+L AC + + +HA I+ ++ ++ +
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 417
LI YAKC +L +VF + WN++L + + V + +F++M D+ PD
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-----LYRLEVASILVDIYSKCGSLGYA 472
+ATF +LL A + +++ + I RS F L +L + ++D+ S+ A
Sbjct: 467 SATFIALLSACSHAGRVEEGLRI----FRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 473 HHIFNIIPL 481
+ +P+
Sbjct: 523 EEVIKQMPM 531
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 246/496 (49%), Gaps = 33/496 (6%)
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
+ +N + R++ + Y R+ G D + + +L A + + G E+H +
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA 301
+ + V +DMY CG++ A + +EM DVVTW T+I Y G A
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L M V P+ + + +++SACG G++ Y + ++ + I + + + TAL+ M
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 362 YAKCNCGNLSYKVFMK-------------------------------TSKKRTAPWNALL 390
YA C +++ + F K T KK W ++
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 391 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 450
S ++ + +EA+++F++M ++PD + S++ A A L L +A +H + +G
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
L + + L+++Y+KCG L +F +P HG A+SLF
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMP--RRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 570
+M Q V+PN++TF VL+ CSH+GLV+EG +F M ++ I P ++HY C++DL GRA
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 571 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 630
L +A +I +MP+ N +WG+L+ AC H +ELG+ AA+ ELEP++ G VL++
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 554
Query: 631 NLYAAVGRWRDAENVR 646
N+YA RW D N+R
Sbjct: 555 NIYAREQRWEDVRNIR 570
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 235/504 (46%), Gaps = 35/504 (6%)
Query: 11 TATQCESLLRKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 70
+T ++L K S SL+ K+LHA I +
Sbjct: 8 ASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALN-V 66
Query: 71 FDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
F ++P +N +R + P + + + H G L D F++ I+KA S +S
Sbjct: 67 FSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRL-DQFSFLPILKAVSKVS 125
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G+ +HG+ FK D FV+ + MY + G A+ VFD M + VV+WNTMI
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE----- 244
Y R +EA +++ M D+ V PD + +++ ACG N+ R ++ + E
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 245 ---------------------KGFWGNMVVRN-----AMLDMYVKCGQMKEAWWLANEMD 278
+ F+ M VRN AM+ Y KCG++ +A + ++ +
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
+ D+V WTT+I+ Y+ + + AL + M G+KP++VS+ S++SAC + G L+ K
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+H+ LESE+ + ALI+MYAKC + + VF K ++ W+++++ +
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVAS 457
+A+ LF +M ++V+P+ TF +L + +++ I + +LE
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPL 481
+VD++ + L A + +P+
Sbjct: 486 CMVDLFGRANLLREALEVIESMPV 509
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 178/387 (45%), Gaps = 46/387 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + R + +WNTM+ Y + G +A LF EM S + +PD I+ AC
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV-MPDEMILCNIVSACGRTG 226
Query: 130 FLDMGVGVHGMTFKAGFDLDT-------------------------------FVQNSLLA 158
+ ++ + +DT FV ++++
Sbjct: 227 NMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVS 286
Query: 159 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
Y G + AQ++FD +++ +V W TMI+ Y ++ +EALRV+ M +G++PD +
Sbjct: 287 GYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
+ SV+ AC L ++ + VH+ + G + + NA+++MY KCG + + +M
Sbjct: 347 MFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
+VV+W+++IN ++G+A AL L M E V+PN V+ +L C G + GK
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 339 LHA-----WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSG 392
+ A + I KLE ++D++ + N + +V W +L+S
Sbjct: 467 IFASMTDEYNITPKLEH----YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 393 F-IHNSLVREAIQLFKQMLVKDVQPDN 418
IH L + F + +++PD+
Sbjct: 523 CRIHGEL---ELGKFAAKRILELEPDH 546
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/622 (25%), Positives = 307/622 (49%), Gaps = 39/622 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R++ +W TM+ Y G+P+ A+ L+ M+ S + F Y ++KAC +
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G+ V+ K D + NS++ MY+ G +A F + + SWNT+I+
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 190 GYFRNNRAEEALRVYNRM---------------MDAGVEPDCATVVSV------------ 222
GY + +EA+ +++RM +D G +V +
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFAL 241
Query: 223 ---LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD- 278
L AC + +G+++H V + G + +A++DMY CG + A + ++
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 279 --ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
+ V W ++++G+++N + +AL L + + + +++ L C ++ +L G
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG 361
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFI 394
+H+ + E + IV + L+D++A N GN+ ++K+F + K ++ L+ G +
Sbjct: 362 LQVHSLVVVSGYELDYIVGSILVDLHA--NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+ A LF++++ + D +++L + LA L IH I+ G+
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
A+ LVD+Y KCG + +F+ + +G++G E A F++M+
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFD--GMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
G++PN++TF +L AC H+GL++E S + M ++ + P ++HY C++DLLG+AG
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 575 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 634
+A LI MP++P+ +W +LL AC +H+N L V A + P++ Y L+N YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 635 AVGRWRDAENVRDMVNVVGLRK 656
+G W VR+ +G ++
Sbjct: 658 TLGMWDQLSKVREAAKKLGAKE 679
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 270/602 (44%), Gaps = 95/602 (15%)
Query: 122 IKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 181
++ C + G + K G + F+ N++++MY++ A VFD M E+ +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLKNVELGREVHA 240
V+W TM++GY + + +A+ +Y RM+D+ E + S VL ACGL+ +++LG V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQ-------------------------------MKE 269
+ ++ G++V+ N+++DMYVK G+ M E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 270 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 329
A L + M + +VV+W LI+G++ G R+ L R M EG+ + ++ L AC
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVR-MQREGLVLDGFALPCGLKACSF 250
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTS---KKRTA 384
G L GK LH ++ LES +ALIDMY+ NCG+L Y VF + A
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS--NCGSLIYAADVFHQEKLAVNSSVA 308
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
WN++LSGF+ N A+ L Q+ D+ D+ T + L +L+ + +H +
Sbjct: 309 VWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 445 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 504
+ SG+ V SILVD+++ G++ AH +F+ +P K G +
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCV--KSGFNSL 426
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACS-------------------------------- 532
A LF ++++ G+ +Q +++L CS
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 533 ---HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIK 586
G +D G+ LF ML++ V +T II G+ G++ +A+ M I+
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERD-----VVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 587 PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG------NYVLLANLYAAVGRWR 640
PN + LL AC +E AR T E G +Y + +L G ++
Sbjct: 542 PNKVTFLGLLSACRHSGLLE----EARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 641 DA 642
+A
Sbjct: 598 EA 599
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 191/430 (44%), Gaps = 49/430 (11%)
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
D + + L CG ++ + G + A V ++G N+ + N ++ MYV + +A +
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVKPNLVSVASLLSACGSFGSL 333
+EM E ++VTWTT+++GY +G A+ L R ML E N +++L ACG G +
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC---GNLSYKVFMKTSKKRTAPWNALL 390
G ++ ++ L +V++ +++DMY K N S+K ++ S + WN L+
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPS---STSWNTLI 180
Query: 391 SGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL-------------------------L 425
SG+ L+ EA+ LF +M QP+ ++N L L
Sbjct: 181 SGYCKAGLMDEAVTLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL 236
Query: 426 PAYAVLADLK---------QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+A+ LK +HC +++SG S L+D+YS CGSL YA +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 477 NIIPLXXXXXXXX-XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
+ L + + E A+ L Q+ QS + + T + L C +
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYV 356
Query: 536 LVDEGLSLFKF-MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGA 594
+ GL + ++ +++ +V + ++DL G + DA+ L +P K A G
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 595 LLGACVSHEN 604
+ G S N
Sbjct: 415 IRGCVKSGFN 424
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 184/672 (27%), Positives = 310/672 (46%), Gaps = 111/672 (16%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++ +R+LF+W+ M+ Y + R + LF M+ G+ LPD+F +P I++ C++
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV-LPDDFLFPKILQGCANCG 195
Query: 130 FLDMGVGVHGMTFKAGF-------------------------------DLDTFVQNSLLA 158
++ G +H + K G + D NS+L
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 159 MYMNAGEKEQA-QLVFDLMKE--------------------------------------Q 179
Y G+ E+A +LV ++ KE
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
V +W MI+G N +AL ++ +M AGV P+ T++S + AC LK + G EVH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 299
++ + GF +++V N+++DMY KCG++++A + + + DV TW ++I GY G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 300 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
A L M ++PN+++ +++S G + G A + Q++E + V+
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMIS-----GYIKNGDEGEAMDLFQRMEKDGKVQ---- 486
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
+ TA WN +++G+I N EA++LF++M P++
Sbjct: 487 ---------------------RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
T SLLPA A L K IH ++R V + L D Y+K G + Y+ IF +
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF--L 583
Query: 480 PLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
+ Y HG A++LFNQM G+ PN+ T +S++ A G VDE
Sbjct: 584 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDE 643
Query: 540 GLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGAC 599
G +F + + IIP ++H + ++ L GRA +L +A I+ M I+ +W + L C
Sbjct: 644 GKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGC 703
Query: 600 VSHENVELGEVAARWTFELEPENTGNYVLLANLY---AAVGRWRDAENV-RDMVNVVGLR 655
H ++++ AA F LEPENT +++ +Y A +GR + RD + L+
Sbjct: 704 RIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNL----LK 759
Query: 656 KLPAQSLVEVRS 667
K QS +EVR+
Sbjct: 760 KPLGQSWIEVRN 771
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 231/488 (47%), Gaps = 37/488 (7%)
Query: 117 TYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 176
TY ++++C D + +G +H F + D FV+ LL+MY G A+ VFD M
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 177 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 236
+E+ + +W+ MI Y R NR E +++ MM GV PD +L C +VE G+
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
+H++V + G + V N++L +Y KCG++ A M E DV+ W +++ Y NG
Sbjct: 202 VIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNG 261
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
A+ L + M EG+ P LV+ L+ G + L GKC A + QK+E+ I
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILI---GGYNQL--GKCDAAMDLMQKMETFGITA- 315
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
D++ W A++SG IHN + +A+ +F++M + V P
Sbjct: 316 ---DVFT----------------------WTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+ T S + A + L + Q +H ++ GF+ + V + LVD+YSKCG L A +F
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ + Y + G+ A LF +M + ++PN IT+ +++ G
Sbjct: 411 DSVK--NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWG 593
E + LF+ M K ++ + II + G+ ++A L R M PN
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 594 ALLGACVS 601
+LL AC +
Sbjct: 529 SLLPACAN 536
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 194/438 (44%), Gaps = 42/438 (9%)
Query: 165 EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP 224
+ + L F KE ++ + + RN EA + + + G + +T + +L
Sbjct: 31 KSRKKNLSFTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLE 89
Query: 225 ACGLLKNVELGREVHA---LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 281
+C ++ LGR +HA L E ++ V +L MY KCG + +A + + M E +
Sbjct: 90 SCIDSGSIHLGRILHARFGLFTEP----DVFVETKLLSMYAKCGCIADARKVFDSMRERN 145
Query: 282 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
+ TW+ +I Y R L R+M+ +GV P+ +L C + G + GK +H+
Sbjct: 146 LFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHS 205
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 401
I+ + S + V +++ +YAKC + + K F + ++ WN++L + N E
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEE 265
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 461
A++L K+M + + P T+N L+ Y L AM++ + ++E I D
Sbjct: 266 AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL---------MQKMETFGITAD 316
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 521
+++ + H +G A+ +F +M +GV PN
Sbjct: 317 VFTWTAMISGLIH------------------------NGMRYQALDMFRKMFLAGVVPNA 352
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 581
+T S + ACS ++++G + +K I ++ + ++D+ + G+L DA +
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-LVDMYSKCGKLEDARKVFD 411
Query: 582 TMPIKPNHAVWGALLGAC 599
++ K + + G C
Sbjct: 412 SVKNKDVYTWNSMITGYC 429
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 164/364 (45%), Gaps = 18/364 (4%)
Query: 295 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL--ESEV 352
NG A + +G K + LL +C GS++ G+ LHA R L E +V
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDV 115
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
VET L+ MYAKC C + KVF ++ W+A++ + + RE +LF+ M+
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
V PD+ F +L A D++ IH +I+ G L V++ ++ +Y+KCG L +A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
F + Y ++G E AV L +M + G+ P +T+ ++ +
Sbjct: 236 TKFFR--RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNH 589
G D + L + M + I V +T +I L G A ++ R M + PN
Sbjct: 294 QLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 590 AVWGALLGAC----VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENV 645
+ + AC V ++ E+ +A + F ++ GN L ++Y+ G+ DA V
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGF-IDDVLVGNS--LVDMYSKCGKLEDARKV 409
Query: 646 RDMV 649
D V
Sbjct: 410 FDSV 413
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 275/525 (52%), Gaps = 61/525 (11%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN-NRAEEALRVYNRMMD 209
F N ++A + +G+ + A VF M+ + ++WN+++ G ++ +R EA +++ D
Sbjct: 62 FPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEA----HQLFD 117
Query: 210 AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA-----MLDMYVKC 264
EPD + +++ +C ++NV K + F+ M ++A M+ Y +
Sbjct: 118 EIPEPDTFSY-NIMLSC-YVRNVNFE-------KAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
G+M++A L M E + V+W +I+GYI GD A +V + GV
Sbjct: 169 GEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV---------- 218
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMK-TSKKRT 383
AW TA+I Y K L+ +F T K
Sbjct: 219 ----------------AW-------------TAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 384 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
WNA++SG++ NS + ++LF+ ML + ++P+++ +S L + L+ L+ IH
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
+ +S + + L+ +Y KCG LG A +F + + Y +HG+ +
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV--MKKKDVVAWNAMISGYAQHGNAD 367
Query: 504 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
A+ LF +M+ + ++P+ ITF +VL AC+HAGLV+ G++ F+ M++ +++ P DHYTC+
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427
Query: 564 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 623
+DLLGRAG+L +A LIR+MP +P+ AV+G LLGAC H+NVEL E AA +L +N
Sbjct: 428 VDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNA 487
Query: 624 GNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
YV LAN+YA+ RW D VR + + K+P S +E+R++
Sbjct: 488 AGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 151/300 (50%), Gaps = 17/300 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA---CS 126
FD +P + SWNTM+ Y + G A LF M+ + ++ +I C
Sbjct: 146 FFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK-----NEVSWNAMISGYIECG 200
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMKEQTVVSWN 185
DL FK +++ YM A + E A+ +F D+ + +V+WN
Sbjct: 201 DLE-------KASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
MI+GY N+R E+ L+++ M++ G+ P+ + + S L C L ++LGR++H +V +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
++ +++ MY KCG++ +AW L M + DVV W +I+GY +G+A AL L
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAK 364
R M+ ++P+ ++ ++L AC G +N G +R K+E + T ++D+ +
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 195/414 (47%), Gaps = 30/414 (7%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTY-PIIIKACSDLSFLDMG 134
Q +F N ++ V+ G AL +F G+ + T+ ++I D S +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVF-----HGMRAKNTITWNSLLIGISKDPSRM--- 109
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRN 194
+ H + F + DTF N +L+ Y+ E+AQ FD M + SWNTMI GY R
Sbjct: 110 MEAHQL-FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 195 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR 254
E+A ++ MM+ E ++S CG ++E + +G +V
Sbjct: 169 GEMEKARELFYSMMEKN-EVSWNAMISGYIECG---DLEKASHFFKVAPVRG----VVAW 220
Query: 255 NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
AM+ Y+K +++ A + +M ++VTW +I+GY+ N L L R ML EG+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--S 371
+PN ++S L C +L G+ +H + L ++V T+LI MY C CG L +
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY--CKCGELGDA 338
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
+K+F KK WNA++SG+ + +A+ LF++M+ ++PD TF ++L A
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIPL 481
+ M ++R Y++E + +VD+ + G L A + +P
Sbjct: 399 GLVNIGMAYFESMVRD---YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/446 (33%), Positives = 242/446 (54%), Gaps = 13/446 (2%)
Query: 212 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 271
EP+ S+L C L+ ++ G VH L+ N+ + + ++ +Y CG + A
Sbjct: 90 TEPE--IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAH 147
Query: 272 WLANEMDETDV--VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 329
+ + M + D W +LI+GY G A+ L M +GVKP+ + +L ACG
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 389
GS+ G+ +H +++ +V V AL+ MYAKC + VF K WN++
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
L+G++H+ L+ EA+ +F+ M+ ++PD +S+L A + K +H ++IR G
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 509
+ L VA+ L+ +YSK G LG A IF+ + + K+ +G + F
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFD--QMLERDTVSWNAIISAHSKNSNG---LKYF 379
Query: 510 NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGR 569
QM ++ +P+ ITF SVL C++ G+V++G LF M K++ I P ++HY C+++L GR
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 570 AGQLNDAYNLI-RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 628
AG + +AY++I + M ++ VWGALL AC H N ++GEVAA+ FELEP+N N+ L
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 629 LANLYAAVGRWRDAENVRDMVNVVGL 654
L +Y+ R D E VR M+ GL
Sbjct: 500 LIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 203/368 (55%), Gaps = 9/368 (2%)
Query: 109 GLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ 168
G++L + + +++ C L +D GV VH + + + + L+ +Y + G E
Sbjct: 86 GISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 169 AQLVFDLM--KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 226
A VFD M ++ + +WN++I+GY + E+A+ +Y +M + GV+PD T VL AC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 227 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 286
G + +V++G +H + ++GF ++ V NA++ MY KCG + +A + + + D V+W
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
+++ GY+ +G AL + R+M+ G++P+ V+++S+L+ SF +G+ LH W IR+
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSF---KHGRQLHGWVIRR 322
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
+E E+ V ALI +Y+K + +F + ++ T WNA++S NS ++ F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYF 379
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSK 465
+QM + +PD TF S+L A ++ + + + G ++E + +V++Y +
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 466 CGSLGYAH 473
G + A+
Sbjct: 440 AGMMEEAY 447
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 196/374 (52%), Gaps = 31/374 (8%)
Query: 70 LFDTLPQR--SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+FD + +R S F+WN+++ Y ++G+ DA+ L+ +M G+ PD FT+P ++KAC
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK-PDRFTFPRVLKACGG 207
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
+ + +G +H K GF D +V N+L+ MY G+ +A+ VFD++ + VSWN+M
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
+ GY + EAL ++ M+ G+EPD + SVL K+ GR++H V +G
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGM 324
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
+ V NA++ +Y K GQ+ +A ++ ++M E D V+W +I+ + N + L
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQ 381
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA-----WAIRQKLESEVIVETALIDMY 362
M KP+ ++ S+LS C + G + G+ L + + I K+E ++++Y
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEH----YACMVNLY 437
Query: 363 AKCNCGNLSYKVFMKTSKKRTAP--WNALLSG-FIH-NSLVRE--AIQLFKQMLVKDVQP 416
+ +Y + ++ P W ALL ++H N+ + E A +LF +++P
Sbjct: 438 GRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLF------ELEP 491
Query: 417 DNA-TFNSLLPAYA 429
DN F L+ Y+
Sbjct: 492 DNEHNFELLIRIYS 505
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/600 (29%), Positives = 283/600 (47%), Gaps = 82/600 (13%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P + + M+ Y + R DALNLF EM P+
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM-------------PV--------- 94
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
D NS+++ + G+ A +FD M E++VVSW M+N
Sbjct: 95 ------------------RDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVN 136
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G FR+ + ++A R++ +M P VK+ W
Sbjct: 137 GCFRSGKVDQAERLFYQM----------------P-----------------VKDTAAW- 162
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N+M+ Y++ G++ +A L +M +V++WTT+I G N + AL L + ML
Sbjct: 163 -----NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+K +++AC + + + G +H I+ E V +LI YA C
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
S KVF + ++ A W ALLSG+ N +A+ +F ML + P+ +TF S L + +
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
L L +H ++ G V + LV +YS G++ A +F I +
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSW 395
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
+HG G+ A +F QM++ +P++ITFT +L ACSH G +++G LF +M
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS 455
Query: 550 Q-HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ I + HYTC++D+LGR G+L +A LI M +KPN VW ALL AC H +V+ G
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
E AA F L+ +++ YVLL+N+YA+ GRW + +R + G+ K P S V +R +
Sbjct: 516 EKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGK 575
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/533 (30%), Positives = 258/533 (48%), Gaps = 64/533 (12%)
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF-WGNMVVRNAM 257
+A+ + G+ + S+L CG K+++ G+ +H +K GF N ++ N +
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 258 LDMYVKCGQMKEAW-------------W------------------LANEMDETDVVTWT 286
+ MY+KCG+ +A W + + M E DVV+W
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
T++ GY +G+ AL + G+K N S A LL+AC L + H +
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 347 KLESEVIVETALIDMYAKC-----------------------------NCGNL--SYKVF 375
S V++ ++ID YAKC G++ + K+F
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 376 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
+ +K W AL++G++ A+ LF++M+ V+P+ TF+S L A A +A L+
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 436 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 495
IH Y+IR+ V S L+D+YSK GSL + +F I
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD-DKHDCVFWNTMISA 387
Query: 496 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
+HG G A+ + + M++ VQPN+ T +L+ACSH+GLV+EGL F+ M QH I+P
Sbjct: 388 LAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVP 447
Query: 556 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWT 615
+HY C+IDLLGRAG + I MP +P+ +W A+LG C H N ELG+ AA
Sbjct: 448 DQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
Query: 616 FELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+L+PE++ Y+LL+++YA G+W E +R ++ + K A S +E+ +
Sbjct: 508 IKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKK 560
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 191/435 (43%), Gaps = 66/435 (15%)
Query: 98 ALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDL-DTFVQNSL 156
A++ + G+ LP + ++ + C D L G +H GF +T + N L
Sbjct: 30 AVSRLESLTQQGIRLPFDLLASLL-QQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 157 LAMYMNAGEK-------------------------------EQAQLVFDLMKEQTVVSWN 185
+ MYM G+ +A++VFD M E+ VVSWN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
TM+ GY ++ EAL Y +G++ + + +L AC + ++L R+ H V
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEA--------------WW-----------------LA 274
GF N+V+ +++D Y KCGQM+ A W L
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
EM E + V+WT LI GY+ G AL L R M+ GVKP + +S L A S SL
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP-WNALLSGF 393
+GK +H + IR + IV ++LIDMY+K S +VF K WN ++S
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN-IHCYLIRSGFLYR 452
+ L +A+++ M+ VQP+ T +L A + +++ + ++ G +
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 453 LEVASILVDIYSKCG 467
E + L+D+ + G
Sbjct: 449 QEHYACLIDLLGRAG 463
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 35/355 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++P+R + SWNTM+ Y Q G H+AL + E SG+ + F++ ++ AC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF-NEFSFAGLLTACVKSR 193
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK------------ 177
L + HG AGF + + S++ Y G+ E A+ FD M
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 178 -------------------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
E+ VSW +I GY R AL ++ +M+ GV+P+ T
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
S L A + ++ G+E+H + N +V ++++DMY K G ++ + + D
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 279 ET-DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG- 336
+ D V W T+I+ +G AL + M+ V+PN ++ +L+AC G + G
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNC-GNLSYKVFMKTSKKRTAPWNALL 390
+ + ++ + + LID+ + C L K+ + WNA+L
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 263/511 (51%), Gaps = 33/511 (6%)
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
WN +I + +AL + M++ GV D ++ VL AC L V+ G ++H +K
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+ G W ++ ++N ++ +Y+KCG + + + + M + D V++ ++I+GY+ G SA
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSF---------------------------GSLNYG 336
L +M +E NL+S S++S G + +G
Sbjct: 209 LFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHG 266
Query: 337 KCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
+ A + + +V+ +ID YAK + + +F + + +N++++G++
Sbjct: 267 RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 396 NSLVREAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
N EA+++F M + + PD+ T +LPA A L L +A+++H Y++ F +
Sbjct: 327 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK 386
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
+ L+D+YSKCGS+ +A +F I HG GE A + Q+ +
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIE--NKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
++P+ ITF VL+ACSH+GLV EGL F+ M ++H+I P + HY C++D+L R+G +
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 575 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 634
A NLI MP++PN +W L AC H+ E GE+ A+ N +YVLL+N+YA
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Query: 635 AVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+ G W+D VR M+ + K+P S +E+
Sbjct: 565 SFGMWKDVRRVRTMMKERKIEKIPGCSWIEL 595
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 236/538 (43%), Gaps = 80/538 (14%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
F WN +++ + P AL L M+ +G+++ D F+ +++KACS L F+ G+ +HG
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSV-DKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 199
K G D F+QN L+ +Y+ G ++ +FD M ++ VS+N+MI+GY +
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 200 ALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 258
A +++ M M+ +++S V++ ++ A + EK +++ N+M+
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTS--DGVDIASKLFADMPEK----DLISWNSMI 259
Query: 259 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM---------- 308
D YVK G++++A L + M DVVTW T+I+GY G A L M
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 309 LLEG----------------------VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
++ G + P+ ++ +L A G L+ +H + + +
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
+ + ALIDMY+KC + VF K WNA++ G + L A +
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSK 465
Q+ ++PD+ TF +L A + +K+ + + R + RL+ +VDI S+
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Query: 466 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 525
GS+ E+A +L +M V+PN + +
Sbjct: 500 SGSI---------------------------------ELAKNLIEEM---PVEPNDVIWR 523
Query: 526 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
+ L ACSH + G + K ++ Q P Y + ++ G D +RTM
Sbjct: 524 TFLTACSHHKEFETGELVAKHLILQAGYNP--SSYVLLSNMYASFGMWKDVRR-VRTM 578
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 41/329 (12%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R S+N+M+ YV+ G A LF M + + + ++ +I + S
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM---PMEMKNLISWNSMISGYAQTS 234
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
GV + F + D NS++ Y+ G E A+ +FD+M + VV+W TMI+
Sbjct: 235 ---DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMID 291
Query: 190 -------------------------------GYFRNNRAEEALRVYNRM-MDAGVEPDCA 217
GY +N EAL +++ M ++ + PD
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
T+V VLPA L + ++H + EK F+ + A++DMY KCG ++ A + +
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI 411
Query: 278 DETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
+ + W +I G ++G SA ML ++ L +KP+ ++ +L+AC G + G
Sbjct: 412 ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS-LKPDDITFVGVLNACSHSGLVKEG 470
Query: 337 -KCLHAWAIRQKLESEVIVETALIDMYAK 364
C + K+E + ++D+ ++
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P R + ++N+MM YVQ +AL +F +M LPD+ T I++ A + L
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L + +H + F L + +L+ MY G + A LVF+ ++ +++ WN MI
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKN----VELGREVHALV 242
G + E A + ++ ++PD T V VL AC GL+K EL R H +
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 301
+G MV D+ + G ++ A L EM E + V W T + + + +
Sbjct: 485 PRLQHYGCMV------DILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG 538
Query: 302 LMLCRVMLLE-GVKPNLVSVASLLSACGSFG 331
++ + ++L+ G P+ S L + SFG
Sbjct: 539 ELVAKHLILQAGYNPS--SYVLLSNMYASFG 567
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/619 (28%), Positives = 293/619 (47%), Gaps = 95/619 (15%)
Query: 124 ACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNA-----GE---KEQAQL---- 171
+C+ + + G +H K+G D + ++ NS+L MY E ++ A+L
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 172 -------------------VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGV 212
+FD+M E++ VS+ T+I GY +NN+ EA+ ++ M + G+
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGI 169
Query: 213 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
+ T+ +V+ AC L + R + +L + G + V +L MY C +K+A
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 273 LANEMDETDVVTWTTLINGY--------------------------ILNGDARS-----A 301
L +EM E ++VTW ++NGY +++G R A
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L+ ML G+KP+ V + LLSA + G LH +++ + ++ +I
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-------- 413
YA N L+ + F + K A NAL++GF+ N +V +A ++F Q KD
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 414 ------------------------VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
V+PD T S+ A + L L++ H YL S
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTI 469
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIP-LXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
+ + ++D+Y+KCGS+ A +IF+ + HGH ++A+ L
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
++ + ++PN ITF VL AC HAGLV+ G + F+ M H I P + HY C++DLLG
Sbjct: 530 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 569 RAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 628
+AG+L +A +I+ MP+K + +WG LL A +H NVE+ E+AA ++P + G V+
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVM 649
Query: 629 LANLYAAVGRWRDAENVRD 647
L+N+YA GRW D VR+
Sbjct: 650 LSNVYADAGRWEDVALVRE 668
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 213/480 (44%), Gaps = 70/480 (14%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+RS S+ T+++ Y Q + +A+ LF EM + G+ L + T +I ACS L
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIML-NEVTLATVISACSHLG 187
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ + + K + FV +LL MY + A+ +FD M E+ +V+WN M+N
Sbjct: 188 GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLN 247
Query: 190 GY-------------------------------FRNNRAEEALRVYNRMMDAGVEPDCAT 218
GY R N+ +EAL Y M+ G++P
Sbjct: 248 GYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVM 307
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGF------------------------------- 247
+V +L A G ++H + ++GF
Sbjct: 308 MVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASV 367
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
++ RNA++ +VK G +++A + ++ + D+ +W +I+GY + + AL L R
Sbjct: 368 KDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 308 MLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M+ VKP+ +++ S+ SA S GSL GK H + + + A+IDMYAKC
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 367 CGNLSYKVFMKT---SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
+ +F +T S +PWNA++ G + + A+ L+ + ++P++ TF
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 424 LLPA--YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+L A +A L +L + G ++ +VD+ K G L A + +P+
Sbjct: 548 VLSACCHAGLVELGKTY-FESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPV 606
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 133/582 (22%), Positives = 228/582 (39%), Gaps = 148/582 (25%)
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA-------- 270
+VS L +C +V GR++H V + G N + N++L+MY KC + +A
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 271 -------------------WW----LANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
W L + M E V++TTLI GY N A+ L R
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M G+ N V++A+++SAC G + + L + AI+ KLE V V T L+ MY C C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV------------- 414
+ K+F + ++ WN +L+G+ L+ +A +LF Q+ KD+
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 415 ------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF------- 449
+P LL A A + + +H +++ GF
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 450 ----------------LYRLEVA--------SILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
L + E + + L+ + K G + A +F+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD--QTHDKD 401
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLF 544
Y + ++A+ LF +M+ S V+P+ IT SV A S G ++EG
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 545 KFMLKQHQIIPLVDHYT-CIIDLLGRAGQLNDAYNL------------------------ 579
++ IP D+ T IID+ + G + A N+
Sbjct: 462 DYL--NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 580 -------------IRTMPIKPNHAVWGALLGACVSHENVELGEV---AARWTFELEPENT 623
++++PIKPN + +L AC VELG+ + + +EP+
Sbjct: 520 HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD-I 578
Query: 624 GNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+Y + +L GR +A+ + ++K+P ++ V +
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEM--------IKKMPVKADVMI 612
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 5/233 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +FSWN M+ Y Q P AL+LF EMI S PD T + A S L
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK---EQTVVSWNT 186
L+ G H + + + +++ MY G E A +F K T+ WN
Sbjct: 453 SLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEK 245
+I G + A+ AL +Y+ + ++P+ T V VL AC VELG+ ++ +
Sbjct: 513 IICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDH 572
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
G ++ M+D+ K G+++EA + +M + DV+ W L++ +G+
Sbjct: 573 GIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGN 625
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 49/268 (18%)
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
++ S L +C S + G+ +H ++ L+S + ++++MYAKC + VF
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA--TFNSLLPAYAVLADLKQ 436
+K +A +N ++ G++ + + +A++LF DV P+ + ++ +L+ YA +
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLF------DVMPERSCVSYTTLIKGYAQNNQWSE 156
Query: 437 AMNI------------------------------HCYLIRS-GFLYRLE----VASILVD 461
AM + C +++S +LE V++ L+
Sbjct: 157 AMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 521
+Y C L A +F+ +P Y K G E A LF+Q+ + +
Sbjct: 217 MYCLCLCLKDARKLFDEMP--ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI---- 270
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLK 549
+++ +++ C +DE L + ML+
Sbjct: 271 VSWGTMIDGCLRKNQLDEALVYYTEMLR 298
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 210/367 (57%), Gaps = 6/367 (1%)
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
R ML V P+ + S++ +C +L GK +H A+ + V+ AL+ Y+KC
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ +VF + +K WN+L+SGF N L EAIQ+F QM +PD+ATF SLL
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLL 215
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
A A + +H Y+I G +++ + L+++YS+CG +G A +F+ +
Sbjct: 216 SACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD--KMKETN 273
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQS-GVQPNQITFTSVLHACSHAGLVDEGLSLF 544
YG HG+G+ AV LFN+M G PN +TF +VL AC+HAGLV+EG S++
Sbjct: 274 VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNH---AVWGALLGACVS 601
K M K +++IP V+H+ C++D+LGRAG L++AY I + A+W A+LGAC
Sbjct: 334 KRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKM 393
Query: 602 HENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
H N +LG A+ LEP+N G++V+L+N+YA G+ + ++RD + LRK S
Sbjct: 394 HRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYS 453
Query: 662 LVEVRSE 668
++EV ++
Sbjct: 454 VIEVENK 460
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 224/403 (55%), Gaps = 12/403 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF ++P F +N++++ ++ P + + M+ S ++ P N+T+ +IK+C+DLS
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVS-PSNYTFTSVIKSCADLS 121
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G GVH +GF LDT+VQ +L+ Y G+ E A+ VFD M E+++V+WN++++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ +N A+EA++V+ +M ++G EPD AT VS+L AC V LG VH + +G
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N+ + A++++Y +CG + +A + ++M ET+V WT +I+ Y +G + A+ L M
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 310 LE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNC 367
+ G PN V+ ++LSAC G + G+ ++ + +L V ++DM +
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 368 GNLSYKVF--MKTSKKRTAP--WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
+ +YK + + K TAP W A+L + +++ K+++ ++PDN +
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIA--LEPDNPGHHV 419
Query: 424 LLP-AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 465
+L YA+ + +I ++R+ R +V ++++ +K
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNL--RKQVGYSVIEVENK 460
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 393 FIHNSLVREAIQL---------FKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
F+ NS+++ +L +++ML +V P N TF S++ + A L+ L+ +HC+
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
+ SGF V + LV YSKCG + A +F+ +P + ++G +
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP--EKSIVAWNSLVSGFEQNGLAD 190
Query: 504 MAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
A+ +F QM +SG +P+ TF S+L AC+ G V G + ++++ + + V T +
Sbjct: 191 EAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN-VKLGTAL 249
Query: 564 IDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
I+L R G + A + M + N A W A++ A +H
Sbjct: 250 INLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTH 287
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/631 (28%), Positives = 305/631 (48%), Gaps = 75/631 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIK---ACS 126
+F+ L R+ +WNTM+ YV+ + A LF M D T+ +I +C
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR-----DVVTWNTMISGYVSCG 116
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
+ FL+ + F D+F N++++ Y +A L+F+ M E+ VSW+
Sbjct: 117 GIRFLEEARKL----FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
MI G+ +N + A+ ++ +M P CA V GL+KN L L G
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV------AGLIKNERLSEAAWVL----G 222
Query: 247 FWGNMV--------VRNAMLDMYVKCGQMKEAWWLANEMDE---------------TDVV 283
+G++V N ++ Y + GQ++ A L +++ + +VV
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVV 282
Query: 284 TWTTLINGYILNGDARSALMLCRVM----------LLEGVKPNLVSVASLLSACGSFGSL 333
+W ++I Y+ GD SA +L M +++G V V+ + A F +
Sbjct: 283 SWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG----YVHVSRMEDAFALFSEM 338
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 393
+ H+W + ++ YA L+ F KT +K T WN++++ +
Sbjct: 339 P-NRDAHSWNM-------------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAY 384
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 453
N +EA+ LF +M ++ +PD T SLL A L +L+ M +H ++++ + +
Sbjct: 385 EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDV 443
Query: 454 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 513
V + L+ +YS+CG + + IF+ + L Y HG+ A++LF M
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG-YAFHGNASEALNLFGSMK 502
Query: 514 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQL 573
+G+ P+ ITF SVL+AC+HAGLVDE + F M+ ++I P ++HY+ ++++ GQ
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF 562
Query: 574 NDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLY 633
+A +I +MP +P+ VWGALL AC + NV L VAA LEPE++ YVLL N+Y
Sbjct: 563 EEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMY 622
Query: 634 AAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
A +G W +A VR + ++K S V+
Sbjct: 623 ADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 242/475 (50%), Gaps = 34/475 (7%)
Query: 223 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 282
+P +K+ ++++A + G + + M+D K M A L N++ +V
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV 73
Query: 283 VTWTTLINGYILNGDARSALMLCRVMLLEGVK-PNLVSVASLLSACGSFGSLNYGKCLHA 341
+ ++I Y N + + + +L + + P+ + + +C S GS GK +H
Sbjct: 74 FLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHG 133
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF-------- 393
+ V+ E ALIDMY K + ++KVF + ++ WN+LLSG+
Sbjct: 134 HLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKK 193
Query: 394 --------IHNSLVR---------------EAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+ ++V EA+ F++M + ++PD + S+LP+ A
Sbjct: 194 AKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQ 253
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
L L+ IH Y R GFL + V + L+++YSKCG + A +F +
Sbjct: 254 LGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG--QMEGKDVISWS 311
Query: 491 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 550
Y HG+ A+ FN+M ++ V+PN ITF +L ACSH G+ EGL F M +
Sbjct: 312 TMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQD 371
Query: 551 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 610
+QI P ++HY C+ID+L RAG+L A + +TMP+KP+ +WG+LL +C + N+++ V
Sbjct: 372 YQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALV 431
Query: 611 AARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
A ELEPE+ GNYVLLAN+YA +G+W D +R M+ ++K P SL+EV
Sbjct: 432 AMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEV 486
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 183/358 (51%), Gaps = 39/358 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ + ++F +N+++R Y D + ++ +++ LPD FT+P + K+C+ L
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+G VHG K G +N+L+ MYM + A VFD M E+ V+SWN++++
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 190 GYFRNNRAEEALRVYNRMMD-------------------------------AGVEPDCAT 218
GY R + ++A +++ M+D AG+EPD +
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
++SVLP+C L ++ELG+ +H + +GF V NA+++MY KCG + +A L +M+
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
DV++W+T+I+GY +G+A A+ M VKPN ++ LLSAC G G
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG-L 362
Query: 339 LHAWAIRQKLESEVIVE--TALIDMYAKCNCGNLSYKVFMKTS---KKRTAPWNALLS 391
+ +RQ + E +E LID+ A+ G L V + + K + W +LLS
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLAR--AGKLERAVEITKTMPMKPDSKIWGSLLS 418
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 201/413 (48%), Gaps = 43/413 (10%)
Query: 105 MIHSGLTLPDNFTYPII--IKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMN 162
M G+ +N+ P + +K+ ++ ++ + +HG++ +F+ ++
Sbjct: 1 MAFHGIREVENYFIPFLQRVKSRNEWKKINASIIIHGLS------QSSFMVTKMVDFCDK 54
Query: 163 AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE-PDCATVVS 221
+ + A +F+ + V +N++I Y N+ + +R+Y +++ E PD T
Sbjct: 55 IEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPF 114
Query: 222 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 281
+ +C L + LG++VH + + G ++V NA++DMY+K + +A + +EM E D
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 282 VVTWTTLINGYILNGDARSA-----LML------------------C--------RVMLL 310
V++W +L++GY G + A LML C R M L
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
G++P+ +S+ S+L +C GSL GK +H +A R+ + V ALI+MY+KC +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 371 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+ ++F + K W+ ++SG+ ++ AI+ F +M V+P+ TF LL A +
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 431 LADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ ++ + + ++R + ++E L+D+ ++ G L A I +P+
Sbjct: 355 VGMWQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 15/242 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF + +++ SW M+ Y +G +A++ F EM +G+ PD + ++ +C+ L
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE-PDEISLISVLPSCAQLG 255
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L++G +H + GF T V N+L+ MY G QA +F M+ + V+SW+TMI+
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GL----LKNVELGREVHALV 242
GY + A A+ +N M A V+P+ T + +L AC G+ L+ ++ R+ + +
Sbjct: 316 GYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIE 375
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 301
+ +G ++D+ + G+++ A + M + D W +L++ G+ A
Sbjct: 376 PKIEHYG------CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Query: 302 LM 303
L+
Sbjct: 430 LV 431
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 257/502 (51%), Gaps = 3/502 (0%)
Query: 165 EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVL 223
++ + Q++ D ++ V+ + I NR EA ++ + + + +T +++
Sbjct: 71 KESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALV 130
Query: 224 PACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV 283
AC LK++ + V+ + GF + N +L M+VKCG + +A L +E+ E ++
Sbjct: 131 EACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLY 190
Query: 284 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 343
++ ++I+G++ G+ A L ++M E + A +L A GS+ GK LH A
Sbjct: 191 SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCA 250
Query: 344 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
++ + V LIDMY+KC + F +K T WN +++G+ + EA+
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEAL 310
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 463
L M V D T + ++ LA L+ H LIR+GF + + LVD Y
Sbjct: 311 CLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFY 370
Query: 464 SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQIT 523
SK G + A ++F+ +P Y HG G AV LF +M+ + V PN +T
Sbjct: 371 SKWGRVDTARYVFDKLP--RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVT 428
Query: 524 FTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
F +VL AC+++GL ++G +F M + H I P HY C+I+LLGR G L++A IR
Sbjct: 429 FLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRA 488
Query: 584 PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAE 643
P+K +W ALL AC EN+ELG V A + + PE GNYV++ N+Y ++G+ +A
Sbjct: 489 PLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAA 548
Query: 644 NVRDMVNVVGLRKLPAQSLVEV 665
V + + GL +PA + VEV
Sbjct: 549 GVLETLESKGLSMMPACTWVEV 570
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 160/313 (51%)
Query: 117 TYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM 176
TY +++AC L + V+G GF+ + ++ N +L M++ G A+ +FD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 177 KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR 236
E+ + S+ ++I+G+ EA ++ M + + + T +L A L ++ +G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
++H + G N V ++DMY KCG +++A M E V W +I GY L+G
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
+ AL L M GV + +++ ++ L K HA IR ESE++ T
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
AL+D Y+K + + VF K +K WNAL+ G+ ++ +A++LF++M+ +V P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAP 424
Query: 417 DNATFNSLLPAYA 429
++ TF ++L A A
Sbjct: 425 NHVTFLAVLSACA 437
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 144/262 (54%), Gaps = 1/262 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R+L+S+ +++ +V G +A LF +M+ L+ + T+ ++++A + L
Sbjct: 180 LFDEIPERNLYSYYSIISGFVNFGNYVEAFELF-KMMWEELSDCETHTFAVMLRASAGLG 238
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G +H K G +TFV L+ MY G+ E A+ F+ M E+T V+WN +I
Sbjct: 239 SIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIA 298
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + +EEAL + M D+GV D T+ ++ L +EL ++ HA + GF
Sbjct: 299 GYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFES 358
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+V A++D Y K G++ A ++ +++ ++++W L+ GY +G A+ L M+
Sbjct: 359 EIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI 418
Query: 310 LEGVKPNLVSVASLLSACGSFG 331
V PN V+ ++LSAC G
Sbjct: 419 AANVAPNHVTFLAVLSACAYSG 440
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 112/223 (50%), Gaps = 3/223 (1%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F+ +P+++ +WN ++ Y G +AL L +M SG+++ D FT I+I+ + L+
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSI-DQFTLSIMIRISTKLAK 340
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
L++ H + GF+ + +L+ Y G + A+ VFD + + ++SWN ++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-KGFWG 249
Y + R +A++++ +M+ A V P+ T ++VL AC E G E+ + E G
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 291
+ M+++ + G + EA +T V W L+N
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 137/451 (30%), Positives = 251/451 (55%), Gaps = 6/451 (1%)
Query: 222 VLPACGLLKNVELGREVHALV-KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
+L AC K++ G ++ +L+ N + + ++ ++ C ++ A + +++ ++
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 281 DVVT---WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
++T W + GY NG R AL++ ML ++P S++ L AC L G+
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 397
+HA +++K + + +V L+ +Y + + + KVF S++ WN+L+S
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 457
V E LF++M + + AT ++LPA + +A L IH +++S + + +
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 517
L+D+Y KCG + Y+ +F++ + Y +G+ E ++LF M++SGV
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDV--MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 518 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 577
P+ ITF ++L CS GL + GLSLF+ M + ++ P ++HY C++D+LGRAG++ +A
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAV 494
Query: 578 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG 637
+I TMP KP+ ++WG+LL +C H NV +GE+AA+ F LEP N GNYV+++N+YA
Sbjct: 495 KVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAK 554
Query: 638 RWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
W + + +R+M+ G++K S V+V+ +
Sbjct: 555 MWDNVDKIREMMKQRGVKKEAGCSWVQVKDK 585
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 174/332 (52%), Gaps = 16/332 (4%)
Query: 70 LFDTLPQRSLFS---WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 126
+FD + SL + W M Y + G P DAL ++V+M+ S + P NF+ + +KAC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIE-PGNFSISVALKACV 247
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
DL L +G G+H K +D V N LL +YM +G + A+ VFD M E+ VV+WN+
Sbjct: 248 DLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNS 307
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
+I+ + R E ++ +M + + AT+ ++LPAC + + G+E+HA + +
Sbjct: 308 LISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK 367
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
++ + N+++DMY KCG+++ + + + M D+ +W ++N Y +NG+ + L
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA------LID 360
M+ GV P+ ++ +LLS C G YG L +++++E V A L+D
Sbjct: 428 WMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF-----ERMKTEFRVSPALEHYACLVD 482
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAP-WNALLS 391
+ + + KV K +A W +LL+
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 193/671 (28%), Positives = 308/671 (45%), Gaps = 127/671 (18%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDL 128
LF+ +P+R++ + N M+ YV+ R ++A LF EM P N ++ +++ A D
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-------PKNVVSWTVMLTALCDD 151
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ V + F + + N+L+ + G+ E+A+ VFD M + VVSWN MI
Sbjct: 152 GRSEDAVEL----FDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 207
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY N+ EEA ++ M +
Sbjct: 208 KGYIENDGMEEAKLLFGDMSEK-------------------------------------- 229
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N+V +M+ Y + G ++EA+ L EM E ++V+WT +I+G+ N R ALML M
Sbjct: 230 -NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 309 L--LEGVKPNLVSVASLLSACGSFGS--LNYGKCLHAWAIRQKLES---EVIVETALIDM 361
++ V PN ++ SL ACG G G+ LHA I E+ + + +L+ M
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 362 YA-------------------KCNC--------GNL--SYKVFMKT-SKKRTAPWNALLS 391
YA CN G+L + +F + S W +++
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 392 GFIHNSLVREAIQLFKQMLVKD-------------------------------VQPDNAT 420
G++ V A LF+++ KD ++P N+T
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNST 468
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNI 478
++ LL + ++L Q +IHC + ++ Y L + + LV +Y+KCG++ A+ IF
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF-- 526
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
+ HG + A++LF +M+ SG +PN +TF VL ACSH+GL+
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
GL LFK M + + I P +DHY +IDLLGRAG+L +A I +P P+H V+GALLG
Sbjct: 587 RGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGL 646
Query: 599 C----VSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGL 654
C + + E AA EL+P N +V L N+YA +GR + +R + + G+
Sbjct: 647 CGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGV 706
Query: 655 RKLPAQSLVEV 665
+K P S V V
Sbjct: 707 KKTPGCSWVVV 717
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 206/490 (42%), Gaps = 85/490 (17%)
Query: 228 LLKNVELGREVHAL-----VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 282
+L+ + G VHA + ++G +V ++L Y K G + EA L M E ++
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI 108
Query: 283 VTWTTLINGYILNGDARSALMLCR----------VMLL----------------EGVKPN 316
VT ++ GY+ A L R VML E + N
Sbjct: 109 VTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 317 LVSVASLLSACGSFGSLNYGKCLH---------AW--AIRQKLESEVIVETALI--DM-- 361
+VS +L++ G + K + +W I+ +E++ + E L+ DM
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE 228
Query: 362 ----------YAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
Y C G++ +Y++F + ++ W A++SGF N L REA+ LF +M
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 410 L--VKDVQPDNATFNSLLPAYAVLA-DLKQ-AMNIHCYLIRSGFL---YRLEVASILVDI 462
V V P+ T SL A L + ++ +H +I +G+ + +A LV +
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 463 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 522
Y+ G + A + N Y K+G E A +LF + V+S +++
Sbjct: 349 YASSGLIASAQSLLN----ESFDLQSCNIIINRYLKNGDLERAETLFER-VKS--LHDKV 401
Query: 523 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 582
++TS++ AG V LF+ + + + +T +I L + +A +L+
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFAEAASLLSD 456
Query: 583 M---PIKPNHAVWGALLGACVSHENVELGE----VAARWTFELEPENTGNYVLLANLYAA 635
M +KP ++ + LL + + N++ G+ V A+ T +P+ L++ +YA
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS-MYAK 515
Query: 636 VGRWRDAENV 645
G DA +
Sbjct: 516 CGAIEDAYEI 525
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 164/534 (30%), Positives = 266/534 (49%), Gaps = 47/534 (8%)
Query: 169 AQLVF-DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 227
A+L+F + V +NTMI+ ++ E +Y+ M+ V PD T + ++ A
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS 144
Query: 228 LLKNVELGREVHALVKEKGFW--GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTW 285
L V +++H + G GN + N+++ Y++ G A + M DV ++
Sbjct: 145 FLSEV---KQIHCHIIVSGCLSLGNYLW-NSLVKFYMELGNFGVAEKVFARMPHPDVSSF 200
Query: 286 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
+I GY G + AL L M+ +G++P+ +V SLL CG + GK +H W R
Sbjct: 201 NVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIER 260
Query: 346 QK--LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH-------- 395
+ S +I+ AL+DMY KC L+ + F KK WN ++ GF+
Sbjct: 261 RGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQ 320
Query: 396 --------------NSLV----------REAIQLFKQM-LVKDVQPDNATFNSLLPAYAV 430
NSL+ R +LF +M +V+ V+PD T SL+ A
Sbjct: 321 AVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
+L +H +IR ++S L+D+Y KCG + A +F
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSM 440
Query: 491 XXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQ 550
+ HG+G+ A+ LF +M + GV PN +T +VL ACSH+GLV+EGL +F M +
Sbjct: 441 ITGLAF--HGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Query: 551 HQIIPLVDHYTCIIDLLGRAGQLNDAYNLI-RTMPIKPNHAVWGALLGACVSHENVELGE 609
P +HY ++DLL RAG++ +A +++ + MP++P+ ++WG++L AC E++E E
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Query: 610 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
+A +LEPE G YVLL+N+YA VGRW ++ R+ + G++K S V
Sbjct: 559 LALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 226/438 (51%), Gaps = 43/438 (9%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P ++F +NTM+ ++ L+ MI ++ PD T+ ++KA S LS +
Sbjct: 96 PNPNVFVYNTMISAVSS--SKNECFGLYSSMIRHRVS-PDRQTFLYLMKASSFLSEVKQ- 151
Query: 135 VGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
+H +G L ++ NSL+ YM G A+ VF M V S+N MI GY +
Sbjct: 152 --IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG--FWGNM 251
+ EAL++Y +M+ G+EPD TV+S+L CG L ++ LG+ VH ++ +G + N+
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 252 VVRNAMLDMYVKC-------------------------------GQMKEAWWLANEMDET 280
++ NA+LDMY KC G M+ A + ++M +
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 281 DVVTWTTLINGYILNG-DARSALMLCRVM-LLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
D+V+W +L+ GY G D R+ L M ++E VKP+ V++ SL+S + G L++G+
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+H IR +L+ + + +ALIDMY KC ++ VF ++K A W ++++G +
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVAS 457
++A+QLF +M + V P+N T ++L A + +++ +++ ++ + GF E
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 458 ILVDIYSKCGSLGYAHHI 475
LVD+ + G + A I
Sbjct: 510 SLVDLLCRAGRVEEAKDI 527
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 160/356 (44%), Gaps = 36/356 (10%)
Query: 16 ESLLRKFSASNSLSETKKLHAFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTLP 75
++ L AS+ LSE K++H I +F +P
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
+ S+N M+ Y + G +AL L+ +M+ G+ PD +T ++ C LS + +G
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE-PDEYTVLSLLVCCGHLSDIRLGK 252
Query: 136 GVHGMTFKAG--FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
GVHG + G + + + N+LL MY E A+ FD MK++ + SWNTM+ G+ R
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 194 NNRAEEALRVYNRM---------------------------------MDAGVEPDCATVV 220
E A V+++M + V+PD T+V
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 221 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
S++ + GR VH LV G+ + +A++DMY KCG ++ A+ + E
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
DV WT++I G +G+ + AL L M EGV PN V++ ++L+AC G + G
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 2/203 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDAL-NLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+FD +P+R L SWN+++ Y + G + LF EM PD T +I ++
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANN 381
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
L G VHG+ + D F+ ++L+ MY G E+A +VF E+ V W +MI
Sbjct: 382 GELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMI 441
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GF 247
G + ++AL+++ RM + GV P+ T+++VL AC VE G V +K+K GF
Sbjct: 442 TGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGF 501
Query: 248 WGNMVVRNAMLDMYVKCGQMKEA 270
+++D+ + G+++EA
Sbjct: 502 DPETEHYGSLVDLLCRAGRVEEA 524
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 239/483 (49%), Gaps = 41/483 (8%)
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW--WLA 274
++++S L C L + +++H V KG + + ++ K G + + +
Sbjct: 50 SSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
+ + WT +I GY + G A+ + M E + P + ++LL ACG+ LN
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSK-------------- 380
G+ HA R + V V +IDMY KC + + KVF + +
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 381 -----------------KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
