Miyakogusa Predicted Gene

Lj5g3v2292490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2292490.1 Non Chatacterized Hit- tr|I1NJ83|I1NJ83_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,79.76,0,cyoE_ctaB: protoheme IX farnesyltransferase,Protohaem IX
farnesyltransferase; seg,NULL; UbiA,UbiA pr,CUFF.60846.1
         (407 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44520.1 | Symbols: COX10 | cytochrome c oxidase 10 | chr2:18...   496   e-140

>AT2G44520.1 | Symbols: COX10 | cytochrome c oxidase 10 |
           chr2:18379660-18381731 FORWARD LENGTH=431
          Length = 431

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/354 (68%), Positives = 286/354 (80%), Gaps = 14/354 (3%)

Query: 52  LVSLTRHYGTCYWELSKARLSMLVVATSGTGFVLGS-TSAVDLSGLSWTCLGTMMVSASA 110
           L  L  HY  CYWELSKA+LSMLVVATSGTG++LG+  +A+   GL +TC GTMM++ASA
Sbjct: 87  LAGLGHHYARCYWELSKAKLSMLVVATSGTGYILGTGNAAISFPGLCYTCAGTMMIAASA 146

Query: 111 SSLNQVFETNNDAKMKRTCQRPLPSGRISIPHAVAWASSVGLGGTALLATQTNMLAAGLA 170
           +SLNQ+FE +ND+KMKRT  RPLPSGRIS+PHAVAWA+  G  G  LLA++TNMLAAGLA
Sbjct: 147 NSLNQIFEISNDSKMKRTMLRPLPSGRISVPHAVAWATIAGASGACLLASKTNMLAAGLA 206

Query: 171 ASNLVLYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWAAASGDISLNGWILPAALYFWQL 230
           ++NLVLYAFVYTPLKQ+HP+NTWVGA+VGAIPPLLGWAAASG IS N  ILPAALYFWQ+
Sbjct: 207 SANLVLYAFVYTPLKQLHPINTWVGAVVGAIPPLLGWAAASGQISYNSMILPAALYFWQI 266

Query: 231 PHFMALAYMCRDDYAAGGFKMYSLADASGRRTALVALRNSIYLIPLGFLAYDWGMTTGWF 290
           PHFMALA++CR+DYAAGG+KM SL D SG+R A VALRN  Y+IPLGF+AYDWG+T+ WF
Sbjct: 267 PHFMALAHLCRNDYAAGGYKMLSLFDPSGKRIAAVALRNCFYMIPLGFIAYDWGLTSSWF 326

Query: 291 CLESTVLTLAISAAAFSFYRDRTKEKARRMFHASLLYLPVFMSGLLVHRRS-DNQQFLEE 349
           CLEST+LTLAI+A AFSFYRDRT  KAR+MFHASLL+LPVFMSGLL+HR S DNQQ L E
Sbjct: 327 CLESTLLTLAIAATAFSFYRDRTMHKARKMFHASLLFLPVFMSGLLLHRVSNDNQQQLVE 386

Query: 350 NAKGFVKFXXXXXXXXXXXXNGDKKIKSRRPFQARSPVAYASIAPFPFLPAPSY 403
            A                  +G+ K + R+   A+ PVAYAS APFPFLPAPS+
Sbjct: 387 EAG------------LTNSVSGEVKTQRRKKRVAQPPVAYASAAPFPFLPAPSF 428