Miyakogusa Predicted Gene

Lj5g3v2293640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2293640.1 Non Chatacterized Hit- tr|I3SDB6|I3SDB6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,93.52,0,CDP-OH_P_transf,CDP-alcohol phosphatidyltransferase;
pgsA: CDP-diacylglycerol--glycerol-3-phosphate ,CUFF.57240.1
         (290 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39290.1 | Symbols: PGPS1, PGP1, PGS1 | phosphatidylglycerolp...   273   1e-73
AT3G55030.1 | Symbols: PGPS2 | phosphatidylglycerolphosphate syn...   268   4e-72
AT4G04870.1 | Symbols: CLS | cardiolipin synthase | chr4:2461904...    54   2e-07

>AT2G39290.1 | Symbols: PGPS1, PGP1, PGS1 |
           phosphatidylglycerolphosphate synthase 1 |
           chr2:16407274-16408840 FORWARD LENGTH=296
          Length = 296

 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 138/197 (70%), Positives = 157/197 (79%), Gaps = 3/197 (1%)

Query: 94  KLLTLPTILTLGRVAAVPLLVATFYMDGWRGXXXXXXXXXXXXXXDWLDGYIARKMKLKS 153
           K+LTLPT+LTLGRVAAVPLLVATFY+D W G              DWLDGY+ARKM+L S
Sbjct: 103 KVLTLPTVLTLGRVAAVPLLVATFYVDSWWGTTATTSIFIAAAITDWLDGYLARKMRLGS 162

Query: 154 SFGAFLDPVADKLMVAATLVLLCTRPLTVDVFGQAPWLLTLPSIAIIGREITMSAVREWA 213
           +FGAFLDPVADKLMVAATL+LLCT+P+ V   G  PWLLT+PSIAIIGREITMSAVREWA
Sbjct: 163 AFGAFLDPVADKLMVAATLILLCTKPIQVAELGPLPWLLTVPSIAIIGREITMSAVREWA 222

Query: 214 ASQDSKLLEAVAVNNLGKWKTASQMTALTILLATRDCSNXXXXXXXXXXXXLLYTSAGLA 273
           ASQ+ KLLEAVAVNNLGKWKTA+QMTALTILLA+RD +             LLY SAGL+
Sbjct: 223 ASQNGKLLEAVAVNNLGKWKTATQMTALTILLASRDSN---VGWLVASGAGLLYVSAGLS 279

Query: 274 IWSLVIYMRKIWKVLLR 290
           +WSL +YMRKIWKVL++
Sbjct: 280 VWSLAVYMRKIWKVLMK 296


>AT3G55030.1 | Symbols: PGPS2 | phosphatidylglycerolphosphate
           synthase 2 | chr3:20396860-20398224 FORWARD LENGTH=233
          Length = 233

 Score =  268 bits (684), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 137/198 (69%), Positives = 156/198 (78%), Gaps = 3/198 (1%)

Query: 93  SKLLTLPTILTLGRVAAVPLLVATFYMDGWRGXXXXXXXXXXXXXXDWLDGYIARKMKLK 152
           SK++TLPT+LTLGRVAAVP+LVATFY+D W G              DWLDGYIARKM+L 
Sbjct: 38  SKVITLPTVLTLGRVAAVPILVATFYVDCWWGRTATTSIFIAAAITDWLDGYIARKMRLG 97

Query: 153 SSFGAFLDPVADKLMVAATLVLLCTRPLTVDVFGQAPWLLTLPSIAIIGREITMSAVREW 212
           S FGAFLDPVADKLMVAATL+LLCT+P+   V G  PWL+T+PSIAIIGREITMSAVREW
Sbjct: 98  SEFGAFLDPVADKLMVAATLILLCTKPMVAVVLGPVPWLVTVPSIAIIGREITMSAVREW 157

Query: 213 AASQDSKLLEAVAVNNLGKWKTASQMTALTILLATRDCSNXXXXXXXXXXXXLLYTSAGL 272
           AASQ+ KL EAVAVN+LGKWKTA+QM ALTILLA+RD S             LLY SAGL
Sbjct: 158 AASQNGKLSEAVAVNSLGKWKTATQMIALTILLASRDSS---FERLLPSGIGLLYVSAGL 214

Query: 273 AIWSLVIYMRKIWKVLLR 290
           +IWSLV+YMRKIW+VLL+
Sbjct: 215 SIWSLVVYMRKIWRVLLK 232


>AT4G04870.1 | Symbols: CLS | cardiolipin synthase |
           chr4:2461904-2464004 REVERSE LENGTH=341
          Length = 341

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 95  LLTLPTILTLGRVAAVPLLVATFYMDGWRGXXXXXXXXXXXXXXDWLDGYIARKMKLKSS 154
            + +P ++++ R+ + P+L   ++M                   DWLDGY+AR+MK+ S 
Sbjct: 141 FVNVPNMISMARLVSGPVL---WWMISNEMYSSAFLGLAVSGASDWLDGYVARRMKINSV 197

Query: 155 FGAFLDPVADKLMVAATLVLLCTRPL 180
            G++LDP+ADK+++    V +  + L
Sbjct: 198 VGSYLDPLADKVLIGCVAVAMVQKDL 223