K W A+++GF N+ +EA++ F +M ++ D T
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ A A L K A +SG+ + + S L+D+YSKCG++ A ++F + +
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--MSM 344
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEG 540
HG + A+ LF+ MV Q+ ++PN +TF L ACSH+GLVD+G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
+F M + + P DHYTC++DLLGR G+L +A LI+TM ++P+ VWGALLGAC
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 601 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQ 660
H N E+ E+AA FELEP+ GNY+LL+N+YA+ G W VR ++ GL+K PA
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAV 524
Query: 661 SLV 663
S V
Sbjct: 525 SWV 527
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 150/330 (45%), Gaps = 42/330 (12%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAG--EKEQAQLVFDLMKEQTVVSWNTMINGYFRN 194
+HG + G D ++ L+ G A+ V + ++ + W +I GY
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 195 NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWGNMVV 253
+ +EA+ +Y M + P T ++L ACG +K++ LGR+ HA + +GF + V
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC-FVYV 186
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI------------------------ 289
N M+DMYVKC + A + +EM E DV++WT LI
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 290 -------NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 342
G+ N + AL M G++ + V+VA +SAC G+ Y A
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD--RAV 304
Query: 343 AIRQKL----ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
I QK V++ +ALIDMY+KC + VFM + K +++++ G +
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 399 VREAIQLFKQMLVK-DVQPDNATFNSLLPA 427
+EA+ LF M+ + +++P+ TF L A
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 146/296 (49%), Gaps = 37/296 (12%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
R+ F W ++R Y G+ +A+ ++ M +T P +FT+ ++KAC + L++G
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEIT-PVSFTFSALLKACGTMKDLNLGRQ 170
Query: 137 VHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN---------- 185
H TF+ GF +V N+++ MY+ + A+ VFD M E+ V+SW
Sbjct: 171 FHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 186 ---------------------TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLP 224
M+ G+ +N + +EAL ++RM +G+ D TV +
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 225 ACGLLKNVELGREVHALVKEKGF--WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 282
AC L + + ++ G+ ++V+ +A++DMY KCG ++EA + M+ +V
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
Query: 283 VTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGK 337
T++++I G +G A+ AL L M+ + +KPN V+ L AC G ++ G+
Sbjct: 350 FTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL- 128
LF++LP + + +W M+ + Q +P +AL F M SG+ D T I AC+ L
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR-ADEVTVAGYISACAQLG 295
Query: 129 --SFLDMGVGVHGMTFKAGFDLDTFV--QNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 184
+ D V + K+G+ V ++L+ MY G E+A VF M + V ++
Sbjct: 296 ASKYADRAVQI---AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 185 NTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREV-HALV 242
++MI G + RA+EAL +++ M+ ++P+ T V L AC V+ GR+V ++
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
+ G M+D+ + G+++EA L M
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 156/583 (26%), Positives = 283/583 (48%), Gaps = 9/583 (1%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD + R + ++N ++ + G A+ L+ EM+ GL + T+P ++ CSD F
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAS-TFPSVLSVCSDELF 127
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
G+ VH GF + FV+++L+ +Y + A +FD M ++ + N ++
Sbjct: 128 CREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRC 187
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW-- 248
+ + ++ VY RM GV + T ++ C + V G+++H+LV + G W
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG-WNI 246
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N+ V N ++D Y CG + + N + E DV++W ++++ G +L L M
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCNC 367
G +P++ S L+ C + GK +H + ++ + S + V++ALIDMY KCN
Sbjct: 307 QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG 366
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
S ++ N+L++ +H + ++ I++F M+ + D T +++L A
Sbjct: 367 IENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
Query: 428 YAVL--ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
++ L +HC I+SG+ + V+ L+D Y+K G + +F+ L
Sbjct: 427 LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD--ELDTPN 484
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
Y ++G G V + +M + + P+++T SVL CSH+GLV+EG +F
Sbjct: 485 IFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFD 544
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
+ ++ I P Y C++DLLGRAG + A L+ + W +LL +C H N
Sbjct: 545 SLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNE 604
Query: 606 ELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDM 648
+G AA LEPEN Y+ ++ Y +G + + +R++
Sbjct: 605 TIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 207/497 (41%), Gaps = 39/497 (7%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 210
+ N + + +G A FD M + VV++N +I+G R + A+ +Y M+
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 270
G+ +T SVL C G +VH V GF NM VR+A++ +Y + A
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 271 WWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF 330
L +EM + ++ L+ + G+++ + M LEGV N ++ ++ C
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 331 GSLNYGKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 389
+ GK LH+ ++ S + V L+D Y+ C + S + F +K WN++
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSI 286
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
+S V +++ LF +M +P F S L + +D++ IHCY+++ GF
Sbjct: 287 VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 450 -LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
+ L V S L+D+Y KC + + ++ +P + G + + +
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHC--GITKDIIEM 404
Query: 509 FNQMVQSGVQPNQITFTSV-----------LHACS--HAGLVDEG--------LSLFKFM 547
F M+ G +++T ++V LH+C+ H + G SL
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 548 LKQHQ-----------IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWG 593
K Q P + T II+ R G D ++R M + P+
Sbjct: 465 TKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTIL 524
Query: 594 ALLGACVSHENVELGEV 610
++L C VE GE+
Sbjct: 525 SVLSGCSHSGLVEEGEL 541
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 158/563 (28%), Positives = 270/563 (47%), Gaps = 42/563 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P +SL +WN MM + G + + F E++ G +L ++ ++ ++K S +
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKGVSCVK 229
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
LD+ +H K G D + V NSL++ Y G A+ +F +VSWN +I
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
++ +AL+++ M + G P+ T VSVL L++ + GR++H ++ + G
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+V+ NA++D Y KCG ++++ + + + ++V W L++GY N D L L ML
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQML 408
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G +P + ++ L +C + + LH+ +R E V ++L+ YAK N
Sbjct: 409 QMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 370 --------------------------------LSYKVFMKTSKKRTAPWNALLSGFIHNS 397
S K+ + T WN ++ +
Sbjct: 465 DALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSD 524
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-LYRLEVA 456
E I+LFK ML +++PD TF S+L + L DL +IH + ++ F V
Sbjct: 525 YHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVC 584
Query: 457 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG 516
++L+D+Y KCGS+ +F G HG+G+ A+ F + + G
Sbjct: 585 NVLIDMYGKCGSIRSVMKVFE--ETREKNLITWTALISCLGIHGYGQEALEKFKETLSLG 642
Query: 517 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA 576
+P++++F S+L AC H G+V EG+ LF+ M K + + P +DHY C +DLL R G L +A
Sbjct: 643 FKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Query: 577 YNLIRTMPIKPNHAVWGALLGAC 599
+LIR MP + VW L C
Sbjct: 702 EHLIREMPFPADAPVWRTFLDGC 724
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 250/564 (44%), Gaps = 52/564 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R+ S+NT+++ Y + G A +F EM + G LP+ T ++ +C+ L
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGY-LPNQSTVSGLL-SCASLD 128
Query: 130 FLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ G +HG++ K G F D FV LL +Y E A+ VF+ M +++ +WN M+
Sbjct: 129 -VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ +E + + ++ G ++ + VL +K++++ +++H +KG
Sbjct: 188 SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ V N+++ Y KCG A + + D+V+W +I + + AL L M
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
G PN + S+L L+ G+ +H I+ E+ +++ ALID YAK CG
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAK--CG 365
Query: 369 NL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
NL S F K WNALLSG+ N + LF QML +P TF++ L
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 427 AYAVLADLKQAMNIHCYLIRSGF-----------------------LYRLEVAS------ 457
+ V +L+Q +H ++R G+ L L+ AS
Sbjct: 425 SCCV-TELQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 458 ---ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
I+ IYS+ G Y + I L + + E + LF M+Q
Sbjct: 481 PLNIVAGIYSRRGQ--YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC--IIDLLGRAGQ 572
S ++P++ TF S+L CS + G S+ + K D + C +ID+ G+ G
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD--FSCADTFVCNVLIDMYGKCGS 596
Query: 573 LNDAYNLIRTMPIKPNHAVWGALL 596
+ + K N W AL+
Sbjct: 597 IRSVMKVFEETREK-NLITWTALI 619
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 214/490 (43%), Gaps = 45/490 (9%)
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDA 210
+V N+++++Y GE A VFD M E+ VS+NT+I GY + ++A V++ M
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG-FWGNMVVRNAMLDMYVKCGQMKE 269
G P+ +TV +L L +V G ++H L + G F + V +L +Y + ++
Sbjct: 110 GYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 270 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 329
A + +M + TW +++ G + + R ++ G S +L
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNAL 389
L+ K LH A ++ L+ E+ V +LI Y KC +++ ++F WNA+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
+ + +A++LF M P+ T+ S+L +++ L IH LI++G
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 509
+ + + L+D Y+KCG+L + F+ I Y G + +SLF
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYI--RDKNIVCWNALLSGYANK-DGPICLSLF 404
Query: 510 NQMVQSGVQPNQITFTSVLHAC-----------------------------SHAG--LVD 538
QM+Q G +P + TF++ L +C S+A L++
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMN 464
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+ L L + ++PL + + R GQ +++ LI T+ +P+ W + A
Sbjct: 465 DALLLLDWASGPTSVVPL----NIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAA 519
Query: 599 CVS---HENV 605
C HE V
Sbjct: 520 CSRSDYHEEV 529
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 7/216 (3%)
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIR--QKLESEVIVETALIDMYAKCNCGNLSYKVFMK 377
V SLL+ C S K LHA +I L V V +I +Y K +L+ KVF +
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 378 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
++ +N ++ G+ V +A +F +M P+ +T + LL ++ D++
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAG 132
Query: 438 MNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
+H ++ G F+ V + L+ +Y + L A +F +P
Sbjct: 133 TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL-- 190
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
G G + + F ++V+ G + +F VL S
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 261/549 (47%), Gaps = 48/549 (8%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLL---AMYMNAGEKEQAQLVFDLMK 177
++ +C +L L +HG+ K G D D++ L+ A+ ++ +L+
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL-CFP 66
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGR 236
E +NT++ GY ++ ++ V+ MM G V PD + V+ A +++ G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 237 EVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
++H + G ++ V ++ MY CG ++ A + +EM + ++V W +I
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
D A + ML+ V +A + A G L K
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKA----GELESAK------------------- 223
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
++F + + W+ ++ G HN E+ F+++ + P
Sbjct: 224 ----------------RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+ + +L A + + +H ++ ++G+ + + V + L+D+YS+CG++ A +F
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVF 327
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ HG GE AV LFN+M GV P+ I+F S+LHACSHAGL
Sbjct: 328 EGMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
++EG F M + + I P ++HY C++DL GR+G+L AY+ I MPI P VW LL
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 597 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
GAC SH N+EL E + EL+P N+G+ VLL+N YA G+W+D ++R + V ++K
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 657 LPAQSLVEV 665
A SLVEV
Sbjct: 507 TTAWSLVEV 515
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 193/410 (47%), Gaps = 41/410 (10%)
Query: 74 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 133
P+ F +NT++R Y + PH+++ +FVEM+ G PD+F++ +IKA + L
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G +H K G + FV +L+ MY G E A+ VFD M + +V+WN +I FR
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
N A ++++M LV+ W
Sbjct: 185 GNDVAGAREIFDKM---------------------------------LVRNHTSW----- 206
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
N ML Y+K G+++ A + +EM D V+W+T+I G NG + + R + G+
Sbjct: 207 -NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
PN VS+ +LSAC GS +GK LH + + V V ALIDMY++C ++
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 374 VFMKTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
VF +KR W ++++G + EA++LF +M V PD +F SLL A +
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 433 DLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+++ + + R + +E +VD+Y + G L A+ +P+
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPI 435
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 16/237 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +P R SW+TM+ G +++ F E+ +G++ P+ + ++ ACS
Sbjct: 225 IFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSG 283
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ-TVVSWNTMI 188
+ G +HG KAG+ V N+L+ MY G A+LVF+ M+E+ +VSW +MI
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG-------REVHAL 241
G + + EEA+R++N M GV PD + +S+L AC +E G + V+ +
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
E +G MV D+Y + G++++A+ +M + W TL+ +G+
Sbjct: 404 EPEIEHYGCMV------DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 212/419 (50%), Gaps = 33/419 (7%)
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
D D W +I G+ + + +L+L + ML N + SLL AC + +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 338 CLHAWAIRQKLESEVIVETALIDMYA-------------------------------KCN 366
+HA + E++V +LI+ YA K
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+++ +F K ++K W ++SG++ + +EA+QLF +M DV+PDN + + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
A A L L+Q IH YL ++ + +L+D+Y+KCG + A +F I
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--KKSV 313
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
Y HGHG A+S F +M + G++PN ITFT+VL ACS+ GLV+EG +F
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
M + + + P ++HY CI+DLLGRAG L++A I+ MP+KPN +WGALL AC H+N+E
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Query: 607 LGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
LGE ++P + G YV AN++A +W A R ++ G+ K+P S + +
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 151/300 (50%), Gaps = 34/300 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDL 128
+FD + F WN M+R + P +L L+ M+ S + P N +T+P ++KACS+L
Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCS--SAPHNAYTFPSLLKACSNL 128
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
S + +H K G++ D + NSL+ Y G + A L+FD + E VSWN++I
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 189 NGYFRNNRAE-------------------------------EALRVYNRMMDAGVEPDCA 217
GY + + + EAL++++ M ++ VEPD
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
++ + L AC L +E G+ +H+ + + + V+ ++DMY KCG+M+EA + +
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+ V WT LI+GY +G R A+ M G+KPN+++ ++L+AC G + GK
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 35/380 (9%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKE---QAQLVFDLMKEQTVVSWNTMINGYFR 193
+H K G D++ L+ +++ + AQ+VFD WN MI G+
Sbjct: 33 IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSC 92
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
++ E +L +Y RM+ + + T S+L AC L E ++HA + + G+ ++
Sbjct: 93 SDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYA 152
Query: 254 RNAMLDMY-------------------------------VKCGQMKEAWWLANEMDETDV 282
N++++ Y VK G+M A L +M E +
Sbjct: 153 VNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 283 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 342
++WTT+I+GY+ + AL L M V+P+ VS+A+ LSAC G+L GK +H++
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 343 AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA 402
+ ++ + ++ LIDMYAKC + +VF KK W AL+SG+ ++ REA
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA 332
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVD 461
I F +M ++P+ TF ++L A + +++ I + R L +E +VD
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVD 392
Query: 462 IYSKCGSLGYAHHIFNIIPL 481
+ + G L A +PL
Sbjct: 393 LLGRAGLLDEAKRFIQEMPL 412
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF + +++ SW TM+ YVQ +AL LF EM +S + PDN + + AC+ L
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE-PDNVSLANALSACAQLG 261
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G +H K +D+ + L+ MY GE E+A VF +K+++V +W +I+
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFW 248
GY + EA+ + M G++P+ T +VL AC VE G+ + +++ ++
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 291
+ ++D+ + G + EA EM + + V W L+
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 244/506 (48%), Gaps = 47/506 (9%)
Query: 164 GEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVL 223
G + A +FD + + V N ++ G ++ + E+ + +Y M GV PD T VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 224 PACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV 283
AC L+ G H V GF N V+NA++ + CG + A L ++ + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 284 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 343
W+++ +GY G A+ L F + Y K AW
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRL-------------------------FDEMPY-KDQVAWN 213
Query: 344 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
+ +I KC + + ++F + ++K WNA++SG+++ +EA+
Sbjct: 214 V-------------MITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL-----IRSGFLYRLEVASI 458
+FK+M PD T SLL A AVL DL+ +H Y+ + S + +
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 459 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ 518
L+D+Y+KCGS+ A +F + H E ++ +F +M + V
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH---HAEGSIEMFEEMQRLKVW 377
Query: 519 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 578
PN++TF V+ ACSH+G VDEG F M + I P + HY C++D+LGRAGQL +A+
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 579 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGR 638
+ +M I+PN VW LLGAC + NVELG+ A + + +G+YVLL+N+YA+ G+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 639 WRDAENVRDMVNVVGLRKLPAQSLVE 664
W + VR M + ++K SL+E
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 83/477 (17%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+ + N ++R Q +P ++L+ EM G++ PD +T+ ++KACS L
Sbjct: 68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVS-PDRYTFTFVLKACSKLE 126
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G HG + GF L+ +V+N+L+ + N G+ A +FD + V+W++M +
Sbjct: 127 WRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTS 186
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + + +EA+R+++ M D ++ C K ++ RE+ EK
Sbjct: 187 GYAKRGKIDEAMRLFDEM----PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK---- 238
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++V NAM+ YV CG KEA + EM +
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDA----------------------------- 269
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVET----ALIDMYAK 364
G P++V++ SLLSAC G L GK LH + + + S + V T ALIDMYAK
Sbjct: 270 --GEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAK 327
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGF-IHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
C + + +VF + + WN L+ G +H++ +I++F++M V P+ TF
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA--EGSIEMFEEMQRLKVWPNEVTFIG 385
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
++ A + H + G Y S++ D+Y+ ++ + + +++
Sbjct: 386 VILACS-----------HSGRVDEGRKY----FSLMRDMYNIEPNIKHYGCMVDML---- 426
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 540
G+ G E A M ++PN I + ++L AC G V+ G
Sbjct: 427 -------------GRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIYGNVELG 467
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 22/312 (7%)
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNALLSGFI 394
K +HA + L S + V LI + G L Y K+F + K + N +L G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+ + + L+ +M + V PD TF +L A + L H ++R GF+
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 455 VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ 514
V + L+ ++ CG LG A +F+ Y K G + A+ LF++M
Sbjct: 149 VKNALILFHANCGDLGIASELFD--DSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY 206
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
+Q+ + ++ C +D LF ++ + + +I G
Sbjct: 207 K----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMISGYVNCGYPK 257
Query: 575 DAYNLIRTMPI---KPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYV---- 627
+A + + M P+ +LL AC ++E G+ + E ++ YV
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 628 --LLANLYAAVG 637
L ++YA G
Sbjct: 318 WNALIDMYAKCG 329
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 198/333 (59%), Gaps = 7/333 (2%)
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS--YKVFMKTSKKRTAPWNALLSGF 393
G+ +H+ IR S + V+ +L+ +YA NCG+++ YKVF K +K WN++++GF
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 453
N EA+ L+ +M K ++PD T SLL A A + L +H Y+I+ G L
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 454 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 513
+++L+D+Y++CG + A +F+ + +G G+ A+ LF M
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFD--EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 514 QS-GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 572
+ G+ P +ITF +L+ACSH G+V EG F+ M ++++I P ++H+ C++DLL RAGQ
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 573 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL 632
+ AY I++MP++PN +W LLGAC H + +L E A +LEP ++G+YVLL+N+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 633 YAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
YA+ RW D + +R + G++K+P SLVEV
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 123/205 (60%), Gaps = 1/205 (0%)
Query: 133 MGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYF 192
+G +H + ++GF +VQNSLL +Y N G+ A VFD M E+ +V+WN++ING+
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
N + EEAL +Y M G++PD T+VS+L AC + + LG+ VH + + G N+
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLE 311
N +LD+Y +CG+++EA L +EM + + V+WT+LI G +NG + A+ L + M E
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 312 GVKPNLVSVASLLSACGSFGSLNYG 336
G+ P ++ +L AC G + G
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEG 210
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
+ +V LG +H++V GF + V+N++L +Y CG + A+ + ++M E D+V W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
ING+ NG AL L M +G+KP+ ++ SLLSAC G+L GK +H + I+ L
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+ L+D+YA+C + +F + K + W +L+ G N +EAI+LFK
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY------------RLEVA 456
M + LLP + A + HC +++ GF Y R+E
Sbjct: 181 M---------ESTEGLLPCEITFVGILYACS-HCGMVKEGFEYFRRMREEYKIEPRIEHF 230
Query: 457 SILVDIYSKCGSLGYAHHIFNIIPL 481
+VD+ ++ G + A+ +P+
Sbjct: 231 GCMVDLLARAGQVKKAYEYIKSMPM 255
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 134/259 (51%), Gaps = 6/259 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P++ L +WN+++ + + G+P +AL L+ EM G+ PD FT ++ AC+ +
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK-PDGFTIVSLLSACAKIG 103
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G VH K G + N LL +Y G E+A+ +FD M ++ VSW ++I
Sbjct: 104 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 163
Query: 190 GYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G N +EA+ ++ M G+ P T V +L AC V+ G E ++E+
Sbjct: 164 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 249 GNMVVR-NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCR 306
+ M+D+ + GQ+K+A+ M + +VV W TL+ ++GD+ A R
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA-EFAR 282
Query: 307 VMLLEGVKPNLVSVASLLS 325
+ +L+ ++PN LLS
Sbjct: 283 IQILQ-LEPNHSGDYVLLS 300
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 215/393 (54%), Gaps = 3/393 (0%)
Query: 277 MDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
+D+ + T+I GY+ AL M+ G +P+ + LL AC S+ G
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 396
K +H + LE++V V+ +LI+MY +C LS VF K K A W++++S
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGM 211
Query: 397 SLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEV 455
+ E + LF+ M + +++ + + S L A A L M+IH +L+R+ + V
Sbjct: 212 GMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIV 271
Query: 456 ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS 515
+ LVD+Y KCG L A HIF + HG GE A+ +F++M++
Sbjct: 272 QTSLVDMYVKCGCLDKALHIFQ--KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 516 GVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLND 575
G++P+ + + SVL+ACSH+GLV EG +F MLK+ ++ P +HY C++DLLGRAG L +
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 576 AYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 635
A I+++PI+ N +W L C +N+ELG++AA+ +L N G+Y+L++NLY+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 636 VGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
W D R + + GL++ P S+VE++ +
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGK 482
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 166/297 (55%), Gaps = 3/297 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + F +NTM+R YV + +AL + EM+ G PDNFTYP ++KAC+ L
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRG-NEPDNFTYPCLLKACTRLK 146
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +HG FK G + D FVQNSL+ MY GE E + VF+ ++ +T SW++M++
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206
Query: 190 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
E L ++ M + ++ + + +VS L AC + LG +H +
Sbjct: 207 ARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISE 266
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N++V+ +++DMYVKCG + +A + +M++ + +T++ +I+G L+G+ SAL + M
Sbjct: 267 LNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM 326
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAK 364
+ EG++P+ V S+L+AC G + G+ + A +++ K+E L+D+ +
Sbjct: 327 IKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 166/315 (52%), Gaps = 2/315 (0%)
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
A +F + + +NTMI GY EEAL YN MM G EPD T +L AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
LK++ G+++H V + G ++ V+N++++MY +CG+M+ + + +++ +W+++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 289 INGYILNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
++ G L+L R M E +K + S L AC + G+LN G +H + +R
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
E +IV+T+L+DMY KC C + + +F K K+ ++A++SG + A+++F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKC 466
+M+ + ++PD+ + S+L A + +K+ + +++ G + E LVD+ +
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 467 GSLGYAHHIFNIIPL 481
G L A IP+
Sbjct: 385 GLLEEALETIQSIPI 399
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 272/591 (46%), Gaps = 79/591 (13%)
Query: 155 SLLAMYMNAGEKEQAQLVFD---LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 211
+L+++Y G A+ VF+ L+ + WN+++ + E AL +Y M G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 212 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 271
+ D + +L AC L L R H V + G N+ V N +L +Y K G+M +A+
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 272 WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA---CG 328
L EM + ++W +I G+ D SA+ + M E KP+ V+ S+LS CG
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 329 SFG--------------------------------SLNYGKCLHAWAIRQKLESEVIVET 356
F +L+ + +H + I+ E +
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF---------- 406
ALI +Y K + +F + K WN+L++ F+ + EA+ LF
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 407 -----------------------------KQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
+QM V ++ T +L A L L
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLG 453
Query: 438 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
IH ++IR+ + V + LV++Y+KCG L +F I YG
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI--RDKDLISWNSIIKGYG 511
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
HG E A+S+F++M+ SG P+ I +VL ACSHAGLV++G +F M K+ + P
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 617
+HY CI+DLLGR G L +A +++ MP++P V GALL +C H+NV++ E A
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
Query: 618 LEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
LEPE TG+Y+LL+N+Y+A GRW ++ NVR + L+K+ S +EV+ +
Sbjct: 632 LEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKK 682
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 157/370 (42%), Gaps = 76/370 (20%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTY----------- 118
LF +P R+ SWN M++ + Q A+ +F E + PD T+
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF-EWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 119 ------------------------PIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQN 154
+ C++L L + VHG K GF+ +N
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 155 SLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYN--------- 205
+L+ +Y G+ + A+ +F ++ + + SWN++I + + +EAL +++
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 206 ------------------------------RMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+M + V + T+ +L C L + LG
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLG 453
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
RE+H V N++V+NA+++MY KCG + E + + + D+++W ++I GY ++
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMH 513
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIV 354
G A AL + M+ G P+ +++ ++LSAC G + G+ ++ + R LE +
Sbjct: 514 GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH 573
Query: 355 ETALIDMYAK 364
++D+ +
Sbjct: 574 YACIVDLLGR 583
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 154/365 (42%), Gaps = 47/365 (12%)
Query: 227 GLLKNVELGREVHA--LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE---TD 281
GL + R+VHA L+ + F + N ++ +Y + G + +A + + +D
Sbjct: 64 GLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSD 122
Query: 282 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
+ W +++ + +G +AL L R M G+ + + +L AC G + H
Sbjct: 123 LRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHT 182
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 401
I+ L+ + V L+ +Y K +Y +F++ + WN ++ GF
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPA--------------------------------YA 429
A+++F+ M ++ +PD T+ S+L ++
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 430 VLADLKQ---AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
V A+L+ A +H Y+I+ GF L + L+ +Y K G + A H+F I
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI--RNKGI 360
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQ----SGVQPNQITFTSVLHACSHAGLVDEGLS 542
+ G + A+SLF+++ + V+ N +T+TSV+ C+ G D+ L
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 543 LFKFM 547
F+ M
Sbjct: 421 YFRQM 425
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 262/503 (52%), Gaps = 16/503 (3%)
Query: 168 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 227
A +FD + ++ + S N+ ++ + R+ + L ++ ++ A + T VL AC
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 228 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 287
LL E GR+VHAL+ ++G + + A++DMY K G + ++ + ++E D+V+W
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
L++G++ NG + AL + M E V+ + +++S++ C S L GK +HA +
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLF 406
+ V++ TA+I Y+ N + KV+ + N+L+SG I N +EA L
Sbjct: 216 RDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM 274
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 466
+ +P+ +S L + +DL IHC +R+GF+ ++ + L+D+Y KC
Sbjct: 275 SRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKC 329
Query: 467 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ--SGVQPNQITF 524
G + A IF IP Y +G G A+ +F +M + SGV PN +TF
Sbjct: 330 GQIVQARTIFRAIP--SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
V+ AC+HAGLV EG F M ++++++P +HY C ID+L +AG+ + + L+ M
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMM 447
Query: 585 IKPNH----AVWGALLGACVSHENVELGE-VAARWTFELEPENTGNYVLLANLYAAVGRW 639
N A+W A+L AC + ++ GE VA R E PEN YVL++N YAA+G+W
Sbjct: 448 ENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKW 507
Query: 640 RDAENVRDMVNVVGLRKLPAQSL 662
E +R + GL K SL
Sbjct: 508 DVVEELRGKLKNKGLVKTAGHSL 530
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 208/408 (50%), Gaps = 23/408 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD LPQR L S N+ + +++ G P+D L LF++ IH + T+ ++ ACS LS
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQ-IHRASPDLSSHTFTPVLGACSLLS 98
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ + G VH + K G + T + +L+ MY G + VF+ ++E+ +VSWN +++
Sbjct: 99 YPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLS 158
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ RN + +EAL V+ M VE T+ SV+ C LK ++ G++VHA+V G
Sbjct: 159 GFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RD 217
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 308
+V+ AM+ Y G + EA + N ++ TD V +LI+G I N + + A +
Sbjct: 218 LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----L 272
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
L+ +PN+ ++S L+ C L GK +H A+R S+ + L+DMY KC
Sbjct: 273 LMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQI 332
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK--DVQPDNATFNSLLP 426
+ +F K W +++ + N +A+++F++M + V P++ TF ++
Sbjct: 333 VQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVIS 392
Query: 427 AYAVLADLKQAMNIHCYLIRSGFL---YRL----EVASILVDIYSKCG 467
A A +K+ C+ G + YRL E +DI SK G
Sbjct: 393 ACAHAGLVKEGK--ECF----GMMKEKYRLVPGTEHYVCFIDILSKAG 434
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 230/435 (52%), Gaps = 11/435 (2%)
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
+H L + GF + N ++ YVK ++ A L +EM E +VV+WT++I+GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 298 ARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
++AL + + M + V PN + AS+ AC + GK +HA L ++V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 357 ALIDMYAKCNCGNLSYKVF--MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM---LV 411
+L+DMY KCN + +VF M + W ++++ + N+ EAI+LF+ L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
D + + S++ A + L L+ H + R G+ VA+ L+D+Y+KCGSL
Sbjct: 231 SD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
A IF + + KHG GE AV LF++MV + PN +T VLHAC
Sbjct: 290 AEKIF--LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 532 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHA- 590
SH+GLV+EGL M +++ ++P HYTC++D+LGR G++++AY L +T+ +
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 591 -VWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMV 649
+WGALL A H VE+ A++ + + T Y+ L+N YA G W D+E++R +
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 650 NVVGLRKLPAQSLVE 664
G K A S +E
Sbjct: 468 KRSGNVKERACSWIE 482
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 196/422 (46%), Gaps = 34/422 (8%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+H +T K GF DTF N L+ Y+ E A+ +FD M E VVSW ++I+GY +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 197 AEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
+ AL ++ +M D V P+ T SV AC L +G+ +HA ++ G N+VV +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 256 AMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTLINGYILNGDARSALMLCRVM--LLE 311
+++DMY KC ++ A + + M +VV+WT++I Y N A+ L R L
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
+ N +AS++SAC S G L +GK H R ES +V T+L+DMYAKC + +
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
K+F++ + +++ + L A++LF +M+ + P+ T +L A +
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS-- 348
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVA------------SILVDIYSKCGSLGYAHHIFNII 479
H L+ G Y +A + +VD+ + G + A+ + I
Sbjct: 349 ---------HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI 399
Query: 480 PLXXXXXXXXXXXXXXYGK-HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
+ G+ HG E+ +++QS Q TS A S+A V
Sbjct: 400 EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ-----VTSAYIALSNAYAVS 454
Query: 539 EG 540
G
Sbjct: 455 GG 456
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 13/389 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD + + ++ SW +++ Y MG+P +AL++F +M P+ +T+ + KACS L+
Sbjct: 86 LFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALA 145
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM--KEQTVVSWNTM 187
+G +H +G + V +SL+ MY + E A+ VFD M + VVSW +M
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCAT---VVSVLPACGLLKNVELGREVHALVKE 244
I Y +N R EA+ ++ R +A + D A + SV+ AC L ++ G+ H LV
Sbjct: 206 ITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML 304
G+ N VV ++LDMY KCG + A + + V+++T++I +G +A+ L
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKL 324
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYA 363
M+ + PN V++ +L AC G +N G + L A + + + T ++DM
Sbjct: 325 FDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLG 384
Query: 364 KCNCGNLSY---KVFMKTSKKRTAPWNALLS-GFIHNSLVREAIQLFKQMLVKDVQPDNA 419
+ + +Y K +++ W ALLS G +H + E + + L++ Q +
Sbjct: 385 RFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRV--EIVSEASKRLIQSNQQVTS 442
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
+ +L AYAV + + ++ + RSG
Sbjct: 443 AYIALSNAYAVSGGWEDSESLRLEMKRSG 471
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/507 (30%), Positives = 255/507 (50%), Gaps = 28/507 (5%)
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
SW ++ ++ + +E + VY M ++G+ P V SVL ACG ++N+ G+ +HA
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 302
+ G G + V+ ++ +Y + G ++ A +++ E + V+W +L++GY+ +G+ A
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 303 -MLCRVMLLEGVKPNLV-----SVASLLSACGSFGSL-------------NYGKCLHAWA 343
+ ++ + V NL+ + +AC F ++ Y C
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL 250
Query: 344 IRQKLES----EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 399
R ++ + +I Y K + ++F SKK ++A+++ + N
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 400 REAIQLFKQMLVKD--VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 457
++A++LF QML ++ +QPD T +S++ A + L + + Y+ G +++
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLST 370
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 517
L+D+Y K G A +F+ L G +G A SLF M++ +
Sbjct: 371 SLIDLYMKGGDFAKAFKMFS--NLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKI 428
Query: 518 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 577
PN +TFT +L A SH+GLV EG F M K H + P DHY ++D+LGRAG+L +AY
Sbjct: 429 PPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 578 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG 637
LI++MP++PN VWGALL A H NVE GE+A +LE + TG LA +Y++VG
Sbjct: 488 ELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVG 547
Query: 638 RWRDAENVRDMVNVVGLRKLPAQSLVE 664
RW DA VRD + L K S VE
Sbjct: 548 RWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 209/450 (46%), Gaps = 72/450 (16%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
FSW ++R Q + + ++++++M +SG+ P + +++AC + + G +H
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIP-PSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 199
K G +VQ L+ +Y G E A+ FD + E+ VSWN++++GY + +E
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL----VKEKGFWGNMVVRN 255
A RV++++ P+ V L K ++G +K W N
Sbjct: 189 ARRVFDKI------PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW------N 236
Query: 256 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM------- 308
++ YV C +MK A + M + + V+W T+I+GY GD +SA L R+M
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 309 -----------------------LLEG---VKPNLVSVASLLSACGSFGSLNYGKCLHAW 342
+LE ++P+ ++++S++SA G+ ++G + ++
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 343 AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA 402
++ + ++ T+LID+Y K ++K+F +KK T ++A++ G N + EA
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL-------YRLEV 455
LF M+ K + P+ TF LL AY+ H L++ G+ + LE
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYS-----------HSGLVQEGYKCFNSMKDHNLEP 465
Query: 456 AS----ILVDIYSKCGSLGYAHHIFNIIPL 481
++ I+VD+ + G L A+ + +P+
Sbjct: 466 SADHYGIMVDMLGRAGRLEEAYELIKSMPM 495
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 166/341 (48%), Gaps = 29/341 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA---CS 126
+FD +P++ SWN ++ Y + G +A +LF S + L ++ I+I C
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLF-----SAMPLKSPASWNILIGGYVNCR 246
Query: 127 DL----SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV 182
++ ++ D M K G T + Y G+ + A+ +F LM ++ +
Sbjct: 247 EMKLARTYFD------AMPQKNGVSWITMISG-----YTKLGDVQSAEELFRLMSKKDKL 295
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLPACGLLKNVELGREVHA 240
++ MI Y +N + ++AL+++ +M++ ++PD T+ SV+ A L N G V +
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES 355
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ E G + ++ +++D+Y+K G +A+ + + +++ D V+++ +I G +NG A
Sbjct: 356 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALI 359
A L M+ + + PN+V+ LLSA G + G KC ++ LE ++
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMV 474
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAP-WNA-LLSGFIHNSL 398
DM + +Y++ + A W A LL+ +HN++
Sbjct: 475 DMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNV 515
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 252/546 (46%), Gaps = 47/546 (8%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 180
IIK CS L+ + K + D + N + + + A M+E
Sbjct: 779 IIKQCSTPKLLESALAA---MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 240
V +N + G+ + +L +Y RM+ V P T S++ A G + A
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQA 893
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ + GF ++ ++ ++D Y G+++EA + +EM E D + WTT+++ Y D S
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
A L M + N + L++ G+L + L
Sbjct: 954 ANSLANQM----SEKNEATSNCLINGYMGLGNLEQAESL--------------------- 988
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
F + K W ++ G+ N REAI +F +M+ + + PD T
Sbjct: 989 --------------FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
++++ A A L L+ +H Y +++GF+ + + S LVD+YSKCGSL A +F +P
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 481 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 540
HG + A+ +F +M V+PN +TF SV AC+HAGLVDEG
Sbjct: 1095 --KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
+++ M+ + I+ V+HY ++ L +AG + +A LI M +PN +WGALL C
Sbjct: 1153 RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCR 1212
Query: 601 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKL-PA 659
H+N+ + E+A LEP N+G Y LL ++YA RWRD +R + +G+ K+ P
Sbjct: 1213 IHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPG 1272
Query: 660 QSLVEV 665
S + +
Sbjct: 1273 TSSIRI 1278
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 27/351 (7%)
Query: 84 TMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG---VHGM 140
T++ Y GR +A +F EM D+ + ++ A + LDM + M
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPER-----DDIAWTTMVSAYRRV--LDMDSANSLANQM 961
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEA 200
+ K + N L+ YM G EQA+ +F+ M + ++SW TMI GY +N R EA
Sbjct: 962 SEK-----NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1016
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDM 260
+ V+ +MM+ G+ PD T+ +V+ AC L +E+G+EVH + GF ++ + +A++DM
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 261 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 320
Y KCG ++ A + + + ++ W ++I G +G A+ AL + M +E VKPN V+
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 321 ASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 379
S+ +AC G ++ G+ ++ I + S V ++ +++K L Y+
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK---AGLIYEALELIG 1193
Query: 380 KKRTAP----WNALLSGF-IHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
P W ALL G IH +LV I K M+ ++P N+ + LL
Sbjct: 1194 NMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMV---LEPMNSGYYFLL 1241
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ +P + + SW TM++ Y Q R +A+ +F +M+ G+ +PD T +I AC+ L
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI-IPDEVTMSTVISACAHLG 1046
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L++G VH T + GF LD ++ ++L+ MY G E+A LVF + ++ + WN++I
Sbjct: 1047 VLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIE 1106
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH-ALVKEKGFW 248
G + A+EAL+++ +M V+P+ T VSV AC V+ GR ++ +++ +
Sbjct: 1107 GLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIV 1166
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 291
N+ M+ ++ K G + EA L M+ E + V W L++G
Sbjct: 1167 SNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 301/639 (47%), Gaps = 53/639 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +L ++ S+ ++ + ++ +AL +F M +GL P+ +T+ I+ AC +S
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMY-MNAGEK-EQAQLVFDLMKEQTVVSWNTM 187
+G+ +HG+ K+GF FV NSL+++Y ++G + +FD + ++ V SWNT+
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTV 255
Query: 188 INGYFRNNRAEEALRVY---NRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 244
++ + ++ +A ++ NR+ GV D T+ ++L +C + GRE+H
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGV--DSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI----------- 293
G + V NA++ Y K MK+ L M D VT+T +I Y+
Sbjct: 314 IGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEI 373
Query: 294 --------------------LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 333
NG AL L ML GV+ S+ S + ACG
Sbjct: 374 FANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF------MKTSKKRTAPWN 387
+ +H + I+ ++TAL+DM +C + ++F + +SK T+
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTS--- 490
Query: 388 ALLSGFIHNSLVREAIQLFKQMLV-KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
++ G+ N L +A+ LF + L + + D + +L L + IHCY ++
Sbjct: 491 -IIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALK 549
Query: 447 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAV 506
+G+ + + + L+ +Y+KC A IFN + Y +G+ A+
Sbjct: 550 AGYFSDISLGNSLISMYAKCCDSDDAIKIFNT--MREHDVISWNSLISCYILQRNGDEAL 607
Query: 507 SLFNQMVQSGVQPNQITFTSVLHAC--SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
+L+++M + ++P+ IT T V+ A + + + LF M + I P +HYT +
Sbjct: 608 ALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFV 667
Query: 565 DLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 624
+LG G L +A + I +MP++P +V ALL +C H N + + A+ +PE
Sbjct: 668 RVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPS 727
Query: 625 NYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
Y+L +N+Y+A G W +E +R+ + G RK PA+S +
Sbjct: 728 EYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 245/524 (46%), Gaps = 44/524 (8%)
Query: 150 TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD 209
T + N+L++ Y+ G +A LVF + TVVS+ +I+G+ R N EAL+V+ RM
Sbjct: 114 TRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRK 173
Query: 210 AG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK--CGQ 266
AG V+P+ T V++L AC + LG ++H L+ + GF ++ V N+++ +Y K
Sbjct: 174 AGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSS 233
Query: 267 MKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM-LLEGVKPNLVSVASLLS 325
+ L +E+ + DV +W T+++ + G + A L M +EG + ++++LLS
Sbjct: 234 CDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 326 ACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK--------------------- 364
+C L G+ LH AIR L E+ V ALI Y+K
Sbjct: 294 SCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVT 353
Query: 365 ----------CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV 414
+ + ++F ++K T +NAL++GF N +A++LF ML + V
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 415 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 474
+ + + S + A ++++ K + IH + I+ G + + + L+D+ ++C + A
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEE 473
Query: 475 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ-MVQSGVQPNQITFTSVLHACSH 533
+F+ P Y ++G + AVSLF++ + + + ++++ T +L C
Sbjct: 474 MFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGT 533
Query: 534 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV-- 591
G + G + + LK + +I + + +DA + TM H V
Sbjct: 534 LGFREMGYQIHCYALKA-GYFSDISLGNSLISMYAKCCDSDDAIKIFNTM---REHDVIS 589
Query: 592 WGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 635
W +L+ + N + E A W+ E E + + L + +A
Sbjct: 590 WNSLISCYILQRNGD--EALALWSRMNEKEIKPDIITLTLVISA 631
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 211/401 (52%), Gaps = 2/401 (0%)
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
M A L M E D+V + ++ GY + L +L +G+ P+ + SLL
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 384
AC +L G+ LH +++ L+ V V LI+MY +C + + VF + +
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
+NA+++G+ + EA+ LF++M K ++P+ T S+L + A+L L IH Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 445 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 504
+ F ++V + L+D+++KCGSL A IF + Y HG E
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE--KMRYKDTQAWSAMIVAYANHGKAEK 314
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
++ +F +M VQP++ITF +L+ACSH G V+EG F M+ + I+P + HY ++
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 565 DLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 624
DLL RAG L DAY I +PI P +W LL AC SH N++L E + FEL+ + G
Sbjct: 375 DLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGG 434
Query: 625 NYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+YV+L+NLYA +W +++R ++ K+P S +EV
Sbjct: 435 DYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEV 475
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 154/268 (57%), Gaps = 1/268 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ + + + +N+M R Y + P + +LFVE++ G+ LPDN+T+P ++KAC+
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAK 143
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G +H ++ K G D + +V +L+ MY + + A+ VFD + E VV +N MI
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY R NR EAL ++ M ++P+ T++SVL +C LL +++LG+ +H K+ F
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V A++DM+ KCG + +A + +M D W+ +I Y +G A ++++ M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGK 337
E V+P+ ++ LL+AC G + G+
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGR 351
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 169/314 (53%), Gaps = 1/314 (0%)
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
A+ +F+ M E +V +N+M GY R E ++ +++ G+ PD T S+L AC +
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
K +E GR++H L + G N+ V +++MY +C + A + + + E VV + +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
I GY AL L R M + +KPN +++ S+LS+C GSL+ GK +H +A +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
V V TALIDM+AKC + + +F K K T W+A++ + ++ +++ +F++
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCG 467
M ++VQPD TF LL A + +++ ++ + G + ++ +VD+ S+ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 468 SLGYAHHIFNIIPL 481
+L A+ + +P+
Sbjct: 382 NLEDAYEFIDKLPI 395
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + + +N M+ Y + RP++AL+LF EM L P+ T ++ +C+ L
Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLK-PNEITLLSVLSSCALLG 244
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
LD+G +H K F V +L+ M+ G + A +F+ M+ + +W+ MI
Sbjct: 245 SLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFW 248
Y + +AE+++ ++ RM V+PD T + +L AC VE GR+ + +V + G
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
++ +M+D+ + G +++A+ +++
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 218/420 (51%), Gaps = 3/420 (0%)
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N + N +++ YV+ G + A + +EM + + TW +I G I L L R M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
G P+ ++ S+ S S++ G+ +H + I+ LE +++V ++L MY +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
V + WN L+ G N + L+K M + +P+ TF ++L + +
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
LA Q IH I+ G + V S L+ +YSKCG LG A F+
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS--EREDEDEVMW 261
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
YG HG G+ A+ LFN M Q+ ++ N++ F ++L+ACSH+GL D+GL LF M+
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+++ P + HYTC++DLLGRAG L+ A +IR+MPIK + +W LL AC H+N E+
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 381
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+ + +++P ++ YVLLAN++A+ RWRD VR + ++K S E + E
Sbjct: 382 QRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGE 441
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 199/411 (48%), Gaps = 10/411 (2%)
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN 185
S L V V+G K + N L+ Y+ AG+ A+ VFD M ++ + +WN
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
MI G + EE L ++ M G PD T+ SV L++V +G+++H +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
G ++VV +++ MY++ G++++ + M ++V W TLI G NG + L L
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
++M + G +PN ++ ++LS+C G+ +HA AI+ S V V ++LI MY+KC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 366 NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSL 424
C + K F + + W++++S + + EAI+LF M + +++ + F +L
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 425 LPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
L A + + + + ++ + GF L+ + +VD+ + G L A I +P+
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 484 XXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 534
H + EMA +F +++Q + PN + VL A HA
Sbjct: 361 DIVIWKTLLSAC-NIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHA 407
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 176/359 (49%), Gaps = 6/359 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R L +WN M+ +Q + L+LF EM G + PD +T + + L
Sbjct: 47 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLR 105
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G +HG T K G +LD V +SL MYM G+ + ++V M + +V+WNT+I
Sbjct: 106 SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIM 165
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G +N E L +Y M +G P+ T V+VL +C L G+++HA + G
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS 225
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ V ++++ MY KCG + +A +E ++ D V W+++I+ Y +G A+ L M
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 310 LE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ-KLESEVIVETALIDMYAKCNC 367
+ ++ N V+ +LL AC G + G L + + + + T ++D+ + C
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 368 GNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ + + K W LLS + A ++FK++L + P+++ LL
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLL 402
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 109/292 (37%), Gaps = 39/292 (13%)
Query: 359 IDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH----------------------N 396
+ MY+K + V+ + KK N L++G++ N
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 397 SLV---------REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 447
+++ E + LF++M PD T S+ A L + IH Y I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 448 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 507
G L V S L +Y + G L + +P+ ++G E +
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN--AQNGCPETVLY 178
Query: 508 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
L+ M SG +PN+ITF +VL +CS + +G + +K + + +I +
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS-LISMY 237
Query: 568 GRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH----ENVELGEVAARWT 615
+ G L DA + +W +++ A H E +EL A T
Sbjct: 238 SKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 288
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 219/439 (49%), Gaps = 50/439 (11%)
Query: 275 NEMDETDVVTWTTLINGYILNGDARSAL---MLCRVMLLEGVKPNLVSVASLLSACGSFG 331
N+M + + +W T+I G+ + + ++ + + +M E V+PN + S+L AC G
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 332 SLNYGKCLHAWAI---------------------------------------------RQ 346
+ GK +H A+ R+
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
K + E+++ +ID Y + + +F K ++ WN ++SG+ N ++A+++F
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 466
++M D++P+ T S+LPA + L L+ +H Y SG + S L+D+YSKC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 467 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTS 526
G + A H+F +P + HG A+ F +M Q+GV+P+ + + +
Sbjct: 323 GIIEKAIHVFERLP--RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 527 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 586
+L ACSH GLV+EG F M+ + P ++HY C++DLLGR+G L++A I MPIK
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIK 440
Query: 587 PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 646
P+ +W ALLGAC NVE+G+ A ++ P ++G YV L+N+YA+ G W + +R
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMR 500
Query: 647 DMVNVVGLRKLPAQSLVEV 665
+ +RK P SL+++
Sbjct: 501 LRMKEKDIRKDPGCSLIDI 519
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 165/315 (52%), Gaps = 47/315 (14%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHD--ALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+F+ +PQR+ FSWNT++R + + A+ LF EM+ P+ FT+P ++KAC+
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAK 140
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMY--------------------------- 160
+ G +HG+ K GF D FV ++L+ MY
Sbjct: 141 TGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 161 ------------------MNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALR 202
M G+ + A+++FD M++++VVSWNTMI+GY N ++A+
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 203 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV 262
V+ M + P+ T+VSVLPA L ++ELG +H ++ G + V+ +A++DMY
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 263 KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVAS 322
KCG +++A + + +V+TW+ +ING+ ++G A A+ M GV+P+ V+ +
Sbjct: 321 KCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 323 LLSACGSFGSLNYGK 337
LL+AC G + G+
Sbjct: 381 LLTACSHGGLVEEGR 395
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 182/398 (45%), Gaps = 53/398 (13%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAG----EKEQAQLVFDLMKEQTVVSWNTMINGYF 192
+H + K+G DT +L + + + A +F+ M ++ SWNT+I G+
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 193 RNNRAEEALRV---YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
++ + + + Y M D VEP+ T SVL AC ++ G+++H L + GF G
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161
Query: 250 NMVVRNAMLDMYVKCGQMKEA----------------------------W---------- 271
+ V + ++ MYV CG MK+A W
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 272 -------WLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
L ++M + VV+W T+I+GY LNG + A+ + R M ++PN V++ S+L
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 384
A GSL G+ LH +A + + ++ +ALIDMY+KC + VF + ++
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
W+A+++GF + +AI F +M V+P + + +LL A + +++ +
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 445 IR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ G R+E +VD+ + G L A +P+
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 439
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 113/281 (40%), Gaps = 50/281 (17%)
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE--AIQLFKQMLVKD-VQPDNATFNSLL 425
+ ++K+F + ++ WN ++ GF + + AI LF +M+ + V+P+ TF S+L
Sbjct: 76 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF--NII---- 479
A A +++ IH ++ GF V S LV +Y CG + A +F NII
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 480 -------------------------------------PLXXXXXXXXXXXXXXYGKHGHG 502
+ Y +G
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 503 EMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY-T 561
+ AV +F +M + ++PN +T SVL A S G ++ G L + + I + D +
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWL--HLYAEDSGIRIDDVLGS 313
Query: 562 CIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
+ID+ + G + A ++ +P + N W A++ H
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLY-RLEVASIL-----VDIYSKCGSLGYAHHIFN 477
L P ++ IH I+SG + L A IL D++ + L YAH IFN
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFN 83
Query: 478 IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGL 536
+P +A++LF +M+ V+PN+ TF SVL AC+ G
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 537 VDEGLSLFKFMLK 549
+ EG + LK
Sbjct: 144 IQEGKQIHGLALK 156
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 242/465 (52%), Gaps = 40/465 (8%)
Query: 235 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 294
G+++HA + + GF ++ + +L +++KCG + A + +E+ + + + +I+GY+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 295 NGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL-----NYGKCLHAWAIRQKLE 349
+G + L+L + M G K + +++ +L A S GS + + +HA I+ +E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 350 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
+ ++ TAL+D Y K + VF + +++SG+++ V +A ++F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 410 LVKDV--------------------------------QPDNATFNSLLPAYAVLADLKQA 437
VKD+ P+ +TF S++ A +VL +
