Miyakogusa Predicted Gene

Lj5g3v2297840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2297840.1 Non Chatacterized Hit- tr|C5WTV9|C5WTV9_SORBI
Putative uncharacterized protein Sb01g043940
OS=Sorghu,31.73,0.000000000000006,PUTATIVE UNCHARACTERIZED PROTEIN
B11N2.240 (PUTATIVE UNCHARACTERIZED PROTEIN),NULL; AUXILIN/CYCLIN
G,CUFF.57291.1
         (662 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75100.1 | Symbols: JAC1 | J-domain protein required for chlo...   239   5e-63
AT4G36520.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   143   5e-34
AT4G12770.2 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   141   1e-33
AT4G12770.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   141   1e-33
AT4G12780.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   140   3e-33
AT4G12780.2 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   139   6e-33
AT1G21660.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   137   2e-32
AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein | chr1:282610...   127   3e-29
AT1G30280.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   112   9e-25

>AT1G75100.1 | Symbols: JAC1 | J-domain protein required for
           chloroplast accumulation response 1 |
           chr1:28191108-28193769 REVERSE LENGTH=651
          Length = 651

 Score =  239 bits (609), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 239/722 (33%), Positives = 340/722 (47%), Gaps = 131/722 (18%)

Query: 1   METFNSSQRESIVLGHNNL--LIRRPSERNSDVDFNDVFGGPP-RRSTVNXXXXXXXX-- 55
           M+T  SS  E+++LG N+   ++R P   + D+DF DVFGGPP RRS V           
Sbjct: 1   MQTLPSS--ETVLLGSNSAPPVLRSPGGDDVDIDFGDVFGGPPKRRSKVTSNEVTRHSFS 58

Query: 56  ------------------XXXKPVFGGEDNGSSNRRRYYASKSDDFYDDIFGGDECRSAC 97
                                KPVFG  ++ SS RRR+    +DDF+DDIF  +E   + 
Sbjct: 59  ESALRRRDVIVDVGDLLPQDEKPVFG--EDTSSVRRRFT---TDDFFDDIFRVNE---SS 110

Query: 98  STPKRRDSAGADPFSSAAVLSPAALEPLAFSLPPV--FSLPAKLTKGVDLRRLGSPTSRN 155
           S P  R            +LSPA     +        FSLPAK T+ +    L +  S N
Sbjct: 111 SLPGSR------------ILSPAHKPESSSGTSSPSQFSLPAKATE-IPTFNLAATRSLN 157

Query: 156 INDGITASNLLVSPDSHSSRVSTVAPQRKELKNDIKPPYRQSILSQEFSNLSTSDKADKG 215
            N    +S+ L    S +  VST     K   +D   P +  +               KG
Sbjct: 158 KNKETVSSSPLSRTSSKADVVSTA----KSYSDDCDDPPQVFVTG-------------KG 200

Query: 216 ISNMKQETSVTEVSPNTFHFSIYKWASKGVVPVVMPLRTERISRMKDKVKHERCSSTEDW 275
                            FHFSIYKW +KGV PVV+   + R+S M  K +        D+
Sbjct: 201 ---------------RQFHFSIYKWPNKGV-PVVI-WGSSRLSSMS-KAEETTPVPLSDY 242

Query: 276 ----VVSDITTENDNPVPHNGSSLTENGKQNVSTTSATDSDQIVEQIVSSNAQPDTLSSA 331
               VV  +    +       S L +  K ++        ++  E  + S      +S A
Sbjct: 243 RKTSVVEKLGKNEEGDGKSGLSGLKDVKKTSLKRPGVQTKEEKTETDLKSEQAFFGVSKA 302

Query: 332 QTISKNVTEAESSTHSMSEMNYNGKTEAGIGTQKLGSKSLHSLINQR-EDYGEKTSRERE 390
           +    NV   +S     SE  ++G ++A   T     K LHS+ ++  E   EK   ERE
Sbjct: 303 R--EANVKPLDSVE---SEQAFSGVSKAHEATT---VKPLHSIFHEEDERQDEKIVSERE 354

Query: 391 EHVTKSTKKLSSTF-DVTMNPKKPLRKSFSLRDGGHSKATSQVSSSLGENMGKGRVKGKV 449
               KS  K + +F + +   KK      SL        +S  SSS    +GK  VKGKV
Sbjct: 355 VRKGKSKAKNTRSFTEDSRTKKKSQGTKSSLDSSPIPDKSSFASSSAAPEVGKDGVKGKV 414

Query: 450 KDFVQIFNQEPVTKPKVESKSRFQSSSYKQRRASRTN----------------------- 486
            DFV+IF++        ES    QSS ++ +   +T+                       
Sbjct: 415 SDFVKIFSKGASVGAGGESLG--QSSRWRAKETPKTDIIHDGSNAKETVNIPDQQKKSTP 472

Query: 487 ----NNVEDDPEQSTTEK-SATDTANVSANNFSQQDDISASAIPDISFTVIGDKDESFHD 541
                N +  P QST +K S  ++ N  A   + Q++      P  + T   D DE FH 
Sbjct: 473 DIPAMNRDQKPSQSTQKKDSDRESMNYKAPGDTVQEERQE---PSTTHTTSEDIDEPFHV 529

Query: 542 NFTIQVLDQDDGEALQ-NQEKQQLQVIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWK 600
           NF ++ + QD+ +  + N++ ++++ ID KI++WS GK GN+RSLLSTLQ++LW GSGWK
Sbjct: 530 NFDVEDITQDENKMEEANKDAEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWK 589

Query: 601 PVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQFNNVG 660
           PVPL+D+IEGNAV++SYQRALL LHPDKLQQKGA+++QKY AEKVF++LQEAW  FN +G
Sbjct: 590 PVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 649

