Miyakogusa Predicted Gene

Lj5g3v2291280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2291280.1 tr|G7IF28|G7IF28_MEDTR Transketolase OS=Medicago
truncatula GN=MTR_1g116120 PE=4 SV=1,95.92,0,no description,NULL;
TRANSKETOLASE,NULL; DEHYDROGENASE RELATED,NULL; Thiamin
diphosphate-binding fol,NODE_7223_length_329_cov_2982.668701.path1.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60750.1 | Symbols:  | Transketolase | chr3:22454004-22456824...   199   4e-52
AT2G45290.1 | Symbols:  | Transketolase | chr2:18672737-18675589...   198   6e-52
AT3G60750.2 | Symbols:  | Transketolase | chr3:22454004-22456824...   192   4e-50

>AT3G60750.1 | Symbols:  | Transketolase | chr3:22454004-22456824
           FORWARD LENGTH=741
          Length = 741

 Score =  199 bits (505), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 90/98 (91%), Positives = 93/98 (94%)

Query: 1   MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
           MGCAPM HILYDE+MRYNPKNP WFNRDRFVLSAGHGCML YALLHLAGYDSV+EEDLK+
Sbjct: 108 MGCAPMAHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLLYALLHLAGYDSVQEEDLKQ 167

Query: 61  FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
           FRQWGSKTPGHPENFET GIEVTTGPLGQGIAN VGLA
Sbjct: 168 FRQWGSKTPGHPENFETPGIEVTTGPLGQGIANAVGLA 205


>AT2G45290.1 | Symbols:  | Transketolase | chr2:18672737-18675589
           FORWARD LENGTH=741
          Length = 741

 Score =  198 bits (504), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 88/98 (89%), Positives = 92/98 (93%)

Query: 1   MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
           MGCAPM HILYDE+M+YNPKNP WFNRDRFVLSAGHGCMLQYALLHLAGYDSV+EEDLK 
Sbjct: 108 MGCAPMSHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVREEDLKS 167

Query: 61  FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
           FRQWGSKTPGHPENFET G+E TTGPLGQGIAN VGLA
Sbjct: 168 FRQWGSKTPGHPENFETPGVEATTGPLGQGIANAVGLA 205


>AT3G60750.2 | Symbols:  | Transketolase | chr3:22454004-22456824
           FORWARD LENGTH=740
          Length = 740

 Score =  192 bits (488), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 89/98 (90%), Positives = 92/98 (93%), Gaps = 1/98 (1%)

Query: 1   MGCAPMGHILYDEIMRYNPKNPSWFNRDRFVLSAGHGCMLQYALLHLAGYDSVKEEDLKE 60
           MGCAPM HILYDE+MRYNPKNP WFNRDRFVLSAGHGCML YALLHLAGYDSV +EDLK+
Sbjct: 108 MGCAPMAHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLLYALLHLAGYDSV-QEDLKQ 166

Query: 61  FRQWGSKTPGHPENFETYGIEVTTGPLGQGIANGVGLA 98
           FRQWGSKTPGHPENFET GIEVTTGPLGQGIAN VGLA
Sbjct: 167 FRQWGSKTPGHPENFETPGIEVTTGPLGQGIANAVGLA 204