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 438 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
+H +++SG +++ S L+D+Y+KCG + A +F+ + YG
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD--QMQEKNVFSWTSMIDGYG 350
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
K+G+ E A+ LF +M + ++PN +TF L ACSH+GLVD+G +F+ M + + + P +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 617
+HY CI+DL+GRAG LN A+ R MP +P+ +W ALL +C H NVEL +AA F+
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 618 LEPEN-TGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
L + G Y+ L+N+YA+ +W + +R+++ + K +S
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 180/366 (49%), Gaps = 50/366 (13%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD LP+ +L ++N M+ Y++ G + L L M +SG D +T +++KA +
Sbjct: 91 VFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSG-EKADGYTLSMVLKASNSRG 149
Query: 130 FL-----DMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 184
+ VH K +LD + +L+ Y+ +G+ E A+ VF+ MK++ VV
Sbjct: 150 STMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCC 209
Query: 185 NTMINGYFRNNRAEEALRVYN--------------------------------RMMDAGV 212
+MI+GY E+A ++N M AG
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 213 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
P+ +T SV+ AC +L + E+G++VHA + + G + ++ + +++LDMY KCG + +A
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 273 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 332
+ ++M E +V +WT++I+GY NG+ AL L M ++PN V+ LSAC G
Sbjct: 330 VFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 333 LNYGKCL-----HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR--TAP 385
++ G + ++++ K+E + +D+ + N +++ F + +R +
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACI----VDLMGRAGDLNKAFE-FARAMPERPDSDI 444
Query: 386 WNALLS 391
W ALLS
Sbjct: 445 WAALLS 450
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 176/385 (45%), Gaps = 38/385 (9%)
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G +H K GF D + LL +++ G A+ VFD + + T+ ++N MI+GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG-----LLKNVELGREVHALVKEKGFW 248
+ +E L + RM +G + D T+ VL A ++ L R VHA + +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG---DARSALMLC 305
+ V+ A++D YVK G+++ A + M + +VV T++I+GY+ G DA
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 306 RV-----------------------------MLLEGVKPNLVSVASLLSACGSFGSLNYG 336
+V M G PN+ + AS++ AC S G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 396
+ +HA ++ + + + + ++L+DMYAKC N + +VF + +K W +++ G+ N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 397 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEV 455
EA++LF +M ++P+ TF L A + + + I + R ++E
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 456 ASILVDIYSKCGSLGYAHHIFNIIP 480
+ +VD+ + G L A +P
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMP 437
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 197/379 (51%), Gaps = 4/379 (1%)
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
W ++ YI + A+ + M+ V P+ S+ ++ A GK LH+ A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 345 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 404
R + E+ I +Y K + KVF + +++ WNA++ G H EA++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 405 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI--LVDI 462
+F M ++PD+ T S+ + L DL A +H ++++ + ++ + L+D+
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 463 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 522
Y KCG + A HIF + Y +G+ A+ F QM + GV+PN+I
Sbjct: 265 YGKCGRMDLASHIFE--EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 523 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 582
TF VL AC H GLV+EG + F M + ++ P + HY CI+DLL R GQL +A ++
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 583 MPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDA 642
MP+KPN VWG L+G C +VE+ E A + ELEP N G YV+LAN+YA G W+D
Sbjct: 383 MPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDV 442
Query: 643 ENVRDMVNVVGLRKLPAQS 661
E VR ++ + K+PA S
Sbjct: 443 ERVRKLMKTKKVAKIPAYS 461
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 170/307 (55%), Gaps = 16/307 (5%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
F WN +MR Y++ P DA+ +++ M+ S + LPD ++ PI+IKA + +G +H
Sbjct: 83 FLWNNIMRSYIRHESPLDAIQVYLGMVRSTV-LPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 199
+ + GF D F ++ + +Y AGE E A+ VFD E+ + SWN +I G RA E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-----KEKGFWGNMVVR 254
A+ ++ M +G+EPD T+VSV +CG L ++ L ++H V +EK ++++
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK---SDIMML 258
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
N+++DMY KCG+M A + EM + +VV+W+++I GY NG+ AL R M GV+
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
PN ++ +LSAC G + GK A ++SE +E L + C LS
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAM-----MKSEFELEPGL--SHYGCIVDLLSRDG 371
Query: 375 FMKTSKK 381
+K +KK
Sbjct: 372 QLKEAKK 378
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 123/236 (52%), Gaps = 5/236 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD P+R L SWN ++ GR ++A+ +FV+M SGL PD+FT + +C L
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE-PDDFTMVSVTASCGGLG 232
Query: 130 FLDMGVGVHGMTFKAGFD--LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L + +H +A + D + NSL+ MY G + A +F+ M+++ VVSW++M
Sbjct: 233 DLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSM 292
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKG 246
I GY N EAL + +M + GV P+ T V VL AC VE G+ A++K E
Sbjct: 293 IVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSA 301
+ ++D+ + GQ+KEA + EM + +V+ W L+ G GD A
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 208/388 (53%), Gaps = 35/388 (9%)
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
KP+ + +L + +G+ +H + +S V V T LI MY C + K
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 374 VFMKTSKKRTAPWNALL---------------------------------SGFIHNSLVR 400
+F + K WNALL SG+ +
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 401 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV 460
EAI++F++ML+++V+PD T ++L A A L L+ I Y+ G + + + ++
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 461 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPN 520
D+Y+K G++ A +F + HGHG A+++FN+MV++GV+PN
Sbjct: 293 DMYAKSGNITKALDVFECV--NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 521 QITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI 580
+TF ++L ACSH G VD G LF M ++ I P ++HY C+IDLLGRAG+L +A +I
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 581 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWR 640
++MP K N A+WG+LL A H ++ELGE A +LEP N+GNY+LLANLY+ +GRW
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 641 DAENVRDMVNVVGLRKLPAQSLVEVRSE 668
++ +R+M+ +G++K+ +S +EV +
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSIEVENR 498
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 186/390 (47%), Gaps = 45/390 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRP--HDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+F P + + NTM+R + P H + + PD FT+P ++K
Sbjct: 69 VFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVR 128
Query: 128 LSFLDMGVGVHGMTFKAGFD-------------------------------LDTFVQNSL 156
+S + G +HG GFD D V N+L
Sbjct: 129 VSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 157 LAMYMNAGEKEQAQLVFDLMK--EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
LA Y GE ++A+ + ++M + VSW +I+GY ++ RA EA+ V+ RM+ VEP
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
D T+++VL AC L ++ELG + + V +G + + NA++DMY K G + +A +
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
++E +VVTWTT+I G +G AL + M+ GV+PN V+ ++LSAC G ++
Sbjct: 309 ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVD 368
Query: 335 YGKCLHAWAIRQKLESEVIVE--TALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLS 391
GK L ++R K +E +ID+ + + +V K A W +LL+
Sbjct: 369 LGKRLFN-SMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 392 GFIHNSLVREAIQLFKQMLVK--DVQPDNA 419
S V ++L ++ L + ++P+N+
Sbjct: 428 A----SNVHHDLELGERALSELIKLEPNNS 453
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 171/405 (42%), Gaps = 50/405 (12%)
Query: 126 SDLSFLDMGVGVHGMTFKA-----------GFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 174
S L++ + +HG K G + D + NAG A VF
Sbjct: 12 SGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFT 71
Query: 175 LMKEQTVVSWNTMINGYF---RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 231
NTMI N A+ VY ++ +PD T VL + +
Sbjct: 72 HQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSD 131
Query: 232 VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV--------- 282
V GR++H V GF ++ V ++ MY CG + +A + +EM DV
Sbjct: 132 VWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAG 191
Query: 283 ------------------------VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLV 318
V+WT +I+GY +G A A+ + + ML+E V+P+ V
Sbjct: 192 YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEV 251
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
++ ++LSAC GSL G+ + ++ + + V + A+IDMYAK + VF
Sbjct: 252 TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV 311
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA--DLKQ 436
+++ W +++G + EA+ +F +M+ V+P++ TF ++L A + + DL +
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ + + G +E ++D+ + G L A + +P
Sbjct: 372 RL-FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 128/332 (38%), Gaps = 80/332 (24%)
Query: 393 FIHNSLVRE------------AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 440
++HN+++R AI +++++ +PD TF +L ++D+ I
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 441 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN----------------------- 477
H ++ GF + V + L+ +Y CG LG A +F+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 478 --------IIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
++P Y K G A+ +F +M+ V+P+++T +VL
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 530 ACSHAGLVDEGLSLFKFM-------------------LKQHQIIPLVDHYTC-------- 562
AC+ G ++ G + ++ K I +D + C
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 563 ---IIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALLGACVSHENVELGEV---AAR 613
II L G +A +N + ++PN + A+L AC V+LG+ + R
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 614 WTFELEPENTGNYVLLANLYAAVGRWRDAENV 645
+ + P N +Y + +L G+ R+A+ V
Sbjct: 379 SKYGIHP-NIEHYGCMIDLLGRAGKLREADEV 409
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 243/483 (50%), Gaps = 13/483 (2%)
Query: 185 NTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
N+MI Y + ++ +Y + + PD T ++ +C L V G ++H+ +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
GF +M V ++DMY K G+M A +EM V+WT LI+GYI G+ A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 363
L M VK ++V +++ G + + L + VI T +I Y
Sbjct: 166 LFDQM--PHVK-DVVIYNAMMDGFVKSGDMTSARRL----FDEMTHKTVITWTTMIHGYC 218
Query: 364 KCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM-LVKDVQPDNATFN 422
+ + K+F ++ WN ++ G+ N +E I+LF++M + PD+ T
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
S+LPA + L HC++ R +++V + ++D+YSKCG + A IF+ +P
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-- 336
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
Y +G+ A+ LF M+ +P++IT +V+ AC+H GLV+EG
Sbjct: 337 EKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRK 395
Query: 543 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
F M ++ + ++HY C++DLLGRAG L +A +LI MP +PN + + L AC +
Sbjct: 396 WFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
Query: 603 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSL 662
+++E E + ELEP+N GNYVLL NLYAA RW D V++++ +K SL
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSL 514
Query: 663 VEV 665
+E+
Sbjct: 515 IEI 517
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 204/445 (45%), Gaps = 72/445 (16%)
Query: 70 LFDTLPQRS-LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
LFD PQR F N+M++ Y++ + D+ L+ ++ PDNFT+ + K+CS
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLS 91
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ G+ +H ++ GF D +V ++ MY G+ A+ FD M ++ VSW +I
Sbjct: 92 MCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALI 151
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+GY R + A +++++M P V
Sbjct: 152 SGYIRCGELDLASKLFDQM------PHVKDV----------------------------- 176
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
V+ NAM+D +VK G M A L +EM V+TWTT+I+GY D +A L M
Sbjct: 177 ---VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 309 --------------------LLEGVK------------PNLVSVASLLSACGSFGSLNYG 336
EG++ P+ V++ S+L A G+L+ G
Sbjct: 234 PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 337 KCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHN 396
+ H + R+KL+ +V V TA++DMY+KC + ++F + +K+ A WNA++ G+ N
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALN 353
Query: 397 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 456
R A+ LF M++++ +PD T +++ A +++ + G ++E
Sbjct: 354 GNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHY 412
Query: 457 SILVDIYSKCGSLGYAHHIFNIIPL 481
+VD+ + GSL A + +P
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPF 437
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 241/480 (50%), Gaps = 36/480 (7%)
Query: 223 LPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV 282
L C + + + +HA + + G + N ++++Y KCG A + +EM D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 283 VTWTTLINGY-ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
+ W +++ N ++ + V G++P+ ++L+ AC + GS+++G+ +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 401
I + ++ +V+++L+DMYAKC N + VF K T W A++SG+ + E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 402 AIQLFKQMLVKDVQPDNATFNSL------LPAYAVLADLKQ------------------- 436
A++LF+ + VK++ A + L A++V ++++
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 437 -------AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
+H +I GF + +++ L+D+Y+KC + A IF+ +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFS--RMRHRDVVSW 307
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
+HG E A++L++ MV GV+PN++TF +++ACSH G V++G LF+ M K
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG- 608
+ I P + HYTC++DLLGR+G L++A NLI TMP P+ W ALL AC ++G
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
+A + ++ Y+LL+N+YA+ W R + + +RK P S VEVR E
Sbjct: 428 RIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKE 487
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 177/398 (44%), Gaps = 42/398 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R +W +++ Q L++F + S PD+F + ++KAC++L
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLG 119
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+D G VH + + D V++SL+ MY G A+ VFD ++ + +SW M++
Sbjct: 120 SIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVS 179
Query: 190 GYFRNNRAEEALRVYNRM-----------------MDAGVEP---------------DCA 217
GY ++ R EEAL ++ + G+E D
Sbjct: 180 GYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL 239
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
+ S++ AC L GR+VH LV GF + + NA++DMY KC + A + + M
Sbjct: 240 VLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM 299
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
DVV+WT+LI G +G A AL L M+ GVKPN V+ L+ AC G + G+
Sbjct: 300 RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGR 359
Query: 338 CL-----HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP-WNALLS 391
L + IR L+ T L+D+ + + + + P W ALLS
Sbjct: 360 ELFQSMTKDYGIRPSLQH----YTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ I++ ++ D +T+ L YA
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYA 453
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 191/428 (44%), Gaps = 35/428 (8%)
Query: 122 IKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 181
++ C+ L +H K G + N+L+ +Y G A VFD M +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHA 240
++W +++ + N + + L V++ + + + PD +++ AC L +++ GR+VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ + VV+++++DMY KCG + A + + + + ++WT +++GY +G
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 301 ALMLCRVM----------LLEG----------------VKPNLVSV------ASLLSACG 328
AL L R++ L+ G ++ V + +S++ AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 329 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
+ + G+ +H I +S V + ALIDMYAKC+ + +F + + W +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS- 447
L+ G + +A+ L+ M+ V+P+ TF L+ A + + +++ + + +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 448 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVS 507
G L+ + L+D+ + G L A ++ + +P + G G+M +
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSAC-KRQGRGQMGIR 428
Query: 508 LFNQMVQS 515
+ + +V S
Sbjct: 429 IADHLVSS 436
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 281/597 (47%), Gaps = 87/597 (14%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD LP+R + +W ++ Y+++G +A LF + + S +
Sbjct: 68 LFDGLPERDVVTWTHVITGYIKLGDMREARELF-DRVDSRKNV----------------- 109
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+T+ A +++ Y+ + + A+++F M E+ VVSWNTMI+
Sbjct: 110 ----------VTWTA-----------MVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMID 148
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY ++ R ++AL +++ M +
Sbjct: 149 GYAQSGRIDKALELFDEMPER--------------------------------------- 169
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N+V N+M+ V+ G++ EA L M DVV+WT +++G NG A L M
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM- 228
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+ N++S ++++ ++ L + E + +I + + N
Sbjct: 229 ---PERNIISWNAMITGYAQNNRIDEADQL----FQVMPERDFASWNTMITGFIRNREMN 281
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAY 428
+ +F + +K W +++G++ N EA+ +F +ML V+P+ T+ S+L A
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ LA L + IH + +S V S L+++YSK G L A +F+ +
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLIS 401
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
Y HGHG+ A+ ++NQM + G +P+ +T+ ++L ACSHAGLV++G+ FK ++
Sbjct: 402 WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ + +HYTC++DL GRAG+L D N I + + + +GA+L AC H V +
Sbjct: 462 RDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIA 521
Query: 609 EVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+ + E ++ G YVL++N+YAA G+ +A +R + GL+K P S V+V
Sbjct: 522 KEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 189/449 (42%), Gaps = 82/449 (18%)
Query: 263 KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC-RVMLLEGVKPNLVSVA 321
K G++ EA L + + E DVVTWT +I GYI GD R A L RV + N+V+
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV----DSRKNVVTWT 113
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
+++S L+ + L ++ E V+ +ID YA+ + + ++F + ++
Sbjct: 114 AMVSGYLRSKQLSIAEML----FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 382 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV--------------QPDNA-------- 419
WN+++ + + EA+ LF++M +DV + D A
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 420 -----TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 474
++N+++ YA + +A + + F + ++ + + + A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNKACG 285
Query: 475 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSH 533
+F+ +P Y ++ E A+++F++M++ G V+PN T+ S+L ACS
Sbjct: 286 LFDRMP--EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 534 -AGLVDEGLSLFKFMLK----QHQII--PLVDHYT-----------------CIIDLL-- 567
AGLV EG + + + K +++I+ L++ Y+ C DL+
Sbjct: 344 LAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 568 ----------GRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 617
G + + YN +R KP+ + LL AC VE G +
Sbjct: 403 NSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR 462
Query: 618 LE--PENTGNYVLLANLYAAVGRWRDAEN 644
E P +Y L +L GR +D N
Sbjct: 463 DESLPLREEHYTCLVDLCGRAGRLKDVTN 491
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 258/528 (48%), Gaps = 42/528 (7%)
Query: 175 LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL 234
L++ +++ +N M+ + L ++ + G+ PD T+ VL + G L+ V
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 235 GREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYIL 294
G +VH + G + V N+++ MY G+++ + +EM + DVV+W LI+ Y+
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 295 NGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
NG A+ + + M E +K + ++ S LSAC + +L G+ ++ + + + E V
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
+ AL+DM+ KC C + + VF K W +++ G++ + EA LF++ VKD
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 414 V-------------------------------QPDNATFNSLLPAYAVLADLKQAMNIHC 442
V +PDN SLL A L+Q IH
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 443 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHG 500
Y+ + V + LVD+Y+KCG + A +F I YG +G
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK----ERDTASWTSLIYGLAMNG 359
Query: 501 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 560
A+ L+ +M GV+ + ITF +VL AC+H G V EG +F M ++H + P +H
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 561 TCIIDLLGRAGQLNDAYNLIRTMPIKPNHA---VWGALLGACVSHENVELGEVAARWTFE 617
+C+IDLL RAG L++A LI M + + V+ +LL A ++ NV++ E A +
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEK 479
Query: 618 LEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+E ++ + LLA++YA+ RW D NVR + +G+RK P S +E+
Sbjct: 480 VEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEI 527
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 220/437 (50%), Gaps = 35/437 (8%)
Query: 74 LPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDM 133
L SL +N M++ L LF E+ GL PDNFT P+++K+ L +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGL-YPDNFTLPVVLKSIGRLRKVIE 64
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G VHG KAG + D++V NSL+ MY + G+ E VFD M ++ VVSWN +I+ Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 194 NNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
N R E+A+ V+ RM ++ ++ D T+VS L AC LKN+E+G ++ V + F ++
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEM---------------------DET----------D 281
+ NA++DM+ KCG + +A + + M DE D
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 282 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
VV WT ++NGY+ AL L R M G++P+ + SLL+ C G+L GK +H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVRE 401
+ ++ + +V TAL+DMYAKC C + +VF + ++ TA W +L+ G N +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEVASILV 460
A+ L+ +M V+ D TF ++L A + + I H R + E S L+
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 461 DIYSKCGSLGYAHHIFN 477
D+ + G L A + +
Sbjct: 424 DLLCRAGLLDEAEELID 440
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 33/327 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +PQR + SWN ++ YV GR DA+ +F M D T + ACS L
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT--------- 180
L++G ++ F++ + N+L+ M+ G ++A+ VFD M+++
Sbjct: 163 NLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 181 ----------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
VV W M+NGY + NR +EAL ++ M AG+ PD
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
+VS+L C +E G+ +H + E + VV A++DMY KCG ++ A + E+
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-K 337
E D +WT+LI G +NG + AL L M GV+ + ++ ++L+AC G + G K
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAK 364
H+ R ++ + + LID+ +
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCR 428
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 218/426 (51%), Gaps = 37/426 (8%)
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF--GS 332
N+ V+WT+ IN NG A M L GV+PN ++ +LLS CG F GS
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 333 LNYGKCLHAWAIRQKLE-SEVIVETALIDMYAK--------------------------- 364
G LH +A + L+ + V+V TA+I MY+K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 365 --CNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
G + + K+F K ++ W A+++GF+ EA+ F++M + V+PD
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
+ L A L L + +H Y++ F + V++ L+D+Y +CG + +A +F
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF--YN 266
Query: 481 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 540
+ + +G+ ++ F +M + G +P+ +TFT L ACSH GLV+EG
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
L F+ M ++I P ++HY C++DL RAG+L DA L+++MP+KPN V G+LL AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 601 SH-ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPA 659
+H N+ L E + +L ++ NYV+L+N+YAA G+W A +R + +GL+K P
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 660 QSLVEV 665
S +E+
Sbjct: 447 FSSIEI 452
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 182/403 (45%), Gaps = 93/403 (23%)
Query: 179 QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG----------- 227
+T VSW + IN RN R EA + ++ M AGVEP+ T +++L CG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 228 ----------LLKN-VELGREVHALVKEKGFWG------------NMVVRNAMLDMYVKC 264
L +N V +G + + ++G + N V N M+D Y++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
GQ+ A + ++M E D+++WT +ING++ G AL+ R M + GVKP+ V++ + L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTA 384
+AC + G+L++G +H + + Q ++ V V +LID+Y +C C + +VF K+
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
WN+++ GF N E++ F++M K +PD TF L A + H L
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS-----------HVGL 322
Query: 445 IRSGFLY------------RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
+ G Y R+E LVD+YS+ G L A + +P+
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPM----------- 371
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
+PN++ S+L ACS+ G
Sbjct: 372 -------------------------KPNEVVIGSLLAACSNHG 389
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 36/319 (11%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG--VH 138
SW + + + + GR +A F +M +G+ P++ T+ ++ C D + +G +H
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVE-PNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 139 GMTFKAGFDLD-TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT----------- 186
G K G D + V +++ MY G ++A+LVFD M+++ V+WNT
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 187 --------------------MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 226
MING+ + EEAL + M +GV+PD +++ L AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 227 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 286
L + G VH V + F N+ V N+++D+Y +CG ++ A + M++ VV+W
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIR 345
++I G+ NG+A +L+ R M +G KP+ V+ L+AC G + G +
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 346 QKLESEVIVETALIDMYAK 364
++ + L+D+Y++
Sbjct: 337 YRISPRIEHYGCLVDLYSR 355
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 36/264 (13%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R L SW M+ +V+ G +AL F EM SG+ PD + AC++L
Sbjct: 162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK-PDYVAIIAALNACTNLG 220
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G+ VH F + V NSL+ +Y G E A+ VF M+++TVVSWN++I
Sbjct: 221 ALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIV 280
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKGFW 248
G+ N A E+L + +M + G +PD T L AC + VE G ++K +
Sbjct: 281 GFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRIS 340
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ ++D+Y + G++++A L M
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMP------------------------------ 370
Query: 309 LLEGVKPNLVSVASLLSACGSFGS 332
+KPN V + SLL+AC + G+
Sbjct: 371 ----MKPNEVVIGSLLAACSNHGN 390
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 255/526 (48%), Gaps = 3/526 (0%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+H K+ D + L Y + A+ +FD+ E++V WN++I Y + ++
Sbjct: 27 LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQ 86
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
L ++++++ + PD T + + + R +H + G + + +A
Sbjct: 87 FTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSA 146
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
++ Y K G + EA L + + D+ W +I GY G + L +M G +PN
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN 206
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
++ +L S L +HA+ ++ L+S V AL++MY++C C + VF
Sbjct: 207 CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 377 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
S+ ++L++G+ +EA+ LF ++ + +PD +L + A L+D
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVS 326
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
+H Y+IR G ++V S L+D+YSKCG L A +F IP
Sbjct: 327 GKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP--EKNIVSFNSLILGL 384
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL 556
G HG A F ++++ G+ P++ITF+++L C H+GL+++G +F+ M + I P
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 557 VDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF 616
+HY ++ L+G AG+L +A+ + ++ + + GALL C HEN L EV A
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIH 504
Query: 617 ELEPENTGNY-VLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
+ E Y V+L+N+YA GRW + E +RD ++ KLP S
Sbjct: 505 KNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 187/359 (52%), Gaps = 7/359 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD P+RS+F WN+++R Y + + L+LF +++ S T PDNFTY + + S+ S
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSD-TRPDNFTYACLARGFSE-S 119
Query: 130 FLDMGV-GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
F G+ +HG+ +G D ++++ Y AG +A +F + + + WN MI
Sbjct: 120 FDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVEL--GREVHALVKEKG 246
GY ++ + ++N M G +P+C T+V++ GL+ L VHA +
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS--GLIDPSLLLVAWSVHAFCLKIN 237
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
+ V A+++MY +C + A + N + E D+V ++LI GY G+ + AL L
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
+ + G KP+ V VA +L +C GK +H++ IR LE ++ V +ALIDMY+KC
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ +F +K +N+L+ G + A + F ++L + PD TF++LL
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 6/286 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF ++P L WN M+ Y G +NLF M H G P+ +T + D S
Sbjct: 163 LFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ-PNCYTMVALTSGLIDPS 221
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L + VH K D ++V +L+ MY A VF+ + E +V+ +++I
Sbjct: 222 LLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLIT 281
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY R +EAL ++ + +G +PDC V VL +C L + G+EVH+ V G
Sbjct: 282 GYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLEL 341
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ V +A++DMY KCG +K A L + E ++V++ +LI G L+G A +A +L
Sbjct: 342 DIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL 401
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
G+ P+ ++ ++LL C G LN G+ I ++++SE +E
Sbjct: 402 EMGLIPDEITFSALLCTCCHSGLLNKGQ-----EIFERMKSEFGIE 442
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 251/504 (49%), Gaps = 42/504 (8%)
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
FR + LR+ R T++SVL +C KN+ +HA + +
Sbjct: 15 FRRDPDSNTLRLSRR----------KTLISVLRSC---KNIAHVPSIHAKIIRTFHDQDA 61
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
V ++ + + A+ + + + +V +T +I+G++ +G + + L M+
Sbjct: 62 FVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHN 121
Query: 312 GVKPNLVSVASLLSACG--------------SFGSLN---------YGKC---LHAWAIR 345
V P+ + S+L AC FGS YGK ++A +
Sbjct: 122 SVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMF 181
Query: 346 QKL-ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 404
++ + + + T +I+ Y++C + ++F K T W A++ G + N + +A++
Sbjct: 182 DEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALE 241
Query: 405 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
LF++M +++V + T +L A + L L+ +H ++ V + L+++YS
Sbjct: 242 LFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYS 301
Query: 465 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITF 524
+CG + A +F + + HG A++ F MV G +PNQ+T
Sbjct: 302 RCGDINEARRVFRV--MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTL 359
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
++L+ACSH GL+D GL +F M + + P ++HY CI+DLLGR G+L +AY I +P
Sbjct: 360 VALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
I+P+H + G LL AC H N+ELGE A+ FE E ++G YVLL+NLYA+ G+W+++
Sbjct: 420 IEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTE 479
Query: 645 VRDMVNVVGLRKLPAQSLVEVRSE 668
+R+ + G+ K P S +EV ++
Sbjct: 480 IRESMRDSGIEKEPGCSTIEVDNQ 503
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 184/413 (44%), Gaps = 57/413 (13%)
Query: 110 LTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQA 169
L L T ++++C +++ + +H + D D FV L+ + + A
Sbjct: 24 LRLSRRKTLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYA 80
Query: 170 QLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLL 229
VF + V + MI+G+ + R+ + + +Y+RM+ V PD + SVL AC L
Sbjct: 81 YDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL- 139
Query: 230 KNVELGREVHALVKEKGF-------------WG------------------NMVVRNAML 258
++ RE+HA V + GF +G + V M+
Sbjct: 140 ---KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 259 DMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLV 318
+ Y +CG +KEA L ++ D V WT +I+G + N + AL L R M +E V N
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEF 256
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
+ +LSAC G+L G+ +H++ Q++E V ALI+MY++C N + +VF
Sbjct: 257 TAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA--------- 429
K +N ++SG + EAI F+ M+ + +P+ T +LL A +
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 430 -VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
V +K+ N+ ++E +VD+ + G L A+ IP+
Sbjct: 377 EVFNSMKRVFNVE---------PQIEHYGCIVDLLGRVGRLEEAYRFIENIPI 420
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 193/427 (45%), Gaps = 43/427 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + +++ + M+ +V GR D ++L+ MIH+ + LPDN+ ++KAC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSV-LPDNYVITSVLKACD--- 138
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM------------- 176
L + +H K GF V ++ +Y +GE A+ +FD M
Sbjct: 139 -LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 177 ------------------KEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
K + V W MI+G RN +AL ++ M V + T
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
V VL AC L +ELGR VH+ V+ + + V NA+++MY +CG + EA + M
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-K 337
+ DV+++ T+I+G ++G + A+ R M+ G +PN V++ +LL+AC G L+ G +
Sbjct: 318 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 397
++ +E ++ ++D+ + +Y+ P + +L +
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLSAC 434
Query: 398 LVREAIQLFKQM---LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+ ++L +++ L + PD+ T+ L YA K++ I + SG
Sbjct: 435 KIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPG 494
Query: 455 VASILVD 461
++I VD
Sbjct: 495 CSTIEVD 501
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 234/462 (50%), Gaps = 3/462 (0%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++P+++ +W M+ Y++ G +A LF + + G+ + + ++ CS +
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
++G VHG K G + V++SL+ Y GE A FD+M+E+ V+SW +I+
Sbjct: 199 EFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
R +A+ ++ M++ P+ TV S+L AC K + GR+VH+LV ++
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
++ V +++DMY KCG++ + + + M + VTWT++I + G A+ L R+M
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+ N ++V S+L ACGS G+L GK LHA I+ +E V + + L+ +Y KC
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
++ V + + W A++SG EA+ K+M+ + V+P+ T++S L A A
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
L +IH ++ L + V S L+ +Y+KCG + A +F+ +P
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP--EKNLVSW 555
Query: 490 XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
Y ++G A+ L +M G + + F ++L C
Sbjct: 556 KAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 201/376 (53%), Gaps = 4/376 (1%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD + ++ + SW ++ + G A+ +F+ M++ LP+ FT I+KACS+
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF-LPNEFTVCSILKACSEEKA 299
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
L G VH + K D FV SL+ MY GE + VFD M + V+W ++I
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
+ R EEA+ ++ M + + TVVS+L ACG + + LG+E+HA + + N
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKN 419
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
+ + + ++ +Y KCG+ ++A+ + ++ DVV+WT +I+G G AL + M+
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
EGV+PN + +S L AC + SL G+ +H+ A + S V V +ALI MYAKC +
Sbjct: 480 EGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSE 539
Query: 371 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+++VF +K W A++ G+ N REA++L +M + + D+ F ++L
Sbjct: 540 AFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599
Query: 431 LADLKQAM--NIHCYL 444
+ +L +A+ + CYL
Sbjct: 600 I-ELDEAVESSATCYL 614
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 228/461 (49%), Gaps = 6/461 (1%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+H M K D + N+L++ + G+ A+ VFD M E+ V+W MI+GY +
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 197 AEEALRVYNRMMDAGVE-PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
+EA ++ + G+ + V +L C ELGR+VH + + G GN++V +
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVES 222
Query: 256 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
+++ Y +CG++ A + M+E DV++WT +I+ G A+ + ML P
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
N +V S+L AC +L +G+ +H+ +++ ++++V V T+L+DMYAKC + KVF
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 376 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
S + T W ++++ EAI LF+ M + + +N T S+L A + L
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 436 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 495
+H +I++ + + S LV +Y KCG A ++ +P
Sbjct: 403 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP--SRDVVSWTAMISG 460
Query: 496 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
GH A+ +M+Q GV+PN T++S L AC+++ + G S+ K H +
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 556 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ + +I + + G +++A+ + +MP K N W A++
Sbjct: 521 VFVG-SALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 162/614 (26%), Positives = 267/614 (43%), Gaps = 109/614 (17%)
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
H + K+G L N L+ +Y +G +A+ VFD M E+ V SWN +I Y + N
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 198 EEA------------LRVYNRMMDAGVEPD-CA-----------------------TVVS 221
+EA L YN ++ + D C TV +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 222 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE------------ 269
++ L NV G ++H ++ + G G ++++ MY KCG+ KE
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 270 -----------AWWLANEMDET-----------DVVTWTTLINGYILNGDARSALMLCRV 307
A+ ++D+ D ++W TLI GY NG AL +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M G+K + S ++L+ S SL GK +HA ++ S V + ++D+Y C C
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVY--CKC 308
Query: 368 GNLSY---------------------------------KVFMKTSKKRTAPWNALLSGFI 394
GN+ Y ++F S+K W A+ G++
Sbjct: 309 GNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 395 HNSLVREAIQLFKQMLVKDVQ-PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 453
+ ++L + + + PD+ S+L A ++ A ++ IH + +R+G L
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK 428
Query: 454 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 513
++ + VD+YSKCG++ YA IF+ HGH + F M
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFD--SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT 486
Query: 514 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQL 573
+ G +P++ITF ++L AC H GLV EG FK M++ + I P HYTC+IDL G+A +L
Sbjct: 487 EGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRL 546
Query: 574 NDAYNLIRTMP-IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL 632
+ A L+ + ++ + + GA L AC ++N EL + +E N Y+ +AN
Sbjct: 547 DKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANA 606
Query: 633 YAAVGRWRDAENVR 646
YA+ GRW + + +R
Sbjct: 607 YASSGRWDEMQRIR 620
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD+L +++L W M Y+ + +P L L I + PD+ ++ ACS +
Sbjct: 348 LFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQA 407
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+++ G +HG + + G +D + + + MY G E A+ +FD E+ V +N MI
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIA 467
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLL----KNVELGREVHALV 242
G + ++ + + M + G +PD T +++L AC GL+ K + E + +
Sbjct: 468 GCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNIS 527
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD--ETDVVTWTTLING 291
E G + M+D+Y K ++ +A L +D E D V +N
Sbjct: 528 PETGHY------TCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA 572
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 205/368 (55%), Gaps = 3/368 (0%)
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
+L + M+ ++P+ + S +C + G+ +H +++ +++V V ++L+D
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
MYAKC + K+F + ++ W+ ++ G+ EA+ LFK+ L +++ ++ +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
F+S++ A L+ IH I+S F V S LV +YSKCG A+ +FN +P
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 481 LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 540
+ Y +H H + + LF +M SG++PN ITF +VL+ACSHAGLVDEG
Sbjct: 280 VKNLGIWNAMLKA--YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACV 600
F M K+ +I P HY ++D+LGRAG+L +A +I MPI P +VWGALL +C
Sbjct: 338 RYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCT 396
Query: 601 SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQ 660
H+N EL AA FEL P ++G ++ L+N YAA GR+ DA R ++ G +K
Sbjct: 397 VHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGL 456
Query: 661 SLVEVRSE 668
S VE R++
Sbjct: 457 SWVEERNK 464
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 183/359 (50%), Gaps = 22/359 (6%)
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR 193
G+ +HG K+G L V N+L+ Y + ++ F+ +++ +W+++I+ + +
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
N +L +MM + PD + S +C +L ++GR VH L + G+ ++ V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
++++DMY KCG++ A + +EM + +VVTW+ ++ GY G+ AL L + L E +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
N S +S++S C + L G+ +H +I+ +S V ++L+ +Y+KC +Y+
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
VF + K WNA+L + +S ++ I+LFK+M + ++P+ TF ++L A +
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS---- 329
Query: 434 LKQAMNIHCYLIRSGFLY-------RLEVA----SILVDIYSKCGSLGYAHHIFNIIPL 481
H L+ G Y R+E + LVD+ + G L A + +P+
Sbjct: 330 -------HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPI 381
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 154/294 (52%), Gaps = 1/294 (0%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F+ PQ+S +W++++ + Q P +L +M+ L PD+ P K+C+ LS
Sbjct: 73 FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR-PDDHVLPSATKSCAILSR 131
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
D+G VH ++ K G+D D FV +SL+ MY GE A+ +FD M ++ VV+W+ M+ G
Sbjct: 132 CDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYG 191
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
Y + EEAL ++ + + + + SV+ C +ELGR++H L + F +
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSS 251
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
V ++++ +Y KCG + A+ + NE+ ++ W ++ Y + + + L + M L
Sbjct: 252 SFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKL 311
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
G+KPN ++ ++L+AC G ++ G+ ++E +L+DM +
Sbjct: 312 SGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGR 365
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 144/265 (54%), Gaps = 6/265 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +PQR++ +W+ MM Y QMG +AL LF E + L + D +++ +I C++ +
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND-YSFSSVISVCANST 231
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L++G +HG++ K+ FD +FV +SL+++Y G E A VF+ + + + WN M+
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLK 291
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y +++ ++ + ++ RM +G++P+ T ++VL AC V+ GR +KE
Sbjct: 292 AYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEP 351
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTLINGYILNGDAR-SALMLCR 306
+++DM + G+++EA + M D T+ V W L+ ++ + +A +
Sbjct: 352 TDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV-WGALLTSCTVHKNTELAAFAADK 410
Query: 307 VMLLEGVKPNL-VSVASLLSACGSF 330
V L V + +S+++ +A G F
Sbjct: 411 VFELGPVSSGMHISLSNAYAADGRF 435
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 137/291 (47%), Gaps = 4/291 (1%)
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
N + LL + S G LH + ++ L +V LI+ Y+K S + F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 376 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
+ +K + W++++S F N L +++ K+M+ +++PD+ S + A+L+
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 436 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXX 495
++HC +++G+ + V S LVD+Y+KCG + YA +F+ +P
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP--QRNVVTWSGMMYG 191
Query: 496 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
Y + G E A+ LF + + + N +F+SV+ C+++ L++ G + + +
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDS 250
Query: 556 LVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 606
+ ++ L + G AY + +P+K N +W A+L A H + +
Sbjct: 251 SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 282/593 (47%), Gaps = 48/593 (8%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
SW+T++ + G L VE+I+ G PD +++ + ++ + +HG
Sbjct: 23 SWSTIVPALARFGSI-GVLRAAVELINDG-EKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEA 200
K GF +T + NSL+ Y + E A VFD M + V+SWN++++GY ++ R +E
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKEKGFWGNMVVRNAMLD 259
+ ++ + + V P+ + + L AC L LG +H+ LVK GN+VV N ++D
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 260 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVS 319
MY KCG M +A + M+E D V+W ++
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIV------------------------------ 230
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS 379
++C G L G W Q + + LID + K N +++V
Sbjct: 231 -----ASCSRNGKLELG----LWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP 281
Query: 380 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 439
++ WN +L+G++++ EA + F +M V+ D + + +L A A LA +
Sbjct: 282 NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSL 341
Query: 440 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKH 499
IH + G R+ VAS L+D+YSKCG L +A +F +P Y ++
Sbjct: 342 IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP--RKNLIVWNEMISGYARN 399
Query: 500 GHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDE-GLSLFKFMLKQHQIIPLV 557
G A+ LFNQ+ Q ++P++ TF ++L CSH + E L F+ M+ +++I P V
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 617
+H +I +G+ G++ A +I+ + W ALLGAC + ++++ + A E
Sbjct: 460 EHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIE 519
Query: 618 LEPENTGN--YVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
L + Y++++NLYA RWR+ +R ++ G+ K S ++ R++
Sbjct: 520 LGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTK 572
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 172/358 (48%), Gaps = 42/358 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P + SWN+++ YVQ GR + + LF+E+ H P+ F++ + AC+ L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLEL-HRSDVFPNEFSFTAALAACARLH 170
Query: 130 FLDMGVGVHGMTFKAGFDL-DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+G +H K G + + V N L+ MY G + A LVF M+E+ VSWN ++
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV 230
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
RN + E L +++M + PD T
Sbjct: 231 ASCSRNGKLELGLWFFHQMPN----PDTVTY----------------------------- 257
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N ++D +VK G A+ + ++M + +W T++ GY+ + + A M
Sbjct: 258 ------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
GV+ + S++ +L+A + + +G +HA A + L+S V+V +ALIDMY+KC
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLL 425
+ +F +K WN ++SG+ N EAI+LF Q+ + ++PD TF +LL
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 21/255 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ +P + SWNT++ YV + +A F +M SG+ D ++ I++ A + L+
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF-DEYSLSIVLAAVAALA 334
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +H K G D V ++L+ MY G + A+L+F M + ++ WN MI+
Sbjct: 335 VVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMIS 394
Query: 190 GYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY RN + EA++++N++ + ++PD T +++L C + E+ EV G++
Sbjct: 395 GYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC---SHCEVPMEVML-----GYF 446
Query: 249 GNMVVRNAMLDMYVKC-------GQMKEAWWLANEMDE----TDVVTWTTLINGYILNGD 297
M+ + C GQ E W + E D V W L+ D
Sbjct: 447 EMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKD 506
Query: 298 ARSALMLCRVMLLEG 312
++A + M+ G
Sbjct: 507 LKAAKTVAAKMIELG 521
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 207/416 (49%), Gaps = 35/416 (8%)
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 340
+V+ + +I Y L G +L M G+ + + A LL +C S L +GKC+H
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVH 125
Query: 341 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF------- 393
IR + ++++Y + KVF + S++ WN ++ GF
Sbjct: 126 GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVE 185
Query: 394 --IH-------------NSLV---------REAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+H NS++ REA++LF +M+ + PD AT ++LP A
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245
Query: 430 VLADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
L L IH SG F + V + LVD Y K G L A IF +
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR--KMQRRNVVS 303
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+G GE + LF+ M++ G V PN+ TF VL CS+ G V+ G LF M
Sbjct: 304 WNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLM 363
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+++ ++ +HY ++DL+ R+G++ +A+ ++ MP+ N A+WG+LL AC SH +V+L
Sbjct: 364 MERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKL 423
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
EVAA ++EP N+GNYVLL+NLYA GRW+D E VR ++ LRK QS +
Sbjct: 424 AEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 188/386 (48%), Gaps = 40/386 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + ++ +N M++ Y +G P ++L+ F M G+ D +TY ++K+CS LS
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI-WADEYTYAPLLKSCSSLS 116
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G VHG + GF ++ ++ +Y + G AQ VFD M E+ VV WN MI
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 190 GY------------FRN-------------------NRAEEALRVYNRMMDAGVEPDCAT 218
G+ F+ R EAL ++ M+D G +PD AT
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMV-VRNAMLDMYVKCGQMKEAWWLANEM 277
VV+VLP L ++ G+ +H+ + G + + + V NA++D Y K G ++ A + +M
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNYG 336
+VV+W TLI+G +NG + L M+ EG V PN + +L+ C G + G
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Query: 337 KCLHAWAI-RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT--SKKRTAPWNALLSGF 393
+ L + R KLE+ A++D+ ++ ++K F+K A W +LLS
Sbjct: 357 EELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK-FLKNMPVNANAAMWGSLLSAC 415
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNA 419
+ V+ A ++ LVK ++P N+
Sbjct: 416 RSHGDVKLA-EVAAMELVK-IEPGNS 439
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 38/367 (10%)
Query: 153 QNSLLAMYMNA----GEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 208
N LLA +++ + A VF ++ V+ +N MI Y E+L ++ M
Sbjct: 35 SNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMK 94
Query: 209 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMK 268
G+ D T +L +C L ++ G+ VH + GF +R ++++Y G+M
Sbjct: 95 SRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMG 154
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDA------------------------------ 298
+A + +EM E +VV W +I G+ +GD
Sbjct: 155 DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGR 214
Query: 299 -RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI-VET 356
R AL L M+ +G P+ +V ++L S G L+ GK +H+ A L + I V
Sbjct: 215 DREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGN 274
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DVQ 415
AL+D Y K + +F K ++ WN L+SG N I LF M+ + V
Sbjct: 275 ALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA 334
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHH 474
P+ ATF +L + +++ + ++ R R E +VD+ S+ G + A
Sbjct: 335 PNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK 394
Query: 475 IFNIIPL 481
+P+
Sbjct: 395 FLKNMPV 401
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 113/300 (37%), Gaps = 32/300 (10%)
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+HA +R L ++ I + + + + +VF +NA++ +
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 458
E++ F M + + D T+ LL + + L+DL+ +H LIR+GF +RL I
Sbjct: 83 PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGF-HRLGKIRI 141
Query: 459 -LVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKH------------ 499
+V++Y+ G +G A +F N++ G H
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 500 -----------GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
G A+ LF +M+ G P++ T +VL + G++D G +
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 608
+ ++D ++G L A + R M + N W L+ + E G
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 217/433 (50%), Gaps = 8/433 (1%)
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
+++HA+V GF + +L+ V G M A + +EM + + W TL GY+ N
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
+L+L + M GV+P+ + ++ A G + G LHA ++ IV
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSK--KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
T L+ MY K G LS F+ S K WNA L+ + A++ F +M
Sbjct: 148 TELVMMYMKF--GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
VQ D+ T S+L A L L+ I+ + + V + +D++ KCG+ A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 533
+F + Y +G A++LF M G++PN +TF VL ACSH
Sbjct: 266 VLFE--EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 534 AGLVDEGLSLFKFMLKQHQ--IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAV 591
AGLV+EG F M++ + + P +HY C++DLLGR+G L +AY I+ MP++P+ +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 592 WGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNV 651
WGALLGAC H ++ LG+ A E P+ +VLL+N+YAA G+W + VR +
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 652 VGLRKLPAQSLVE 664
+G +K+ A S VE
Sbjct: 444 LGTKKVAAYSSVE 456
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 188/365 (51%), Gaps = 32/365 (8%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + +F WNT+ + YV+ P ++L L+ +M G+ PD FTYP ++KA S L
Sbjct: 65 VFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR-PDEFTYPFVVKAISQLG 123
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G +H K GF V L+ MYM GE A+ +F+ M+ + +V+WN +
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
+ + AL +N+M V+ D TVVS+L ACG L ++E+G E++ +++
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
N++V NA LDM++KCG + A L EM + +VV+W+T+I GY +NGD+R AL L M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
EG++PN V+ +LSAC G +N GK + + N N
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGK-------------------RYFSLMVQSNDKN 344
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
L + R + ++ + L+ EA + K+M V+PD + +LL A A
Sbjct: 345 L---------EPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACA 392
Query: 430 VLADL 434
V D+
Sbjct: 393 VHRDM 397
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 3/348 (0%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+H + + GF + LL + G+ A+ VFD M + + WNT+ GY RN
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
E+L +Y +M D GV PD T V+ A L + G +HA V + GF +V
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 257 MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
++ MY+K G++ A +L M D+V W + + G++ AL M + V+ +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
+V S+LSACG GSL G+ ++ A +++++ +IVE A +DM+ KC + +F
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 377 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
+ ++ W+ ++ G+ N REA+ LF M + ++P+ TF +L A + + +
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 437 AMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+++S R E + +VD+ + G L A+ +P+
Sbjct: 330 GKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/576 (26%), Positives = 262/576 (45%), Gaps = 36/576 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ +P+R SWN ++ Q G + +F M G+ + ++ ++K+C +
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATET-SFAGVLKSCGLIL 176
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L + +H K G+ + ++ S++ +Y A+ VFD + + VSWN ++
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR 236
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y +EA+ ++ +M++ V P TV SV+ AC +E+G+ +HA+ +
Sbjct: 237 RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM- 308
+ VV ++ DMYVKC +++ A + ++ D+ +WT+ ++GY ++G R A L +M
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 309 ----------------------------LLEGVKPNL--VSVASLLSACGSFGSLNYGKC 338
L+ N+ V++ +L+ C + GK
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR-TAPWNALLSGFIHNS 397
H + R ++ VIV AL+DMY KC + F + S+ R WNALL+G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVAS 457
+A+ F+ M V + +P T +LL A + L IH +LIR G+ + +
Sbjct: 477 RSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 517
+VD+YSKC YA +F ++G + LF + GV
Sbjct: 536 AMVDMYSKCRCFDYAIEVFK--EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGV 593
Query: 518 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 577
+P+ +TF +L AC G V+ G F M ++ I P V+HY C+I+L + G L+
Sbjct: 594 KPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLE 653
Query: 578 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 613
+ MP P + + AC + +LG AA+
Sbjct: 654 EFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAK 689
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/557 (24%), Positives = 256/557 (45%), Gaps = 70/557 (12%)
Query: 118 YPIIIKACSDLSFLDMG--VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDL 175
Y + ++CS + + V H +TF + F+ N + Y G + A+ +F+
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPI--FLLNRAIEAYGKCGCVDDARELFEE 121
Query: 176 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
M E+ SWN +I +N ++E R++ RM GV + VL +CGL+ ++ L
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
R++H V + G+ GN+ + +++D+Y KC M +A + +E+ V+W ++ Y+
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
G A+++ ML V+P +V+S++ AC +L GK +HA A++ + ++ +V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV- 414
T++ DMY KC+ + +VF +T K W + +SG+ + L REA +LF M +++
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 415 ------------------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYL 444
DN T +L + ++D++ H ++
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 445 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 504
R G+ + VA+ L+D+Y KCG+L A+ F + + G E
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS-ELRDEVSWNALLTGVARVGRSEQ 480
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII------PLVD 558
A+S F M Q +P++ T ++L C++ ++ G ++ F+++ I +VD
Sbjct: 481 ALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 559 HYT---------------CIIDLL------------GRAGQLNDAYNLIRTMPIKPNHAV 591
Y+ DL+ GR+ ++ + + L+ +KP+H
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 592 WGALLGACVSHENVELG 608
+ +L AC+ +VELG
Sbjct: 600 FLGILQACIREGHVELG 616
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/563 (26%), Positives = 272/563 (48%), Gaps = 37/563 (6%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
VH +AGF T+ N L +Y +G A +FD + ++ ++WN + G F+N
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACG----------------------------- 227
AL +++ M + V T++S L +CG
Sbjct: 86 LNNALDLFDEMPERDV-VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILAS 144
Query: 228 LLKNVELGREVHALVKEKGFWG-NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWT 286
L+ V G ++H G N+VV N+++DMY + G A + M++ DVV+W
Sbjct: 145 LVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWN 204
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
LI +G+ AL +M ++P+ +V+ ++S C L+ GK A I+
Sbjct: 205 CLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKM 264
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
S IV A IDM++KCN + S K+F + K + N+++ + + +A++LF
Sbjct: 265 GFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF 324
Query: 407 KQMLVKDVQPDNATFNSLLPAY-AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 465
+ + V+PD TF+S+L + AV+ D ++H +I+ GF VA+ L+++Y K
Sbjct: 325 ILAMTQSVRPDKFTFSSVLSSMNAVMLD--HGADVHSLVIKLGFDLDTAVATSLMEMYFK 382
Query: 466 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITF 524
GS+ A +F ++ ++++FNQ++ ++P+++T
Sbjct: 383 TGSVDLAMGVF--AKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTL 440
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
+L AC +AG V+EG+ +F M K H + P +HY CII+LL R G +N+A ++ +P
Sbjct: 441 MGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
+P+ +W +L A + + L E A+ E EP+++ Y++L +Y RW ++
Sbjct: 501 FEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVK 560
Query: 645 VRDMVNVVGLRKLPAQSLVEVRS 667
+R +N L+ S + + S
Sbjct: 561 LRYAMNEHKLKSAQGSSKISIES 583
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 208/415 (50%), Gaps = 8/415 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P+R + SWNTM+ V G + +F +M + P FT+ I+ S ++
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIR-PTEFTFSIL---ASLVT 147
Query: 130 FLDMGVGVHGMTFKAGFD-LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
+ G +HG +G + V NS++ MY G + A VF M+++ VVSWN +I
Sbjct: 148 CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLI 207
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
+ E AL + M + ++PD TV V+ C L+ + G++ AL + GF
Sbjct: 208 LSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFL 267
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
N +V A +DM+ KC ++ ++ L E+++ D V ++I Y + AL L +
Sbjct: 268 SNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILA 327
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ + V+P+ + +S+LS+ + L++G +H+ I+ + + V T+L++MY K