Query: 661 AL 662
            +
Sbjct: 650 PV 651


>AT4G36520.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein |
            chr4:17230589-17235435 REVERSE LENGTH=1422
          Length = 1422

 Score =  143 bits (360), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 79/96 (82%)

Query: 565  QVIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQRALLCL 624
            + +D ++++WS GKEGN+R+LLSTLQ++L P SGW+P+PL ++I   AVKR+Y++A LC+
Sbjct: 1326 ETLDTEVKRWSSGKEGNIRALLSTLQYILGPESGWQPLPLTEVITSAAVKRAYRKATLCV 1385

Query: 625  HPDKLQQKGATSDQKYTAEKVFDILQEAWTQFNNVG 660
            HPDKLQQ+GA   QKY  EKVFD+L+EAW +FN+ G
Sbjct: 1386 HPDKLQQRGANIHQKYICEKVFDLLKEAWNRFNSEG 1421


>AT4G12770.2 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr4:7506736-7511408 REVERSE LENGTH=889
          Length = 889

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 76/93 (81%)

Query: 566 VIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQRALLCLH 625
            +D +I++W  GKEGN+R+LLSTLQ+VLWP  GW+PV L D+I G +VK+ Y++A LC+H
Sbjct: 793 TLDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIH 852

Query: 626 PDKLQQKGATSDQKYTAEKVFDILQEAWTQFNN 658
           PDK+QQKGA   QKY AEKVFD+L+EAW +FN+
Sbjct: 853 PDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNS 885


>AT4G12770.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr4:7506736-7511408 REVERSE LENGTH=891
          Length = 891

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 76/93 (81%)

Query: 566 VIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQRALLCLH 625
            +D +I++W  GKEGN+R+LLSTLQ+VLWP  GW+PV L D+I G +VK+ Y++A LC+H
Sbjct: 795 TLDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIH 854

Query: 626 PDKLQQKGATSDQKYTAEKVFDILQEAWTQFNN 658
           PDK+QQKGA   QKY AEKVFD+L+EAW +FN+
Sbjct: 855 PDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNS 887


>AT4G12780.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr4:7512200-7516655 FORWARD LENGTH=904
          Length = 904

 Score =  140 bits (353), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 80/100 (80%), Gaps = 1/100 (1%)

Query: 560 EKQQLQV-IDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQ 618
           EK ++ V +D +I++W  GKEGN+R+LLSTLQ+VLWP  GW+PV L D+I   +VK+ Y+
Sbjct: 801 EKDRIGVTLDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYR 860

Query: 619 RALLCLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQFNN 658
           +A LC+HPDK+QQKGA   QKY AEKVFD+L+EAW +FN+
Sbjct: 861 KATLCIHPDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNS 900


>AT4G12780.2 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr4:7512200-7516655 FORWARD LENGTH=894
          Length = 894

 Score =  139 bits (350), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 75/93 (80%)

Query: 566 VIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQRALLCLH 625
            +D +I++W  GKEGN+R+LLSTLQ+VLWP  GW+PV L D+I   +VK+ Y++A LC+H
Sbjct: 798 TLDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKATLCIH 857

Query: 626 PDKLQQKGATSDQKYTAEKVFDILQEAWTQFNN 658
           PDK+QQKGA   QKY AEKVFD+L+EAW +FN+
Sbjct: 858 PDKVQQKGANLQQKYIAEKVFDMLKEAWNKFNS 890


>AT1G21660.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr1:7605924-7608835 FORWARD LENGTH=523
          Length = 523

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 79/101 (78%)

Query: 557 QNQEKQQLQVIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRS 616
           Q Q  +  + +D +I++W+ GKEGNMR+LLS+L  VLWPG GW+ V + D+I  +AVK+ 
Sbjct: 418 QEQRTRISETVDTEIRRWATGKEGNMRALLSSLHIVLWPGCGWEAVSITDLITSSAVKKV 477

Query: 617 YQRALLCLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQFN 657
           Y++A L +HPDK+QQKGAT +QKY AEKVFDIL+EAW +FN
Sbjct: 478 YRKATLYVHPDKVQQKGATLEQKYIAEKVFDILKEAWNKFN 518


>AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein |
            chr1:28261004-28266124 FORWARD LENGTH=1448
          Length = 1448

 Score =  127 bits (319), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 77/100 (77%)

Query: 557  QNQEKQQLQVIDNKIQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRS 616
            Q +  +  + +D  +++WS GKE N+R+L+STLQ++L   SGWKP+PL D++   +V+++
Sbjct: 1344 QTERNRLAEALDADVKRWSSGKENNLRALISTLQYILGAESGWKPIPLTDLVSSASVRKA 1403

Query: 617  YQRALLCLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQF 656
            Y++A L +HPDKLQQ+GA++ QKY  EKVFD+L+EAW +F
Sbjct: 1404 YRKATLYVHPDKLQQRGASTQQKYICEKVFDLLKEAWNKF 1443


>AT1G30280.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr1:10662851-10664570 REVERSE LENGTH=455
          Length = 455

 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 1/87 (1%)

Query: 571 IQQWSKGKEGNMRSLLSTLQHVLWPGSGWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQ 630
           I+ W  GKE N+R LLSTL HVLW  S W  +PL ++ +G+ VK++YQRA LCLHPDKLQ
Sbjct: 361 IRIWLTGKETNIRLLLSTLHHVLWSNSNWDSIPLANLRDGSQVKKAYQRARLCLHPDKLQ 420

Query: 631 QKGATSD-QKYTAEKVFDILQEAWTQF 656
           Q+G TS  QK  A +VF ILQEAW  +
Sbjct: 421 QRGGTSPIQKSVASRVFAILQEAWAVY 447