Miyakogusa Predicted Gene

Lj5g3v2298000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2298000.1 Non Chatacterized Hit- tr|F8JS74|F8JS74_STREN
Putative uncharacterized protein OS=Streptomyces
cattl,33.33,4e-16,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; LCM,Leucine carboxyl methyltransferase;
n,CUFF.57268.1
         (216 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42760.1 | Symbols:  | Leucine carboxyl methyltransferase | c...   286   5e-78
AT5G42760.2 | Symbols:  | Leucine carboxyl methyltransferase | c...   272   1e-73

>AT5G42760.1 | Symbols:  | Leucine carboxyl methyltransferase |
           chr5:17148953-17150105 FORWARD LENGTH=348
          Length = 348

 Score =  286 bits (733), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 136/205 (66%), Positives = 162/205 (79%), Gaps = 3/205 (1%)

Query: 1   MDTRAYRLSFLKDSDVFEVDFSEVLEVKTTILQAAEESTYHRQHIMSKAKSLTRVAADIR 60
           MD R+YRL+ L  SDVFEVDF +VLE K +++QAA  S   R  +   AKSL RVA DIR
Sbjct: 141 MDARSYRLNCLNKSDVFEVDFQDVLETKASLVQAAVNS---RDELRMTAKSLVRVAIDIR 197

Query: 61  ENDWMEKLEVAGFLPQKSTVWILEGILYYLTQSQAMQVLGYLANNCVLTHTVLIADFMNK 120
           +NDW E+L+ +GFLP+ +TVW+LEGILYYL+ ++AMQVL  +A  C LT TVL+ADFMNK
Sbjct: 198 DNDWFEQLKKSGFLPEINTVWVLEGILYYLSHTEAMQVLNLIAEKCGLTSTVLLADFMNK 257

Query: 121 PSTTLSNSAFQFYSDWPDHLLPSMGFPHVKLSQIGDPDAHFGLLNDPLNLFDKLRGLPRS 180
           PS TL NS F FYSDWPD LLP++GF HVKLSQIGDPDA+FGLL+DP NLF+KL  LPR+
Sbjct: 258 PSATLPNSVFHFYSDWPDQLLPTLGFSHVKLSQIGDPDANFGLLHDPRNLFNKLLRLPRT 317

Query: 181 LHTNPDDGTPCCRLYLVEASGSPDQ 205
              +PDDG PCCRLYLVEASGSP Q
Sbjct: 318 AQIHPDDGKPCCRLYLVEASGSPPQ 342


>AT5G42760.2 | Symbols:  | Leucine carboxyl methyltransferase |
           chr5:17148965-17150364 FORWARD LENGTH=364
          Length = 364

 Score =  272 bits (695), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 154/196 (78%), Gaps = 3/196 (1%)

Query: 1   MDTRAYRLSFLKDSDVFEVDFSEVLEVKTTILQAAEESTYHRQHIMSKAKSLTRVAADIR 60
           MD R+YRL+ L  SDVFEVDF +VLE K +++QAA  S   R  +   AKSL RVA DIR
Sbjct: 137 MDARSYRLNCLNKSDVFEVDFQDVLETKASLVQAAVNS---RDELRMTAKSLVRVAIDIR 193

Query: 61  ENDWMEKLEVAGFLPQKSTVWILEGILYYLTQSQAMQVLGYLANNCVLTHTVLIADFMNK 120
           +NDW E+L+ +GFLP+ +TVW+LEGILYYL+ ++AMQVL  +A  C LT TVL+ADFMNK
Sbjct: 194 DNDWFEQLKKSGFLPEINTVWVLEGILYYLSHTEAMQVLNLIAEKCGLTSTVLLADFMNK 253

Query: 121 PSTTLSNSAFQFYSDWPDHLLPSMGFPHVKLSQIGDPDAHFGLLNDPLNLFDKLRGLPRS 180
           PS TL NS F FYSDWPD LLP++GF HVKLSQIGDPDA+FGLL+DP NLF+KL  LPR+
Sbjct: 254 PSATLPNSVFHFYSDWPDQLLPTLGFSHVKLSQIGDPDANFGLLHDPRNLFNKLLRLPRT 313

Query: 181 LHTNPDDGTPCCRLYL 196
              +PDDG PCCRLYL
Sbjct: 314 AQIHPDDGKPCCRLYL 329