Sbjct: 328 MTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSV 386
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV-KDVQPDNATFNSLLPA 427
+L+ VF KT K WN ++ G NS E++ +F Q+L+ + ++PD T +L A
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 428 YAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ + + I + ++ G E + ++++ + G + A I + IP
Sbjct: 447 CCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 10/241 (4%)
Query: 77 RSLFSW-----NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 131
R L W N+M+ Y DAL LF+ + + PD FT+ ++ + + + L
Sbjct: 294 RELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVR-PDKFTFSSVLSSMNAV-ML 351
Query: 132 DMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 191
D G VH + K GFDLDT V SL+ MY G + A VF + ++ WNT+I G
Sbjct: 352 DHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGL 411
Query: 192 FRNNRAEEALRVYNR-MMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVKEKGFWG 249
RN+RA E+L ++N+ +M+ ++PD T++ +L AC V G ++ ++ K G
Sbjct: 412 ARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNP 471
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVM 308
++++ + G + EA +A+++ E W ++ + GD R A + + M
Sbjct: 472 GNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTM 531
Query: 309 L 309
L
Sbjct: 532 L 532
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 215/414 (51%), Gaps = 34/414 (8%)
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
+ LI Y ++ +++L ++ +G++P+ + + +A SF S + LH+
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 345 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQ 404
R ES+ T LI YAK + +VF + SK+ WNA+++G+ ++ A++
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAME 169
Query: 405 LFKQMLVKDV--------------------------------QPDNATFNSLLPAYAVLA 432
LF M K+V +P++ T S+LPA A L
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
+L+ + Y +GF + V + +++YSKCG + A +F +
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG-NQRNLCSWNSM 288
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
HG + A++LF QM++ G +P+ +TF +L AC H G+V +G LFK M + H+
Sbjct: 289 IGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHK 348
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 612
I P ++HY C+IDLLGR G+L +AY+LI+TMP+KP+ VWG LLGAC H NVE+ E+A+
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIAS 408
Query: 613 RWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS-LVEV 665
F+LEP N GN V+++N+YAA +W +R ++ + K S VEV
Sbjct: 409 EALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV 462
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 147/301 (48%), Gaps = 34/301 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD F +N +++ Y +PH+++ L+ + GL P + T+ I A + S
Sbjct: 38 LFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLR-PSHHTFNFIFAASASFS 96
Query: 130 FLDMGVGVHGMTFKAGFDLDTF-------------------------------VQNSLLA 158
+H F++GF+ D+F V N+++
Sbjct: 97 SARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMIT 156
Query: 159 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM-MDAGVEPDCA 217
Y G+ + A +FD M + V SW T+I+G+ +N EAL+++ M D V+P+
Sbjct: 157 GYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHI 216
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
TVVSVLPAC L +E+GR + +E GF+ N+ V NA ++MY KCG + A L E+
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 278 -DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
++ ++ +W ++I +G AL L ML EG KP+ V+ LL AC G + G
Sbjct: 277 GNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKG 336
Query: 337 K 337
+
Sbjct: 337 Q 337
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 142/268 (52%), Gaps = 17/268 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD++P++++ SW T++ + Q G +AL +F+ M P++ T ++ AC++L
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMKEQTVVSWNTMI 188
L++G + G + GF + +V N+ + MY G + A+ +F +L ++ + SWN+MI
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC----GLLKNVELGR---EVHAL 241
+ + +EAL ++ +M+ G +PD T V +L AC ++K EL + EVH +
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARS 300
+ +G M+D+ + G+++EA+ L M + D V W TL+ +G+
Sbjct: 350 SPKLEHYG------CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEI 403
Query: 301 ALMLCRVML-LEGVKP-NLVSVASLLSA 326
A + + LE P N V ++++ +A
Sbjct: 404 AEIASEALFKLEPTNPGNCVIMSNIYAA 431
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 44/352 (12%)
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGL 228
A+ +FD + +N +I Y+ +++ E++ +YN + G+ P T + A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
+ R +H+ GF + ++ Y K G + A + +EM + DV W +
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 289 INGYILNGDARSALMLCRVM----------LLEG----------------------VKPN 316
I GY GD ++A+ L M ++ G VKPN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
++V S+L AC + G L G+ L +A + V A I+MY+KC +++ ++F
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 377 KTSKKRT-APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
+ +R WN+++ + EA+ LF QML + +PD TF LL LA +
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL-----LACVH 329
Query: 436 QAMNIHCY-LIRS-----GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
M + L +S +LE ++D+ + G L A+ + +P+
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPM 381
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 51/308 (16%)
Query: 333 LNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNAL 389
+N K LHA +R + E++ +++ L+ NL Y K+F T +N L
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLL-------IPNLVYARKLFDHHQNSCTFLYNKL 53
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
+ + + E+I L+ + ++P + TFN + A A + + +H RSGF
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 450 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLF 509
+ L+ Y+K G+L A +F+ + Y + G + A+ LF
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFD--EMSKRDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 510 NQM----------VQSG----------------------VQPNQITFTSVLHACSHAGLV 537
+ M V SG V+PN IT SVL AC++ G +
Sbjct: 172 DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 538 DEGLSLFKFMLKQHQIIPLVDH-YTC--IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGA 594
+ G L + + D+ Y C I++ + G ++ A L + + N W +
Sbjct: 232 EIGRRLEGYAREN----GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS 287
Query: 595 LLGACVSH 602
++G+ +H
Sbjct: 288 MIGSLATH 295
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 226/441 (51%), Gaps = 39/441 (8%)
Query: 261 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 320
Y G+++ + L ++ + D+ +T IN +NG A +L +L + PN +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 321 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK---------------- 364
+SLL +C S GK +H ++ L + V T L+D+YAK
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 365 ---------CNC----GNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
C GN+ + +F ++ WN ++ G+ + +A+ LF+++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 410 LVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
L + +PD T + L A + + L+ IH ++ S ++V + L+D+YSKCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTSV 527
L A +FN P Y HG+ + A+ LFN+M +G+QP ITF
Sbjct: 310 LEEAVLVFNDTP--RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 528 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKP 587
L AC+HAGLV+EG+ +F+ M +++ I P ++HY C++ LLGRAGQL AY I+ M +
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 588 NHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 647
+ +W ++LG+C H + LG+ A + L +N+G YVLL+N+YA+VG + VR+
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 648 MVNVVGLRKLPAQSLVEVRSE 668
++ G+ K P S +E+ ++
Sbjct: 488 LMKEKGIVKEPGISTIEIENK 508
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 148/318 (46%), Gaps = 43/318 (13%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF LF + + G A L+V+++ S + P+ FT+ ++K+CS S
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEIN-PNEFTFSSLLKSCSTKS 144
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT--------- 180
G +H K G +D +V L+ +Y G+ AQ VFD M E++
Sbjct: 145 ----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 181 ----------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCA 217
+VSWN MI+GY ++ +AL ++ +++ G +PD
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
TVV+ L AC + +E GR +H VK N+ V ++DMY KCG ++EA + N+
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVKPNLVSVASLLSACGSFGSLNYG 336
D+V W +I GY ++G ++ AL L M + G++P ++ L AC G +N G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 337 KCL-----HAWAIRQKLE 349
+ + I+ K+E
Sbjct: 381 IRIFESMGQEYGIKPKIE 398
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 3/231 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD++ +R + SWN M+ Y Q G P+DAL LF +++ G PD T + ACS +
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G +H + L+ V L+ MY G E+A LVF+ + +V+WN MI
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIA 333
Query: 190 GYFRNNRAEEALRVYNRMMD-AGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGF 247
GY + +++ALR++N M G++P T + L AC V G R ++ +E G
Sbjct: 334 GYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
+ ++ + + GQ+K A+ M+ + D V W++++ L+GD
Sbjct: 394 KPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 38/348 (10%)
Query: 160 YMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV 219
Y + G+ + +F + + + IN N ++A +Y +++ + + P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 220 VSVLPACGLLKNVELGREVHALVKEKGFW------------------------------- 248
S+L +C + + G+ +H V + G
Sbjct: 134 SSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
++V AM+ Y K G ++ A L + M E D+V+W +I+GY +G ALML + +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 309 LLEG-VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
L EG KP+ ++V + LSAC G+L G+ +H + ++ V V T LIDMY+KC
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQPDNATFNSLLP 426
+ VF T +K WNA+++G+ + ++A++LF +M + +QP + TF L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 427 AYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAH 473
A A + + + I + + G ++E LV + + G L A+
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 217/427 (50%), Gaps = 33/427 (7%)
Query: 270 AWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 329
A+ + +++ ++ + LI + + A ML + P+ ++ L+ A
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC------------------------ 365
+ G+ H+ +R +++V VE +L+ MYA C
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 366 -----NCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
CG + + ++F + + W+ +++G+ N+ +AI LF+ M + V +
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 419 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 478
S++ + A L L+ + Y+++S L + + LVD++ +CG + A H+F
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
+P HGH A+ F+QM+ G P +TFT+VL ACSH GLV+
Sbjct: 310 LP--ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGA 598
+GL +++ M K H I P ++HY CI+D+LGRAG+L +A N I M +KPN + GALLGA
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 599 CVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLP 658
C ++N E+ E +++PE++G YVLL+N+YA G+W E++RDM+ ++K P
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 487
Query: 659 AQSLVEV 665
SL+E+
Sbjct: 488 GWSLIEI 494
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 182/390 (46%), Gaps = 38/390 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F + +LF +N ++R + P A + +M+ S + PDN T+P +IKA S++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRI-WPDNITFPFLIKASSEME 131
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAG------------------------- 164
+ +G H + GF D +V+NSL+ MY N G
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 165 ------EKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCAT 218
E A+ +FD M + + +W+ MINGY +NN E+A+ ++ M GV +
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
+VSV+ +C L +E G + V + N+++ A++DM+ +CG +++A + +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 279 ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC 338
ETD ++W+++I G ++G A A+ M+ G P V+ ++LSAC G + G
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG-- 369
Query: 339 LHAWAIRQK---LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
L + +K +E + ++DM + + +K K AP L G
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 396 NSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
E + ML+K V+P+++ + LL
Sbjct: 430 IYKNTEVAERVGNMLIK-VKPEHSGYYVLL 458
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 181/398 (45%), Gaps = 44/398 (11%)
Query: 116 FTYP--IIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ----- 168
F +P ++++CS SF D+ + +HG + D FV + LLA+ ++ +
Sbjct: 11 FKHPKLALLQSCS--SFSDLKI-IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLL 67
Query: 169 --AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 226
A +F ++ + +N +I + +A Y +M+ + + PD T ++ A
Sbjct: 68 GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 227 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYV------------------------ 262
++ V +G + H+ + GF ++ V N+++ MY
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 263 -------KCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
KCG ++ A + +EM ++ TW+ +INGY N A+ L M EGV
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
N + S++S+C G+L +G+ + + ++ + +I+ TAL+DM+ +C + VF
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 376 MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
+ + W++++ G + +A+ F QM+ P + TF ++L A + ++
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 436 QAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYA 472
+ + I+ + + G RLE +VD+ + G L A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 41/317 (12%)
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN-------LSYKV 374
+LL +C SF L K +H + +R L S+V V + L+ + + N +Y +
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 375 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL 434
F + +N L+ F + +A + QML + PDN TF L+ A + + +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 435 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX-- 492
H ++R GF + V + LV +Y+ CG + A IF +
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 493 ---------------------------XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 525
Y K+ E A+ LF M + GV N+
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 526 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI 585
SV+ +C+H G ++ G +++++K H + L+ T ++D+ R G + A ++ +P
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILG-TALVDMFWRCGDIEKAIHVFEGLP- 311
Query: 586 KPNHAVWGALLGACVSH 602
+ + W +++ H
Sbjct: 312 ETDSLSWSSIIKGLAVH 328
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 201/386 (52%), Gaps = 8/386 (2%)
Query: 284 TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 343
TW L GY + ++ + M G+KPN ++ LL AC SF L G+ +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 344 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
++ + +V V LI +Y C + + KVF + +++ WN++++ + N +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 463
+ F +M+ K PD T LL A +L +H ++ + + LVD+Y
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 464 SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQI 522
+K G L YA +F + ++G E A+ LF++M+ +S V+PN +
Sbjct: 258 AKSGGLEYARLVFE--RMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYV 315
Query: 523 TFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRT 582
TF VL ACSH GLVD+G F M K H+I P++ HY ++D+LGRAG+LN+AY+ I+
Sbjct: 316 TFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKK 375
Query: 583 MPIKPNHAVWGALLGACVSHENVE---LGEVAARWTFELEPENTGNYVLLANLYAAVGRW 639
MP +P+ VW LL AC H + + +GE + ELEP+ +GN V++AN +A W
Sbjct: 376 MPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435
Query: 640 RDAENVRDMVNVVGLRKLPAQSLVEV 665
+A VR ++ ++K+ +S +E+
Sbjct: 436 AEAAEVRRVMKETKMKKIAGESCLEL 461
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 172/353 (48%), Gaps = 13/353 (3%)
Query: 72 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 131
D+ P +WN + R Y P +++ ++ EM G+ P+ T+P ++KAC+ L
Sbjct: 75 DSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGIK-PNKLTFPFLLKACASFLGL 129
Query: 132 DMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGY 191
G + K GFD D +V N+L+ +Y + A+ VFD M E+ VVSWN+++
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL 189
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
N + + M+ PD T+V +L ACG N+ LG+ VH+ V + N
Sbjct: 190 VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC 247
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
+ A++DMY K G ++ A + M + +V TW+ +I G G A AL L M+ E
Sbjct: 248 RLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKE 307
Query: 312 -GVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
V+PN V+ +L AC G ++ G K H K++ +I A++D+ + N
Sbjct: 308 SSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
Query: 370 LSYKVFMKTSKKRTA-PWNALLSGF-IHNSLVREAI-QLFKQMLVKDVQPDNA 419
+Y K + A W LLS IH+ E I + K+ L+ +++P +
Sbjct: 368 EAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLI-ELEPKRS 419
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 35/379 (9%)
Query: 120 IIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQA--QLVFDLMK 177
I +K CS + L + +HG + D+F+ + L+ + + K+ A + +
Sbjct: 18 IFLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSS 74
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
+ T +WN + GY ++ E++ VY+ M G++P+ T +L AC + GR+
Sbjct: 75 DSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQ 134
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGD 297
+ V + GF ++ V N ++ +Y C + +A + +EM E +VV+W +++ + NG
Sbjct: 135 IQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
M+ + P+ ++ LLSACG G+L+ GK +H+ + ++LE + TA
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 358 LIDMYAKCNCGNLSYK--VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK-DV 414
L+DMYAK G L Y VF + K W+A++ G EA+QLF +M+ + V
Sbjct: 253 LVDMYAK--SGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 415 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI------------LVDI 462
+P+ TF +L A + H L+ G+ Y E+ I +VDI
Sbjct: 311 RPNYVTFLGVLCACS-----------HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDI 359
Query: 463 YSKCGSLGYAHHIFNIIPL 481
+ G L A+ +P
Sbjct: 360 LGRAGRLNEAYDFIKKMPF 378
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 122/231 (52%), Gaps = 6/231 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R++ SWN++M V+ G+ + F EMI PD T +++ AC
Sbjct: 170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC-PDETTMVVLLSACG--G 226
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L +G VH +L+ + +L+ MY +G E A+LVF+ M ++ V +W+ MI
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 190 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGF 247
G + AEEAL+++++MM ++ V P+ T + VL AC V+ G + H + K
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
M+ AM+D+ + G++ EA+ +M E D V W TL++ ++ D
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 243/538 (45%), Gaps = 49/538 (9%)
Query: 113 PDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLV 172
PD + +I AC D + L VH + G L + V L++ + + +
Sbjct: 27 PDESHFISLIHACKDTASLRH---VHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 173 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 232
F +E+ N +I G N R E ++R + M+ GV+PD T VL + L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 233 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE----MDETDVVTWTTL 288
LGR +HA + + VR +++DMY K GQ+K A+ + E + + ++ W L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
INGY D A L R M + N S ++L+ G LN K
Sbjct: 203 INGYCRAKDMHMATTLFRSM----PERNSGSWSTLIKGYVDSGELNRAK----------- 247
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
++F +K W L++GF AI + +
Sbjct: 248 ------------------------QLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFE 283
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
ML K ++P+ T ++L A + L + IH Y++ +G + + LVD+Y+KCG
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
L A +F+ + + HG A+ F QM+ SG +P+++ F +VL
Sbjct: 344 LDCAATVFS--NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPN 588
AC ++ VD GL+ F M + I P + HY ++DLLGRAG+LN+A+ L+ MPI P+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 589 HAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVR 646
W AL AC +H+ E ++ EL+PE G+Y+ L +A+ G +D E R
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 32/272 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ +P++++ SW T++ + Q G A++ + EM+ GL P+ +T ++ ACS
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK-PNEYTIAAVLSACSKSG 307
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G+ +HG G LD + +L+ MY GE + A VF M + ++SW MI
Sbjct: 308 ALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQ 367
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G+ + R +A++ + +MM +G +PD ++VL AC V+LG F+
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGL---------NFFD 418
Query: 250 NMVVRNAM----------LDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDA 298
+M + A+ +D+ + G++ EA L M D+ TW L +
Sbjct: 419 SMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGY 478
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSF 330
R A E V NL+ + L CGS+
Sbjct: 479 RRA---------ESVSQNLLELDPEL--CGSY 499
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 231/474 (48%), Gaps = 47/474 (9%)
Query: 235 GREVHALVKEKGFWG--NMVVRNAMLDMYVKCGQMKEAWWLANE--MDETDVVTWTTLIN 290
G+E+HA++ G + NA+ Y G+M A L +E + E D V WTTL++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 350
+ G +++ L M + V+ + VSV L C L + + H A++ + +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 351 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALL-------------------- 390
V V AL+DMY KC + ++F + +K W +L
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 391 -----------SGFIHNSLVREAIQLFKQMLVKDVQPDN-ATFNSLLPAYAVLADLKQAM 438
+G++ RE ++L +M+ + N T S+L A A +L
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 439 NIHCYLIRSGFLYRLE-------VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
+H Y ++ + E V + LVD+Y+KCG++ + ++F + +
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL--MRKRNVVTWNA 322
Query: 492 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
HG G M + +F QM++ V+P+ +TFT+VL ACSH+G+VDEG F L+ +
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFH-SLRFY 380
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 611
+ P VDHY C++DLLGRAG + +A L+R MP+ PN V G+LLG+C H VE+ E
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 612 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
R ++ P NT +L++N+Y A GR A+ +R + G+RK+P S + V
Sbjct: 441 KRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYV 494
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 197/405 (48%), Gaps = 44/405 (10%)
Query: 120 IIIKACSDLSFLDMGVGVHGMTFKAGFDL--DTFVQNSLLAMYMNAGEKEQAQLVFD--L 175
++++ C+ SFL G +H + +G +++ N+L Y ++GE AQ +FD
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 176 MKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+ E+ V W T+++ + R +++++ M VE D +VV + C L+++
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE--------------AW---------W 272
++ H + + G ++ V NA++DMY KCG + E +W W
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 273 --------LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLE-GVKPNLVSVASL 323
+ +EM E + V WT ++ GY+ G R L L M+ G N V++ S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 324 LSACGSFGSLNYGKCLHAWAIRQKL-------ESEVIVETALIDMYAKCNCGNLSYKVFM 376
LSAC G+L G+ +H +A+++++ +V+V TAL+DMYAKC + S VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 377 KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
K+ WNAL SG + R I +F QM +++V+PD+ TF ++L A + + +
Sbjct: 311 LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDE 369
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
L G +++ + +VD+ + G + A + +P+
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 45/337 (13%)
Query: 70 LFDTLP--QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
LFD +P ++ W T++ + + G +++ LFVEM + + D+ + + C+
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEI-DDVSVVCLFGVCAK 123
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS---- 183
L L HG+ K G V N+L+ MY G + + +F+ ++E++VVS
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 184 ---------------------------WNTMINGYFRNNRAEEALRVYNRMM-DAGVEPD 215
W M+ GY E L + M+ G +
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLN 243
Query: 216 CATVVSVLPACGLLKNVELGREVHA-------LVKEKGFWGNMVVRNAMLDMYVKCGQMK 268
T+ S+L AC N+ +GR VH ++ E+ + +++V A++DMY KCG +
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNID 303
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 328
+ + M + +VVTW L +G ++G R + + M+ E VKP+ ++ ++LSAC
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS 362
Query: 329 SFGSLNYG-KCLHAWAIRQKLESEVIVETALIDMYAK 364
G ++ G +C H+ LE +V ++D+ +
Sbjct: 363 HSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGR 398
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 229/467 (49%), Gaps = 36/467 (7%)
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKC-GQMKEAWWLANEMDETDVVTWTTLINGYIL 294
+++HA + + G + V + +L M A+ + ++ + W T+I G+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 295 NGDARSALMLCRVMLLEG--VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
+ A+ + ML VKP ++ S+ A G G G+ LH I++ LE +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 353 IVETALIDMYAKCNCGNLSYKVFM-------------------------------KTSKK 381
+ ++ MY C C ++++F+ + ++
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 382 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
WN+++SGF+ N ++A+ +F++M KDV+PD T SLL A A L +Q IH
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 501
Y++R+ F V + L+D+Y KCG + ++F P +G
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP--KKQLSCWNSMILGLANNGF 339
Query: 502 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 561
E A+ LF+++ +SG++P+ ++F VL AC+H+G V F+ M +++ I P + HYT
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 562 CIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 621
++++LG AG L +A LI+ MP++ + +W +LL AC NVE+ + AA+ +L+P+
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPD 459
Query: 622 NTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRSE 668
T YVLL+N YA+ G + +A R ++ + K S +EV E
Sbjct: 460 ETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 196/415 (47%), Gaps = 40/415 (9%)
Query: 103 VEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMY-M 161
V + S +L N +I CS + L +H K G DT + +LA
Sbjct: 13 VPAMPSSGSLSGNTYLRLIDTQCSTMRELKQ---IHASLIKTGLISDTVTASRVLAFCCA 69
Query: 162 NAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM--DAGVEPDCATV 219
+ + A LVF + + WNT+I G+ R++ E A+ ++ M+ V+P T
Sbjct: 70 SPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTY 129
Query: 220 VSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW-------- 271
SV A G L GR++H +V ++G + +RN ML MYV CG + EAW
Sbjct: 130 PSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIG 189
Query: 272 -----W------------------LANEMDETDVVTWTTLINGYILNGDARSALMLCRVM 308
W L +EM + + V+W ++I+G++ NG + AL + R M
Sbjct: 190 FDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ VKP+ ++ SLL+AC G+ G+ +H + +R + E IV TALIDMY KC C
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
VF KK+ + WN+++ G +N A+ LF ++ ++PD+ +F +L A
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNIIPL 481
A ++ +A L++ ++ + +++V++ G L A + +P+
Sbjct: 370 AHSGEVHRADEFF-RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPV 423
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 32/297 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDL 128
+F + ++ F WNT++R + + P A+++F++M+ S ++ P TYP + KA L
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMN-------------------------- 162
G +HGM K G + D+F++N++L MY+
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 163 -----AGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 217
G +QAQ +FD M ++ VSWN+MI+G+ RN R ++AL ++ M + V+PD
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
T+VS+L AC L E GR +H + F N +V A++DMY KCG ++E +
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
+ + W ++I G NG A+ L + G++P+ VS +L+AC G ++
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 3/224 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +PQR+ SWN+M+ +V+ GR DAL++F EM + PD FT ++ AC+ L
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK-PDGFTMVSLLNACAYLG 272
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ G +H + F+L++ V +L+ MY G E+ VF+ ++ + WN+MI
Sbjct: 273 ASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMIL 332
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G N E A+ +++ + +G+EPD + + VL AC V E L+KEK
Sbjct: 333 GLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Query: 250 NMVVR-NAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLING 291
+ M+++ G ++EA L M E D V W++L++
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 203/419 (48%), Gaps = 42/419 (10%)
Query: 280 TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL-LSACGSFGSLNYGKC 338
T +++ T ++ Y G+ AL L M P V SL L +C + G
Sbjct: 10 TKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+HA +++ S V AL+DMY KC + + K+F + ++ WNA++S + H
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 399 VREAIQLFKQMLVKDVQPDNATFNS----------------------------------- 423
V+EA++L++ M DV P+ ++FN+
Sbjct: 130 VKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 424 -LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
L+ A + + + IH Y R+ ++ S LV+ Y +CGS+ Y +F+ +
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFD--SME 244
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
Y HG E A+ F +M + V P+ I F +VL ACSHAGL DE L
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 543 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH 602
FK M + + DHY+C++D+L R G+ +AY +I+ MP KP WGALLGAC ++
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 603 ENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
+EL E+AAR +EPEN NYVLL +Y +VGR +AE +R + G++ P S
Sbjct: 365 GEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 175/380 (46%), Gaps = 47/380 (12%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLP-DNFTYPIIIKACSDLSFLDMGVGV 137
L S + Y G ALNLF++M HS LP D + + +K+C+ +G V
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQM-HSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
H + K+ F + FV +LL MY A+ +FD + ++ V WN MI+ Y +
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 198 EEALRVYN---------------------------------RMMDAGVEPDCATVVSVLP 224
+EA+ +Y +M++ +P+ T+++++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 225 ACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 284
AC + L +E+H+ + +++ +++ Y +CG + + + M++ DVV
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG----SLNYGKCLH 340
W++LI+ Y L+GDA SAL + M L V P+ ++ ++L AC G +L Y K +
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 341 A-WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP-WNALLSGFIHNSL 398
+ +R + + L+D+ ++ +YKV +K TA W ALL +
Sbjct: 311 GDYGLRASKDH----YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 399 VREAIQLFKQMLVKDVQPDN 418
+ A +++L+ V+P+N
Sbjct: 367 IELAEIAARELLM--VEPEN 384
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 49/342 (14%)
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSV-LPACGLLKNVELGREVH 239
++S ++ Y E+AL ++ +M + P A V S+ L +C LG VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDAR 299
A + F N V A+LDMY KC + A L +E+ + + V W +I+ Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 300 SALMLCRVM-----------LLEGV----------------------KPNLVSVASLLSA 326
A+ L M +++G+ KPNL+++ +L+SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 327 CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK--VFMKTSKKRTA 384
C + G+ K +H++A R +E +++ L++ Y + CG++ Y VF +
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGR--CGSIVYVQLVFDSMEDRDVV 249
Query: 385 PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA--YAVLADLKQAMNIHC 442
W++L+S + + A++ F++M + V PD+ F ++L A +A LAD +A+
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLAD--EAL---V 304
Query: 443 YLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIP 480
Y R Y L + S LVD+ S+ G A+ + +P
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 46/286 (16%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM-----------IHSGLTLPDNFTY 118
LFD +PQR+ WN M+ Y G+ +A+ L+ M I GL ++ +Y
Sbjct: 105 LFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY 164
Query: 119 PII---------------------IKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLL 157
I + ACS + + +H F+ + +++ L+
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLV 224
Query: 158 AMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 217
Y G QLVFD M+++ VV+W+++I+ Y + AE AL+ + M A V PD
Sbjct: 225 EAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVR------NAMLDMYVKCGQMKEAW 271
++VL AC G ALV K G+ +R + ++D+ + G+ +EA+
Sbjct: 285 AFLNVLKACS-----HAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAY 339
Query: 272 WLANEMDETDVV-TWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
+ M E TW L+ G+ A + R +L+ V+P
Sbjct: 340 KVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLM--VEPE 383
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 230/457 (50%), Gaps = 21/457 (4%)
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVK--CGQMKEAWWLANE 276
+V +L C +K + R++H+ V G + + N +L G + A L +
Sbjct: 8 IVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 277 MD-ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV-KPNLVSVASLLSACGSFGSLN 334
D + W LI G+ + ++++ MLL V +P+L + L +C S+
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI- 123
Query: 335 YGKCL--HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSG 392
KCL H IR + IV T+L+ Y+ ++ KVF + + WN ++
Sbjct: 124 -PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 393 FIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYR 452
F H L +A+ ++K+M + V D+ T +LL + A ++ L + +H R R
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----RIACDIR 238
Query: 453 LE----VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
E V++ L+D+Y+KCGSL A +FN + YG HGHG A+S
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFN--GMRKRDVLTWNSMIIGYGVHGHGVEAISF 296
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
F +MV SGV+PN ITF +L CSH GLV EG+ F+ M Q + P V HY C++DL G
Sbjct: 297 FRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 569 RAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVL 628
RAGQL ++ +I + +W LLG+C H N+ELGEVA + +LE N G+YVL
Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 629 LANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
+ ++Y+A + ++R ++ L+ +P S +E+
Sbjct: 417 MTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEI 453
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 2/266 (0%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD+ P S WN ++R + P +++ + M+ S ++ PD FT+ +K+C +
Sbjct: 65 FDSDPSTS--DWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
+ + +HG ++GF D V SL+ Y G E A VFD M + +VSWN MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
+ +AL +Y RM + GV D T+V++L +C + + +G +H + +
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
+ V NA++DMY KCG ++ A + N M + DV+TW ++I GY ++G A+ R M+
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYG 336
GV+PN ++ LL C G + G
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEG 328
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 153/311 (49%), Gaps = 7/311 (2%)
Query: 164 GEKEQAQLVFDLMKEQTVVS-WNTMINGYFRNNRAEEALRVYNRMMDAGV-EPDCATVVS 221
G AQL+FD S WN +I G+ ++ ++ YNRM+ + V PD T
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 222 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 281
L +C +K++ E+H V GF + +V +++ Y G ++ A + +EM D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 282 VVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHA 341
+V+W +I + G AL + + M EGV + ++ +LLS+C +LN G LH
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 342 WAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF-IHNSLVR 400
A + ES V V ALIDMYAKC + VF K+ WN+++ G+ +H V
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV- 291
Query: 401 EAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA--SI 458
EAI F++M+ V+P+ TF LL + +K+ + H ++ S F V
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGC 350
Query: 459 LVDIYSKCGSL 469
+VD+Y + G L
Sbjct: 351 MVDLYGRAGQL 361
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 121/223 (54%), Gaps = 5/223 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P R L SWN M+ + +G + AL+++ M + G+ D++T ++ +C+ +S
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVS 222
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+MGV +H + + FV N+L+ MY G E A VF+ M+++ V++WN+MI
Sbjct: 223 ALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMII 282
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFW 248
GY + EA+ + +M+ +GV P+ T + +L C V+ G E ++ +
Sbjct: 283 GYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLT 342
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWL--ANEMDETDVVTWTTLI 289
N+ M+D+Y + GQ++ + + A+ E D V W TL+
Sbjct: 343 PNVKHYGCMVDLYGRAGQLENSLEMIYASSCHE-DPVLWRTLL 384
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 186/356 (52%), Gaps = 4/356 (1%)
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
+G + ++S + +CG G H A++ S+V + ++L+ +Y
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 371 SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+YKVF + ++ W A++SGF V ++L+ +M P++ TF +LL A
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
L Q ++HC + G L +++ L+ +Y KCG L A IF+
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD--QFSNKDVVSWN 291
Query: 491 XXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
Y +HG A+ LF M+ +SG +P+ IT+ VL +C HAGLV EG F M
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-A 350
Query: 550 QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 609
+H + P ++HY+C++DLLGR G L +A LI MP+KPN +WG+LL +C H +V G
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 610 VAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
AA LEP+ +V LANLYA+VG W++A VR ++ GL+ P S +E+
Sbjct: 411 RAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 164/330 (49%), Gaps = 5/330 (1%)
Query: 114 DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 173
D + +++C G G H + K GF D ++ +SL+ +Y ++GE E A VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 174 DLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVE 233
+ M E+ VVSW MI+G+ + R + L++Y++M + +P+ T ++L AC +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 234 LGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYI 293
GR VH G + + N+++ MY KCG +K+A+ + ++ DVV+W ++I GY
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 294 LNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
+G A A+ L +M+ + G KP+ ++ +LS+C G + G+ L+ E+
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 411
+ L+D+ + + ++ K + W +LL + V I+ ++ L+
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM 418
Query: 412 KDVQPD-NATFNSLLPAYAVLADLKQAMNI 440
++PD AT L YA + K+A +
Sbjct: 419 --LEPDCAATHVQLANLYASVGYWKEAATV 446
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 5/270 (1%)
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
D + S + +CGL ++ G H L + GF ++ + ++++ +Y G+++ A+ +
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
EM E +VV+WT +I+G+ L L M PN + +LLSAC G+L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSG 392
G+ +H + L+S + + +LI MY C CG+L ++++F + S K WN++++G
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMY--CKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 393 FIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
+ + L +AI+LF+ M+ K +PD T+ +L + +K+ + G
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
L S LVD+ + G L A + +P+
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 135/263 (51%), Gaps = 5/263 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ +P+R++ SW M+ + Q R L L+ +M S + P+++T+ ++ AC+
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS-TSDPNDYTFTALLSACTGSG 235
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G VH T G + NSL++MY G+ + A +FD + VVSWN+MI
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 190 GYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
GY ++ A +A+ ++ MM +G +PD T + VL +C V+ GR+ L+ E G
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLC-- 305
+ + ++D+ + G ++EA L M + + V W +L+ ++GD + +
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
Query: 306 RVMLLEGVKPNLVSVASLLSACG 328
R+ML V +A+L ++ G
Sbjct: 416 RLMLEPDCAATHVQLANLYASVG 438
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 195/357 (54%), Gaps = 15/357 (4%)
Query: 313 VKPNLVSVASLLSACGSFGSLN-YGKCLHAWAIR--QKLESEVIVETALIDMYAKCNCGN 369
V+PN + SL A G + +G+ LHA ++ + + + V+ AL+ YA NCG
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYA--NCGK 165
Query: 370 L--SYKVFMKTSKKRTAPWNALLSGFIHNSLV---REAIQLFKQMLVKDVQPDNATFNSL 424
L + +F + + A WN LL+ + ++ + E + LF +M V+P+ + +L
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVAL 222
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
+ + A L + + + H Y++++ V + L+D+YSKCG L +A +F+ +
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD--EMSQR 280
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
HG G+ + L+ ++ G+ P+ TF + ACSH+GLVDEGL +F
Sbjct: 281 DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHEN 604
M + I P V+HY C++DLLGR+G+L +A I+ MP+KPN +W + LG+ +H +
Sbjct: 341 NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD 400
Query: 605 VELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
E GE+A + LE EN+GNYVLL+N+YA V RW D E R+++ + K P S
Sbjct: 401 FERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 22/375 (5%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 180
+I C L L +H G T+ + LL + A + + +
Sbjct: 15 LISKCKSLQNLKQ---IHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPS 70
Query: 181 VVSWNTMINGYFRNNRAEE---ALRVYNRMMDAG---VEPDCATVVSVLPACGLLKNVEL 234
V +NT+I+ N+ + + A +Y++++ + V P+ T S+ A G
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 235 -GREVHALVKE--KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLING 291
GR +HA V + + + V+ A++ Y CG+++EA L + E D+ TW TL+
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 292 YI----LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
Y ++ D L+ R+ V+PN +S+ +L+ +C + G G H + ++
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQ----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFK 407
L V T+LID+Y+KC C + + KVF + S++ + +NA++ G + +E I+L+K
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKC 466
++ + + PD+ATF + A + + + + I + G ++E LVD+ +
Sbjct: 307 SLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRS 366
Query: 467 GSLGYAHHIFNIIPL 481
G L A +P+
Sbjct: 367 GRLEEAEECIKKMPV 381
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 138/274 (50%), Gaps = 14/274 (5%)
Query: 74 LPQRSLFSWNTMMRMYVQ---MGRPHDALNLFVEMI--HSGLTLPDNFTYPIIIKACS-D 127
+P S+F +NT++ V + H A +L+ +++ S P+ FTYP + KA D
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 128 LSFLDMGVGVHG--MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWN 185
+ G +H + F + D FVQ +L+ Y N G+ +A+ +F+ ++E + +WN
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWN 185
Query: 186 TMINGYFRN---NRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
T++ Y + + EE L ++ RM V P+ ++V+++ +C L G H V
Sbjct: 186 TLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYV 242
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSAL 302
+ N V +++D+Y KCG + A + +EM + DV + +I G ++G + +
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 303 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
L + ++ +G+ P+ + +SAC G ++ G
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 10/248 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYV---QMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS 126
LF+ + + L +WNT++ Y ++ + L LF+ M P+ + +IK+C+
Sbjct: 172 LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCA 227
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
+L GV H K L+ FV SL+ +Y G A+ VFD M ++ V +N
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE-K 245
MI G + +E + +Y ++ G+ PD AT V + AC V+ G ++ +K
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVY 347
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD-ARSALM 303
G + ++D+ + G+++EA +M + + W + + +GD R +
Sbjct: 348 GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 304 LCRVMLLE 311
L ++ LE
Sbjct: 408 LKHLLGLE 415
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 195/387 (50%), Gaps = 33/387 (8%)
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSY 372
+KP+ +V L+ AC G +H IR+ +++ V+T LI +YA+ C + +
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 373 KVF-------------MKTSKKRTA------------------PWNALLSGFIHNSLVRE 401
KVF M T+ R WNA++SG+ RE
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 461
A+ +F M ++ V+ + S+L A L L Q H Y+ R+ + +A+ LVD
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVD 283
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQ 521
+Y+KCG + A +F + +G GE + LF+ M Q GV PN
Sbjct: 284 LYAKCGDMEKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNA 341
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 581
+TF SVL CS G VDEG F M + I P ++HY C++DL RAG+L DA ++I+
Sbjct: 342 VTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Query: 582 TMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRD 641
MP+KP+ AVW +LL A ++N+ELG +A++ ELE N G YVLL+N+YA W +
Sbjct: 402 QMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDN 461
Query: 642 AENVRDMVNVVGLRKLPAQSLVEVRSE 668
+VR + G+RK P S++EV E
Sbjct: 462 VSHVRQSMKSKGVRKQPGCSVMEVNGE 488
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 184/370 (49%), Gaps = 38/370 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTL-PDNFTYPIIIKACSDL 128
+ D + +LF+ N+M+R + + P + + + ++ SG L PDN+T +++AC+ L
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQ-------------------- 168
+ G+ VHGMT + GFD D VQ L+++Y G +
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 169 -----------AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 217
A+ +F+ M E+ ++WN MI+GY + + EAL V++ M GV+ +
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 218 TVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM 277
++SVL AC L ++ GR H+ ++ + + ++D+Y KCG M++A + M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 278 DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+E +V TW++ +NG +NG L L +M +GV PN V+ S+L C G ++ G+
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 338 CLHAWAIRQKLESEVIVE--TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH 395
H ++R + E +E L+D+YA+ + + + K P A+ S +H
Sbjct: 362 -RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMK---PHAAVWSSLLH 417
Query: 396 NSLVREAIQL 405
S + + ++L
Sbjct: 418 ASRMYKNLEL 427
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 170/350 (48%), Gaps = 36/350 (10%)
Query: 167 EQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG--VEPDCATVVSVLP 224
+ A + D ++ T+ + N+MI + ++ E++ Y R++ +G ++PD TV ++
Sbjct: 57 DYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQ 116
Query: 225 ACGLLKNVELGREVHALVKEKGF-------------------------------WGNMVV 253
AC L+ E G +VH + +GF + V
Sbjct: 117 ACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVC 176
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
R AM+ +CG + A L M E D + W +I+GY G++R AL + +M LEGV
Sbjct: 177 RTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV 236
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
K N V++ S+LSAC G+L+ G+ H++ R K++ V + T L+D+YAKC + +
Sbjct: 237 KVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
VF +K W++ L+G N + ++LF M V P+ TF S+L +V+
Sbjct: 297 VFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGF 356
Query: 434 LKQAMNIHCYLIRS--GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ + H +R+ G +LE LVD+Y++ G L A I +P+
Sbjct: 357 VDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 228/483 (47%), Gaps = 72/483 (14%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ ++P +++S+++++ + ++ +F M GL +PD+ P + K C++LS
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGL-IPDSHVLPNLFKVCAELS 130
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK------------ 177
+G +H ++ +G D+D FVQ S+ MYM G A+ VFD M
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 178 -----------------------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
E +VSWN +++G+ R+ +EA+ ++ ++ G P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
D TV SVLP+ G + + +GR +H V ++G + V +AM+DMY K G + L
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 275 NEMD-----------------------------------ETDVVTWTTLINGYILNGDAR 299
N+ + E +VV+WT++I G NG
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 300 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
AL L R M + GVKPN V++ S+L ACG+ +L +G+ H +A+R L V V +ALI
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
DMYAKC NLS VF K WN+L++GF + +E + +F+ ++ ++PD
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 478
+F SLL A + + + G RLE S +V++ + G L A+ +
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 479 IPL 481
+P
Sbjct: 551 MPF 553
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 144/277 (51%), Gaps = 13/277 (4%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
++ SW +++ Q G+ +AL LF EM +G+ P++ T P ++ AC +++ L G
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK-PNHVTIPSMLPACGNIAALGHGRST 410
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRA 197
HG + + V ++L+ MY G +Q+VF++M + +V WN+++NG+ + +A
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFWGNMVVRNA 256
+E + ++ +M ++PD + S+L ACG + + G + ++ E+ G + +
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 257 MLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALMLCRVML-LEGVK 314
M+++ + G+++EA+ L EM E D W L+N L + A + + LE
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 315 P-NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 350
P V ++++ +A G + ++ +IR K+ES
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVD--------SIRNKMES 619
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 2/206 (0%)
Query: 340 HAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 399
HA ++ +++ + LI Y+ NC N + V +++L+ L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 400 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASIL 459
++I +F +M + PD+ +L A L+ K IHC SG V +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 460 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 519
+Y +CG +G A +F+ + Y + G E V + ++M SG++
Sbjct: 158 FHMYMRCGRMGDARKVFD--RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 520 NQITFTSVLHACSHAGLVDEGLSLFK 545
N +++ +L + +G E + +F+
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQ 241
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 207/411 (50%), Gaps = 18/411 (4%)
Query: 270 AWWLANEMDETDVVTWTTLINGYILN-GDARSALMLCRVMLLEG-VKPNLVSVASLLSAC 327
A+ + + ++ W TLI + A ML R ML G P+ + +L AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 328 GSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWN 387
+ GK +H ++ +V V LI +Y C C +L+ KVF + ++ WN
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 388 ALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRS 447
+++ + A+QLF++M + +PD T S+L A A L L H +L+R
Sbjct: 222 SMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 448 ---GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM 504
+ V + L+++Y KCGSL A +F + + HG E
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ--GMQKRDLASWNAMILGFATHGRAEE 338
Query: 505 AVSLFNQMV--QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 562
A++ F++MV + V+PN +TF +L AC+H G V++G F M++ + I P ++HY C
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 563 IIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSH-ENVELGEVAARWTFELEPE 621
I+DL+ RAG + +A +++ +MP+KP+ +W +LL AC +VEL E AR + +
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 622 N-------TGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEV 665
N +G YVLL+ +YA+ RW D VR +++ G+RK P S +E+
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 151/274 (55%), Gaps = 7/274 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQ-MGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+FD++ S F WNT++R + R +A L+ +M+ G + PD T+P ++KAC+ +
Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI 164
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
G VH K GF D +V N L+ +Y + G + A+ VFD M E+++VSWN+MI
Sbjct: 165 FGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMI 224
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK--- 245
+ R + AL+++ R M EPD T+ SVL AC L ++ LG HA + K
Sbjct: 225 DALVRFGEYDSALQLF-REMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDV 283
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
+++V+N++++MY KCG ++ A + M + D+ +W +I G+ +G A A+
Sbjct: 284 DVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFF 343
Query: 306 RVML--LEGVKPNLVSVASLLSACGSFGSLNYGK 337
M+ E V+PN V+ LL AC G +N G+
Sbjct: 344 DRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 169/317 (53%), Gaps = 14/317 (4%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDT---FVQNSLLAMYMNAGEKEQAQLVFDLMK 177
+ + CSD+S L +H T + + + F+ +L + + + A VFD ++
Sbjct: 54 LAETCSDMSQLKQ---LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 178 EQTVVSWNTMINGYFRN-NRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELG 235
+ WNT+I + +R EEA +Y +M++ G PD T VL AC + G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
++VH + + GF G++ V N ++ +Y CG + A + +EM E +V+W ++I+ +
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ---KLESEV 352
G+ SAL L R M +P+ ++ S+LSAC GSL+ G HA+ +R+ + +V
Sbjct: 231 GEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
+V+ +LI+MY KC ++ +VF K+ A WNA++ GF + EA+ F +M+ K
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 413 --DVQPDNATFNSLLPA 427
+V+P++ TF LL A
Sbjct: 350 RENVRPNSVTFVGLLIA 366
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 202/392 (51%), Gaps = 14/392 (3%)
Query: 276 EMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
EM E +VV WT++INGY+LN D SA R + ++V +++S G +
Sbjct: 53 EMVEKNVVLWTSMINGYLLNKDLVSA----RRYFDLSPERDIVLWNTMIS-----GYIEM 103
Query: 336 GKCLHAWAIRQKLE-SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 394
G L A ++ ++ +V+ +++ YA +VF ++ WN L+ G+
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 395 HNSLVREAIQLFKQMLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-LYR 452
N V E + FK+M+ + V P++AT +L A A L +H Y G+
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 453 LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQM 512
+ V + L+D+Y KCG++ A +F I HGHG A++LF++M
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIK--RRDLISWNTMINGLAAHGHGTEALNLFHEM 281
Query: 513 VQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 572
SG+ P+++TF VL AC H GLV++GL+ F M I+P ++H C++DLL RAG
Sbjct: 282 KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGF 341
Query: 573 LNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL 632
L A I MP+K + +W LLGA ++ V++GEVA +LEP N N+V+L+N+
Sbjct: 342 LTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNI 401
Query: 633 YAAVGRWRDAENVRDMVNVVGLRKLPAQSLVE 664
Y GR+ DA ++ + G +K S +E
Sbjct: 402 YGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 433
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 46/270 (17%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
FD P+R + WNTM+ Y++MG +A +LF +M C D+
Sbjct: 82 FDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM------------------PCRDV-- 121
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
M++ N++L Y N G+ E + VFD M E+ V SWN +I G
Sbjct: 122 ---------MSW-----------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 191 YFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y +N R E L + RM+D G V P+ AT+ VL AC L + G+ VH + G+
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY-- 219
Query: 250 NMV---VRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCR 306
N V V+NA++DMY KCG ++ A + + D+++W T+ING +G AL L
Sbjct: 220 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
M G+ P+ V+ +L AC G + G
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 121/223 (54%), Gaps = 3/223 (1%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+R++FSWN +++ Y Q GR + L F M+ G +P++ T +++ AC+ L
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 130 FLDMGVGVHGMTFKAGFD-LDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI 188
D G VH G++ +D V+N+L+ MY G E A VF +K + ++SWNTMI
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEKGF 247
NG + EAL +++ M ++G+ PD T V VL AC + VE G +++ +
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLI 289
+ ++D+ + G + +A N+M + D V W TL+
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 21/341 (6%)
Query: 149 DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMM 208
++ Q L M G A VF M E+ VV W +MINGY N A R +
Sbjct: 27 ESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF---- 82
Query: 209 DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM-----LDMYVK 263
D E D VL + +E+G + A + + M R+ M L+ Y
Sbjct: 83 DLSPERDI-----VLWNTMISGYIEMGNMLEA----RSLFDQMPCRDVMSWNTVLEGYAN 133
Query: 264 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVAS 322
G M+ + ++M E +V +W LI GY NG L + M+ EG V PN ++
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 323 LLSACGSFGSLNYGKCLHAWAIRQKLES-EVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
+LSAC G+ ++GK +H + +V V+ ALIDMY KC ++ +VF ++
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 382 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN-I 440
WN +++G + EA+ LF +M + PD TF +L A + ++ +
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 441 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
+ + +E +VD+ S+ G L A N +P+
Sbjct: 314 NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV 354
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 196/385 (50%), Gaps = 7/385 (1%)
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKP-NLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
T+I + L+ L R + P N +S + L C G L G +H
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 346 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 405
S+ ++ T L+D+Y+ C + KVF + K+ T WN L S ++ N R+ + L
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 406 FKQM---LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 462
F +M + V+PD T L A A L L +H ++ +G L +++ LV +
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSM 261
Query: 463 YSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQI 522
YS+CGS+ A+ +F + +G G+ A+ FN+M++ G+ P +
Sbjct: 262 YSRCGSMDKAYQVF--YGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 523 TFTSVLHACSHAGLVDEGLSLFKFMLK-QHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 581
T T +L ACSH+GLV EG+ F M + +I P + HY C++DLLGRA L+ AY+LI+
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 582 TMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRD 641
+M +KP+ +W LLGAC H +VELGE EL+ E G+YVLL N Y+ VG+W
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 642 AENVRDMVNVVGLRKLPAQSLVEVR 666
+R ++ + P S +E++
Sbjct: 440 VTELRSLMKEKRIHTKPGCSAIELQ 464
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 5/263 (1%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDLSFLDMGVG 136
+L NTM+R + P + LF + + +LP N + +K C L G+
Sbjct: 76 TLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNS-SLPANPLSSSFALKCCIKSGDLLGGLQ 134
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
+HG F GF D+ + +L+ +Y A VFD + ++ VSWN + + Y RN R
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 197 AEEALRVYNRM---MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
+ L ++++M +D V+PD T + L AC L ++ G++VH + E G G + +
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNL 254
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
N ++ MY +CG M +A+ + M E +VV+WT LI+G +NG + A+ ML G+
Sbjct: 255 SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI 314
Query: 314 KPNLVSVASLLSACGSFGSLNYG 336
P ++ LLSAC G + G
Sbjct: 315 SPEEQTLTGLLSACSHSGLVAEG 337
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIH--SGLTLPDNFTYPIIIKACSD 127
+FD +P+R SWN + Y++ R D L LF +M + G PD T + ++AC++
Sbjct: 170 VFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 128 LSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTM 187
L LD G VH + G + N+L++MY G ++A VF M+E+ VVSW +
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I+G N +EA+ +N M+ G+ P+ T+ +L AC V G ++ F
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEF 349
Query: 248 --WGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
N+ ++D+ + + +A+ L M+ + D W TL+ ++GD
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGD 402
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 203/362 (56%), Gaps = 9/362 (2%)
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGN 369
E + P+ ++ L+ AC + GK +H W ++ + S+ V+T ++ +Y +
Sbjct: 110 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 169
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ KVF + + W+ L++G++ L E +++F++MLVK ++PD + + L A A
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 430 VLADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ L Q IH ++ + ++ + V + LVD+Y+KCG + A +F L
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK--KLTRRNVFS 287
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y +G+ + A++ ++ + G++P+ + VL AC+H G ++EG S+ + M
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+++I P +HY+CI+DL+ RAG+L+DA NLI MP+KP +VWGALL C +H+NVEL
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 608 GEVAARWTFELEP----ENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
GE+A + +LE E V L+N+Y +V R +A VR M+ G+RK P S++
Sbjct: 408 GELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVL 467
Query: 664 EV 665
EV
Sbjct: 468 EV 469
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 167/332 (50%), Gaps = 11/332 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL--TLPDNFTYPIIIKACSD 127
+FD++ + F ++TM+R+ + +PH L F+ M+ P T+ +I AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 128 LSFLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
F +G +H K G F D+ VQ +L +Y+ A+ VFD + + VV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
++NGY R E L V+ M+ G+EPD +V + L AC + + G+ +H VK+K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 247 FW-GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM-L 304
+ ++ V A++DMY KCG ++ A + ++ +V +W LI GY G A+ A+ L
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC-LHAWAIRQKLESEVIVETALIDMYA 363
R+ +G+KP+ V + +L+AC G L G+ L R ++ + + ++D+
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM- 367
Query: 364 KCNCGNL--SYKVFMKTSKKRTAP-WNALLSG 392
C G L + + K K A W ALL+G
Sbjct: 368 -CRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 212/416 (50%), Gaps = 40/416 (9%)
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL-SACGSFGSLNYGKCLHAWA 343
+ TLI Y+ G+ +++L L ML V+PN ++ SL+ +AC SF S++YG LH A
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSF-SVSYGVALHGQA 112
Query: 344 IRQKLESEVIVETALIDMYAK---------------------CN-----CG-----NLSY 372
+++ + V+T+ + Y + CN CG + ++
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 373 KVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD---VQPDNATFNSLLPAYA 429
+ F + W +++GF L +A+ +F +M+ + + P+ ATF S+L + A
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 430 VL--ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
++ IH Y++ + + + L+D+Y K G L A IF+ I
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI--RDKKVC 290
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+G + A+ +F M S V PN IT ++L AC+ + LVD G+ LF +
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+++IIP +HY C++DL+GRAG L DA N I+++P +P+ +V GALLGAC HEN EL
Sbjct: 351 CSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTEL 410
Query: 608 GEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
G + L+P++ G YV L+ A W +AE +R + G+RK+PA S++
Sbjct: 411 GNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 39/284 (13%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGVHGM 140
+NT++R Y+ G +L LF M+ S + P+N T+P +IKA CS S + GV +HG
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQ-PNNLTFPSLIKAACSSFS-VSYGVALHGQ 111
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-------------------------- 174
K GF D FVQ S + Y G+ E ++ +FD
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 175 -----LMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD---AGVEPDCATVVSVLPAC 226
M VVSW T+ING+ + +AL V+ M+ A + P+ AT VSVL +C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 227 GLLKN--VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVT 284
+ LG+++H V K + A+LDMY K G ++ A + +++ + V
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 328
W +I+ NG + AL + +M V PN +++ ++L+AC
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 179 QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV 238
+T +NT+I Y + +L ++ M+ + V+P+ T S++ A +V G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 239 HALVKEKGF-WGNMV----VR--------------------------NAMLDMYVKCGQM 267
H ++GF W V VR N++LD + G+M
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 268 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG---VKPNLVSVASLL 324
A+ M TDVV+WTT+ING+ G ALM+ M+ + PN + S+L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 325 SACGSF--GSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKR 382
S+C +F G + GK +H + + +++ + TAL+DMY K ++ +F + K+
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 383 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
WNA++S N ++A+++F+ M V P+ T ++L A A
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 4/169 (2%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHS--GLTLPDNFTYPIIIKACS-- 126
F +P + SW T++ + + G AL +F EMI + + P+ T+ ++ +C+
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 127 DLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
D + +G +HG L T + +LL MY AG+ E A +FD ++++ V +WN
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+I+ N R ++AL ++ M + V P+ T++++L AC K V+LG
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 40/258 (15%)
Query: 381 KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 440
K +N L+ ++ + ++ LF ML VQP+N TF SL+ A + + +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 441 HCYLIRSGFLYRLEVASILV-----------------DIYSKC--------------GSL 469
H ++ GFL+ V + V DI + C G +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 470 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG---VQPNQITFTS 526
YA F +P+ + K G A+ +F +M+Q+ + PN+ TF S
Sbjct: 169 DYAFEYFQRMPV--TDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 527 VLHACSH--AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
VL +C++ G + G + +++ + +II T ++D+ G+AG L A + +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 585 IKPNHAVWGALLGACVSH 602
K A W A++ A S+
Sbjct: 286 DKKVCA-WNAIISALASN 302
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 173/308 (56%), Gaps = 6/308 (1%)
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VKDVQP 416
+I+ K L+ KV S + WN ++ G++ N EA++ K ML D++P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+ +F S L A A L DL A +H +I SG ++S LVD+Y+KCG +G + +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ + HG A+ +F++M V P+ ITF +L CSH GL
Sbjct: 224 --YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL 596
++EG F M ++ I P ++HY ++DLLGRAG++ +AY LI +MPI+P+ +W +LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 597 GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
+ +++N ELGE+A + L +G+YVLL+N+Y++ +W A+ VR++++ G+RK
Sbjct: 342 SSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 657 LPAQSLVE 664
+S +E
Sbjct: 399 AKGKSWLE 406
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 117/240 (48%), Gaps = 24/240 (10%)
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML-LEGV 313
N +++ +K G+ A + + +V+TW +I GY+ N AL + ML +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
KPN S AS L+AC G L++ K +H+ I +E I+ +AL+D+YAKC S +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
VF + + WNA+++GF + L EAI++F +M + V PD+ TF LL +
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS---- 277
Query: 434 LKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
HC L+ G Y +LE +VD+ + G + A+ + +P+
Sbjct: 278 -------HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI 330
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
Query: 154 NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD-AGV 212
N ++ M GE A+ V +Q V++WN MI GY RN + EEAL+ M+ +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 213 EPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW 272
+P+ + S L AC L ++ + VH+L+ + G N ++ +A++D+Y KCG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 273 LANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 332
+ + DV W +I G+ +G A A+ + M E V P+ ++ LL+ C G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 333 LNYGK 337
L GK
Sbjct: 282 LEEGK 286
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 2/216 (0%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
+++ +WN M+ YV+ + +AL M+ P+ F++ + AC+ L L
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNR 196
VH + +G +L+ + ++L+ +Y G+ ++ VF +K V WN MI G+ +
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK-GFWGNMVVRN 255
A EA+RV++ M V PD T + +L C +E G+E L+ + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 256 AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 290
AM+D+ + G++KEA+ L M E DVV W +L++
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 201/433 (46%), Gaps = 7/433 (1%)
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
RE + G+M NA + + + + +T+ + T + G +
Sbjct: 32 REFQTEASQTSASGSMFSGNATTILRRMLAEKRIGRFQVENQRKTEKLDKT--LKGLCVT 89
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
G + A+ L + G++ + A LL C GK +HA ++
Sbjct: 90 GRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLK 146
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
L+ +YA + +F + PWNA++SG++ L +E + ++ M +
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
PD TF S+ A + L L+ H +I+ + V S LVD+Y KC S H +
Sbjct: 207 PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRV 266
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
F+ L YG HG + F +M + G +PN +TF VL AC+H G
Sbjct: 267 FD--QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGG 324
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGAL 595
LVD+G F M + + I P HY ++D LGRAG+L +AY + P K + VWG+L
Sbjct: 325 LVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSL 384
Query: 596 LGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLR 655
LGAC H NV+L E+AA EL+P N GNYV+ AN YA+ G A VR + G++
Sbjct: 385 LGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVK 444
Query: 656 KLPAQSLVEVRSE 668
K P S +E++ E
Sbjct: 445 KDPGYSQIELQGE 457
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 161/323 (49%), Gaps = 8/323 (2%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F QR + ++ GR +A+ L + SGL + TY ++++ C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPE-TYAVLLQECKQRKE 123
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMING 190
G +H F GF L+ +++ LL +Y +G+ + A ++F +K + ++ WN MI+G
Sbjct: 124 YTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISG 183
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
Y + +E L +Y M + PD T SV AC L +E G+ HA++ ++ N
Sbjct: 184 YVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN 243
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
++V +A++DMY KC + + +++ +V+TWT+LI+GY +G L M
Sbjct: 244 IIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE 303
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK--LESEVIVETALIDMYAKCNCG 368
EG +PN V+ +L+AC G ++ G H +++++ +E E A++D +
Sbjct: 304 EGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 369 NLSYKVFMKTSKKRTAP-WNALL 390
+Y+ MK+ K P W +LL
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLL 385
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 173 FDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 232
F + ++ + + G R +EA+ + + +G++ + T +L C K
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 233 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGY 292
G+ +HA + GF N ++ +L +Y G ++ A L + D++ W +I+GY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 293 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
+ G + L + M + P+ + AS+ AC + L +GK HA I++ ++S +
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
IV++AL+DMY KC+ + ++VF + S + W +L+SG+ ++ V E ++ F++M +
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 413 DVQPDNATFNSLLPA 427
+P+ TF +L A
Sbjct: 305 GCRPNPVTFLVVLTA 319
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF +L R L WN M+ YVQ G + L ++ +M + + +PD +T+ + +ACS L
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI-VPDQYTFASVFRACSALD 223
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L+ G H + K + V ++L+ MY VFD + + V++W ++I+
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE-VHALVKEKGFW 248
GY + + E L+ + +M + G P+ T + VL AC V+ G E +++ ++ G
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIE 343
Query: 249 GNMVVRNAMLDMYVKCGQMKEAW-WLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
AM+D + G+++EA+ ++ + W +L+ ++G+ + L L
Sbjct: 344 PEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK-LLELAAT 402
Query: 308 MLLEGVKP----NLVSVASLLSACG 328
LE + P N V A+ ++CG
Sbjct: 403 KFLE-LDPTNGGNYVVFANGYASCG 426
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 202/362 (55%), Gaps = 9/362 (2%)
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL-ESEVIVETALIDMYAKCNCGN 369
E + P+ ++ L+ AC + GK +H W ++ + S+ V+T ++ +Y +
Sbjct: 110 EDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLF 169
Query: 370 LSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ KVF + + W+ L++G++ L E +++FK+MLV+ ++PD + + L A A
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 430 VLADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXX 488
+ L Q IH ++ + ++ + V + LVD+Y+KCG + A +F L
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE--KLTRRNVFS 287
Query: 489 XXXXXXXYGKHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y +G+ + A + +++ + G++P+ + VL AC+H G ++EG ++ + M
Sbjct: 288 WAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENM 347
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
++ I P +HY+CI+DL+ RAG+L+DA +LI MP+KP +VWGALL C +H+NVEL
Sbjct: 348 EARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 608 GEVAARWTFELEP----ENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
GE+A + +LE E V L+N+Y +V R +A VR M+ G+RK P SL+
Sbjct: 408 GELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLL 467
Query: 664 EV 665
EV
Sbjct: 468 EV 469
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 164/332 (49%), Gaps = 11/332 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGL--TLPDNFTYPIIIKACSD 127
+FD++ + F ++TM+R+ + +PH L F+ M+ P T+ +I AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 128 LSFLDMGVGVHGMTFKAG-FDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
F +G +H K G F D VQ +L +Y+ A+ VFD + + VV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKG 246
++NGY R E L V+ M+ G+EPD +V + L AC + + G+ +H VK+K
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 247 FW-GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM-L 304
+ ++ V A++DMY KCG ++ A + ++ +V +W LI GY G A+ A L
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKC-LHAWAIRQKLESEVIVETALIDMYA 363
R+ +G+KP+ V + +L+AC G L G+ L R + + + ++D+
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM- 367
Query: 364 KCNCGNL--SYKVFMKTSKKRTAP-WNALLSG 392
C G L + + K K A W ALL+G
Sbjct: 368 -CRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 228/491 (46%), Gaps = 80/491 (16%)
Query: 184 WNTMINGYFRNNRAEE---ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 240
WN +I N + + + VY RM + V PD T +LP+ ++ LG+ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARS 300
+ G + VR ++L+MY C GD RS
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSC-------------------------------GDLRS 115
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
A RV G K L AW ++++
Sbjct: 116 AQ---RVFDDSGSKD-----------------------LPAW-------------NSVVN 136
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD-----VQ 415
YAK + + K+F + ++ W+ L++G++ +EA+ LF++M + V+
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVR 196
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
P+ T +++L A L L+Q +H Y+ + + + + L+D+Y+KCGSL A +
Sbjct: 197 PNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQS-GVQPNQITFTSVLHACSHA 534
FN + +G + LF++M S + PN +TF +L AC H
Sbjct: 257 FNALG-SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHR 315
Query: 535 GLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGA 594
GL++EG S FK M+++ I P + HY C++DL GR+G + +A + I +MP++P+ +WG+
Sbjct: 316 GLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGS 375
Query: 595 LLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGL 654
LL +++ E A + EL+P N+G YVLL+N+YA GRW + + +R + V G+
Sbjct: 376 LLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGI 435
Query: 655 RKLPAQSLVEV 665
K+P S VEV
Sbjct: 436 NKVPGCSYVEV 446
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 168/398 (42%), Gaps = 77/398 (19%)
Query: 80 FSWNTMMRMYVQ-MGRP--HDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
F WN ++R V + P H +++++ M + ++ PD T+P ++ + + L +G
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVS-PDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMI-------- 188
H G D D FV+ SLL MY + G+ AQ VFD + + +WN+++
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 189 -----------------------NGYFRNNRAEEALRVYNRMM-----DAGVEPDCATVV 220
NGY + +EAL ++ M +A V P+ T+
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 221 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM-DE 279
+VL ACG L +E G+ VHA + + ++V+ A++DMY KCG ++ A + N + +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 280 TDVVTWTTLINGYILNGDARSALMLCRVMLL-EGVKPNLVSVASLLSACGSFGSLNYGKC 338
DV ++ +I + G L M + + PN V+ +L AC G +N GK
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 339 LHAWAIRQ-KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNS 397
I + + + ++D+Y + +
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGR-------------------------------SG 352
Query: 398 LVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
L++EA M ++PD + SLL +L D+K
Sbjct: 353 LIKEAESFIASM---PMEPDVLIWGSLLSGSRMLGDIK 387
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 125/239 (52%), Gaps = 8/239 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM----IHSGLTLPDNFTYPIIIKAC 125
LFD +P+R++ SW+ ++ YV G+ +AL+LF EM + P+ FT ++ AC
Sbjct: 150 LFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSAC 209
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVSW 184
L L+ G VH K ++D + +L+ MY G E+A+ VF+ L ++ V ++
Sbjct: 210 GRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAY 269
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDA-GVEPDCATVVSVLPACGLLKNVELGRE-VHALV 242
+ MI +E ++++ M + + P+ T V +L AC + G+ ++
Sbjct: 270 SAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAW-WLANEMDETDVVTWTTLINGYILNGDARS 300
+E G ++ M+D+Y + G +KEA ++A+ E DV+ W +L++G + GD ++
Sbjct: 330 EEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 388
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 186/352 (52%), Gaps = 38/352 (10%)
Query: 348 LESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIH---------- 395
ES V V+TAL+ MY GN+ ++KVF + ++ WN +++G +
Sbjct: 154 FESHVYVQTALVGMYLVG--GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 396 -----NSLV----------------REAIQLFKQMLVKD-VQPDNATFNSLLPAYAVLAD 433
N V +EAI LF +M+ D ++P+ T ++LPA L D
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 434 LKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
LK ++H Y+ + GF+ + V + L+D Y+KCG + A F IP
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG-LSLFKFMLKQH 551
+ HG G+ AVS+F M + G++PN++T SVL+ACSH GL +E L F M+ ++
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEY 391
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 611
+I P V HY C++D+L R G+L +A + +PI+ VW LLGAC +++ EL E
Sbjct: 392 KITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERV 451
Query: 612 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
R ELE + G+YVL++N++ GR+ DA+ R ++V G+ KLP S V
Sbjct: 452 TRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 175/330 (53%), Gaps = 47/330 (14%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLF--VEMIH----SGLTLP--DNFTYPIIIKACSDLSF 130
LF +N ++R Y P A L+ ++ +H +LP D+FTY ++KA S+ F
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 131 --LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE---------- 178
L +G+G+HG+T K GF+ +VQ +L+ MY+ G A VFD M E
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 179 ---------------------QTVVSWNTMINGYFRNNRAEEALRVYNRMMDA-GVEPDC 216
+TVVSW T+I+GY R ++ +EA+ +++RM+ ++P+
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWG-NMVVRNAMLDMYVKCGQMKEAWWLAN 275
T++++LPA L ++++ VHA V ++GF ++ V N+++D Y KCG ++ A+
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 276 EMD--ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC--GSFG 331
E+ ++V+WTT+I+ + ++G + A+ + + M G+KPN V++ S+L+AC G
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLA 376
Query: 332 SLNYGKCLHAWAIRQKLESEVIVETALIDM 361
+ + + K+ +V L+DM
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDM 406
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 6/246 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ +P R++ SW T++ Y ++ +P +A+ LF M+ P+ T I+ A +L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 130 FLDMGVGVHGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK--EQTVVSWNT 186
L M VH K GF D V NSL+ Y G + A F + + +VSW T
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC--GLLKNVELGREVHALVKE 244
MI+ + + +EA+ ++ M G++P+ T++SVL AC G L E + +V E
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSALM 303
++ ++DM + G+++EA +A E+ E V W L+ + DA A
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 304 LCRVML 309
+ R ++
Sbjct: 451 VTRKLM 456
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 25/241 (10%)
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALML-CRVM 308
N V N M+ G ++A +M VV+WTT+I+GY + A++L R++
Sbjct: 188 NPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV 247
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW-AIRQKLESEVIVETALIDMYAKCNC 367
+ +KPN +++ ++L A + G L +HA+ R + ++ V +LID YAKC C
Sbjct: 248 ACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGC 307
Query: 368 GNLSYKVFMK--TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT----- 420
++K F++ +K W ++S F + + +EA+ +FK M ++P+ T
Sbjct: 308 IQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVL 367
Query: 421 ----------------FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
FN+++ Y + D+K + L R G L E ++ + I
Sbjct: 368 NACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEE 427
Query: 465 K 465
K
Sbjct: 428 K 428
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 196/388 (50%), Gaps = 8/388 (2%)
Query: 277 MDETDVVTWTTLINGYILNGDARSALMLCRVMLLEG-VKPNLVSVASLLSACGSFGSLNY 335
M ++ +W +I + +G A ++ L M E V+P+ ++ +L AC +
Sbjct: 93 MPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS 152
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGF 393
G +H ++ S + V +AL+ MY + G L + K+F + + + A+ G+
Sbjct: 153 GDLIHVLCLKLGFSSSLFVSSALVIMYV--DMGKLLHARKLFDDMPVRDSVLYTAMFGGY 210
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 453
+ + +F++M D+ SLL A L LK ++H + IR L
Sbjct: 211 VQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGL 270
Query: 454 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 513
+ + + D+Y KC L YAH +F + + YG G M+ LF++M+
Sbjct: 271 NLGNAITDMYVKCSILDYAHTVF--VNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 514 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQL 573
+ G++PN +TF VL AC+H GLV++ F+ M +++ I+P + HY + D + RAG L
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLL 387
Query: 574 NDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLY 633
+A + MP+KP+ AV GA+L C + NVE+GE AR +L+P YV LA LY
Sbjct: 388 EEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY 447
Query: 634 AAVGRWRDAENVRDMVNVVGLRKLPAQS 661
+A GR+ +AE++R + + K+P S
Sbjct: 448 SAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 140/262 (53%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F +P R++FSWN ++ + + G +++LF+ M PD+FT P+I++ACS
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G +H + K GF FV ++L+ MY++ G+ A+ +FD M + V + M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY + A L ++ M +G D +VS+L ACG L ++ G+ VH +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ + NA+ DMYVKC + A + M DV++W++LI GY L+GD + L ML
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 310 LEGVKPNLVSVASLLSACGSFG 331
EG++PN V+ +LSAC G
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGG 350
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 192/395 (48%), Gaps = 28/395 (7%)
Query: 172 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM-MDAGVEPDCATVVSVLPACGLLK 230
VF M + + SWN +I + R+ A +++ ++ RM ++ V PD T+ +L AC +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
+ G +H L + GF ++ V +A++ MYV G++ A L ++M D V +T +
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES 350
GY+ G+A L + R M G + V + SLL ACG G+L +GK +H W IR+
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 351 EVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML 410
+ + A+ DMY KC+ + ++ VF+ S++ W++L+ G+ + V + +LF +ML
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 411 VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY-----------RLEVASIL 459
+ ++P+ TF +L A A H L+ +LY L+ + +
Sbjct: 329 KEGIEPNAVTFLGVLSACA-----------HGGLVEKSWLYFRLMQEYNIVPELKHYASV 377
Query: 460 VDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQP 519
D S+ G L A +P+ +G+ E+ + +++Q ++P
Sbjct: 378 ADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC-KVYGNVEVGERVARELIQ--LKP 434
Query: 520 NQITFTSVLHAC-SHAGLVDEGLSLFKFMLKQHQI 553
+ ++ L S AG DE SL ++M K+ QI
Sbjct: 435 RKASYYVTLAGLYSAAGRFDEAESLRQWM-KEKQI 468
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 230/473 (48%), Gaps = 38/473 (8%)
Query: 222 VLPACG-LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
+L AC ++ V LG+ +H+ + G +++V ++++ MY KCG + A + +EM E
Sbjct: 51 ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 281 DVVTWTTLINGYILNGDARSA------LMLCR--VMLLEGVKPNLVSVASLLSACGSFGS 332
+V TW +I GY+ NGDA A + +CR V +E +K + + A F
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRI-EIEKARELFER 169
Query: 333 LNYG-KCLHAWAI-------RQKLES-----------EVIVETALIDMYAKCNCGNLSYK 373
+ + K + AW++ +K+E V + ++ Y + + +
Sbjct: 170 MPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARA 229
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
+F + + WN L++G+ N +AI F M + +PD T +S+L A A
Sbjct: 230 IFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXX 493
L +H + G V++ L+D+Y+KCG L A +F I +
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISC 349
Query: 494 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 553
HG G+ A+ +F+ M ++P++ITF +VL AC H G + EGL +F M K +
Sbjct: 350 LAI--HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDV 406
Query: 554 IPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 613
P V H+ C+I LLGR+G+L +AY L++ M +KPN V GALLGAC H + E+ E +
Sbjct: 407 KPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK 466
Query: 614 WTFELEPENTGNY-----VLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQS 661
E T +Y ++NLYA RW+ AE +R + GL K P S
Sbjct: 467 -IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 179/378 (47%), Gaps = 35/378 (9%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACS-DLSFLDMGVGVH 138
F + +++ ++ G P AL L+ + G+ P P+I++AC+ + + +G +H
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLH 69
Query: 139 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAE 198
+ K G D V +SL++MY G A+ VFD M E+ V +WN MI GY N A
Sbjct: 70 SESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAV 129
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-------------------- 238
A ++ + V + T + ++ G +E RE+
Sbjct: 130 LASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGV 186
Query: 239 ----HALVKEKGFWGNMVVRNA-----MLDMYVKCGQMKEAWWLANEMDETDVVTWTTLI 289
+ + F+ ++ +NA M+ Y + G + EA + + D+V W TLI
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 290 NGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLE 349
GY NG + A+ M EG +P+ V+V+S+LSAC G L+ G+ +H+ + +E
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 350 SEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
V ALIDMYAKC + VF S + A N+++S + +EA+++F M
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 410 LVKDVQPDNATFNSLLPA 427
D++PD TF ++L A
Sbjct: 367 ESLDLKPDEITFIAVLTA 384
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 176/404 (43%), Gaps = 75/404 (18%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEM---------------------IHS 108
+FD +P+R++ +WN M+ Y+ G A LF E+ I
Sbjct: 103 VFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEK 162
Query: 109 GLTLPDNFTYPII-IKACSDLSFLDMGVGVHGMT-------FKAGFDLDTFVQNSLLAMY 160
L + + + +KA S + +GV V+ F+ + + FV + +++ Y
Sbjct: 163 ARELFERMPFELKNVKAWSVM----LGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGY 218
Query: 161 MNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVV 220
G+ +A+ +F + + +V WNT+I GY +N +++A+ + M G EPD TV
Sbjct: 219 FRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVS 278
Query: 221 SVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET 280
S+L AC +++GREVH+L+ +G N V NA++DMY KCG ++ A + +
Sbjct: 279 SILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
Query: 281 DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLH 340
V ++I+ ++G + AL + M +KP+ ++ ++L+AC G L G
Sbjct: 339 SVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG---- 394
Query: 341 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIH----N 396
K+F + + P IH +
Sbjct: 395 -------------------------------LKIFSEMKTQDVKPNVKHFGCLIHLLGRS 423
Query: 397 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI 440
++EA +L K+M VK P++ +LL A V D + A +
Sbjct: 424 GKLKEAYRLVKEMHVK---PNDTVLGALLGACKVHMDTEMAEQV 464
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 43/334 (12%)
Query: 286 TTLINGYILNGDARSALMLCRVMLLEGVK-PNLVSVASLLSACGSF-GSLNYGKCLHAWA 343
+ LI +I G AL+L + GV P V + +L AC + GK LH+ +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSES 72
Query: 344 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAI 403
I+ + S+V+V ++LI MY KC C + KVF + ++ A WNA++ G++ N A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF-LYRLEVASILVDI 462
LF+++ V + T+ ++ Y ++++A + R F L ++ S+++ +
Sbjct: 133 GLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKAREL---FERMPFELKNVKAWSVMLGV 186
Query: 463 YSKCGSLGYAHHIFNIIP-----------------------------LXXXXXXXXXXXX 493
Y + A F IP +
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 494 XXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQI 553
Y ++G+ + A+ F M G +P+ +T +S+L AC+ +G +D G + + H+
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI--NHRG 304
Query: 554 IPLVDHYT-CIIDLLGRAGQLNDAYNLIRTMPIK 586
I L + +ID+ + G L +A ++ ++ ++
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVR 338
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 175/324 (54%), Gaps = 6/324 (1%)
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
E V+ TA++ YA+ + + +F ++ WNA+L+ N L EA+ LF++
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 409 MLVK-DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
M+ + ++P+ T +L A A L+ A IH + R + V++ LVD+Y KCG
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ---SGVQPNQITF 524
+L A +F + + HG E A+++F +M++ + ++P+ ITF
Sbjct: 310 NLEEASSVFKMA--SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 525 TSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP 584
+L+AC+H GLV +G F M + I P ++HY C+IDLLGRAG+ ++A ++ TM
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
+K + A+WG+LL AC H +++L EVA + L P N G ++ANLY +G W +A
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARR 487
Query: 645 VRDMVNVVGLRKLPAQSLVEVRSE 668
R M+ K P S +E+ +E
Sbjct: 488 ARKMIKHQNAYKPPGWSRIEIDNE 511
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 40/335 (11%)
Query: 97 DALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSL 156
A + F M++ + P++F YP+++K+ LS VH FK+GF L VQ +L
Sbjct: 108 SAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTAL 167
Query: 157 LAMYMNA-GEKEQAQLVFDLMKEQTVVSWNTMINGYFR---------------------- 193
L Y ++ A+ +FD M E+ VVSW M++GY R
Sbjct: 168 LHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSW 227
Query: 194 ---------NNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVK 243
N EA+ ++ RM+ + + P+ TVV VL AC ++L + +HA
Sbjct: 228 NAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAY 287
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM 303
+ ++ V N+++D+Y KCG ++EA + + + W ++IN + L+G + A+
Sbjct: 288 RRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIA 347
Query: 304 LCRVML---LEGVKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALI 359
+ M+ + +KP+ ++ LL+AC G ++ G+ R +E + LI
Sbjct: 348 VFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLI 407
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRT--APWNALLSG 392
D+ + + + +V M T K + A W +LL+
Sbjct: 408 DLLGRAGRFDEALEV-MSTMKMKADEAIWGSLLNA 441
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 129/251 (51%), Gaps = 13/251 (5%)
Query: 229 LKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTL 288
+ ++ L R++ + E+ N+V AML Y + G + A L +M E DV +W +
Sbjct: 175 VSHITLARQLFDEMSER----NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAI 230
Query: 289 INGYILNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
+ NG A+ L R M+ E ++PN V+V +LSAC G+L K +HA+A R+
Sbjct: 231 LAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD 290
Query: 348 LESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 405
L S+V V +L+D+Y K CGNL + VF SKK WN++++ F + EAI +
Sbjct: 291 LSSDVFVSNSLVDLYGK--CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAV 348
Query: 406 FKQML---VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI-RSGFLYRLEVASILVD 461
F++M+ + D++PD+ TF LL A + + + R G R+E L+D
Sbjct: 349 FEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLID 408
Query: 462 IYSKCGSLGYA 472
+ + G A
Sbjct: 409 LLGRAGRFDEA 419
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 5/232 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF+ +P+R + SWN ++ Q G +A++LF MI+ P+ T ++ AC+
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L + G+H ++ D FV NSL+ +Y G E+A VF + ++++ +WN+MIN
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Query: 190 GYFRNNRAEEALRVYNRMMDAG---VEPDCATVVSVLPACGLLKNVELGREVHALVKEK- 245
+ + R+EEA+ V+ MM ++PD T + +L AC V GR L+ +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNG 296
G + ++D+ + G+ EA + + M + D W +L+N ++G
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 209/389 (53%), Gaps = 14/389 (3%)
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEG------VKPNLVSVASLLSACGSFGSLNYGKC 338
W +I G+ + A R ML + + + ++ + L AC +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 339 LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
LH R+ L ++ ++ T L+D Y+K +YK+F + + A WNAL++G + +
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNI-HCYLIRSGFLYRLEVAS 457
EA++L+K+M + ++ T + L A + L D+K+ NI H Y + + V++
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN-----VIVSN 245
Query: 458 ILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGV 517
+D+YSKCG + A+ +F + HG A+ +F+++ +G+
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFT-GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
Query: 518 QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY 577
+P+ +++ + L AC HAGLV+ GLS+F M + + + HY C++DLL RAG+L +A+
Sbjct: 305 KPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAH 363
Query: 578 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVG 637
++I +M + P+ +W +LLGA + +VE+ E+A+R E+ N G++VLL+N+YAA G
Sbjct: 364 DIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQG 423
Query: 638 RWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
RW+D VRD + ++K+P S +E +
Sbjct: 424 RWKDVGRVRDDMESKQVKKIPGLSYIEAK 452
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 12/274 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHS-----GLTLPDNFTYPIIIKA 124
+F +P+ WN ++R + P A + + M+ + D T +KA
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 125 CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSW 184
C+ +H + G D+ + +LL Y G+ A +FD M + V SW
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREV-HALVK 243
N +I G NRA EA+ +Y RM G+ TVV+ L AC L +V+ G + H
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN 238
Query: 244 EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARSAL 302
+ N++V NA +DMY KCG + +A+ + + + VVTW T+I G+ ++G+A AL
Sbjct: 239 D-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 303 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
+ + G+KP+ VS + L+AC G + YG
Sbjct: 294 EIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 160/350 (45%), Gaps = 18/350 (5%)
Query: 144 AGFDLDTFVQNSLLAMYMNA--GEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEAL 201
AG +F+++ LL + G+ A +F + + WN +I G+ ++ A
Sbjct: 29 AGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAF 88
Query: 202 RVYNRMMD------AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
Y M+ A D T L AC ++H + +G + ++
Sbjct: 89 SWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCT 148
Query: 256 AMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
+LD Y K G + A+ L +EM DV +W LI G + A A+ L + M EG++
Sbjct: 149 TLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRR 208
Query: 316 NLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
+ V+V + L AC G + G+ H ++ VIV A IDMY+KC + +Y+V
Sbjct: 209 SEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQV 263
Query: 375 FMK-TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
F + T KK WN +++GF + A+++F ++ ++PD+ ++ + L A
Sbjct: 264 FEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGL 323
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF---NIIP 480
++ +++ + G ++ +VD+ S+ G L AH I ++IP
Sbjct: 324 VEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP 373
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 9/247 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P R + SWN ++ V R +A+ L+ M G+ + T + ACS L
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSE-VTVVAALGACSHLG 224
Query: 130 FLDMGVGV-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD-LMKEQTVVSWNTM 187
+ G + HG + + + V N+ + MY G ++A VF+ +++VV+WNTM
Sbjct: 225 DVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I G+ + A AL +++++ D G++PD + ++ L AC VE G V + KG
Sbjct: 280 ITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET-DVVTWTTLINGYILNGDARSALMLCR 306
NM ++D+ + G+++EA + M D V W +L+ + D A + R
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASR 399
Query: 307 VMLLEGV 313
+ GV
Sbjct: 400 EIKEMGV 406
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 215/444 (48%), Gaps = 36/444 (8%)
Query: 261 YVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSV 320
++ ++ A + +E+ E DV++ T +I ++ A + +L G++PN +
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 321 ASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTS- 379
+++ + + + GK LH +A++ L S V V +A+++ Y K + + + F T
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 380 ------------------------------KKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
++ WNA++ GF EA+ F M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 410 LVKDVQ-PDNATFNSLLPAYAVLADLKQAMNIH-CYLIRSGFLYRLEVASILVDIYSKCG 467
L + V P+ +TF + A + +A +IH C + G + + V + L+ YSKCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQ-SGVQPNQITFTS 526
++ + FN + Y +G GE AV++F +MV+ + ++PN +T
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 527 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD--HYTCIIDLLGRAGQLNDAYNLIRTMP 584
VL AC+HAGL+ EG F + + L++ HY C++D+L R+G+ +A LI++MP
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 396
Query: 585 IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
+ P W ALLG C H N L ++AA EL+P + +YV+L+N Y+A+ W++
Sbjct: 397 LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 456
Query: 645 VRDMVNVVGLRKLPAQSLVEVRSE 668
+R + GL++ S +EVR +
Sbjct: 457 IRRKMKETGLKRFTGCSWIEVRDQ 480
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 139/275 (50%), Gaps = 32/275 (11%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF +P+RS+ +WN ++ + Q GR +A+N FV+M+ G+ +P+ T+P I A S+++
Sbjct: 181 LFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIA 240
Query: 130 FLDMGVGVHGMTFK-AGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ--TVVSWNT 186
G +H K G + FV NSL++ Y G E + L F+ ++E+ +VSWN+
Sbjct: 241 SHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNS 300
Query: 187 MINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHA-LVKE 244
MI GY N R EEA+ ++ +M+ D + P+ T++ VL AC HA L++E
Sbjct: 301 MIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN-----------HAGLIQE 349
Query: 245 KGFWGNMVVRN-------------AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLIN 290
+ N V + M+DM + G+ KEA L M + + W L+
Sbjct: 350 GYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLG 409
Query: 291 GYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS 325
G ++ + R A + +L + P VS +LS
Sbjct: 410 GCQIHSNKRLAKLAASKIL--ELDPRDVSSYVMLS 442
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 171/378 (45%), Gaps = 67/378 (17%)
Query: 157 LAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 216
L ++++ A VFD + E V+S +I + + +R EA + + R++ G+ P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 276
T +V+ + ++V+LG+++H + G N+ V +A+L+ YVK + +A ++
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 277 MDETDVVTWTTLINGYILNGDARSALMLCRV----------------------------- 307
+ +VV+ T LI+GY+ + AL L R
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 308 --MLLEGVK-PNLVSVASLLSACGSFGSLNYGKCLHAWAIR-QKLESEVIVETALIDMYA 363
ML EGV PN + ++A + S GK +HA AI+ V V +LI Y+
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 364 KCNCGNLSYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD--VQPD 417
K CGN+ + ++ ++ WN+++ G+ HN EA+ +F++M VKD ++P+
Sbjct: 274 K--CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPN 330
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY--------------RLEVASILVDIY 463
N T +L A H LI+ G++Y LE + +VD+
Sbjct: 331 NVTILGVLFACN-----------HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDML 379
Query: 464 SKCGSLGYAHHIFNIIPL 481
S+ G A + +PL
Sbjct: 380 SRSGRFKEAEELIKSMPL 397
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 145/303 (47%), Gaps = 37/303 (12%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD +P+ + S ++ +V+ R +A F ++ G+ P+ FT+ +I + +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIR-PNEFTFGTVIGSSTTSR 107
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNS-------------------------------LLA 158
+ +G +H K G + FV ++ L++
Sbjct: 108 DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 159 MYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE-PDCA 217
Y+ E E+A +F M E++VV+WN +I G+ + R EEA+ + M+ GV P+ +
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES 227
Query: 218 TVVSVLPACGLLKNVELGREVHAL-VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 276
T + A + + G+ +HA +K G N+ V N+++ Y KCG M+++ N+
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 277 MDET--DVVTWTTLINGYILNGDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSL 333
++E ++V+W ++I GY NG A+ + M+ + ++PN V++ +L AC G +
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLI 347
Query: 334 NYG 336
G
Sbjct: 348 QEG 350
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 214/433 (49%), Gaps = 33/433 (7%)
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL 324
G + A+ +++ + W +I G+ + + ++ + ML G+ P+ ++ L+
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 325 SACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY---------------------- 362
+ + G LH ++ LE ++ + LI MY
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 363 -------AKCNCGNL--SYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQML-VK 412
A G++ + VF + S++ W++++ G++ +A+++F QM+ +
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
+ + T S++ A A L L + +H Y++ + + + L+D+Y+KCGS+G A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
+F + HG ++ LF++M +S + P++ITF +L ACS
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVW 592
H GLV E FK LK+ P +HY C++D+L RAG + DA++ I MPIKP ++
Sbjct: 356 HGGLVKEAWHFFK-SLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML 414
Query: 593 GALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVV 652
GALL C++H N+EL E + EL+P N G YV LAN+YA ++R A ++R+ +
Sbjct: 415 GALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKK 474
Query: 653 GLRKLPAQSLVEV 665
G++K+ S++++
Sbjct: 475 GVKKIAGHSILDL 487
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 35/368 (9%)
Query: 149 DTFVQNSL-LAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRM 207
+ FV +L + ++G+ + A + + WN +I G+ + E+++ VY +M
Sbjct: 40 EPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQM 99
Query: 208 MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQM 267
+ G+ PD T ++ + L N +LG +H V + G ++ + N ++ MY
Sbjct: 100 LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQ 159
Query: 268 KEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC---------------------- 305
A L +EM ++VTW ++++ Y +GD SA ++
Sbjct: 160 ASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRG 219
Query: 306 ----------RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
++M + K N V++ S++ AC G+LN GK +H + + L VI++
Sbjct: 220 EYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ 279
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAP--WNALLSGFIHNSLVREAIQLFKQMLVKD 413
T+LIDMYAKC ++ VF + S K T WNA++ G + +RE++QLF +M
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
+ PD TF LL A + +K+A + L SG + E + +VD+ S+ G + AH
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 474 HIFNIIPL 481
+ +P+
Sbjct: 400 DFISEMPI 407
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 197/410 (48%), Gaps = 49/410 (11%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
+ WN ++R + P +++++++M+ GL LPD+ TYP ++K+ S LS +G +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGL-LPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 140 MTFKAGFDLDTFVQNSLLAM-------------------------------YMNAGEKEQ 168
K+G + D F+ N+L+ M Y +G+
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 169 AQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG-VEPDCATVVSVLPACG 227
A+LVFD M E+ VV+W++MI+GY + +AL ++++MM G + + T+VSV+ AC
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 228 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW--WLANEMDETDVVTW 285
L + G+ VH + + ++++ +++DMY KCG + +AW + + ETD + W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 286 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
+I G +G R +L L M + P+ ++ LL+AC G + AW
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK-----EAWHFF 367
Query: 346 QKL-----ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPW-NALLSGFIHNSLV 399
+ L E + ++D+ ++ ++ + K T ALL+G I++ +
Sbjct: 368 KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNL 427
Query: 400 REAIQLFKQMLVKDVQPDN-ATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
A + K+++ ++QP N + L YA+ + A ++ + + G
Sbjct: 428 ELAETVGKKLI--ELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 475
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYK 373
+LV+ + L C S L +H I L E + + A + G++ +YK
Sbjct: 7 SLVAKSILRHQCKSMSELYK---IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYK 63
Query: 374 VFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLAD 433
K S WN ++ GF ++ ++I ++ QML + PD+ T+ L+ + + L++
Sbjct: 64 FLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSN 123
Query: 434 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP------------- 480
K ++HC +++SG + L + + L+ +Y A +F+ +P
Sbjct: 124 RKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDA 183
Query: 481 ----------------LXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG-VQPNQIT 523
+ Y K G A+ +F+QM++ G + N++T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 524 FTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL-VDHYTCIIDLLGRAGQLNDAYNLIRT 582
SV+ AC+H G ++ G ++ +++L H +PL V T +ID+ + G + DA+++
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVH--LPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 583 MPIKPNHAV-WGALLGACVSH 602
+K A+ W A++G SH
Sbjct: 302 ASVKETDALMWNAIIGGLASH 322
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + +R + +W++M+ YV+ G + AL +F +M+ G + + T +I AC+ L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF--DLMKEQTVVSWNTM 187
L+ G VH L +Q SL+ MY G A VF +KE + WN +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I G + E+L+++++M ++ ++PD T + +L AC V+ +KE G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
M+D+ + G +K+A +EM + T + G +LNG
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMP----IKPTGSMLGALLNG 420
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 199/393 (50%), Gaps = 22/393 (5%)
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL-----SACGSFGSLNYGKCLHAWA 343
+ Y+ +G+ AL+ R + P+ V S+L S+ SL+ G+ +HA
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALV 91
Query: 344 IRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRT-APWNALLSGFIHNSLVREA 402
+ + + ++T+L+ Y+ + + +VF +T +K+ W A++S + N EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG--FLYRLEVASILV 460
I+LFK+M + ++ D L A A L ++ I+ I+ L + + L+
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 461 DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV------Q 514
++Y K G A +F+ Y +G + ++ LF +M
Sbjct: 212 NMYVKSGETEKARKLFD--ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
+ + PN +TF VL ACSH+GLV+EG FK M+ + + P H+ C++DL R+G L
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 575 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYA 634
DA+ I MPIKPN +W LLGAC H NVELGE R FEL+ ++ G+YV L+N+YA
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 635 AVGRWRDAENVRDMVNVVGLRKLPAQSLVEVRS 667
+ G W + +RD V R++P +S +E+ S
Sbjct: 390 SKGMWDEKSKMRDRVRK---RRMPGKSWIELGS 419
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 138/266 (51%), Gaps = 12/266 (4%)
Query: 83 NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFT--YPIIIKACSDLSFLDMGVGVHGM 140
N ++ Y++ G P AL F + D+F+ + I + + S LD G +H +
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE-QTVVSWNTMINGYFRNNRAEE 199
K GF+ +Q SL+ Y + G+ + A+ VFD E Q +V W MI+ Y N + E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA--LVKEKGFWGNMVVRNAM 257
A+ ++ RM +E D V L AC L V++G E+++ + +++ ++ +RN++
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 258 LDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL------E 311
L+MYVK G+ ++A L +E DV T+T++I GY LNG A+ +L L + M
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGK 337
+ PN V+ +L AC G + GK
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGK 296
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 12/239 (5%)
Query: 70 LFDTLPQR-SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDL 128
+FD P++ ++ W M+ Y + +A+ LF M + L D + + AC+DL
Sbjct: 122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL-DGVIVTVALSACADL 180
Query: 129 SFLDMGVGVHGMTFKAGFDL--DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT 186
+ MG ++ + K L D ++NSLL MY+ +GE E+A+ +FD + V ++ +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 187 MINGYFRNNRAEEALRVYNRM------MDAGVEPDCATVVSVLPACGLLKNVELG-REVH 239
MI GY N +A+E+L ++ +M D + P+ T + VL AC VE G R
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGD 297
+++ + M+D++ + G +K+A N+M + + V W TL+ L+G+
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 242/531 (45%), Gaps = 86/531 (16%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++ ++F N+M + + +M +D L L+ + G+ +PD F++P++IK+
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGI-MPDAFSFPVVIKSAGRF- 119
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G+ + K GF D +V+N ++ MY+ E A+ VFD + ++ WN MI+
Sbjct: 120 ----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
GY++ EEA ++++ M E D + ++ +K++E R+
Sbjct: 176 GYWKWGNKEEACKLFDMM----PENDVVSWTVMITGFAKVKDLENARKYF---------- 221
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVML 309
+ M E VV+W +++GY NG AL L ML
Sbjct: 222 -------------------------DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN--- 366
GV+PN + ++SAC + + L +++ V+TAL+DM+AKC
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 367 ---------------------------CGNLS--YKVFMKTSKKRTAPWNALLSGFIHNS 397
G++S ++F K+ WN+L++G+ HN
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 398 LVREAIQLFKQML-VKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 456
AI+ F+ M+ D +PD T S+L A +ADL+ I Y+ ++
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 457 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSG 516
L+ +Y++ G+L A +F+ + + +G G ++L ++M G
Sbjct: 437 RSLIFMYARGGNLWEAKRVFD--EMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG 494
Query: 517 VQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
++P+++T+TSVL AC+ AGL+ EG +FK + PL DHY C +DLL
Sbjct: 495 IEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 215/489 (43%), Gaps = 68/489 (13%)
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWW---L 273
+T V +L K++ ++ HA + + G + + + ++ + K + +
Sbjct: 37 STPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSI 96
Query: 274 ANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 333
N + + T ++I Y + AL + R MLL V P+ S +L AC +F
Sbjct: 97 LNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 156
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV------------------- 374
G+ +H I+ L ++V VE L+++Y + ++ KV
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAY 216
Query: 375 ------------FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDV-------- 414
F + ++ WN ++SG+ LV+EA ++F M V+DV
Sbjct: 217 LEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVT 276
Query: 415 ------------------------QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 450
+PD T S+L A A L L Q +H Y+ + G
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE 336
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
+A+ LVD+YSKCG + A +F HG G+ A+ +F+
Sbjct: 337 IEGFLATALVDMYSKCGKIDKALEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRA 570
+MV G +PN ITF VL AC+H G++D+ LF+ M +++ P ++HY C++DLLGR
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 571 GQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLA 630
G++ +A L+ +P + +LLGAC +E E A EL ++ Y ++
Sbjct: 455 GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Query: 631 NLYAAVGRW 639
NLYA+ GRW
Sbjct: 515 NLYASDGRW 523
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 48/406 (11%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
F+ N+++R Y P AL +F EM+ G PD +++ ++KAC+ + G +HG
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEE 199
+ K+G D FV+N+L+ +Y +G E A+ V D M + VSWN++++ Y +E
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDE 224
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 259
A +++ M + VE W N M+
Sbjct: 225 ARALFDEMEERNVES---------------------------------W------NFMIS 245
Query: 260 MYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGV-KPNLV 318
Y G +KEA + + M DVV+W ++ Y G L + ML + KP+
Sbjct: 246 GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGF 305
Query: 319 SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKT 378
++ S+LSAC S GSL+ G+ +H + + +E E + TAL+DMY+KC + + +VF T
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
SK+ + WN+++S + L ++A+++F +M+ + +P+ TF +L A + L QA
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQAR 425
Query: 439 NIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIFNIIP 480
+ + +YR+E +VD+ + G + A + N IP
Sbjct: 426 KLFEMM---SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 119/228 (52%), Gaps = 15/228 (6%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD++P R + SWN M+ Y +G ++ L +F +M+ PD FT ++ AC+ L
Sbjct: 259 VFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G VH K G +++ F+ +L+ MY G+ ++A VF ++ V +WN++I+
Sbjct: 319 SLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIIS 378
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLL----KNVELGREVHALV 242
+ ++AL +++ M+ G +P+ T + VL AC G+L K E+ V+ +
Sbjct: 379 DLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVE 438
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM--DETDVVTWTTL 288
+G MV D+ + G+++EA L NE+ DE ++ + L
Sbjct: 439 PTIEHYGCMV------DLLGRMGKIEEAEELVNEIPADEASILLESLL 480
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 15/225 (6%)
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS---KCGSLGYAHHIFNIIPLXXXXXX 487
L +++QA H +++++G + AS LV + + ++ YAH I N I
Sbjct: 52 LTEIQQA---HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRI--GSPNGF 106
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y E+A+++F +M+ V P++ +FT VL AC+ +EG +
Sbjct: 107 THNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 607
+K + + T ++++ GR+G A ++ MP++ + W +LL A + V+
Sbjct: 167 IKSGLVTDVFVENT-LVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSAYLEKGLVD- 223
Query: 608 GEVAARWTF-ELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNV 651
AR F E+E N ++ + + YAA G ++A+ V D + V
Sbjct: 224 ---EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPV 265
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 155/306 (50%), Gaps = 6/306 (1%)
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQ 408
+ +V+ LID K + ++F + WN+L+SG+ + REAI+LF +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M+ ++PDN S L A A D ++ IH Y R +A+ LVD Y+KCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
+ A IF + HG+GE+ V F +MV SG++P+ +TF SVL
Sbjct: 300 IDTAMEIFELCS--DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI--- 585
CSH+GLVDE +LF M + + + HY C+ DLLGRAG + +A +I MP
Sbjct: 358 VGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGG 417
Query: 586 -KPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAEN 644
+ W LLG C H N+E+ E AA L PE+ G Y ++ +YA RW +
Sbjct: 418 NREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVK 477
Query: 645 VRDMVN 650
VR++++
Sbjct: 478 VREIID 483
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 37/305 (12%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHD--ALNLFVEMIHSGLTLPDNFTYPIIIKACSD 127
+F + S F +NT++R+ + P + FVEM + PD T+P + KAC+
Sbjct: 70 VFRFITNPSTFCFNTIIRI-CTLHEPSSLSSKRFFVEMRRRSVP-PDFHTFPFVFKACAA 127
Query: 128 LSFLDMGV--GVHGMTFKAGFDLDTFVQNSLLAMY------------------------- 160
D+ + +H + G D F N+L+ +Y
Sbjct: 128 KKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 161 ------MNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEP 214
+ A E +A+ +FD M + +VSWN++I+GY + N EA+++++ M+ G++P
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 215 DCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
D +VS L AC + + G+ +H K K + + + ++D Y KCG + A +
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
+ + TW +I G ++G+ + R M+ G+KP+ V+ S+L C G ++
Sbjct: 308 ELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 335 YGKCL 339
+ L
Sbjct: 368 EARNL 372
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 19/240 (7%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD++P R L SWN+++ Y QM +A+ LF EM+ GL PDN + AC+
Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK-PDNVAIVSTLSACAQSG 263
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
G +H T + +D+F+ L+ Y G + A +F+L ++T+ +WN MI
Sbjct: 264 DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT 323
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC---GLLKNV----ELGREVHALV 242
G + E + + +M+ +G++PD T +SVL C GL+ + R ++ +
Sbjct: 324 GLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM-----DETDVVTWTTLINGYILNGD 297
+E +G M D+ + G ++EA + +M + ++ W+ L+ G ++G+
Sbjct: 384 REMKHYG------CMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGN 437
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 145/351 (41%), Gaps = 49/351 (13%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNA---------GEKE---Q 168
++K C L L H +G + F QNS+ A + A KE
Sbjct: 10 LLKLCRTLKHLHQ---FHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY 66
Query: 169 AQLVFDLMKEQTVVSWNTMIN-GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 227
A VF + + +NT+I + + R + M V PD T V AC
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 228 LLKNVELG--REVHALVKEKGFWGNM-------------------------------VVR 254
KN +L + +H G ++ V
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 255 NAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
N ++D VK ++ A L + M D+V+W +LI+GY R A+ L M+ G+K
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
P+ V++ S LSAC G GK +H + R++L + + T L+D YAKC + + ++
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 375 FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
F S K WNA+++G + + F++M+ ++PD TF S+L
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 186/353 (52%), Gaps = 29/353 (8%)
Query: 333 LNYGKCLHAWAIRQKL--ESEVIVETALIDMYAKCNCGNLSY--KVFMKTSKKRTAPWNA 388
L G+ +H + ESE+I T L+ YAK G+L Y KVF + ++ + WNA
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELI-GTTLLHFYAKN--GDLRYARKVFDEMPERTSVTWNA 183
Query: 389 LLSGFI-------HNSLVREAIQLFKQMLV--KDVQPDNATFNSLLPAYAVLADLKQAMN 439
++ G+ HN+ R+A+ LF++ V+P + T +L A + L+
Sbjct: 184 MIGGYCSHKDKGNHNA--RKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 440 IHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
+H Y+ + GF ++V + LVD+YSKCG L A +F ++ +
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLAL- 300
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
+G G +L N+M +SG++PN+ITFTS+L A H GLV+EG+ LFK M + + P++
Sbjct: 301 -NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVI 359
Query: 558 DHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 617
+HY CI+DLLG+AG++ +AY I MPIKP+ + +L AC + +GE + E
Sbjct: 360 EHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 618 LEPENTG-------NYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLV 663
+E E+ +YV L+N+ A G+W + E +R + ++ P S V
Sbjct: 420 IEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 134/271 (49%), Gaps = 18/271 (6%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMI-HSGLTLPDNFTYPIII---KACSDLSFLDMGV 135
F +NT+++ +P D++ +F S L + T+ ++ + S L +G
Sbjct: 76 FLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGR 131
Query: 136 GVHGMTFKAGFDLDT-FVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFR- 193
VHGM K GF ++ + +LL Y G+ A+ VFD M E+T V+WN MI GY
Sbjct: 132 IVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSH 191
Query: 194 ----NNRAEEALRVYNRM--MDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
N+ A +A+ ++ R +GV P T+V VL A +E+G VH +++ GF
Sbjct: 192 KDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGF 251
Query: 248 WG--NMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLC 305
++ + A++DMY KCG + A+ + M +V TWT++ G LNG L
Sbjct: 252 TPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLL 311
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
M G+KPN ++ SLLSA G + G
Sbjct: 312 NRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 15/263 (5%)
Query: 232 VELGREVHALVKEKGF-WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLIN 290
+ +GR VH +VK+ GF + + ++ +L Y K G ++ A + +EM E VTW +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 291 GYILNGD-----ARSALMLCRVMLL--EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWA 343
GY + D AR A++L R GV+P ++ +LSA G L G +H +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 344 IRQKL----ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV 399
+KL E +V + TAL+DMY+KC C N ++ VF K W ++ +G N
Sbjct: 247 --EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 400 REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYL-IRSGFLYRLEVASI 458
E L +M ++P+ TF SLL AY + +++ + + + R G +E
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 459 LVDIYSKCGSLGYAHHIFNIIPL 481
+VD+ K G + A+ +P+
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPI 387
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 12/240 (5%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMG-----RPHDALNLFVEMIHSGLTL-PDNFTYPIIIK 123
+FD +P+R+ +WN M+ Y A+ LF G + P + T ++
Sbjct: 169 VFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLS 228
Query: 124 ACSDLSFLDMGVGVHGMTFKAGF--DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 181
A S L++G VHG K GF ++D F+ +L+ MY G A VF+LMK + V
Sbjct: 229 AISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNV 288
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
+W +M G N R E + NRM ++G++P+ T S+L A + VE G E+
Sbjct: 289 FTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKS 348
Query: 242 VKEKGFWGNMVVRN--AMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDA 298
+K + F V+ + ++D+ K G+++EA+ M + D + +L N + G+
Sbjct: 349 MKTR-FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGET 407
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 175 bits (444), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 36/413 (8%)
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQK 347
+ Y+++ + AL +L G P+ + SL+S ++ GK H AI+
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREA----- 402
+ + V+ +L+ MY C +L+ K+F++ K+ WN++++G + N V A
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 403 --------------------------IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
I LF++M+ Q + +T LL A A LK+
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
++H LIR+ + + + L+D+Y KC +G A IF+ L +
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFD--SLSIRNKVTWNVMILAH 326
Query: 497 GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL 556
HG E + LF M+ ++P+++TF VL C+ AGLV +G S + M+ + QI P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 557 VDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAAR 613
H C+ +L AG +A ++ +P + P W LL + N LGE A+
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 614 WTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKLPAQSLVEVR 666
E +P N Y LL N+Y+ GRW D VR+MV + ++P LV+++
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 32/299 (10%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVH 138
L+ N + + Y+ P AL + +++ G +PD++T+ +I +D G H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGF-VPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 139 GMTFKAGFDLDTFVQNSLLAMYMNAGEKE------------------------------- 167
G K G D VQNSL+ MY G +
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 168 QAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACG 227
A +FD M ++ ++SWN MI+ Y N ++ ++ M+ AG + + +T+V +L ACG
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 228 LLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTT 287
++ GR VHA + ++V+ A++DMY KC ++ A + + + + VTW
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 288 LINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
+I + L+G L L M+ ++P+ V+ +L C G ++ G+ ++ + +
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 177/431 (41%), Gaps = 68/431 (15%)
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE 244
N + Y ++ ++AL Y ++ G PD T VS++ V+ G+ H +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSA--- 301
G + V+N+++ MY CG + A L E+ + D+V+W ++I G + NGD +A
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 302 ----------------------------LMLCRVMLLEGVKPNLVSVASLLSACGSFGSL 333
+ L R M+ G + N ++ LL+ACG L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 334 NYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGF 393
G+ +HA IR L S V+++TALIDMY KC L+ ++F S + WN ++
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 394 IHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRL 453
+ ++LF+ M+ ++PD TF +L A + Q + +
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY------------ 374
Query: 454 EVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMV 513
S++VD + + G+ + N+ Y G E A +
Sbjct: 375 ---SLMVDEFQIKPNFGHQWCMANL-----------------YSSAGFPEEAEEALKNLP 414
Query: 514 QSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPL-VDHYTCIIDLLGRAGQ 572
V P + ++L + G G S+ K +++ PL +Y ++++ G+
Sbjct: 415 DEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETD---PLNYKYYHLLMNIYSVTGR 471
Query: 573 LNDAYNLIRTM 583
D N +R M
Sbjct: 472 WEDV-NRVREM 481
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LFD +P +++ SWN M+ Y+ P +++LF EM+ +G ++ T +++ AC +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNES-TLVLLLNACGRSA 264
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
L G VH + + + +L+ MY E A+ +FD + + V+WN MI
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL-VKEKGFW 248
+ + R E L ++ M++ + PD T V VL C V G+ ++L V E
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV----VTWTTLINGYILNGD 297
N + M ++Y G +EA + + DV W L++ G+
Sbjct: 385 PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 32/299 (10%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+F+ L S F+WN M+R +P +AL LF+ M+ S + D FT+P +IKAC S
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMIN 189
+ +G VHG+ KAGF D F QN+L+ +Y G+ + + VFD M +++VSW TM+
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 190 G-------------------------------YFRNNRAEEALRVYNRMMDAGVEPDCAT 218
G Y +N R +EA +++ RM V+P+ T
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 219 VVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD 278
+V++L A L ++ +GR VH + GF + + A++DMY KCG +++A + + M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 279 ETDVVTWTTLINGYILNGDARSAL-MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG 336
+ TW ++I ++G AL + + V+P+ ++ +LSAC + G++ G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 181/386 (46%), Gaps = 35/386 (9%)
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILN 295
+++H + + + ++ ++ + G+ + A + N++ TW +I +N
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 296 GDARSALMLCRVMLLE-GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIV 354
R AL+L +M++ + + + ++ AC + S+ G +H AI+ ++V
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 355 ETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLV--------------- 399
+ L+D+Y KC + KVF K + W +L G + NS +
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 400 ----------------REAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
EA QLF++M V DV+P+ T +LL A L L +H Y
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
++GF+ + + L+D+YSKCGSL A +F++ + G HG GE
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV--MQGKSLATWNSMITSLGVHGCGE 334
Query: 504 MAVSLF-NQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 562
A+SLF ++ V+P+ ITF VL AC++ G V +GL F M++ + I P+ +H C
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNAC 394
Query: 563 IIDLLGRAGQLNDAYNLIRTMPIKPN 588
+I LL +A ++ A NL+ +M P+
Sbjct: 395 MIQLLEQALEVEKASNLVESMDSDPD 420
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 167/359 (46%), Gaps = 36/359 (10%)
Query: 121 IIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT 180
++ CS+ S L +H K D + L+++ + GE + A LVF+ ++ +
Sbjct: 26 FLRTCSNFSQLKQ---IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVH 239
+WN MI N++ EAL ++ MM + D T V+ AC ++ LG +VH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCG-------------------------------QMK 268
L + GF+ ++ +N ++D+Y KCG Q+
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 269 EAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACG 328
A + N+M +VV+WT +I Y+ N A L R M ++ VKPN ++ +LL A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 329 SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
GSL+ G+ +H +A + + + TALIDMY+KC + KVF K A WN+
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 389 LLSGFIHNSLVREAIQLF-KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
+++ + EA+ LF + V+PD TF +L A A ++K + +I+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 138/610 (22%), Positives = 268/610 (43%), Gaps = 104/610 (17%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDN-FTYPIIIKACSDLSFLDM 133
P S+ ++ ++ +M + ++L +M L +P N +TY I+I S L +
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSILINCFCRRSQLPL 134
Query: 134 GVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMIN 189
+ V G K G++ + +SLL Y ++ +A + D M + V++NT+I+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
G F +N+A EA+ + +RM+ G +PD T G V+ L K
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVT---------------YGVVVNGLCKR----- 234
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLC 305
G A+ L N+M+ E V+ + T+I+G AL L
Sbjct: 235 ---------------GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
+ M +G++PN+V+ +SL+S ++G + L + I +K+ +V +ALID + K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 366 NCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
+ K++ + K+ P +++L++GF + + EA Q+F+ M+ K PD T+
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
N+L+ + +++ M + + + G + +IL+ +F
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI------------QGLF----- 442
Query: 482 XXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
+ G +MA +F +MV GV PN +T+ ++L G +++ +
Sbjct: 443 ----------------QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL-G 597
+F++ L++ ++ P + Y +I+ + +AG++ D ++L + +KP+ + ++ G
Sbjct: 487 VVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 598 ACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGLRKL 657
C E + + N+G Y L R RD G R+
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR-----ARLRD-----------GDREA 589
Query: 658 PAQSLVEVRS 667
A+ + E+RS
Sbjct: 590 SAELIKEMRS 599
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/568 (21%), Positives = 231/568 (40%), Gaps = 50/568 (8%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
+L ++N ++ ++ +MG P + + VE + S PD +TY +I C S V
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 193
AGF D N+LL +Y + ++A V + M ++V++N++I+ Y R
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
+ +EA+ + N+M + G +PD T ++L VE + ++ G N+
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTW------------------------ 285
NA + MY G+ E + +E++ D+VTW
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 286 -----------TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
TLI+ Y G A+ + R ML GV P+L + ++L+A G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 394
+ + A + + + +L+ YA L + + + P LL +
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 395 ----HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFL 450
L+ EA + F ++ + PD T NS++ Y + +A + Y+ GF
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 451 YRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM--AVSL 508
+ + L+ ++S+ G + I I Y + M A +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
F++M SG+ P+ IT+ + + + + + +E + + ++M+K H P + Y I+D
Sbjct: 722 FSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYC 780
Query: 569 RAGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ + ++A + + HA G L
Sbjct: 781 KLNRKDEAKLFVEDLRNLDPHAPKGEDL 808
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 199/470 (42%), Gaps = 19/470 (4%)
Query: 145 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRA-EE 199
GF LD + SL++ + N+G +A VF M+E T++++N ++N + + +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 200 ALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLD 259
+ +M G+ PD T +++ C + +V +K GF + V NA+LD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 260 MYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
+Y K + KEA + NEM +VT+ +LI+ Y +G A+ L M +G KP
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
++ + +LLS G + + + + A I MY K+F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 376 MKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
+ + +P WN LL+ F N + E +FK+M P+ TFN+L+ AY+
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
+QAM ++ ++ +G L + ++ ++ G + + +
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 492 XXXXYGKHGHGEMAV--SLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLK 549
+ E+ + SL ++ ++P + +++ CS L+ E F LK
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFS-ELK 621
Query: 550 QHQIIPLVDHYTCIIDLLGR---AGQLNDAYNLIRTMPIKPNHAVWGALL 596
+ P + ++ + GR + N + ++ P+ A + +L+
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 235/525 (44%), Gaps = 20/525 (3%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P S+ +N ++ +M + ++L M + ++ D ++Y I+I S L +
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLA 134
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMING 190
+ V G K G++ D +SLL Y + +A + D M + V++NT+I+G
Sbjct: 135 LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKG-FW 248
F +N+A EA+ + +RM+ G +PD T +V+ GL K ++ + L K EKG
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIE 252
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML 304
++V+ ++D + +A L EMD +VVT+ +LI G A L
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
M+ + PN+V+ ++L+ A G L + L+ I++ ++ ++ ++LI+ +
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 365 CNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
+ + + +F K P +N L+ GF V E ++LF++M + + + T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
+N+L+ D A I ++ G + SIL+D K G L A +F +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 481 LXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
G K G E LF + GV+PN I +T+++ GL +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
E +LF+ M K+ +P Y +I R G + LI+ M
Sbjct: 553 EADALFREM-KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 20/265 (7%)
Query: 341 AWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHN 396
++ R+KL V+++ L D + +F + + R P +N LLS
Sbjct: 44 SYDYREKLSRNVLLDLKLDD----------AVDLFGEMVQSRPLPSIVEFNKLLSAIAKM 93
Query: 397 SLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA 456
+ I L ++M + D ++N L+ + + L A+ + +++ G+ +
Sbjct: 94 NKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTL 153
Query: 457 SILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK--HGHGEMAVSLFNQMVQ 514
S L++ Y + A + + + + +G H AV+L ++MV
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 515 SGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLN 574
G QP+ T+ +V++ G +D LSL K M ++ +I V YT IID L +N
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 575 DAYNLIRTMP---IKPNHAVWGALL 596
DA NL M I+PN + +L+
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLI 297
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/591 (22%), Positives = 256/591 (43%), Gaps = 87/591 (14%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P S+F +N ++ +M + ++L +M G++ + +TY I+I S + +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRSQISLA 64
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 190
+ + G K G++ +SLL Y + A + D M E +++ T+I+G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
F +N+A EA+ + +RM+ G +P N
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQP-----------------------------------N 149
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 306
+V +++ K G + A+ L N+M+ E DVV + T+I+ AL L +
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M +G++PN+V+ +SL+S S+G + L + I +K+ ++ ALID + K
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 367 CGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
+ K+ K+ P +N+L++GF + + +A Q+F+ M+ KD PD T+N
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
+L+ + ++ + + G + + L+ G H
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ--------GLFHD-------- 373
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
G + A +F QMV GV P+ +T++ +L + G +++ L
Sbjct: 374 -----------------GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 543 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGAC 599
+F +M K +I + YT +I+ + +AG+++D ++L ++ +KPN + ++
Sbjct: 417 VFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 600 VSHENVELGEVAARWTFELEP-ENTGNYVLLANLYAAVG-RWRDAENVRDM 648
S ++ + E P ++G Y L + G + AE +R+M
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 70 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
L D + +RS+ F++N+++ + R A +F E + S PD TY +IK
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGF 335
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV---- 181
++ G + G DT +L+ + G+ + AQ VF M V
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
++++ +++G N + E+AL V++ M + ++ D +++ V+ G ++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGD 297
+ KG N+V N M+ ++EA+ L +M E D T+ TLI ++ +GD
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 298 ARSALMLCRVM 308
++ L R M
Sbjct: 516 KAASAELIREM 526
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 231/523 (44%), Gaps = 16/523 (3%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P S+ ++ ++ +M + ++L +M + G++ + +TY I+I S L +
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSILINCFCRRSQLSLA 135
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 190
+ V K G++ D NSLL + + A + M E ++NT+I+G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
FR+NRA EA+ + +RM+ G +PD T V+ +++L + +++
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 306
+V+ N ++D + +A L EMD +VVT+ +LI G A L
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M+ + PN+V+ ++L+ A G L + L+ I++ ++ ++ ++LI+ + +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 367 CGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
+ + +F K P +N L+ GF V E ++LF++M + + + T+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
+L+ + + A + ++ G L + SIL+D G + A +F +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 483 XXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEG 540
G K G E LF + GV+PN +T+T+++ GL +E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 541 LSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
+LF+ M K+ +P Y +I R G + LIR M
Sbjct: 556 DALFREM-KEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 37/214 (17%)
Query: 386 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 445
++ L++ F S + A+ + +M+ +PD T NSLL + + A+++ ++
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 446 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
G+ + L+ H +F +H A
Sbjct: 179 EMGYQPDSFTFNTLI------------HGLF---------------------RHNRASEA 205
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 565
V+L ++MV G QP+ +T+ V++ G +D LSL K M +Q +I P V Y IID
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIID 264
Query: 566 LLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL 596
L +NDA NL M I+PN + +L+
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 231/525 (44%), Gaps = 20/525 (3%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P S+ +N ++ +M + ++L +M G++ D +TY I I S L +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRRSQLSLA 137
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 190
+ V K G++ D +SLL Y ++ A + D M E ++ T+I+G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK-EKG-FW 248
F +N+A EA+ + ++M+ G +PD T +V+ GL K ++ + L K EKG
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIE 255
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML 304
++V+ N ++D K M +A L EMD DV T+++LI+ G A L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
M+ + PN+V+ ++L+ A G L + L+ I++ ++ ++ ++LI+ +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 365 CNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
+ + + +F K P ++ L+ GF V E ++LF++M + + + T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 421 FNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 480
+ +L+ + D A + ++ G + +IL+D K G L A +F +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 481 LXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
G K G E LF + GV PN I + +++ G +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
E SL K M K+ +P Y +I R G + LI+ M
Sbjct: 556 EADSLLKKM-KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 21/289 (7%)
Query: 374 VFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+F K R P +N LLS + I L +QM + D T++ + +
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXX 489
+ L A+ + +++ G+ + S L++ Y + A + + +
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 490 XXXXXXYGK--HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
+G H AV+L +QMVQ G QP+ +T+ +V++ G +D LSL K M
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACV---- 600
++ +I V Y IID L + ++DA NL M I+P+ + +L+ +C+
Sbjct: 250 -EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI-SCLCNYG 307
Query: 601 --SHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRD 647
S + L ++ R ++ P N + L + + G+ +AE + D
Sbjct: 308 RWSDASRLLSDMIER---KINP-NVVTFSALIDAFVKEGKLVEAEKLYD 352
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 237/543 (43%), Gaps = 19/543 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ D P ++ ++ T++ + + G A +LF M G+ PD Y +I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-PDLIAYSTLIDGYFKAG 335
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWN 185
L MG + G LD V +S + +Y+ +G+ A +V+ M Q VV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
+I G ++ R EA +Y +++ G+EP T S++ N+ G ++ + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSA 301
G+ ++V+ ++D K G M A + +M +VV + +LI+G+ A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L + R+M + G+KP++ + +++ G L L + LE + + LID
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL----VREAIQLFKQMLVKDVQPD 417
+ K + ++F + + + A+ + IH + +A + F ++ ++PD
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
T+N+++ Y L L +A I L + F +IL+ + K + A +F+
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 478 IIPLXXXXXXXXXXXXXX--YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
I+ + K E + LF +M + G+ P+ ++++ ++ G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVW 592
VDE ++F + +++P V Y +I + G+L +A L M +KP+ +
Sbjct: 756 RVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 814
Query: 593 GAL 595
AL
Sbjct: 815 RAL 817
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 178/375 (47%), Gaps = 14/375 (3%)
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLKNVELGREVHALVKEK 245
M+N ++R + ++++ G+EP + VL A V + H LV E+
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSA 301
GF +V N +L + Q++ A L + + + +VVT+ TLING+ G+ A
Sbjct: 247 GFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L +VM G++P+L++ ++L+ G L G L + A+ + ++ +V+V ++ ID+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 417
Y K + V+ + + +P + L+ G + + EA ++ Q+L + ++P
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
T++SL+ + +L+ ++ +I+ G+ + + +LVD SK G + +A F+
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FS 484
Query: 478 IIPLXXXXXXXXXXXXXX---YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 534
+ L + + + A+ +F M G++P+ TFT+V+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 535 GLVDEGLSLFKFMLK 549
G ++E L LF M K
Sbjct: 545 GRLEEALFLFFRMFK 559
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/581 (22%), Positives = 259/581 (44%), Gaps = 76/581 (13%)
Query: 97 DALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG----------VHGMTFKAGF 146
DA+ LF M+ S LP + ++ A + + D+ + VHG+ +
Sbjct: 68 DAIGLFGGMVKS-RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-YTYNI 125
Query: 147 DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK---EQTVVSWNTMINGYFRNNRAEEALRV 203
++ F + S +++ + L+ +MK E ++V+ ++++NGY R +A+ +
Sbjct: 126 LINCFCRRSQISLAL--------ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 204 YNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK---EKGFWGNMVVRNAMLDM 260
++M++ G PD T +++ L E ALV ++G N+V +++
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 261 YVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
K G A L N+M+ E DVV + T+I+ AL L + M +G++PN
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 317 LVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM 376
+V+ +SL+S S+G + L + I +K+ ++ ALID + K + K++
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 377 KTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLA 432
K+ P +N+L++GF + + +A Q+F+ M+ KD PD T+N+L+ +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 433 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXX 492
++ + + G + + L+ G H
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQ--------GLFH------------------- 447
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
G + A +F QMV GV P+ +T++ +L + G +++ L +F +M K +
Sbjct: 448 ------DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-E 500
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE 609
I + YT +I+ + +AG+++D ++L ++ +KPN + ++ S ++
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 610 VAARWTFELEP-ENTGNYVLLANLYAAVG-RWRDAENVRDM 648
+ E P N+G Y L + G + AE +R+M
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 180/375 (48%), Gaps = 17/375 (4%)
Query: 70 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
L D + QR +L ++ ++ + G ALNL +M + + D + II +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSL 270
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TV 181
+D + + G + +SL++ + G + +QL+ D+++++ +
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
V++N +I+ + + + EA ++Y+ M+ ++PD T S++ + ++ +++
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGD 297
+ K + ++V N ++ + K ++++ L EM D VT+TTLI G +GD
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
+A + + M+ +GV P++++ + LL + G L + + + +++ ++ + T
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKD 413
+I+ K + + +F S K P +N ++SG L++EA L K+M
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 414 VQPDNATFNSLLPAY 428
P++ T+N+L+ A+
Sbjct: 571 PLPNSGTYNTLIRAH 585
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Query: 70 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
L+D + +RS+ F++N+++ + R A +F E + S PD TY +IK
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGF 410
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV---- 181
++ G + G DT +L+ + G+ + AQ VF M V
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
++++ +++G N + E+AL V++ M + ++ D +++ V+ G ++
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGD 297
+ KG N+V N M+ ++EA+ L +M E + T+ TLI ++ +GD
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 298 ARSALMLCRVM 308
++ L R M
Sbjct: 591 KAASAELIREM 601
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 12/276 (4%)
Query: 383 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 442
+ + +L +H+ + +AI LF M+ P FN LL A A + +++
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 443 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 502
+ R ++ L +IL++ + + + A + + G + HG
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG-YCHG 168
Query: 503 EM---AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 559
+ AV+L +QMV+ G +P+ ITFT+++H E ++L M+ Q P +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVT 227
Query: 560 YTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVE--LGEVAARW 614
Y +++ L + G + A NL+ M I+ + ++ ++ + + +V+ L
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 615 TFELEPENTGNYVLLANLYAAVGRWRDAEN-VRDMV 649
T + P N Y L + + GRW DA + DM+
Sbjct: 288 TKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMI 322
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/585 (21%), Positives = 252/585 (43%), Gaps = 78/585 (13%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P S+ +N ++ +M + ++L +M G++ D +TY I I S L +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRRSQLSLA 137
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 190
+ V K G++ D +SLL Y ++ A + D M E ++ T+I+G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
F +N+A EA+ + ++M+ G +PD T +V+ +++L + ++ N
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 306
+V+ N ++D K ++ A L EM+ +VVT+ +LIN G A L
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
ML + + PN+V+ +L+ A G L + LH I++ ++ + I
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT------------ 365
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+N L++GF ++ + EA Q+FK M+ KD P+ T+N+L+
Sbjct: 366 -------------------YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
+ ++ + + + + G + + ++ + + G A +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV----------- 455
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
F QMV + V + +T++ +LH G +D L +FK+
Sbjct: 456 ----------------------FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALL-GACVSHENV 605
+ K + + Y +I+ + +AG++ +A++L ++ IKP+ + ++ G C
Sbjct: 494 LQKSEMELNIF-IYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 606 ELGEVAARWTFELEPENTGNY--VLLANLYAAVGRWRDAENVRDM 648
E ++ + + N+G Y ++ ANL R AE +++M
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDC-DRAASAELIKEM 596
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 183/406 (45%), Gaps = 14/406 (3%)
Query: 70 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
L D + QR L ++ T++ + G ALNL +M + + + II +
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSL 268
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 181
+++ V + G + NSL+ N G A + M E+ V
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
V++N +I+ +F+ + EA +++ M+ ++PD T ++ + ++ +++
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGD 297
+ K N+ N +++ + KC ++++ L EM + + VT+TT+I G+ GD
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
SA M+ + M+ V ++++ + LL S+G L+ + + + ++E + +
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 358 LIDMYAKCNCGNLSYKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
+I+ K ++ +F S K +N ++SG L++EA LF++M P
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 462
++ T+N+L+ A D + + + SGF+ S++ ++
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 35/264 (13%)
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 458
V +A+ LF M+ P FN LL A A + + +++ + G + L SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 459 LVDIY-------------SKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
++ + +K LGY I + L Y A
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG-----------YCHSKRISDA 172
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIID 565
V+L +QMV+ G +P+ TFT+++H E ++L M+ Q P + Y +++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVVN 231
Query: 566 LLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE- 621
L + G ++ A NL+ M IK N ++ ++ + + +V EVA E+E +
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV---EVAVDLFTEMETKG 288
Query: 622 ---NTGNYVLLANLYAAVGRWRDA 642
N Y L N GRW DA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDA 312
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/564 (21%), Positives = 244/564 (43%), Gaps = 54/564 (9%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P+ L ++ + + + + L+L +M G+ + +T I+I C L +
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIA-HNLYTLSIMINCCCRCRKLSLA 126
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMING 190
G K G++ DT ++L+ G +A + D M E T+++ N ++NG
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
N + +A+ + +RM++ G +P+ T VL L E+ ++E+ +
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCR 306
V + ++D K G + A+ L NEM+ + D++ +TTLI G+ G L R
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M+ + P++V+ ++L+ G L + LH I++ + + + T+LID + K N
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 367 CGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
+ + + K P +N L++G+ +L+ + ++LF++M ++ V D T+N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
+L+ + L L+ A + ++ R ++ S + + C
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRV--RPDIVSYKILLDGLC---------------- 468
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
+G E A+ +F ++ +S ++ + + ++H +A VD+
Sbjct: 469 ---------------DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 543 LFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPI---KPNHAVWGAL---- 595
LF L + P V Y +I L + G L++A L R M PN + L
Sbjct: 514 LF-CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 596 LGACVSHENVELGEVAARWTFELE 619
LG + ++ +L E R F ++
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVD 596
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 183/409 (44%), Gaps = 29/409 (7%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMG 134
Q + ++ ++++ + G+ A+ L +M + L D Y III C D S LD
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL-DAVKYSIIIDGLCKDGS-LDNA 266
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMING 190
+ GF D + +L+ + AG + A+L+ D++K + VV+++ +I+
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL--VKEKGFW 248
+ + + EA ++ M+ G+ PD T S++ G K +L + H L + KG
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLID--GFCKENQLDKANHMLDLMVSKGCG 384
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML 304
N+ N +++ Y K + + L +M D VT+ TLI G+ G A L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES---EVIVETALIDM 361
+ M+ V+P++VS LL G + G+ A I +K+E E+ + I +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLD-----GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 362 YAKCNCGNL--SYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
+ CN + ++ +F +K K +N ++ G + EA LF++M
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
P+ T+N L+ A+ D ++ + + R GF ++VD+ S
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/468 (20%), Positives = 191/468 (40%), Gaps = 56/468 (11%)
Query: 174 DLMKEQT-------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPAC 226
DL +E T ++ ++ + + R + + L + +M G+ + T+ ++ C
Sbjct: 58 DLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCC 117
Query: 227 GLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDV 282
+ + L + + G+ + V + +++ G++ EA L + M E +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 283 VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW 342
+T L+NG LNG A++L M+ G +PN V+ +L G L
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 343 AIRQKLESEVIVETALIDMYAKC----NCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSL 398
+K++ + + + +ID K N NL ++ +K K + L+ GF +
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 399 VREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASI 458
+ +L + M+ + + PD F++L+ + L++A +H +I+ G +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 459 LVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQ 518
L+D + K L A+H+ ++ MV G
Sbjct: 358 LIDGFCKENQLDKANHMLDL---------------------------------MVSKGCG 384
Query: 519 PNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 578
PN TF +++ A L+D+GL LF+ M + + V Y +I G+L A
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAKE 443
Query: 579 LIRTM---PIKPNHAVWGALL-GACVSHE---NVELGEVAARWTFELE 619
L + M ++P+ + LL G C + E +E+ E + EL+
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 197/454 (43%), Gaps = 29/454 (6%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
++NT+++ Y + G H AL + EM+ GLT P TY +I + ++ +
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLT-PSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNR 196
G + +L+ + G +A V M + +VV++N +ING+ +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
E+A+ V M + G+ PD + +VL +V+ V + EKG + + ++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 257 MLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
++ + + + KEA L EM D T+T LIN Y + GD AL L M+ +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 313 VKPNLVSVASLLSACGSFGSLNYGK-CLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
V P++V+ + L++ K L + + S+V T LI+ NC N+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT-LIE-----NCSNIE 604
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
+K + +L+ GF ++ EA Q+F+ ML K+ +PD +N ++ +
Sbjct: 605 FKSVV-----------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
D+++A ++ +++SGFL LV K G + + + +
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 492 XXXXYGKHGHGEMAVSL--FNQMVQSGVQPNQIT 523
H G M V L +M + G PN I+
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 220/532 (41%), Gaps = 95/532 (17%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
++F++N ++R + G AL LF +M G LP+ TY +I L +D G +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 138 -HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWNTMINGYF 192
M K G + + N ++ G ++ V M + V++NT+I GY
Sbjct: 263 LRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
+ +AL ++ M+ G+ P T S++ + N+ E ++ +G N
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVM 308
++D + + G M EA+ + EM++ VVT+ LING+ + G A+ + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 309 LLEGVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
+G+ P++VS +++LS C S+ A+R K E +VE +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDV--------DEALRVKRE---MVEKGI--------- 481
Query: 368 GNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
K T +++L+ GF +EA L+++ML + PD T+ +L+ A
Sbjct: 482 ------------KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
Y + DL++A+ +H ++ G L + S+L++
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN-------------------------- 563
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH-------------- 533
K A L ++ P+ +T+ +++ CS+
Sbjct: 564 -------GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 534 -AGLVDEGLSLFKFML-KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
G++ E +F+ ML K H+ P Y +I RAG + AY L + M
Sbjct: 617 MKGMMTEADQVFESMLGKNHK--PDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/473 (21%), Positives = 211/473 (44%), Gaps = 39/473 (8%)
Query: 118 YPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEK-EQAQLVFDLM 176
+ +++K+ S LS +D + + + GF N++L + + A+ VF M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 177 KEQ----TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNV 232
E V ++N +I G+ + AL ++++M G P+ T +++ L+ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 233 ELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTL 288
+ G ++ + KG N++ N +++ + G+MKE ++ EM+ D VT+ TL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQK 347
I GY G+ AL++ ML G+ P++++ SL+ + G++N + L +R
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 348 LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAI 403
+E T L+D +++ N +Y+V + + +P +NAL++G + +AI
Sbjct: 377 CPNERTY-TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 404 QLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILV--- 460
+ + M K + PD +++++L + D+ +A+ + ++ G S L+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 461 ----------DIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFN 510
D+Y + +G F L Y G E A+ L N
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA-----------YCMEGDLEKALQLHN 544
Query: 511 QMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCI 563
+MV+ GV P+ +T++ +++ + E L + + + V ++T I
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 170/417 (40%), Gaps = 46/417 (11%)
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQ-MKEAWWLANEMDET----DVVTWTTLINGY 292
VH L + GF ++ NA+LD ++ + + A + EM E+ +V T+ LI G+
Sbjct: 157 VH-LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 293 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQKLESE 351
G+ AL L M +G PN+V+ +L+ ++ G K L + A++ LE
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPN 274
Query: 352 VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 411
+I +N +++G ++E + +M
Sbjct: 275 LI-------------------------------SYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
+ D T+N+L+ Y + QA+ +H ++R G + + L+ K G++
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 472 AHHIFNIIPLXXX--XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
A + + + + + G+ A + +M +G P+ +T+ ++++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIK 586
G +++ +++ + M K+ + P V Y+ ++ R+ +++A + R M IK
Sbjct: 424 GHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 587 PNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDA 642
P+ + +L+ G C E ++ P + Y L N Y G A
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 249/538 (46%), Gaps = 57/538 (10%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
+ ++R + + DA+ LF M+ S LP F + ++ A + + D+ + +
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKS-RPLPSIFEFNKLLSAIAKMKKFDLVISLGEK 110
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQA-QLVFDLMK---EQTVVSWNTMINGYFRNNR 196
+ G + + N L+ + + A L+ +MK E ++V+ ++++NGY R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK---EKGFWGNMVV 253
+A+ + ++M++ G PD T +++ L E ALV ++G N+V
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS---EAVALVDRMVQRGCQPNLVT 227
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVML 309
+++ K G + A+ L N+M+ E +VV ++T+I+ AL L M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
+GV+PN+++ +SL+S ++ + L + I +K+ V+ ALID + K
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 370 LSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ K++ + K+ P +++L++GF + + EA +F+ M+ KD P+ T+N+L+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
+ + + + + + + G + + L+ H F
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI------------HGFF--------- 446
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
+ + A +F QMV GV PN +T+ ++L G +++ + +F+
Sbjct: 447 ------------QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL-GAC 599
+ L++ ++ P + Y +I+ + +AG++ D ++L ++ +KP+ ++ ++ G C
Sbjct: 495 Y-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 46/350 (13%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
++T++ + DALNLF EM + G+ P+ TY +I
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVR-PNVITYSSLI------------------- 302
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ---TVVSWNTMINGYFRNNRAE 198
S L Y + ++L+ D+++ + VV++N +I+ + + +
Sbjct: 303 -------------SCLCNYERWSD--ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 258
EA ++Y+ M+ ++PD T S++ + ++ + + L+ K + N+V N ++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 259 DMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
+ + K ++ E L EM + + VT+TTLI+G+ D +A M+ + M+ +GV
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
PN+++ +LL G L + + R K+E + +I+ K + +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 375 FMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
F S K P +N ++SGF L EA LF++M PD+ T
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 12/276 (4%)
Query: 383 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 442
+ + +L +H+ + +AI LF M+ P FN LL A A + +++
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 443 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHG 502
+ R G + L +IL++ + + + A + + G + HG
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG-YCHG 168
Query: 503 EM---AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 559
+ AV+L +QMV+ G +P+ ITFT+++H E ++L M+ Q P +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVT 227
Query: 560 YTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVS--HENVELGEVAARW 614
Y +++ L + G ++ A+NL+ M I+ N ++ ++ + HE+ L
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 615 TFELEPENTGNYVLLANLYAAVGRWRDAEN-VRDMV 649
+ P N Y L + RW DA + DM+
Sbjct: 288 NKGVRP-NVITYSSLISCLCNYERWSDASRLLSDMI 322
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 218/520 (41%), Gaps = 67/520 (12%)
Query: 145 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEA 200
G D ++ + + + G+ E+A +F M+E VV++NT+I+G R +EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAM 257
+M++ G+EP T S+L GL + +G + + ++KE KGF N++V N +
Sbjct: 315 FMFKEKMVERGMEPTLITY-SILVK-GLTRAKRIG-DAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 258 LDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGDARSALMLCRVMLLEGV 313
+D +++ G + +A + + M + T+ TLI GY NG A +A L + ML G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 314 KPNLVSVASLL-------------------------SACGSFGSLNYGKCLHAWAIR--- 345
N S S++ G +L G C H +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 346 ---QKLESEVIVETALID--MYAKCNCGNLS------YKVFMKTSKKRTAPWNALLSGFI 394
Q L +V+T + ++ C G L ++ + +N L+SG
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+ EA +M+ + ++PDN T++ L+ + +++A+ R+G L +
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 455 VASILVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
S+++D K F N+ P Y + G MA+ L
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP----NTVVYNHLIRAYCRSGRLSMALEL 667
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
M G+ PN T+TS++ S V+E LF+ M + + P V HYT +ID G
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYG 726
Query: 569 RAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSHENV 605
+ GQ+ L+R M K PN + ++G NV
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 210/516 (40%), Gaps = 62/516 (12%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
++NT++ GR +A +M+ G+ P TY I++K + + V
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNR 196
K GF + V N+L+ ++ AG +A + DLM + T ++NT+I GY +N +
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVL-------------------------PACGLLKN 231
A+ A R+ M+ G + + SV+ P GLL
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 232 V-----ELGREVHAL-----VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET- 280
+ + G+ AL KGF + NA+L + G++ EA+ + E+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 281 ---DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
D V++ TLI+G A M M+ G+KP+ + + L+ CG F +
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEE 593
Query: 338 CLHAW--AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLS 391
+ W R + +V + +ID K + F + K P +N L+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
+ + + A++L + M K + P++AT+ SL+ ++++ +++A + + G
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 452 RLEVASILVDIYSKCGSLGYAH------HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
+ + L+D Y K G + H N+ P Y + G+ A
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP----NKITYTVMIGGYARDGNVTEA 769
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
L N+M + G+ P+ IT+ ++ G V E
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 218/520 (41%), Gaps = 67/520 (12%)
Query: 145 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEA 200
G D ++ + + + G+ E+A +F M+E VV++NT+I+G R +EA
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAM 257
+M++ G+EP T S+L GL + +G + + ++KE KGF N++V N +
Sbjct: 315 FMFKEKMVERGMEPTLITY-SILVK-GLTRAKRIG-DAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 258 LDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGDARSALMLCRVMLLEGV 313
+D +++ G + +A + + M + T+ TLI GY NG A +A L + ML G
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 314 KPNLVSVASLL-------------------------SACGSFGSLNYGKCLHAWAIR--- 345
N S S++ G +L G C H +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 346 ---QKLESEVIVETALID--MYAKCNCGNLS------YKVFMKTSKKRTAPWNALLSGFI 394
Q L +V+T + ++ C G L ++ + +N L+SG
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLE 454
+ EA +M+ + ++PDN T++ L+ + +++A+ R+G L +
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 455 VASILVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
S+++D K F N+ P Y + G MA+ L
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP----NTVVYNHLIRAYCRSGRLSMALEL 667
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
M G+ PN T+TS++ S V+E LF+ M + + P V HYT +ID G
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYG 726
Query: 569 RAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSHENV 605
+ GQ+ L+R M K PN + ++G NV
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 210/516 (40%), Gaps = 62/516 (12%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
++NT++ GR +A +M+ G+ P TY I++K + + V
Sbjct: 297 TFNTVIDGLGMCGRYDEAFMFKEKMVERGME-PTLITYSILVKGLTRAKRIGDAYFVLKE 355
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNR 196
K GF + V N+L+ ++ AG +A + DLM + T ++NT+I GY +N +
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVL-------------------------PACGLLKN 231
A+ A R+ M+ G + + SV+ P GLL
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 232 V-----ELGREVHAL-----VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET- 280
+ + G+ AL KGF + NA+L + G++ EA+ + E+
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 281 ---DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
D V++ TLI+G A M M+ G+KP+ + + L+ CG F +
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEE 593
Query: 338 CLHAW--AIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLS 391
+ W R + +V + +ID K + F + K P +N L+
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
+ + + A++L + M K + P++AT+ SL+ ++++ +++A + + G
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 452 RLEVASILVDIYSKCGSLGYAH------HIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMA 505
+ + L+D Y K G + H N+ P Y + G+ A
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP----NKITYTVMIGGYARDGNVTEA 769
Query: 506 VSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
L N+M + G+ P+ IT+ ++ G V E
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 210/435 (48%), Gaps = 52/435 (11%)
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
++V+ N+++NG+ NR EA+ + ++M++ G +PD T +++ GL ++ + E
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH--GLFQHNK-ASEAV 190
Query: 240 ALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGY 292
ALV+ KG ++V A+++ K G+ A L N+M+ E DVV ++T+I+
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 293 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
AL L M +G++P++ + +SL+S ++G + L + + +K+ V
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQ 408
+ +LID +AK + K+F + ++ P +N+L++GF + + EA Q+F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M+ KD PD T+N+L+ + + M + + R G + + L+
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI-------- 422
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVL 528
H F + + A +F QMV GV PN +T+ ++L
Sbjct: 423 ----HGFF---------------------QASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 529 HACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---I 585
G +++ + +F++ L++ ++ P + Y + + + +AG++ D ++L ++ +
Sbjct: 458 DGLCKNGKLEKAMVVFEY-LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 586 KPNHAVWGALL-GAC 599
KP+ + ++ G C
Sbjct: 517 KPDVIAYNTMISGFC 531
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 171/365 (46%), Gaps = 13/365 (3%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
Q L ++ ++ + G P ALNL +M G D Y +I + +D +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGY 191
+ G D F +SL++ N G + ++L+ D+++ + VV++N++I+ +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
+ + EA ++++ M+ ++P+ T S++ + ++ +++ L+ K ++
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRV 307
V N +++ + K ++ + L +M + VT+TTLI+G+ D +A M+ +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M+ +GV PN+++ +LL G L + + + K+E ++ + + K
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 368 GNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
+ +F S K P +N ++SGF L EA LF +M PD+ T+N+
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 424 LLPAY 428
L+ A+
Sbjct: 561 LIRAH 565
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 121/252 (48%), Gaps = 15/252 (5%)
Query: 70 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA- 124
LFD + QRS+ ++N+++ + R +A +F M+ S LPD TY +I
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV-SKDCLPDVVTYNTLINGF 390
Query: 125 CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----T 180
C +D G+ + + G +T +L+ + A + + AQ+VF M
Sbjct: 391 CKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 240
++++NT+++G +N + E+A+ V+ + + +EPD T + VE G ++
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNG 296
+ KG +++ N M+ + K G +EA+ L +M E D T+ TLI ++ +G
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 297 DARSALMLCRVM 308
D ++ L + M
Sbjct: 570 DKAASAELIKEM 581
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 254/580 (43%), Gaps = 68/580 (11%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
++ + N + + GR +A +F + GL +PD+ TY +++K S + +D + +
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGL-VPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFR 193
+ G + D V NSL+ A ++A +F MKE TVV++NT++ G +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK--EKGFWGNM 251
N + +EA+ ++ M+ G P+ T ++ L KN E+ + L K + G ++
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDC--LCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDE---TDVVTWTTLINGYILNGDARSALMLCRVM 308
N ++ VK GQ+KEA ++M + D VT TL+ G + A +
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 309 LLEGVK--PNLV---SVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYA 363
L NL + S+L+ G ++++ + L A I + +S ++ +I
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV---PIIRYSC 760
Query: 364 KCNCGNLSYKVFMKTSKK-----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
K N + + +F K +K + +N L+ G + ++ A +F Q+ PD
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 419 ATFNSLLPAYAV------LADLKQAMNIH-CY------------LIRSG-------FLYR 452
AT+N LL AY L +L + M+ H C L+++G Y
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 453 LE----------VASILVDIYSKCGSLGYAHHIFN--IIPLXXXXXXXXXXXXXXYGKHG 500
L L+D SK G L A +F + +GK G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 501 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 560
+ A +LF +MV+ GV+P+ T++ ++ G VDEGL FK LK+ + P V Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK-ELKESGLNPDVVCY 999
Query: 561 TCIIDLLGRAGQLNDAYNLIRTMP----IKPNHAVWGALL 596
II+ LG++ +L +A L M I P+ + +L+
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 187/462 (40%), Gaps = 81/462 (17%)
Query: 94 RPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQ 153
R D E + +G PD TY ++ SD LD K G D
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 154 NSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMD 209
L+ AG +A D+M++Q ++ ++NT+I G R +R ++AL ++ M
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 210 AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKE 269
GV+P T + + G + E +K KG N+V NA L K G+ +E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 270 AWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLS 325
A + + + D VT+ ++ Y G+ A+ L M+ G +P
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP---------- 536
Query: 326 ACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP 385
+VIV +LI+ K + + ++K+FM+ + + P
Sbjct: 537 -------------------------DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 386 ----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
+N LL+G N ++EAI+LF+ M+ K P+ TFN+L ++ A+ +
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM- 630
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 501
L+++ + D+++ Y IF ++ K+G
Sbjct: 631 --------LFKMMDMGCVPDVFT------YNTIIFGLV------------------KNGQ 658
Query: 502 GEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
+ A+ F+QM + V P+ +T ++L A L+++ +
Sbjct: 659 VKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 191/470 (40%), Gaps = 36/470 (7%)
Query: 164 GEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV 219
G +QA M+E V S+N +I+ ++ EA+ VY RM+ G P T
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 220 VSVLPACGLLKNVELGREVHALVKEK---GFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 276
S++ G ++++ V L+KE G N+ + + + G++ EA+ +
Sbjct: 227 SSLMVGLGKRRDID---SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Query: 277 MDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 332
MD+ DVVT+T LI+ A + M KP+ V+ +LL
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 333 LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----W 386
L+ K + + +V+ T L+D A C GN ++ + P +
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVD--ALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 387 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
N L+ G + + +A++LF M V+P T+ + Y D A+ +
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 447 SGFLYRLEVASILVDIYSKCGSLGYAHHIF------NIIPLXXXXXXXXXXXXXXYGKHG 500
G + + + +K G A IF ++P Y K G
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP----DSVTYNMMMKCYSKVG 517
Query: 501 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 560
+ A+ L ++M+++G +P+ I S+++ A VDE +F M K+ ++ P V Y
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTY 576
Query: 561 TCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSHENVEL 607
++ LG+ G++ +A L M K PN + L ++ V L
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 173/397 (43%), Gaps = 19/397 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLP-DNFTYPIIIKACSDL 128
L++ Q + W ++ + +A++ ++ +G+ D+ PII +C
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 129 SFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSW 184
+ T G N L+ + A E AQ VF +K V ++
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATY 823
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK--NVELGREVH-AL 241
N +++ Y ++ + +E +Y M + E + T+ + GL+K NV+ +++ L
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEM--STHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGD 297
+ ++ F ++D K G++ EA L M + + + LING+ G+
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
A +A L + M+ EGV+P+L + + L+ G ++ G L +V+
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 358 LIDMYAKCNCGNLSYKVF--MKTSKKRTA---PWNALLSGFIHNSLVREAIQLFKQMLVK 412
+I+ K + + +F MKTS+ T +N+L+ +V EA +++ ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGF 449
++P+ TFN+L+ Y++ + A ++ ++ GF
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 148/356 (41%), Gaps = 55/356 (15%)
Query: 209 DAGVEPDCATVVSVLPACGLLKN--VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQ 266
D GV+P T ++ GLL+ +E+ ++V VK G ++ N +LD Y K G+
Sbjct: 778 DLGVQPKLPTYNLLIG--GLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 267 MKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLC-RVMLLEGVKPNLVSVA 321
+ E + L EM E + +T +I+G + G+ AL L +M P +
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG 895
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
L+ G L + +Q E ++D + NC
Sbjct: 896 PLIDGLSKSGRL--------YEAKQLFE-------GMLDYGCRPNC-------------- 926
Query: 382 RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
A +N L++GF A LFK+M+ + V+PD T++ L+ ++ + + ++
Sbjct: 927 --AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY----- 496
L SG + +++++ LG +H + + L Y
Sbjct: 985 KELKESGLNPDVVCYNLIIN------GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 497 ----GKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
G G E A ++N++ ++G++PN TF +++ S +G + ++++ M+
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 37/231 (16%)
Query: 91 QMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDT 150
+ GR ++A LF M+ G P+ Y I+I D + K G D
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCR-PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 151 FVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRAEEALRVYNR 206
+ L+ G ++ F +KE VV +N +ING +++R EEAL ++N
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 207 MMDA-GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCG 265
M + G+ PD T S++ G + +V+E G N + R +
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLG----------IAGMVEEAGKIYNEIQRAGL-------- 1063
Query: 266 QMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPN 316
E +V T+ LI GY L+G A + + M+ G PN
Sbjct: 1064 -------------EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG-VG 136
L +++ ++ +GR + L+ F E+ SGL PD Y +II L+ V
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN-PDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYF 192
+ M G D + NSL+ AG E+A +++ ++ E V ++N +I GY
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCAT 218
+ + E A VY M+ G P+ T
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGT 1104
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 205/462 (44%), Gaps = 17/462 (3%)
Query: 114 DNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF 173
D +T I+I L V G +K G++ DT ++L+ + G +A +
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 174 DLMKEQT----VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLL 229
D M E +V+ +T+ING R EAL + +RM++ G +PD T VL
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 230 KNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTW 285
N L ++ ++E+ ++V + ++D K G +A L NEM+ + DVVT+
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 286 TTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIR 345
++LI G +G + R M+ + P++V+ ++L+ G L K L+ I
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 346 QKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVRE 401
+ + + I +LID + K NC + + ++F K P ++ L++ + V +
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 402 AIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVD 461
++LF+++ K + P+ T+N+L+ + L A + ++ G + IL+D
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM--AVSLFNQMVQSGVQP 519
G L A IF + +G ++ A SLF + GV+P
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 520 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 561
+ +T+ ++ G + E LF+ M K+ P D +T
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKM-KEDGCTP--DDFT 562
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/543 (22%), Positives = 232/543 (42%), Gaps = 68/543 (12%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG-VH 138
S+ +R + + +DA++LF MI S LP + + A + D+ +G
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQS-RPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 139 GMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-------EQTVVSWNTMINGY 191
GM G + D + ++ Y K++ F ++ E ++++T++NG+
Sbjct: 95 GMELN-GIEHDMYTMTIMINCYC---RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV-----KEKG 246
R EA+ + +RM++ PD TV +++ L GR ALV E G
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK-----GRVSEALVLIDRMVEYG 205
Query: 247 FWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD----VVTWTTLINGYILNGDARSAL 302
F + V +L+ K G A L +M+E + VV ++ +I+ +G AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 303 MLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMY 362
L M ++G+K ++V+ +SL+ + G + G + I + + +V+ +ALID++
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Query: 363 AK----CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
K L ++ + T +N+L+ GF + + EA Q+F M+ K +PD
Sbjct: 326 VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 419 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 478
T++ L+ +Y + M + + G + + LV + + G L A
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE---- 441
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
LF +MV GV P+ +T+ +L G ++
Sbjct: 442 -----------------------------LFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGAL 595
+ L +F+ M K + + Y II + A +++DA++L ++ +KP+ + +
Sbjct: 473 KALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 596 LGA 598
+G
Sbjct: 532 IGG 534
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 165/368 (44%), Gaps = 19/368 (5%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMG 134
Q ++ ++ + G AL+LF +M + Y I+I + C D SF D
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK-ASVVQYSIVIDSLCKDGSFDDAL 265
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMING 190
+ M K G D +SL+ N G+ + A+++ +++ VV+++ +I+
Sbjct: 266 SLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 191 YFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGN 250
+ + + EA +YN M+ G+ PD T S++ + ++ L+ KG +
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCR 306
+V + +++ Y K ++ + L E+ + +T+ TL+ G+ +G +A L +
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
M+ GV P++V+ LL G LN K L + QK + + I ++ CN
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELN--KALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 367 CGNL--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNAT 420
+ ++ +F S K P +N ++ G + EA LF++M PD+ T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 421 FNSLLPAY 428
+N L+ A+
Sbjct: 563 YNILIRAH 570
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 188/436 (43%), Gaps = 46/436 (10%)
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
T + +N + + R + + L M G+E D T+ ++ K + V
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILN 295
+ G+ + + + +++ + G++ EA L + M E D+VT +TLING L
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
G AL+L M+ G +P+ V+ +L+ G+ L + +++ V+
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 356 TALIDMYAKCNCGNLSYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 411
+ +ID K + + +F MK K +++L+ G ++ + ++ ++M+
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
+++ PD TF++L+ + L +A ++ +I G + L+D + K L
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
A+ +F++ MV G +P+ +T++ ++++
Sbjct: 369 ANQMFDL---------------------------------MVSKGCEPDIVTYSILINSY 395
Query: 532 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPN 588
A VD+G+ LF+ + +IP Y ++ ++G+LN A L + M + P+
Sbjct: 396 CKAKRVDDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 589 HAVWGALL-GACVSHE 603
+G LL G C + E
Sbjct: 455 VVTYGILLDGLCDNGE 470
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 19/272 (6%)
Query: 383 TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHC 442
T ++ L++GF V EA+ L +M+ +PD T ++L+ + + +A+ +
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 443 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHG 500
++ GF +++ K G+ A +F + K G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 501 HGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHY 560
+ A+SLFN+M G++ + +T++S++ + G D+G + + M+ ++ IIP V +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN-IIPDVVTF 318
Query: 561 TCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALL-GACVSHENVELGEVAARWTF 616
+ +ID+ + G+L +A YN + T I P+ + +L+ G C EN L E A F
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC--KENC-LHE--ANQMF 373
Query: 617 EL------EPENTGNYVLLANLYAAVGRWRDA 642
+L EP+ Y +L N Y R D
Sbjct: 374 DLMVSKGCEPDIV-TYSILINSYCKAKRVDDG 404
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 222/519 (42%), Gaps = 50/519 (9%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
+++++N M+ Y ++G +A +++ +GL PD FTY +I LD V
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLD-PDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFR 193
G + L+ A ++A +F MK+ TV ++ +I
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
+ R EAL + M + G++P+ T ++ + E RE+ + EKG N++
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVML 309
NA+++ Y K G +++A + M+ + T+ LI GY + A+ + ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
V P++V+ SL+ G+ + L + + L + T++ID K
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 370 LSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+ +F +K P + AL+ G+ V EA + ++ML K+ P++ TFN+L+
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
LK+A + +++ G + +IL+ H +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI------------HRLL--------- 613
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA-CSHAGLVDEGLSLF 544
K G + A S F QM+ SG +P+ T+T+ + C L+D +
Sbjct: 614 ------------KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
K ++++ + P + Y+ +I G GQ N A+++++ M
Sbjct: 662 K--MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 193/455 (42%), Gaps = 53/455 (11%)
Query: 157 LAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDC 216
L MN E+ F+L + + +NT++N R +E +VY M++ V P+
Sbjct: 165 LCRKMNKDER------FELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNI 218
Query: 217 ATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANE 276
T ++ L NVE + + + E G + +++ Y + + A+ + NE
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 277 MD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLL-SACGS-- 329
M + V +T LI+G + A+ L M + P + + L+ S CGS
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 330 -FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNA 388
+LN K + I+ + + ++ +L L ++ K +NA
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
L++G+ ++ +A+ + + M + + P+ T+N L+ Y +++ +AM + ++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 457
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL 508
L + + L+D + G+ A+ + ++
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSL------------------------------ 487
Query: 509 FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG 568
M G+ P+Q T+TS++ + + V+E LF L+Q + P V YT +ID
Sbjct: 488 ---MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD-SLEQKGVNPNVVMYTALIDGYC 543
Query: 569 RAGQLNDAYNLIRTMPIK---PNHAVWGALL-GAC 599
+AG++++A+ ++ M K PN + AL+ G C
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 164/394 (41%), Gaps = 53/394 (13%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGVHG 139
++ +++ R +ALNL EM +G+ P+ TY ++I + CS F + + G
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIK-PNIHTYTVLIDSLCSQCKF-EKARELLG 382
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT------------------- 180
+ G + N+L+ Y G E A V +LM+ +
Sbjct: 383 QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
Query: 181 -------------------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS 221
VV++N++I+G R+ + A R+ + M D G+ PD T S
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 222 VLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD 281
++ + K VE ++ +++KG N+V+ A++D Y K G++ EA + +M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 282 V----VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGK 337
+T+ LI+G +G + A +L M+ G++P + + L+ G ++
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 338 CLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNALLS 391
+ + + T I Y C G L + + K + +P +++L+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTY--CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
G+ A + K+M +P TF SL+
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 200/520 (38%), Gaps = 78/520 (15%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVG 136
++ ++N ++ Y + G DA+++ VE++ S P+ TY +IK C MGV
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDV-VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYF 192
+ K D+ T+ NSL+ +G + A + LM ++ +V ++ +MI+
Sbjct: 451 NKMLERKVLPDVVTY--NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWG 249
++ R EEA +++ + GV P+ +++ V+ E H ++++ K
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD---EAHLMLEKMLSKNCLP 565
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEM-------------------------------- 277
N + NA++ G++KEA L +M
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 278 -------DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSF 330
+ D T+TT I Y G A + M GV P+L + +SL+ G
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 331 GSLNYG----KCLHAWAIRQKLESEVIVETALIDM-YAK--------CNCGNL-----SY 372
G N+ K + + + + L++M Y K C N+
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 373 KVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKD-VQPDNATFNSLLPA 427
++ K + P + L+ G +R A ++F M + + P FN+LL
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLXXXXX 486
L +A + +I G L +LE +L+ K G +F N++
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 487 XXX-XXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 525
GK G E LFN M ++G + + T++
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/551 (22%), Positives = 231/551 (41%), Gaps = 67/551 (12%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F R+L S+ +R + + DA++LF +MIHS LP + + A +
Sbjct: 46 FSAFSDRNL-SYRERLRSGLVDIKADDAIDLFRDMIHSR-PLPTVIDFSRLFSAIAKTKQ 103
Query: 131 LDMGV---------GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV 181
D+ + G+ + ++ F + L + +A K + L E
Sbjct: 104 YDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK-----IIKLGYEPNT 158
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
++++T+ING R EAL + +RM++ G +PD T+ +++ L G+E A+
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL-----SGKEAEAM 213
Query: 242 V-----KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGY 292
+ E G N V +L++ K GQ A L +M+E D V ++ +I+G
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 293 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
+G +A L M ++G+ N+++ L+ + G + G L I++K+ V
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
+ + LID F+ +REA +L K+M+ +
Sbjct: 334 VTFSVLID-------------------------------SFVKEGKLREAEELHKEMIHR 362
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
+ PD T+ SL+ + L +A + ++ G + +IL++ Y K +
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA 530
+F + L G + G +A LF +MV V PN +T+ +L
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 531 CSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKP 587
G ++ L +F+ + K + + Y II + A +++DA++L ++P +KP
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELD-IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 588 NHAVWGALLGA 598
+ ++G
Sbjct: 542 GVKTYNIMIGG 552
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 177/406 (43%), Gaps = 23/406 (5%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
Q + ++ ++ + + G+ A+ L +M + L D Y III LD
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKHGSLDNAF 283
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGY 191
+ G + N L+ + NAG + A+L+ D++K + VV+++ +I+ +
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
+ + EA ++ M+ G+ PD T S++ +++ ++ L+ KG N+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRV 307
N +++ Y K ++ + L +M D VT+ TLI G+ G A L +
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLES---EVIVETALIDMYAK 364
M+ V PN+V+ LL G + G+ A I +K+E E+ + I ++
Sbjct: 464 MVSRKVPPNIVTYKILLD-----GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 365 CNCGNL--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDN 418
CN + ++ +F K P +N ++ G + EA LF++M PD
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 419 ATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
T+N L+ A+ D +++ + L R GF +++D+ S
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 191/461 (41%), Gaps = 61/461 (13%)
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
TV+ ++ + + + + + L + +M G+ + T+ ++ + + L
Sbjct: 87 TVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAM 146
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILN 295
+ + G+ N + + +++ G++ EA L + M E D++T TL+NG L+
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLES---- 350
G A++L M+ G +PN V+ +L+ C S G+ A + +K+E
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS------GQTALAMELLRKMEERNIK 260
Query: 351 -EVIVETALIDMYAK----CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQL 405
+ + + +ID K N NL ++ MK +N L+ GF + + +L
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 406 FKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 465
+ M+ + + P+ TF+ L+ ++ L++A +H +I G + L+D
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID---- 376
Query: 466 CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFT 525
+ K H + A + + MV G PN TF
Sbjct: 377 -----------------------------GFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 526 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM-- 583
+++ A +D+GL LF+ M + + V Y +I G+LN A L + M
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 584 -PIKPNHAVWGALL-GACVSHEN---VELGEVAARWTFELE 619
+ PN + LL G C + E+ +E+ E + EL+
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 144/355 (40%), Gaps = 11/355 (3%)
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
A A+ L R M+ P ++ + L SA + L + + + +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 358 LIDMYAKCNCGNLSYKVFMKTSK----KRTAPWNALLSGFIHNSLVREAIQLFKQMLVKD 413
+I+ + +C L++ K K T ++ L++G V EA++L +M+
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
+PD T N+L+ + +AM + ++ G ++++ K G A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 474 HIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHAC 531
+ + G KHG + A +LFN+M G+ N IT+ ++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 532 SHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPN 588
+AG D+G L + M+K+ +I P V ++ +ID + G+L +A L + M I P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 589 HAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAAVGRWRDA 642
+ +L+ G C + + ++ + N + +L N Y R D
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 140/616 (22%), Positives = 248/616 (40%), Gaps = 85/616 (13%)
Query: 98 ALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLL 157
A+ LF +M+ G+ PD + Y +I++ +L L + G D++ N L+
Sbjct: 211 AMELFNDMVSVGIR-PDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 158 -AMYMNAGEKEQAQLVFDLMKEQ---TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVE 213
+ E + DL + VV++ T++ G + E L + + M+
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS 329
Query: 214 PDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL 273
P A V S++ +E + V + G N+ V NA++D K + EA L
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 274 ANEMDETDV----VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 329
+ M + + VT++ LI+ + G +AL M+ G+K ++ SL++
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 330 FGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP---- 385
FG ++ + A I +KLE V+ T+L+ Y N + +++ + + K AP
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 386 WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLI 445
+ LLSG L+R+A++LF +M +V+P+ T+N ++ Y D+ +A
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE------ 563
Query: 446 RSGFLYRLEVASILVDIYSK---------CGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
FL + I+ D YS G A + + +
Sbjct: 564 ---FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 497 G--KHGHGEMAVSLFNQMVQSGV-----------------------------------QP 519
G + G E A+S+ +MVQ GV +P
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 520 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 579
+ + +TS++ A S G E ++ M+ + +P YT +I+ L +AG +N+A L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 580 IRTM-PIK--PNHAVWGALLGACVSHENVELGEVAARWTFELEP-------ENTGNYVLL 629
M P+ PN +G L + + GEV + EL NT Y +L
Sbjct: 740 CSKMQPVSSVPNQVTYGCFL------DILTKGEVDMQKAVELHNAILKGLLANTATYNML 793
Query: 630 ANLYAAVGRWRDAENV 645
+ GR +A +
Sbjct: 794 IRGFCRQGRIEEASEL 809
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 219/536 (40%), Gaps = 69/536 (12%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
+LF +N ++ + + H+A LF M GL P++ TY I+I LD +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR-PNDVTYSILIDMFCRRGKLDTALSF 424
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 193
G G L + NSL+ + G+ A+ M E TVV++ +++ GY
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG---N 250
+ +ALR+Y+ M G+ P T ++L GL + L R+ L E W N
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLS--GLFR-AGLIRDAVKLFNEMAEWNVKPN 541
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV--------------------------- 283
V N M++ Y + G M +A+ EM E +V
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 284 ------------TWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFG 331
+T L++G+ G AL +C+ M+ GV +LV L+ G
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID-----G 656
Query: 332 SLNYGKCLHAWAIRQK-----LESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP- 385
SL + + + ++ L+ + ++ T++ID +K ++ ++ + P
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 386 ---WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV-LADLKQAMNIH 441
+ A+++G V EA L +M P+ T+ L D+++A+ +H
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXXXXXXXXXXXXXYGKH 499
+++ G L ++L+ + + G + A + I +
Sbjct: 777 NAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 500 GHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
+ A+ L+N M + G++P+++ + +++H C AG + + L ML+Q +IP
Sbjct: 836 NDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLIP 890
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 192/466 (41%), Gaps = 47/466 (10%)
Query: 156 LLAMYMNAGEKEQAQLVFDLMKEQT-----VVSWNTMINGYFRNNRAEEALRVYNRMMDA 210
L+ Y+ + LVF +M + V + + +++G + A+ ++N M+
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 211 GVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEA 270
G+ PD V+ + LK++ +E+ A ++ G N+V N ++D K ++ EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 271 WWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA 326
+ ++ + DVVT+ TL+ G + L + ML P+ +V+SL
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL--- 338
Query: 327 CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPW 386
+ R K+E + + ++D +S +F+ +
Sbjct: 339 ------------VEGLRKRGKIEEALNLVKRVVDF-------GVSPNLFV---------Y 370
Query: 387 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
NAL+ EA LF +M ++P++ T++ L+ + L A++ ++
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 447 SGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXXXXXXXXXXXXXYGKHGHGEM 504
+G + + L++ + K G + A I Y G
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
A+ L+++M G+ P+ TFT++L AGL+ + + LF M + + P Y +I
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMI 549
Query: 565 DLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL-GACVSHENVE 606
+ G ++ A+ ++ M I P+ + L+ G C++ + E
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 61/533 (11%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P + N ++ ++V+M RP A++L+ +M + L + +++ I+IK D L
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL-NIYSFNILIKCFCDCHKLSFS 160
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAM---------------YMNAGEKEQAQLVFDLMKE- 178
+ G K GF D N+LL YM +A +FD M E
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 179 ---QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
V+++NT+ING R EA + N+M+ G+ D T +++ + + +
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLING 291
+ + ++E ++V+ +A++D K G +A +L +EM E +V T+ +I+G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 292 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA-------------CG---------- 328
+ G A L R M+ + P++++ +L+SA C
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 329 --SFGSLNYGKCLHAWAIRQK------LESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 380
++ S+ YG C H K +V+ +ID+Y + + ++ + S+
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 381 K----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
+ T +N L+ GF + A LF++M+ V PD T N LL + L++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
A+ + + S +I++ K + A +F +P+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 497 GKHGHGEMAVS--LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
G G ++ + LF++M +G +P+ T+ +++ C AG +D+ + L M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 181/432 (41%), Gaps = 58/432 (13%)
Query: 70 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
LFD + + L ++NT++ GR +A L +M+ GL + D TY I+
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-DVVTYGTIVNGM 271
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 181
+ + + + D + ++++ G AQ +F M E+ V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR--EVH 239
++N MI+G+ R +A R+ M++ + PD T +++ A +V+ G+ E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-----SVKEGKLFEAE 386
Query: 240 ALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
L E + + + V N+M+ + K + +A + + M DVVT+ T+I+ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN-----------YGKC------- 338
+ L R + G+ N + +L+ +LN +G C
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 339 --LHAWAIRQKLESEV----IVETALIDM---------YAKCNCGNL--SYKVFMKTSKK 381
L+ + +KLE + +++ + ID+ + C + ++ +F
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 382 RTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
P +N ++SGF S + +A LF +M +PDN+T+N+L+ ++ ++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 438 MNIHCYLIRSGF 449
+ + + +GF
Sbjct: 627 IELISEMRSNGF 638
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 23/247 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+FD + + ++NT++ +Y + R + + L E+ GL + + TY +I ++
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL-VANTTTYNTLIHGFCEVD 481
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWN 185
L+ + G DT N LL + + E+A +F++++ + V++N
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN 541
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV-VSVLPACGLLKNVELGREVHALVKE 244
+I+G + ++ +EA ++ + GVEPD T V + CG + H + K+
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KD 600
Query: 245 KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALM- 303
G + N ++ +K G++ ++ L +EM NG+ +GDA + M
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS----------NGF--SGDAFTIKMA 648
Query: 304 ---LCRV 307
+CRV
Sbjct: 649 EEIICRV 655
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
AV+LF+QMV+ G+ P ITF ++++ G V E +L M+ + I +V Y I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT-YGTIV 268
Query: 565 DLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGA-CVSHENVELGEVAARWTFELEP 620
+ + + G A NL+ M IKP+ ++ A++ C + + + + +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 621 ENTGNYVLLANLYAAVGRWRDAEN-VRDMV 649
N Y + + + + GRW DA+ +RDM+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 198/452 (43%), Gaps = 53/452 (11%)
Query: 167 EQAQLVFDLMKE-------QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATV 219
+Q LV D K+ + + N MIN + R + A V ++M G EPD T
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 220 VSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE 279
+++ L V + + E G ++V N++++ + G A L +M+E
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 280 ----TDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
DV T++T+I+ +G +A+ L + M +G+K ++V+ SL+ G N
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLS 391
G L + +++ VI L+D++ K + +++ + + +P +N L+
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 392 GFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLY 451
G+ + + EA + M+ PD TF SL+ Y ++ + M + + + G +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 452 RLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQ 511
SILV + + G + ++A LF +
Sbjct: 402 NAVTYSILVQGFCQSGKI---------------------------------KLAEELFQE 428
Query: 512 MVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAG 571
MV GV P+ +T+ +L G +++ L +F+ + K + +V YT II+ + + G
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV-MYTTIIEGMCKGG 487
Query: 572 QLNDAYNLIRTMP---IKPNHAVWGALL-GAC 599
++ DA+NL ++P +KPN + ++ G C
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 181/408 (44%), Gaps = 14/408 (3%)
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYF 192
V G K G++ DT N+L+ G+ +A ++ D M E VV++N+++NG
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
R+ AL + +M + V+ D T +++ + ++ + ++ KG ++V
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDETD----VVTWTTLINGYILNGDARSALMLCRVM 308
N+++ K G+ + L +M + V+T+ L++ ++ G + A L + M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ G+ PN+++ +L+ L+ + +R K +++ T+LI Y
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 369 NLSYKVFMKTSKK----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
+ KVF SK+ ++ L+ GF + ++ A +LF++M+ V PD T+ L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXX 484
L L++A+ I L +S + + + +++ K G + A ++F +P
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 485 XXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA 530
G K G A L +M + G PN T+ +++ A
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 169/394 (42%), Gaps = 44/394 (11%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGV 137
+F+++T++ + G A++LF EM G+ TY +++ C + D + +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 138 HGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYF 192
M + ++ TF N LL +++ G+ ++A ++ M + ++++NT+++GY
Sbjct: 287 KDMVSREIVPNVITF--NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
NR EA + + M+ PD T S++ ++K V+ G +V + ++G N V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVM 308
+ ++ + + G++K A L EM DV+T+ L++G NG AL +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI---- 460
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
E ++ + + + ++ G GK AW
Sbjct: 461 -FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW-------------------------- 493
Query: 369 NLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
NL + K K + ++SG + EA L ++M P++ T+N+L+ A+
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDI 462
DL + + + GF +++D+
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 213/511 (41%), Gaps = 59/511 (11%)
Query: 85 MMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKA 144
M+R + ++GR ++A+ + ++M + GLT P + T
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLT-PSSIT--------------------------- 184
Query: 145 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNRAEEA 200
N +L + + G E A+ VFD M + VV S+ M+ G FR+ + +EA
Sbjct: 185 --------MNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK--EKGFWGNMVVRNAML 258
R M+ G PD AT +L A L +N + R + K + GF N++ +++
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTA--LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 259 DMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALML-CRVMLLEGV 313
D K G +K+A+ + EM + +V T T LI+G G A L +++ +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYK 373
KPN+ + S++ LN + L + Q L V T LI+ + K +Y+
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 374 VFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYA 429
+ + P +NA + S EA +L + ++ D T+ L+
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 430 VLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL--XXXXXX 487
D+ QA+ C + ++GF + + +IL+ + + + + +F ++
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 488 XXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
Y K G ++A+ F+ M + G P+ T+ S++ +VDE L++ M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 548 LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYN 578
+ + P V T + R ND+ N
Sbjct: 595 IDRGLSPPEVTRVTLAYEYCKR----NDSAN 621
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 35/201 (17%)
Query: 384 APWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCY 443
A +L+ N LV AI F++M+ +P+ F SL+ +KQA +
Sbjct: 253 ATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Query: 444 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGE 503
++R+G+ + + L+D K G E
Sbjct: 313 MVRNGWKPNVYTHTALID---------------------------------GLCKRGWTE 339
Query: 504 MAVSLFNQMVQSGV-QPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTC 562
A LF ++V+S +PN T+TS++ ++ LF M K+ + P V+ YT
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM-KEQGLFPNVNTYTT 398
Query: 563 IIDLLGRAGQLNDAYNLIRTM 583
+I+ +AG AY L+ M
Sbjct: 399 LINGHCKAGSFGRAYELMNLM 419
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 226/533 (42%), Gaps = 61/533 (11%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P + N ++ ++V+M RP A++L+ +M + L + +++ I+IK D L
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPL-NIYSFNILIKCFCDCHKLSFS 160
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAM---------------YMNAGEKEQAQLVFDLMKE- 178
+ G K GF D N+LL YM +A +FD M E
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220
Query: 179 ---QTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
V+++NT+ING R EA + N+M+ G+ D T +++ + + +
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLING 291
+ + ++E ++V+ +A++D K G +A +L +EM E +V T+ +I+G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 292 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSA-------------CG---------- 328
+ G A L R M+ + P++++ +L+SA C
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
Query: 329 --SFGSLNYGKCLHAWAIRQK------LESEVIVETALIDMYAKCNCGNLSYKVFMKTSK 380
++ S+ YG C H K +V+ +ID+Y + + ++ + S+
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 381 K----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQ 436
+ T +N L+ GF + A LF++M+ V PD T N LL + L++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
A+ + + S +I++ K + A +F +P+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 497 GKHGHGEMAVS--LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFM 547
G G ++ + LF++M +G +P+ T+ +++ C AG +D+ + L M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 182/434 (41%), Gaps = 62/434 (14%)
Query: 70 LFDTLPQRSL----FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
LFD + + L ++NT++ GR +A L +M+ GL + D TY I+
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-DVVTYGTIVNGM 271
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 181
+ + + + D + ++++ G AQ +F M E+ V
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR--EVH 239
++N MI+G+ R +A R+ M++ + PD T +++ A +V+ G+ E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-----SVKEGKLFEAE 386
Query: 240 ALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNG 296
L E + + + V N+M+ + K + +A + + M DVVT+ T+I+ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN-----------YGKC------- 338
+ L R + G+ N + +L+ +LN +G C
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 339 --LHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFM----KTSKKRTA-------- 384
L+ + +KLE E + +I M +K + ++Y + + K SK A
Sbjct: 507 ILLYGFCENEKLE-EALELFEVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 385 ---------PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLK 435
+N ++SGF S + +A LF +M +PDN+T+N+L+ ++
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 436 QAMNIHCYLIRSGF 449
+++ + + +GF
Sbjct: 625 KSIELISEMRSNGF 638
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
++NT++ + ++ + A +LF EMI G+ PD T I++ + L+ + + +
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEV 527
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFRNNR 196
+ DLDT N ++ + ++A +F + E V ++N MI+G+ +
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
+A ++++M D G EPD +T +++ C ++ E+ + ++ GF G+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 257 MLDMYVKCGQMKEAW 271
+ D+ G++ +++
Sbjct: 648 VADLITD-GRLDKSF 661
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
AV+LF+QMV+ G+ P ITF ++++ G V E +L M+ + I +V Y I+
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT-YGTIV 268
Query: 565 DLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGA-CVSHENVELGEVAARWTFELEP 620
+ + + G A NL+ M IKP+ ++ A++ C + + + + +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 621 ENTGNYVLLANLYAAVGRWRDAEN-VRDMV 649
N Y + + + + GRW DA+ +RDM+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 207/480 (43%), Gaps = 16/480 (3%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL-DMGVGVHG 139
++N ++ Y G+ DAL + M+ PDN TY I+KA S L D+ +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNN 195
M K G + N+L+ Y G ++A + +LMK+ V+ ++N +ING
Sbjct: 266 MK-KNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
E L + + M ++PD T +++ C L R++ ++ G N V N
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 256 AMLDMYVKCGQMKEAWWLANEMDE-----TDVVTWTTLINGYILNGDARSALMLCRVMLL 310
L K + + E+ + D+VT+ TLI Y+ GD AL + R M
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
+G+K N +++ ++L A L+ L A ++ + + LI + +
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 371 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ +++ + K + P +N+L+ G H+ A++ F ++ + PD++TFNS++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIIL 564
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN-IIPLXXXX 485
Y +++A + I+ F +IL++ K G A + FN +I
Sbjct: 565 GYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD 624
Query: 486 XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
+ K + A L ++M + G++P++ T+ S + G + E L K
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 228/540 (42%), Gaps = 82/540 (15%)
Query: 75 PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMG 134
P ++LF + + Y+ G+PH AL +F +MI L P+ T C+ L
Sbjct: 129 PSKALF--DIALSAYLHEGKPHVALQIFQKMIRLKLK-PNLLT-------CNTLL----- 173
Query: 135 VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWNTMING 190
+G+ + + + F + + A+ VFD M + V ++N ++NG
Sbjct: 174 IGL--VRYPSSFSISS------------------AREVFDDMVKIGVSLNVQTFNVLVNG 213
Query: 191 YFRNNRAEEALRVYNRMM-DAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG 249
Y + E+AL + RM+ + V PD T ++L A + +E+ +K+ G
Sbjct: 214 YCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVP 273
Query: 250 NMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLC 305
N V N ++ Y K G +KEA+ + M +T D+ T+ LING G R L L
Sbjct: 274 NRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 306 RVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
M ++P++V+ +L+ C G L A + +++E++ + +
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGC-----FELGLSLEARKLMEQMENDGVKANQVTH----- 383
Query: 366 NCGNLSYKVFMKTSKKRT--------------AP----WNALLSGFIHNSLVREAIQLFK 407
N+S K K K+ +P ++ L+ ++ + A+++ +
Sbjct: 384 ---NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 408 QMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 467
+M K ++ + T N++L A L +A N+ + GF+ L+ + +
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 468 SLGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFT 525
+ A +++ + G HG E+A+ F+++ +SG+ P+ TF
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 526 SVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLG--RAGQLNDAYNLIRTM 583
S++ G V++ + +K H P D+YTC I L G + G A N T+
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIK-HSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 367 CGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
C +L + + A ++ LS ++H A+Q+F++M+ ++P+ T N+LL
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI 174
Query: 427 A---YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI-------F 476
Y + A + +++ G ++ ++LV+ Y G L A + F
Sbjct: 175 GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 477 NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGL 536
+ P K G L M ++G+ PN++T+ ++++ G
Sbjct: 235 KVNP----DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 537 VDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL---IRTMPIKPNHAVWG 593
+ E + + M KQ ++P + Y +I+ L AG + + L ++++ ++P+ +
Sbjct: 291 LKEAFQIVELM-KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 594 ALLGACVSHENVELG-EVAARWTFELEPENTG 624
L+ C ELG + AR E + EN G
Sbjct: 350 TLIDGC-----FELGLSLEARKLME-QMENDG 375
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/538 (22%), Positives = 237/538 (44%), Gaps = 23/538 (4%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
+ SLF ++MR Y + G P L +EM + P +Y ++++ + +
Sbjct: 145 KESLFI--SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAA 202
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQA-QLVFDLMKEQTV---VSWNTMINGY 191
V F ++ + E + A L+ D+ K V V + T+I+
Sbjct: 203 NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSV-LPACGLLKNVELGREVHALVKEKGFWGN 250
+ NR EAL++ M G PD T V L C + E + V+ ++ +GF +
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI-RGFAPD 321
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
+ +++ K G++ A L + + ++V + TLI+G++ +G A + M+
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 311 E-GVKPNLVSVASLLSACGSFGSLNYG-KCLHAWAIRQK-LESEVIVETALIDMYAKCNC 367
G+ P++ + SL+ G + + LH +R K + V T L+D + K
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD--MRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 368 GNLSYKVFMKTS----KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
+ +Y V + S K T +N L+S F + EA+++F++M K +PD TFNS
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 424 LLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXX 483
L+ + ++K A+ + +I G + + L++ + + G + A + N +
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 484 XXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGL 541
G + G + A SLF +M++ G P+ I+ +++ +G+V+E +
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 542 SLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALL 596
K M+ + P + + +I+ L RAG++ D + R + I P+ + L+
Sbjct: 620 EFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/544 (21%), Positives = 237/544 (43%), Gaps = 24/544 (4%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
S+N ++ + V A N+F +M+ + P FT+ +++KA ++ +D + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIP-PTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFRNNR 196
K G ++ + +L+ +A + + M V ++N +I G + +R
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 197 AEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
EA ++ NRM+ G PD T ++ + V+ +++ + + +V+ N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNT 358
Query: 257 MLDMYVKCGQMKEAWWLANEMDET-----DVVTWTTLINGYILNGDARSALMLCRVMLLE 311
++ +V G++ +A + ++M + DV T+ +LI GY G AL + M +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
G KPN+ S L+ G ++ + L+ + LI + K + +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 372 YKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
++F + +K P +N+L+SG ++ A+ L + M+ + V + T+N+L+ A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+ ++K+A + ++ G + L+ + G + A +F +
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 488 XXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFK 545
G + G E AV +MV G P+ +TF S+++ AG +++GL++F+
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 546 FMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSH 602
L+ I P + ++ L + G + DA L+ PNH W LL + +
Sbjct: 659 -KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Query: 603 ENVE 606
E ++
Sbjct: 718 ETLD 721
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 164/370 (44%), Gaps = 51/370 (13%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
LF +P+ + +NT++ +V GR DA + +M+ S +PD TY +I
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 130 FLDMGVGV-HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSW 184
+ + + V H M K G + + L+ + G+ ++A V + M + V +
Sbjct: 404 LVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 185 NTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL--- 241
N +I+ + + +R EA+ ++ M G +PD T S++ GL + E+ HAL
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS--GLCEVDEIK---HALWLL 517
Query: 242 --VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILN 295
+ +G N V N +++ +++ G++KEA L NEM D +T+ +LI G
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
G+ A L ML +G P+ +S L++ G +VE
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG---------------------MVE 616
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
A+ ++ ++ S +N+L++G + + + +F+++ + +
Sbjct: 617 EAV----------EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 416 PDNATFNSLL 425
PD TFN+L+
Sbjct: 667 PDTVTFNTLM 676
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 12/271 (4%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
+++S+ ++ + ++G+ +A N+ EM GL P+ + +I A + V +
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK-PNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ-LVFDLMKEQTV---VSWNTMINGYFR 193
+ G D + NSL++ E + A L+ D++ E V V++NT+IN + R
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
+EA ++ N M+ G D T S++ V+ R + + G + +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 254 RNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSALMLCRVML 309
N +++ + G ++EA EM D+VT+ +LING G L + R +
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 310 LEGVKPNLVSVASLLS-ACGSFGSLNYGKCL 339
EG+ P+ V+ +L+S C G Y CL
Sbjct: 662 AEGIPPDTVTFNTLMSWLCK--GGFVYDACL 690
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
Query: 70 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
+F +P++ ++++N+++ ++ AL L +MI G+ + + TY +I A
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV-VANTVTYNTLINA- 538
Query: 126 SDLSFLDMG------VGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ 179
FL G V+ M F+ G LD NSL+ AGE ++A+ +F+ M
Sbjct: 539 ----FLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 180 ----TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELG 235
+ +S N +ING R+ EEA+ M+ G PD T S++ +E G
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 236 REVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV----TWTTLING 291
+ ++ +G + V N ++ K G + +A L +E E V TW+ L+
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 292 YI 293
I
Sbjct: 714 II 715
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 224/544 (41%), Gaps = 65/544 (11%)
Query: 115 NFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 174
N Y ++I+ + +++D G+ K D ++L+ + AG+ A + D
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 175 LMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 230
M + ++N +IN + EAL V +M D GV PD T VL A +
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET------DVVT 284
L+K + N ++ K GQ +A L N M E DVVT
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
+T++++ Y + G+ + + M+ EG+KPN+VS +L+ A G +
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 345 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVR 400
+ + +V+ T L++ Y + + +VF+ K+R P +NAL+ + N +
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 401 EAIQLFKQMLVKDVQP-----------------------------------DNATFNSLL 425
EA+++F+QM ++P + A +NS +
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI------- 478
+Y A+L++A+ ++ + + + + + + I C Y I +
Sbjct: 503 GSYINAAELEKAIALYQSMRKKKV--KADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
IPL Y K G A S+FNQM +G +P+ I +TS+LHA + +
Sbjct: 561 IPL---TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY---NLIRTMPIKPNHAVWGAL 595
+ LF ++ + I P + ++ + GQ ++ + +L+R I AV+ +
Sbjct: 618 KACELF-LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 676
Query: 596 LGAC 599
AC
Sbjct: 677 FSAC 680
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 194/478 (40%), Gaps = 52/478 (10%)
Query: 70 LFDTLPQR------SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIK 123
LF+++ ++ + ++ ++M +Y G + +F M+ GL P+ +Y ++
Sbjct: 305 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK-PNIVSYNALMG 363
Query: 124 ACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ---- 179
A + + V G + G D LL Y + + +A+ VF +M+++
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
VV++N +I+ Y N EA+ ++ +M G++P+ +V ++L AC K V
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILN 295
+ + +G N N+ + Y+ ++++A L M + D VT+T LI+G
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
A+ + M + +S+L A G + + + E +VI
Sbjct: 544 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLV 411
T+++ Y + ++F++ P +AL+ F L M
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
K++ A F + A L + K+A++ LI+ ++D Y S+G
Sbjct: 664 KEIPFTGAVFFEIFSACNTLQEWKRAID----LIQ------------MMDPYLPSLSIGL 707
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
+ + ++ +GK G E + LF +++ SGV N T+ +L
Sbjct: 708 TNQMLHL-----------------FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 748
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 223/488 (45%), Gaps = 24/488 (4%)
Query: 174 DLMKEQ---TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 230
D++K + ++V ++ +++ + N+ + + + +M + G+ + T +
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWT 286
+ L + + + G+ ++V N++L+ + ++ EA L ++M E D VT+T
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 287 TLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQ 346
TL++G + A A+ L M+++G +P+LV+ ++++ G + L +
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREA 402
K+E++V++ +ID K + ++ +F K K P +N L+S + +A
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 403 IQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVA-SILVD 461
+L ML K++ PD FN+L+ A+ L +A ++ +++S + VA + L+
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 462 IYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQP 519
+ K + +F + +G + + A +F QMV GV P
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 520 NQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL 579
+ +T+ +L + G V+ L +F++M K+ + +V YT +I+ L +AG++ D ++L
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV-TYTTMIEALCKAGKVEDGWDL 483
Query: 580 IRTMP---IKPNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYVLLANLYAA 635
++ +KPN + ++ G C E + + N+G Y L
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR---- 539
Query: 636 VGRWRDAE 643
R RD +
Sbjct: 540 -ARLRDGD 546
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/515 (21%), Positives = 226/515 (43%), Gaps = 23/515 (4%)
Query: 87 RMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGF 146
R +Q + DA+ LF +M+ S P + ++ A + ++ D+ + + G
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKS-RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 106
Query: 147 DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWNTMINGYFRNNRAEEALR 202
+ + + + + + A + M + ++V+ N+++NG+ NR EA+
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 203 VYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAMLD 259
+ ++M++ G +PD T +++ GL ++ + E ALV+ KG ++V A+++
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVH--GLFQHNK-ASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 260 MYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKP 315
K G+ A L N+M+ E DVV + T+I+G A L M +G+KP
Sbjct: 224 GLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 283
Query: 316 NLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVF 375
++ + L+S ++G + L + + + + +++ ALID + K + K++
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 376 MKTSKKR-----TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
+ K + +N L+ GF V E +++F++M + + + T+ +L+ +
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
D A + ++ G + +IL+D G++ A +F +
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 491 XXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
K G E LF + GV+PN +T+T+++ GL +E +LF M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM- 522
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
K+ +P Y +I R G + LI+ M
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 173/399 (43%), Gaps = 51/399 (12%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
S+ + N+++ + R +A+ L +M+ G PD T+ ++ + V +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ-PDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVVSWNTMINGYFR 193
G D +++ GE + A + + M+ E VV +NT+I+G +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPA-CGLLKNVELGREVHALVKEKGFWGNMV 252
++A ++N+M G++PD T ++ C + + R + ++ EK ++V
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKNINPDLV 321
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMDET-------------------------------- 280
NA++D +VK G++ EA L +EM ++
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 281 --------DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGS 332
+ VT+TTLI+G+ D +A M+ + M+ +GV P++++ LL + G+
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 333 LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNA 388
+ + + ++ ++ +++ T +I+ K + +F S K P +
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
++SGF L EA LF +M P++ T+N+L+ A
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 15/343 (4%)
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKV 374
P++V + LLSA + L + + + I+ + + + +L+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 375 FMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAV 430
K K P N+LL+GF H + + EA+ L QM+ QPD TF +L+
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 431 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXX 490
+A+ + ++ G L +++ K G A ++ N +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 491 XXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFML 548
G K+ H + A LFN+M G++P+ T+ ++ + G + L ML
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 549 KQHQIIPLVDHYTCIIDLLGRAGQLNDAYNL----IRTMPIKPNHAVWGALLGACVSHEN 604
+++ I P + + +ID + G+L +A L +++ P+ + L+ ++
Sbjct: 313 EKN-INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 605 VELGEVAARWTFELEPEN-TGNYVLLANLYAAVGRWRDAENVR 646
VE G R E+ GN V L + RD +N +
Sbjct: 372 VEEGMEVFR---EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 231/537 (43%), Gaps = 66/537 (12%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPD--NFT----------- 117
F T R+L + + V + + DA++LF +MI S LP +F
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGI-KADDAVDLFRDMIQSR-PLPTVIDFNRLFSAIAKTKQ 103
Query: 118 YPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK 177
Y +++ C + G+ + ++ F + L+ + K + L
Sbjct: 104 YELVLALCKQME----SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK-----IMKLGY 154
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
E V +NT++NG R EAL + +RM++ G +P T+ +++ GL N ++
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN--GLCLNGKVSDA 212
Query: 238 VHALVK--EKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLING 291
V + + E GF N V +L++ K GQ A L +M+E D V ++ +I+G
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 292 YILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE 351
+G +A L M ++G K ++++ +L+ + G + G L I++K+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 352 VIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLV 411
V+ + LID F+ +REA QL K+M+
Sbjct: 333 VVTFSVLID-------------------------------SFVKEGKLREADQLLKEMMQ 361
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
+ + P+ T+NSL+ + L++A+ + +I G + +IL++ Y K +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
+F + L G + G E+A LF +MV V+P+ +++ +L
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK 586
G +++ L +F + K + + Y II + A +++DA++L ++P+K
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELD-IGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 182/399 (45%), Gaps = 19/399 (4%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGVHG 139
++ ++ + + G+ A+ L +M + L D Y III C D S LD +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGS-LDNAFNLFN 287
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGYFRNN 195
GF D N+L+ + NAG + A+L+ D++K + VV+++ +I+ + +
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
+ EA ++ MM G+ P+ T S++ +E ++ L+ KG +++ N
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 256 AMLDMYVKCGQMKEAWWLANEMDETDV----VTWTTLINGYILNGDARSALMLCRVMLLE 311
+++ Y K ++ + L EM V VT+ TL+ G+ +G A L + M+
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL- 370
V+P++VS LL G L K L + +K + E+ + +I ++ CN +
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELE--KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 371 -SYKVF----MKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
++ +F +K K +N ++S + +A LF++M + PD T+N L+
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
A+ D A + + SGF + +++++ S
Sbjct: 586 RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 224/544 (41%), Gaps = 65/544 (11%)
Query: 115 NFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD 174
N Y ++I+ + +++D G+ K D ++L+ + AG+ A + D
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 175 LMKEQTVV----SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLK 230
M + ++N +IN + EAL V +M D GV PD T VL A +
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 231 NVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET------DVVT 284
L+K + N ++ K GQ +A L N M E DVVT
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 285 WTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAI 344
+T++++ Y + G+ + + M+ EG+KPN+VS +L+ A G +
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 345 RQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVR 400
+ + +V+ T L++ Y + + +VF+ K+R P +NAL+ + N +
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 401 EAIQLFKQMLVKDVQP-----------------------------------DNATFNSLL 425
EA+++F+QM ++P + A +NS +
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI------- 478
+Y A+L++A+ ++ + + + + + + I C Y I +
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKV--KADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
IPL Y K G A S+FNQM +G +P+ I +TS+LHA + +
Sbjct: 429 IPL---TKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 539 EGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAY---NLIRTMPIKPNHAVWGAL 595
+ LF ++ + I P + ++ + GQ ++ + +L+R I AV+ +
Sbjct: 486 KACELF-LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 544
Query: 596 LGAC 599
AC
Sbjct: 545 FSAC 548
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 194/478 (40%), Gaps = 52/478 (10%)
Query: 70 LFDTLPQR------SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIK 123
LF+++ ++ + ++ ++M +Y G + +F M+ GL P+ +Y ++
Sbjct: 173 LFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK-PNIVSYNALMG 231
Query: 124 ACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ---- 179
A + + V G + G D LL Y + + +A+ VF +M+++
Sbjct: 232 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 291
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
VV++N +I+ Y N EA+ ++ +M G++P+ +V ++L AC K V
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILN 295
+ + +G N N+ + Y+ ++++A L M + D VT+T LI+G
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
A+ + M + +S+L A G + + + E +VI
Sbjct: 412 SKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLV 411
T+++ Y + ++F++ P +AL+ F L M
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 531
Query: 412 KDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 471
K++ A F + A L + K+A++ LI+ ++D Y S+G
Sbjct: 532 KEIPFTGAVFFEIFSACNTLQEWKRAID----LIQ------------MMDPYLPSLSIGL 575
Query: 472 AHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
+ + ++ +GK G E + LF +++ SGV N T+ +L
Sbjct: 576 TNQMLHL-----------------FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLE 616
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/545 (21%), Positives = 228/545 (41%), Gaps = 52/545 (9%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ D P ++ ++ T++ + + G A +LF M G+ PD Y +I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE-PDLIAYSTLIDGYFKAG 335
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWN 185
L MG + G LD V +S + +Y+ +G+ A +V+ M Q VV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEK 245
+I G ++ R EA +Y +++ G+EP T S++ N+ G ++ + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSA 301
G+ ++V+ ++D K G M A + +M +VV + +LI+G+ A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 302 LMLCRVMLLEGVKPNLVSVASLL------SACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
L + R+M + G+KP++ + +++ A G L R K+ +++ V
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 356 TALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
+I + KC+ + +A + F ++ ++
Sbjct: 576 NVVIHLLFKCH-------------------------------RIEDASKFFNNLIEGKME 604
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
PD T+N+++ Y L L +A I L + F +IL+ + K + A +
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 476 FNIIPLXXXXXXXXXXXXXX--YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSH 533
F+I+ + K E + LF +M + G+ P+ ++++ ++
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 534 AGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHA 590
G VDE ++F + +++P V Y +I + G+L +A L M +KP+
Sbjct: 725 RGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Query: 591 VWGAL 595
+ AL
Sbjct: 784 LQRAL 788
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 203/436 (46%), Gaps = 27/436 (6%)
Query: 187 MINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVS-VLPACGLLKNVELGREVHALVKEK 245
M+N ++R + ++++ G+EP + VL A V + H LV E+
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSA 301
GF +V N +L + Q++ A L + + + +VVT+ TLING+ G+ A
Sbjct: 247 GFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
L +VM G++P+L++ ++L+ G L G L + A+ + ++ +V+V ++ ID+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 417
Y K + V+ + + +P + L+ G + + EA ++ Q+L + ++P
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
T++SL+ + +L+ ++ +I+ G+ + + +LVD SK G + +A F+
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR-FS 484
Query: 478 IIPLXXXXXXXXXXXXXX---YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHA---- 530
+ L + + + A+ +F M G++P+ TFT+V+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 531 ---CSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA---YNLIRTMP 584
C H GL LF M ++++I + +I LL + ++ DA +N +
Sbjct: 545 DAFCKHMKPT-IGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 585 IKPNHAVWGALL-GAC 599
++P+ + ++ G C
Sbjct: 603 MEPDIVTYNTMICGYC 618
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 234/551 (42%), Gaps = 64/551 (11%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVG 136
S+ + N ++ V++G A ++ E+ SG+ + + +T I++ A C D +G
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI-NVYTLNIMVNALCKDGKMEKVGTF 257
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-------EQTVVSWNTMIN 189
+ + K G D N+L++ Y + G E+A F+LM V ++NT+IN
Sbjct: 258 LSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEA---FELMNAMPGKGFSPGVYTYNTVIN 313
Query: 190 GYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVL-PACGLLKNVELGREVHALVKEKGFW 248
G ++ + E A V+ M+ +G+ PD T S+L AC VE +V + ++ +
Sbjct: 314 GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET-EKVFSDMRSRDVV 372
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALML 304
++V ++M+ ++ + G + +A N + E D V +T LI GY G A+ L
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
ML +G ++V+ ++L L L + L + T LID
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID--GH 490
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
C GNL + A++LF++M K ++ D T+N+L
Sbjct: 491 CKLGNL-----------------------------QNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 425 LPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF------NI 478
L + + D+ A I ++ L SILV+ G L A ++ NI
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 479 IPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVD 538
P Y + G+ S +M+ G P+ I++ ++++ +
Sbjct: 582 KP----TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 539 EGLSLFKFM-LKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGA 594
+ L K M +Q ++P V Y I+ R Q+ +A ++R M + P+ + +
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 595 LLGACVSHENV 605
++ VS +N+
Sbjct: 698 MINGFVSQDNL 708
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 196/428 (45%), Gaps = 66/428 (15%)
Query: 79 LFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTY-PIIIKACSDLSFLDMGVGV 137
++++NT++ + G+ A +F EM+ SGL+ PD+ TY ++++AC ++
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS-PDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 138 HGMTFKAGF-DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNT----MINGYF 192
M + DL F +S+++++ +G ++A + F+ +KE ++ N +I GY
Sbjct: 364 SDMRSRDVVPDLVCF--SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGR--EVHALVKEKGFWGN 250
R A+ + N M+ G D T ++L GL K LG ++ + E+ + +
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILH--GLCKRKMLGEADKLFNEMTERALFPD 479
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCR 306
++D + K G ++ A L +M E DVVT+ TL++G+ GD +A +
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAW--AIRQKLESEVIVETALIDMYAK 364
M+ + + P +S + L++A S G L + W I + ++ V++ ++I Y
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGHL--AEAFRVWDEMISKNIKPTVMICNSMIKGY-- 595
Query: 365 CNCGN--------------------LSY--------------KVF-----MKTSKKRTAP 385
C GN +SY K F M+ + P
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 386 ----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
+N++L GF + ++EA + ++M+ + V PD +T+ ++ + +L +A IH
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 442 CYLIRSGF 449
+++ GF
Sbjct: 716 DEMLQRGF 723
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 162/366 (44%), Gaps = 27/366 (7%)
Query: 72 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 131
D +P L +++MM ++ + G AL F + +GL +PDN Y I+I+ +
Sbjct: 370 DVVPD--LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL-IPDNVIYTILIQGYCRKGMI 426
Query: 132 DMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTM 187
+ + + + G +D N++L +A +F+ M E+ + + +
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I+G+ + + A+ ++ +M + + D T ++L G + +++ +E+ A + K
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETD----VVTWTTLINGYILNGDARSALM 303
+ + +++ G + EA+ + +EM + V+ ++I GY +G+A
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 304 LCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESE-------VIVET 356
M+ EG P+ +S +L+ +G + A+ + +K+E E V
Sbjct: 607 FLEKMISEGFVPDCISYNTLI-----YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVK 412
+++ + + N + V K ++ P + +++GF+ + EA ++ +ML +
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 413 DVQPDN 418
PD+
Sbjct: 722 GFSPDD 727
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 177/430 (41%), Gaps = 26/430 (6%)
Query: 236 REVH---ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTL 288
RE H L++ KGF ++ NA++ V+ G ++ AW + E+ + +V T +
Sbjct: 182 REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIM 241
Query: 289 INGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKL 348
+N +G + +GV P++V+ +L+SA S G + L +
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 349 ESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQ 404
V +I+ K + +VF + + +P + +LL V E +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 405 LFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYS 464
+F M +DV PD F+S++ + +L +A+ + +G + + +IL+ Y
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 465 KCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG---KHGHGEMAVSLFNQMVQSGVQPNQ 521
+ G + A ++ N + +G + GE A LFN+M + + P+
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE-ADKLFNEMTERALFPDS 480
Query: 522 ITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIR 581
T T ++ G + + LF+ M K+ +I V Y ++D G+ G ++ A +
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 582 TM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYVLLANL----YA 634
M I P + L+ A S + L E W E+ +N V++ N Y
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKGH--LAEAFRVWD-EMISKNIKPTVMICNSMIKGYC 596
Query: 635 AVGRWRDAEN 644
G D E+
Sbjct: 597 RSGNASDGES 606
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 220/526 (41%), Gaps = 92/526 (17%)
Query: 149 DTFVQ--NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNR 206
D+FVQ + L+ Y + G + VFD+ Q +V + + EA RV+ +
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPR---VFDVF-FQVLVDFGLL----------REARRVFEK 200
Query: 207 MMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK------------EKGFWGNMVVR 254
M++ G+ V+SV +C NV L R K E G N+
Sbjct: 201 MLNYGL------VLSV-DSC----NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 255 NAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
N ++ + G++KEA L M+ DV++++T++NGY G+ L VM
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
+G+KPN S++ L + + IRQ + + +V T LID + K
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 371 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ K F + + P + A++SGF + EA +LF +M K ++PD+ TF L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
Y +K A +H ++I++G + + L+D K G L A+
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE------------ 477
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
L ++M + G+QPN T+ S+++ +G ++E + L
Sbjct: 478 ---------------------LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG- 515
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHE 603
+ + YT ++D ++G+++ A +++ M ++P + L+ H
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 604 NVELGEVAARWTFE--LEPENT------GNYVLLANLYAAVGRWRD 641
+E GE W + P T Y + NL AA ++D
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 170/406 (41%), Gaps = 40/406 (9%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
+ + +++ + ++ + +A F EMI G+ LPD Y +I +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMINGYFRNN 195
D ++++ + G+ +A +F M E V++ +INGY +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
++A RV+N M+ AG P+ T +++ +++ E+ + + G N+ N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 256 AMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
++++ K G ++EA L E + D VT+TTL++ Y +G+ A + + ML +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
G++P +V+ L++ G L G+ L W + + + +L+ Y
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC-------- 607
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
I N+L + A ++K M + V PD T+ +L+ +
Sbjct: 608 ----------------------IRNNL-KAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
++K+A + + GF + S+L+ + K A +F+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 202/483 (41%), Gaps = 20/483 (4%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
++ ++ V G +A +F +M++ GL L + + + D + V
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRA 197
+ G + N ++ G ++A + LM+ + V+S++T++NGY R
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLP-ACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
++ ++ M G++P+ S++ C + K E ++++ G + VV
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTT 356
Query: 257 MLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
++D + K G ++ A EM DV+T+T +I+G+ GD A L M +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS- 371
++P+ V+ L++ G + +H I+ V+ T LID C G+L
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID--GLCKEGDLDS 474
Query: 372 -----YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
++++ + +N++++G + + EA++L + + D T+ +L+
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXX 484
AY ++ +A I ++ G + ++L++ + G L + N +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
Y + + A +++ M GV P+ T+ +++ A + E LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 545 KFM 547
+ M
Sbjct: 655 QEM 657
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 220/526 (41%), Gaps = 92/526 (17%)
Query: 149 DTFVQ--NSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNR 206
D+FVQ + L+ Y + G + VFD+ Q +V + + EA RV+ +
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPR---VFDVF-FQVLVDFGLL----------REARRVFEK 200
Query: 207 MMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVK------------EKGFWGNMVVR 254
M++ G+ V+SV +C NV L R K E G N+
Sbjct: 201 MLNYGL------VLSV-DSC----NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 255 NAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLL 310
N ++ + G++KEA L M+ DV++++T++NGY G+ L VM
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 311 EGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
+G+KPN S++ L + + IRQ + + +V T LID + K
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 371 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ K F + + P + A++SGF + EA +LF +M K ++PD+ TF L+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
Y +K A +H ++I++G + + L+D K G L A+
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE------------ 477
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
L ++M + G+QPN T+ S+++ +G ++E + L
Sbjct: 478 ---------------------LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG- 515
Query: 547 MLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHE 603
+ + YT ++D ++G+++ A +++ M ++P + L+ H
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 604 NVELGEVAARWTFE--LEPENT------GNYVLLANLYAAVGRWRD 641
+E GE W + P T Y + NL AA ++D
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 170/406 (41%), Gaps = 40/406 (9%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
+ + +++ + ++ + +A F EMI G+ LPD Y +I +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLM----KEQTVVSWNTMINGYFRNN 195
D ++++ + G+ +A +F M E V++ +INGY +
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
++A RV+N M+ AG P+ T +++ +++ E+ + + G N+ N
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 256 AMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLE 311
++++ K G ++EA L E + D VT+TTL++ Y +G+ A + + ML +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
G++P +V+ L++ G L G+ L W + + + +L+ Y
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC-------- 607
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
I N+L + A ++K M + V PD T+ +L+ +
Sbjct: 608 ----------------------IRNNL-KAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
++K+A + + GF + S+L+ + K A +F+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 202/483 (41%), Gaps = 20/483 (4%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
++ ++ V G +A +F +M++ GL L + + + D + V
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNNRA 197
+ G + N ++ G ++A + LM+ + V+S++T++NGY R
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLP-ACGLLKNVELGREVHALVKEKGFWGNMVVRNA 256
++ ++ M G++P+ S++ C + K E ++++ G + VV
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTT 356
Query: 257 MLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSALMLCRVMLLEG 312
++D + K G ++ A EM DV+T+T +I+G+ GD A L M +G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 313 VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS- 371
++P+ V+ L++ G + +H I+ V+ T LID C G+L
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID--GLCKEGDLDS 474
Query: 372 -----YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
++++ + +N++++G + + EA++L + + D T+ +L+
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLXXX 484
AY ++ +A I ++ G + ++L++ + G L + N +
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 485 XXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
Y + + A +++ M GV P+ T+ +++ A + E LF
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 545 KFM 547
+ M
Sbjct: 655 QEM 657
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 212/493 (43%), Gaps = 51/493 (10%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
R+ S+ ++R + + +DAL+LF M+HS LP + ++ + ++ D+ +
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSR-PLPSIIDFTRLLSVIAKMNRYDVVIS 104
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVF-DLMK---EQTVVSWNTMINGYF 192
+ G N ++ + + +A +MK E +V++ +++NGY
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL--VKEKGFWGN 250
NR E+A+ ++++++ G +P+ T +++ L KN L V + G N
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC--LCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 251 MVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSALMLCR 306
+V NA++ + G+ +A WL +M E +V+T+T LI+ ++ G A L
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 307 VMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCN 366
VM+ V P++ + SL++ +G L+ + + R ++ T LI + K
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 367 CGNLSYKVFMKTSKK----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
K+F + S+K T + L+ G+ A ++F QM + PD T+N
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 423 SLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLX 482
LL +++A+ I Y+ + + +I++ K G +
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV------------- 449
Query: 483 XXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLS 542
E A LF + G++PN IT+T+++ GL+ E S
Sbjct: 450 --------------------EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 543 LFKFMLKQHQIIP 555
LFK M K+ +P
Sbjct: 490 LFKKM-KEDGFLP 501
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 183/434 (42%), Gaps = 50/434 (11%)
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
+++ + +++ + NR + + ++ +M G+ P T V+ L
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILN 295
+ + GF ++V ++L+ Y ++++A L +++ + +VVT+TTLI N
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
A+ L M G +PN+V+ +L++ G L +++++E VI
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 356 TALIDMYAKCNCGNLS-----YKVFMKTS-KKRTAPWNALLSGFIHNSLVREAIQLFKQM 409
TALID + K G L Y V ++ S + +L++G L+ EA Q+F M
Sbjct: 262 TALIDAFVKV--GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 410 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 469
P+ + +L+ + ++ M I + + G + ++L+ Y G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG-- 377
Query: 470 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
++A +FNQM P+ T+ +L
Sbjct: 378 -------------------------------RPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIK 586
G V++ L +F++M K+ I +V YT II + + G++ DA++L ++ +K
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVT-YTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 587 PNHAVWGALL-GAC 599
PN + ++ G C
Sbjct: 466 PNVITYTTMISGFC 479
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 498 KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLV 557
K+ H AV LFNQM +G +PN +T+ +++ G + L + M+K+ +I P V
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNV 258
Query: 558 DHYTCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALL-GACV 600
+T +ID + G+L +A YN++ M + P+ +G+L+ G C+
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 222/505 (43%), Gaps = 23/505 (4%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG- 136
+FS+NT++R + + AL L EM SG + T+ I+I A +D +G
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS-LVTWGILIDAFCKAGKMDEAMGF 234
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYF 192
+ M F G + D V SL+ + + GE ++ + +FD + E+ +++NT+I G+
Sbjct: 235 LKEMKF-MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPA-CGLLKNVELGREVHALVKEKGFWGNM 251
+ + +EA ++ M++ GV P+ T ++ CG+ K E ++ L+ EK N
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE-ALQLLNLMIEKDEEPNA 352
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRV 307
V N +++ K G + +A + M + D +T+ L+ G GD A L +
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 308 MLLEG--VKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKC 365
ML + P+++S +L+ L+ ++ + + + + L++ K
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 366 NCGNLSYKVFMKTSKKR----TAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
N + +++ + S + + + A++ GF ++ A L +M V ++QP +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 422 NSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
N LL + L QA + + R + +I++D K G + A + +
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 482 XXXX--XXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
+ K G+ + A+S F++MV SG +P+ SVL C G D+
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK 652
Query: 540 GLSLFKFMLKQHQIIPLVDHYTCII 564
L K ++ + I L TC +
Sbjct: 653 LTELVKKLVDKD--IVLDKELTCTV 675
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/554 (20%), Positives = 232/554 (41%), Gaps = 24/554 (4%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSDLSFLDMGVGVHG 139
S + ++ YVQM + A + M+ G + + + I++K C +L V +
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAF-NVYNHNILLKGLCRNLE-CGKAVSLLR 166
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TVVSWNTMINGYFRNN 195
+ D F N+++ + E E+A + + MK ++V+W +I+ + +
Sbjct: 167 EMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
+ +EA+ M G+E D S++ ++ G+ + V E+G + N
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 256 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 311
++ + K GQ+KEA + M E +V T+T LI+G G + AL L +M+ +
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 312 GVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
+PN V+ +++ C + + + R+ + L + AK +
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 371 SYKVF-MKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
S ++ M T P +NAL+ G + + +A+ ++ ++ K D T N LL
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 426 PAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX 485
+ D+ +AM + + S + + + ++D + K G L A + + +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 486 XXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSL 543
K G + A LF +M + P+ ++F ++ AG + SL
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 544 FKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACV 600
M + + P + Y+ +I+ + G L++A + M +P+ + ++L C+
Sbjct: 587 LVGM-SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 601 SH-ENVELGEVAAR 613
S E +L E+ +
Sbjct: 646 SQGETDKLTELVKK 659
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 12/257 (4%)
Query: 387 NALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIR 446
N LL G N +A+ L ++M + PD ++N+++ + +L++A+ + +
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 447 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM-- 504
SG + L IL+D + K G + A + G GE+
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 505 AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCII 564
+LF+++++ G P IT+ +++ G + E +F+FM+ + + P V YT +I
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI-ERGVRPNVYTYTGLI 324
Query: 565 DLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALLGACVSH----ENVELGEVAARWTFE 617
D L G+ +A L+ M K PN + ++ + VE+ E+ +
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR--R 382
Query: 618 LEPENTGNYVLLANLYA 634
P+N +LL L A
Sbjct: 383 TRPDNITYNILLGGLCA 399
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 237/587 (40%), Gaps = 81/587 (13%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
S+F +N ++ + R +DA LF EM+ L LP TY +I + V
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRL-LPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTMINGYFR 193
+ N+LL AG E A+ V MK+ V +++ + +GY
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 194 NNRAEEALRVYNRMMDAGVEPD---CATVVSVLPACGLLKNVE--LGREVHALVKEKGFW 248
N +AE AL VY +D+GV+ + C+ +++ L G ++ E LGRE+ KG
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA-----KGLV 386
Query: 249 GNMVVRNAMLDMYVK-----------------------------------CGQMKEAWWL 273
N V+ N M+D Y + G+M+ A
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 274 ANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGS 329
N+M V T+ LI GY + + + M G PN+VS +L++ C
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN-CLC 505
Query: 330 FGSLNYGKCLHAWAIRQKLES-----EVIVETALIDMYAKCNCGNL------SYKVFMKT 378
GS K L A +++ +E +V + LID C+ G + S ++ K
Sbjct: 506 KGS----KLLEAQIVKRDMEDRGVSPKVRIYNMLID--GCCSKGKIEDAFRFSKEMLKKG 559
Query: 379 SKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAM 438
+ +N L+ G + EA L ++ K ++PD T+NSL+ Y ++++ +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 439 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGK 498
++ + RSG L+ +L+ + +K G + +F + L Y
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSL-KPDLLVYNGVLHCYAV 677
Query: 499 HGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVD 558
HG E A +L QM++ + ++ T+ S++ G + E SL M ++ P D
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM-NAREMEPEAD 736
Query: 559 HYTCIIDLLGRAGQLNDAYNLIRTMPIKPNHAVWGALLGACVSHENV 605
Y I+ AY R M K G LL C+ +E V
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEK------GFLLDVCIGNELV 777
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 138/372 (37%), Gaps = 22/372 (5%)
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDV----VTWTTLINGYILNGD 297
++ +G + + +LD VK Q + + + E+D + I + D
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 298 ARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETA 357
L L M + + P++ L+ +N + L + ++L +I
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 358 LIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKD 413
LID Y K S+KV + P +N LL G +V +A + K+M
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 414 VQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 473
PD TF+ L Y+ + A+ ++ + SG SIL++ K G + A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 474 HIF------NIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSV 527
I ++P Y + G A M + G++P+ + + +
Sbjct: 375 EILGREMAKGLVP----NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 528 LHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP--- 584
+ G ++ M K + P V+ Y +I GR + + +++++ M
Sbjct: 431 IRRFCELGEMENAEKEVNKM-KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 585 IKPNHAVWGALL 596
PN +G L+
Sbjct: 490 TMPNVVSYGTLI 501
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 182/411 (44%), Gaps = 46/411 (11%)
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
S+ +I+ + R +R AL V +MM G EP T S+L L+ + + L+
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDA 298
+ G+ N+VV N ++D K G++ A L NEM++ DVVT+ TL+ G +G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
A + R M+ + P++V+ +L+ G+L+ + L+ I+ ++ + ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 359 IDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVK 412
I+ C G L + K F + K P +N L+SGF +V E ++LF++M +
Sbjct: 288 IN--GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 413 DVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 472
D T+N+L+ Y + L+ A++I C+++ + DI + C L
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR---------RVTPDIITHCILL--- 393
Query: 473 HHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACS 532
H + +G E A+ F+ M +S + + ++H
Sbjct: 394 -HGLCV--------------------NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 533 HAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
A V++ LF L + P YT +I L + G +A LIR M
Sbjct: 433 KADKVEKAWELF-CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 158/360 (43%), Gaps = 44/360 (12%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
+ S+ ++ +++ + + R DA +L + M+ SG P+ Y +I L++ +
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE-PNVVVYNTLIDGLCKNGELNIAL 196
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQT---VVSWNTMINGY 191
+ K G D N+LL +G + A+++ D+MK VV++ +I+ +
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
+ +EA +Y M+ + V+P+ T S++ + + ++ L+ KG + N+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRV 307
V N ++ + K + E L M D+ T+ TLI+GY G R AL +
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
M+ V P++++ LL +G C++ +E+AL+
Sbjct: 377 MVSRRVTPDIITHCILL----------HGLCVNGE-----------IESALVKFDD---- 411
Query: 368 GNLSYKVFMKTSKKRTA--PWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
M+ S+K +N ++ G V +A +LF ++ V+ V+PD T+ ++
Sbjct: 412 --------MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/474 (18%), Positives = 178/474 (37%), Gaps = 77/474 (16%)
Query: 189 NGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFW 248
G+ + R E+A ++ M+ + P +L A L+ E ++ G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 249 GNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSALML 304
++ ++ + +C ++ A + +M E +VT+ +L++G+ L A L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 305 CRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
+M+ G +PN+V +L+ G LN L ++ L ++V+
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT---------- 213
Query: 365 CNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
+N LL+G ++ +A ++ + M+ + + PD TF +L
Sbjct: 214 ---------------------YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 425 LPAYAVLADLKQAMNIHCYLIRS-------------------GFLYRLE----------- 454
+ + +L +A ++ +I+S G LY +
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 455 -----VASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSL- 508
+ L+ + K + +F + +G G++ V+L
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 509 -FNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
F MV V P+ IT +LH G ++ L F M + + I +V Y +I L
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV-AYNIMIHGL 431
Query: 568 GRAGQLNDAYNLIRTMP---IKPNHAVWGAL-LGACVSHENVELGEVAARWTFE 617
+A ++ A+ L +P +KP+ + + LG C + E E+ R E
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 113/277 (40%), Gaps = 19/277 (6%)
Query: 389 LLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
L +GF+H+ +A LF +M+ P F LL A A L + + + G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 449 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM---- 504
+ L +IL+ + +C L +A + L +G HG
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSV-----LGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 505 ---AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYT 561
A SL MV+SG +PN + + +++ G ++ L L M K+ +V Y
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT-YN 215
Query: 562 CIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFE- 617
++ L +G+ +DA ++R M I P+ + AL+ V N++ + + +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 618 -LEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVG 653
++P N Y + N GR DA+ D++ G
Sbjct: 276 SVDPNNV-TYNSIINGLCMHGRLYDAKKTFDLMASKG 311
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 9/255 (3%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMI-HS---GLTLPDNFTYPIIIKAC 125
+FD +P R SW + ++MG DA LFV M+ HS +P ++ ++KAC
Sbjct: 145 MFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP-SWILGCVLKAC 203
Query: 126 SDLSFLDMGVGVHGMTFKAGF--DLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVS 183
+ + ++G VH + K GF + D+++ SL+ Y E A LV + V+
Sbjct: 204 AMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVA 263
Query: 184 WNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN-VELGREVHALV 242
W + +R +E +R + M + G++ + + +VL AC + + G++VHA
Sbjct: 264 WAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANA 323
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWL-ANEMDETDVVTWTTLINGYILNGDARSA 301
+ GF + ++R +++MY K G++K+A + + DET V W ++ Y+ NG A
Sbjct: 324 IKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEA 383
Query: 302 LMLCRVMLLEGVKPN 316
+ L M G+K +
Sbjct: 384 IKLLYQMKATGIKAH 398
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 13/283 (4%)
Query: 150 TFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMD 209
TF+ N LL M+++ G + + +FD M + SW + G E+A ++ M+
Sbjct: 124 TFI-NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLK 182
Query: 210 ----AGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWG--NMVVRNAMLDMYVK 263
+ + VL AC ++++ ELG++VHAL + GF + + +++ Y +
Sbjct: 183 HSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGE 242
Query: 264 CGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASL 323
+++A + +++ + V W + G+ + + M G+K N+ +++
Sbjct: 243 FRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNV 302
Query: 324 LSACG--SFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
L AC S G + G+ +HA AI+ ES+ ++ LI+MY K + KVF K+SK
Sbjct: 303 LKACSWVSDGGRS-GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVF-KSSKD 360
Query: 382 RTAP--WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFN 422
T+ WNA+++ ++ N + EAI+L QM ++ + N
Sbjct: 361 ETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 31/322 (9%)
Query: 206 RMMDAGVEPDCATVVSVLPACGLLKNVELG-REVHALVKEKGFWGNMVVRNAMLDMYVKC 264
R+MD+ P + S L +N + G E+ + + + N +L M+V C
Sbjct: 77 RLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSC 136
Query: 265 GQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK-----PNLVS 319
G++ + + M D +W + G I GD A L ML K P+ +
Sbjct: 137 GRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI- 195
Query: 320 VASLLSACGSFGSLNYGKCLHAWAIRQKL--ESEVIVETALIDMYAKCNCGNLSYKVFMK 377
+ +L AC GK +HA + E + + +LI Y + C + V +
Sbjct: 196 LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQ 255
Query: 378 TSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADL-KQ 436
S T W A ++ +E I+ F +M ++ + + F+++L A + ++D +
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 437 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXY 496
+H I+ GF + L+++Y K G + A +F
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVF-------------------- 355
Query: 497 GKHGHGEMAVSLFNQMVQSGVQ 518
K E +VS +N MV S +Q
Sbjct: 356 -KSSKDETSVSCWNAMVASYMQ 376
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 218/488 (44%), Gaps = 18/488 (3%)
Query: 77 RSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVG 136
R+ ++ ++R + + ++AL+LF M+ S LP + ++ + + D+ +
Sbjct: 35 RAFCNYREILRNGLHSLQFNEALDLFTHMVESR-PLPSIIDFTKLLNVIAKMKKFDVVIN 93
Query: 137 VHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQ-LVFDLMK---EQTVVSWNTMINGYF 192
+ G D + N L+ + + + A + +MK E +V++ ++ING+
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 193 RNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMV 252
NR EEA+ + N+M++ G++PD +++ + +V + ++ G ++V
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 253 VRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRVM 308
+ ++++ G+ ++A L M + DV+T+ LI+ ++ G A L M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 309 LLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCG 368
+ + PN+ + SL++ G ++ + + + +V+ T+LI+ + KC
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 369 NLSYKVFMKTSKK----RTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSL 424
+ + K+F + S+K T + L+ GF A ++F M+ + V P+ T+N L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 425 LPAYAVLADLKQAMNIHCYLIR---SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 481
L +K+A+ I + + G + ++L+ G L A +F +
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Query: 482 XXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDE 539
G K G + AV+LF + GV+PN +T+T+++ GL E
Sbjct: 454 REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHE 513
Query: 540 GLSLFKFM 547
LF+ M
Sbjct: 514 AHVLFRKM 521
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 187/427 (43%), Gaps = 42/427 (9%)
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
+ N ++N + ++++ A +MM G EPD T S++ L +E + +
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDA 298
E G ++V+ ++D K G + A L ++M+ DVV +T+L+NG +G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
R A L R M +KP++++ +L+ A G + L+ IR + + T+L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 359 IDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDV 414
I+ + C + + ++F K P + +L++GF V +A+++F +M K +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 415 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 474
+ T+ +L+ + + A + +++ G + ++L+ G + A
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 475 IFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 534
IF + + GV PN T+ +LH +
Sbjct: 409 IFEDM------------------------------QKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 535 GLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAV 591
G +++ L +F+ M ++ ++ + YT II + +AG++ +A NL ++P +KPN
Sbjct: 439 GKLEKALMVFEDM-RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 592 WGALLGA 598
+ ++
Sbjct: 498 YTTMISG 504
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 175/399 (43%), Gaps = 16/399 (4%)
Query: 199 EALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAML 258
EAL ++ M+++ P +L +K ++ + ++ G ++ N ++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 259 DMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVK 314
+ + + Q A +M E D+VT+T+LING+ L A+ + M+ G+K
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 315 PNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SY 372
P++V +++ + G +NY L + +V++ T+L++ CN G +
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN--GLCNSGRWRDAD 232
Query: 373 KVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAY 428
+ +K++ P +NAL+ F+ +A +L+ +M+ + P+ T+ SL+ +
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 429 AVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXX--X 486
+ + +A + + G + + L++ + KC + A IF +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 487 XXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKF 546
+G+ G +A +F+ MV GV PN T+ +LH + G V + L +F+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 547 MLKQHQ--IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM 583
M K+ + P + Y ++ L G+L A + M
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 121/589 (20%), Positives = 228/589 (38%), Gaps = 93/589 (15%)
Query: 71 FDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSF 130
F+ + + S + M++ Y + G H A F M G+T P + Y +I A +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGIT-PTSRIYTSLIHAYAVGRD 359
Query: 131 LDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK------------- 177
+D + + G ++ + ++ + AG E A FD K
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 178 --------------------------EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 211
+ + ++TM++GY ++ L V+ R+
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL---- 475
Query: 212 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAW 271
KE GF +V ++++Y K G++ +A
Sbjct: 476 -------------------------------KECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 272 WLANEMDETDV----VTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSAC 327
++ M E V T++ +ING++ D +A + M+ EG+KP+++ +++SA
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 328 GSFGSLNYGKCLHAWAIRQKLESEVIVET--ALIDMYAKCNCGNLSYKVFMKTSKKRTAP 385
G+++ + + QKL T +I YAK S +VF + P
Sbjct: 565 CGMGNMD--RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 386 ----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIH 441
+N L++G + + +A+++ +M + V + T+ ++ YA + D +A
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 442 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGH 501
L G + L+ K G + A + + G
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 502 GEM--AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH 559
G++ A L QM + GV+P+ T+TS + ACS AG ++ + M + + P +
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKT 801
Query: 560 YTCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVWGALLGACVSHENV 605
YT +I RA A Y ++ M IKP+ AV+ LL + +S ++
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/497 (18%), Positives = 198/497 (39%), Gaps = 52/497 (10%)
Query: 153 QNSLLAMYMNAGEKEQAQL-VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAG 211
+ SL + G+ QA + F+ + + + + M+ Y R A + RM G
Sbjct: 280 RKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARG 339
Query: 212 VEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQ----- 266
+ P S++ A + ++++ +KE+G ++V + ++ + K G
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 267 ------------------------------MKEAWWLANEMDE----TDVVTWTTLINGY 292
M+ A L EM+E + + T+++GY
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 293 ILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEV 352
+ D + L++ + + G P +V+ L++ G ++ + + ++ +
Sbjct: 460 TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNL 519
Query: 353 IVETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQ 408
+ +I+ + K ++ VF K+ P +N ++S F + AIQ K+
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 409 MLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGS 468
M +P TF ++ YA D+++++ + + R G + + + L++ +
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 469 LGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEM--AVSLFNQMVQSGVQPNQITFTS 526
+ A I + + L G G+ A F ++ G+ + T+ +
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 527 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDH-YTCIIDLLGRAGQLNDAYNLIRTMP- 584
+L AC +G + L++ K M ++ IP Y +ID R G + +A +LI+ M
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARN--IPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 585 --IKPNHAVWGALLGAC 599
+KP+ + + + AC
Sbjct: 758 EGVKPDIHTYTSFISAC 774
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 205/531 (38%), Gaps = 94/531 (17%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA-CSD-----LSFLDMGV 135
+N+++ Y G A L +M+ G +P Y I+I + C D LD+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCG-HMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVVSWNTMINGYFRNN 195
+ AG L+ +S +AG+ E+A F +++E
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA---FSVIRE----------------- 473
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
M+ G PD +T VL +EL + +K G ++
Sbjct: 474 -----------MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 256 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 311
M+D + K G +++A NEM E +VVT+T LI+ Y+ A L ML E
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
G PN+V+ ++L+ G G+ A I +++ V +DMY K N
Sbjct: 583 GCLPNIVTYSALID-----GHCKAGQVEKACQIFERMCGSKDVPD--VDMYFKQYDDN-- 633
Query: 372 YKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVL 431
+ + + ALL GF + V EA +L M ++ +P+ +++L+ +
Sbjct: 634 ------SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 432 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXX 491
L +A + + GF L S L+D
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLID------------------------------ 717
Query: 492 XXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQH 551
Y K ++A + ++M+++ PN + +T ++ G DE L + M+++
Sbjct: 718 ---RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ-MMEEK 773
Query: 552 QIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALLGAC 599
P V YT +ID G G++ L+ M K PN+ + L+ C
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 155/361 (42%), Gaps = 28/361 (7%)
Query: 145 GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWNTMINGYFRNNRAEEA 200
GF DT + +L NA + E A L+F+ MK V ++ M++ + + E+A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 201 LRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDM 260
+ +N M + G P+ T +++ A K V E+ + +G N+V +A++D
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 261 YVKCGQMKEAWWLANEM--------------------DETDVVTWTTLINGYILNGDARS 300
+ K GQ+++A + M + +VVT+ L++G+ +
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALID 360
A L M +EG +PN + +L+ G L+ + + + + ++LID
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 361 MYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
Y K +L+ KV K + AP + ++ G EA +L + M K QP
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+ T+ +++ + ++ ++ + + + G +L+D K G+L AH++
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 477 N 477
Sbjct: 838 E 838
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 123/560 (21%), Positives = 206/560 (36%), Gaps = 121/560 (21%)
Query: 113 PDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQL 171
P TY +I+A LD +H A +D F G+ +E L
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 172 VFDLMKEQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKN 231
V V + +I+G + EEA+ NRM P+ T ++L CG L
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL--CGCLNK 350
Query: 232 VELGREVHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLING 291
+LGR L NM+ M E + + ++ + +L++
Sbjct: 351 KQLGRCKRVL--------NMM--------------MMEGCYPSPKI-------FNSLVHA 381
Query: 292 YILNGDARSALMLCRVMLLEGVKPNLVSVASLL-SACGSFGSLNYGKC----LHAWAIRQ 346
Y +GD A L + M+ G P V L+ S CG SLN C L A +
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN---CDLLDLAEKAYSE 438
Query: 347 KLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLF 406
L + V++ + + +C C Y+ +A +
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYE---------------------------KAFSVI 471
Query: 407 KQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC 466
++M+ + PD +T++ +L + ++ A + + R G + + +I+VD + K
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 467 GSLGYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTS 526
G + E A FN+M + G PN +T+T+
Sbjct: 532 GLI---------------------------------EQARKWFNEMREVGCTPNVVTYTA 558
Query: 527 VLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM--- 583
++HA A V LF+ ML + +P + Y+ +ID +AGQ+ A + M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 584 ----------------PIKPNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNY 626
+PN +GALL G C SH E ++ + E N Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 627 VLLANLYAAVGRWRDAENVR 646
L + VG+ +A+ V+
Sbjct: 678 DALIDGLCKVGKLDEAQEVK 697
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 139/364 (38%), Gaps = 44/364 (12%)
Query: 72 DTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFL 131
D + ++ ++ ++ + + R +A L M G P+ Y +I + L
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE-PNQIVYDALIDGLCKVGKL 690
Query: 132 DMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT----VVSWNTM 187
D V + GF + +SL+ Y ++ A V M E + VV + M
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGF 247
I+G + + +EA ++ M + G +P+ T +++ G++ +E E+ + KG
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Query: 248 WGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRV 307
N V ++D K G + A L EM +T W T GY
Sbjct: 811 APNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH---WPTHTAGY--------------R 853
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNC 367
++EG + LL G + + + V LID K
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPF----------------LSVYRLLIDNLIKAQR 897
Query: 368 GNLSYKV------FMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATF 421
++ ++ F T ++ +N+L+ + V A QLF +M K V P+ +F
Sbjct: 898 LEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
Query: 422 NSLL 425
SL+
Sbjct: 958 CSLI 961
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 202/487 (41%), Gaps = 18/487 (3%)
Query: 81 SWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGM 140
++N +++ + + A+ + +M GL +PD T+ +++ + LD + +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGL-VPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 141 TFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQT-----VVSWNTMINGYFRNN 195
+ G N ++ + G E A M Q ++NT++NG +
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 196 RAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRN 255
+ A+ + + M+ G +PD T SV+ L V+ EV + + N V N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 256 AMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLE 311
++ K Q++EA LA + DV T+ +LI G L + R A+ L M +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 312 GVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLS 371
G +P+ + L+ + S G L+ + VI LID + K N +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 372 YKVFMKTS----KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPA 427
++F + + + +N L+ G + V +A QL QM+++ +PD T+NSLL
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 428 YAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXX 487
+ D+K+A +I + +G + L+ K G + A + I +
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 488 XXXXXXXXYG--KHGHGEMAVSLFNQMV-QSGVQPNQITFTSVLHA-CSHAGLVDEGLSL 543
G + A++LF +M+ Q+ P+ +++ V C+ G + E +
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 544 FKFMLKQ 550
+L++
Sbjct: 670 LVELLEK 676
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 380 KKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMN 439
K + +N L+ +R AI + + M + PD TF +++ Y DL A+
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 440 IHCYLIRSGFLYRLEVASILVDIYSKCG----SLGYAHHIFN---IIPLXXXXXXXXXXX 492
I ++ G + +++V + K G +L + + N P
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP----DQYTFNTL 301
Query: 493 XXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQ 552
K GH + A+ + + M+Q G P+ T+ SV+ G V E + + M+ +
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR-D 360
Query: 553 IIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMPIK---PNHAVWGALL-GACVSH 602
P Y +I L + Q+ +A L R + K P+ + +L+ G C++
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 211/507 (41%), Gaps = 109/507 (21%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
++++++ ++ Y + G +A+++F M GL P+ TY +I AC G
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLR-PNLVTYNAVIDAC----------GK 315
Query: 138 HGMTFKA-----------GFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK----EQTVV 182
GM FK G D NSLLA+ G E A+ +FD M EQ V
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 183 SWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV 242
S+NT+++ + + + A + +M V ++P
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQM----------PVKRIMP------------------ 407
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDA 298
N+V + ++D + K G+ EA L EM D V++ TL++ Y G +
Sbjct: 408 -------NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
AL + R M G+K ++V+ +LL G G + K + R+ + ++ + L
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 359 IDMYAKCNCGNLSYKVF--MKTSKKRT--APWNALLSGFIHNSLVREAIQLFKQMLVKDV 414
ID Y+K + ++F K++ R ++AL+ N LV A+ L +M + +
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 415 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 474
P+ T+NS++ A+ A + ++ + YS GSL ++
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSAD-----------------------YSNGGSLPFSSS 617
Query: 475 IFN---------IIPLXXXXXXXXXXXXXXYGKHGHGEMA--VSLFNQMVQSGVQPNQIT 523
+ +I L + G E++ + +F +M Q ++PN +T
Sbjct: 618 ALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT 677
Query: 524 FTSVLHACSH------AGLVDEGLSLF 544
F+++L+ACS A ++ E L LF
Sbjct: 678 FSAILNACSRCNSFEDASMLLEELRLF 704
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 156/366 (42%), Gaps = 47/366 (12%)
Query: 246 GFWGNMVVR-NAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNG-DAR 299
G +GN V +A++ Y + G +EA + N M E ++VT+ +I+ G + +
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 300 SALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
M GV+P+ ++ SLL+ C G + L +++E +V L+
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQ 415
D K +L++++ + KR P ++ ++ GF EA+ LF +M +
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 416 PDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 475
D ++N+LL Y + ++A++I L + I D+ + LG
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDI---------LREMASVGIKKDVVTYNALLG----- 487
Query: 476 FNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
YGK G + +F +M + V PN +T+++++ S G
Sbjct: 488 -------------------GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVW 592
L E + +F+ K + V Y+ +ID L + G + A +LI M I PN +
Sbjct: 529 LYKEAMEIFR-EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTY 587
Query: 593 GALLGA 598
+++ A
Sbjct: 588 NSIIDA 593
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 9/267 (3%)
Query: 76 QRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGV 135
Q ++N+++ + + G A NLF EM + + D F+Y ++ A +D+
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE-QDVFSYNTLLDAICKGGQMDLAF 394
Query: 136 GVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTV----VSWNTMINGY 191
+ + ++++ + AG ++A +F M+ + VS+NT+++ Y
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 192 FRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNM 251
+ R+EEAL + M G++ D T ++L G + ++V +K + N+
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL 514
Query: 252 VVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDARSALMLCRV 307
+ + ++D Y K G KEA + E DVV ++ LI+ NG SA+ L
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 308 MLLEGVKPNLVSVASLLSACGSFGSLN 334
M EG+ PN+V+ S++ A G +++
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 508 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
F++M ++GVQP++ITF S+L CS GL + +LF M + +I V Y ++D +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAI 384
Query: 568 GRAGQLNDAYNLIRTMPIK---PNHAVWGALL-GACVSHENVELGEVAARWTFELEPENT 623
+ GQ++ A+ ++ MP+K PN + ++ G + E + + +
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 624 GNYVLLANLYAAVGRWRDAENVRDMVNVVGLRK 656
+Y L ++Y VGR +A ++ + VG++K
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 496 YGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
YG+ G E A+S+FN M + G++PN +T+ +V+ AC G+ + ++ F ++++ + P
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 556 LVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELG-EVA 611
+ ++ + R G A NL M I+ + + LL A ++L E+
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 612 ARWTFELEPENTGNYVLLANLYAAVGRWRDAENVRDMVNVVGL 654
A+ + N +Y + + +A GR+ +A N+ + +G+
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/505 (20%), Positives = 194/505 (38%), Gaps = 40/505 (7%)
Query: 83 NTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTF 142
N +R V+ G + M++ G +PD +I+ L + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHG-NVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 143 KAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMK-EQTVVSWNTMINGYFRNNRAEEAL 201
+G D N +++ Y AGE A V D M VV++NT++ + + ++A+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 202 RVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAMLDMY 261
V +RM+ PD T + + A ++ G M + + M D
Sbjct: 225 EVLDRMLQRDCYPDVITYTIL---------------IEATCRDSGVGHAMKLLDEMRDRG 269
Query: 262 VKCGQMKEAWWLANEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVA 321
DVVT+ L+NG G A+ M G +PN+++
Sbjct: 270 CT----------------PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 322 SLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKK 381
+L + S G + L A +R+ V+ LI+ + + + K +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 382 RTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
P +N LL GF + AI+ ++M+ + PD T+N++L A ++ A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 438 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXXXXXXXXXXXYG 497
+ I L G L + ++D +K G G A + + + G
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 498 --KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIP 555
+ G + A+ F++ + G++PN +TF S++ + D + FM+ + P
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG-CKP 552
Query: 556 LVDHYTCIIDLLGRAGQLNDAYNLI 580
YT +I+ L G +A L+
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELL 577
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 181/478 (37%), Gaps = 48/478 (10%)
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
V N + R EE + M+ G PD +++ L ++ +
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD-ETDVVTWTTLINGYILNGDARS 300
++ G +++ N M+ Y K G++ A + + M DVVT+ T++ +G +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 301 ALMLCRVMLLEGVKPNLVSVASLLSA-CGSFGSLNYGKCLHAWAIRQKLESEVIVETALI 359
A+ + ML P++++ L+ A C G HA + ++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSG------VGHAMKLLDEMRD--------- 267
Query: 360 DMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNA 419
+ +N L++G + EAI+ M QP+
Sbjct: 268 -----------------RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 420 TFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 479
T N +L + A + ++R GF + +IL++ + G LG A I +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 480 PLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLV 537
P +G K + A+ +MV G P+ +T+ ++L A G V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 538 DEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLI---RTMPIKPNHAVWGA 594
++ + + L P++ Y +ID L +AG+ A L+ R +KP+ + +
Sbjct: 431 EDAVEILN-QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 595 LLGACVSHENVELGEVAARWTFELEPENTG---NYVLLANLYAAVGRWRDAENVRDMV 649
L+G +S E G+V F E E G N V ++ + + R + D +
Sbjct: 490 LVGG-LSRE----GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 144/358 (40%), Gaps = 50/358 (13%)
Query: 70 LFDTLPQR----SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKA- 124
L D + R + ++N ++ + GR +A+ +M SG P+ T+ II+++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSM 319
Query: 125 CSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----T 180
CS ++D + M + GF N L+ G +A + + M +
Sbjct: 320 CSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 181 VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHA 240
+S+N +++G+ + + + A+ RM+ G PD T ++L A VE E+
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 241 LVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNG 296
+ KG ++ N ++D K G+ +A L +EM + D +T+++L+ G G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
A+ G++PN V +F S+ G C R
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAV----------TFNSIMLGLCKSRQTDRA---------- 538
Query: 357 ALIDMYAKCNCGNLSYKVFM--KTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVK 412
+ + VFM + K + L+ G + + +EA++L ++ K
Sbjct: 539 -------------IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 186/403 (46%), Gaps = 42/403 (10%)
Query: 178 EQTVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGRE 237
E +V+ N+++NG+ NR +A+ + ++M++ G +PD T +++ L
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 238 VHALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYI 293
+ + ++G ++V A+++ K G A L N+M+ E +VV ++T+I+
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 294 LNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVI 353
AL L M +GV+PN+++ +SL+S ++G + L + I +K+ ++
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 354 VETALIDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQM 409
+ALID + K + K++ + K+ P +++L++GF + EA Q+ + M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 410 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 469
+ KD P+ T+N+L+ + + + M + + + G + + L+
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI--------- 435
Query: 470 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
H F + + A +F QMV GV PN +T+ +L
Sbjct: 436 ---HGFF---------------------QARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQ 572
G + + + +F++ L++ + P + Y +I+ + +AG+
Sbjct: 472 GLCKNGKLAKAMVVFEY-LQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 168/368 (45%), Gaps = 15/368 (4%)
Query: 246 GFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILNGDARSA 301
G+ ++V N++L+ + ++ +A L ++M E D VT+TTLI+G L+ A A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 302 LMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDM 361
+ L M+ G +P+LV+ ++++ G + L K+E+ V++ + +ID
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 362 YAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPD 417
K + + +F + K P +++L+S + +A +L M+ + + P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 418 NATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 477
TF++L+ A+ L +A ++ +I+ + S L++ + LG A +
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 478 IIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAG 535
++ G K + + LF +M Q G+ N +T+T+++H A
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 536 LVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDA---YNLIRTMPIKPNHAVW 592
D +FK M+ + P + Y ++D L + G+L A + ++ ++P+ +
Sbjct: 443 DCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 593 GALL-GAC 599
++ G C
Sbjct: 502 NIMIEGMC 509
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 130/291 (44%), Gaps = 44/291 (15%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
++T++ + DALNLF EM + G+ P+ TY
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVR-PNVITY----------------------- 291
Query: 142 FKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGYFRNNRA 197
+SL++ N G + ++L+ D+++ + +V+++ +I+ + + +
Sbjct: 292 ------------SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 198 EEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVVRNAM 257
+A ++Y M+ ++P+ T S++ +L + +++ L+ K N+V N +
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 258 LDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVMLLEGV 313
++ + K ++ + L EM + + VT+TTLI+G+ D +A M+ + M+ GV
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 314 KPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAK 364
PN+++ LL G L + + R +E ++ +I+ K
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 19/300 (6%)
Query: 315 PNLVSVASLLSACGSFGS----LNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL 370
P+++ + LLSA +++G+ + I L + I LI+ + +C+ +L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI----LINCFCRCSRLSL 131
Query: 371 SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLP 426
+ + K K P N+LL+GF H + + +A+ L QM+ +PD TF +L+
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 427 AYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLXXXXX 486
+ +A+ + +++ G L +V+ K G A ++ N +
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 487 XXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLF 544
K+ H + A++LF +M GV+PN IT++S++ + G + L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 545 KFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALL-GACV 600
M+ + +I P + ++ +ID + G+L A L M I PN + +L+ G C+
Sbjct: 312 SDMI-ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 195/434 (44%), Gaps = 50/434 (11%)
Query: 180 TVVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVH 239
++V + ++ + N+ + + +Y++M + G+ D + ++ + L +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 240 ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE----TDVVTWTTLINGYILN 295
+ + GF ++V ++L+ + + + +EA L + MD +VV + T+ING N
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 296 GDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVE 355
D +AL + M +G++ + V+ +L+S + G L +++K++ VI
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 356 TALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQM 409
TALID + K GNL + ++ + ++ P +N+L++GF + + +A +F M
Sbjct: 258 TALIDTFVKE--GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 410 LVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 469
+ K PD T+N+L+ + ++ M + C + G + + L+ Y + G L
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 470 GYAHHIFNIIPLXXXXXXXXXXXXXXYGKHGHGEMAVSLFNQMVQSGVQPNQITFTSVLH 529
A + FN+MV GV P+ +T+ +L
Sbjct: 376 NVAQKV---------------------------------FNRMVDCGVSPDIVTYNILLD 402
Query: 530 ACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQLNDAYNLIRTMP---IK 586
+ G +++ L + + + K + ++ Y II L R +L +A+ L R++ +K
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIIT-YNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 587 PNHAVWGALL-GAC 599
P+ + ++ G C
Sbjct: 462 PDAIAYITMISGLC 475
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 174/394 (44%), Gaps = 19/394 (4%)
Query: 70 LFDTLPQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLS 129
+ + P S+ + ++ + +M + + L+ +M + G++ D +++ I+I S
Sbjct: 70 MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS-HDLYSFTILIHCFCRCS 128
Query: 130 FLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKE----QTVVSWN 185
L + + + G K GF SLL + ++A + D M VV +N
Sbjct: 129 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 188
Query: 186 TMINGYFRNNRAEEALRVYNRMMDAGVEPDCA---TVVSVLPACGLLKNVELGREVHALV 242
T+ING +N AL V+ M G+ D T++S L G + + R + +V
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG--RWTDAARLLRDMV 246
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDETDVV----TWTTLINGYILNGDA 298
K K N++ A++D +VK G + EA L EM VV T+ +LING+ ++G
Sbjct: 247 KRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 299 RSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETAL 358
A + +M+ +G P++V+ +L++ + G L Q L + L
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 359 IDMYAKCNCGNLSYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDV 414
I Y + N++ KVF + +P +N LL +N + +A+ + + + ++
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 415 QPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG 448
D T+N ++ LK+A + L R G
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 82 WNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMT 141
+ ++ +V+ G +A NL+ EMI + +P+ FTY +I G +HG
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSV-VPNVFTYNSLIN----------GFCIHGCL 305
Query: 142 FKAG--FDL--------DTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQTVV----SWNTM 187
A FDL D N+L+ + + E +F M Q +V ++NT+
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 188 INGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALV----- 242
I+GY + + A +V+NRM+D GV PD T ++L C L N G+ ALV
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY-NILLDC-LCNN---GKIEKALVMVEDL 420
Query: 243 KEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMD----ETDVVTWTTLINGYILNGDA 298
++ +++ N ++ + ++KEAW L + + D + + T+I+G G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 299 RSALMLCRVMLLEGVKPN 316
R A LCR M +G P+
Sbjct: 481 READKLCRRMKEDGFMPS 498
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 157/362 (43%), Gaps = 17/362 (4%)
Query: 78 SLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGV 137
S+ + +++ + Q R +A++L M G +P+ Y +I L+ + V
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 138 HGMTFKAGFDLDTFVQNSLLAMYMNAGE-KEQAQLVFDLMKEQ---TVVSWNTMINGYFR 193
K G D N+L++ N+G + A+L+ D++K + V+ + +I+ + +
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 194 NNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHALVKEKGFWGNMVV 253
EA +Y M+ V P+ T S++ + + + + L+ KG + ++V
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 254 RNAMLDMYVKCGQMKEAWWLANEMDET----DVVTWTTLINGYILNGDARSALMLCRVML 309
N ++ + K ++++ L EM D T+ TLI+GY G A + M+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 310 LEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGN 369
GV P++V+ LL + G + K L QK E +V + T I + C
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIE--KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 370 L--SYKVFMKTSKKRTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNS 423
L ++ +F ++K P + ++SG L REA +L ++M P ++
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 424 LL 425
L
Sbjct: 505 TL 506
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/552 (20%), Positives = 228/552 (41%), Gaps = 63/552 (11%)
Query: 102 FVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYM 161
F +MI G LP I++K D ++ V+ + G N++L
Sbjct: 191 FEKMIRKGF-LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 162 NAGEKEQAQLVFDLMKEQTV----VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCA 217
AG+ E+ ++ MK + + V++N +ING+ +N + EEA R + M +G
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF---AV 306
Query: 218 TVVSVLPACGLLKNVELGREVHALVKE---KGFWGNMVVRNAMLDMYVKCGQMKEAWWLA 274
T S P L + + E G + N + G++ +A L
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 275 NEMDETDVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN 334
+ M DVV++ TL++GYI G A +L + + P++V+ +L+ G+L
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 335 YGKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFI 394
Q+L+ E+ + D+ + L+ GF+
Sbjct: 427 GA---------QRLKEEMTTQLIFPDVIT----------------------YTTLVKGFV 455
Query: 395 HNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQAMNIHCYLIRSG-FLYRL 453
N + A +++ +ML K ++PD + + L D +A +H ++ + L
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 454 EVASILVDIYSKCGSL----GYAHHIFNI--IPLXXXXXXXXXXXXXXYGKHGHGEMAVS 507
+ ++ +D K G+L + IF + +P Y ++G +MA +
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP----DHVTYTTVIRGYLENGQFKMARN 571
Query: 508 LFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLL 567
L+++M++ + P+ IT+ +++ + AG +++ + +K+ + P V + ++ +
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ-YSTEMKKRGVRPNVMTHNALLYGM 630
Query: 568 GRAGQLNDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWT----FELEP 620
+AG +++AY + M I PN + L+ E E EV + E+EP
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE--EVVKLYKEMLDKEIEP 688
Query: 621 ENTGNYVLLANL 632
+ + L +L
Sbjct: 689 DGYTHRALFKHL 700
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 168/396 (42%), Gaps = 57/396 (14%)
Query: 80 FSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKACSDLSFLDMGVGVHG 139
+S+N ++ Y + G DA + EM+++G+ P TY I I A D +D +
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI-YPTTSTYNIYICALCDFGRIDDAREL-- 365
Query: 140 MTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFD------------------------- 174
++ A D+ ++ N+L+ Y+ G+ +A L+FD
Sbjct: 366 LSSMAAPDVVSY--NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 175 -------LMKEQT-------VVSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVV 220
L +E T V+++ T++ G+ +N A VY+ M+ G++PD
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 221 SVLPACGLLKNVELGREVH-ALVKEKGFWGNMVVRNAMLDMYVKCGQMKEAWWLANEMDE 279
+ L + + +H +V ++ + N +D K G + +A ++
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 280 T----DVVTWTTLINGYILNGDARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNY 335
D VT+TT+I GY+ NG + A L ML + + P++++ L+ G L
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 336 GKCLHAWAIRQKLESEVIVETALIDMYAKCNCGNL--SYKVFMKTSKKRTAP----WNAL 389
++ + V+ AL +Y C GN+ +Y+ K ++ P + L
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNAL--LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 390 LSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLL 425
+S E ++L+K+ML K+++PD T +L
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 223/519 (42%), Gaps = 51/519 (9%)
Query: 70 LFDTL----PQRSLFSWNTMMRMYVQMGRPHDALNLFVEMIHSGLTLPDNFTYPIIIKAC 125
LFD + P + +++ ++ + + G AL + +M GLT P F II+
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT-PSVFHVHTIIQGW 419
Query: 126 SDLSFLDMGVGVHGMTFKAGFDLDTFVQNSLLAMYMNAGEKEQAQLVFDLMKEQ----TV 181
+ + + +F+ G + FV N++L+ G+ ++A + M+ + V
Sbjct: 420 LKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
VS+N ++ G+ R + A V++ +++ G++P+ T ++ C + + EV
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 242 VKEKGFWGNMVVRNAMLDMYVKCGQMKEAW-WLANEMDETDV----VTWTTLINGYILNG 296
+ N VV +++ K GQ +A LAN ++E + +++ ++I+G+ G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLNYGKCLHAWAIRQKLESEVIVET 356
+ SA+ M G+ PN+++ SL++ G + A +R ++++
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMN-----GLCKNNRMDQALEMRDEMKN------ 647
Query: 357 ALIDMYAKCNCGNLSYKVFMKTSKKRTAPWNALLSGFIHNSLVREAIQLFKQMLVKDVQP 416
K K + AL+ GF S + A LF ++L + + P
Sbjct: 648 --------------------KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 417 DNATFNSLLPAYAVLADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 476
+NSL+ + L ++ A++++ +++ G L + L+D K G+L A ++
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 477 NIIPLXXXXXXXXXXXXXXYG--KHGHGEMAVSLFNQMVQSGVQPNQITFTSVLHACSHA 534
+ G K G V +F +M ++ V PN + + +V+
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 535 GLVDEGLSLFKFMLKQHQIIPLVDHYTCIIDLLGRAGQL 573
G +DE L ML + I+P D T I + G+ G L
Sbjct: 808 GNLDEAFRLHDEMLDKG-ILP--DGATFDILVSGQVGNL 843
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 185/467 (39%), Gaps = 52/467 (11%)
Query: 182 VSWNTMINGYFRNNRAEEALRVYNRMMDAGVEPDCATVVSVLPACGLLKNVELGREVHAL 241
V+ ++ R + EAL V +R ++ G EPD + AC ++ + +
Sbjct: 234 VTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLRE 293
Query: 242 VKEKGFW-GNMVVRNAMLDMYVKCGQMKEAWWLANEM----DETDVVTWTTLINGYILNG 296
+KEK + +++ VK G M +A L +EM +VV T+LI G+ N
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 297 DARSALMLCRVMLLEGVKPNLVSVASLLSACGSFGSLN-----YGK-------------- 337
D SAL+L M EG PN V+ + L+ G + Y K
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 338 -CLHAWAIRQKLESEVIV-----ETALIDMYAKCNC----------GNLSYKVFMKTSKK 381
+ W QK E + + ET L +++ CN + + ++ K +
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFV-CNTILSWLCKQGKTDEATELLSKMESR 472
Query: 382 RTAP----WNALLSGFIHNSLVREAIQLFKQMLVKDVQPDNATFNSLLPAYAVLADLKQA 437
P +N ++ G + A +F +L K ++P+N T++ L+ D + A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 438 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLXXXXXXXXXXXXXXY 496
+ + ++ S V +++ K G A + N+I
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 497 GKHGHGEM--AVSLFNQMVQSGVQPNQITFTSVLHACSHAGLVDEGLSLFKFMLKQHQII 554
G GEM AV+ + +M +G+ PN IT+TS+++ +D+ L + M K +
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNKGVK 651
Query: 555 PLVDHYTCIIDLLGRAGQLNDAYNLIRTM---PIKPNHAVWGALLGA 598
+ Y +ID + + A L + + P+ ++ +L+
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698